Query psy767
Match_columns 902
No_of_seqs 617 out of 3656
Neff 9.3
Searched_HMMs 29240
Date Sat Aug 17 00:25:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy767.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/767hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xpi_A Anaphase-promoting comp 100.0 1.2E-29 3.9E-34 301.9 35.2 451 53-639 63-582 (597)
2 2xpi_A Anaphase-promoting comp 100.0 1.8E-29 6.2E-34 300.2 31.7 439 41-589 82-580 (597)
3 4g26_A Pentatricopeptide repea 100.0 1.4E-27 4.8E-32 274.7 25.6 195 77-359 19-223 (501)
4 4g26_A Pentatricopeptide repea 99.9 4.4E-27 1.5E-31 270.5 20.0 188 44-277 27-223 (501)
5 1w3b_A UDP-N-acetylglucosamine 99.9 7.2E-19 2.5E-23 196.8 37.2 367 89-549 5-380 (388)
6 1w3b_A UDP-N-acetylglucosamine 99.8 5.2E-19 1.8E-23 198.0 31.8 371 53-520 9-387 (388)
7 2gw1_A Mitochondrial precursor 99.8 4.7E-16 1.6E-20 180.3 33.4 402 83-589 6-479 (514)
8 2y4t_A DNAJ homolog subfamily 99.7 5.6E-16 1.9E-20 176.6 30.3 307 41-416 24-364 (450)
9 2y4t_A DNAJ homolog subfamily 99.7 3E-15 1E-19 170.6 35.2 335 81-544 24-364 (450)
10 2gw1_A Mitochondrial precursor 99.7 3.5E-16 1.2E-20 181.4 26.7 413 43-544 6-484 (514)
11 3spa_A Mtrpol, DNA-directed RN 99.7 7E-18 2.4E-22 198.4 9.7 156 82-243 126-286 (1134)
12 3fp2_A TPR repeat-containing p 99.7 5.9E-14 2E-18 163.7 36.3 435 40-536 22-491 (537)
13 3spa_A Mtrpol, DNA-directed RN 99.7 7.6E-17 2.6E-21 189.7 10.7 130 117-286 126-258 (1134)
14 3fp2_A TPR repeat-containing p 99.6 2.9E-14 9.9E-19 166.3 27.5 387 19-499 35-492 (537)
15 3ieg_A DNAJ homolog subfamily 99.6 2.3E-12 7.9E-17 141.0 35.9 306 118-541 3-338 (359)
16 3ieg_A DNAJ homolog subfamily 99.6 7.5E-13 2.6E-17 145.0 30.8 198 83-292 3-216 (359)
17 1b89_A Protein (clathrin heavy 99.6 1.4E-13 4.7E-18 151.3 23.4 182 55-283 15-196 (449)
18 3hym_B Cell division cycle pro 99.6 1.2E-12 4.2E-17 141.6 30.1 285 79-416 18-305 (330)
19 1fch_A Peroxisomal targeting s 99.5 9.3E-13 3.2E-17 145.4 23.9 127 53-189 35-162 (368)
20 3mkr_A Coatomer subunit epsilo 99.5 1.7E-12 5.8E-17 138.8 24.4 273 90-433 6-287 (291)
21 4eqf_A PEX5-related protein; a 99.5 1.7E-12 5.8E-17 143.4 23.1 197 82-289 64-272 (365)
22 3hym_B Cell division cycle pro 99.5 1E-11 3.4E-16 134.4 28.3 265 115-440 19-299 (330)
23 2xm6_A Protein corresponding t 99.5 5.3E-10 1.8E-14 128.9 43.1 354 81-539 37-435 (490)
24 1fch_A Peroxisomal targeting s 99.5 2.6E-12 8.8E-17 141.8 22.6 283 94-436 36-355 (368)
25 1b89_A Protein (clathrin heavy 99.4 1.5E-12 5.2E-17 143.0 18.7 352 15-436 9-368 (449)
26 2ooe_A Cleavage stimulation fa 99.4 4.2E-10 1.4E-14 131.2 40.2 405 81-536 11-492 (530)
27 2xm6_A Protein corresponding t 99.4 2.2E-09 7.7E-14 123.7 44.0 367 101-589 25-433 (490)
28 4eqf_A PEX5-related protein; a 99.4 8.6E-12 2.9E-16 137.7 22.5 261 117-436 64-352 (365)
29 3cv0_A Peroxisome targeting si 99.4 1.6E-11 5.3E-16 132.7 23.8 272 82-437 20-312 (327)
30 1xi4_A Clathrin heavy chain; a 99.4 2.9E-09 9.8E-14 129.8 43.1 318 86-490 1052-1376(1630)
31 1xi4_A Clathrin heavy chain; a 99.4 1.1E-08 3.9E-13 124.7 47.7 374 87-564 989-1373(1630)
32 3mkr_A Coatomer subunit epsilo 99.4 4.1E-11 1.4E-15 128.0 21.9 246 22-292 12-263 (291)
33 3cv0_A Peroxisome targeting si 99.3 1.9E-11 6.4E-16 132.1 19.1 228 46-290 24-266 (327)
34 4g1t_A Interferon-induced prot 99.3 7.3E-10 2.5E-14 126.7 30.3 389 79-545 47-469 (472)
35 2ooe_A Cleavage stimulation fa 99.3 1.3E-09 4.4E-14 127.0 30.4 390 22-498 25-492 (530)
36 3uq3_A Heat shock protein STI1 99.2 5.1E-10 1.8E-14 116.0 22.5 222 119-406 6-235 (258)
37 2pl2_A Hypothetical conserved 99.2 4.8E-10 1.7E-14 114.0 19.8 199 80-290 2-211 (217)
38 3uq3_A Heat shock protein STI1 99.2 2.6E-09 8.8E-14 110.7 24.7 222 83-371 5-232 (258)
39 2ho1_A Type 4 fimbrial biogene 99.2 4.7E-09 1.6E-13 108.7 24.9 201 83-293 37-238 (252)
40 2vq2_A PILW, putative fimbrial 99.2 4.8E-09 1.6E-13 106.1 24.1 164 82-289 7-172 (225)
41 4g1t_A Interferon-induced prot 99.2 1.9E-08 6.5E-13 114.9 31.4 309 157-544 49-407 (472)
42 1xnf_A Lipoprotein NLPI; TPR, 99.1 1E-09 3.6E-14 115.1 18.5 182 96-289 18-202 (275)
43 2pl2_A Hypothetical conserved 99.1 1.9E-09 6.5E-14 109.5 19.0 208 116-405 3-212 (217)
44 3u4t_A TPR repeat-containing p 99.1 9.4E-09 3.2E-13 107.7 24.0 195 85-289 5-204 (272)
45 2ho1_A Type 4 fimbrial biogene 99.1 2E-08 7E-13 103.8 25.9 163 118-289 37-200 (252)
46 1ouv_A Conserved hypothetical 99.1 9E-08 3.1E-12 100.6 30.9 126 82-222 5-142 (273)
47 1ouv_A Conserved hypothetical 99.1 5E-08 1.7E-12 102.5 28.1 222 117-406 5-250 (273)
48 2q7f_A YRRB protein; TPR, prot 99.1 6.1E-09 2.1E-13 106.9 19.8 200 42-292 22-221 (243)
49 1xnf_A Lipoprotein NLPI; TPR, 99.1 4.5E-09 1.5E-13 110.2 18.8 244 135-434 16-269 (275)
50 2h6f_A Protein farnesyltransfe 99.1 2E-08 7E-13 111.0 24.7 247 83-389 97-364 (382)
51 2q7f_A YRRB protein; TPR, prot 99.0 1.3E-08 4.4E-13 104.4 19.3 163 82-289 22-184 (243)
52 2vq2_A PILW, putative fimbrial 99.0 9.6E-09 3.3E-13 103.8 18.0 202 41-256 6-209 (225)
53 3u4t_A TPR repeat-containing p 98.9 9.3E-08 3.2E-12 100.0 23.7 235 235-545 9-257 (272)
54 4a1s_A PINS, partner of inscut 98.9 1.9E-08 6.4E-13 112.5 18.2 131 83-220 48-209 (411)
55 2ond_A Cleavage stimulation fa 98.9 4.5E-07 1.5E-11 97.3 28.1 196 83-289 8-228 (308)
56 3e4b_A ALGK; tetratricopeptide 98.9 1.9E-08 6.4E-13 114.5 17.9 344 89-538 9-389 (452)
57 3ro2_A PINS homolog, G-protein 98.9 3.9E-08 1.3E-12 105.7 18.8 119 84-209 6-138 (338)
58 3sf4_A G-protein-signaling mod 98.9 3.8E-08 1.3E-12 109.4 19.3 123 80-209 6-142 (406)
59 3nf1_A KLC 1, kinesin light ch 98.9 4.4E-08 1.5E-12 104.4 18.1 205 80-290 24-304 (311)
60 2h6f_A Protein farnesyltransfe 98.9 1.1E-07 3.9E-12 105.0 21.8 236 119-416 98-354 (382)
61 4a1s_A PINS, partner of inscut 98.8 5.3E-08 1.8E-12 108.8 18.1 266 131-440 55-372 (411)
62 3sf4_A G-protein-signaling mod 98.8 1.2E-07 4.1E-12 105.3 20.8 275 116-440 7-336 (406)
63 3ro2_A PINS homolog, G-protein 98.8 1.7E-07 5.8E-12 100.6 20.7 282 161-536 7-332 (338)
64 3vtx_A MAMA; tetratricopeptide 98.8 3.3E-07 1.1E-11 89.7 20.9 165 82-291 4-168 (184)
65 3ulq_A Response regulator aspa 98.8 5.1E-08 1.8E-12 108.2 14.5 307 54-406 23-367 (383)
66 3nf1_A KLC 1, kinesin light ch 98.8 2.2E-07 7.5E-12 98.9 18.9 168 118-291 27-222 (311)
67 4e6h_A MRNA 3'-END-processing 98.8 2.9E-05 9.9E-10 91.7 38.4 424 79-552 62-584 (679)
68 2ond_A Cleavage stimulation fa 98.7 1.5E-06 5E-11 93.2 25.2 202 80-292 47-269 (308)
69 4abn_A Tetratricopeptide repea 98.7 2.2E-07 7.5E-12 106.4 19.1 217 139-405 83-319 (474)
70 3vtx_A MAMA; tetratricopeptide 98.7 1E-06 3.6E-11 86.1 21.0 163 117-371 4-166 (184)
71 3as5_A MAMA; tetratricopeptide 98.7 4.1E-07 1.4E-11 88.3 17.9 163 84-291 9-171 (186)
72 4abn_A Tetratricopeptide repea 98.7 2.9E-07 9.8E-12 105.4 18.1 199 81-290 100-318 (474)
73 3as5_A MAMA; tetratricopeptide 98.6 6.6E-07 2.3E-11 86.8 16.2 165 43-222 8-172 (186)
74 1hz4_A MALT regulatory protein 98.6 1.7E-05 5.8E-10 87.1 28.9 273 131-498 21-322 (373)
75 1hz4_A MALT regulatory protein 98.6 9.5E-06 3.2E-10 89.2 26.3 197 88-290 19-241 (373)
76 3q15_A PSP28, response regulat 98.6 3.5E-06 1.2E-10 93.1 22.7 230 133-406 110-364 (378)
77 3e4b_A ALGK; tetratricopeptide 98.6 1.3E-06 4.3E-11 99.3 18.3 305 93-499 45-388 (452)
78 3q15_A PSP28, response regulat 98.5 7.3E-06 2.5E-10 90.5 23.9 312 156-535 7-364 (378)
79 3ulq_A Response regulator aspa 98.5 1.9E-06 6.4E-11 95.4 18.7 227 89-371 109-364 (383)
80 3edt_B KLC 2, kinesin light ch 98.5 9.4E-07 3.2E-11 92.3 15.1 166 95-291 13-196 (283)
81 3edt_B KLC 2, kinesin light ch 98.5 5.2E-07 1.8E-11 94.3 13.1 236 52-291 10-279 (283)
82 4gyw_A UDP-N-acetylglucosamine 98.5 2E-06 6.9E-11 102.7 18.7 164 82-290 8-171 (723)
83 2fo7_A Synthetic consensus TPR 98.5 3.8E-06 1.3E-10 76.3 16.3 129 85-222 3-131 (136)
84 4i17_A Hypothetical protein; T 98.5 1.7E-05 6E-10 80.3 22.8 197 81-293 5-209 (228)
85 4i17_A Hypothetical protein; T 98.5 5.7E-06 1.9E-10 83.9 19.0 195 158-440 6-209 (228)
86 2fo7_A Synthetic consensus TPR 98.4 6.6E-06 2.3E-10 74.7 15.6 123 131-291 8-130 (136)
87 3mv2_B Coatomer subunit epsilo 98.4 3.4E-05 1.2E-09 81.2 21.7 200 178-441 85-306 (310)
88 1qqe_A Vesicular transport pro 98.3 2.2E-05 7.5E-10 83.2 19.7 218 139-417 32-276 (292)
89 4gyw_A UDP-N-acetylglucosamine 98.3 2.8E-06 9.6E-11 101.5 13.8 165 40-221 6-172 (723)
90 4e6h_A MRNA 3'-END-processing 98.2 0.0036 1.2E-07 73.8 37.8 443 98-631 47-568 (679)
91 1qqe_A Vesicular transport pro 98.2 2E-05 7E-10 83.5 17.0 200 84-291 38-267 (292)
92 3mv2_B Coatomer subunit epsilo 98.2 9.4E-05 3.2E-09 77.8 21.2 239 22-294 26-283 (310)
93 3urz_A Uncharacterized protein 98.1 8.9E-05 3E-09 74.1 18.5 172 83-268 4-194 (208)
94 3qky_A Outer membrane assembly 98.1 2.3E-05 8E-10 81.3 14.4 172 261-499 12-225 (261)
95 3rjv_A Putative SEL1 repeat pr 98.0 0.00036 1.2E-08 69.9 20.5 177 100-294 3-198 (212)
96 3qou_A Protein YBBN; thioredox 98.0 0.00011 3.9E-09 77.5 17.5 131 156-289 114-244 (287)
97 2yhc_A BAMD, UPF0169 lipoprote 98.0 0.00025 8.7E-09 71.6 18.9 160 131-294 11-214 (225)
98 2yhc_A BAMD, UPF0169 lipoprote 98.0 0.00026 8.8E-09 71.6 18.9 62 475-537 153-214 (225)
99 3qky_A Outer membrane assembly 98.0 0.00027 9.2E-09 73.1 19.4 170 117-293 14-224 (261)
100 2ifu_A Gamma-SNAP; membrane fu 98.0 0.00017 5.8E-09 76.9 17.3 152 137-289 4-180 (307)
101 1hh8_A P67PHOX, NCF-2, neutrop 97.9 0.00032 1.1E-08 69.8 18.1 133 83-226 6-153 (213)
102 3qou_A Protein YBBN; thioredox 97.9 0.00011 3.7E-09 77.6 15.0 163 117-289 116-280 (287)
103 2r5s_A Uncharacterized protein 97.9 8.6E-05 2.9E-09 71.8 13.1 123 163-289 10-133 (176)
104 2vsy_A XCC0866; transferase, g 97.9 0.00015 5.2E-09 84.7 17.2 154 56-224 2-158 (568)
105 1na0_A Designed protein CTPR3; 97.9 0.00032 1.1E-08 62.3 15.7 115 83-206 9-123 (125)
106 2vsy_A XCC0866; transferase, g 97.9 0.00019 6.5E-09 83.9 17.4 152 96-292 2-156 (568)
107 2pzi_A Probable serine/threoni 97.9 6.8E-05 2.3E-09 89.6 13.6 184 94-290 402-602 (681)
108 2r5s_A Uncharacterized protein 97.9 9E-05 3.1E-09 71.7 11.8 156 131-290 13-170 (176)
109 3urz_A Uncharacterized protein 97.8 0.00044 1.5E-08 68.9 16.5 155 131-292 11-185 (208)
110 2pzi_A Probable serine/threoni 97.8 0.00026 8.9E-09 84.6 16.7 151 135-290 402-560 (681)
111 1hh8_A P67PHOX, NCF-2, neutrop 97.8 0.00025 8.6E-09 70.5 14.1 130 43-189 6-151 (213)
112 2ifu_A Gamma-SNAP; membrane fu 97.8 0.0004 1.4E-08 74.0 16.5 188 96-291 4-222 (307)
113 2vyi_A SGTA protein; chaperone 97.7 0.00061 2.1E-08 61.0 14.9 120 82-210 11-130 (131)
114 1a17_A Serine/threonine protei 97.7 0.00063 2.2E-08 64.2 15.6 129 83-220 13-143 (166)
115 2lni_A Stress-induced-phosphop 97.7 0.00049 1.7E-08 62.1 13.9 121 79-208 12-132 (133)
116 1na0_A Designed protein CTPR3; 97.7 0.00078 2.7E-08 59.7 14.8 97 118-222 9-105 (125)
117 2uy1_A Cleavage stimulation fa 97.7 0.0052 1.8E-07 70.0 24.9 214 246-535 196-412 (493)
118 3rjv_A Putative SEL1 repeat pr 97.7 0.002 6.9E-08 64.3 18.8 164 81-259 16-198 (212)
119 3dra_A Protein farnesyltransfe 97.7 0.0098 3.4E-07 62.8 24.9 223 94-373 43-285 (306)
120 3u3w_A Transcriptional activat 97.7 0.0024 8E-08 67.3 20.2 160 131-290 82-263 (293)
121 4ga2_A E3 SUMO-protein ligase 97.7 9.2E-05 3.1E-09 69.7 8.2 118 93-221 7-127 (150)
122 1a17_A Serine/threonine protei 97.6 0.00097 3.3E-08 62.9 15.0 90 131-222 20-109 (166)
123 2qfc_A PLCR protein; TPR, HTH, 97.6 0.014 4.7E-07 61.3 25.1 172 86-289 78-262 (293)
124 3u3w_A Transcriptional activat 97.6 0.0018 6.2E-08 68.2 18.1 165 86-256 78-264 (293)
125 3gw4_A Uncharacterized protein 97.6 0.00046 1.6E-08 67.8 12.3 155 135-290 3-173 (203)
126 2e2e_A Formate-dependent nitri 97.6 0.00042 1.4E-08 66.8 11.7 122 53-188 20-144 (177)
127 4gco_A Protein STI-1; structur 97.6 0.0011 3.7E-08 60.1 13.7 101 84-194 14-114 (126)
128 4ga2_A E3 SUMO-protein ligase 97.6 8.6E-05 2.9E-09 69.9 6.4 140 53-209 7-149 (150)
129 1p5q_A FKBP52, FK506-binding p 97.6 0.00036 1.2E-08 75.4 12.1 131 82-220 146-291 (336)
130 3gyz_A Chaperone protein IPGC; 97.6 0.0007 2.4E-08 63.6 12.5 104 82-195 35-138 (151)
131 2c2l_A CHIP, carboxy terminus 97.5 0.0032 1.1E-07 65.9 18.9 191 81-292 2-198 (281)
132 3gw4_A Uncharacterized protein 97.5 0.00076 2.6E-08 66.1 13.2 156 94-256 3-174 (203)
133 2vyi_A SGTA protein; chaperone 97.5 0.0013 4.5E-08 58.7 13.3 90 131-222 19-108 (131)
134 2vgx_A Chaperone SYCD; alterna 97.5 0.00062 2.1E-08 63.7 11.1 98 83-188 21-118 (148)
135 1elw_A TPR1-domain of HOP; HOP 97.4 0.0034 1.2E-07 54.7 15.2 100 82-189 3-102 (118)
136 3upv_A Heat shock protein STI1 97.4 0.0022 7.5E-08 57.6 13.9 98 83-188 4-101 (126)
137 2fbn_A 70 kDa peptidylprolyl i 97.4 0.00082 2.8E-08 66.1 11.9 159 50-222 11-185 (198)
138 2lni_A Stress-induced-phosphop 97.4 0.0014 4.9E-08 58.9 12.6 98 117-222 15-112 (133)
139 2qfc_A PLCR protein; TPR, HTH, 97.4 0.0091 3.1E-07 62.7 20.2 25 265-289 197-221 (293)
140 2c2l_A CHIP, carboxy terminus 97.4 0.0052 1.8E-07 64.3 17.7 96 158-290 3-98 (281)
141 2e2e_A Formate-dependent nitri 97.4 0.0013 4.3E-08 63.3 11.9 123 94-225 21-146 (177)
142 1elr_A TPR2A-domain of HOP; HO 97.3 0.0018 6E-08 58.0 12.2 113 83-204 4-122 (131)
143 2uy1_A Cleavage stimulation fa 97.3 0.016 5.6E-07 65.9 22.8 340 57-440 28-413 (493)
144 4gco_A Protein STI-1; structur 97.3 0.0028 9.6E-08 57.3 13.2 91 131-223 20-110 (126)
145 3dra_A Protein farnesyltransfe 97.3 0.0055 1.9E-07 64.8 17.3 203 84-292 68-286 (306)
146 2fbn_A 70 kDa peptidylprolyl i 97.3 0.00013 4.5E-09 72.0 4.4 174 7-189 2-187 (198)
147 3gyz_A Chaperone protein IPGC; 97.3 0.0016 5.3E-08 61.2 11.6 97 119-223 37-133 (151)
148 3q49_B STIP1 homology and U bo 97.3 0.0037 1.3E-07 56.7 14.0 100 81-188 7-106 (137)
149 2dba_A Smooth muscle cell asso 97.3 0.0051 1.8E-07 56.4 15.0 100 80-188 25-128 (148)
150 2kck_A TPR repeat; tetratricop 97.3 0.0016 5.5E-08 56.4 10.8 97 84-188 7-106 (112)
151 3q7a_A Farnesyltransferase alp 97.2 0.068 2.3E-06 57.1 24.7 117 86-211 57-176 (349)
152 2kck_A TPR repeat; tetratricop 97.2 0.002 7E-08 55.7 10.9 92 131-224 13-107 (112)
153 2xcb_A PCRH, regulatory protei 97.2 0.0031 1.1E-07 58.2 12.6 97 84-188 19-115 (142)
154 2vgx_A Chaperone SYCD; alterna 97.2 0.00093 3.2E-08 62.5 8.9 90 131-222 28-117 (148)
155 4f3v_A ESX-1 secretion system 97.2 0.0071 2.4E-07 62.6 16.2 63 348-413 173-240 (282)
156 4f3v_A ESX-1 secretion system 97.2 0.0086 2.9E-07 62.0 16.7 196 92-293 16-237 (282)
157 1elw_A TPR1-domain of HOP; HOP 97.2 0.0053 1.8E-07 53.5 13.3 92 131-224 11-102 (118)
158 1p5q_A FKBP52, FK506-binding p 97.2 0.0038 1.3E-07 67.3 14.4 129 118-290 147-291 (336)
159 3sz7_A HSC70 cochaperone (SGT) 97.1 0.0042 1.4E-07 58.8 12.9 99 82-188 10-108 (164)
160 3q49_B STIP1 homology and U bo 97.1 0.007 2.4E-07 54.8 13.5 99 116-222 7-105 (137)
161 3upv_A Heat shock protein STI1 97.1 0.0056 1.9E-07 54.8 12.5 90 131-222 11-100 (126)
162 2xcb_A PCRH, regulatory protei 97.1 0.0048 1.6E-07 56.9 12.0 90 131-222 25-114 (142)
163 4gcn_A Protein STI-1; structur 97.0 0.0072 2.5E-07 54.5 12.6 107 83-198 8-120 (127)
164 3sz7_A HSC70 cochaperone (SGT) 97.0 0.007 2.4E-07 57.2 12.9 99 117-223 10-108 (164)
165 1hxi_A PEX5, peroxisome target 97.0 0.0043 1.5E-07 55.6 10.7 95 86-188 20-114 (121)
166 4b4t_Q 26S proteasome regulato 96.9 0.018 6E-07 64.0 17.7 200 131-404 11-242 (434)
167 1elr_A TPR2A-domain of HOP; HO 96.9 0.0049 1.7E-07 54.9 10.2 91 131-222 11-107 (131)
168 4b4t_Q 26S proteasome regulato 96.8 0.033 1.1E-06 61.8 18.8 170 128-371 59-241 (434)
169 2xev_A YBGF; tetratricopeptide 96.8 0.02 6.8E-07 51.1 13.8 93 88-188 7-105 (129)
170 1hxi_A PEX5, peroxisome target 96.8 0.0073 2.5E-07 54.0 10.5 91 131-223 24-114 (121)
171 2dba_A Smooth muscle cell asso 96.8 0.023 7.8E-07 51.9 14.1 61 158-220 27-91 (148)
172 3n71_A Histone lysine methyltr 96.8 0.0057 1.9E-07 69.3 11.7 152 113-292 294-463 (490)
173 3ro3_A PINS homolog, G-protein 96.7 0.0053 1.8E-07 56.9 9.7 132 83-220 9-155 (164)
174 4gcn_A Protein STI-1; structur 96.7 0.0078 2.7E-07 54.3 10.1 90 131-221 15-110 (127)
175 3ro3_A PINS homolog, G-protein 96.7 0.0093 3.2E-07 55.2 10.9 130 131-291 16-156 (164)
176 3k9i_A BH0479 protein; putativ 96.6 0.0037 1.3E-07 55.4 6.9 87 95-188 2-90 (117)
177 1kt0_A FKBP51, 51 kDa FK506-bi 96.5 0.018 6.3E-07 64.8 13.9 130 83-221 268-413 (457)
178 3rkv_A Putative peptidylprolyl 96.5 0.022 7.5E-07 53.5 12.2 105 82-195 10-131 (162)
179 3q7a_A Farnesyltransferase alp 96.5 0.05 1.7E-06 58.2 16.0 169 27-210 72-258 (349)
180 2xev_A YBGF; tetratricopeptide 96.4 0.024 8.3E-07 50.5 11.6 90 131-223 9-105 (129)
181 1wao_1 Serine/threonine protei 96.4 0.0065 2.2E-07 68.9 9.4 120 91-219 14-135 (477)
182 1ihg_A Cyclophilin 40; ppiase 96.3 0.029 9.8E-07 61.2 13.4 123 84-215 224-362 (370)
183 2l6j_A TPR repeat-containing p 96.3 0.0064 2.2E-07 52.6 6.7 95 117-220 3-104 (111)
184 3n71_A Histone lysine methyltr 96.3 0.022 7.4E-07 64.5 12.3 93 169-289 319-418 (490)
185 1wao_1 Serine/threonine protei 96.2 0.0068 2.3E-07 68.8 8.0 121 131-289 13-135 (477)
186 3dss_A Geranylgeranyl transfer 96.2 0.32 1.1E-05 51.6 20.3 132 83-221 26-172 (331)
187 1kt0_A FKBP51, 51 kDa FK506-bi 96.1 0.05 1.7E-06 61.2 14.0 97 119-223 269-380 (457)
188 3k9i_A BH0479 protein; putativ 96.0 0.019 6.6E-07 50.6 8.1 83 172-290 3-87 (117)
189 3rkv_A Putative peptidylprolyl 95.9 0.052 1.8E-06 50.8 11.5 93 131-224 18-127 (162)
190 3dss_A Geranylgeranyl transfer 95.9 0.36 1.2E-05 51.2 18.9 219 135-440 40-304 (331)
191 1ihg_A Cyclophilin 40; ppiase 95.9 0.051 1.7E-06 59.2 12.8 91 131-222 230-335 (370)
192 2hr2_A Hypothetical protein; a 95.9 0.073 2.5E-06 49.7 11.7 98 84-187 12-130 (159)
193 2if4_A ATFKBP42; FKBP-like, al 95.8 0.014 4.9E-07 62.7 7.8 148 83-257 179-327 (338)
194 2hr2_A Hypothetical protein; a 95.7 0.11 3.7E-06 48.5 12.4 99 160-290 12-128 (159)
195 2kat_A Uncharacterized protein 95.6 0.079 2.7E-06 46.2 10.5 81 100-188 2-82 (115)
196 2if4_A ATFKBP42; FKBP-like, al 95.6 0.015 5.1E-07 62.6 6.7 115 42-187 178-292 (338)
197 2l6j_A TPR repeat-containing p 95.5 0.017 6E-07 49.8 5.7 95 81-183 2-102 (111)
198 1na3_A Designed protein CTPR2; 95.4 0.13 4.4E-06 42.2 10.7 81 118-206 9-89 (91)
199 1klx_A Cysteine rich protein B 95.2 0.28 9.7E-06 44.6 13.4 110 97-223 9-126 (138)
200 1na3_A Designed protein CTPR2; 95.2 0.13 4.5E-06 42.1 10.2 83 82-172 8-90 (91)
201 3mkq_A Coatomer beta'-subunit; 95.0 0.37 1.3E-05 58.1 17.4 153 92-289 608-761 (814)
202 1dce_A Protein (RAB geranylger 94.9 1.3 4.3E-05 51.1 20.8 186 83-279 25-241 (567)
203 2kat_A Uncharacterized protein 94.7 0.19 6.5E-06 43.6 10.3 79 142-222 3-81 (115)
204 1klx_A Cysteine rich protein B 94.3 0.27 9.3E-06 44.7 10.8 78 137-222 8-89 (138)
205 3ma5_A Tetratricopeptide repea 94.3 0.18 6.3E-06 42.7 8.9 64 117-187 6-69 (100)
206 3qwp_A SET and MYND domain-con 93.9 0.24 8.2E-06 54.9 11.0 89 131-219 294-396 (429)
207 3qww_A SET and MYND domain-con 93.7 0.25 8.7E-06 54.7 10.9 92 171-290 310-408 (433)
208 1zu2_A Mitochondrial import re 93.5 0.13 4.4E-06 48.0 6.7 102 94-205 13-135 (158)
209 3ma5_A Tetratricopeptide repea 93.1 0.38 1.3E-05 40.7 8.7 65 81-152 5-69 (100)
210 3qwp_A SET and MYND domain-con 92.9 0.39 1.3E-05 53.2 10.8 97 166-290 294-397 (429)
211 1dce_A Protein (RAB geranylger 92.9 1.9 6.6E-05 49.5 17.0 117 140-292 45-172 (567)
212 3qww_A SET and MYND domain-con 92.7 0.43 1.5E-05 52.8 10.7 86 96-187 311-410 (433)
213 3mkq_A Coatomer beta'-subunit; 92.3 3 0.0001 50.1 18.5 143 86-289 632-774 (814)
214 2kc7_A BFR218_protein; tetratr 92.0 0.49 1.7E-05 39.5 8.0 58 131-189 7-65 (99)
215 3mkq_B Coatomer subunit alpha; 90.9 6.2 0.00021 37.2 14.7 49 131-185 12-60 (177)
216 1zu2_A Mitochondrial import re 90.8 0.33 1.1E-05 45.2 5.9 71 135-208 13-94 (158)
217 4agu_A Cyclin-dependent kinase 89.6 0.1 3.5E-06 55.0 1.6 36 851-886 267-303 (311)
218 2kc7_A BFR218_protein; tetratr 89.4 1.2 4.1E-05 37.0 8.0 81 89-185 6-87 (99)
219 3ly7_A Transcriptional activat 89.0 2.9 9.8E-05 44.6 12.1 63 228-292 276-338 (372)
220 3mkq_B Coatomer subunit alpha; 88.7 16 0.00055 34.3 16.7 104 236-372 12-115 (177)
221 3bee_A Putative YFRE protein; 87.1 2.7 9.1E-05 35.1 8.5 66 117-189 5-73 (93)
222 3bee_A Putative YFRE protein; 87.0 6.3 0.00022 32.7 10.9 67 80-154 3-73 (93)
223 1pc2_A Mitochondria fission pr 85.3 5.5 0.00019 36.5 10.2 84 140-225 14-102 (152)
224 1pc2_A Mitochondria fission pr 84.9 7.3 0.00025 35.7 10.8 91 100-200 15-110 (152)
225 3ubd_A Ribosomal protein S6 ki 84.5 0.64 2.2E-05 48.7 4.1 26 851-876 259-289 (304)
226 3hyh_A Carbon catabolite-derep 84.3 0.51 1.8E-05 48.6 3.2 23 851-873 245-267 (275)
227 4f9c_A Cell division cycle 7-r 83.9 0.25 8.6E-06 53.4 0.7 26 851-876 335-360 (361)
228 4aw0_A HPDK1, 3-phosphoinositi 83.3 0.96 3.3E-05 47.5 4.8 27 851-877 267-299 (311)
229 1wy6_A Hypothetical protein ST 82.9 15 0.00052 32.7 11.2 137 357-539 18-157 (172)
230 4b4t_P 26S proteasome regulato 82.4 63 0.0021 35.4 19.6 167 382-572 141-318 (445)
231 2ff4_A Probable regulatory pro 81.4 3.8 0.00013 44.4 8.9 117 80-197 109-248 (388)
232 2v5f_A Prolyl 4-hydroxylase su 81.0 10 0.00034 31.9 9.9 66 82-153 4-75 (104)
233 3ly7_A Transcriptional activat 80.6 6.4 0.00022 41.9 9.9 65 157-223 275-339 (372)
234 3mtl_A Cell division protein k 80.5 0.7 2.4E-05 48.9 2.6 30 851-880 264-293 (324)
235 4g31_A Eukaryotic translation 80.2 0.44 1.5E-05 49.9 0.9 27 851-877 262-288 (299)
236 4b99_A Mitogen-activated prote 79.4 0.47 1.6E-05 51.9 0.8 29 851-879 327-355 (398)
237 3nsz_A CK II alpha, casein kin 78.9 0.74 2.5E-05 48.7 2.1 28 851-878 302-329 (330)
238 1wy6_A Hypothetical protein ST 78.5 37 0.0013 30.3 13.6 136 136-296 19-157 (172)
239 2v5f_A Prolyl 4-hydroxylase su 78.3 10 0.00035 31.9 8.9 63 131-195 12-80 (104)
240 3fe3_A MAP/microtubule affinit 77.2 2.1 7.1E-05 45.4 5.0 28 851-878 247-274 (328)
241 3o0g_A Cell division protein k 76.3 0.68 2.3E-05 48.0 0.9 26 851-876 265-290 (292)
242 3oz6_A Mitogen-activated prote 74.4 1 3.4E-05 49.0 1.7 30 851-880 311-340 (388)
243 4exu_A Mitogen-activated prote 74.1 0.84 2.9E-05 49.4 0.9 30 851-880 306-335 (371)
244 1n11_A Ankyrin; clathrin, BAND 73.7 57 0.0019 35.3 16.0 266 131-435 18-299 (437)
245 4fhn_B Nucleoporin NUP120; pro 73.6 43 0.0015 41.8 16.5 163 235-428 818-988 (1139)
246 4fih_A Serine/threonine-protei 73.2 0.92 3.1E-05 48.4 0.9 26 851-876 306-331 (346)
247 3rp9_A Mitogen-activated prote 73.0 0.94 3.2E-05 50.6 1.0 29 851-879 379-407 (458)
248 3gbz_A Kinase, CMGC CDK; ssgci 72.7 1.1 3.6E-05 47.6 1.3 27 851-877 301-327 (329)
249 3e3p_A Protein kinase, putativ 72.5 0.97 3.3E-05 48.4 0.9 30 851-880 297-326 (360)
250 1n11_A Ankyrin; clathrin, BAND 72.4 1.1E+02 0.0038 32.9 18.6 73 660-733 325-400 (437)
251 4e7w_A Glycogen synthase kinas 72.3 1.1 3.9E-05 48.8 1.5 29 851-879 304-332 (394)
252 2r3i_A Cell division protein k 72.1 1.1 3.8E-05 46.4 1.3 30 851-880 266-295 (299)
253 3n9x_A Phosphotransferase; mal 72.0 1.1 3.8E-05 49.6 1.2 30 851-880 344-373 (432)
254 3u64_A Protein TP_0956; tetrat 72.0 14 0.00046 37.9 9.1 109 160-270 155-283 (301)
255 1wdy_A 2-5A-dependent ribonucl 71.9 26 0.0009 35.0 11.9 87 128-219 6-94 (285)
256 3niz_A Rhodanese family protei 71.7 1.1 3.7E-05 47.1 1.0 27 851-877 283-309 (311)
257 2fst_X Mitogen-activated prote 70.9 1.1 3.8E-05 48.3 0.9 29 851-879 294-322 (367)
258 1z57_A Dual specificity protei 70.5 0.99 3.4E-05 47.7 0.4 27 851-877 311-337 (339)
259 2pmi_A Negative RE, cyclin-dep 70.4 1.1 3.7E-05 47.2 0.7 30 851-880 276-305 (317)
260 3fpq_A Serine/threonine-protei 70.4 1 3.6E-05 46.7 0.5 23 851-873 265-287 (290)
261 1cm8_A Phosphorylated MAP kina 70.3 1.1 3.7E-05 48.5 0.6 29 851-879 290-318 (367)
262 2eu9_A Dual specificity protei 69.5 0.7 2.4E-05 49.3 -1.1 27 851-877 316-342 (355)
263 1v54_E Cytochrome C oxidase po 68.9 16 0.00054 30.7 7.1 63 139-202 25-87 (109)
264 3coi_A Mitogen-activated prote 68.5 1.3 4.6E-05 47.3 0.9 30 851-880 288-317 (353)
265 3pg1_A Mitogen-activated prote 68.1 1.4 4.7E-05 47.3 0.9 30 851-880 299-328 (362)
266 2vx3_A Dual specificity tyrosi 67.8 1.3 4.3E-05 48.1 0.5 26 851-876 355-380 (382)
267 1wak_A Serine/threonine-protei 67.3 1.6 5.6E-05 47.3 1.3 24 851-874 374-397 (397)
268 4gns_B Protein CSD3, chitin bi 67.2 21 0.00072 42.0 10.7 126 163-291 252-398 (754)
269 3kvw_A DYRK2, dual specificity 67.1 1.5 5E-05 48.6 0.9 30 851-880 391-420 (429)
270 4h7y_A Dual specificity protei 66.3 30 0.001 31.5 9.0 109 81-194 11-129 (161)
271 4fie_A Serine/threonine-protei 66.2 1.8 6.2E-05 47.5 1.4 26 851-876 383-408 (423)
272 3gni_B Strad alpha; kinase fol 65.9 1.5 5.1E-05 47.6 0.6 29 851-879 316-344 (389)
273 3qyz_A Mitogen-activated prote 64.8 1.7 6E-05 46.6 0.9 29 851-879 296-324 (364)
274 2b9h_A MAP kinase FUS3, mitoge 64.6 2.1 7.3E-05 45.5 1.6 30 851-880 288-317 (353)
275 4gns_B Protein CSD3, chitin bi 64.4 32 0.0011 40.5 11.5 127 87-221 252-398 (754)
276 1q8y_A SR protein kinase; tran 64.4 2.8 9.7E-05 44.9 2.5 30 851-880 316-345 (373)
277 2pml_X PFPK7, Ser/Thr protein 64.0 1 3.6E-05 47.9 -1.1 29 851-879 305-333 (348)
278 3u64_A Protein TP_0956; tetrat 64.0 34 0.0012 35.0 10.1 112 81-200 152-283 (301)
279 3rgf_A Cyclin-dependent kinase 63.7 2.2 7.7E-05 46.5 1.5 27 851-877 316-342 (405)
280 3eb0_A Putative uncharacterize 63.5 1.1 3.9E-05 48.5 -0.9 29 851-879 304-332 (383)
281 1j1b_A Glycogen synthase kinas 63.0 2 6.8E-05 47.3 0.9 29 851-879 319-347 (420)
282 1nzn_A CGI-135 protein, fissio 62.7 33 0.0011 30.2 8.5 57 131-188 42-103 (126)
283 3qd2_B Eukaryotic translation 62.6 1.8 6.2E-05 45.5 0.5 25 851-875 308-332 (332)
284 1wdy_A 2-5A-dependent ribonucl 62.4 1.2E+02 0.0042 29.8 15.5 41 660-700 200-243 (285)
285 3lm5_A Serine/threonine-protei 62.3 2.4 8.1E-05 44.7 1.4 29 851-879 270-298 (327)
286 1ob3_A PFPK5, cell division co 62.0 1.9 6.5E-05 44.5 0.5 24 851-874 263-286 (288)
287 2i6l_A Mitogen-activated prote 62.0 2 7E-05 44.8 0.8 29 851-879 288-316 (320)
288 4b4t_P 26S proteasome regulato 61.7 1.9E+02 0.0063 31.6 21.0 153 138-290 30-203 (445)
289 1ua2_A CAK, cell division prot 61.5 2.2 7.4E-05 45.5 0.9 30 851-880 274-303 (346)
290 3mi9_A Cell division protein k 61.2 2.6 8.9E-05 44.9 1.4 30 851-880 294-323 (351)
291 3ttj_A Mitogen-activated prote 61.1 2.3 7.7E-05 47.6 1.0 27 851-877 338-364 (464)
292 3lvg_A Clathrin heavy chain 1; 60.9 0.24 8.1E-06 54.2 -6.7 142 45-212 56-217 (624)
293 2ac3_A MAP kinase-interacting 60.2 2.3 7.7E-05 44.5 0.7 27 851-877 278-304 (316)
294 3v5w_A G-protein coupled recep 59.5 8.1 0.00028 44.9 5.2 26 851-876 427-457 (689)
295 4h7y_A Dual specificity protei 59.4 33 0.0011 31.2 8.0 51 243-294 74-124 (161)
296 2p58_C Putative type III secre 59.4 56 0.0019 27.3 8.6 88 97-199 21-108 (116)
297 2ff4_A Probable regulatory pro 59.3 26 0.00089 37.7 9.1 55 235-290 177-231 (388)
298 1nzn_A CGI-135 protein, fissio 59.1 46 0.0016 29.2 8.8 81 140-222 17-102 (126)
299 1blx_A Cyclin-dependent kinase 59.1 2.8 9.7E-05 43.9 1.3 30 851-880 279-308 (326)
300 2vwi_A Serine/threonine-protei 58.6 2.7 9.1E-05 43.5 0.9 29 851-879 270-298 (303)
301 3hko_A Calcium/calmodulin-depe 58.5 1.7 5.9E-05 46.1 -0.6 29 851-879 313-341 (345)
302 2w4o_A Calcium/calmodulin-depe 58.5 4.3 0.00015 43.2 2.6 29 851-879 288-316 (349)
303 2uwj_G Type III export protein 58.0 53 0.0018 27.4 8.2 88 97-199 20-107 (115)
304 1t4h_A Serine/threonine-protei 57.6 2.6 8.9E-05 43.4 0.6 24 851-874 265-288 (290)
305 2j7t_A Serine/threonine-protei 57.4 3.3 0.00011 42.8 1.4 29 851-879 258-286 (302)
306 3uto_A Twitchin; kinase, muscl 56.6 4.8 0.00016 46.2 2.7 28 851-878 393-420 (573)
307 2a2a_A Death-associated protei 56.6 4.4 0.00015 42.4 2.2 27 851-877 255-281 (321)
308 3g33_A Cell division protein k 56.6 2.9 9.8E-05 43.5 0.8 25 851-875 279-303 (308)
309 2xrw_A Mitogen-activated prote 55.4 1.9 6.5E-05 46.5 -0.9 28 851-878 301-328 (371)
310 1phk_A Phosphorylase kinase; g 54.8 3.4 0.00011 42.6 0.9 27 851-877 266-292 (298)
311 2y69_E Cytochrome C oxidase su 54.6 36 0.0012 30.2 7.1 63 139-202 68-130 (152)
312 3a99_A Proto-oncogene serine/t 54.2 2.2 7.5E-05 44.8 -0.7 29 851-879 276-304 (320)
313 3llt_A Serine/threonine kinase 53.9 3.2 0.00011 44.3 0.6 23 851-873 338-360 (360)
314 1x8b_A WEE1HU, WEE1-like prote 53.8 3.5 0.00012 42.0 0.9 25 851-875 262-286 (289)
315 2yab_A Death-associated protei 53.3 3.9 0.00013 43.9 1.1 26 851-876 255-280 (361)
316 2x7f_A TRAF2 and NCK-interacti 53.1 0.88 3E-05 48.0 -4.0 30 851-880 269-298 (326)
317 2yex_A Serine/threonine-protei 53.1 4.1 0.00014 41.3 1.3 28 851-878 244-271 (276)
318 4ejn_A RAC-alpha serine/threon 52.6 3.7 0.00013 45.4 0.9 27 851-877 382-413 (446)
319 4g8k_A 2-5A-dependent ribonucl 52.4 1.5E+02 0.005 30.5 13.6 265 131-433 29-320 (337)
320 1v54_E Cytochrome C oxidase po 52.2 46 0.0016 27.9 7.0 64 98-168 25-88 (109)
321 3utm_A Tankyrase-1; tankyrase, 52.1 1.4E+02 0.0049 30.5 13.5 84 352-435 27-112 (351)
322 3txn_A 26S proteasome regulato 51.9 2.1E+02 0.0071 30.6 14.5 89 475-564 105-199 (394)
323 3tki_A Serine/threonine-protei 51.7 5.1 0.00017 42.1 1.7 26 851-876 244-269 (323)
324 2iwi_A Serine/threonine-protei 51.0 4 0.00014 42.4 0.8 30 851-880 266-295 (312)
325 2eue_A Carbon catabolite derep 50.7 2.6 8.9E-05 43.0 -0.8 24 851-874 245-268 (275)
326 3cok_A Serine/threonine-protei 50.6 4.4 0.00015 41.2 1.0 26 851-876 245-270 (278)
327 3q60_A ROP5B; pseudokinase, tr 50.3 1.8 6.1E-05 46.7 -2.2 27 851-877 335-361 (371)
328 3txo_A PKC-L, NPKC-ETA, protei 50.2 3.3 0.00011 44.3 -0.1 26 851-876 257-288 (353)
329 2wtk_C Serine/threonine-protei 50.1 3.4 0.00012 42.8 -0.0 30 851-880 246-275 (305)
330 3bhy_A Death-associated protei 50.1 2.5 8.5E-05 43.3 -1.1 29 851-879 248-276 (283)
331 2y0a_A Death-associated protei 50.0 4.5 0.00015 42.5 1.0 26 851-876 254-279 (326)
332 1kob_A Twitchin; kinase, intra 49.9 6.7 0.00023 42.5 2.4 26 851-876 287-312 (387)
333 2x4f_A Myosin light chain kina 49.9 3 0.0001 45.0 -0.4 27 851-877 325-351 (373)
334 3is5_A Calcium-dependent prote 49.5 4.1 0.00014 41.8 0.5 24 851-874 261-284 (285)
335 4dc2_A Protein kinase C IOTA t 49.3 4.2 0.00015 44.2 0.6 26 851-876 295-326 (396)
336 3fxz_A Serine/threonine-protei 49.3 3.3 0.00011 42.9 -0.2 28 851-878 252-279 (297)
337 3p23_A Serine/threonine-protei 49.1 4.5 0.00015 44.6 0.8 26 851-876 266-291 (432)
338 3h4j_B AMPK kdaid, SNF1-like p 48.9 4.1 0.00014 43.2 0.4 24 851-874 241-264 (336)
339 3pfq_A PKC-B, PKC-beta, protei 48.8 13 0.00044 43.6 4.7 26 851-876 575-605 (674)
340 4b9d_A Serine/threonine-protei 48.5 3.1 0.00011 44.3 -0.6 24 851-874 259-282 (350)
341 3a8x_A Protein kinase C IOTA t 48.3 4.3 0.00015 43.2 0.5 26 851-876 252-283 (345)
342 3i6u_A CDS1, serine/threonine- 48.1 4.3 0.00015 44.6 0.4 24 851-874 382-405 (419)
343 1tki_A Titin; serine kinase, m 47.7 4.7 0.00016 42.3 0.6 27 851-877 240-266 (321)
344 2dyl_A Dual specificity mitoge 47.6 1.7 5.9E-05 45.4 -2.8 30 851-880 266-295 (318)
345 1qsa_A Protein (soluble lytic 47.1 3.7E+02 0.013 30.6 21.4 325 90-495 13-345 (618)
346 4aaa_A Cyclin-dependent kinase 46.6 3 0.0001 44.0 -1.2 25 851-875 289-313 (331)
347 3p1a_A MYT1 kinase, membrane-a 46.4 5 0.00017 41.8 0.6 24 851-874 287-310 (311)
348 3f3z_A Calcium/calmodulin-depe 46.4 2.4 8.1E-05 43.3 -1.9 27 851-877 244-270 (277)
349 2ycf_A Serine/threonine-protei 46.3 5 0.00017 42.0 0.6 25 851-875 257-281 (322)
350 1zy4_A Serine/threonine-protei 45.8 6.1 0.00021 40.5 1.2 25 851-875 266-290 (303)
351 2y7j_A Phosphorylase B kinase 45.7 4.7 0.00016 43.2 0.3 23 851-873 342-364 (365)
352 2zv2_A Calcium/calmodulin-depe 45.6 3.4 0.00012 42.7 -0.8 23 851-873 275-297 (298)
353 3kk8_A Calcium/calmodulin depe 45.5 3.7 0.00013 41.9 -0.5 29 851-879 244-272 (284)
354 3com_A Serine/threonine-protei 45.1 3.4 0.00012 43.0 -1.0 31 851-881 261-291 (314)
355 1k1a_A B-cell lymphoma 3-encod 45.0 43 0.0015 32.4 7.5 63 475-542 12-74 (241)
356 2jam_A Calcium/calmodulin-depe 44.3 3.1 0.00011 43.2 -1.5 27 851-877 244-270 (304)
357 3a62_A Ribosomal protein S6 ki 44.2 6.1 0.00021 41.5 0.9 26 851-876 254-284 (327)
358 4fhn_B Nucleoporin NUP120; pro 43.8 3E+02 0.01 34.1 16.4 53 382-439 816-870 (1139)
359 2wei_A Calmodulin-domain prote 43.6 3.1 0.00011 42.7 -1.5 27 851-877 259-285 (287)
360 3fme_A Dual specificity mitoge 43.3 4.2 0.00014 41.7 -0.6 26 851-876 249-274 (290)
361 2wpv_A GET4, UPF0363 protein Y 42.8 3E+02 0.01 28.3 16.9 85 134-218 63-158 (312)
362 2vgo_A Serine/threonine-protei 42.8 3.9 0.00013 41.9 -1.0 26 851-876 245-270 (284)
363 3kea_A K1L; tropism, ANK repea 42.5 1.5E+02 0.0052 29.6 11.4 65 624-697 208-272 (285)
364 3fdn_A Serine/threonine-protei 42.2 3.8 0.00013 41.8 -1.1 29 851-879 240-268 (279)
365 1o6l_A RAC-beta serine/threoni 41.8 7 0.00024 41.3 0.9 26 851-876 238-268 (337)
366 3byv_A Rhoptry kinase; malaria 41.3 2.8 9.7E-05 45.2 -2.4 27 851-877 342-368 (377)
367 3uc3_A Serine/threonine-protei 40.6 4.7 0.00016 43.1 -0.7 24 851-874 257-280 (361)
368 3dls_A PAS domain-containing s 40.4 7.7 0.00026 40.9 0.9 25 851-875 257-281 (335)
369 1k1a_A B-cell lymphoma 3-encod 39.8 2.1E+02 0.0073 27.1 11.7 49 385-434 13-66 (241)
370 3ffl_A Anaphase-promoting comp 39.7 79 0.0027 29.2 7.5 28 473-500 126-153 (167)
371 1zbp_A Hypothetical protein VP 39.6 1.9E+02 0.0065 29.0 10.8 70 131-203 4-77 (273)
372 3eqc_A Dual specificity mitoge 39.6 4.2 0.00015 43.3 -1.3 30 851-880 307-336 (360)
373 3lpz_A GET4 (YOR164C homolog); 39.5 3.5E+02 0.012 28.1 19.1 194 174-440 11-216 (336)
374 3m2w_A MAP kinase-activated pr 39.4 4.8 0.00016 41.6 -0.9 28 851-878 239-266 (299)
375 4b4t_R RPN7, 26S proteasome re 39.0 1.1E+02 0.0037 33.3 10.0 62 160-221 132-195 (429)
376 3fhr_A MAP kinase-activated pr 38.9 5 0.00017 42.4 -0.9 26 851-876 270-295 (336)
377 2clq_A Mitogen-activated prote 38.6 9.2 0.00031 39.1 1.2 26 851-876 261-286 (295)
378 4g3f_A NF-kappa-beta-inducing 38.4 10 0.00035 40.0 1.5 28 851-878 292-332 (336)
379 1vzo_A Ribosomal protein S6 ki 38.3 9 0.00031 40.8 1.0 26 851-876 299-329 (355)
380 1xjd_A Protein kinase C, theta 37.8 6.5 0.00022 41.8 -0.2 26 851-876 251-277 (345)
381 2y69_E Cytochrome C oxidase su 37.7 92 0.0031 27.7 7.0 63 99-168 69-131 (152)
382 4b4t_R RPN7, 26S proteasome re 37.6 2.5E+02 0.0084 30.4 12.7 55 131-185 138-194 (429)
383 3kn6_A Ribosomal protein S6 ki 37.2 4.9 0.00017 42.3 -1.3 27 851-877 253-279 (325)
384 1fot_A TPK1 delta, CAMP-depend 37.1 8.6 0.00029 40.2 0.6 26 851-876 236-266 (318)
385 3mwu_A Calmodulin-domain prote 36.6 5.6 0.00019 44.6 -1.0 30 851-880 259-288 (486)
386 3soa_A Calcium/calmodulin-depe 36.5 8.7 0.0003 42.4 0.6 25 851-875 250-274 (444)
387 3zgw_A Maternal embryonic leuc 36.5 5.9 0.0002 42.1 -0.8 25 851-875 243-267 (347)
388 2zu6_B Programmed cell death p 35.7 1.7E+02 0.0058 30.1 10.2 55 781-835 217-280 (307)
389 3dbq_A Dual specificity protei 35.5 6.4 0.00022 41.7 -0.7 25 851-875 256-280 (343)
390 3c0i_A Peripheral plasma membr 35.5 6.1 0.00021 42.0 -0.9 25 851-875 269-293 (351)
391 2h6d_A 5'-AMP-activated protei 35.3 6 0.00021 40.1 -0.9 24 851-874 244-267 (276)
392 3ffl_A Anaphase-promoting comp 35.3 2E+02 0.0067 26.6 9.3 97 265-385 64-161 (167)
393 2i0e_A Protein kinase C-beta I 34.8 9 0.00031 40.8 0.3 26 851-876 254-284 (353)
394 2qr7_A Ribosomal protein S6 ki 34.7 6.6 0.00023 41.6 -0.8 25 851-875 260-284 (342)
395 2c30_A Serine/threonine-protei 34.3 10 0.00034 39.7 0.6 26 851-876 277-302 (321)
396 2rku_A Serine/threonine-protei 33.9 12 0.00041 38.3 1.1 29 851-879 248-276 (294)
397 1nxk_A MAP kinase-activated pr 32.6 11 0.00036 41.0 0.4 25 851-875 304-328 (400)
398 4fr4_A YANK1, serine/threonine 32.6 12 0.00041 40.4 0.9 26 851-876 253-279 (384)
399 2rio_A Serine/threonine-protei 32.5 12 0.0004 41.2 0.8 24 851-874 278-301 (434)
400 3nyv_A Calmodulin-domain prote 32.3 8.1 0.00028 43.2 -0.6 27 851-877 264-290 (484)
401 1rdq_E PKA C-alpha, CAMP-depen 32.3 11 0.00039 39.9 0.6 26 851-876 271-301 (350)
402 3an0_A Dual specificity mitoge 32.2 8 0.00027 40.7 -0.6 29 851-879 293-321 (340)
403 2wpv_A GET4, UPF0363 protein Y 32.0 4.3E+02 0.015 27.0 18.5 82 345-440 133-217 (312)
404 2bdw_A Hypothetical protein K1 30.8 8.4 0.00029 41.2 -0.7 25 851-875 267-291 (362)
405 3lij_A Calcium/calmodulin depe 30.7 8.5 0.00029 43.1 -0.8 25 851-875 274-298 (494)
406 3utm_A Tankyrase-1; tankyrase, 30.4 4.3E+02 0.015 26.6 14.5 125 383-542 26-152 (351)
407 3aji_A 26S proteasome non-ATPa 30.4 2.5E+02 0.0087 26.4 10.4 84 352-435 9-94 (231)
408 3aln_A Dual specificity mitoge 30.3 4.8 0.00016 42.2 -2.8 29 851-879 268-296 (327)
409 3q5i_A Protein kinase; CDPK, m 29.7 8.4 0.00029 43.3 -1.0 29 851-879 284-312 (504)
410 1u5q_A Serine/threonine protei 29.6 11 0.00036 40.1 -0.2 29 851-879 288-316 (348)
411 2acx_A G protein-coupled recep 29.4 15 0.00051 42.0 1.0 26 851-876 422-452 (576)
412 2zmd_A Dual specificity protei 29.0 9.5 0.00032 41.2 -0.7 26 851-876 303-328 (390)
413 2owb_A Serine/threonine-protei 28.5 9.1 0.00031 40.3 -1.0 27 851-877 274-300 (335)
414 3dzo_A Rhoptry kinase domain; 28.4 6.2 0.00021 43.1 -2.4 29 851-879 346-374 (413)
415 3cek_A Dual specificity protei 28.4 9.8 0.00034 39.4 -0.7 27 851-877 275-301 (313)
416 3eiq_C Programmed cell death p 28.3 1.5E+02 0.005 31.3 8.3 57 266-322 56-112 (358)
417 3b7b_A Euchromatic histone-lys 27.4 1.9E+02 0.0066 27.5 8.9 25 510-535 211-235 (237)
418 3jxi_A Vanilloid receptor-rela 27.0 30 0.001 34.3 2.7 119 89-218 8-161 (260)
419 2nsz_A Programmed cell death p 26.1 1.8E+02 0.0061 25.5 7.3 67 129-196 12-80 (129)
420 3eiq_C Programmed cell death p 26.1 5.4E+02 0.019 26.9 12.3 28 266-293 219-246 (358)
421 3ljn_A Hypothetical protein; a 25.4 2.9E+02 0.01 28.5 10.5 39 660-698 225-266 (364)
422 3a7i_A MST3 kinase, serine/thr 25.3 12 0.00042 38.4 -0.6 27 851-877 253-279 (303)
423 3hra_A Ankyrin repeat family p 25.2 3E+02 0.01 25.1 9.7 164 353-543 9-174 (201)
424 2p58_C Putative type III secre 25.1 83 0.0028 26.3 4.3 61 90-163 47-107 (116)
425 1zbp_A Hypothetical protein VP 23.9 1.6E+02 0.0054 29.6 7.1 71 91-168 5-77 (273)
426 3aji_A 26S proteasome non-ATPa 23.6 4.5E+02 0.016 24.5 11.9 20 270-289 9-28 (231)
427 4g8k_A 2-5A-dependent ribonucl 23.0 5.9E+02 0.02 25.6 14.6 21 268-288 26-46 (337)
428 1bd8_A P19INK4D CDK4/6 inhibit 23.0 2.5E+02 0.0087 24.4 8.2 83 352-435 5-89 (156)
429 3o48_A Mitochondria fission 1 22.9 3.5E+02 0.012 23.8 8.3 83 157-257 38-123 (134)
430 2r5t_A Serine/threonine-protei 22.8 23 0.00077 38.0 0.8 26 851-876 272-301 (373)
431 2vd5_A DMPK protein; serine/th 22.4 38 0.0013 36.8 2.5 25 851-876 308-335 (412)
432 2etb_A Transient receptor pote 22.3 76 0.0026 31.1 4.7 119 88-218 4-157 (256)
433 1ug3_A EIF4GI, eukaryotic prot 22.2 3.3E+02 0.011 28.3 9.8 150 509-701 14-169 (339)
434 4fke_A Aminopeptidase N; zinc 21.8 1.1E+03 0.037 28.2 16.9 89 131-224 693-788 (909)
435 3c4z_A Rhodopsin kinase; Ser/T 21.4 23 0.00078 40.2 0.5 26 851-876 426-456 (543)
436 3esl_A Checkpoint serine/threo 21.4 3.2E+02 0.011 26.0 8.4 57 137-193 92-149 (202)
437 3lpz_A GET4 (YOR164C homolog); 20.8 7.1E+02 0.024 25.7 20.6 113 84-217 36-159 (336)
438 2y94_A 5'-AMP-activated protei 20.5 17 0.00059 40.4 -0.8 24 851-874 249-272 (476)
439 2uwj_G Type III export protein 20.3 78 0.0027 26.4 3.3 59 91-162 47-105 (115)
No 1
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.2e-29 Score=301.89 Aligned_cols=451 Identities=11% Similarity=-0.035 Sum_probs=344.9
Q ss_pred ccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHH
Q psy767 53 WCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132 (902)
Q Consensus 53 ~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~ 132 (902)
+.+.|.+..++..|..++. +++..|+.++..|.+.|++++|..+|++|.. ..|+..++..+ +.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~--~~p~~~~~~~l------~~ 125 (597)
T 2xpi_A 63 TSTDGSFLKERNAQNTDSL---------SREDYLRLWRHDALMQQQYKCAAFVGEKVLD--ITGNPNDAFWL------AQ 125 (597)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH--HHCCHHHHHHH------HH
T ss_pred ccccCccCCCCCccccchH---------HHHHHHHHHHHHHHHccCchHHHHHHHHHHh--hCCCchHHHHH------HH
Confidence 4556777777777777776 7899999999999999999999999999984 56788889888 99
Q ss_pred HHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHH-HC--------------CCCCCHHHH
Q psy767 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS-QA--------------GLEPSAQTY 197 (902)
Q Consensus 133 ~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~-~~--------------g~~pd~~ty 197 (902)
+|.+.|++++|..+|+.+... +++..+|+.++.+|.+.|++++|+++|+++. .. |..++..+|
T Consensus 126 ~~~~~g~~~~A~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (597)
T 2xpi_A 126 VYCCTGDYARAKCLLTKEDLY--NRSSACRYLAAFCLVKLYDWQGALNLLGETNPFRKDEKNANKLLMQDGGIKLEASMC 203 (597)
T ss_dssp HHHHTTCHHHHHHHHHHTCGG--GTCHHHHHHHHHHHHHTTCHHHHHHHHCSSCTTC----------CCCSSCCHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHhcc--ccchhHHHHHHHHHHHHhhHHHHHHHHhccCCccccccccccccccccccchhHHHH
Confidence 999999999999999988643 6788999999999999999999999999532 21 233458899
Q ss_pred HHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHH--------------------------------------HHHH
Q psy767 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT--------------------------------------NLLI 239 (902)
Q Consensus 198 ~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~ 239 (902)
+.++.+|.+.|++++|.++|+++...++... ..+..+ ...+
T Consensus 204 ~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~-~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 282 (597)
T 2xpi_A 204 YLRGQVYTNLSNFDRAKECYKEALMVDAKCY-EAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYMLKLNKT 282 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-HHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHHHTTSCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCchhh-HHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987543321 111111 2223
Q ss_pred HhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHH
Q psy767 240 LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319 (902)
Q Consensus 240 ~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~ 319 (902)
...|++++|.++|+++... +++..+|+.++.+|.+.|++++|+++|+++.
T Consensus 283 ~~~g~~~~A~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~---------------------------- 332 (597)
T 2xpi_A 283 SHEDELRRAEDYLSSINGL--EKSSDLLLCKADTLFVRSRFIDVLAITTKIL---------------------------- 332 (597)
T ss_dssp TTHHHHHHHHHHHHTSTTG--GGCHHHHHHHHHHHHHTTCHHHHHHHHHHHH----------------------------
T ss_pred cCcchHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHhcCHHHHHHHHHHHH----------------------------
Confidence 4578889999999888765 5889999999999999999999999998742
Q ss_pred HHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHcC-CCCC-cccHHHHHHHHHHcCChHHH
Q psy767 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG-SSLV-NGDYLDIIHALAVSGHGEYI 397 (902)
Q Consensus 320 ~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m~-~~~~-~~~~~~li~~~~~~g~~~~A 397 (902)
+.+ +.+..+|+.++.+|.+.|++++|..+|+++. ..+. ...|+.++..|.+.|++++|
T Consensus 333 -------------------~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 392 (597)
T 2xpi_A 333 -------------------EID-PYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEA 392 (597)
T ss_dssp -------------------HHC-TTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHH
T ss_pred -------------------HcC-cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHH
Confidence 222 2266788999999999999999999999863 2233 23488899999999999999
Q ss_pred HHHHHHcccCCCCCCCHH----HHHHHHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchH
Q psy767 398 DEIISKIQPGVGYSADAA----NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAA 473 (902)
Q Consensus 398 ~~l~~~m~~~~g~~pd~~----t~i~~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 473 (902)
.++|+++.+ ..|+.. .+...+.+.|++++|.++|+++.+... ... ....
T Consensus 393 ~~~~~~~~~---~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~---~~~---------------------~~~~ 445 (597)
T 2xpi_A 393 RRYFSKSST---MDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQ---GTH---------------------LPYL 445 (597)
T ss_dssp HHHHHHHHH---HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTT---TCS---------------------HHHH
T ss_pred HHHHHHHHH---hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc---cch---------------------HHHH
Confidence 999999987 445433 256778899999999999999886522 111 0234
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHHC----CCCCC--hhhHHH
Q psy767 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDE----NLHPR--AFNLAV 547 (902)
Q Consensus 474 ~li~~~~k~g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~----g~~Pd--~~t~~~ 547 (902)
.+...|.+.|++++|.++|+.+.... +.++.+|+.++..|.+.|+ +++|+++|++|.+. +..|+ ..+|..
T Consensus 446 ~l~~~~~~~g~~~~A~~~~~~~~~~~---~~~~~~~~~l~~~~~~~g~-~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~ 521 (597)
T 2xpi_A 446 FLGMQHMQLGNILLANEYLQSSYALF---QYDPLLLNELGVVAFNKSD-MQTAINHFQNALLLVKKTQSNEKPWAATWAN 521 (597)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHSCCCSGGGHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC---CCChHHHHHHHHHHHHhCC-HHHHHHHHHHHHHhhhccccchhhHHHHHHH
Confidence 47777999999999999999998763 2356789999999999999 99999999999876 78898 789999
Q ss_pred HHHHhcccccccCcchhhHhhhhhccCcchHHHHHHHHHHhhHHHhhhhhhhcccccccchhhhHHHH----HhhhHHHH
Q psy767 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVNSLYDLM----LSFLDAEV 623 (902)
Q Consensus 548 ll~a~~~~~~~~g~~~~~~~~~~~~~a~~~~~~ll~~m~~~g~~~~~~~~~~~~~~i~p~~~~~~~li----~~~~~~~a 623 (902)
+..++ + +.|+.++ |.. +|+++.+.+ +-+ +..+..+. ..|.+++|
T Consensus 522 l~~~~-~---~~g~~~~---------A~~----~~~~~~~~~-------------p~~--~~~~~~l~~~~~~~g~~~~A 569 (597)
T 2xpi_A 522 LGHAY-R---KLKMYDA---------AID----ALNQGLLLS-------------TND--ANVHTAIALVYLHKKIPGLA 569 (597)
T ss_dssp HHHHH-H---HTTCHHH---------HHH----HHHHHHHHS-------------SCC--HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHH-H---HhcCHHH---------HHH----HHHHHHHhC-------------CCC--hHHHHHHHHHHHHhCCHHHH
Confidence 99888 7 8999999 888 888887764 112 33443333 34449999
Q ss_pred HHHHHHHHHHhCCCCC
Q psy767 624 LRILQVAEAEFGVGSN 639 (902)
Q Consensus 624 l~ll~~m~~~~g~~P~ 639 (902)
++.++++ .+. .|+
T Consensus 570 ~~~~~~~-l~~--~p~ 582 (597)
T 2xpi_A 570 ITHLHES-LAI--SPN 582 (597)
T ss_dssp HHHHHHH-HHH--CTT
T ss_pred HHHHHHH-Hhc--CCC
Confidence 9999999 443 455
No 2
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.8e-29 Score=300.17 Aligned_cols=439 Identities=9% Similarity=-0.031 Sum_probs=357.6
Q ss_pred HHHHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHH
Q psy767 41 LLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVT 120 (902)
Q Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t 120 (902)
.+...++.++..|.+.|++++|..+|+.+.. ..|+..+|+.++.+|.+.|++++|..+|+.+.. ..++..+
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~-------~~p~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~--~~~~~~~ 152 (597)
T 2xpi_A 82 SREDYLRLWRHDALMQQQYKCAAFVGEKVLD-------ITGNPNDAFWLAQVYCCTGDYARAKCLLTKEDL--YNRSSAC 152 (597)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-------HHCCHHHHHHHHHHHHHTTCHHHHHHHHHHTCG--GGTCHHH
T ss_pred HHHHHHHHHHHHHHHccCchHHHHHHHHHHh-------hCCCchHHHHHHHHHHHcCcHHHHHHHHHHHhc--cccchhH
Confidence 4677888999999999999999999999975 457889999999999999999999999998864 3678999
Q ss_pred HHHHHHhHHHHHHHHHcCCHHHHHHHHHHh-hhC--------------CCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHH
Q psy767 121 YQQLISNSKLISKYCQDGNIEGATKILEFM-RDK--------------TFPISEGVFNALIYGHSQANDMASAEGILTMM 185 (902)
Q Consensus 121 ~~~ll~~~~li~~~~~~g~~~~A~~l~~~m-~~~--------------~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M 185 (902)
++.+ +.+|.+.|++++|.++|+++ +.. +.+++..+|+.++.+|.+.|++++|+++|++|
T Consensus 153 ~~~l------~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 226 (597)
T 2xpi_A 153 RYLA------AFCLVKLYDWQGALNLLGETNPFRKDEKNANKLLMQDGGIKLEASMCYLRGQVYTNLSNFDRAKECYKEA 226 (597)
T ss_dssp HHHH------HHHHHHTTCHHHHHHHHCSSCTTC----------CCCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHH------HHHHHHHhhHHHHHHHHhccCCccccccccccccccccccchhHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9999 99999999999999999943 333 34557899999999999999999999999999
Q ss_pred HHCCCCCCHHHHHH--------------------------------------HHHHHHHcCChhHHHHHHHhcccCCCcc
Q psy767 186 SQAGLEPSAQTYTK--------------------------------------LMCGYAKHGDMDSIKTKIPSLKPQSELF 227 (902)
Q Consensus 186 ~~~g~~pd~~ty~~--------------------------------------ll~a~~~~g~~~~a~~l~~~~~~~~~~~ 227 (902)
.+.+.. +...+.. ++..|.+.|++++|.++|+.+... ..
T Consensus 227 ~~~~p~-~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~--~~ 303 (597)
T 2xpi_A 227 LMVDAK-CYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYMLKLNKTSHEDELRRAEDYLSSINGL--EK 303 (597)
T ss_dssp HHHCTT-CHHHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHHHTTSCTTTTHHHHHHHHHHHHTSTTG--GG
T ss_pred HHhCch-hhHHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHHHHHHHHHcCcchHHHHHHHHHHhhcC--Cc
Confidence 886422 2333332 355667889999999999999876 46
Q ss_pred chhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHH
Q psy767 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307 (902)
Q Consensus 228 ~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~ 307 (902)
+...+..+...+...|++++|..+|+++...+ +.+..+|+.++.+|.+.|++++|.++|+++..
T Consensus 304 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~--------------- 367 (597)
T 2xpi_A 304 SSDLLLCKADTLFVRSRFIDVLAITTKILEID-PYNLDVYPLHLASLHESGEKNKLYLISNDLVD--------------- 367 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHH---------------
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcC-cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHh---------------
Confidence 77888899999999999999999999999876 45788999999999999999999999997421
Q ss_pred HcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHcC-CCCC-cccHHHHH
Q psy767 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG-SSLV-NGDYLDII 385 (902)
Q Consensus 308 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m~-~~~~-~~~~~~li 385 (902)
..+.+..+|+.++.+|.+.|++++|.++|+++. ..|. ...|+.++
T Consensus 368 ---------------------------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~ 414 (597)
T 2xpi_A 368 ---------------------------------RHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFA 414 (597)
T ss_dssp ---------------------------------HCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ---------------------------------hCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 123468899999999999999999999999853 2333 33599999
Q ss_pred HHHHHcCChHHHHHHHHHcccCCCCCCCHH-HHHHHHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCC
Q psy767 386 HALAVSGHGEYIDEIISKIQPGVGYSADAA-NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464 (902)
Q Consensus 386 ~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~-t~i~~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~ 464 (902)
.+|.+.|++++|.++|+++.+...-.+..+ .+...|.+.|++++|.++|+++.+.....+.
T Consensus 415 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~------------------ 476 (597)
T 2xpi_A 415 HSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPL------------------ 476 (597)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHH------------------
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH------------------
Confidence 999999999999999999987221122222 2567788999999999999999875322111
Q ss_pred CCccccchHHHHHHHHhcCChHHHHHHHHHHHHcc----CCCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCCC
Q psy767 465 GVGYSADAANHIYHLINKGQIDAAYRIVNTLARSA----NINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHP 540 (902)
Q Consensus 465 ~~g~~~~~~~li~~~~k~g~~~~A~~l~~~m~~~~----~~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~g~~P 540 (902)
...++...|.+.|++++|.++|+.+.... ..+.....+|+.+...|.+.|+ +++|+.+++++.+.+ ..
T Consensus 477 ------~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~-~~~A~~~~~~~~~~~-p~ 548 (597)
T 2xpi_A 477 ------LLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKM-YDAAIDALNQGLLLS-TN 548 (597)
T ss_dssp ------HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHS-SC
T ss_pred ------HHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHhC-CC
Confidence 23457777999999999999999987763 2221125689999999999999 999999999988764 33
Q ss_pred ChhhHHHHHHHhcccccccCcchhhHhhhhhccCcchHHHHHHHHHHhh
Q psy767 541 RAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAE 589 (902)
Q Consensus 541 d~~t~~~ll~a~~~~~~~~g~~~~~~~~~~~~~a~~~~~~ll~~m~~~g 589 (902)
+..+|..+..++ . ..|+.++ |.. +|+++.+..
T Consensus 549 ~~~~~~~l~~~~-~---~~g~~~~---------A~~----~~~~~l~~~ 580 (597)
T 2xpi_A 549 DANVHTAIALVY-L---HKKIPGL---------AIT----HLHESLAIS 580 (597)
T ss_dssp CHHHHHHHHHHH-H---HTTCHHH---------HHH----HHHHHHHHC
T ss_pred ChHHHHHHHHHH-H---HhCCHHH---------HHH----HHHHHHhcC
Confidence 788899998887 7 8899999 877 777776654
No 3
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=99.96 E-value=1.4e-27 Score=274.66 Aligned_cols=195 Identities=14% Similarity=0.187 Sum_probs=178.0
Q ss_pred CCCCCC-HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCC---------HHHHHHH
Q psy767 77 LDVPLD-ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN---------IEGATKI 146 (902)
Q Consensus 77 ~g~~pd-~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~---------~~~A~~l 146 (902)
.+..+. ...++.+|.+|++.|++++|+++|++|.+.|+.||.+||++| |.+|++.+. ++.|.++
T Consensus 19 k~~~~spe~~l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~L------i~~c~~~~~~~~~~~~~~l~~A~~l 92 (501)
T 4g26_A 19 KAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVL------LYVCSLAEAATESSPNPGLSRGFDI 92 (501)
T ss_dssp -----CHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHH------HHHHTTCCCCSSSSCCHHHHHHHHH
T ss_pred hcccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHH------HHHHHhCCchhhhhhcchHHHHHHH
Confidence 454443 346899999999999999999999999999999999999999 999998764 7899999
Q ss_pred HHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCc
Q psy767 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226 (902)
Q Consensus 147 ~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~ 226 (902)
|++|...|+.||..|||+||++|++.|++++|+++|++|.+.|+.||..||++||.+|++.|+++
T Consensus 93 f~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~--------------- 157 (501)
T 4g26_A 93 FKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDAD--------------- 157 (501)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHH---------------
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHH---------------
Confidence 99999999999999999999999999999999999999999999999999999999999999888
Q ss_pred cchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHH
Q psy767 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306 (902)
Q Consensus 227 ~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l 306 (902)
+|.++|++|.+.|+.||..||++||.+|++.|++++|.++|++
T Consensus 158 --------------------~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~----------------- 200 (501)
T 4g26_A 158 --------------------KAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQR----------------- 200 (501)
T ss_dssp --------------------HHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHH-----------------
T ss_pred --------------------HHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHH-----------------
Confidence 5666777888899999999999999999999999999999997
Q ss_pred HHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHc
Q psy767 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359 (902)
Q Consensus 307 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~ 359 (902)
|.+.|+.|+..||+.++..|+..
T Consensus 201 ------------------------------Mr~~g~~ps~~T~~~l~~~F~s~ 223 (501)
T 4g26_A 201 ------------------------------LRDLVRQVSKSTFDMIEEWFKSE 223 (501)
T ss_dssp ------------------------------HHHHTSSBCHHHHHHHHHHHHSH
T ss_pred ------------------------------HHHhCCCcCHHHHHHHHHHHhcC
Confidence 77888999999999999988764
No 4
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=99.95 E-value=4.4e-27 Score=270.52 Aligned_cols=188 Identities=14% Similarity=0.110 Sum_probs=176.7
Q ss_pred HHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCC---------chHHHHHHHHHHHCCC
Q psy767 44 LLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEH---------TFSPTDFLAKLESQGI 114 (902)
Q Consensus 44 ~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~---------~~~A~~l~~~M~~~g~ 114 (902)
.+++.++++||+.|++++|..+|++|.. .|++||+.+||+||.+|++.+. ++.|.++|++|...|+
T Consensus 27 ~~l~~~id~c~k~G~~~~A~~lf~~M~~-----~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~ 101 (501)
T 4g26_A 27 ALLKQKLDMCSKKGDVLEALRLYDEARR-----NGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKV 101 (501)
T ss_dssp HHHHHHHHHTTTSCCHHHHHHHHHHHHH-----HTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHH-----cCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCC
Confidence 3566789999999999999999999997 7999999999999999998765 5779999999999999
Q ss_pred CCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCH
Q psy767 115 EPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194 (902)
Q Consensus 115 ~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~ 194 (902)
.||..||+++ |.+|++.|++++|.++|++|.+.|+.||..+||+||.+|++.|++++|.++|++|.+.|+.||.
T Consensus 102 ~Pd~~tyn~l------I~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~ 175 (501)
T 4g26_A 102 VPNEATFTNG------ARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEE 175 (501)
T ss_dssp CCCHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCH
T ss_pred CCCHHHHHHH------HHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCH
Confidence 9999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q psy767 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274 (902)
Q Consensus 195 ~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~ 274 (902)
.||++||.+|++.|+++ +|.+++++|.+.|+.|+..||+.++..|
T Consensus 176 ~ty~~Li~~~~~~g~~d-----------------------------------~A~~ll~~Mr~~g~~ps~~T~~~l~~~F 220 (501)
T 4g26_A 176 PELAALLKVSMDTKNAD-----------------------------------KVYKTLQRLRDLVRQVSKSTFDMIEEWF 220 (501)
T ss_dssp HHHHHHHHHHHHTTCHH-----------------------------------HHHHHHHHHHHHTSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCHH-----------------------------------HHHHHHHHHHHhCCCcCHHHHHHHHHHH
Confidence 99999999999999988 5666777788888999999999999999
Q ss_pred HHc
Q psy767 275 AKH 277 (902)
Q Consensus 275 ~~~ 277 (902)
+..
T Consensus 221 ~s~ 223 (501)
T 4g26_A 221 KSE 223 (501)
T ss_dssp HSH
T ss_pred hcC
Confidence 864
No 5
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.86 E-value=7.2e-19 Score=196.81 Aligned_cols=367 Identities=13% Similarity=0.068 Sum_probs=290.3
Q ss_pred HHHHHHHCCCchHHHHHHHHHHHCCCCC-CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHH
Q psy767 89 LLRVYLDNEHTFSPTDFLAKLESQGIEP-NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167 (902)
Q Consensus 89 li~~~~~~g~~~~A~~l~~~M~~~g~~p-d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~ 167 (902)
+...+.+.|++++|.+.+..+.+. .| +...+..+ ...+...|++++|...++...... +.+..+|+.+..
T Consensus 5 ~a~~~~~~g~~~~A~~~~~~~~~~--~p~~~~~~~~l------~~~~~~~~~~~~a~~~~~~a~~~~-p~~~~~~~~lg~ 75 (388)
T 1w3b_A 5 LAHREYQAGDFEAAERHCMQLWRQ--EPDNTGVLLLL------SSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGN 75 (388)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHh--CCCCHHHHHHH------HHHHHHcCCHHHHHHHHHHHHhcC-CCchHHHHHHHH
Confidence 345677889999999999998865 34 44555556 778889999999999999887765 678899999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHH
Q psy767 168 GHSQANDMASAEGILTMMSQAGLEPS-AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246 (902)
Q Consensus 168 ~~~~~g~~~~A~~l~~~M~~~g~~pd-~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 246 (902)
+|.+.|++++|+..|+++.+. .|+ ..+|..+..++...|++++|.+.|+.+....+. ....+..+..++...|+++
T Consensus 76 ~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~ 152 (388)
T 1w3b_A 76 VYKERGQLQEAIEHYRHALRL--KPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPD-LYCVRSDLGNLLKALGRLE 152 (388)
T ss_dssp HHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTT-CTHHHHHHHHHHHTTSCHH
T ss_pred HHHHCCCHHHHHHHHHHHHHc--CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHH
Confidence 999999999999999999886 454 557999999999999999999999998775432 3345566777778899999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhh
Q psy767 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVN 326 (902)
Q Consensus 247 ~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~ 326 (902)
+|..+|+++.... +.+..+|+.+...|.+.|++++|...|+++...
T Consensus 153 ~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------------------------------- 198 (388)
T 1w3b_A 153 EAKACYLKAIETQ-PNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTL--------------------------------- 198 (388)
T ss_dssp HHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH---------------------------------
T ss_pred HHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc---------------------------------
Confidence 9999999998764 456889999999999999999999999974221
Q ss_pred hhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCcc-cHHHHHHHHHHcCChHHHHHHHHHc
Q psy767 327 ICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVNG-DYLDIIHALAVSGHGEYIDEIISKI 404 (902)
Q Consensus 327 ~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~~-~~~~li~~~~~~g~~~~A~~l~~~m 404 (902)
. +-+...|..+...|...|++++|...|++. ...|..+ .|..+...+...|++++|.+.|+++
T Consensus 199 --------------~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 263 (388)
T 1w3b_A 199 --------------D-PNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRA 263 (388)
T ss_dssp --------------C-TTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred --------------C-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 1 224667888889999999999999999873 3344433 3788999999999999999999999
Q ss_pred ccCCCCCCCHHH----HHHHHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHH
Q psy767 405 QPGVGYSADAAN----HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLI 480 (902)
Q Consensus 405 ~~~~g~~pd~~t----~i~~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~ 480 (902)
.+ ..|+... +...+.+.|++++|...|+++.+.. |..+. ...++...+.
T Consensus 264 l~---~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~---p~~~~---------------------~~~~l~~~~~ 316 (388)
T 1w3b_A 264 IE---LQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC---PTHAD---------------------SLNNLANIKR 316 (388)
T ss_dssp HH---TCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC---TTCHH---------------------HHHHHHHHHH
T ss_pred Hh---hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---cccHH---------------------HHHHHHHHHH
Confidence 88 4554332 4556779999999999999988752 22110 2344666789
Q ss_pred hcCChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCCCC-hhhHHHHH
Q psy767 481 NKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPR-AFNLAVLI 549 (902)
Q Consensus 481 k~g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~g~~Pd-~~t~~~ll 549 (902)
+.|++++|...++.+.... |....++..+...+.+.|+ +++|+..|+++.+ +.|+ ...|..+.
T Consensus 317 ~~g~~~~A~~~~~~al~~~---p~~~~~~~~l~~~~~~~g~-~~~A~~~~~~a~~--~~p~~~~a~~~lg 380 (388)
T 1w3b_A 317 EQGNIEEAVRLYRKALEVF---PEFAAAHSNLASVLQQQGK-LQEALMHYKEAIR--ISPTFADAYSNMG 380 (388)
T ss_dssp TTTCHHHHHHHHHHHTTSC---TTCHHHHHHHHHHHHTTTC-CHHHHHHHHHHHT--TCTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcC---CCcHHHHHHHHHHHHHcCC-HHHHHHHHHHHHh--hCCCCHHHHHhHH
Confidence 9999999999999998752 3356788999999999999 9999999999886 3564 33444443
No 6
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.85 E-value=5.2e-19 Score=197.99 Aligned_cols=371 Identities=13% Similarity=0.061 Sum_probs=281.2
Q ss_pred ccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHH
Q psy767 53 WCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132 (902)
Q Consensus 53 ~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~ 132 (902)
+.+.|++++|...+..+.. ..+.+...+..+...+...|++++|..+++...+.. +.+..+|..+ ..
T Consensus 9 ~~~~g~~~~A~~~~~~~~~------~~p~~~~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~-p~~~~~~~~l------g~ 75 (388)
T 1w3b_A 9 EYQAGDFEAAERHCMQLWR------QEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNL------GN 75 (388)
T ss_dssp HHHHTCHHHHHHHHHHHHH------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HH
T ss_pred HHHCCCHHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCchHHHHHH------HH
Confidence 3456777777777766655 123345667777777888999999999998877643 4467788888 88
Q ss_pred HHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHcCChh
Q psy767 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS-AQTYTKLMCGYAKHGDMD 211 (902)
Q Consensus 133 ~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd-~~ty~~ll~a~~~~g~~~ 211 (902)
.|.+.|++++|...|+.+.... |.+..+|..+..++.+.|++++|.+.|+++.+. .|+ ...+..+...|...|+++
T Consensus 76 ~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~g~~~ 152 (388)
T 1w3b_A 76 VYKERGQLQEAIEHYRHALRLK-PDFIDGYINLAAALVAAGDMEGAVQAYVSALQY--NPDLYCVRSDLGNLLKALGRLE 152 (388)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHH--CTTCTHHHHHHHHHHHTTSCHH
T ss_pred HHHHCCCHHHHHHHHHHHHHcC-cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHccCHH
Confidence 9999999999999999887754 445667889999999999999999999998876 354 446667777888889999
Q ss_pred HHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhc
Q psy767 212 SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291 (902)
Q Consensus 212 ~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~ 291 (902)
+|.+.|+.+....+ .....+..+..++...|++++|...|+++.+.+ +.+...|..+...+...|++++|+..|++..
T Consensus 153 ~A~~~~~~al~~~p-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 230 (388)
T 1w3b_A 153 EAKACYLKAIETQP-NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD-PNFLDAYINLGNVLKEARIFDRAVAAYLRAL 230 (388)
T ss_dssp HHHHHHHHHHHHCT-TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 99999988876432 234566777778888999999999999988764 4567788889999999999999999988631
Q ss_pred cCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCC-CHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy767 292 SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP-SAQTYTKLMCGYAKHGDMDSIRRLLA 370 (902)
Q Consensus 292 ~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p-~~~t~~~Li~~y~~~g~~~~A~~~~~ 370 (902)
. +.| +..++..+..+|.+.|++++|...|+
T Consensus 231 ~-------------------------------------------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 261 (388)
T 1w3b_A 231 S-------------------------------------------------LSPNHAVVHGNLACVYYEQGLIDLAIDTYR 261 (388)
T ss_dssp H-------------------------------------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred h-------------------------------------------------hCcCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 1 123 56788889999999999999999998
Q ss_pred Hc-CCCCCcc-cHHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHH----HHHHHHHcCCHHHHHHHHHHHHhccCCC
Q psy767 371 QN-GSSLVNG-DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAAN----HIYHLINKGQIDAAYRIVNTLARSANIN 444 (902)
Q Consensus 371 ~m-~~~~~~~-~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t----~i~~l~~~g~~~~A~~~~~~m~~~~~i~ 444 (902)
++ ...|..+ .|..+...+.+.|++++|.+.|+++.+ ..|+... +...+...|++++|...++++.+. .
T Consensus 262 ~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~---~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~---~ 335 (388)
T 1w3b_A 262 RAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALR---LCPTHADSLNNLANIKREQGNIEEAVRLYRKALEV---F 335 (388)
T ss_dssp HHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTS---C
T ss_pred HHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc---C
Confidence 84 3344433 388899999999999999999999987 4454432 455567889999999999988764 2
Q ss_pred CCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHhcCChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHcC
Q psy767 445 GEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTN 520 (902)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k~g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g 520 (902)
|... ...+++...|.+.|++++|...|+.+... .|.....|..+...+...|
T Consensus 336 p~~~---------------------~~~~~l~~~~~~~g~~~~A~~~~~~a~~~---~p~~~~a~~~lg~~~~~~~ 387 (388)
T 1w3b_A 336 PEFA---------------------AAHSNLASVLQQQGKLQEALMHYKEAIRI---SPTFADAYSNMGNTLKEMQ 387 (388)
T ss_dssp TTCH---------------------HHHHHHHHHHHTTTCCHHHHHHHHHHHTT---CTTCHHHHHHHHHHHHHTC
T ss_pred CCcH---------------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhh---CCCCHHHHHhHHHHHHHcc
Confidence 2211 02345777799999999999999999875 2334566776666665544
No 7
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.76 E-value=4.7e-16 Score=180.29 Aligned_cols=402 Identities=11% Similarity=0.023 Sum_probs=283.0
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHH
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~y 162 (902)
...|-.....+.+.|++++|...|+++.+.. |+..+|..+ ..+|.+.|++++|...|+.+.+.+ |.+..+|
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~l------a~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~ 76 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALELK--EDPVFYSNL------SACYVSVGDLKKVVEMSTKALELK-PDYSKVL 76 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC--CCHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHC-SCCHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcC--ccHHHHHhH------HHHHHHHhhHHHHHHHHHHHhccC-hHHHHHH
Confidence 4567778888999999999999999998764 788888888 999999999999999999988765 5677889
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHH------------------------
Q psy767 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIP------------------------ 218 (902)
Q Consensus 163 n~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~------------------------ 218 (902)
..+..+|.+.|++++|...|+.+...+. ++......++..+........+.+.+.
T Consensus 77 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (514)
T 2gw1_A 77 LRRASANEGLGKFADAMFDLSVLSLNGD-FNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDKQ 155 (514)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSSS-CCGGGTHHHHHHHHHHHHHHHHTTC--------------------------
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhhc
Confidence 9999999999999999999999988752 344444444444333222222221111
Q ss_pred --------------hcccCC------CccchhhHHHHHHHHHh---cCCHHHHHHHHHHHHH-----CCC--------CC
Q psy767 219 --------------SLKPQS------ELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQ-----AGL--------EP 262 (902)
Q Consensus 219 --------------~~~~~~------~~~~~~~~~~~~~~~~~---~g~~~~A~~l~~~m~~-----~g~--------~p 262 (902)
...... .+.+...+......+.. .|+++.|..+|+++.. ..- +.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (514)
T 2gw1_A 156 ENLPSVTSMASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEK 235 (514)
T ss_dssp -CCCCHHHHHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHH
T ss_pred cCCchhHHHHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChH
Confidence 111000 01112222222332333 7999999999999987 311 22
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCC
Q psy767 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342 (902)
Q Consensus 263 d~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~ 342 (902)
+..+|..+...|...|++++|...|+++. ...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~l-----------------------------------------------~~~- 267 (514)
T 2gw1_A 236 LAISLEHTGIFKFLKNDPLGAHEDIKKAI-----------------------------------------------ELF- 267 (514)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHHHHH-----------------------------------------------HHC-
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHH-----------------------------------------------hhC-
Confidence 35678888999999999999999998732 221
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCcc-cHHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHH---H-
Q psy767 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVNG-DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA---N- 416 (902)
Q Consensus 343 ~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~~-~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~---t- 416 (902)
|+..+|..+..+|...|++++|...|++. ...+..+ .|..+...+...|++++|.+.|++... ..|+.. .
T Consensus 268 -~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~---~~~~~~~~~~~ 343 (514)
T 2gw1_A 268 -PRVNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKE---LDPENIFPYIQ 343 (514)
T ss_dssp -CCHHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHH---TCSSCSHHHHH
T ss_pred -ccHHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH---hChhhHHHHHH
Confidence 23777888888999999999999999873 3333333 377888889999999999999999877 344322 2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHhcCChHHHHHHHHHHH
Q psy767 417 HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLA 496 (902)
Q Consensus 417 ~i~~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k~g~~~~A~~l~~~m~ 496 (902)
+...+...|++++|..+++.+.+.....+. ..+.+...|.+.|++++|...++.+.
T Consensus 344 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~------------------------~~~~la~~~~~~~~~~~A~~~~~~a~ 399 (514)
T 2gw1_A 344 LACLAYRENKFDDCETLFSEAKRKFPEAPE------------------------VPNFFAEILTDKNDFDKALKQYDLAI 399 (514)
T ss_dssp HHHHTTTTTCHHHHHHHHHHHHHHSTTCSH------------------------HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHcccCHH------------------------HHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 344456889999999999988775222111 23446666889999999999998887
Q ss_pred HccCCCCCc---cchHHHHHHHHHH---cCCCHHHHHHHHHHHHHCCCCCChhhHHHHHHHhcccccccCcchhhHhhhh
Q psy767 497 RSANINGEQ---LPVGGFLVRHMVK---TNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVN 570 (902)
Q Consensus 497 ~~~~~~~~~---~~~~n~li~~~~~---~g~~~~~A~~l~~~m~~~g~~Pd~~t~~~ll~a~~~~~~~~g~~~~~~~~~~ 570 (902)
......+.. ...+..+...+.. .|+ +++|+..+++..+.. ..+...+..+..++ . ..|+.++
T Consensus 400 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~A~~~~~~a~~~~-~~~~~~~~~la~~~-~---~~g~~~~------ 467 (514)
T 2gw1_A 400 ELENKLDGIYVGIAPLVGKATLLTRNPTVEN-FIEATNLLEKASKLD-PRSEQAKIGLAQMK-L---QQEDIDE------ 467 (514)
T ss_dssp HHHHTSSSCSSCSHHHHHHHHHHHTSCCTTH-HHHHHHHHHHHHHHC-TTCHHHHHHHHHHH-H---HTTCHHH------
T ss_pred HhhhccchHHHHHHHHHHHHHHHhhhhhcCC-HHHHHHHHHHHHHhC-cccHHHHHHHHHHH-H---HhcCHHH------
Confidence 654322111 2378888888888 888 999999999977653 22455666666665 5 7888888
Q ss_pred hccCcchHHHHHHHHHHhh
Q psy767 571 QFRATPWKGELLKRFIQAE 589 (902)
Q Consensus 571 ~~~a~~~~~~ll~~m~~~g 589 (902)
|.. .|+...+..
T Consensus 468 ---A~~----~~~~a~~~~ 479 (514)
T 2gw1_A 468 ---AIT----LFEESADLA 479 (514)
T ss_dssp ---HHH----HHHHHHHHC
T ss_pred ---HHH----HHHHHHHhc
Confidence 777 666666553
No 8
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.74 E-value=5.6e-16 Score=176.61 Aligned_cols=307 Identities=11% Similarity=0.032 Sum_probs=216.9
Q ss_pred HHHHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHH
Q psy767 41 LLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVT 120 (902)
Q Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t 120 (902)
.+...+..+...+.+.|++++|...|+.+.. ..+.+...|..+...|...|++++|...|+++.+.+. .+..+
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p-~~~~~ 96 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVD------GDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKM-DFTAA 96 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH------hCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCC-CcHHH
Confidence 4555666677777777888888888777765 1334677777788888888888888888887776542 24566
Q ss_pred HHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCH---HHHHHHHHH------------HHhCCCHHHHHHHHHHH
Q psy767 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISE---GVFNALIYG------------HSQANDMASAEGILTMM 185 (902)
Q Consensus 121 ~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~---~~yn~Li~~------------~~~~g~~~~A~~l~~~M 185 (902)
+..+ ..+|.+.|++++|...|+.+...+ +.+. ..|..++.. +.+.|++++|+.+|+++
T Consensus 97 ~~~l------~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 169 (450)
T 2y4t_A 97 RLQR------GHLLLKQGKLDEAEDDFKKVLKSN-PSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKI 169 (450)
T ss_dssp HHHH------HHHHHHTTCHHHHHHHHHHHHTSC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHH------HHHHHHcCCHHHHHHHHHHHHhcC-CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 6666 777788888888888888777654 3333 555555433 77778888888888877
Q ss_pred HHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHH
Q psy767 186 SQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265 (902)
Q Consensus 186 ~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ 265 (902)
.+.. ..+..++..+..+|...|++++|...|+.+..... .+...+..+..++...|++++|...|+++.... +.+..
T Consensus 170 ~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-p~~~~ 246 (450)
T 2y4t_A 170 LEVC-VWDAELRELRAECFIKEGEPRKAISDLKAASKLKN-DNTEAFYKISTLYYQLGDHELSLSEVRECLKLD-QDHKR 246 (450)
T ss_dssp HHHC-TTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHC-SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHH
T ss_pred HHhC-CCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CChHH
Confidence 7653 23566777777788888888888877777765322 234556666666777778888888777777542 33344
Q ss_pred HHHHH------------HHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccc
Q psy767 266 TYTKL------------MCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333 (902)
Q Consensus 266 ty~~L------------I~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 333 (902)
.+..+ ...|.+.|++++|...|+++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~----------------------------------------- 285 (450)
T 2y4t_A 247 CFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMK----------------------------------------- 285 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-----------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----------------------------------------
Confidence 44444 6777777777777777776321
Q ss_pred cchHHhcCCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCc-ccHHHHHHHHHHcCChHHHHHHHHHccc
Q psy767 334 GPMMSQAGLEPS-----AQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVN-GDYLDIIHALAVSGHGEYIDEIISKIQP 406 (902)
Q Consensus 334 ~~~m~~~g~~p~-----~~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~-~~~~~li~~~~~~g~~~~A~~l~~~m~~ 406 (902)
+.|+ ..+|..+..+|.+.|++++|...+++. ...|.. ..|..+..+|...|++++|.+.|+++.+
T Consensus 286 --------~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 357 (450)
T 2y4t_A 286 --------TEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQE 357 (450)
T ss_dssp --------HCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred --------cCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 1232 457888999999999999999999984 334433 3488999999999999999999999988
Q ss_pred CCCCCCCHHH
Q psy767 407 GVGYSADAAN 416 (902)
Q Consensus 407 ~~g~~pd~~t 416 (902)
+.|+...
T Consensus 358 ---~~p~~~~ 364 (450)
T 2y4t_A 358 ---HNENDQQ 364 (450)
T ss_dssp ---TSSSCHH
T ss_pred ---hCcchHH
Confidence 6776654
No 9
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.73 E-value=3e-15 Score=170.58 Aligned_cols=335 Identities=10% Similarity=0.028 Sum_probs=224.9
Q ss_pred CCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHH
Q psy767 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG 160 (902)
Q Consensus 81 pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~ 160 (902)
.+...|..+...|.+.|++++|..+|+++.+.. +.+..+|..+ ..+|...|++++|...|+.+.+.+ +.+..
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~l------~~~~~~~g~~~~A~~~~~~al~~~-p~~~~ 95 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGD-PDNYIAYYRR------ATVFLAMGKSKAALPDLTKVIQLK-MDFTA 95 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CccHHHHHHH------HHHHHHCCCHHHHHHHHHHHHhcC-CCcHH
Confidence 466778899999999999999999999988753 3367778888 889999999999999999988765 55678
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCH----HHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHH
Q psy767 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSA----QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236 (902)
Q Consensus 161 ~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~----~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 236 (902)
.|..+..+|.+.|++++|...|+++.+. .|+. .++..+...+...+.+. ..
T Consensus 96 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~-----------------------~a 150 (450)
T 2y4t_A 96 ARLQRGHLLLKQGKLDEAEDDFKKVLKS--NPSENEEKEAQSQLIKSDEMQRLRS-----------------------QA 150 (450)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHHH-----------------------HH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCCChhhHHHHHHHHHHHHHHHHHH-----------------------HH
Confidence 8999999999999999999999999876 4543 55666655543322222 23
Q ss_pred HHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHH
Q psy767 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316 (902)
Q Consensus 237 ~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~ 316 (902)
..+...|++++|...|+.+.... +.+..++..+...|.+.|++++|+++|+++...
T Consensus 151 ~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~----------------------- 206 (450)
T 2y4t_A 151 LNAFGSGDYTAAIAFLDKILEVC-VWDAELRELRAECFIKEGEPRKAISDLKAASKL----------------------- 206 (450)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHH-----------------------
T ss_pred HHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHh-----------------------
Confidence 33445677778888888777653 456778888888888888888888888863211
Q ss_pred HHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCccc-HHHHHHHHHHcCCh
Q psy767 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVNGD-YLDIIHALAVSGHG 394 (902)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~~~-~~~li~~~~~~g~~ 394 (902)
.+.+..+|..+..+|...|++++|...|+++ ...|..+. +..+ ..+.
T Consensus 207 -------------------------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~-~~~~----- 255 (450)
T 2y4t_A 207 -------------------------KNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHY-KQVK----- 255 (450)
T ss_dssp -------------------------HCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH-HHHH-----
T ss_pred -------------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHH-HHHH-----
Confidence 1234667777777777777777777777763 22222222 2222 0000
Q ss_pred HHHHHHHHHcccCCCCCCCHHHHHHHHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHH
Q psy767 395 EYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAAN 474 (902)
Q Consensus 395 ~~A~~l~~~m~~~~g~~pd~~t~i~~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 474 (902)
... ........+.+.|++++|..+|+.+.+.. |..+.. .. ....+
T Consensus 256 -~~~--------------~~~~~~~~~~~~g~~~~A~~~~~~~l~~~---p~~~~~---~~--------------~~~~~ 300 (450)
T 2y4t_A 256 -KLN--------------KLIESAEELIRDGRYTDATSKYESVMKTE---PSIAEY---TV--------------RSKER 300 (450)
T ss_dssp -HHH--------------HHHHHHHHHHHHTCHHHHHHHHHHHHHHC---CSSHHH---HH--------------HHHHH
T ss_pred -HHH--------------HHHHHHHHHHHcCCHHHHHHHHHHHHhcC---CcchHH---HH--------------HHHHH
Confidence 000 00001233445555555555555554421 111000 00 01234
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCCCChhh
Q psy767 475 HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFN 544 (902)
Q Consensus 475 li~~~~k~g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~g~~Pd~~t 544 (902)
+...+.+.|++++|...++.+.... +....+|..+...|...|+ +++|+..++++.+ +.|+...
T Consensus 301 l~~~~~~~g~~~~A~~~~~~a~~~~---p~~~~~~~~l~~~~~~~~~-~~~A~~~~~~al~--~~p~~~~ 364 (450)
T 2y4t_A 301 ICHCFSKDEKPVEAIRVCSEVLQME---PDNVNALKDRAEAYLIEEM-YDEAIQDYETAQE--HNENDQQ 364 (450)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHC---TTCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHT--TSSSCHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhC---cccHHHHHHHHHHHHHhcC-HHHHHHHHHHHHH--hCcchHH
Confidence 5666888999999999999887652 2345788899999999999 9999999999877 4566433
No 10
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.73 E-value=3.5e-16 Score=181.36 Aligned_cols=413 Identities=10% Similarity=0.011 Sum_probs=303.0
Q ss_pred HHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHH
Q psy767 43 VLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ 122 (902)
Q Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~ 122 (902)
+-.+......+.+.|++++|...|..+.. ..|+...|..+..+|.+.|++++|...|+++.+.. +.+..+|.
T Consensus 6 a~~~~~~g~~~~~~g~~~~A~~~~~~al~-------~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~ 77 (514)
T 2gw1_A 6 ALALKDKGNQFFRNKKYDDAIKYYNWALE-------LKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELK-PDYSKVLL 77 (514)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHH-------HCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-SCCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHh-------cCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccC-hHHHHHHH
Confidence 33455667778889999999999999998 33799999999999999999999999999998764 23567788
Q ss_pred HHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCC------------
Q psy767 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL------------ 190 (902)
Q Consensus 123 ~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~------------ 190 (902)
.+ ..+|.+.|++++|...|+.+...+ +++......++..+.+......+.+.+..+...+.
T Consensus 78 ~l------~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 150 (514)
T 2gw1_A 78 RR------ASANEGLGKFADAMFDLSVLSLNG-DFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKE 150 (514)
T ss_dssp HH------HHHHHHTTCHHHHHHHHHHHHHSS-SCCGGGTHHHHHHHHHHHHHHHHTTC---------------------
T ss_pred HH------HHHHHHHhhHHHHHHHHHHHHhcC-CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhH
Confidence 88 999999999999999999998876 55666666666655554444443333322211110
Q ss_pred -------C------------------------CC-HHHHHHHHHHHHH---cCChhHHHHHHHhccc-----C--CC---
Q psy767 191 -------E------------------------PS-AQTYTKLMCGYAK---HGDMDSIKTKIPSLKP-----Q--SE--- 225 (902)
Q Consensus 191 -------~------------------------pd-~~ty~~ll~a~~~---~g~~~~a~~l~~~~~~-----~--~~--- 225 (902)
. |+ ...+......+.. .|++++|...|+.+.. . ..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 230 (514)
T 2gw1_A 151 RKDKQENLPSVTSMASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDE 230 (514)
T ss_dssp ------CCCCHHHHHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCH
T ss_pred HHhhccCCchhHHHHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCcccc
Confidence 1 11 3334444444443 8999999999998876 3 11
Q ss_pred ---ccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHH
Q psy767 226 ---LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302 (902)
Q Consensus 226 ---~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl 302 (902)
......+..+...+...|+++.|..+|+.+.... |+..+|..+...|...|++++|...|++....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------- 299 (514)
T 2gw1_A 231 KLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELF--PRVNSYIYMALIMADRNDSTEYYNYFDKALKL--------- 299 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHTSSCCTTGGGHHHHHHTT---------
T ss_pred ccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--ccHHHHHHHHHHHHHCCCHHHHHHHHHHHhhc---------
Confidence 2234455666677778999999999999998875 44888999999999999999999999874321
Q ss_pred HHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCc-cc
Q psy767 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVN-GD 380 (902)
Q Consensus 303 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~-~~ 380 (902)
.+.+..+|..+...|...|++++|...|++. ...|.. ..
T Consensus 300 ---------------------------------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 340 (514)
T 2gw1_A 300 ---------------------------------------DSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFP 340 (514)
T ss_dssp ---------------------------------------CTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHH
T ss_pred ---------------------------------------CcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHH
Confidence 1224567888999999999999999999984 333333 33
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHH-HHHHHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhh
Q psy767 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAAN-HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMV 459 (902)
Q Consensus 381 ~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t-~i~~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~ 459 (902)
|..+...+...|++++|.+.++++.....-.+..+. +...+...|++++|...++.+.+...-.+....
T Consensus 341 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~---------- 410 (514)
T 2gw1_A 341 YIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYV---------- 410 (514)
T ss_dssp HHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSS----------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHH----------
Confidence 788889999999999999999998873222333332 455667999999999999998775322221100
Q ss_pred hcCCCCCccccchHHHHHHHHh---cCChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHHC
Q psy767 460 KTNQPGVGYSADAANHIYHLIN---KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDE 536 (902)
Q Consensus 460 ~~~~~~~g~~~~~~~li~~~~k---~g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~ 536 (902)
.....+.+...|.+ .|++++|...|+.+.... +....++..+...+.+.|+ +++|+..|++..+.
T Consensus 411 --------~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~~~~~~~la~~~~~~g~-~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 411 --------GIAPLVGKATLLTRNPTVENFIEATNLLEKASKLD---PRSEQAKIGLAQMKLQQED-IDEAITLFEESADL 478 (514)
T ss_dssp --------CSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHC---TTCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhC---cccHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHh
Confidence 00023446666888 999999999999988763 3356788899999999999 99999999998775
Q ss_pred CCCCChhh
Q psy767 537 NLHPRAFN 544 (902)
Q Consensus 537 g~~Pd~~t 544 (902)
.|+...
T Consensus 479 --~~~~~~ 484 (514)
T 2gw1_A 479 --ARTMEE 484 (514)
T ss_dssp --CSSHHH
T ss_pred --ccccHH
Confidence 455433
No 11
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.71 E-value=7e-18 Score=198.41 Aligned_cols=156 Identities=12% Similarity=0.095 Sum_probs=129.7
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHH---CCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCC
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLES---QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS 158 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~---~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~ 158 (902)
-..+||++|++|++.|++++|.++|++|.+ .|+.||.+|||+| |++||+.|++++|.++|++|.+.|+.||
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtL------I~Glck~G~~~eA~~Lf~eM~~~G~~PD 199 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAV------MLGWARQGAFKELVYVLFMVKDAGLTPD 199 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHH------HHHHHhCCCHHHHHHHHHHHHHcCCCCc
Confidence 346899999999999999999999988864 5899999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccC-CCccchhhHHHHH
Q psy767 159 EGVFNALIYGHSQANDM-ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ-SELFLCFSFQLTN 236 (902)
Q Consensus 159 ~~~yn~Li~~~~~~g~~-~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~-~~~~~~~~~~~~~ 236 (902)
.+|||+||+++|+.|+. ++|.++|++|.+.|+.||.+||++++.++.+.+-++.+.++...+... ...+...+...+.
T Consensus 200 vvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY~~ll~~~eR~~vL~~Vrkv~P~f~p~~~~~~~~~t~~LL~ 279 (1134)
T 3spa_A 200 LLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLLSEEDRATVLKAVHKVKPTFSLPPQLPPPVNTSKLLR 279 (1134)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHHHHHHSCCCHHHHHHHHHHHGGGCCCCCCCCCCCCCCCCCTTTH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCCChhhcccccChhhHHHHHHHHHHhCcccCCCCCCcccccchHHHH
Confidence 99999999999999984 789999999999999999999999999888765555444443333322 1112244555666
Q ss_pred HHHHhcC
Q psy767 237 LLILVSS 243 (902)
Q Consensus 237 ~~~~~~g 243 (902)
.++...+
T Consensus 280 dl~s~d~ 286 (1134)
T 3spa_A 280 DVYAKDG 286 (1134)
T ss_dssp HHHCCCS
T ss_pred HHHccCC
Confidence 6666533
No 12
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.67 E-value=5.9e-14 Score=163.69 Aligned_cols=435 Identities=11% Similarity=0.008 Sum_probs=249.1
Q ss_pred HHHHHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHH
Q psy767 40 VLLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRV 119 (902)
Q Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ 119 (902)
...+-.+..+...+.+.|++++|...|..+.. -.+.+...|..+...|.+.|++++|++.|+++.+.. +.+..
T Consensus 22 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~------~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-p~~~~ 94 (537)
T 3fp2_A 22 QAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIE------LDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIK-PDHSK 94 (537)
T ss_dssp HHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHH------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh------hCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CchHH
Confidence 33566677777788888888888888888877 123466777778888888888888888888877653 22556
Q ss_pred HHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC------CCCCC
Q psy767 120 TYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA------GLEPS 193 (902)
Q Consensus 120 t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~------g~~pd 193 (902)
++..+ ..++...|++++|...|+.+... |+ ..+..+..+...+....|...++++... ...|+
T Consensus 95 ~~~~l------a~~~~~~g~~~~A~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~ 163 (537)
T 3fp2_A 95 ALLRR------ASANESLGNFTDAMFDLSVLSLN---GD--FDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPS 163 (537)
T ss_dssp HHHHH------HHHHHHHTCHHHHHHHHHHHC----------------CHHHHHHHHHHHHHHHHHCC-------CCCCC
T ss_pred HHHHH------HHHHHHcCCHHHHHHHHHHHhcC---CC--CChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccch
Confidence 66666 77777888888888887533221 11 2222344555555667777777777442 12333
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHH--------HhcCCHHHHHHHHHHHHHCCCCCC--
Q psy767 194 AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI--------LVSSDMASAEGILTMMSQAGLEPS-- 263 (902)
Q Consensus 194 ~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~~A~~l~~~m~~~g~~pd-- 263 (902)
...... +....+.+.+...+......... .......+..++ ...|+++.|..+++.+.+.. |+
T Consensus 164 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~--p~~~ 236 (537)
T 3fp2_A 164 NTSLAS----FFGIFDSHLEVSSVNTSSNYDTA-YALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSAN--TVDD 236 (537)
T ss_dssp HHHHHH----HHHTSCHHHHHHTSCCCCSSCSS-HHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC----CCCH
T ss_pred HhHHHH----HHHhcChHHHHHHHhhccccccH-HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC--CCcc
Confidence 333222 22222222222211111111000 000111111111 01234555555555554432 22
Q ss_pred ------HHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchH
Q psy767 264 ------AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337 (902)
Q Consensus 264 ------~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m 337 (902)
..+|..+...+...|++++|...|++..... |+...+...-......+..+.+...+. ..
T Consensus 237 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~A~~~~~------------~~ 302 (537)
T 3fp2_A 237 PLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLH--PTPNSYIFLALTLADKENSQEFFKFFQ------------KA 302 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHTCCSSCCHHHHHHHH------------HH
T ss_pred hhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHhcCHHHHHHHHH------------HH
Confidence 1234444444555555555555555544322 112222221112222222222222211 01
Q ss_pred HhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCc-ccHHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHH
Q psy767 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVN-GDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA 415 (902)
Q Consensus 338 ~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~-~~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~ 415 (902)
... .+.+..+|..+...|...|++++|...|++. ...|.. ..|..+...+...|++++|.+.++++.+...-.+..+
T Consensus 303 ~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 381 (537)
T 3fp2_A 303 VDL-NPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVP 381 (537)
T ss_dssp HHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHH
T ss_pred hcc-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 111 1235788999999999999999999999983 333333 3488899999999999999999999987322222222
Q ss_pred H-HHHHHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHhc----------CC
Q psy767 416 N-HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINK----------GQ 484 (902)
Q Consensus 416 t-~i~~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k~----------g~ 484 (902)
. +...+...|++++|...|+...+...-.+..... ....+.....|.+. |+
T Consensus 382 ~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~------------------~~~~~~~a~~~~~~~~~~~~~~~~~~ 443 (537)
T 3fp2_A 382 TFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVG------------------IGPLIGKATILARQSSQDPTQLDEEK 443 (537)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSST------------------THHHHHHHHHHHHHHTC----CCHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHH------------------HHHHHHHHHHHHHHhhccchhhhHhH
Confidence 2 4455679999999999999987753222111000 00122333456777 99
Q ss_pred hHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHHC
Q psy767 485 IDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDE 536 (902)
Q Consensus 485 ~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~ 536 (902)
+++|...|+...... +....++..+...+.+.|+ .++|+..|++..+.
T Consensus 444 ~~~A~~~~~~a~~~~---p~~~~~~~~l~~~~~~~g~-~~~A~~~~~~al~~ 491 (537)
T 3fp2_A 444 FNAAIKLLTKACELD---PRSEQAKIGLAQLKLQMEK-IDEAIELFEDSAIL 491 (537)
T ss_dssp HHHHHHHHHHHHHHC---TTCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHh
Confidence 999999999998763 2345788999999999999 99999999998775
No 13
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.67 E-value=7.6e-17 Score=189.68 Aligned_cols=130 Identities=18% Similarity=0.239 Sum_probs=113.6
Q ss_pred CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhh---CCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC
Q psy767 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRD---KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS 193 (902)
Q Consensus 117 d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~---~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd 193 (902)
-..||+++ |++||++|++++|.++|++|.+ +|+.||++|||+||++||+.|++++|.++|++|.+.|+.||
T Consensus 126 ~~~TynaL------IdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PD 199 (1134)
T 3spa_A 126 QQQRLLAF------FKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPD 199 (1134)
T ss_dssp HHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHH------HHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCc
Confidence 34678888 9999999999999999988764 58999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q psy767 194 AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCG 273 (902)
Q Consensus 194 ~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a 273 (902)
.+||++||.++++.|+..+ .|.++|++|.+.|+.||.++|++++.+
T Consensus 200 vvTYntLI~glcK~G~~~e----------------------------------~A~~Ll~EM~~kG~~PD~vtY~~ll~~ 245 (1134)
T 3spa_A 200 LLSYAAALQCMGRQDQDAG----------------------------------TIERCLEQMSQEGLKLQALFTAVLLSE 245 (1134)
T ss_dssp HHHHHHHHHHHHHHTCCHH----------------------------------HHHHHHHHHHHHTCCSHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHhCCCcHH----------------------------------HHHHHHHHHHHcCCCCChhhcccccCh
Confidence 9999999999999987531 567788888999999999999999988
Q ss_pred HHHcCCHHHHHHH
Q psy767 274 YAKHGDMDSVRRL 286 (902)
Q Consensus 274 ~~~~g~~~~A~~l 286 (902)
+.+.+-++.+.++
T Consensus 246 ~eR~~vL~~Vrkv 258 (1134)
T 3spa_A 246 EDRATVLKAVHKV 258 (1134)
T ss_dssp HHHHHHHHHHGGG
T ss_pred hhHHHHHHHHHHh
Confidence 8776444444333
No 14
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.63 E-value=2.9e-14 Score=166.31 Aligned_cols=387 Identities=10% Similarity=-0.039 Sum_probs=275.7
Q ss_pred hHHhhcHHHHHHHhccccchhHHHHHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCC
Q psy767 19 TEVSEATAEVTTVLGALGAFLVLLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEH 98 (902)
Q Consensus 19 ~~~s~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~ 98 (902)
....+++.+|...+.......+.+...+..+...|.+.|++++|...|+..... -+.+...|..+...|...|+
T Consensus 35 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~g~ 108 (537)
T 3fp2_A 35 FFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEI------KPDHSKALLRRASANESLGN 108 (537)
T ss_dssp HHHTTCCC-CHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHHTC
T ss_pred HHHhccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCchHHHHHHHHHHHHHcCC
Confidence 334577778888877776666677888889999999999999999999999871 24467889999999999999
Q ss_pred chHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhC------CCCCCHHH-----------
Q psy767 99 TFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK------TFPISEGV----------- 161 (902)
Q Consensus 99 ~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~------~~~p~~~~----------- 161 (902)
+++|...|+.+ ...|+.. ... +..+...+....|..+++.+... ...|+...
T Consensus 109 ~~~A~~~~~~~---~~~~~~~--~~~------~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (537)
T 3fp2_A 109 FTDAMFDLSVL---SLNGDFD--GAS------IEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSH 177 (537)
T ss_dssp HHHHHHHHHHH---C-------------------CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHH---hcCCCCC--hHH------HHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChH
Confidence 99999999643 2233322 223 44555666677888888887543 11222221
Q ss_pred -------------------HHHHHHHHHhC--------CCHHHHHHHHHHHHHCCCCCC--------HHHHHHHHHHHHH
Q psy767 162 -------------------FNALIYGHSQA--------NDMASAEGILTMMSQAGLEPS--------AQTYTKLMCGYAK 206 (902)
Q Consensus 162 -------------------yn~Li~~~~~~--------g~~~~A~~l~~~M~~~g~~pd--------~~ty~~ll~a~~~ 206 (902)
+..+...+... |++++|..+|+++.+. .|+ ..+|..+...+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~--~p~~~~~~~~~~~~~~~~g~~~~~ 255 (537)
T 3fp2_A 178 LEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSA--NTVDDPLRENAALALCYTGIFHFL 255 (537)
T ss_dssp HHHHTSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH--CCCcchhhHHHHHHHHHHHHHHHh
Confidence 22222222221 4788999999998876 344 2356677778888
Q ss_pred cCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q psy767 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286 (902)
Q Consensus 207 ~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~l 286 (902)
.|++++|...++........ ...+..+..++...|+++.|...++.+.... +.+..+|..+...|...|++++|...
T Consensus 256 ~~~~~~A~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~ 332 (537)
T 3fp2_A 256 KNNLLDAQVLLQESINLHPT--PNSYIFLALTLADKENSQEFFKFFQKAVDLN-PEYPPTYYHRGQMYFILQDYKNAKED 332 (537)
T ss_dssp TTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cccHHHHHHHHHHHHhcCCC--chHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHhcCCHHHHHHH
Confidence 99999999999988876544 5566666777777899999999999988764 45688899999999999999999999
Q ss_pred HHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHH
Q psy767 287 LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366 (902)
Q Consensus 287 f~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~ 366 (902)
|++.... . +.+..+|..+...|...|++++|.
T Consensus 333 ~~~a~~~----------------------------------------------~--~~~~~~~~~la~~~~~~g~~~~A~ 364 (537)
T 3fp2_A 333 FQKAQSL----------------------------------------------N--PENVYPYIQLACLLYKQGKFTESE 364 (537)
T ss_dssp HHHHHHH----------------------------------------------C--TTCSHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHh----------------------------------------------C--CCCHHHHHHHHHHHHHcCCHHHHH
Confidence 9873221 1 123567888999999999999999
Q ss_pred HHHHHc-CCCCCcc-cHHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHH-------HHHHHHHHc----------CCH
Q psy767 367 RLLAQN-GSSLVNG-DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA-------NHIYHLINK----------GQI 427 (902)
Q Consensus 367 ~~~~~m-~~~~~~~-~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~-------t~i~~l~~~----------g~~ 427 (902)
..|++. ...|..+ .|..+...+...|++++|.+.|+++.+...-.++.. .....+... |++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 444 (537)
T 3fp2_A 365 AFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKF 444 (537)
T ss_dssp HHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHH
T ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHH
Confidence 999883 3333433 488899999999999999999999876211111111 112445566 999
Q ss_pred HHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHhcCChHHHHHHHHHHHHcc
Q psy767 428 DAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSA 499 (902)
Q Consensus 428 ~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k~g~~~~A~~l~~~m~~~~ 499 (902)
++|...|++..+.. |..+ ...+.+...|.+.|++++|...|+......
T Consensus 445 ~~A~~~~~~a~~~~---p~~~---------------------~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 492 (537)
T 3fp2_A 445 NAAIKLLTKACELD---PRSE---------------------QAKIGLAQLKLQMEKIDEAIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHC---TTCH---------------------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC---CCCH---------------------HHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 99999999998752 2211 023456677999999999999999998864
No 15
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.59 E-value=2.3e-12 Score=141.02 Aligned_cols=306 Identities=11% Similarity=0.005 Sum_probs=182.7
Q ss_pred HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHH
Q psy767 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197 (902)
Q Consensus 118 ~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty 197 (902)
...+..+ ...+.+.|++++|...|+.+.+.+ +.+...|..+...+...|++++|+..|+++.+.. +-+...|
T Consensus 3 ~~~~~~~------~~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~ 74 (359)
T 3ieg_A 3 VEKHLEL------GKKLLAAGQLADALSQFHAAVDGD-PDNYIAYYRRATVFLAMGKSKAALPDLTKVIALK-MDFTAAR 74 (359)
T ss_dssp HHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHH------HHHHHHcCCHHHHHHHHHHHHhhC-cccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCcchHH
Confidence 3445555 888899999999999999988765 5677899999999999999999999999998863 2266788
Q ss_pred HHHHHHHHHcCChhHHHHHHHhcccCCCc--cchhhHHHH------------HHHHHhcCCHHHHHHHHHHHHHCCCCCC
Q psy767 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSEL--FLCFSFQLT------------NLLILVSSDMASAEGILTMMSQAGLEPS 263 (902)
Q Consensus 198 ~~ll~a~~~~g~~~~a~~l~~~~~~~~~~--~~~~~~~~~------------~~~~~~~g~~~~A~~l~~~m~~~g~~pd 263 (902)
..+...+...|++++|...++........ .....+..+ ...+...|+++.|..+++.+.... +.+
T Consensus 75 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~ 153 (359)
T 3ieg_A 75 LQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVC-VWD 153 (359)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCc
Confidence 89999999999999999999988775441 111111111 233333455555555555444432 233
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCC
Q psy767 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343 (902)
Q Consensus 264 ~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~ 343 (902)
..+|..+...|...|++++|...|++.... .+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------------------------------------------------~~ 185 (359)
T 3ieg_A 154 AELRELRAECFIKEGEPRKAISDLKAASKL------------------------------------------------KS 185 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT------------------------------------------------CS
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHh------------------------------------------------CC
Confidence 444444444555555555555544432110 01
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHH-------
Q psy767 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAAN------- 416 (902)
Q Consensus 344 p~~~t~~~Li~~y~~~g~~~~A~~~~~~m~~~~~~~~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t------- 416 (902)
.+..++. .+...+...|++++|.+.|++..+ ..|+...
T Consensus 186 ~~~~~~~--------------------------------~la~~~~~~~~~~~A~~~~~~a~~---~~~~~~~~~~~~~~ 230 (359)
T 3ieg_A 186 DNTEAFY--------------------------------KISTLYYQLGDHELSLSEVRECLK---LDQDHKRCFAHYKQ 230 (359)
T ss_dssp CCHHHHH--------------------------------HHHHHHHHHTCHHHHHHHHHHHHH---HCTTCHHHHHHHHH
T ss_pred CCHHHHH--------------------------------HHHHHHHHcCCHHHHHHHHHHHHh---hCccchHHHHHHHH
Confidence 1233444 444444455555555555544444 2222211
Q ss_pred ---------HHHHHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHhcCChHH
Q psy767 417 ---------HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDA 487 (902)
Q Consensus 417 ---------~i~~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k~g~~~~ 487 (902)
....+.+.|++++|...+++..+...-.+. . ... ....+...+.+.|++++
T Consensus 231 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~---~---~~~--------------~~~~la~~~~~~~~~~~ 290 (359)
T 3ieg_A 231 VKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAE---Y---TVR--------------SKERICHCFSKDEKPVE 290 (359)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHH---H---HHH--------------HHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchH---H---HHH--------------HHHHHHHHHHHccCHHH
Confidence 022244556666666666655553221110 0 000 01224445677777777
Q ss_pred HHHHHHHHHHccCCCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCCCC
Q psy767 488 AYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPR 541 (902)
Q Consensus 488 A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~g~~Pd 541 (902)
|...++...... +..+.++..+...+...|+ +++|+..|++..+. .|+
T Consensus 291 A~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~-~~~A~~~~~~a~~~--~p~ 338 (359)
T 3ieg_A 291 AIRICSEVLQME---PDNVNALKDRAEAYLIEEM-YDEAIQDYEAAQEH--NEN 338 (359)
T ss_dssp HHHHHHHHHHHC---TTCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHTT--CTT
T ss_pred HHHHHHHHHHhC---cccHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhc--CCC
Confidence 777777776652 2245567777777777777 78888887777664 455
No 16
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.58 E-value=7.5e-13 Score=144.97 Aligned_cols=198 Identities=11% Similarity=0.004 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHH
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~y 162 (902)
+..|..+...+...|++++|...|+++.+.. +.+..++..+ ...+...|++++|...|+.+.+.+ +-+...|
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~~------a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~ 74 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGD-PDNYIAYYRR------ATVFLAMGKSKAALPDLTKVIALK-MDFTAAR 74 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-cccHHHHHHH------HHHHHHccCHHHHHHHHHHHHHhC-CCcchHH
Confidence 4456666666666677777777776666542 1245555555 666666677777777766665543 3355666
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHCCCCC----CHHHHHHH------------HHHHHHcCChhHHHHHHHhcccCCCc
Q psy767 163 NALIYGHSQANDMASAEGILTMMSQAGLEP----SAQTYTKL------------MCGYAKHGDMDSIKTKIPSLKPQSEL 226 (902)
Q Consensus 163 n~Li~~~~~~g~~~~A~~l~~~M~~~g~~p----d~~ty~~l------------l~a~~~~g~~~~a~~l~~~~~~~~~~ 226 (902)
..+...|...|++++|...|++..+. .| +...+..+ ...+...|++++|...++.+....+
T Consensus 75 ~~l~~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~- 151 (359)
T 3ieg_A 75 LQRGHLLLKQGKLDEAEDDFKKVLKS--NPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCV- 151 (359)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHhc--CCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-
Confidence 66666666777777777777666654 34 22233333 3566666777777766666655332
Q ss_pred cchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhcc
Q psy767 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292 (902)
Q Consensus 227 ~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~ 292 (902)
.+...+..+..++...|++++|...++...... +.+..+|..+...|...|++++|...|++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 216 (359)
T 3ieg_A 152 WDAELRELRAECFIKEGEPRKAISDLKAASKLK-SDNTEAFYKISTLYYQLGDHELSLSEVRECLK 216 (359)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 223445555555666677777777776666543 44566666666777777777777777766544
No 17
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.58 E-value=1.4e-13 Score=151.28 Aligned_cols=182 Identities=15% Similarity=0.127 Sum_probs=38.7
Q ss_pred CCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHH
Q psy767 55 SEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134 (902)
Q Consensus 55 ~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~ 134 (902)
+.|++++|...++.... | .+|..+..++.+.|++++|.+.|.+. +|..+|..+ +..+
T Consensus 15 ~~~~ld~A~~fae~~~~---------~--~vWs~La~A~l~~g~~~eAIdsfika------~D~~~y~~V------~~~a 71 (449)
T 1b89_A 15 HIGNLDRAYEFAERCNE---------P--AVWSQLAKAQLQKGMVKEAIDSYIKA------DDPSSYMEV------VQAA 71 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HccCHHHHHHHHHhCCC---------h--HHHHHHHHHHHHcCCHHHHHHHHHcC------CCHHHHHHH------HHHH
Confidence 56778888888888865 4 37888888888888888888888652 466678888 8888
Q ss_pred HHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHH
Q psy767 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214 (902)
Q Consensus 135 ~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~ 214 (902)
...|++++|...++...+. .+++.+.+.++.+|++.|+++++.++++ .|+..+|..+...|...|.+++|.
T Consensus 72 e~~g~~EeAi~yl~~ark~--~~~~~i~~~Li~~Y~Klg~l~e~e~f~~-------~pn~~a~~~IGd~~~~~g~yeeA~ 142 (449)
T 1b89_A 72 NTSGNWEELVKYLQMARKK--ARESYVETELIFALAKTNRLAELEEFIN-------GPNNAHIQQVGDRCYDEKMYDAAK 142 (449)
T ss_dssp ---------------------------------------CHHHHTTTTT-------CC----------------CTTTHH
T ss_pred HhCCCHHHHHHHHHHHHHh--CccchhHHHHHHHHHHhCCHHHHHHHHc-------CCcHHHHHHHHHHHHHcCCHHHHH
Confidence 8888888888866655553 4456778888888888888888888875 367778888888888888888888
Q ss_pred HHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHH
Q psy767 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283 (902)
Q Consensus 215 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A 283 (902)
..|..+ ..|..+...+.+.|++++|.+.+..+ .+..+|..++.+|...|+++.|
T Consensus 143 ~~Y~~a---------~n~~~LA~~L~~Lg~yq~AVea~~KA------~~~~~Wk~v~~aCv~~~ef~lA 196 (449)
T 1b89_A 143 LLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKA------NSTRTWKEVCFACVDGKEFRLA 196 (449)
T ss_dssp HHHHHT---------TCHHHHHHHHHTTTCHHHHHHHHHHH------TCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHh---------hhHHHHHHHHHHhccHHHHHHHHHHc------CCchhHHHHHHHHHHcCcHHHH
Confidence 887765 23334444444444444444444443 1334444444444444444444
No 18
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.57 E-value=1.2e-12 Score=141.64 Aligned_cols=285 Identities=8% Similarity=-0.041 Sum_probs=227.1
Q ss_pred CCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCC
Q psy767 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS 158 (902)
Q Consensus 79 ~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~ 158 (902)
.+.+...+..+...+...|++++|..+|+++.+... .+...+..+ +..+...|++++|..+++.+.+.. +.+
T Consensus 18 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p-~~~~~~~~~------~~~~~~~~~~~~A~~~~~~~~~~~-~~~ 89 (330)
T 3hym_B 18 LQENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKDP-FHASCLPVH------IGTLVELNKANELFYLSHKLVDLY-PSN 89 (330)
T ss_dssp --CCCTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCTTTHHHH------HHHHHHHTCHHHHHHHHHHHHHHC-TTS
T ss_pred chhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-CChhhHHHH------HHHHHHhhhHHHHHHHHHHHHHhC-cCC
Confidence 445566677889999999999999999999987642 244455566 888899999999999999998764 556
Q ss_pred HHHHHHHHHHHHhCC-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHH
Q psy767 159 EGVFNALIYGHSQAN-DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237 (902)
Q Consensus 159 ~~~yn~Li~~~~~~g-~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~ 237 (902)
...|..+...+...| ++++|...|+...+.. ..+...|..+...+...|++++|...++........ ....+..+..
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~ 167 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATTLE-KTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGL 167 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHTTC-TTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHH
Confidence 788999999999999 9999999999998874 235678999999999999999999999998775443 2344555777
Q ss_pred HHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHH
Q psy767 238 LILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317 (902)
Q Consensus 238 ~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~ 317 (902)
.+...|++++|...+++..... +.+..+|..+...|...|++++|...|++.......
T Consensus 168 ~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~--------------------- 225 (330)
T 3hym_B 168 EYGLTNNSKLAERFFSQALSIA-PEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKA--------------------- 225 (330)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT---------------------
T ss_pred HHHHHhhHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhh---------------------
Confidence 7888999999999999998865 567889999999999999999999999974221000
Q ss_pred HHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCcc-cHHHHHHHHHHcCChH
Q psy767 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVNG-DYLDIIHALAVSGHGE 395 (902)
Q Consensus 318 ~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~~-~~~~li~~~~~~g~~~ 395 (902)
.-.......+..+|..+..+|...|++++|...|++. ...|..+ .|..+...+...|+++
T Consensus 226 ------------------~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~ 287 (330)
T 3hym_B 226 ------------------IGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFE 287 (330)
T ss_dssp ------------------TSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHH
T ss_pred ------------------ccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHH
Confidence 0001112345678999999999999999999999983 3333333 3888999999999999
Q ss_pred HHHHHHHHcccCCCCCCCHHH
Q psy767 396 YIDEIISKIQPGVGYSADAAN 416 (902)
Q Consensus 396 ~A~~l~~~m~~~~g~~pd~~t 416 (902)
+|.+.|++..+ +.|+...
T Consensus 288 ~A~~~~~~al~---~~p~~~~ 305 (330)
T 3hym_B 288 NAVDYFHTALG---LRRDDTF 305 (330)
T ss_dssp HHHHHHHTTTT---TCSCCHH
T ss_pred HHHHHHHHHHc---cCCCchH
Confidence 99999999987 6776543
No 19
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.52 E-value=9.3e-13 Score=145.35 Aligned_cols=127 Identities=11% Similarity=-0.064 Sum_probs=84.8
Q ss_pred ccCCCCCCcCcc-cccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHH
Q psy767 53 WCSEPSLGPGNL-PCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLI 131 (902)
Q Consensus 53 ~~~~g~~~~A~~-~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li 131 (902)
+.-.|+++.|.. .|...... .......+...|..+...|.+.|++++|...|+++.+.. +.+..+|..+ .
T Consensus 35 ~~~~~~~~~a~~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l------~ 105 (368)
T 1fch_A 35 HPWLSDYDDLTSATYDKGYQF--EEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQD-PKHMEAWQYL------G 105 (368)
T ss_dssp -----------CHHHHCCCCC--CSSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHH------H
T ss_pred hHHHHHHHHHHhhhhhHHHhc--CCCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHH------H
Confidence 334467777776 66555441 000111134557778888888888888888888888764 2356677777 8
Q ss_pred HHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCC
Q psy767 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189 (902)
Q Consensus 132 ~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g 189 (902)
..|.+.|++++|...|+.+.+.+ +.+..+|..+...|...|++++|++.|+++....
T Consensus 106 ~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 162 (368)
T 1fch_A 106 TTQAENEQELLAISALRRCLELK-PDNQTALMALAVSFTNESLQRQACEILRDWLRYT 162 (368)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHCcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 88888888888888888887765 5577888888888888888888888888888763
No 20
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.51 E-value=1.7e-12 Score=138.82 Aligned_cols=273 Identities=8% Similarity=-0.021 Sum_probs=210.5
Q ss_pred HHHHHHCCCchHHHHHHHHHHHCCCCCCH--HHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHH
Q psy767 90 LRVYLDNEHTFSPTDFLAKLESQGIEPNR--VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167 (902)
Q Consensus 90 i~~~~~~g~~~~A~~l~~~M~~~g~~pd~--~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~ 167 (902)
|+-....|++..|+..++.... ..|+. .....+ ..+|...|+++.|...++. . -+|+..++..+..
T Consensus 6 ~~~~~~~g~y~~ai~~~~~~~~--~~p~~~~e~~~~l------~r~yi~~g~~~~al~~~~~---~-~~~~~~a~~~la~ 73 (291)
T 3mkr_A 6 VKNAFYIGSYQQCINEAQRVKP--SSPERDVERDVFL------YRAYLAQRKYGVVLDEIKP---S-SAPELQAVRMFAE 73 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCC--CSHHHHHHHHHHH------HHHHHHTTCHHHHHHHSCT---T-SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccc--CCchhhHHHHHHH------HHHHHHCCCHHHHHHHhcc---c-CChhHHHHHHHHH
Confidence 3445568999999998877643 34543 233445 8899999999999986644 2 4678889999999
Q ss_pred HHHhCCCHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHH
Q psy767 168 GHSQANDMASAEGILTMMSQAGLEPSA-QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246 (902)
Q Consensus 168 ~~~~~g~~~~A~~l~~~M~~~g~~pd~-~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 246 (902)
.+...|+.++|++.|+++...+..|+. ..+..+..++...|++++|.+.++. ..+...+..+..++...|+++
T Consensus 74 ~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~------~~~~~~~~~l~~~~~~~g~~~ 147 (291)
T 3mkr_A 74 YLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ------GDSLECMAMTVQILLKLDRLD 147 (291)
T ss_dssp HHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT------CCSHHHHHHHHHHHHHTTCHH
T ss_pred HHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC------CCCHHHHHHHHHHHHHCCCHH
Confidence 999999999999999999988766754 4566667899999999999999998 345567777788888999999
Q ss_pred HHHHHHHHHHHCCCCCCHHHH---HHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHH
Q psy767 247 SAEGILTMMSQAGLEPSAQTY---TKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVC 323 (902)
Q Consensus 247 ~A~~l~~~m~~~g~~pd~~ty---~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~ 323 (902)
+|...|+.+.+.. |+.... .+.+..+...|++++|+.+|+++
T Consensus 148 ~A~~~l~~~~~~~--p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~--------------------------------- 192 (291)
T 3mkr_A 148 LARKELKKMQDQD--EDATLTQLATAWVSLAAGGEKLQDAYYIFQEM--------------------------------- 192 (291)
T ss_dssp HHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHH---------------------------------
T ss_pred HHHHHHHHHHhhC--cCcHHHHHHHHHHHHHhCchHHHHHHHHHHHH---------------------------------
Confidence 9999999998874 553322 22334444568999999999974
Q ss_pred HhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH-cCCCCCccc-HHHHHHHHHHcCChHH-HHHH
Q psy767 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ-NGSSLVNGD-YLDIIHALAVSGHGEY-IDEI 400 (902)
Q Consensus 324 ~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~-m~~~~~~~~-~~~li~~~~~~g~~~~-A~~l 400 (902)
... .+.+..+|+.+..+|.+.|++++|...|++ +...|..+. +..++..+...|+.++ +.++
T Consensus 193 --------------l~~-~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~ 257 (291)
T 3mkr_A 193 --------------ADK-CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRY 257 (291)
T ss_dssp --------------HHH-SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred --------------HHh-CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 222 345788999999999999999999999998 555566554 7889999999999965 6789
Q ss_pred HHHcccCCCCCCCHHHHHHHHHHcCCHHHHHHH
Q psy767 401 ISKIQPGVGYSADAANHIYHLINKGQIDAAYRI 433 (902)
Q Consensus 401 ~~~m~~~~g~~pd~~t~i~~l~~~g~~~~A~~~ 433 (902)
++++.+ +.|+...+.....+.+.++++..-
T Consensus 258 ~~~~~~---~~P~~~~~~d~~~~~~~fd~~~~~ 287 (291)
T 3mkr_A 258 LSQLKD---AHRSHPFIKEYRAKENDFDRLVLQ 287 (291)
T ss_dssp HHHHHH---HCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH---hCCCChHHHHHHHHHHHHHHHHHH
Confidence 999988 888887766655555555555443
No 21
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.49 E-value=1.7e-12 Score=143.39 Aligned_cols=197 Identities=11% Similarity=-0.010 Sum_probs=134.5
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV 161 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~ 161 (902)
+...|..+...+.+.|++++|..+|+++.+.. +.+..+|..+ ...|.+.|++++|...|+...+.+ +.+..+
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l------g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~ 135 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQD-PGDAEAWQFL------GITQAENENEQAAIVALQRCLELQ-PNNLKA 135 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-cCCHHHHHHH------HHHHHHCCCHHHHHHHHHHHHhcC-CCCHHH
Confidence 45668889999999999999999999998764 3367788888 999999999999999999988765 556889
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCH-----------HHHHHHHHHHHHcCChhHHHHHHHhcccCCCcc-ch
Q psy767 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSA-----------QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF-LC 229 (902)
Q Consensus 162 yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~-----------~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~-~~ 229 (902)
|..+...|.+.|++++|+..|+++.+.. |+. ..+..+...+...|++++|...++.+....... +.
T Consensus 136 ~~~l~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 213 (365)
T 4eqf_A 136 LMALAVSYTNTSHQQDACEALKNWIKQN--PKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDP 213 (365)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC--HHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCH
T ss_pred HHHHHHHHHccccHHHHHHHHHHHHHhC--ccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCH
Confidence 9999999999999999999999998752 332 223334566677777777777776665543221 33
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 230 ~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~ 289 (902)
..+..+..++...|++++|...|++..+.. +.+..+|+.+...|.+.|++++|+..|++
T Consensus 214 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 272 (365)
T 4eqf_A 214 DLQTGLGVLFHLSGEFNRAIDAFNAALTVR-PEDYSLWNRLGATLANGDRSEEAVEAYTR 272 (365)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 444445555555566666666665555442 33455555555666666666666665554
No 22
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.48 E-value=1e-11 Score=134.37 Aligned_cols=265 Identities=9% Similarity=0.001 Sum_probs=214.0
Q ss_pred CCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCH
Q psy767 115 EPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194 (902)
Q Consensus 115 ~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~ 194 (902)
..+...+..+ ...+...|++++|..+|+.+...+ +.+...+..++..+...|++++|..+++++.+.. ..+.
T Consensus 19 ~~~~~~~~~~------a~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~ 90 (330)
T 3hym_B 19 QENLDVVVSL------AERHYYNCDFKMCYKLTSVVMEKD-PFHASCLPVHIGTLVELNKANELFYLSHKLVDLY-PSNP 90 (330)
T ss_dssp -CCCTTHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTST
T ss_pred hhhHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHcC-CCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhC-cCCH
Confidence 4455566667 888999999999999999998765 5566788888999999999999999999998864 2356
Q ss_pred HHHHHHHHHHHHcC-ChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q psy767 195 QTYTKLMCGYAKHG-DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCG 273 (902)
Q Consensus 195 ~ty~~ll~a~~~~g-~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a 273 (902)
..|..+...+...| ++++|...|+........ ....+..+..++...|++++|...+++..... +.+...+..+...
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~ 168 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTLEKT-YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLM-KGCHLPMLYIGLE 168 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTT-CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHT-TTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhc-cccHHHHHHHHHH
Confidence 78889999999999 999999999998876533 34567777888888999999999999998865 4456778889999
Q ss_pred HHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHH
Q psy767 274 YAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353 (902)
Q Consensus 274 ~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li 353 (902)
|...|++++|.+.|++.... .+.+..++..+.
T Consensus 169 ~~~~~~~~~A~~~~~~al~~------------------------------------------------~~~~~~~~~~l~ 200 (330)
T 3hym_B 169 YGLTNNSKLAERFFSQALSI------------------------------------------------APEDPFVMHEVG 200 (330)
T ss_dssp HHHTTCHHHHHHHHHHHHTT------------------------------------------------CTTCHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHh------------------------------------------------CCCChHHHHHHH
Confidence 99999999999999974321 123567889999
Q ss_pred HHHHHcCCHHHHHHHHHHcCC-----------CCCcccHHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHH----HH
Q psy767 354 CGYAKHGDMDSIRRLLAQNGS-----------SLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAAN----HI 418 (902)
Q Consensus 354 ~~y~~~g~~~~A~~~~~~m~~-----------~~~~~~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t----~i 418 (902)
..|...|++++|...|++... ......|..+...+...|++++|.+.|++..+ ..|+... +.
T Consensus 201 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~---~~~~~~~~~~~la 277 (330)
T 3hym_B 201 VVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALV---LIPQNASTYSAIG 277 (330)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHH---HSTTCSHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh---hCccchHHHHHHH
Confidence 999999999999999987311 11223488899999999999999999999987 3444322 44
Q ss_pred HHHHHcCCHHHHHHHHHHHHhc
Q psy767 419 YHLINKGQIDAAYRIVNTLARS 440 (902)
Q Consensus 419 ~~l~~~g~~~~A~~~~~~m~~~ 440 (902)
..+...|++++|...|++..+.
T Consensus 278 ~~~~~~g~~~~A~~~~~~al~~ 299 (330)
T 3hym_B 278 YIHSLMGNFENAVDYFHTALGL 299 (330)
T ss_dssp HHHHHHTCHHHHHHHHHTTTTT
T ss_pred HHHHHhccHHHHHHHHHHHHcc
Confidence 5567999999999999988664
No 23
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.47 E-value=5.3e-10 Score=128.92 Aligned_cols=354 Identities=12% Similarity=-0.000 Sum_probs=266.6
Q ss_pred CCHHHHHHHHHHHHH----CCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHH----cCCHHHHHHHHHHhhh
Q psy767 81 LDISHYNALLRVYLD----NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ----DGNIEGATKILEFMRD 152 (902)
Q Consensus 81 pd~~~yn~li~~~~~----~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~----~g~~~~A~~l~~~m~~ 152 (902)
-+...+..+-..|.. .+++++|...|++..+.| +...+..+ -..|.. .+++++|...|+...+
T Consensus 37 g~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~L------g~~y~~g~g~~~~~~~A~~~~~~a~~ 107 (490)
T 2xm6_A 37 GEAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQG---YTPAEYVL------GLRYMNGEGVPQDYAQAVIWYKKAAL 107 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHH------HHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHCC---CHHHHHHH------HHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 367777788888888 889999999999988765 55667777 777887 8999999999999888
Q ss_pred CCCCCCHHHHHHHHHHHHh----CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH----cCChhHHHHHHHhcccCC
Q psy767 153 KTFPISEGVFNALIYGHSQ----ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSIKTKIPSLKPQS 224 (902)
Q Consensus 153 ~~~~p~~~~yn~Li~~~~~----~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~----~g~~~~a~~l~~~~~~~~ 224 (902)
.| +...+..|-..|.. .+++++|+..|+...+.| +...+..|-..|.. .++.++|.+.|+.....+
T Consensus 108 ~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 108 KG---LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQG---RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp TT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred CC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 76 45777778888887 789999999999998876 56777777777877 788999999988877654
Q ss_pred CccchhhHHHHHHHHHh----cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHhccCCCC
Q psy767 225 ELFLCFSFQLTNLLILV----SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSVRRLLAQSGSSLVN 296 (902)
Q Consensus 225 ~~~~~~~~~~~~~~~~~----~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~----~g~~~~A~~lf~~m~~~~~~ 296 (902)
+...+..+..++.. .++.++|...|+...+.| +...+..+...|.. .+++++|.++|++....
T Consensus 182 ---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~--- 252 (490)
T 2xm6_A 182 ---NVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSG---DELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQ--- 252 (490)
T ss_dssp ---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTT---
T ss_pred ---CHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC---
Confidence 34555566666666 788999999998888765 56677777777776 78888898888863222
Q ss_pred CCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHc
Q psy767 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSIRRLLAQN 372 (902)
Q Consensus 297 p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~----~g~~~~A~~~~~~m 372 (902)
.+...+..|-..|.. .++.++|...|++.
T Consensus 253 -----------------------------------------------~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a 285 (490)
T 2xm6_A 253 -----------------------------------------------GNSIAQFRLGYILEQGLAGAKEPLKALEWYRKS 285 (490)
T ss_dssp -----------------------------------------------TCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHH
T ss_pred -----------------------------------------------CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Confidence 134455566666777 88999999999986
Q ss_pred CCCCCcccHHHHHHHHHHc-----CChHHHHHHHHHcccCCCCCCCHHH-HHHHHHHcC---CHHHHHHHHHHHHhccCC
Q psy767 373 GSSLVNGDYLDIIHALAVS-----GHGEYIDEIISKIQPGVGYSADAAN-HIYHLINKG---QIDAAYRIVNTLARSANI 443 (902)
Q Consensus 373 ~~~~~~~~~~~li~~~~~~-----g~~~~A~~l~~~m~~~~g~~pd~~t-~i~~l~~~g---~~~~A~~~~~~m~~~~~i 443 (902)
...+....+..+...|... +++++|.+.|++..+ .+. ++... +-..+...| +.++|.++|++..+..
T Consensus 286 ~~~~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~-~~~-~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~~-- 361 (490)
T 2xm6_A 286 AEQGNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAE-QGD-ATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAKG-- 361 (490)
T ss_dssp HTTTCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHH-TTC-HHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTT--
T ss_pred HHcCCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHh-cCC-HHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHCC--
Confidence 5555555577788888877 899999999999887 432 22222 333344545 7889999998887641
Q ss_pred CCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHh----cCChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHH-
Q psy767 444 NGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLIN----KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVK- 518 (902)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k----~g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~- 518 (902)
.....+++-..|.. .++.++|...|+.....+ .+..+..+...|..
T Consensus 362 ------------------------~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~-----~~~a~~~Lg~~y~~g 412 (490)
T 2xm6_A 362 ------------------------EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG-----LSAAQVQLGEIYYYG 412 (490)
T ss_dssp ------------------------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHT
T ss_pred ------------------------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC-----CHHHHHHHHHHHHcC
Confidence 11124456566777 789999999999988764 24567778888877
Q ss_pred ---cCCCHHHHHHHHHHHHHCCCC
Q psy767 519 ---TNQPIDKVLAVCHRLTDENLH 539 (902)
Q Consensus 519 ---~g~~~~~A~~l~~~m~~~g~~ 539 (902)
.++ .++|...|++..+.|..
T Consensus 413 ~g~~~d-~~~A~~~~~~A~~~~~~ 435 (490)
T 2xm6_A 413 LGVERD-YVQAWAWFDTASTNDMN 435 (490)
T ss_dssp SSSCCC-HHHHHHHHHHHHHHHCC
T ss_pred CCCCCC-HHHHHHHHHHHHHCCCC
Confidence 677 99999999998887644
No 24
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.47 E-value=2.6e-12 Score=141.75 Aligned_cols=283 Identities=10% Similarity=-0.033 Sum_probs=214.0
Q ss_pred HHCCCchHHHH-HHHHHHHCCC-CC--CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHH
Q psy767 94 LDNEHTFSPTD-FLAKLESQGI-EP--NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169 (902)
Q Consensus 94 ~~~g~~~~A~~-l~~~M~~~g~-~p--d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~ 169 (902)
.-.|++++|.. .|++...... .| +...+..+ ...+.+.|++++|...|+.+.+.+ +.+..+|..+..+|
T Consensus 36 ~~~~~~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~ 108 (368)
T 1fch_A 36 PWLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEE------GLRRLQEGDLPNAVLLFEAAVQQD-PKHMEAWQYLGTTQ 108 (368)
T ss_dssp ----------CHHHHCCCCCCSSCTTTTCSSHHHH------HHHHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhHHHhcCCCCcccchHHHHHH------HHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHH
Confidence 34578888888 7776543211 11 34556677 889999999999999999999875 66788999999999
Q ss_pred HhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHH---------------H
Q psy767 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ---------------L 234 (902)
Q Consensus 170 ~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~---------------~ 234 (902)
.+.|++++|+..|+++.+.. ..+..++..+...|...|++++|...++.+............. .
T Consensus 109 ~~~g~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (368)
T 1fch_A 109 AENEQELLAISALRRCLELK-PDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRI 187 (368)
T ss_dssp HHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CT
T ss_pred HHCcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHH
Confidence 99999999999999998875 3477899999999999999999999999988765443322221 1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcc
Q psy767 235 TNLLILVSSDMASAEGILTMMSQAGLE-PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313 (902)
Q Consensus 235 ~~~~~~~~g~~~~A~~l~~~m~~~g~~-pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~ 313 (902)
+..++ ..|++++|...|+++....-. ++..+|..+...|.+.|++++|...|++...
T Consensus 188 ~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~--------------------- 245 (368)
T 1fch_A 188 LGSLL-SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALS--------------------- 245 (368)
T ss_dssp THHHH-HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---------------------
T ss_pred HHHHh-hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---------------------
Confidence 33333 789999999999999886422 1588999999999999999999999997321
Q ss_pred cHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCcc-cHHHHHHHHHHc
Q psy767 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVNG-DYLDIIHALAVS 391 (902)
Q Consensus 314 ~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~~-~~~~li~~~~~~ 391 (902)
. .+.+..+|..+...|...|++++|...|++. ...|..+ .|..+...|...
T Consensus 246 --------------------------~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 298 (368)
T 1fch_A 246 --------------------------V-RPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINL 298 (368)
T ss_dssp --------------------------H-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred --------------------------h-CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC
Confidence 1 1235678999999999999999999999983 3333333 388899999999
Q ss_pred CChHHHHHHHHHcccCCCCCCCH-----------H----HHHHHHHHcCCHHHHHHHHHH
Q psy767 392 GHGEYIDEIISKIQPGVGYSADA-----------A----NHIYHLINKGQIDAAYRIVNT 436 (902)
Q Consensus 392 g~~~~A~~l~~~m~~~~g~~pd~-----------~----t~i~~l~~~g~~~~A~~~~~~ 436 (902)
|++++|.+.|++... +.|+. . .+..++...|+.++|..++.+
T Consensus 299 g~~~~A~~~~~~al~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 355 (368)
T 1fch_A 299 GAHREAVEHFLEALN---MQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADAR 355 (368)
T ss_dssp TCHHHHHHHHHHHHH---HHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHTT
T ss_pred CCHHHHHHHHHHHHH---hCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHHH
Confidence 999999999998876 33322 2 245567799999999988764
No 25
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.45 E-value=1.5e-12 Score=143.03 Aligned_cols=352 Identities=9% Similarity=0.017 Sum_probs=158.7
Q ss_pred CccchHHhhcHHHHHHHhccccchhHHHHHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHH
Q psy767 15 VGITTEVSEATAEVTTVLGALGAFLVLLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYL 94 (902)
Q Consensus 15 ~g~~~~~s~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~ 94 (902)
+....+..+..++|...+....+ .-+|..++.++.+.|++.+|...|... +|...|..++.++.
T Consensus 9 ~~~ll~~~~~ld~A~~fae~~~~-----~~vWs~La~A~l~~g~~~eAIdsfika-----------~D~~~y~~V~~~ae 72 (449)
T 1b89_A 9 VQVLIEHIGNLDRAYEFAERCNE-----PAVWSQLAKAQLQKGMVKEAIDSYIKA-----------DDPSSYMEVVQAAN 72 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHccCHHHHHHHHHhCCC-----hHHHHHHHHHHHHcCCHHHHHHHHHcC-----------CCHHHHHHHHHHHH
Confidence 44555667778888888877744 248889999999999999999999653 57779999999999
Q ss_pred HCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCC
Q psy767 95 DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND 174 (902)
Q Consensus 95 ~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~ 174 (902)
..|++++|..+++..++. .+++.+.+.+ +.+|++.|+++++.++++ .|+..+|+.+...|...|.
T Consensus 73 ~~g~~EeAi~yl~~ark~--~~~~~i~~~L------i~~Y~Klg~l~e~e~f~~-------~pn~~a~~~IGd~~~~~g~ 137 (449)
T 1b89_A 73 TSGNWEELVKYLQMARKK--ARESYVETEL------IFALAKTNRLAELEEFIN-------GPNNAHIQQVGDRCYDEKM 137 (449)
T ss_dssp --------------------------------------------CHHHHTTTTT-------CC----------------C
T ss_pred hCCCHHHHHHHHHHHHHh--CccchhHHHH------HHHHHHhCCHHHHHHHHc-------CCcHHHHHHHHHHHHHcCC
Confidence 999999999987776663 4567788889 999999999999998884 3677899999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHH
Q psy767 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254 (902)
Q Consensus 175 ~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~ 254 (902)
+++|..+|..+ ..|..+..++.+.|++++|.+.+..+ .++.++..+...+...|+++.|......
T Consensus 138 yeeA~~~Y~~a---------~n~~~LA~~L~~Lg~yq~AVea~~KA------~~~~~Wk~v~~aCv~~~ef~lA~~~~l~ 202 (449)
T 1b89_A 138 YDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKA------NSTRTWKEVCFACVDGKEFRLAQMCGLH 202 (449)
T ss_dssp TTTHHHHHHHT---------TCHHHHHHHHHTTTCHHHHHHHHHHH------TCHHHHHHHHHHHHHTTCHHHHHHTTTT
T ss_pred HHHHHHHHHHh---------hhHHHHHHHHHHhccHHHHHHHHHHc------CCchhHHHHHHHHHHcCcHHHHHHHHHH
Confidence 99999999977 38999999999999999999999988 2467788888899999999999655443
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCC-CCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccc
Q psy767 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL-VNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333 (902)
Q Consensus 255 m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~-~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~ 333 (902)
+..+..-...++..|.+.|++++|..+++...... --....|-+..+-..-+++.+.+...++
T Consensus 203 -----L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~----------- 266 (449)
T 1b89_A 203 -----IVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELF----------- 266 (449)
T ss_dssp -----TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHH-----------
T ss_pred -----HHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-----------
Confidence 22333445579999999999999999999865433 1111333333343344455554444432
Q ss_pred cchHHhcCCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCChHHHHHHHHHcccC
Q psy767 334 GPMMSQAGLEP------SAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407 (902)
Q Consensus 334 ~~~m~~~g~~p------~~~t~~~Li~~y~~~g~~~~A~~~~~~m~~~~~~~~~~~li~~~~~~g~~~~A~~l~~~m~~~ 407 (902)
-.+..++| +...|..++-.|.+.++++.|....-+ ..+..-.-..+.....+-.+.+--.+...--..
T Consensus 267 ---~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e~d~A~~tm~~--h~~~a~~~~~f~~~~~kv~n~elyYkai~fyl~- 340 (449)
T 1b89_A 267 ---WSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN--HPTDAWKEGQFKDIITKVANVELYYRAIQFYLE- 340 (449)
T ss_dssp ---STTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHHHHHHH--STTTTCCHHHHHHHHHHCSSTHHHHHHHHHHHH-
T ss_pred ---HHHhcCcHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHh--CChhhhhhHHHHHHHhchhHHHHHHHHHHHHHh-
Confidence 12233333 456788999999999999988876433 222333344556666666666544444443333
Q ss_pred CCCCCCHHH-HHHHHHHcCCHHHHHHHHHH
Q psy767 408 VGYSADAAN-HIYHLINKGQIDAAYRIVNT 436 (902)
Q Consensus 408 ~g~~pd~~t-~i~~l~~~g~~~~A~~~~~~ 436 (902)
..|...+ ++.++...=+...+..+|++
T Consensus 341 --~~p~~l~~ll~~l~~~ld~~r~v~~~~~ 368 (449)
T 1b89_A 341 --FKPLLLNDLLMVLSPRLDHTRAVNYFSK 368 (449)
T ss_dssp --HCGGGHHHHHHHHGGGCCHHHHHHHHHH
T ss_pred --cCHHHHHHHHHHHHhccCcHHHHHHHHH
Confidence 4555554 45555555555555555544
No 26
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.44 E-value=4.2e-10 Score=131.20 Aligned_cols=405 Identities=11% Similarity=0.046 Sum_probs=270.7
Q ss_pred CCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHH
Q psy767 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG 160 (902)
Q Consensus 81 pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~ 160 (902)
-|...|..++. +.+.|++++|..+|+++.+.- +-+...|... +..+.+.|+++.|..+|+...... |+..
T Consensus 11 ~~~~~w~~l~~-~~~~~~~~~a~~~~e~al~~~-P~~~~~w~~~------~~~~~~~~~~~~a~~~~~ral~~~--p~~~ 80 (530)
T 2ooe_A 11 YDLDAWSILIR-EAQNQPIDKARKTYERLVAQF-PSSGRFWKLY------IEAEIKAKNYDKVEKLFQRCLMKV--LHID 80 (530)
T ss_dssp TCHHHHHHHHH-HHHSSCHHHHHHHHHHHHTTC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHTTTC--CCHH
T ss_pred CCHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHC-CCCHHHHHHH------HHHHHhcCCHHHHHHHHHHHHhcC--CChH
Confidence 47888999998 578999999999999998642 3356678888 999999999999999999988764 6888
Q ss_pred HHHHHHHHH-HhCCCHHHHHH----HHHHHHH-CCCCC-CHHHHHHHHHHHHH---------cCChhHHHHHHHhcccCC
Q psy767 161 VFNALIYGH-SQANDMASAEG----ILTMMSQ-AGLEP-SAQTYTKLMCGYAK---------HGDMDSIKTKIPSLKPQS 224 (902)
Q Consensus 161 ~yn~Li~~~-~~~g~~~~A~~----l~~~M~~-~g~~p-d~~ty~~ll~a~~~---------~g~~~~a~~l~~~~~~~~ 224 (902)
.|...+... ...|+.+.|.+ +|+.... .|..| +...|...+....+ .|+++.|..+|+......
T Consensus 81 lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~g~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~a~~~y~~al~~P 160 (530)
T 2ooe_A 81 LWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP 160 (530)
T ss_dssp HHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHSCCCSSTTHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHhcCCCcccHHHHhHHHHHHHHHHHHHhch
Confidence 888777533 45677776655 7776654 36554 45677777766554 688999999999988842
Q ss_pred CccchhhHHHHHHHH-------------HhcCCHHHHHHHHHHHH------HCC---CCCC--------HHHHHHHHHHH
Q psy767 225 ELFLCFSFQLTNLLI-------------LVSSDMASAEGILTMMS------QAG---LEPS--------AQTYTKLMCGY 274 (902)
Q Consensus 225 ~~~~~~~~~~~~~~~-------------~~~g~~~~A~~l~~~m~------~~g---~~pd--------~~ty~~LI~a~ 274 (902)
.......+..+..+. ...+++..|..++..+. +.. ++|+ ...|...+...
T Consensus 161 ~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~A~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~w~~~~~~e 240 (530)
T 2ooe_A 161 MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQWE 240 (530)
T ss_dssp CTTHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCSSSCCCCCC--CCHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhhchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHH
Confidence 222222222222211 12456777777777632 221 3444 35666666443
Q ss_pred HHc----CCH----HHHHHHHHHhccC-CCCCC-HHHHHHHHHH-------cCCccc----HHHHHHHHHHhhhhhcccc
Q psy767 275 AKH----GDM----DSVRRLLAQSGSS-LVNGD-YLDIIHALAV-------SGHGEY----IDEVSAIVCFVNICFHWLE 333 (902)
Q Consensus 275 ~~~----g~~----~~A~~lf~~m~~~-~~~p~-~~tl~~~l~~-------~~~~~~----~~~~~~l~~~~~~~~~~~~ 333 (902)
... ++. .+|..+|++.... +..+. |..+...+.. .++.+. .+.+..++.
T Consensus 241 ~~~~~~~~~~~~~~~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~---------- 310 (530)
T 2ooe_A 241 KSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYE---------- 310 (530)
T ss_dssp HHCSSCCSCSHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHH----------
T ss_pred HcCCccCCcchhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHH----------
Confidence 332 232 4777888886553 22222 4444444443 233321 113333221
Q ss_pred cchHHhcCCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCcc--cHHHHHHHHHHcCChHHHHHHHHHcccCCC
Q psy767 334 GPMMSQAGLEP-SAQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVNG--DYLDIIHALAVSGHGEYIDEIISKIQPGVG 409 (902)
Q Consensus 334 ~~~m~~~g~~p-~~~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~~--~~~~li~~~~~~g~~~~A~~l~~~m~~~~g 409 (902)
... ..+.| +...|..++..+.+.|++++|..+|++. ...|..+ .|..++..+.+.|+.++|.++|++..+.
T Consensus 311 --~Al-~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~-- 385 (530)
T 2ooe_A 311 --RAI-STLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED-- 385 (530)
T ss_dssp --HHT-TTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred --HHH-HHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--
Confidence 111 12345 5889999999999999999999999983 4444443 4888888888999999999999999873
Q ss_pred CCCCHHH--HHHH---HHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHhcCC
Q psy767 410 YSADAAN--HIYH---LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQ 484 (902)
Q Consensus 410 ~~pd~~t--~i~~---l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k~g~ 484 (902)
.|+... +..+ +...|++++|..+|+...+..+ ..+. ....++..+.+.|+
T Consensus 386 -~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p---~~~~---------------------~~~~~~~~~~~~g~ 440 (530)
T 2ooe_A 386 -ARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYG---DIPE---------------------YVLAYIDYLSHLNE 440 (530)
T ss_dssp -TTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHT---TCHH---------------------HHHHHHHHHTTTTC
T ss_pred -cCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCC---CCHH---------------------HHHHHHHHHHhCCC
Confidence 343222 1111 2368999999999999887642 2111 13345556778899
Q ss_pred hHHHHHHHHHHHHccCCCC-CccchHHHHHHHHHHcCCCHHHHHHHHHHHHHC
Q psy767 485 IDAAYRIVNTLARSANING-EQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDE 536 (902)
Q Consensus 485 ~~~A~~l~~~m~~~~~~~~-~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~ 536 (902)
.++|..+|+........++ .....|...+......|. .+.+..++.++.+.
T Consensus 441 ~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~-~~~~~~~~~r~~~~ 492 (530)
T 2ooe_A 441 DNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGD-LASILKVEKRRFTA 492 (530)
T ss_dssp HHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHHHHSSC-HHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHH
Confidence 9999999999988643222 233478888888889998 99999999997664
No 27
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.42 E-value=2.2e-09 Score=123.66 Aligned_cols=367 Identities=12% Similarity=-0.003 Sum_probs=276.3
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHH----cCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHh----C
Q psy767 101 SPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ----DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ----A 172 (902)
Q Consensus 101 ~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~----~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~----~ 172 (902)
.++..+....+.| +...+..+ -..|.. .++++.|...|+...+.| +...+..|-..|.. .
T Consensus 25 ~~~~~~~~~a~~g---~~~a~~~l------g~~y~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~ 92 (490)
T 2xm6_A 25 VNLEQLKQKAESG---EAKAQLEL------GYRYFQGNETTKDLTQAMDWFRRAAEQG---YTPAEYVLGLRYMNGEGVP 92 (490)
T ss_dssp CCHHHHHHHHHTT---CHHHHHHH------HHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHHCC---CHHHHHHH------HHHHHcCCCCCcCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCC
Confidence 3455666655544 66677777 777777 899999999999988876 46788888899988 8
Q ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH----cCChhHHHHHHHhcccCCCccchhhHHHHHHHHHh----cCC
Q psy767 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV----SSD 244 (902)
Q Consensus 173 g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~----~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~g~ 244 (902)
++.++|+..|++..+.| +...+..|-..|.. .+++++|...|+.....+ +......+..++.. .++
T Consensus 93 ~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~d 166 (490)
T 2xm6_A 93 QDYAQAVIWYKKAALKG---LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQG---RDSGQQSMGDAYFEGDGVTRD 166 (490)
T ss_dssp CCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCC
T ss_pred CCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999876 66777788888888 889999999999987764 34455555666665 789
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHH
Q psy767 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320 (902)
Q Consensus 245 ~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~----~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~ 320 (902)
.+.|...|+...+.| +...+..|-..|.. .++.++|+++|++..
T Consensus 167 ~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~----------------------------- 214 (490)
T 2xm6_A 167 YVMAREWYSKAAEQG---NVWSCNQLGYMYSRGLGVERNDAISAQWYRKSA----------------------------- 214 (490)
T ss_dssp HHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH-----------------------------
T ss_pred HHHHHHHHHHHHHCC---CHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHH-----------------------------
Confidence 999999999998865 67888888888888 899999999998732
Q ss_pred HHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHcCCCCCcccHHHHHHHHHH----cC
Q psy767 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSIRRLLAQNGSSLVNGDYLDIIHALAV----SG 392 (902)
Q Consensus 321 l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~----~g~~~~A~~~~~~m~~~~~~~~~~~li~~~~~----~g 392 (902)
+.| +...+..|...|.. .+++++|..+|++....+....+..+...|.. .+
T Consensus 215 ------------------~~~---~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~g~~~~~ 273 (490)
T 2xm6_A 215 ------------------TSG---DELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIAQFRLGYILEQGLAGAK 273 (490)
T ss_dssp ------------------HTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTTSSC
T ss_pred ------------------HCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
Confidence 222 45566777777776 78999999999986555555567777788887 88
Q ss_pred ChHHHHHHHHHcccCCCCCCCHHH-HHHHHHHc-----CCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCC
Q psy767 393 HGEYIDEIISKIQPGVGYSADAAN-HIYHLINK-----GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGV 466 (902)
Q Consensus 393 ~~~~A~~l~~~m~~~~g~~pd~~t-~i~~l~~~-----g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 466 (902)
+.++|.+.|++..+ .| .|+... +-..+... ++.++|..++++..+..
T Consensus 274 d~~~A~~~~~~a~~-~~-~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~------------------------- 326 (490)
T 2xm6_A 274 EPLKALEWYRKSAE-QG-NSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQG------------------------- 326 (490)
T ss_dssp CHHHHHHHHHHHHT-TT-CHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTT-------------------------
T ss_pred CHHHHHHHHHHHHH-cC-CHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcC-------------------------
Confidence 99999999999887 43 233332 33344455 79999999999887641
Q ss_pred ccccchHHHHHHHHhcC---ChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHH----cCCCHHHHHHHHHHHHHCCCC
Q psy767 467 GYSADAANHIYHLINKG---QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVK----TNQPIDKVLAVCHRLTDENLH 539 (902)
Q Consensus 467 g~~~~~~~li~~~~k~g---~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~----~g~~~~~A~~l~~~m~~~g~~ 539 (902)
+....+++-..|.+.| +.++|..+|+.....+ ++..+..+...|.. .++ .++|+..|++..+.|
T Consensus 327 -~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~~-----~~~a~~~Lg~~y~~g~g~~~~-~~~A~~~~~~A~~~~-- 397 (490)
T 2xm6_A 327 -DATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAKG-----EKAAQFNLGNALLQGKGVKKD-EQQAAIWMRKAAEQG-- 397 (490)
T ss_dssp -CHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHTSSSCCC-HHHHHHHHHHHHHTT--
T ss_pred -CHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHcCCCCCCC-HHHHHHHHHHHHhCC--
Confidence 1112345555566656 7899999999988763 34577888888887 677 999999999998876
Q ss_pred CChhhHHHHHHHhccc-ccccCcchhhHhhhhhccCcchHHHHHHHHHHhh
Q psy767 540 PRAFNLAVLIKAHVLK-EDYTGAVETFEYCVNQFRATPWKGELLKRFIQAE 589 (902)
Q Consensus 540 Pd~~t~~~ll~a~~~~-~~~~g~~~~~~~~~~~~~a~~~~~~ll~~m~~~g 589 (902)
+...+..|-..+ .+ .+..++.++ |.. +|+...+.+
T Consensus 398 -~~~a~~~Lg~~y-~~g~g~~~d~~~---------A~~----~~~~A~~~~ 433 (490)
T 2xm6_A 398 -LSAAQVQLGEIY-YYGLGVERDYVQ---------AWA----WFDTASTND 433 (490)
T ss_dssp -CHHHHHHHHHHH-HHTSSSCCCHHH---------HHH----HHHHHHHHH
T ss_pred -CHHHHHHHHHHH-HcCCCCCCCHHH---------HHH----HHHHHHHCC
Confidence 355555555444 31 012677788 777 888887776
No 28
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.42 E-value=8.6e-12 Score=137.70 Aligned_cols=261 Identities=8% Similarity=-0.065 Sum_probs=203.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHH
Q psy767 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196 (902)
Q Consensus 117 d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t 196 (902)
+...+..+ ...+.+.|++++|..+|+.+.... +.+..+|..+...|.+.|++++|+..|+++.+.. ..+..+
T Consensus 64 ~~~~~~~~------~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~ 135 (365)
T 4eqf_A 64 DWPGAFEE------GLKRLKEGDLPVTILFMEAAILQD-PGDAEAWQFLGITQAENENEQAAIVALQRCLELQ-PNNLKA 135 (365)
T ss_dssp TCTTHHHH------HHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred chhHHHHH------HHHHHHCCCHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-CCCHHH
Confidence 34457777 889999999999999999998865 6678999999999999999999999999998874 335789
Q ss_pred HHHHHHHHHHcCChhHHHHHHHhcccCCCccch---------hhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCC-CCHHH
Q psy767 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC---------FSFQLTNLLILVSSDMASAEGILTMMSQAGLE-PSAQT 266 (902)
Q Consensus 197 y~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~-pd~~t 266 (902)
|..+...|...|++++|...++.+......... ..+..+...+...|++++|..+|+++....-. ++..+
T Consensus 136 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 215 (365)
T 4eqf_A 136 LMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDL 215 (365)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHH
T ss_pred HHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHH
Confidence 999999999999999999999998764322211 11223456677799999999999999986422 26889
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCH
Q psy767 267 YTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346 (902)
Q Consensus 267 y~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~ 346 (902)
|..+...|.+.|++++|++.|++... . .+.+.
T Consensus 216 ~~~l~~~~~~~g~~~~A~~~~~~al~-----------------------------------------------~-~p~~~ 247 (365)
T 4eqf_A 216 QTGLGVLFHLSGEFNRAIDAFNAALT-----------------------------------------------V-RPEDY 247 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHH-----------------------------------------------H-CTTCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHH-----------------------------------------------h-CCCCH
Confidence 99999999999999999999997321 1 12357
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCcc-cHHHHHHHHHHcCChHHHHHHHHHcccCCCCCCC-----------
Q psy767 347 QTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVNG-DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSAD----------- 413 (902)
Q Consensus 347 ~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~~-~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd----------- 413 (902)
.+|..+..+|.+.|++++|...|++. ...|..+ .|..+...|...|++++|.+.|++..+ +.|+
T Consensus 248 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~---~~~~~~~~~~~~~~~ 324 (365)
T 4eqf_A 248 SLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALS---LQRKSRNQQQVPHPA 324 (365)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHH---HHHCC----------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHH---hCcccCCCcccchhh
Confidence 88999999999999999999999983 3344433 388899999999999999999999876 2222
Q ss_pred ----HH-HHHHHHHHcCCHHHHHHHHHH
Q psy767 414 ----AA-NHIYHLINKGQIDAAYRIVNT 436 (902)
Q Consensus 414 ----~~-t~i~~l~~~g~~~~A~~~~~~ 436 (902)
.+ ++-.++...|+.+.+..+.+.
T Consensus 325 ~~~~~~~~l~~~~~~~g~~~~a~~~~~~ 352 (365)
T 4eqf_A 325 ISGNIWAALRIALSLMDQPELFQAANLG 352 (365)
T ss_dssp --CHHHHHHHHHHHHHTCHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHcCcHHHHHHHHHh
Confidence 11 234456688999988887754
No 29
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.42 E-value=1.6e-11 Score=132.68 Aligned_cols=272 Identities=10% Similarity=-0.025 Sum_probs=162.6
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV 161 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~ 161 (902)
+...|..+...+...|++++|..+|+++.+... .+..++..+ ...+.+.|++++|...|+.+.+.. +.+..+
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l------~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~ 91 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAP-EREEAWRSL------GLTQAENEKDGLAIIALNHARMLD-PKDIAV 91 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CCHHHHHHH------HHHHHHcCCHHHHHHHHHHHHhcC-cCCHHH
Confidence 344567788888999999999999999887542 366777777 889999999999999999988764 557788
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHH-HHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHH-HH-H
Q psy767 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ-TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NL-L 238 (902)
Q Consensus 162 yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~-ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~-~~-~ 238 (902)
|..+...|...|++++|++.|+++.... |+.. .+..+...+. .......+ .. +
T Consensus 92 ~~~la~~~~~~~~~~~A~~~~~~~~~~~--~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~ 147 (327)
T 3cv0_A 92 HAALAVSHTNEHNANAALASLRAWLLSQ--PQYEQLGSVNLQADV----------------------DIDDLNVQSEDFF 147 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTS--TTTTTC------------------------------------------CC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC--CccHHHHHHHhHHHH----------------------HHHHHHHHHHhHH
Confidence 9999999999999999999999998763 3322 2222211000 00000000 00 1
Q ss_pred HHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHH
Q psy767 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318 (902)
Q Consensus 239 ~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~ 318 (902)
+...|++++|...++++.+.. +.+..++..+...|...|++++|.+.|++....
T Consensus 148 ~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------------------------- 201 (327)
T 3cv0_A 148 FAAPNEYRECRTLLHAALEMN-PNDAQLHASLGVLYNLSNNYDSAAANLRRAVEL------------------------- 201 (327)
T ss_dssp TTSHHHHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------------------------
T ss_pred HHHcccHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-------------------------
Confidence 223445555555555555443 335556666666666666666666666652110
Q ss_pred HHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCc-ccHHHHHHHHHHcCChHH
Q psy767 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVN-GDYLDIIHALAVSGHGEY 396 (902)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~-~~~~~li~~~~~~g~~~~ 396 (902)
.+.+..+|..+...|...|++++|...|++. ...|.. ..|..+...+...|++++
T Consensus 202 -----------------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~ 258 (327)
T 3cv0_A 202 -----------------------RPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDL 258 (327)
T ss_dssp -----------------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred -----------------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHH
Confidence 0123455566666666666666666666652 222222 225556666666666666
Q ss_pred HHHHHHHcccCCCCCCC------------HHH----HHHHHHHcCCHHHHHHHHHHH
Q psy767 397 IDEIISKIQPGVGYSAD------------AAN----HIYHLINKGQIDAAYRIVNTL 437 (902)
Q Consensus 397 A~~l~~~m~~~~g~~pd------------~~t----~i~~l~~~g~~~~A~~~~~~m 437 (902)
|.+.|++... ..|+ ... +...+...|+.++|..+++..
T Consensus 259 A~~~~~~a~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 312 (327)
T 3cv0_A 259 AAKQLVRAIY---MQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVELTYAQN 312 (327)
T ss_dssp HHHHHHHHHH---HHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCC
T ss_pred HHHHHHHHHH---hCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 6666666554 2233 111 233445666666666666543
No 30
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.39 E-value=2.9e-09 Score=129.82 Aligned_cols=318 Identities=11% Similarity=0.085 Sum_probs=221.5
Q ss_pred HHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHH
Q psy767 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165 (902)
Q Consensus 86 yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~L 165 (902)
..-+...+...|.+++|..+|++.. . .....+.+ +. ..|++++|.++.++.. +..+|..+
T Consensus 1052 ~~eIA~Iai~lglyEEAf~IYkKa~----~-~~~A~~VL------ie---~i~nldrAiE~Aervn------~p~vWsqL 1111 (1630)
T 1xi4_A 1052 APDIANIAISNELFEEAFAIFRKFD----V-NTSAVQVL------IE---HIGNLDRAYEFAERCN------EPAVWSQL 1111 (1630)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHcC----C-HHHHHHHH------HH---HHhhHHHHHHHHHhcC------CHHHHHHH
Confidence 4457778888999999999999852 1 11112222 22 7788999999988663 24789999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCH
Q psy767 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM 245 (902)
Q Consensus 166 i~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 245 (902)
-.++...|++++|++.|... -|...|..++.+|.+.|++++|.+.+....+....+...+ -+...|++.+++
T Consensus 1112 AKAql~~G~~kEAIdsYiKA------dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt--~LafaYAKl~rl 1183 (1630)
T 1xi4_A 1112 AKAQLQKGMVKEAIDSYIKA------DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVET--ELIFALAKTNRL 1183 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHhc------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccH--HHHHHHHhhcCH
Confidence 99999999999999999653 3788889999999999999999999988776553322222 367777778888
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHh
Q psy767 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325 (902)
Q Consensus 246 ~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~ 325 (902)
++...+. . .++...|..+-..|...|++++|..+|... ++|..+...+..+++.+ .+.+..
T Consensus 1184 eele~fI----~---~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA------~ny~rLA~tLvkLge~q---~AIEaa--- 1244 (1630)
T 1xi4_A 1184 AELEEFI----N---GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV------SNFGRLASTLVHLGEYQ---AAVDGA--- 1244 (1630)
T ss_pred HHHHHHH----h---CCCHHHHHHHHHHHHhcCCHHHHHHHHHhh------hHHHHHHHHHHHhCCHH---HHHHHH---
Confidence 8654443 1 567778888889999999999999999984 47888888888886633 332211
Q ss_pred hhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCChHHHHHHHHHcc
Q psy767 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405 (902)
Q Consensus 326 ~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m~~~~~~~~~~~li~~~~~~g~~~~A~~l~~~m~ 405 (902)
.+ .-+..+|..+-.+|...|++..|....-.+.. ....+..++.-|.+.|.+++|+.+++.-.
T Consensus 1245 ------------rK---A~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv--~~deLeeli~yYe~~G~feEAI~LlE~aL 1307 (1630)
T 1xi4_A 1245 ------------RK---ANSTRTWKEVCFACVDGKEFRLAQMCGLHIVV--HADELEELINYYQDRGYFEELITMLEAAL 1307 (1630)
T ss_pred ------------HH---hCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhc--CHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 11 25678999999999999999999887664322 22236789999999999999999998876
Q ss_pred cCCCCCCCHH---HHHHHHH---HcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccc-hHHHHHH
Q psy767 406 PGVGYSADAA---NHIYHLI---NKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSAD-AANHIYH 478 (902)
Q Consensus 406 ~~~g~~pd~~---t~i~~l~---~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~li~~ 478 (902)
. +.|.+. |-+..+. +-++..++.++|. ++..+++... ...+ +. .-.++..
T Consensus 1308 ~---LeraH~gmftELaiLyaKy~peklmEhlk~f~---~rini~k~~r-~~e~----------------~~lW~elv~L 1364 (1630)
T 1xi4_A 1308 G---LERAHMGMFTELAILYSKFKPQKMREHLELFW---SRVNIPKVLR-AAEQ----------------AHLWAELVFL 1364 (1630)
T ss_pred c---cChhHhHHHHHHHHHHHhCCHHHHHHHHHHHH---HhcccchHhH-HHHH----------------HHHHHHHHHH
Confidence 5 555443 3233333 3444555555544 4333333110 0000 01 2236677
Q ss_pred HHhcCChHHHHH
Q psy767 479 LINKGQIDAAYR 490 (902)
Q Consensus 479 ~~k~g~~~~A~~ 490 (902)
|.+.|.++.|..
T Consensus 1365 Y~~~~e~dnA~~ 1376 (1630)
T 1xi4_A 1365 YDKYEEYDNAII 1376 (1630)
T ss_pred HHhcccHHHHHH
Confidence 899999999873
No 31
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.38 E-value=1.1e-08 Score=124.66 Aligned_cols=374 Identities=10% Similarity=0.047 Sum_probs=257.0
Q ss_pred HHHHHHHHHCCCchHHHHHHHHHHHCC--CCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHH
Q psy767 87 NALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164 (902)
Q Consensus 87 n~li~~~~~~g~~~~A~~l~~~M~~~g--~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~ 164 (902)
...+++|+..|.+.+|++++++....+ +.-+...-+.+ +.+..+. +..+..+..+...... ..-
T Consensus 989 s~~vKaf~~aglp~EaieLLEKivl~~s~fs~n~~LqnlL------i~tAIka-D~~Rv~eyI~kLd~~d-------~~e 1054 (1630)
T 1xi4_A 989 SVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLL------ILTAIKA-DRTRVMEYINRLDNYD-------APD 1054 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHcCCCcccccHHHHHHH------HHHHHHh-ChhhHHHHHHHhhhcc-------HHH
Confidence 477889999999999999999988432 11233444445 6666665 5566666666655222 334
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCC
Q psy767 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244 (902)
Q Consensus 165 Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 244 (902)
+-..+...|.+++|..+|++.. . .....+.++. ..+++++|.++.+++.. +..+.-+...+...|+
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~----~-~~~A~~VLie---~i~nldrAiE~Aervn~------p~vWsqLAKAql~~G~ 1120 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFD----V-NTSAVQVLIE---HIGNLDRAYEFAERCNE------PAVWSQLAKAQLQKGM 1120 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcC----C-HHHHHHHHHH---HHhhHHHHHHHHHhcCC------HHHHHHHHHHHHhCCC
Confidence 6677888999999999999852 1 2222233332 77889999998886632 5677788888888999
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCC-HHHHHHHHHHcCCcccHHHHHHHHH
Q psy767 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD-YLDIIHALAVSGHGEYIDEVSAIVC 323 (902)
Q Consensus 245 ~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~-~~tl~~~l~~~~~~~~~~~~~~l~~ 323 (902)
+++|...|... -|...|..++.+|.+.|++++|.+.|....+..-.|. ...+..+++..++ .+....+
T Consensus 1121 ~kEAIdsYiKA------dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~r---leele~f-- 1189 (1630)
T 1xi4_A 1121 VKEAIDSYIKA------DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNR---LAELEEF-- 1189 (1630)
T ss_pred HHHHHHHHHhc------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcC---HHHHHHH--
Confidence 99999998553 5778888899999999999999999986554432221 2234444454433 3332221
Q ss_pred HhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCChHHHHHHHHH
Q psy767 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISK 403 (902)
Q Consensus 324 ~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m~~~~~~~~~~~li~~~~~~g~~~~A~~l~~~ 403 (902)
. -.++...|..+...|...|++++|..+|... ..|..+...|.+.|+++.|.+.+++
T Consensus 1190 --------------I---~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA------~ny~rLA~tLvkLge~q~AIEaarK 1246 (1630)
T 1xi4_A 1190 --------------I---NGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV------SNFGRLASTLVHLGEYQAAVDGARK 1246 (1630)
T ss_pred --------------H---hCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh------hHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 1 1456777888999999999999999999974 4899999999999999999999998
Q ss_pred cccCCCCCCCHHH-HHHHHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHhc
Q psy767 404 IQPGVGYSADAAN-HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINK 482 (902)
Q Consensus 404 m~~~~g~~pd~~t-~i~~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k~ 482 (902)
... ++.+. +-.+|...|.+..|....-.+... |. ....++..|.+.
T Consensus 1247 A~n-----~~aWkev~~acve~~Ef~LA~~cgl~Iiv~----~d------------------------eLeeli~yYe~~ 1293 (1630)
T 1xi4_A 1247 ANS-----TRTWKEVCFACVDGKEFRLAQMCGLHIVVH----AD------------------------ELEELINYYQDR 1293 (1630)
T ss_pred hCC-----HHHHHHHHHHHhhhhHHHHHHHHHHhhhcC----HH------------------------HHHHHHHHHHHc
Confidence 844 34433 455667888888888766543211 11 233577779999
Q ss_pred CChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCCC-------ChhhHHHHHHHhccc
Q psy767 483 GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHP-------RAFNLAVLIKAHVLK 555 (902)
Q Consensus 483 g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~g~~P-------d~~t~~~ll~a~~~~ 555 (902)
|.+++|..+++...... +.....|+-+...+++.+ +++.++-++-..+++-.| +...|.-+.--+ +
T Consensus 1294 G~feEAI~LlE~aL~Le---raH~gmftELaiLyaKy~--peklmEhlk~f~~rini~k~~r~~e~~~lW~elv~LY-~- 1366 (1630)
T 1xi4_A 1294 GYFEELITMLEAALGLE---RAHMGMFTELAILYSKFK--PQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLY-D- 1366 (1630)
T ss_pred CCHHHHHHHHHHHhccC---hhHhHHHHHHHHHHHhCC--HHHHHHHHHHHHHhcccchHhHHHHHHHHHHHHHHHH-H-
Confidence 99999999998776553 234557777777777754 466655555544444333 345555555334 4
Q ss_pred ccccCcchh
Q psy767 556 EDYTGAVET 564 (902)
Q Consensus 556 ~~~~g~~~~ 564 (902)
+.|+++.
T Consensus 1367 --~~~e~dn 1373 (1630)
T 1xi4_A 1367 --KYEEYDN 1373 (1630)
T ss_pred --hcccHHH
Confidence 6677776
No 32
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.35 E-value=4.1e-11 Score=127.98 Aligned_cols=246 Identities=11% Similarity=0.006 Sum_probs=193.6
Q ss_pred hhcHHHHHHHhccccchhHHHH-HHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCch
Q psy767 22 SEATAEVTTVLGALGAFLVLLV-LLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTF 100 (902)
Q Consensus 22 s~~~~~a~~~~~~~~~~~~~~~-~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~ 100 (902)
.|.|..|...........+.+. -...++...|...|+++.|...+... -+|+..++..+...+...++.+
T Consensus 12 ~g~y~~ai~~~~~~~~~~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~~---------~~~~~~a~~~la~~~~~~~~~~ 82 (291)
T 3mkr_A 12 IGSYQQCINEAQRVKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIKPS---------SAPELQAVRMFAEYLASHSRRD 82 (291)
T ss_dssp TTCHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCHHHHHHHSCTT---------SCHHHHHHHHHHHHHHCSTTHH
T ss_pred HHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHCCCHHHHHHHhccc---------CChhHHHHHHHHHHHcCCCcHH
Confidence 5888888888765444444442 24456678999999999888776553 2467888999999999999999
Q ss_pred HHHHHHHHHHHCCCCCC-HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHH
Q psy767 101 SPTDFLAKLESQGIEPN-RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAE 179 (902)
Q Consensus 101 ~A~~l~~~M~~~g~~pd-~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~ 179 (902)
+|++.++++...+..|+ ...+..+ ..++...|++++|.+.++. +.+...+..+...|.+.|++++|.
T Consensus 83 ~A~~~l~~ll~~~~~P~~~~~~~~l------a~~~~~~g~~~~Al~~l~~------~~~~~~~~~l~~~~~~~g~~~~A~ 150 (291)
T 3mkr_A 83 AIVAELDREMSRSVDVTNTTFLLMA------ASIYFYDQNPDAALRTLHQ------GDSLECMAMTVQILLKLDRLDLAR 150 (291)
T ss_dssp HHHHHHHHHHHSCCCCSCHHHHHHH------HHHHHHTTCHHHHHHHHTT------CCSHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhcccCCCCHHHHHHH------HHHHHHCCCHHHHHHHHhC------CCCHHHHHHHHHHHHHCCCHHHHH
Confidence 99999999998776665 4445555 7889999999999999987 567889999999999999999999
Q ss_pred HHHHHHHHCCCCCCHHHH---HHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy767 180 GILTMMSQAGLEPSAQTY---TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256 (902)
Q Consensus 180 ~l~~~M~~~g~~pd~~ty---~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~ 256 (902)
+.|+.+.+.. |+.... ...+..+...|++++|..+|+++.... +.+...+..+..++...|++++|...|++..
T Consensus 151 ~~l~~~~~~~--p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~-p~~~~~~~~la~~~~~~g~~~eA~~~l~~al 227 (291)
T 3mkr_A 151 KELKKMQDQD--EDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKC-SPTLLLLNGQAACHMAQGRWEAAEGVLQEAL 227 (291)
T ss_dssp HHHHHHHHHC--TTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhC--cCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 9999999874 654321 123344445589999999999998763 3456677778888889999999999999988
Q ss_pred HCCCCCCHHHHHHHHHHHHHcCCHHH-HHHHHHHhcc
Q psy767 257 QAGLEPSAQTYTKLMCGYAKHGDMDS-VRRLLAQSGS 292 (902)
Q Consensus 257 ~~g~~pd~~ty~~LI~a~~~~g~~~~-A~~lf~~m~~ 292 (902)
... +-+..+|..++..+...|+.++ +.++++++..
T Consensus 228 ~~~-p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~ 263 (291)
T 3mkr_A 228 DKD-SGHPETLINLVVLSQHLGKPPEVTNRYLSQLKD 263 (291)
T ss_dssp HHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HhC-CCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 764 5578889999999999999876 5678877543
No 33
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.35 E-value=1.9e-11 Score=132.06 Aligned_cols=228 Identities=11% Similarity=-0.001 Sum_probs=183.4
Q ss_pred HHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHH
Q psy767 46 FVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI 125 (902)
Q Consensus 46 ~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll 125 (902)
+......+...|++++|...|+.+... .+.+...|..+...|...|++++|...|+++.+.. +.+..++..+
T Consensus 24 ~~~~a~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l- 95 (327)
T 3cv0_A 24 PMEEGLSMLKLANLAEAALAFEAVCQA------APEREEAWRSLGLTQAENEKDGLAIIALNHARMLD-PKDIAVHAAL- 95 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH-
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-cCCHHHHHHH-
Confidence 344566677788999999998888761 23477889999999999999999999999998763 3367778888
Q ss_pred HhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHH--------------HH-HHHhCCCHHHHHHHHHHHHHCCC
Q psy767 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL--------------IY-GHSQANDMASAEGILTMMSQAGL 190 (902)
Q Consensus 126 ~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~L--------------i~-~~~~~g~~~~A~~l~~~M~~~g~ 190 (902)
...|...|++++|...|+.+.... +.+...+..+ .. .+...|++++|.++|+++.+..
T Consensus 96 -----a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~- 168 (327)
T 3cv0_A 96 -----AVSHTNEHNANAALASLRAWLLSQ-PQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMN- 168 (327)
T ss_dssp -----HHHHHHTTCHHHHHHHHHHHHHTS-TTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHS-
T ss_pred -----HHHHHHcCCHHHHHHHHHHHHHhC-CccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhC-
Confidence 999999999999999999988764 3333444443 22 3777899999999999998874
Q ss_pred CCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHH
Q psy767 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKL 270 (902)
Q Consensus 191 ~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~L 270 (902)
..+..++..+...|...|++++|...++.+..... .+...+..+..++...|++++|...+++..+.. +.+..+|..+
T Consensus 169 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l 246 (327)
T 3cv0_A 169 PNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRP-DDAQLWNKLGATLANGNRPQEALDAYNRALDIN-PGYVRVMYNM 246 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHH
Confidence 33678999999999999999999999998876543 234567777788888999999999999988764 4568899999
Q ss_pred HHHHHHcCCHHHHHHHHHHh
Q psy767 271 MCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 271 I~a~~~~g~~~~A~~lf~~m 290 (902)
...|.+.|++++|.+.|++.
T Consensus 247 ~~~~~~~g~~~~A~~~~~~a 266 (327)
T 3cv0_A 247 AVSYSNMSQYDLAAKQLVRA 266 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHH
Confidence 99999999999999999974
No 34
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.31 E-value=7.3e-10 Score=126.71 Aligned_cols=389 Identities=11% Similarity=-0.004 Sum_probs=225.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHC-----C--CCC-CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHh
Q psy767 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ-----G--IEP-NRVTYQQLISNSKLISKYCQDGNIEGATKILEFM 150 (902)
Q Consensus 79 ~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~-----g--~~p-d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m 150 (902)
.......||.+-..+...|++++|++.|++..+. + ..| ...+|+.+ ..+|...|++++|...++..
T Consensus 47 ~~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nl------a~~y~~~g~~~~A~~~~~ka 120 (472)
T 4g1t_A 47 REFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNY------AWVYYHMGRLSDVQIYVDKV 120 (472)
T ss_dssp ---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHH------HHHHHHTTCHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHH------HHHHHHcCChHHHHHHHHHH
Confidence 3345678999999999999999999999886541 1 123 45778888 99999999999999999876
Q ss_pred hhC-----C-C-CCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHH---HHHcCChhHHHHHH
Q psy767 151 RDK-----T-F-PISEGVFNALIYGHSQA--NDMASAEGILTMMSQAGLEPS-AQTYTKLMCG---YAKHGDMDSIKTKI 217 (902)
Q Consensus 151 ~~~-----~-~-~p~~~~yn~Li~~~~~~--g~~~~A~~l~~~M~~~g~~pd-~~ty~~ll~a---~~~~g~~~~a~~l~ 217 (902)
.+. + . .....+|+.+-.++.+. +++++|+..|++..+. .|+ ...+..+..+ +...++.++|.+.+
T Consensus 121 ~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~--~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~ 198 (472)
T 4g1t_A 121 KHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEK--KPKNPEFTSGLAIASYRLDNWPPSQNAIDPL 198 (472)
T ss_dssp HHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHHHHSCCCCCTHHHH
T ss_pred HHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence 431 1 1 12345666665566554 5799999999999886 454 4444444444 45567778888888
Q ss_pred HhcccCCCccchhhHHHHHHHHH----hcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccC
Q psy767 218 PSLKPQSELFLCFSFQLTNLLIL----VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293 (902)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~ 293 (902)
+......+... ..+..+...+. ..++.++|..++++..... +.+..++..+...|.+.|++++|...|.+....
T Consensus 199 ~~al~l~p~~~-~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~-~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 276 (472)
T 4g1t_A 199 RQAIRLNPDNQ-YLKVLLALKLHKMREEGEEEGEGEKLVEEALEKA-PGVTDVLRSAAKFYRRKDEPDKAIELLKKALEY 276 (472)
T ss_dssp HHHHHHCSSCH-HHHHHHHHHHHHCC------CHHHHHHHHHHHHC-SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhhcCCcch-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Confidence 87765443322 22222222222 3578889999999887764 567888999999999999999999999986443
Q ss_pred CCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc-
Q psy767 294 LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN- 372 (902)
Q Consensus 294 ~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m- 372 (902)
. |+.......+..+- ...... .... ............+.++.|...|++.
T Consensus 277 ~--p~~~~~~~~lg~~y----~~~~~~----------------~~~~-------~~~~~~~~~~~~~~~~~A~~~~~~a~ 327 (472)
T 4g1t_A 277 I--PNNAYLHCQIGCCY----RAKVFQ----------------VMNL-------RENGMYGKRKLLELIGHAVAHLKKAD 327 (472)
T ss_dssp S--TTCHHHHHHHHHHH----HHHHHH----------------HHHC-------------CHHHHHHHHHHHHHHHHHHH
T ss_pred C--CChHHHHHHHHHHH----HHHHHH----------------hhhH-------HHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 2 21111111110000 000000 0000 0000001111223456777777762
Q ss_pred CCCC-CcccHHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHH-H---HH--HHHHcCCHHHHHHHHHHHHhccCCCC
Q psy767 373 GSSL-VNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAAN-H---IY--HLINKGQIDAAYRIVNTLARSANING 445 (902)
Q Consensus 373 ~~~~-~~~~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t-~---i~--~l~~~g~~~~A~~~~~~m~~~~~i~~ 445 (902)
...| ....+..+...+...|++++|.+.|++... ....|.... + +. .+...|+.++|...|++..+. .|
T Consensus 328 ~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i---~~ 403 (472)
T 4g1t_A 328 EANDNLFRVCSILASLHALADQYEEAEYYFQKEFS-KELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKI---NQ 403 (472)
T ss_dssp HHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHS---CC
T ss_pred hcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHh-cCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc---Cc
Confidence 2222 334488899999999999999999999887 222332221 1 11 123678999999999887663 22
Q ss_pred CcccchhhHHHhhhhcCCCCCccccchHHHHHHHHhcCChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHcCCCHHH
Q psy767 446 EQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDK 525 (902)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k~g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g~~~~~ 525 (902)
... .+.+....+.++++..... +|..+.+|+.+...+...|+ .++
T Consensus 404 ~~~-------------------------------~~~~~~~~l~~~~~~~l~~---~p~~~~~~~~LG~~~~~~g~-~~~ 448 (472)
T 4g1t_A 404 KSR-------------------------------EKEKMKDKLQKIAKMRLSK---NGADSEALHVLAFLQELNEK-MQQ 448 (472)
T ss_dssp CCH-------------------------------HHHHHHHHHHHHHHHHHHH---CC-CTTHHHHHHHHHHHHHH-CC-
T ss_pred ccH-------------------------------HHHHHHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCC-HHH
Confidence 210 0111223344555554443 23356789999999999999 999
Q ss_pred HHHHHHHHHHCC-CCCChhhH
Q psy767 526 VLAVCHRLTDEN-LHPRAFNL 545 (902)
Q Consensus 526 A~~l~~~m~~~g-~~Pd~~t~ 545 (902)
|++.|++..+.| ..|++.++
T Consensus 449 A~~~y~kALe~~~~~p~a~~~ 469 (472)
T 4g1t_A 449 ADEDSERGLESGSLIPSASSW 469 (472)
T ss_dssp ---------------------
T ss_pred HHHHHHHHHhcCCCCCcHhhc
Confidence 999999976643 56666654
No 35
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.28 E-value=1.3e-09 Score=127.04 Aligned_cols=390 Identities=10% Similarity=0.008 Sum_probs=259.4
Q ss_pred hhcHHHHHHHhccccchhHHHHHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHH-HHCCCch
Q psy767 22 SEATAEVTTVLGALGAFLVLLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVY-LDNEHTF 100 (902)
Q Consensus 22 s~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~-~~~g~~~ 100 (902)
.+.+..|..++.......+.+.-+|...+..+.+.|++++|+.+|+.... ..|++..|...+... ...|+++
T Consensus 25 ~~~~~~a~~~~e~al~~~P~~~~~w~~~~~~~~~~~~~~~a~~~~~ral~-------~~p~~~lw~~~~~~~~~~~~~~~ 97 (530)
T 2ooe_A 25 NQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLM-------KVLHIDLWKCYLSYVRETKGKLP 97 (530)
T ss_dssp SSCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT-------TCCCHHHHHHHHHHHHHHTTTST
T ss_pred hCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh-------cCCChHHHHHHHHHHHHHccchh
Confidence 57888888888887777777888888888888889999999999999987 447888888887643 4568887
Q ss_pred HHHH----HHHHHHH-CCCCC-CHHHHHHHHHhHHHHHHHHH---------cCCHHHHHHHHHHhhhCCCCCCHHHHHHH
Q psy767 101 SPTD----FLAKLES-QGIEP-NRVTYQQLISNSKLISKYCQ---------DGNIEGATKILEFMRDKTFPISEGVFNAL 165 (902)
Q Consensus 101 ~A~~----l~~~M~~-~g~~p-d~~t~~~ll~~~~li~~~~~---------~g~~~~A~~l~~~m~~~~~~p~~~~yn~L 165 (902)
+|.+ +|+.... .|..| +...|... +....+ .|+++.|..+|+........+....|...
T Consensus 98 ~a~~~~~~~~~~al~~~g~~~~~~~~w~~~------~~~~~~~~~~~~~~~~~~~~~a~~~y~~al~~P~~~~~~~~~~~ 171 (530)
T 2ooe_A 98 SYKEKMAQAYDFALDKIGMEIMSYQIWVDY------INFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDY 171 (530)
T ss_dssp THHHHHHHHHHHHHHHTTTSTTCHHHHHHH------HHHHHHSCCCSSTTHHHHHHHHHHHHHHHTTSCCTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCCcccHHHHHHH------HHHHhcCCCcccHHHHhHHHHHHHHHHHHHhchhhhHHHHHHHH
Confidence 7765 6666554 35544 45667666 665554 78999999999998873111112444433
Q ss_pred HHHH-------------HhCCCHHHHHHHHHHHH------HCC---CCCC--------HHHHHHHHHHHHHc----CCh-
Q psy767 166 IYGH-------------SQANDMASAEGILTMMS------QAG---LEPS--------AQTYTKLMCGYAKH----GDM- 210 (902)
Q Consensus 166 i~~~-------------~~~g~~~~A~~l~~~M~------~~g---~~pd--------~~ty~~ll~a~~~~----g~~- 210 (902)
.... .+.+++..|..++.++. +.. +.|+ ...|...+...... ++.
T Consensus 172 ~~~e~~~~~~~~~~~l~~~~~~~~~A~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~w~~~~~~e~~~~~~~~~~~ 251 (530)
T 2ooe_A 172 NKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQWEKSNPLRTEDQT 251 (530)
T ss_dssp HHHHHHHCHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCSSSCCCCCC--CCHHHHHHHHHHHHHHHHHCSSCCSCSH
T ss_pred HHHHHhhchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHcCCccCCcch
Confidence 2211 12456777877777632 111 2343 23455444333322 222
Q ss_pred ---hHHHHHHHhcccCCCccchhhHHHHHHHHHh-------cCCHH-------HHHHHHHHHHHCCCCCCHHHHHHHHHH
Q psy767 211 ---DSIKTKIPSLKPQSELFLCFSFQLTNLLILV-------SSDMA-------SAEGILTMMSQAGLEPSAQTYTKLMCG 273 (902)
Q Consensus 211 ---~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~-------~A~~l~~~m~~~g~~pd~~ty~~LI~a 273 (902)
..+..+|++.....+ .....+..+..++.. .|+++ +|..+|++..+.-.+.+...|..++..
T Consensus 252 ~~~~~a~~~y~~al~~~p-~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~ 330 (530)
T 2ooe_A 252 LITKRVMFAYEQCLLVLG-HHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADY 330 (530)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 256667777665422 234455555555553 68876 888999888863234568889999999
Q ss_pred HHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCC--HHHHHH
Q psy767 274 YAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS--AQTYTK 351 (902)
Q Consensus 274 ~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~--~~t~~~ 351 (902)
+.+.|++++|..+|++... +.|+ ..+|..
T Consensus 331 ~~~~g~~~~A~~~~~~al~-------------------------------------------------~~p~~~~~~~~~ 361 (530)
T 2ooe_A 331 EESRMKYEKVHSIYNRLLA-------------------------------------------------IEDIDPTLVYIQ 361 (530)
T ss_dssp HHHTTCHHHHHHHHHHHHH-------------------------------------------------SSSSCHHHHHHH
T ss_pred HHhcCCHHHHHHHHHHHhC-------------------------------------------------ccccCchHHHHH
Confidence 9999999999999987322 2343 257888
Q ss_pred HHHHHHHcCCHHHHHHHHHHc-CCCCCccc-HHHHHHH-HHHcCChHHHHHHHHHcccCCCCCCCHHHH----HHHHHHc
Q psy767 352 LMCGYAKHGDMDSIRRLLAQN-GSSLVNGD-YLDIIHA-LAVSGHGEYIDEIISKIQPGVGYSADAANH----IYHLINK 424 (902)
Q Consensus 352 Li~~y~~~g~~~~A~~~~~~m-~~~~~~~~-~~~li~~-~~~~g~~~~A~~l~~~m~~~~g~~pd~~t~----i~~l~~~ 424 (902)
++..+.+.|++++|..+|++- ...+.... |...+.. +...|+.++|..+|++..+ ..|+...+ +..+.+.
T Consensus 362 ~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~---~~p~~~~~~~~~~~~~~~~ 438 (530)
T 2ooe_A 362 YMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLK---KYGDIPEYVLAYIDYLSHL 438 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHH---HHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHH---HCCCCHHHHHHHHHHHHhC
Confidence 889999999999999999984 33332222 2222222 3368999999999999887 45665543 3344578
Q ss_pred CCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHH-HHHHHHhcCChHHHHHHHHHHHHc
Q psy767 425 GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAAN-HIYHLINKGQIDAAYRIVNTLARS 498 (902)
Q Consensus 425 g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-li~~~~k~g~~~~A~~l~~~m~~~ 498 (902)
|+.++|..+|++.......+|... ..++. .+....+.|+.+.+..++..+...
T Consensus 439 g~~~~Ar~~~~~al~~~~~~~~~~---------------------~~lw~~~~~~e~~~G~~~~~~~~~~r~~~~ 492 (530)
T 2ooe_A 439 NEDNNTRVLFERVLTSGSLPPEKS---------------------GEIWARFLAFESNIGDLASILKVEKRRFTA 492 (530)
T ss_dssp TCHHHHHHHHHHHHHSCCSCGGGC---------------------HHHHHHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCHhhHHHHHHHHHhccCCCHHHH---------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 999999999999987643333211 01232 344456789999999998887665
No 36
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.25 E-value=5.1e-10 Score=116.02 Aligned_cols=222 Identities=9% Similarity=0.005 Sum_probs=178.0
Q ss_pred HHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCC--CCC---
Q psy767 119 VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL--EPS--- 193 (902)
Q Consensus 119 ~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~--~pd--- 193 (902)
..|..+ ...+...|++++|...|+...+.+ .+...|..+..+|...|++++|+..|+...+... .|+
T Consensus 6 ~~~~~~------g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 77 (258)
T 3uq3_A 6 DKEKAE------GNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKV 77 (258)
T ss_dssp HHHHHH------HHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHH------HHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHH
Confidence 345556 888999999999999999998877 7789999999999999999999999999877521 122
Q ss_pred -HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q psy767 194 -AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272 (902)
Q Consensus 194 -~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~ 272 (902)
..+|..+...|...|++++|...|+........ ...+...|++++|...++.+.... +.+...|..+..
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~---------~~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~ 147 (258)
T 3uq3_A 78 ISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT---------ADILTKLRNAEKELKKAEAEAYVN-PEKAEEARLEGK 147 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC---------HHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCch---------hHHHHHHhHHHHHHHHHHHHHHcC-cchHHHHHHHHH
Confidence 578889999999999999999999988774433 234566788999999999988753 345667888889
Q ss_pred HHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHH
Q psy767 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352 (902)
Q Consensus 273 a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~L 352 (902)
.|...|++++|...|++... . .+.+..+|..+
T Consensus 148 ~~~~~~~~~~A~~~~~~a~~-----------------------------------------------~-~~~~~~~~~~l 179 (258)
T 3uq3_A 148 EYFTKSDWPNAVKAYTEMIK-----------------------------------------------R-APEDARGYSNR 179 (258)
T ss_dssp HHHHTTCHHHHHHHHHHHHH-----------------------------------------------H-CTTCHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHh-----------------------------------------------c-CcccHHHHHHH
Confidence 99999999999999987321 1 12256788888
Q ss_pred HHHHHHcCCHHHHHHHHHHc-CCCCCcc-cHHHHHHHHHHcCChHHHHHHHHHccc
Q psy767 353 MCGYAKHGDMDSIRRLLAQN-GSSLVNG-DYLDIIHALAVSGHGEYIDEIISKIQP 406 (902)
Q Consensus 353 i~~y~~~g~~~~A~~~~~~m-~~~~~~~-~~~~li~~~~~~g~~~~A~~l~~~m~~ 406 (902)
..+|...|++++|...|++. ...|..+ .|..+...+...|++++|.+.|++..+
T Consensus 180 ~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 235 (258)
T 3uq3_A 180 AAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAART 235 (258)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999873 3333333 377888889999999999999988876
No 37
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.22 E-value=4.8e-10 Score=113.97 Aligned_cols=199 Identities=11% Similarity=-0.034 Sum_probs=159.6
Q ss_pred CCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCH
Q psy767 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISE 159 (902)
Q Consensus 80 ~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~ 159 (902)
|++...|..+...+.+.|++++|...|++..+.. +.+...+..+ ...+.+.|++++|...|+...+.+ |.+.
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~l------g~~~~~~g~~~~A~~~~~~al~~~-P~~~ 73 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKEN-PQDPEALYWL------ARTQLKLGLVNPALENGKTLVART-PRYL 73 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS-SSCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-CCcH
Confidence 4677889999999999999999999999998653 2367778778 889999999999999999998875 5677
Q ss_pred HHHHHHHHHHHhC-----------CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccc
Q psy767 160 GVFNALIYGHSQA-----------NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228 (902)
Q Consensus 160 ~~yn~Li~~~~~~-----------g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~ 228 (902)
..|..+...|.+. |++++|+..|++..+... -+...|..+-.++...|++++|...|++..... .+
T Consensus 74 ~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~ 150 (217)
T 2pl2_A 74 GGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNP-RYAPLHLQRGLVYALLGERDKAEASLKQALALE--DT 150 (217)
T ss_dssp HHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CC
T ss_pred HHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc--cc
Confidence 8899999999999 999999999999988632 256788899999999999999999999998876 56
Q ss_pred hhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy767 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 229 ~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m 290 (902)
...+..+..++...|++++|...|+...+.. +.+...+..+...+.+.|++++|+..|++.
T Consensus 151 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-P~~~~~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 151 PEIRSALAELYLSMGRLDEALAQYAKALEQA-PKDLDLRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHTC--------------
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 6777788888889999999999999998864 557788999999999999999999999864
No 38
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.20 E-value=2.6e-09 Score=110.69 Aligned_cols=222 Identities=11% Similarity=-0.015 Sum_probs=185.2
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCC--CCCC--
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT--FPIS-- 158 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~--~~p~-- 158 (902)
...|..+...+...|++++|..+|++..+.. .+...|..+ ...|...|++++|...|+...+.. ..|+
T Consensus 5 a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~------~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 76 (258)
T 3uq3_A 5 ADKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNR------AAAEYEKGEYETAISTLNDAVEQGREMRADYK 76 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHH------HHHHHHcccHHHHHHHHHHHHHhCcccccchH
Confidence 4678889999999999999999999998877 678888888 999999999999999999986542 1122
Q ss_pred --HHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHH
Q psy767 159 --EGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236 (902)
Q Consensus 159 --~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 236 (902)
..+|..+...|...|++++|+..|++.... .|+. ..+...|++++|...++.+..... .....+..+.
T Consensus 77 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--~~~~-------~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~ 146 (258)
T 3uq3_A 77 VISKSFARIGNAYHKLGDLKKTIEYYQKSLTE--HRTA-------DILTKLRNAEKELKKAEAEAYVNP-EKAEEARLEG 146 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCCH-------HHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc--Cchh-------HHHHHHhHHHHHHHHHHHHHHcCc-chHHHHHHHH
Confidence 578999999999999999999999999886 4553 346667889999999998877532 3445666777
Q ss_pred HHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHH
Q psy767 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316 (902)
Q Consensus 237 ~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~ 316 (902)
.++...|++++|...+++..... +.+..+|..+...|.+.|++++|...|++...
T Consensus 147 ~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~------------------------ 201 (258)
T 3uq3_A 147 KEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNRAAALAKLMSFPEAIADCNKAIE------------------------ 201 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------------
T ss_pred HHHHHhcCHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHH------------------------
Confidence 77888999999999999998865 55788999999999999999999999997321
Q ss_pred HHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371 (902)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~ 371 (902)
. .+.+..+|..+..+|.+.|++++|...|++
T Consensus 202 -----------------------~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 232 (258)
T 3uq3_A 202 -----------------------K-DPNFVRAYIRKATAQIAVKEYASALETLDA 232 (258)
T ss_dssp -----------------------H-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -----------------------h-CHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 1 123577888999999999999999999987
No 39
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.17 E-value=4.7e-09 Score=108.69 Aligned_cols=201 Identities=13% Similarity=-0.040 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHH
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~y 162 (902)
...|..+...|...|++++|...|+++.+.. +.+...+..+ ...|...|++++|.+.|+.+.+.+ +.+...|
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l------a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~ 108 (252)
T 2ho1_A 37 RDAYIQLGLGYLQRGNTEQAKVPLRKALEID-PSSADAHAAL------AVVFQTEMEPKLADEEYRKALASD-SRNARVL 108 (252)
T ss_dssp HHHHHHHHHHHHHTTCTGGGHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHhcC-CChHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHHC-cCcHHHH
Confidence 4667788888888888888888888887653 2356667777 888888888888888888877654 4466788
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHh
Q psy767 163 NALIYGHSQANDMASAEGILTMMSQAGLEPS-AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241 (902)
Q Consensus 163 n~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd-~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (902)
..+...|...|++++|+++|+++...+..|+ ...+..+...+...|++++|...++........ ....+..+..++..
T Consensus 109 ~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~ 187 (252)
T 2ho1_A 109 NNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN-QPSVALEMADLLYK 187 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHH
Confidence 8888888888888888888888877434453 456777788888888888888888887664422 34556666777777
Q ss_pred cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccC
Q psy767 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293 (902)
Q Consensus 242 ~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~ 293 (902)
.|++++|...++.+.... +.+...+..+...|...|++++|.+.++++...
T Consensus 188 ~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~ 238 (252)
T 2ho1_A 188 EREYVPARQYYDLFAQGG-GQNARSLLLGIRLAKVFEDRDTAASYGLQLKRL 238 (252)
T ss_dssp TTCHHHHHHHHHHHHTTS-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhC-cCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 888888988888887654 566778888899999999999999999986543
No 40
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.16 E-value=4.8e-09 Score=106.08 Aligned_cols=164 Identities=11% Similarity=0.007 Sum_probs=115.7
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV 161 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~ 161 (902)
+...|..+...+...|++++|...|+++.+.. +.+...+..+ ...|...|++++|...|+...... +.+..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l------~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~ 78 (225)
T 2vq2_A 7 VSNIKTQLAMEYMRGQDYRQATASIEDALKSD-PKNELAWLVR------AEIYQYLKVNDKAQESFRQALSIK-PDSAEI 78 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC-ccchHHHHHH------HHHHHHcCChHHHHHHHHHHHHhC-CCChHH
Confidence 45667778888888888888888888877643 2246667667 777888888888888888876654 446677
Q ss_pred HHHHHHHHHhC-CCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHH
Q psy767 162 FNALIYGHSQA-NDMASAEGILTMMSQAGLEPS-AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI 239 (902)
Q Consensus 162 yn~Li~~~~~~-g~~~~A~~l~~~M~~~g~~pd-~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (902)
|..+...|... |++++|...|+++.+.+..|+ ...+..+...+...|++++|...++.+..
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~----------------- 141 (225)
T 2vq2_A 79 NNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLA----------------- 141 (225)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----------------
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----------------
Confidence 88888888888 888888888888877333343 45666677777777777766665555433
Q ss_pred HhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 240 LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 240 ~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~ 289 (902)
.. +.+...|..+...|.+.|++++|...|++
T Consensus 142 ------------------~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 172 (225)
T 2vq2_A 142 ------------------AQ-PQFPPAFKELARTKMLAGQLGDADYYFKK 172 (225)
T ss_dssp ------------------HS-TTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred ------------------hC-CCCchHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 21 33466677777777777777777777775
No 41
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.15 E-value=1.9e-08 Score=114.86 Aligned_cols=309 Identities=10% Similarity=-0.060 Sum_probs=168.7
Q ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC-----C--CCC-CHHHHHHHHHHHHHcCChhHHHHHHHhcccC-----
Q psy767 157 ISEGVFNALIYGHSQANDMASAEGILTMMSQA-----G--LEP-SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ----- 223 (902)
Q Consensus 157 p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~-----g--~~p-d~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~----- 223 (902)
.....||.|-..+...|+.++|++.|++..+. + ..| ...+|+.+..+|...|++++|...+++....
T Consensus 49 ~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~ 128 (472)
T 4g1t_A 49 FKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFS 128 (472)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcc
Confidence 34567888888888888888888888766431 1 122 3567888888888888888888777665431
Q ss_pred --CCccchhhHHHHHHHHHh--cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH---HHHcCCHHHHHHHHHHhccCCCC
Q psy767 224 --SELFLCFSFQLTNLLILV--SSDMASAEGILTMMSQAGLEPSAQTYTKLMCG---YAKHGDMDSVRRLLAQSGSSLVN 296 (902)
Q Consensus 224 --~~~~~~~~~~~~~~~~~~--~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a---~~~~g~~~~A~~lf~~m~~~~~~ 296 (902)
........+......+.. .+++++|...|++..+.. +-+...+..+..+ +...++.++|++.|++.....
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~-p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~-- 205 (472)
T 4g1t_A 129 SPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKK-PKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLN-- 205 (472)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHC--
T ss_pred cccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcC--
Confidence 011112222222222222 356778888887776653 2234444444433 334456666777666522110
Q ss_pred CCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHH-
Q psy767 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSIRRLLAQ- 371 (902)
Q Consensus 297 p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~----~g~~~~A~~~~~~- 371 (902)
+.+..++..+...+.. .|++++|..++++
T Consensus 206 ----------------------------------------------p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~a 239 (472)
T 4g1t_A 206 ----------------------------------------------PDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEA 239 (472)
T ss_dssp ----------------------------------------------SSCHHHHHHHHHHHHHCC------CHHHHHHHHH
T ss_pred ----------------------------------------------CcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 1133344444333333 3456667776665
Q ss_pred cCCCCCccc-HHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHHHHHH----HH-------------------HcCCH
Q psy767 372 NGSSLVNGD-YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH----LI-------------------NKGQI 427 (902)
Q Consensus 372 m~~~~~~~~-~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t~i~~----l~-------------------~~g~~ 427 (902)
....|..+. +..+...|...|++++|.+.+++..+ ..|+....... +. ..+..
T Consensus 240 l~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~---~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (472)
T 4g1t_A 240 LEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALE---YIPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELI 316 (472)
T ss_dssp HHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---HSTTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHH
T ss_pred HHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHH---hCCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhH
Confidence 222222222 56677777777777777777777766 55554332111 10 12234
Q ss_pred HHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHhcCChHHHHHHHHHHHHccCCCCCccc
Q psy767 428 DAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLP 507 (902)
Q Consensus 428 ~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k~g~~~~A~~l~~~m~~~~~~~~~~~~ 507 (902)
+.|...++.........+. ..+++...|...|++++|...|+........+.....
T Consensus 317 ~~A~~~~~~a~~~~~~~~~------------------------~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~ 372 (472)
T 4g1t_A 317 GHAVAHLKKADEANDNLFR------------------------VCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQL 372 (472)
T ss_dssp HHHHHHHHHHHHHCTTTCC------------------------CHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHHHhhcCCchhh------------------------hhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHH
Confidence 5666666665553221111 2345666688889999999999887765322211111
Q ss_pred hHHHHHHH-HHHcCCCHHHHHHHHHHHHHCCCCCChhh
Q psy767 508 VGGFLVRH-MVKTNQPIDKVLAVCHRLTDENLHPRAFN 544 (902)
Q Consensus 508 ~~n~li~~-~~~~g~~~~~A~~l~~~m~~~g~~Pd~~t 544 (902)
.+..+... ....|+ .++|+..|++..+ +.|+...
T Consensus 373 ~~~~~~~~~~~~~~~-~~~Ai~~y~kal~--i~~~~~~ 407 (472)
T 4g1t_A 373 LHLRYGNFQLYQMKC-EDKAIHHFIEGVK--INQKSRE 407 (472)
T ss_dssp HHHHHHHHHHHTSSC-HHHHHHHHHHHHH--SCCCCHH
T ss_pred HHHHHHHHHHHHCCC-HHHHHHHHHHHHh--cCcccHH
Confidence 22222222 234566 8899998888766 3555433
No 42
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.14 E-value=1e-09 Score=115.08 Aligned_cols=182 Identities=10% Similarity=-0.069 Sum_probs=128.7
Q ss_pred CCCchHHHHHHHHHHHCCCCC---CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhC
Q psy767 96 NEHTFSPTDFLAKLESQGIEP---NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172 (902)
Q Consensus 96 ~g~~~~A~~l~~~M~~~g~~p---d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~ 172 (902)
.|++++|+..|+++.+..... +..+|..+ ...|...|++++|...|+.....+ +.+..+|..+...|...
T Consensus 18 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~ 90 (275)
T 1xnf_A 18 TLQQEVILARMEQILASRALTDDERAQLLYER------GVLYDSLGLRALARNDFSQALAIR-PDMPEVFNYLGIYLTQA 90 (275)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHhcccccCchhHHHHHHH------HHHHHHcccHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHc
Confidence 477899999999998763211 34566666 888999999999999999988765 55788999999999999
Q ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHH
Q psy767 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252 (902)
Q Consensus 173 g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~ 252 (902)
|++++|++.|++..+.. ..+..+|..+...|...|++++|...++.+........ ........+...|++++|...+
T Consensus 91 ~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~A~~~~ 167 (275)
T 1xnf_A 91 GNFDAAYEAFDSVLELD-PTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDP--FRSLWLYLAEQKLDEKQAKEVL 167 (275)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHHCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcC-ccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHhcCHHHHHHHH
Confidence 99999999999998863 23567888889999999999999888888766432222 2222223334456666666666
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 253 ~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~ 289 (902)
....... +++...|. ++..+...++.++|+..+.+
T Consensus 168 ~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~a~~~~~~ 202 (275)
T 1xnf_A 168 KQHFEKS-DKEQWGWN-IVEFYLGNISEQTLMERLKA 202 (275)
T ss_dssp HHHHHHS-CCCSTHHH-HHHHHTTSSCHHHHHHHHHH
T ss_pred HHHHhcC-CcchHHHH-HHHHHHHhcCHHHHHHHHHH
Confidence 5555432 23333333 55555555666666666655
No 43
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.12 E-value=1.9e-09 Score=109.51 Aligned_cols=208 Identities=14% Similarity=0.021 Sum_probs=117.0
Q ss_pred CCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHH
Q psy767 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195 (902)
Q Consensus 116 pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ 195 (902)
++...+..+ ...+.+.|++++|...|+...+.+ |.+...|..+...+.+.|++++|+..|++..+.. +-+..
T Consensus 3 ~~~~~~~~l------g~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-P~~~~ 74 (217)
T 2pl2_A 3 TAEQNPLRL------GVQLYALGRYDAALTLFERALKEN-PQDPEALYWLARTQLKLGLVNPALENGKTLVART-PRYLG 74 (217)
T ss_dssp -CCHHHHHH------HHHHHHTTCHHHHHHHHHHHHTTS-SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHH
T ss_pred CcHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHH
Confidence 455566666 778888999999999999888765 6677888888899999999999999999888764 22456
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q psy767 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275 (902)
Q Consensus 196 ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~ 275 (902)
.+..+...+...+... . . .....|++++|...|++..+.. +-+...|..+-..|.
T Consensus 75 a~~~lg~~~~~~~~~~------------~---~---------~~~~~g~~~~A~~~~~~al~~~-P~~~~~~~~lg~~~~ 129 (217)
T 2pl2_A 75 GYMVLSEAYVALYRQA------------E---D---------RERGKGYLEQALSVLKDAERVN-PRYAPLHLQRGLVYA 129 (217)
T ss_dssp HHHHHHHHHHHHHHTC------------S---S---------HHHHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhh------------h---h---------hcccccCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHH
Confidence 7777777777761000 0 0 0011234444444444444332 234555666666666
Q ss_pred HcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHH
Q psy767 276 KHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355 (902)
Q Consensus 276 ~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~ 355 (902)
..|++++|+..|++ ..+.. .+...+..+..+
T Consensus 130 ~~g~~~~A~~~~~~-----------------------------------------------al~~~--~~~~~~~~la~~ 160 (217)
T 2pl2_A 130 LLGERDKAEASLKQ-----------------------------------------------ALALE--DTPEIRSALAEL 160 (217)
T ss_dssp HTTCHHHHHHHHHH-----------------------------------------------HHHHC--CCHHHHHHHHHH
T ss_pred HcCChHHHHHHHHH-----------------------------------------------HHhcc--cchHHHHHHHHH
Confidence 66666666666665 11222 345555556666
Q ss_pred HHHcCCHHHHHHHHHH-cCCCCCccc-HHHHHHHHHHcCChHHHHHHHHHcc
Q psy767 356 YAKHGDMDSIRRLLAQ-NGSSLVNGD-YLDIIHALAVSGHGEYIDEIISKIQ 405 (902)
Q Consensus 356 y~~~g~~~~A~~~~~~-m~~~~~~~~-~~~li~~~~~~g~~~~A~~l~~~m~ 405 (902)
|...|++++|...|++ +...|..+. +..+...+...|++++|.+.|++..
T Consensus 161 ~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 212 (217)
T 2pl2_A 161 YLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARAAALEH 212 (217)
T ss_dssp HHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC---------------
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHHHHHHHHHHHh
Confidence 6666666666666655 222233222 4455555566666666666655543
No 44
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.10 E-value=9.4e-09 Score=107.66 Aligned_cols=195 Identities=9% Similarity=-0.010 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCC--CHHHH
Q psy767 85 HYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPI--SEGVF 162 (902)
Q Consensus 85 ~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p--~~~~y 162 (902)
.+......+...|++++|...|++..+.... +...+..+ ...|...|++++|...|+...+..-.| ...+|
T Consensus 5 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~-~~~~~~~l------~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 77 (272)
T 3u4t_A 5 VEFRYADFLFKNNNYAEAIEVFNKLEAKKYN-SPYIYNRR------AVCYYELAKYDLAQKDIETYFSKVNATKAKSADF 77 (272)
T ss_dssp CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCC-CSTTHHHH------HHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHH------HHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHH
Confidence 3456677888999999999999999876422 44467777 889999999999999999988743112 13348
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhc
Q psy767 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242 (902)
Q Consensus 163 n~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (902)
..+...|...|++++|++.|+...+.. ..+..+|..+...|...|++++|...++........ +...+..+...+...
T Consensus 78 ~~lg~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~ 155 (272)
T 3u4t_A 78 EYYGKILMKKGQDSLAIQQYQAAVDRD-TTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTT-DPKVFYELGQAYYYN 155 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCC-CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCC-cHHHHHHHHHHHHHH
Confidence 999999999999999999999998864 235678999999999999999999999999887333 333444444233445
Q ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHH
Q psy767 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD---MDSVRRLLAQ 289 (902)
Q Consensus 243 g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~---~~~A~~lf~~ 289 (902)
+++++|...|+...+.. +.+...|..+...+...|+ +++|...|++
T Consensus 156 ~~~~~A~~~~~~a~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 204 (272)
T 3u4t_A 156 KEYVKADSSFVKVLELK-PNIYIGYLWRARANAAQDPDTKQGLAKPYYEK 204 (272)
T ss_dssp TCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHcCcchhhHHHHHHHHH
Confidence 69999999999988764 4457778888888888888 7778888876
No 45
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.10 E-value=2e-08 Score=103.82 Aligned_cols=163 Identities=15% Similarity=0.045 Sum_probs=104.3
Q ss_pred HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHH
Q psy767 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197 (902)
Q Consensus 118 ~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty 197 (902)
...|..+ ...+...|++++|...|+.+.... +.+...|..+...|...|++++|.+.|+++.+.. ..+...+
T Consensus 37 ~~~~~~~------a~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~ 108 (252)
T 2ho1_A 37 RDAYIQL------GLGYLQRGNTEQAKVPLRKALEID-PSSADAHAALAVVFQTEMEPKLADEEYRKALASD-SRNARVL 108 (252)
T ss_dssp HHHHHHH------HHHHHHTTCTGGGHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHH------HHHHHHcCChHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-cCcHHHH
Confidence 3455666 788888999999999999887764 5567888889999999999999999999988764 2366788
Q ss_pred HHHHHHHHHcCChhHHHHHHHhcccCCCcc-chhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q psy767 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELF-LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276 (902)
Q Consensus 198 ~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~ 276 (902)
..+...|...|++++|...++.+...+..+ ....+..+..++...|++++|...+++..... +.+...|..+...|..
T Consensus 109 ~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~ 187 (252)
T 2ho1_A 109 NNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLN-RNQPSVALEMADLLYK 187 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHH
Confidence 888888888888888888887776521111 22233333333444444444444444444332 2233444444444444
Q ss_pred cCCHHHHHHHHHH
Q psy767 277 HGDMDSVRRLLAQ 289 (902)
Q Consensus 277 ~g~~~~A~~lf~~ 289 (902)
.|++++|...|++
T Consensus 188 ~g~~~~A~~~~~~ 200 (252)
T 2ho1_A 188 EREYVPARQYYDL 200 (252)
T ss_dssp TTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 4444444444443
No 46
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.09 E-value=9e-08 Score=100.56 Aligned_cols=126 Identities=12% Similarity=-0.008 Sum_probs=94.7
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHH----cCCHHHHHHHHHHhhhCCCCC
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ----DGNIEGATKILEFMRDKTFPI 157 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~----~g~~~~A~~l~~~m~~~~~~p 157 (902)
+..++..+-..|...|++++|...|++..+.+ +...+..+ ...|.. .+++++|...|+...+.+
T Consensus 5 ~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~l------g~~~~~g~~~~~~~~~A~~~~~~a~~~~--- 72 (273)
T 1ouv_A 5 DPKELVGLGAKSYKEKDFTQAKKYFEKACDLK---ENSGCFNL------GVLYYQGQGVEKNLKKAASFYAKACDLN--- 72 (273)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT---CHHHHHHH------HHHHHHTSSSCCCHHHHHHHHHHHHHTT---
T ss_pred ChHHHHHHHHHHHhCCCHHHHHHHHHHHHHCC---CHHHHHHH------HHHHHcCCCcCCCHHHHHHHHHHHHHCC---
Confidence 55677777788888888888888888877732 45566666 777777 888888888888887776
Q ss_pred CHHHHHHHHHHHHh----CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH----cCChhHHHHHHHhccc
Q psy767 158 SEGVFNALIYGHSQ----ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSIKTKIPSLKP 222 (902)
Q Consensus 158 ~~~~yn~Li~~~~~----~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~----~g~~~~a~~l~~~~~~ 222 (902)
+...+..+-..|.. .+++++|+..|++..+.+ +...+..+-..|.. .+++++|...|+....
T Consensus 73 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~ 142 (273)
T 1ouv_A 73 YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACD 142 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHh
Confidence 56777788888888 888888888888887765 66677777777777 7777766666665544
No 47
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.07 E-value=5e-08 Score=102.52 Aligned_cols=222 Identities=10% Similarity=-0.038 Sum_probs=169.2
Q ss_pred CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHh----CCCHHHHHHHHHHHHHCCCCC
Q psy767 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ----ANDMASAEGILTMMSQAGLEP 192 (902)
Q Consensus 117 d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~----~g~~~~A~~l~~~M~~~g~~p 192 (902)
+..++..+ -..|...|++++|...|+...+.+ +...+..+...|.. .|++++|+..|++..+.+
T Consensus 5 ~~~a~~~l------g~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--- 72 (273)
T 1ouv_A 5 DPKELVGL------GAKSYKEKDFTQAKKYFEKACDLK---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--- 72 (273)
T ss_dssp CHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---
T ss_pred ChHHHHHH------HHHHHhCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---
Confidence 45556666 788889999999999999988844 45788888899999 999999999999999876
Q ss_pred CHHHHHHHHHHHHH----cCChhHHHHHHHhcccCCCccchhhHHHHHHHHHh----cCCHHHHHHHHHHHHHCCCCCCH
Q psy767 193 SAQTYTKLMCGYAK----HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV----SSDMASAEGILTMMSQAGLEPSA 264 (902)
Q Consensus 193 d~~ty~~ll~a~~~----~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~A~~l~~~m~~~g~~pd~ 264 (902)
+...+..+...|.. .+++++|...|+.....+ +...+..+..++.. .+++++|...|++..+.+ +.
T Consensus 73 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~ 146 (273)
T 1ouv_A 73 YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN---DG 146 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT---CH
T ss_pred CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC---cH
Confidence 77888888888998 999999999888887754 44556666666776 788888888888888765 56
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhc
Q psy767 265 QTYTKLMCGYAK----HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340 (902)
Q Consensus 265 ~ty~~LI~a~~~----~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~ 340 (902)
..+..+-..|.. .+++++|+..|++.. +.
T Consensus 147 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~-----------------------------------------------~~ 179 (273)
T 1ouv_A 147 DGCTILGSLYDAGRGTPKDLKKALASYDKAC-----------------------------------------------DL 179 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH-----------------------------------------------HT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH-----------------------------------------------HC
Confidence 677777777777 788888888887621 11
Q ss_pred CCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHcCCCCCcccHHHHHHHHHH----cCChHHHHHHHHHccc
Q psy767 341 GLEPSAQTYTKLMCGYAK----HGDMDSIRRLLAQNGSSLVNGDYLDIIHALAV----SGHGEYIDEIISKIQP 406 (902)
Q Consensus 341 g~~p~~~t~~~Li~~y~~----~g~~~~A~~~~~~m~~~~~~~~~~~li~~~~~----~g~~~~A~~l~~~m~~ 406 (902)
+ +...+..+...|.. .+++++|...|++.........+..+...|.. .+++++|.+.|++..+
T Consensus 180 ~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~ 250 (273)
T 1ouv_A 180 K---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCK 250 (273)
T ss_dssp T---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHH
Confidence 1 34566667777777 78888888888774333334446667777776 7778888888877766
No 48
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.06 E-value=6.1e-09 Score=106.88 Aligned_cols=200 Identities=10% Similarity=0.017 Sum_probs=118.8
Q ss_pred HHHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHH
Q psy767 42 LVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121 (902)
Q Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~ 121 (902)
....+..+...+...|++++|...|+.... ..+.+...|..+...|...|++++|...|++..+.. +.+..++
T Consensus 22 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~ 94 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYEKAAEAFTKAIE------ENKEDAIPYINFANLLSSVNELERALAFYDKALELD-SSAATAY 94 (243)
T ss_dssp --------------------CCTTHHHHHT------TCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHH------hCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CcchHHH
Confidence 344455556666677777777777777665 223356667777777777777777777777766543 2245556
Q ss_pred HHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q psy767 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201 (902)
Q Consensus 122 ~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll 201 (902)
..+ ...|...|++++|...|+.+.+.. +.+...|..+...+.+.|++++|...|+++.+.. ..+...+..+.
T Consensus 95 ~~l------a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~ 166 (243)
T 2q7f_A 95 YGA------GNVYVVKEMYKEAKDMFEKALRAG-MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELN-ENDTEARFQFG 166 (243)
T ss_dssp HHH------HHHHHHTTCHHHHHHHHHHHHHHT-CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred HHH------HHHHHHhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CccHHHHHHHH
Confidence 666 667777777777777777766554 4456667777777777777777777777766553 22455666666
Q ss_pred HHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHH
Q psy767 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281 (902)
Q Consensus 202 ~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~ 281 (902)
..+...|++++|...++.+ .... +.+..+|..+...|...|+++
T Consensus 167 ~~~~~~~~~~~A~~~~~~~-----------------------------------~~~~-~~~~~~~~~la~~~~~~~~~~ 210 (243)
T 2q7f_A 167 MCLANEGMLDEALSQFAAV-----------------------------------TEQD-PGHADAFYNAGVTYAYKENRE 210 (243)
T ss_dssp HHHHHHTCCHHHHHHHHHH-----------------------------------HHHC-TTCHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHcCCHHHHHHHHHHH-----------------------------------HHhC-cccHHHHHHHHHHHHHccCHH
Confidence 6666666666655555544 3322 345677888888888888888
Q ss_pred HHHHHHHHhcc
Q psy767 282 SVRRLLAQSGS 292 (902)
Q Consensus 282 ~A~~lf~~m~~ 292 (902)
+|.+.|++...
T Consensus 211 ~A~~~~~~~~~ 221 (243)
T 2q7f_A 211 KALEMLDKAID 221 (243)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 88888887644
No 49
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.05 E-value=4.5e-09 Score=110.19 Aligned_cols=244 Identities=9% Similarity=0.000 Sum_probs=178.5
Q ss_pred HHcCCHHHHHHHHHHhhhCCC---CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChh
Q psy767 135 CQDGNIEGATKILEFMRDKTF---PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211 (902)
Q Consensus 135 ~~~g~~~~A~~l~~~m~~~~~---~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~ 211 (902)
...|++++|...|+.+.+... +.+..+|..+...|...|++++|+..|++..+.. ..+..+|..+...|...|+++
T Consensus 16 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~ 94 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIR-PDMPEVFNYLGIYLTQAGNFD 94 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHH
T ss_pred CccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHccCHH
Confidence 356889999999999987632 1246788999999999999999999999998874 336789999999999999999
Q ss_pred HHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhc
Q psy767 212 SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291 (902)
Q Consensus 212 ~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~ 291 (902)
+|...|+......+. ....+..+..++...|++++|...|+.+.+. .|+...+...+..+...|++++|...|.+..
T Consensus 95 ~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~ 171 (275)
T 1xnf_A 95 AAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQD--DPNDPFRSLWLYLAEQKLDEKQAKEVLKQHF 171 (275)
T ss_dssp HHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHh--CCCChHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999998775432 3456677777788899999999999998875 4555555556666677799999999997632
Q ss_pred cCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 292 SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371 (902)
Q Consensus 292 ~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~ 371 (902)
.. . +++...+ .++..+...++.++|...+.+
T Consensus 172 ~~----------------------------------------------~--~~~~~~~-~~~~~~~~~~~~~~a~~~~~~ 202 (275)
T 1xnf_A 172 EK----------------------------------------------S--DKEQWGW-NIVEFYLGNISEQTLMERLKA 202 (275)
T ss_dssp HH----------------------------------------------S--CCCSTHH-HHHHHHTTSSCHHHHHHHHHH
T ss_pred hc----------------------------------------------C--CcchHHH-HHHHHHHHhcCHHHHHHHHHH
Confidence 21 1 1222223 356667777778888888877
Q ss_pred cCCCCC------cccHHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHH-HHHHHHHHcCCHHHHHHHH
Q psy767 372 NGSSLV------NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA-NHIYHLINKGQIDAAYRIV 434 (902)
Q Consensus 372 m~~~~~------~~~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~-t~i~~l~~~g~~~~A~~~~ 434 (902)
.-.... ...|..+...|...|++++|.+.|++... ..|+.. .....+...|++++|.+.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~---~~p~~~~~~~~~~~~l~~~~~a~~~~ 269 (275)
T 1xnf_A 203 DATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVA---NNVHNFVEHRYALLELSLLGQDQDDL 269 (275)
T ss_dssp HCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT---TCCTTCHHHHHHHHHHHHHHHC----
T ss_pred HhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHh---CCchhHHHHHHHHHHHHHHHhhHHHH
Confidence 433222 12367788888888999999999988877 556443 3455666778888777665
No 50
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.05 E-value=2e-08 Score=111.00 Aligned_cols=247 Identities=9% Similarity=-0.030 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCC-HHHHHHHHHHhhhCCCCCCHHH
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN-IEGATKILEFMRDKTFPISEGV 161 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~-~~~A~~l~~~m~~~~~~p~~~~ 161 (902)
...|+.+...+...|++++|+..|++..+.... +...|+.+ ..++...|+ +++|+..|+.....+ +-+...
T Consensus 97 ~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~------g~~l~~~g~d~~eAl~~~~~al~l~-P~~~~a 168 (382)
T 2h6f_A 97 RDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFR------RVLLKSLQKDLHEEMNYITAIIEEQ-PKNYQV 168 (382)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHH------HHHHHHTTCCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHH------HHHHHHcccCHHHHHHHHHHHHHHC-CCCHHH
Confidence 456888889999999999999999999875422 56778888 888999997 999999999998876 557889
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHh
Q psy767 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241 (902)
Q Consensus 162 yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (902)
|+.+-.++.+.|++++|+..|+.+.+... -+...|..+..++...|++++|+..++.+...... +...+..+..++..
T Consensus 169 ~~~~g~~~~~~g~~~eAl~~~~kal~ldP-~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~-~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 169 WHHRRVLVEWLRDPSQELEFIADILNQDA-KNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVR-NNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCc-cCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH
Confidence 99999999999999999999999998752 36789999999999999999999999998876544 33445555555555
Q ss_pred -cCCHHHH-----HHHHHHHHHCCCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcc
Q psy767 242 -SSDMASA-----EGILTMMSQAGLEPSAQTYTKLMCGYAKHG--DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313 (902)
Q Consensus 242 -~g~~~~A-----~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g--~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~ 313 (902)
.|..++| ...|+...... +-+...|+.+...|...| ++++|++.+.++
T Consensus 247 l~~~~~eA~~~~el~~~~~Al~l~-P~~~~a~~~l~~ll~~~g~~~~~~a~~~~~~~----------------------- 302 (382)
T 2h6f_A 247 TTGYNDRAVLEREVQYTLEMIKLV-PHNESAWNYLKGILQDRGLSKYPNLLNQLLDL----------------------- 302 (382)
T ss_dssp TTCSCSHHHHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHTTTCGGGCHHHHHHHHHH-----------------------
T ss_pred hcCcchHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHccCccchHHHHHHHHHh-----------------------
Confidence 5654666 47777776653 445678888888888877 578888777653
Q ss_pred cHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcC---------CHHHHHHHHHHc--CCCCCccc-H
Q psy767 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG---------DMDSIRRLLAQN--GSSLVNGD-Y 381 (902)
Q Consensus 314 ~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g---------~~~~A~~~~~~m--~~~~~~~~-~ 381 (902)
.....+...+..+...|.+.| .+++|..+|++. ...|.... |
T Consensus 303 --------------------------~~~p~~~~al~~La~~~~~~~~~~~~~~~~~~~~A~~~~~~l~~~~DP~r~~~w 356 (382)
T 2h6f_A 303 --------------------------QPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYW 356 (382)
T ss_dssp --------------------------TTTCCCHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHTTCGGGHHHH
T ss_pred --------------------------ccCCCCHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHhCchhHHHH
Confidence 112335677888888888864 258899999886 55555544 6
Q ss_pred HHHHHHHH
Q psy767 382 LDIIHALA 389 (902)
Q Consensus 382 ~~li~~~~ 389 (902)
..+...+.
T Consensus 357 ~~~~~~l~ 364 (382)
T 2h6f_A 357 RYIGRSLQ 364 (382)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 65555544
No 51
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.00 E-value=1.3e-08 Score=104.41 Aligned_cols=163 Identities=9% Similarity=0.003 Sum_probs=96.1
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV 161 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~ 161 (902)
+...|..+...+...|++++|..+|+++.+.. +.+..++..+ ...|...|++++|...|+...... +.+...
T Consensus 22 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-~~~~~~~~~l------a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~ 93 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYEKAAEAFTKAIEEN-KEDAIPYINF------ANLLSSVNELERALAFYDKALELD-SSAATA 93 (243)
T ss_dssp --------------------CCTTHHHHHTTC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhC-cccHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHcC-CcchHH
Confidence 44556777777777888888888888877543 2256666666 777778888888888888776654 445677
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHh
Q psy767 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241 (902)
Q Consensus 162 yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (902)
|..+...|...|++++|.++|+++.+.. ..+...+..+...+...|++++|...++.+..
T Consensus 94 ~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~------------------- 153 (243)
T 2q7f_A 94 YYGAGNVYVVKEMYKEAKDMFEKALRAG-MENGDLFYMLGTVLVKLEQPKLALPYLQRAVE------------------- 153 (243)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHT-CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHH-------------------
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHH-------------------
Confidence 7777778888888888888888777653 23455666666666666666655555444322
Q ss_pred cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 242 ~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~ 289 (902)
.. +.+...|..+...|.+.|++++|...|++
T Consensus 154 ----------------~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 184 (243)
T 2q7f_A 154 ----------------LN-ENDTEARFQFGMCLANEGMLDEALSQFAA 184 (243)
T ss_dssp ----------------HC-TTCHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred ----------------hC-CccHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 11 33556677777777777777777777775
No 52
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.00 E-value=9.6e-09 Score=103.81 Aligned_cols=202 Identities=8% Similarity=-0.033 Sum_probs=151.1
Q ss_pred HHHHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHH
Q psy767 41 LLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVT 120 (902)
Q Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t 120 (902)
.+...+..+...+...|++++|...|...... .+.+...|..+...|...|++++|...|++..+.. +.+..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~ 78 (225)
T 2vq2_A 6 QVSNIKTQLAMEYMRGQDYRQATASIEDALKS------DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIK-PDSAEI 78 (225)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh------CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-CCChHH
Confidence 34556677788889999999999999988861 23467889999999999999999999999998754 236777
Q ss_pred HHHHHHhHHHHHHHHHc-CCHHHHHHHHHHhhhCCCCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHH
Q psy767 121 YQQLISNSKLISKYCQD-GNIEGATKILEFMRDKTFPI-SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198 (902)
Q Consensus 121 ~~~ll~~~~li~~~~~~-g~~~~A~~l~~~m~~~~~~p-~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~ 198 (902)
+..+ ...|... |++++|...|+.+.+.+..| +...|..+...+...|++++|+..|+++.+.. ..+...+.
T Consensus 79 ~~~l------~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~ 151 (225)
T 2vq2_A 79 NNNY------GWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ-PQFPPAFK 151 (225)
T ss_dssp HHHH------HHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHH
T ss_pred HHHH------HHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCchHHH
Confidence 8888 9999999 99999999999998733333 36788999999999999999999999998864 23577888
Q ss_pred HHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy767 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256 (902)
Q Consensus 199 ~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~ 256 (902)
.+...+...|++++|...++.+...........+.....++...|+.+.|..+++.+.
T Consensus 152 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 209 (225)
T 2vq2_A 152 ELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQ 209 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 8888999999999888887776553221122222333333333444444444444443
No 53
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.95 E-value=9.3e-08 Score=99.99 Aligned_cols=235 Identities=9% Similarity=-0.013 Sum_probs=164.6
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCccc
Q psy767 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314 (902)
Q Consensus 235 ~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~ 314 (902)
....+...|+++.|...|++..+.. +.+...|..+...|...|++++|++.|++....+
T Consensus 9 ~a~~~~~~~~~~~A~~~~~~~l~~~-p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-------------------- 67 (272)
T 3u4t_A 9 YADFLFKNNNYAEAIEVFNKLEAKK-YNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKV-------------------- 67 (272)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHTT-CCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTS--------------------
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--------------------
Confidence 4445556777778888888777653 3345578888889999999999999998742211
Q ss_pred HHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCc-ccHHHHHHHHHHcC
Q psy767 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVN-GDYLDIIHALAVSG 392 (902)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~-~~~~~li~~~~~~g 392 (902)
........+|..+...|...|++++|...|++. ...|.. ..|..+...|...|
T Consensus 68 -------------------------~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~ 122 (272)
T 3u4t_A 68 -------------------------NATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKG 122 (272)
T ss_dssp -------------------------CTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTT
T ss_pred -------------------------CchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcc
Confidence 011113456788888999999999999999873 333333 34888999999999
Q ss_pred ChHHHHHHHHHcccCCCCCCCHHH---HHH-HHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCcc
Q psy767 393 HGEYIDEIISKIQPGVGYSADAAN---HIY-HLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGY 468 (902)
Q Consensus 393 ~~~~A~~l~~~m~~~~g~~pd~~t---~i~-~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~ 468 (902)
++++|.+.|++..+ ..|+... .+. .+...+++++|...|++..+.. |..+
T Consensus 123 ~~~~A~~~~~~al~---~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~---p~~~-------------------- 176 (272)
T 3u4t_A 123 NFPLAIQYMEKQIR---PTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELK---PNIY-------------------- 176 (272)
T ss_dssp CHHHHHHHHGGGCC---SSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---TTCH--------------------
T ss_pred CHHHHHHHHHHHhh---cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---ccch--------------------
Confidence 99999999999988 4565543 333 4556779999999999888752 2211
Q ss_pred ccchHHHHHHHHhcCC---hHHHHHHHHHHHHccCCCCC-----ccchHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCCC
Q psy767 469 SADAANHIYHLINKGQ---IDAAYRIVNTLARSANINGE-----QLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHP 540 (902)
Q Consensus 469 ~~~~~~li~~~~k~g~---~~~A~~l~~~m~~~~~~~~~-----~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~g~~P 540 (902)
...+.+...+...|+ +++|...++.........+. ...+|..+...|...|+ .++|+..+++..+. .|
T Consensus 177 -~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~A~~~~~~al~~--~p 252 (272)
T 3u4t_A 177 -IGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRD-KVKADAAWKNILAL--DP 252 (272)
T ss_dssp -HHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHH--CT
T ss_pred -HHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhc--Cc
Confidence 012334455666677 88888888887765422211 12477888999999999 99999999998774 46
Q ss_pred ChhhH
Q psy767 541 RAFNL 545 (902)
Q Consensus 541 d~~t~ 545 (902)
+....
T Consensus 253 ~~~~a 257 (272)
T 3u4t_A 253 TNKKA 257 (272)
T ss_dssp TCHHH
T ss_pred cHHHH
Confidence 64443
No 54
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.92 E-value=1.9e-08 Score=112.52 Aligned_cols=131 Identities=11% Similarity=-0.036 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCH----HHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhC----C
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNR----VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK----T 154 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~----~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~----~ 154 (902)
...+..+...+...|++++|...|++..+.... +. ..|..+ ...|...|++++|...|++.... +
T Consensus 48 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l------g~~~~~~g~~~~A~~~~~~al~~~~~~~ 120 (411)
T 4a1s_A 48 CLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQL------GNAYFYLGDYNKAMQYHKHDLTLAKSMN 120 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHH------HHHHHHCCCHHHHHHHHHHHHHHHHHcc
Confidence 344556777889999999999999999876322 33 356666 88899999999999999887542 1
Q ss_pred -CCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHHcCC-----------------hh
Q psy767 155 -FPISEGVFNALIYGHSQANDMASAEGILTMMSQA----GLEP-SAQTYTKLMCGYAKHGD-----------------MD 211 (902)
Q Consensus 155 -~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~----g~~p-d~~ty~~ll~a~~~~g~-----------------~~ 211 (902)
.+....+|..+...|...|++++|...|++.... +-.| ...++..+...|...|+ ++
T Consensus 121 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~ 200 (411)
T 4a1s_A 121 DRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALT 200 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHH
Confidence 1234467888999999999999999999987653 1111 23477778888888888 77
Q ss_pred HHHHHHHhc
Q psy767 212 SIKTKIPSL 220 (902)
Q Consensus 212 ~a~~l~~~~ 220 (902)
+|...+++.
T Consensus 201 ~A~~~~~~a 209 (411)
T 4a1s_A 201 RAVEFYQEN 209 (411)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777666554
No 55
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.91 E-value=4.5e-07 Score=97.27 Aligned_cols=196 Identities=10% Similarity=0.019 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHC----CCc----hHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHH-------HcCCH-------
Q psy767 83 ISHYNALLRVYLDN----EHT----FSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC-------QDGNI------- 140 (902)
Q Consensus 83 ~~~yn~li~~~~~~----g~~----~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~-------~~g~~------- 140 (902)
...|...+....++ ++. ++|..+|++..... +-+...|..+ ...+. +.|++
T Consensus 8 ~~~W~~yi~~E~~~~~~~~~~~~~~~~a~~~~~~al~~~-p~~~~~w~~~------~~~~~~~~~~l~~~g~~~~~~~~~ 80 (308)
T 2ond_A 8 VDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVL-GHHPDIWYEA------AQYLEQSSKLLAEKGDMNNAKLFS 80 (308)
T ss_dssp HHHHHHHHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHH-TTCHHHHHHH------HHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccCCchHHHHHHHHHHHHHHHHHc-CCCHHHHHHH------HHHHHHhchhhhhccchhhcccch
Confidence 45677777765554 233 67889999988743 2356677766 55554 45885
Q ss_pred HHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC-HH-HHHHHHHHHHHcCChhHHHHHHH
Q psy767 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS-AQ-TYTKLMCGYAKHGDMDSIKTKIP 218 (902)
Q Consensus 141 ~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd-~~-ty~~ll~a~~~~g~~~~a~~l~~ 218 (902)
++|..+|++....--+-+...|..+...+.+.|++++|..+|++..+. .|+ .. .|..+...+.+.|++++|..+|+
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 158 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI--EDIDPTLVYIQYMKFARRAEGIKSGRMIFK 158 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS--SSSCTHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc--cccCccHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 899999999887322445678999999999999999999999999985 554 33 78888999999999999999998
Q ss_pred hcccCCCccchhhHHHHHHHH-HhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 219 SLKPQSELFLCFSFQLTNLLI-LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~ 289 (902)
......... ...+.....+. ...|+.+.|..+|+...+.. +-+...|..++..+.+.|++++|..+|++
T Consensus 159 ~a~~~~p~~-~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~g~~~~A~~~~~~ 228 (308)
T 2ond_A 159 KAREDARTR-HHVYVTAALMEYYCSKDKSVAFKIFELGLKKY-GDIPEYVLAYIDYLSHLNEDNNTRVLFER 228 (308)
T ss_dssp HHHTSTTCC-THHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHhcCCCC-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 887754322 22222111111 12577777777777766542 33566677777777777777777777765
No 56
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.91 E-value=1.9e-08 Score=114.51 Aligned_cols=344 Identities=13% Similarity=0.032 Sum_probs=207.6
Q ss_pred HHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCH---HHHHHHHHHhhhCCCCCCHHHHHHH
Q psy767 89 LLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI---EGATKILEFMRDKTFPISEGVFNAL 165 (902)
Q Consensus 89 li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~---~~A~~l~~~m~~~~~~p~~~~yn~L 165 (902)
+...+.+.|++++|.++|++..+.|. |+ .+..+ -..|...|+. ++|...|+...+. +...+..|
T Consensus 9 la~~~~~~g~~~~A~~~~~~aa~~g~-~~--A~~~L------g~~y~~~g~~~d~~~A~~~~~~A~~~----~~~A~~~L 75 (452)
T 3e4b_A 9 LANEALKRGDTVTAQQNYQQLAELGY-SE--AQVGL------ADIQVGTRDPAQIKQAEATYRAAADT----SPRAQARL 75 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC-CT--GGGTC------C--------------------------------CHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHCCC-HH--HHHHH------HHHHHccCCCCCHHHHHHHHHHHHhC----CHHHHHHH
Confidence 56667788999999999999988763 23 34445 5566667887 8999999887754 44667777
Q ss_pred HHHHHhCC-----CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhH---HHHHHHhcccCCCccchhhHHHHHH
Q psy767 166 IYGHSQAN-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNL 237 (902)
Q Consensus 166 i~~~~~~g-----~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~---a~~l~~~~~~~~~~~~~~~~~~~~~ 237 (902)
-..+...| +.++|+..|+...+.|.. + .+..|...|...+.... +.+.+......+ .......+..
T Consensus 76 g~~~~~~~~~~~~~~~~A~~~~~~Aa~~g~~-~--A~~~Lg~~y~~~~~~~~~~~a~~~~~~a~~~g---~~~a~~~Lg~ 149 (452)
T 3e4b_A 76 GRLLAAKPGATEAEHHEAESLLKKAFANGEG-N--TLIPLAMLYLQYPHSFPNVNAQQQISQWQAAG---YPEAGLAQVL 149 (452)
T ss_dssp HHHHHTC--CCHHHHHHHHHHHHHHHHTTCS-S--CHHHHHHHHHHCGGGCTTCCHHHHHHHHHHHT---CTTHHHHHHH
T ss_pred HHHHHhCCCCCCcCHHHHHHHHHHHHHCCCH-H--HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHCC---CHHHHHHHHH
Confidence 76555555 788999999999998743 3 56666677776665443 333333333222 2344555556
Q ss_pred HHHhcC----CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHhccCCCCCCHHHHHHHHHHcC
Q psy767 238 LILVSS----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310 (902)
Q Consensus 238 ~~~~~g----~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g---~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~ 310 (902)
++...+ ..+.+..+++..... .|+ .+..|-..|...| +.++|++.|++....+
T Consensus 150 ~y~~~~~~~~~~~~a~~~~~~a~~~--~~~--a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g---------------- 209 (452)
T 3e4b_A 150 LYRTQGTYDQHLDDVERICKAALNT--TDI--CYVELATVYQKKQQPEQQAELLKQMEAGVSRG---------------- 209 (452)
T ss_dssp HHHHHTCGGGGHHHHHHHHHHHTTT--CTT--HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT----------------
T ss_pred HHHcCCCcccCHHHHHHHHHHHHcC--CHH--HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCC----------------
Confidence 666555 444555555544422 333 8888888899999 8899999998743332
Q ss_pred CcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHcCCCCCcccHHHHHH
Q psy767 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH----GDMDSIRRLLAQNGSSLVNGDYLDIIH 386 (902)
Q Consensus 311 ~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~----g~~~~A~~~~~~m~~~~~~~~~~~li~ 386 (902)
.++...+..|...|... +++++|...|++.. .+....+..+..
T Consensus 210 --------------------------------~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g~~~a~~~Lg~ 256 (452)
T 3e4b_A 210 --------------------------------TVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PGYPASWVSLAQ 256 (452)
T ss_dssp --------------------------------CSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GGSTHHHHHHHH
T ss_pred --------------------------------CHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CCCHHHHHHHHH
Confidence 33444445566666544 68999999999866 444444666666
Q ss_pred H-H--HHcCChHHHHHHHHHcccCCCCCCCHHHHHHHHHHcC-----CHHHHHHHHHHHHhccCCCCCcccchhhHHHhh
Q psy767 387 A-L--AVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG-----QIDAAYRIVNTLARSANINGEQLPVGGFLVRHM 458 (902)
Q Consensus 387 ~-~--~~~g~~~~A~~l~~~m~~~~g~~pd~~t~i~~l~~~g-----~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~ 458 (902)
. + ...+++++|.+.|++..+ .| .|+....+..+...| ++++|..+|++.. . .
T Consensus 257 ~~~~~~~~~d~~~A~~~~~~Aa~-~g-~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa-~-----g------------ 316 (452)
T 3e4b_A 257 LLYDFPELGDVEQMMKYLDNGRA-AD-QPRAELLLGKLYYEGKWVPADAKAAEAHFEKAV-G-----R------------ 316 (452)
T ss_dssp HHHHSGGGCCHHHHHHHHHHHHH-TT-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHTTT-T-----T------------
T ss_pred HHHhCCCCCCHHHHHHHHHHHHH-CC-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHh-C-----C------------
Confidence 6 3 457889999999999877 55 344444444444566 8999999998765 1 1
Q ss_pred hhcCCCCCccccchHHHHHHHHh----cCChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHc---CCCHHHHHHHHH
Q psy767 459 VKTNQPGVGYSADAANHIYHLIN----KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKT---NQPIDKVLAVCH 531 (902)
Q Consensus 459 ~~~~~~~~g~~~~~~~li~~~~k----~g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~---g~~~~~A~~l~~ 531 (902)
+....+++-..|.. ..+.++|..+|+.....+.. .....|...|... ..+.++|...|+
T Consensus 317 ---------~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~-----~A~~~Lg~~y~~G~g~~~d~~~A~~~~~ 382 (452)
T 3e4b_A 317 ---------EVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQN-----SADFAIAQLFSQGKGTKPDPLNAYVFSQ 382 (452)
T ss_dssp ---------CHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTCT-----THHHHHHHHHHSCTTBCCCHHHHHHHHH
T ss_pred ---------CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhChH-----HHHHHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 11123445444544 33899999999998876532 3455555555431 223899999999
Q ss_pred HHHHCCC
Q psy767 532 RLTDENL 538 (902)
Q Consensus 532 ~m~~~g~ 538 (902)
...+.|.
T Consensus 383 ~A~~~g~ 389 (452)
T 3e4b_A 383 LAKAQDT 389 (452)
T ss_dssp HHHTTCC
T ss_pred HHHHCCC
Confidence 9888875
No 57
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.89 E-value=3.9e-08 Score=105.74 Aligned_cols=119 Identities=12% Similarity=-0.046 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCC----HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhC----CC
Q psy767 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPN----RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK----TF 155 (902)
Q Consensus 84 ~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd----~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~----~~ 155 (902)
..+......+...|++++|...|+++.+.... + ...+..+ ...|...|++++|...++..... +-
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l------~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 78 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQL------GNAYFYLHDYAKALEYHHHDLTLARTIGD 78 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHHhhcccc
Confidence 44556667788999999999999999876322 3 3456666 88899999999999999886432 21
Q ss_pred C-CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCC-CCC----HHHHHHHHHHHHHcCC
Q psy767 156 P-ISEGVFNALIYGHSQANDMASAEGILTMMSQAGL-EPS----AQTYTKLMCGYAKHGD 209 (902)
Q Consensus 156 ~-p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~-~pd----~~ty~~ll~a~~~~g~ 209 (902)
. ....++..+...|...|++++|...|++..+... .++ ..++..+...|...|+
T Consensus 79 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 79 QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 2 2346788899999999999999999988755311 122 3377778888888888
No 58
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.89 E-value=3.8e-08 Score=109.43 Aligned_cols=123 Identities=11% Similarity=-0.031 Sum_probs=93.1
Q ss_pred CCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCC----HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhh---
Q psy767 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPN----RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRD--- 152 (902)
Q Consensus 80 ~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd----~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~--- 152 (902)
.+....+......+...|++++|...|++..+.... + ..+|..+ ...|...|++++|...|+....
T Consensus 6 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l------~~~~~~~g~~~~A~~~~~~al~~~~ 78 (406)
T 3sf4_A 6 EASCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQL------GNAYFYLHDYAKALEYHHHDLTLAR 78 (406)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHH------HHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 356677888888899999999999999999876322 3 2456666 8889999999999999987643
Q ss_pred -CCCCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCC-CCC----HHHHHHHHHHHHHcCC
Q psy767 153 -KTFPI-SEGVFNALIYGHSQANDMASAEGILTMMSQAGL-EPS----AQTYTKLMCGYAKHGD 209 (902)
Q Consensus 153 -~~~~p-~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~-~pd----~~ty~~ll~a~~~~g~ 209 (902)
.+-.| ...+|..+...|...|++++|+..|++...... .++ ..++..+...|...|+
T Consensus 79 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 79 TIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 22222 246788889999999999999999998765310 112 3477778888888888
No 59
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.87 E-value=4.4e-08 Score=104.45 Aligned_cols=205 Identities=12% Similarity=0.089 Sum_probs=160.6
Q ss_pred CCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHC-------CCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhh
Q psy767 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ-------GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRD 152 (902)
Q Consensus 80 ~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~-------g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~ 152 (902)
+.+..+|..+...|...|++++|..+|+++.+. .......++..+ ...|...|++++|...|+....
T Consensus 24 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l------a~~~~~~g~~~~A~~~~~~al~ 97 (311)
T 3nf1_A 24 PARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNIL------ALVYRDQNKYKDAANLLNDALA 97 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH------HHHHHHCCCHHHHHHHHHHHHH
Confidence 345677999999999999999999999998763 122234556666 8899999999999999998765
Q ss_pred C------C-CCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC------CCCC-CHHHHHHHHHHHHHcCChhHHHHHHH
Q psy767 153 K------T-FPISEGVFNALIYGHSQANDMASAEGILTMMSQA------GLEP-SAQTYTKLMCGYAKHGDMDSIKTKIP 218 (902)
Q Consensus 153 ~------~-~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~------g~~p-d~~ty~~ll~a~~~~g~~~~a~~l~~ 218 (902)
. + .+....+|..+...|...|++++|...|++..+. +-.| ...++..+...|...|++++|...++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 177 (311)
T 3nf1_A 98 IREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQ 177 (311)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3 2 2334577899999999999999999999998764 2223 34567888899999999999999998
Q ss_pred hcccC------C-CccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHC---------------------------------
Q psy767 219 SLKPQ------S-ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA--------------------------------- 258 (902)
Q Consensus 219 ~~~~~------~-~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~--------------------------------- 258 (902)
..... + .......+..+..++...|++++|...++++...
T Consensus 178 ~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (311)
T 3nf1_A 178 RALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDG 257 (311)
T ss_dssp HHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhH
Confidence 88653 2 2233456667777888899999999999988852
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy767 259 ---------------GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 259 ---------------g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m 290 (902)
..+.+..+|..+...|.+.|++++|.+.|++.
T Consensus 258 ~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 304 (311)
T 3nf1_A 258 TSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAA 304 (311)
T ss_dssp CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 11234567888999999999999999999874
No 60
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=98.87 E-value=1.1e-07 Score=104.96 Aligned_cols=236 Identities=9% Similarity=-0.028 Sum_probs=183.8
Q ss_pred HHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHCCCCCCHHHH
Q psy767 119 VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND-MASAEGILTMMSQAGLEPSAQTY 197 (902)
Q Consensus 119 ~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~-~~~A~~l~~~M~~~g~~pd~~ty 197 (902)
..|..+ ...+.+.|++++|+..|+.....+ +-+...|+.+-.++...|+ +++|+..|++...... -+...|
T Consensus 98 ~a~~~l------g~~~~~~g~~~~Al~~~~~al~l~-P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P-~~~~a~ 169 (382)
T 2h6f_A 98 DVYDYF------RAVLQRDERSERAFKLTRDAIELN-AANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQP-KNYQVW 169 (382)
T ss_dssp HHHHHH------HHHHHHTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-TCHHHH
T ss_pred HHHHHH------HHHHHHCCChHHHHHHHHHHHHhC-ccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCC-CCHHHH
Confidence 446666 778889999999999999998875 5678899999999999997 9999999999998742 267799
Q ss_pred HHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH-
Q psy767 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK- 276 (902)
Q Consensus 198 ~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~- 276 (902)
..+-.++...|++++|+..|+.+...... +...+..+..++...|++++|...|+++.+.. +-+...|+.+..+|.+
T Consensus 170 ~~~g~~~~~~g~~~eAl~~~~kal~ldP~-~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~-P~~~~a~~~lg~~l~~l 247 (382)
T 2h6f_A 170 HHRRVLVEWLRDPSQELEFIADILNQDAK-NYHAWQHRQWVIQEFKLWDNELQYVDQLLKED-VRNNSVWNQRYFVISNT 247 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC-TTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHh
Confidence 99999999999999999999998875433 34556667777777889999999999888765 4567888888888888
Q ss_pred cCCHHHHH-----HHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCC-CHHHHH
Q psy767 277 HGDMDSVR-----RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP-SAQTYT 350 (902)
Q Consensus 277 ~g~~~~A~-----~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p-~~~t~~ 350 (902)
.|..++|. +.|++.. . +.| +...|+
T Consensus 248 ~~~~~eA~~~~el~~~~~Al-----------------------------------------------~--l~P~~~~a~~ 278 (382)
T 2h6f_A 248 TGYNDRAVLEREVQYTLEMI-----------------------------------------------K--LVPHNESAWN 278 (382)
T ss_dssp TCSCSHHHHHHHHHHHHHHH-----------------------------------------------H--HSTTCHHHHH
T ss_pred cCcchHHHHHHHHHHHHHHH-----------------------------------------------H--HCCCCHHHHH
Confidence 56556663 5555421 1 234 567888
Q ss_pred HHHHHHHHcC--CHHHHHHHHHHcCCCCCccc-HHHHHHHHHHcC---------ChHHHHHHHHHc-ccCCCCCCCHHH
Q psy767 351 KLMCGYAKHG--DMDSIRRLLAQNGSSLVNGD-YLDIIHALAVSG---------HGEYIDEIISKI-QPGVGYSADAAN 416 (902)
Q Consensus 351 ~Li~~y~~~g--~~~~A~~~~~~m~~~~~~~~-~~~li~~~~~~g---------~~~~A~~l~~~m-~~~~g~~pd~~t 416 (902)
.+...|...| ++++|...+.++...+..+. +..+...|...| ..++|.++|+++ .+ +.|....
T Consensus 279 ~l~~ll~~~g~~~~~~a~~~~~~~~~~p~~~~al~~La~~~~~~~~~~~~~~~~~~~~A~~~~~~l~~~---~DP~r~~ 354 (382)
T 2h6f_A 279 YLKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKE---KDTIRKE 354 (382)
T ss_dssp HHHHHHTTTCGGGCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHT---TCGGGHH
T ss_pred HHHHHHHccCccchHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH---hCchhHH
Confidence 8888888888 68999999988843333332 667888888764 258999999999 66 6776543
No 61
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.84 E-value=5.3e-08 Score=108.84 Aligned_cols=266 Identities=9% Similarity=-0.032 Sum_probs=191.8
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCH----HHHHHHHHHHHhCCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISE----GVFNALIYGHSQANDMASAEGILTMMSQA----GLEP-SAQTYTKLM 201 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~----~~yn~Li~~~~~~g~~~~A~~l~~~M~~~----g~~p-d~~ty~~ll 201 (902)
...+...|++++|...|+...+.+ +.+. ..|..+...|...|++++|+..|++..+. +-.| ...++..+.
T Consensus 55 g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~ 133 (411)
T 4a1s_A 55 GERLCNAGDCRAGVAFFQAAIQAG-TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLG 133 (411)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHHHHHhc-ccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHH
Confidence 677889999999999999988764 2333 47889999999999999999999987653 2122 345778888
Q ss_pred HHHHHcCChhHHHHHHHhcccCC-----CccchhhHHHHHHHHHhcCC-----------------HHHHHHHHHHHHHC-
Q psy767 202 CGYAKHGDMDSIKTKIPSLKPQS-----ELFLCFSFQLTNLLILVSSD-----------------MASAEGILTMMSQA- 258 (902)
Q Consensus 202 ~a~~~~g~~~~a~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~-----------------~~~A~~l~~~m~~~- 258 (902)
..|...|++++|...+++..... .......+..+..++...|+ ++.|...+.+....
T Consensus 134 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~ 213 (411)
T 4a1s_A 134 NTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLM 213 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999988776531 22233456666777777899 99999998876542
Q ss_pred ---CC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhccccc
Q psy767 259 ---GL-EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334 (902)
Q Consensus 259 ---g~-~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 334 (902)
+- .....+|..+...|...|++++|+..|++....
T Consensus 214 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~----------------------------------------- 252 (411)
T 4a1s_A 214 RDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRI----------------------------------------- 252 (411)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----------------------------------------
T ss_pred HHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH-----------------------------------------
Confidence 11 122357888889999999999999999873210
Q ss_pred chHHhcCCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHc----CCCCC----cccHHHHHHHHHHcCChHHHHHHHHHcc
Q psy767 335 PMMSQAGLE-PSAQTYTKLMCGYAKHGDMDSIRRLLAQN----GSSLV----NGDYLDIIHALAVSGHGEYIDEIISKIQ 405 (902)
Q Consensus 335 ~~m~~~g~~-p~~~t~~~Li~~y~~~g~~~~A~~~~~~m----~~~~~----~~~~~~li~~~~~~g~~~~A~~l~~~m~ 405 (902)
....+.. ....++..+...|...|++++|...|++. ...+. ...+..+...|...|++++|.+.+++..
T Consensus 253 --~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 330 (411)
T 4a1s_A 253 --AREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHL 330 (411)
T ss_dssp --HHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred --HHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 0111100 11347788899999999999999999872 11111 1226778889999999999999999876
Q ss_pred cCC---CCCCCHH----HHHHHHHHcCCHHHHHHHHHHHHhc
Q psy767 406 PGV---GYSADAA----NHIYHLINKGQIDAAYRIVNTLARS 440 (902)
Q Consensus 406 ~~~---g~~pd~~----t~i~~l~~~g~~~~A~~~~~~m~~~ 440 (902)
... +..+... .+...+...|++++|...+++..+.
T Consensus 331 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 372 (411)
T 4a1s_A 331 AIAQELGDRIGEARACWSLGNAHSAIGGHERALKYAEQHLQL 372 (411)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 511 1111111 1344566999999999999988764
No 62
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.84 E-value=1.2e-07 Score=105.32 Aligned_cols=275 Identities=10% Similarity=0.006 Sum_probs=196.0
Q ss_pred CCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCC----HHHHHHHHHHHHhCCCHHHHHHHHHHHHHC---
Q psy767 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS----EGVFNALIYGHSQANDMASAEGILTMMSQA--- 188 (902)
Q Consensus 116 pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~----~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~--- 188 (902)
+....+... ...+...|++++|...|+...+.+ +.+ ...|..+...|...|++++|...|++....
T Consensus 7 ~~~~~l~~~------g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 79 (406)
T 3sf4_A 7 ASCLELALE------GERLCKSGDCRAGVSFFEAAVQVG-TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLART 79 (406)
T ss_dssp CCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH------HHHHHHhccHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 345555556 778889999999999999988764 333 357888999999999999999999987543
Q ss_pred -CCCCC-HHHHHHHHHHHHHcCChhHHHHHHHhcccCC-----CccchhhHHHHHHHHHhcCC-----------------
Q psy767 189 -GLEPS-AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS-----ELFLCFSFQLTNLLILVSSD----------------- 244 (902)
Q Consensus 189 -g~~pd-~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~----------------- 244 (902)
+-.|. ..++..+...|...|++++|...+....... .......+..+..++...|+
T Consensus 80 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a 159 (406)
T 3sf4_A 80 IGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEV 159 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHH
T ss_pred ccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhH
Confidence 22222 4477888899999999999999888775421 11123456666677777899
Q ss_pred ---HHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHH
Q psy767 245 ---MASAEGILTMMSQA----GLEP-SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316 (902)
Q Consensus 245 ---~~~A~~l~~~m~~~----g~~p-d~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~ 316 (902)
++.|...+.+.... +..+ ...+|..+...|...|++++|...|++....
T Consensus 160 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~----------------------- 216 (406)
T 3sf4_A 160 RDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLI----------------------- 216 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHH-----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH-----------------------
Confidence 99999998876542 2111 2457888889999999999999999873210
Q ss_pred HHHHHHHHhhhhhcccccchHHhcCCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHc----CCCCCc----ccHHHHHHH
Q psy767 317 EVSAIVCFVNICFHWLEGPMMSQAGLEP-SAQTYTKLMCGYAKHGDMDSIRRLLAQN----GSSLVN----GDYLDIIHA 387 (902)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~m~~~g~~p-~~~t~~~Li~~y~~~g~~~~A~~~~~~m----~~~~~~----~~~~~li~~ 387 (902)
....+..+ ...++..+...|...|++++|...|++. ...+.. ..+..+...
T Consensus 217 --------------------~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 276 (406)
T 3sf4_A 217 --------------------AKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNT 276 (406)
T ss_dssp --------------------HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --------------------HHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHH
Confidence 11111111 2347888899999999999999999872 111121 126778899
Q ss_pred HHHcCChHHHHHHHHHcccC---CCCCCCHHH----HHHHHHHcCCHHHHHHHHHHHHhc
Q psy767 388 LAVSGHGEYIDEIISKIQPG---VGYSADAAN----HIYHLINKGQIDAAYRIVNTLARS 440 (902)
Q Consensus 388 ~~~~g~~~~A~~l~~~m~~~---~g~~pd~~t----~i~~l~~~g~~~~A~~~~~~m~~~ 440 (902)
|...|++++|.+.+++.... .+-.+.... +...+...|++++|...+++..+.
T Consensus 277 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 336 (406)
T 3sf4_A 277 YTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI 336 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 99999999999999987652 111111111 334556899999999999987654
No 63
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.82 E-value=1.7e-07 Score=100.61 Aligned_cols=282 Identities=10% Similarity=-0.051 Sum_probs=182.4
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC-----HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHH
Q psy767 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPS-----AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235 (902)
Q Consensus 161 ~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd-----~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~ 235 (902)
.+...-..+...|++++|..+|+++.+.. |+ ...|..+...|...|++++|...++....
T Consensus 7 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~--~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~------------- 71 (338)
T 3ro2_A 7 ELALEGERLCKSGDCRAGVSFFEAAVQVG--TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLT------------- 71 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-------------
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhC--cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------------
Confidence 34445566777888888888888877753 33 34666777777778888877776664322
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccH
Q psy767 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315 (902)
Q Consensus 236 ~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~ 315 (902)
+..... .......++..+...|...|++++|...|.+....
T Consensus 72 ---------------~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~---------------------- 112 (338)
T 3ro2_A 72 ---------------LARTIG--DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDI---------------------- 112 (338)
T ss_dssp ---------------HHHHHT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------------
T ss_pred ---------------Hhhccc--ccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH----------------------
Confidence 211110 00112456777888899999999999999873210
Q ss_pred HHHHHHHHHhhhhhcccccchHHhcCCCC-CHHHHHHHHHHHHHcCC--------------------HHHHHHHHHHc--
Q psy767 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEP-SAQTYTKLMCGYAKHGD--------------------MDSIRRLLAQN-- 372 (902)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~m~~~g~~p-~~~t~~~Li~~y~~~g~--------------------~~~A~~~~~~m-- 372 (902)
....+-.+ ...++..+...|...|+ +++|...+++.
T Consensus 113 ---------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~ 171 (338)
T 3ro2_A 113 ---------------------SRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLS 171 (338)
T ss_dssp ---------------------HHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------HHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 11111111 13477788888999999 89998888762
Q ss_pred --CCCCCcc----cHHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHH-------HHHHHHHHcCCHHHHHHHHHHHHh
Q psy767 373 --GSSLVNG----DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA-------NHIYHLINKGQIDAAYRIVNTLAR 439 (902)
Q Consensus 373 --~~~~~~~----~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~-------t~i~~l~~~g~~~~A~~~~~~m~~ 439 (902)
...+..+ .+..+...+...|++++|.+.+++..+...-.++.. .+...+...|++++|...+++...
T Consensus 172 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 251 (338)
T 3ro2_A 172 LVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLL 251 (338)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 1111122 267788899999999999999998765211112211 134456699999999999998876
Q ss_pred ccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHhcCChHHHHHHHHHHHHccCC---CCCccchHHHHHHHH
Q psy767 440 SANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANI---NGEQLPVGGFLVRHM 516 (902)
Q Consensus 440 ~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k~g~~~~A~~l~~~m~~~~~~---~~~~~~~~n~li~~~ 516 (902)
...-.+..... ......+...|...|++++|...++........ +.....++..+...+
T Consensus 252 ~~~~~~~~~~~------------------~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~ 313 (338)
T 3ro2_A 252 LARQLKDRAVE------------------AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAY 313 (338)
T ss_dssp HHHHTTCHHHH------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHhhcchhHH------------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 42221111000 001233555688999999999999887654311 111234677889999
Q ss_pred HHcCCCHHHHHHHHHHHHHC
Q psy767 517 VKTNQPIDKVLAVCHRLTDE 536 (902)
Q Consensus 517 ~~~g~~~~~A~~l~~~m~~~ 536 (902)
...|+ +++|...+++..+.
T Consensus 314 ~~~g~-~~~A~~~~~~a~~~ 332 (338)
T 3ro2_A 314 TALGN-HDQAMHFAEKHLEI 332 (338)
T ss_dssp HHHTC-HHHHHHHHHHHHHC
T ss_pred HHcCC-hHHHHHHHHHHHHH
Confidence 99999 99999999997664
No 64
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.81 E-value=3.3e-07 Score=89.67 Aligned_cols=165 Identities=15% Similarity=0.052 Sum_probs=118.1
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV 161 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~ 161 (902)
++..|..+-..|.+.|++++|+..|++..+.... +..+|..+ ..+|.+.|++++|...++...... +-+...
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l------a~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~ 75 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPN-NVETLLKL------GKTYMDIGLPNDAIESLKKFVVLD-TTSAEA 75 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-CCCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHH------HHHHHHCCCHHHHHHHHHHHHhcC-chhHHH
Confidence 5667888888888888888888888887765322 55667667 777888888888888887776654 445666
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHh
Q psy767 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241 (902)
Q Consensus 162 yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (902)
+..+...+...++++.|...+.+..... .-+...+..+...|.+.|++++|.+.|+...+
T Consensus 76 ~~~~~~~~~~~~~~~~a~~~~~~a~~~~-~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~------------------- 135 (184)
T 3vtx_A 76 YYILGSANFMIDEKQAAIDALQRAIALN-TVYADAYYKLGLVYDSMGEHDKAIEAYEKTIS------------------- 135 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-------------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHhCCchhHHHHHHHHHH-------------------
Confidence 7777777788888888888888777653 22455667777777777777766666555433
Q ss_pred cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhc
Q psy767 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291 (902)
Q Consensus 242 ~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~ 291 (902)
.. +.+..+|..+...|.+.|++++|++.|++..
T Consensus 136 ----------------~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 168 (184)
T 3vtx_A 136 ----------------IK-PGFIRAYQSIGLAYEGKGLRDEAVKYFKKAL 168 (184)
T ss_dssp ----------------HC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ----------------hc-chhhhHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 22 4556778888888888888888888888743
No 65
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.76 E-value=5.1e-08 Score=108.16 Aligned_cols=307 Identities=10% Similarity=-0.013 Sum_probs=198.2
Q ss_pred cCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHH--HCCCchHHH-----------HHHHHHHHCCCCCCHHH
Q psy767 54 CSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYL--DNEHTFSPT-----------DFLAKLESQGIEPNRVT 120 (902)
Q Consensus 54 ~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~--~~g~~~~A~-----------~l~~~M~~~g~~pd~~t 120 (902)
.+.+++++|..+.+++... .....-.+++..|-.++..-. -.+....+. +.++.+..... +...
T Consensus 23 i~~~~~~~A~~l~~~i~~~-~~~~~~~~~~~~y~~ll~~r~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~--~~~~ 99 (383)
T 3ulq_A 23 IRRFSIPDAEYLRREIKQE-LDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPRLSDLLLEIDKKQA--RLTG 99 (383)
T ss_dssp HHTTCHHHHHHHHHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHHGGGGGSCGGGSCCHHHHHHHHHHHTH--HHHH
T ss_pred HHHcCHHHHHHHHHHHHHH-HHhhccchHHHHHHHHHHHHHHHHHhhcCcccccccccccchhhHHHHHHhcCC--Cchh
Confidence 3467788888888777542 112222345555555544321 223333343 66666654211 1111
Q ss_pred HHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhC----CCCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCC-CC--
Q psy767 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDK----TFPI-SEGVFNALIYGHSQANDMASAEGILTMMSQAGL-EP-- 192 (902)
Q Consensus 121 ~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~----~~~p-~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~-~p-- 192 (902)
+....-.......+...|++++|...|+..... +-++ ...+|..+...|...|++++|+..+.+..+.-- .+
T Consensus 100 ~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 179 (383)
T 3ulq_A 100 LLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAY 179 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTT
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccc
Confidence 111000001155667899999999999998653 2112 346788999999999999999999998865311 11
Q ss_pred ---CHHHHHHHHHHHHHcCChhHHHHHHHhcccC----C-CccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHC----CC
Q psy767 193 ---SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ----S-ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA----GL 260 (902)
Q Consensus 193 ---d~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~----~-~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~----g~ 260 (902)
...++..+...|...|++++|...+...... + .......+..+..++...|+++.|...+++.... +.
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 1357888889999999999999998877642 1 1222345666777788899999999999988772 33
Q ss_pred -CCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHh
Q psy767 261 -EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339 (902)
Q Consensus 261 -~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~ 339 (902)
+....++..+...|.+.|++++|.+.|++.... ...
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-------------------------------------------~~~ 296 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAY-------------------------------------------SQK 296 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------------------------------------------HHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-------------------------------------------HHH
Confidence 344677899999999999999999999873210 111
Q ss_pred cCCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHcCCCCCccc-HHHHHHHHHHcCChHHHHHHHHHccc
Q psy767 340 AGLEPSAQTYTKLMCGYAKHGD---MDSIRRLLAQNGSSLVNGD-YLDIIHALAVSGHGEYIDEIISKIQP 406 (902)
Q Consensus 340 ~g~~p~~~t~~~Li~~y~~~g~---~~~A~~~~~~m~~~~~~~~-~~~li~~~~~~g~~~~A~~l~~~m~~ 406 (902)
.+-......+..+...|...|+ +++|..++++....+.... +..+...|...|++++|.+.|++...
T Consensus 297 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~ 367 (383)
T 3ulq_A 297 AGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQ 367 (383)
T ss_dssp HTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 1111122335567777888888 7888888887643322222 55677788888888888888877543
No 66
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.76 E-value=2.2e-07 Score=98.93 Aligned_cols=168 Identities=18% Similarity=0.155 Sum_probs=133.4
Q ss_pred HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhC-------CCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC--
Q psy767 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK-------TFPISEGVFNALIYGHSQANDMASAEGILTMMSQA-- 188 (902)
Q Consensus 118 ~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~-------~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~-- 188 (902)
..++..+ ...+...|++++|..+|+.+.+. +.+....++..+...|...|++++|+..|++....
T Consensus 27 ~~~~~~l------~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 100 (311)
T 3nf1_A 27 LRTLHNL------VIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIRE 100 (311)
T ss_dssp HHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH------HHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 4556666 88999999999999999998763 33445677899999999999999999999988764
Q ss_pred ----CCCC-CHHHHHHHHHHHHHcCChhHHHHHHHhcccC------C-CccchhhHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy767 189 ----GLEP-SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ------S-ELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256 (902)
Q Consensus 189 ----g~~p-d~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~------~-~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~ 256 (902)
+-.| ...++..+...|...|++++|...++..... + .......+..+..++...|++++|..++++..
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~ 180 (311)
T 3nf1_A 101 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRAL 180 (311)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 2223 3457888999999999999999999888753 2 23344556667777888999999999999887
Q ss_pred HC------CCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHhc
Q psy767 257 QA------GLEP-SAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291 (902)
Q Consensus 257 ~~------g~~p-d~~ty~~LI~a~~~~g~~~~A~~lf~~m~ 291 (902)
.. +-.| ...++..+...|...|++++|.+.|++..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 222 (311)
T 3nf1_A 181 EIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEIL 222 (311)
T ss_dssp HHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 64 2223 35578889999999999999999999854
No 67
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.75 E-value=2.9e-05 Score=91.71 Aligned_cols=424 Identities=11% Similarity=0.041 Sum_probs=262.1
Q ss_pred CCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCC---HHHHHHHHHHhhhCC-
Q psy767 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN---IEGATKILEFMRDKT- 154 (902)
Q Consensus 79 ~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~---~~~A~~l~~~m~~~~- 154 (902)
-+-|...|..++..+.+.+.++.+..+|+.+... ++.....|..- +..-.+.|+ ++.+..+|+......
T Consensus 62 np~d~~~W~~yi~~~~~~~~~~~aR~vyEraL~~-fP~~~~lW~~Y------i~~E~~~~~~~~~~~v~~lfeRal~~~~ 134 (679)
T 4e6h_A 62 QPTDIFLYVKLLKHHVSLKQWKQVYETFDKLHDR-FPLMANIWCMR------LSLEFDKMEELDAAVIEPVLARCLSKEL 134 (679)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHH------HHHHHTC--CCCHHHHHHHHHHHTCSSS
T ss_pred CcCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH-CCCCHHHHHHH------HHHHHhhCCcchHHHHHHHHHHHHHhcC
Confidence 3458999999999999999999999999999975 34456667777 888888888 999999999987654
Q ss_pred CCCCHHHHHHHHHHHHhCCCH--------HHHHHHHHHHHH-CCC-CCC-HHHHHHHHHHHH---------HcCChhHHH
Q psy767 155 FPISEGVFNALIYGHSQANDM--------ASAEGILTMMSQ-AGL-EPS-AQTYTKLMCGYA---------KHGDMDSIK 214 (902)
Q Consensus 155 ~~p~~~~yn~Li~~~~~~g~~--------~~A~~l~~~M~~-~g~-~pd-~~ty~~ll~a~~---------~~g~~~~a~ 214 (902)
.+|++..|..-+.-..+.++. +.+.++|+.... .|. .|+ ...|...+.... ..++++.+.
T Consensus 135 ~~~sv~LW~~Yl~f~~~~~~~~~~~~~~r~~vr~~FErAl~~vG~~d~~s~~iW~~Yi~f~~~~~~~~~~eeq~~~~~~R 214 (679)
T 4e6h_A 135 GNNDLSLWLSYITYVRKKNDIITGGEEARNIVIQAFQVVVDKCAIFEPKSIQFWNEYLHFLEHWKPVNKFEEQQRVQYIR 214 (679)
T ss_dssp CCCCHHHHHHHHHHHHHHSCSTTTHHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHTCCCCSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHhccccCcHHHHhHHHHHH
Confidence 248889999888766665543 334477776554 476 564 457777665433 234567788
Q ss_pred HHHHhcccCCCccchhhHHHHHHHHHh-------------cCCHHHHHHHHHHHHH--CCCC---------------C--
Q psy767 215 TKIPSLKPQSELFLCFSFQLTNLLILV-------------SSDMASAEGILTMMSQ--AGLE---------------P-- 262 (902)
Q Consensus 215 ~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------~g~~~~A~~l~~~m~~--~g~~---------------p-- 262 (902)
++|+.............+..+..+-.. ..+++.|...+.++.. .++. |
T Consensus 215 ~iy~raL~iP~~~~~~~w~~Y~~fe~~~~~~~a~~~~~e~~~~y~~Ar~~~~e~~~~~~~l~r~~p~~~~~~~~~~~p~~ 294 (679)
T 4e6h_A 215 KLYKTLLCQPMDCLESMWQRYTQWEQDVNQLTARRHIGELSAQYMNARSLYQDWLNITKGLKRNLPITLNQATESNLPKP 294 (679)
T ss_dssp HHHHHHTTSCCSSHHHHHHHHHHHHHHHCTTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCSSSTTCCTTTSCCT
T ss_pred HHHHHHHhCccHHHHHHHHHHHHHHHhcCcchHHHHHHHhhHHHHHHHHHHHHHHHHHHhHhhccccccccchhccCCCC
Confidence 999988864332222333222222111 1233445555544332 1211 1
Q ss_pred ---C---HHHHHHHHHHHHHcC-------CHHHHHHHHHHhccC-CCCCC-HHHHHHHHHHcCCcccHH-HHHHHHHHhh
Q psy767 263 ---S---AQTYTKLMCGYAKHG-------DMDSVRRLLAQSGSS-LVNGD-YLDIIHALAVSGHGEYID-EVSAIVCFVN 326 (902)
Q Consensus 263 ---d---~~ty~~LI~a~~~~g-------~~~~A~~lf~~m~~~-~~~p~-~~tl~~~l~~~~~~~~~~-~~~~l~~~~~ 326 (902)
+ ...|...|.---..+ ..+.+..+|++.... +..|+ |..+...+...+....+. .+..
T Consensus 295 ~~~~~~ql~lW~~yi~fEk~~~~~l~~~~~~~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~------ 368 (679)
T 4e6h_A 295 NEYDVQQLLIWLEWIRWESDNKLELSDDLHKARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLK------ 368 (679)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHH------
T ss_pred chhHHHHHHHHHHHHHHHHhCCccccchhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHH------
Confidence 0 234555444322222 122344556654332 22222 444444444444433221 2211
Q ss_pred hhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHcCCC------------CC------------cccHH
Q psy767 327 ICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS------------LV------------NGDYL 382 (902)
Q Consensus 327 ~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m~~~------------~~------------~~~~~ 382 (902)
... .-++.+...|-..+..+.+.|+++.|..+|++.-.. |. ...|.
T Consensus 369 ---------rAi-~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi 438 (679)
T 4e6h_A 369 ---------LGQ-QCIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYC 438 (679)
T ss_dssp ---------HHH-HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred ---------HHH-HhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHH
Confidence 111 123446677888888999999999999999874321 21 11277
Q ss_pred HHHHHHHHcCChHHHHHHHHHcccC-CCCCCCHHH-HHHHHHHc-CCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhh
Q psy767 383 DIIHALAVSGHGEYIDEIISKIQPG-VGYSADAAN-HIYHLINK-GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMV 459 (902)
Q Consensus 383 ~li~~~~~~g~~~~A~~l~~~m~~~-~g~~pd~~t-~i~~l~~~-g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~ 459 (902)
..+....+.|..+.|..+|.+.... ....+..+. +...-.+. ++++.|..+|+...+.++-.+.
T Consensus 439 ~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~------------- 505 (679)
T 4e6h_A 439 VYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGE------------- 505 (679)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHH-------------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchH-------------
Confidence 7777778888999999999998763 122232222 11111233 4589999999998887433221
Q ss_pred hcCCCCCccccchHHHHHHHHhcCChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCC
Q psy767 460 KTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLH 539 (902)
Q Consensus 460 ~~~~~~~g~~~~~~~li~~~~k~g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~g~~ 539 (902)
.....+......|+.+.|..+|+........+......|...+..-.+.|. .+.+..+.++|.+. .
T Consensus 506 -----------~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~-~~~~~~v~~R~~~~--~ 571 (679)
T 4e6h_A 506 -----------YINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGS-LNSVRTLEKRFFEK--F 571 (679)
T ss_dssp -----------HHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHH--S
T ss_pred -----------HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHh--C
Confidence 011233445578999999999999887643222344688999999999999 89999999999885 5
Q ss_pred CChhhHHHHHHHh
Q psy767 540 PRAFNLAVLIKAH 552 (902)
Q Consensus 540 Pd~~t~~~ll~a~ 552 (902)
|+......+++-+
T Consensus 572 P~~~~~~~f~~ry 584 (679)
T 4e6h_A 572 PEVNKLEEFTNKY 584 (679)
T ss_dssp TTCCHHHHHHHHT
T ss_pred CCCcHHHHHHHHh
Confidence 7766666666554
No 68
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.75 E-value=1.5e-06 Score=93.19 Aligned_cols=202 Identities=9% Similarity=-0.011 Sum_probs=160.8
Q ss_pred CCCHHHHHHHHHHHH-------HCCCc-------hHHHHHHHHHHHCCCCC-CHHHHHHHHHhHHHHHHHHHcCCHHHHH
Q psy767 80 PLDISHYNALLRVYL-------DNEHT-------FSPTDFLAKLESQGIEP-NRVTYQQLISNSKLISKYCQDGNIEGAT 144 (902)
Q Consensus 80 ~pd~~~yn~li~~~~-------~~g~~-------~~A~~l~~~M~~~g~~p-d~~t~~~ll~~~~li~~~~~~g~~~~A~ 144 (902)
+-+...|..+...+. +.|++ ++|..+|++..+. +.| +...|..+ ...+.+.|++++|.
T Consensus 47 p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~-~~p~~~~~~~~~------~~~~~~~~~~~~A~ 119 (308)
T 2ond_A 47 GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAIST-LLKKNMLLYFAY------ADYEESRMKYEKVH 119 (308)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTT-TTTTCHHHHHHH------HHHHHHTTCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHH-hCcccHHHHHHH------HHHHHhcCCHHHHH
Confidence 346778888888776 45887 8999999999863 345 45678888 99999999999999
Q ss_pred HHHHHhhhCCCCCC-HH-HHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH-HcCChhHHHHHHHhcc
Q psy767 145 KILEFMRDKTFPIS-EG-VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA-KHGDMDSIKTKIPSLK 221 (902)
Q Consensus 145 ~l~~~m~~~~~~p~-~~-~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~-~~g~~~~a~~l~~~~~ 221 (902)
.+|+...+. .|+ .. .|..+...+.+.|++++|..+|++..+... ++...|........ ..|+.++|..+|+...
T Consensus 120 ~~~~~al~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p-~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al 196 (308)
T 2ond_A 120 SIYNRLLAI--EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDAR-TRHHVYVTAALMEYYCSKDKSVAFKIFELGL 196 (308)
T ss_dssp HHHHHHHTS--SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTT-CCTHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhc--cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 999999874 454 33 899999999999999999999999998642 34445544333322 3799999999999887
Q ss_pred cCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCC-CCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHhcc
Q psy767 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG-LEP--SAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292 (902)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g-~~p--d~~ty~~LI~a~~~~g~~~~A~~lf~~m~~ 292 (902)
...+ .+...+..+..++...|+++.|..+|++..... +.| ....|..++..+.+.|+.++|..+++++..
T Consensus 197 ~~~p-~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~ 269 (308)
T 2ond_A 197 KKYG-DIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFT 269 (308)
T ss_dssp HHHT-TCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HhCC-CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 6433 245566777777888999999999999999863 455 577899999999999999999999998654
No 69
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.73 E-value=2.2e-07 Score=106.35 Aligned_cols=217 Identities=11% Similarity=0.003 Sum_probs=172.5
Q ss_pred CHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHH
Q psy767 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM-ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI 217 (902)
Q Consensus 139 ~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~-~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~ 217 (902)
.++++...++...... +.+...|..+-..|...|++ ++|++.|++..+.. .-+...|..+..+|...|++++|...|
T Consensus 83 ~~~~al~~l~~~~~~~-~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~ 160 (474)
T 4abn_A 83 EMEKTLQQMEEVLGSA-QVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLE-PELVEAWNQLGEVYWKKGDVTSAHTCF 160 (474)
T ss_dssp HHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccC-chhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3667777777765543 45788899999999999999 99999999998874 225779999999999999999999999
Q ss_pred HhcccCCCccchhhHHHHHHHHHhc---------CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHc--------CCH
Q psy767 218 PSLKPQSELFLCFSFQLTNLLILVS---------SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH--------GDM 280 (902)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~---------g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~--------g~~ 280 (902)
+........ ...+..+..++... |++++|...|++..+.. +.+...|..+..+|... |++
T Consensus 161 ~~al~~~p~--~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~~~~g~~ 237 (474)
T 4abn_A 161 SGALTHCKN--KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMD-VLDGRSWYILGNAYLSLYFNTGQNPKIS 237 (474)
T ss_dssp HHHHTTCCC--HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHhhCCC--HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHhhccccchH
Confidence 999887644 46677777777778 99999999999998864 55688999999999999 999
Q ss_pred HHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcC
Q psy767 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360 (902)
Q Consensus 281 ~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g 360 (902)
++|++.|++.... .....-+...|..+..+|...|
T Consensus 238 ~~A~~~~~~al~~---------------------------------------------~p~~~~~~~~~~~lg~~~~~~g 272 (474)
T 4abn_A 238 QQALSAYAQAEKV---------------------------------------------DRKASSNPDLHLNRATLHKYEE 272 (474)
T ss_dssp HHHHHHHHHHHHH---------------------------------------------CGGGGGCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh---------------------------------------------CCCcccCHHHHHHHHHHHHHcC
Confidence 9999999873210 0000136788899999999999
Q ss_pred CHHHHHHHHHH-cCCCCCccc-HHHHHHHHHHcCChHHHHHHHHHcc
Q psy767 361 DMDSIRRLLAQ-NGSSLVNGD-YLDIIHALAVSGHGEYIDEIISKIQ 405 (902)
Q Consensus 361 ~~~~A~~~~~~-m~~~~~~~~-~~~li~~~~~~g~~~~A~~l~~~m~ 405 (902)
++++|...|++ +...|..+. +..+...+...|++++|++.+.++.
T Consensus 273 ~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi~~~~~~~ 319 (474)
T 4abn_A 273 SYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLESKGKTK 319 (474)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999987 344444443 7778888888888888887766553
No 70
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.72 E-value=1e-06 Score=86.08 Aligned_cols=163 Identities=15% Similarity=0.108 Sum_probs=115.0
Q ss_pred CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHH
Q psy767 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196 (902)
Q Consensus 117 d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t 196 (902)
+..+|..+ -..|.+.|++++|.+.|++..+.+ |-+..+|..+...|.+.|++++|+..+........ -+...
T Consensus 4 ~~~iy~~l------G~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~ 75 (184)
T 3vtx_A 4 TTTIYMDI------GDKKRTKGDFDGAIRAYKKVLKAD-PNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDT-TSAEA 75 (184)
T ss_dssp CHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CCHHH
T ss_pred HHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc-hhHHH
Confidence 45566666 777777778888877777776654 44667777777777777777777777777766532 24445
Q ss_pred HHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q psy767 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276 (902)
Q Consensus 197 y~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~ 276 (902)
+..+...+...++++.+...+.. ..... +.+...+..+...|.+
T Consensus 76 ~~~~~~~~~~~~~~~~a~~~~~~-----------------------------------a~~~~-~~~~~~~~~lg~~~~~ 119 (184)
T 3vtx_A 76 YYILGSANFMIDEKQAAIDALQR-----------------------------------AIALN-TVYADAYYKLGLVYDS 119 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH-----------------------------------HHHHC-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHH-----------------------------------HHHhC-ccchHHHHHHHHHHHH
Confidence 55555666666666655554443 33322 5567788899999999
Q ss_pred cCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHH
Q psy767 277 HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356 (902)
Q Consensus 277 ~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y 356 (902)
.|++++|++.|++... . -+-+..+|..+..+|
T Consensus 120 ~g~~~~A~~~~~~~l~-----------------------------------------------~-~p~~~~~~~~lg~~~ 151 (184)
T 3vtx_A 120 MGEHDKAIEAYEKTIS-----------------------------------------------I-KPGFIRAYQSIGLAY 151 (184)
T ss_dssp TTCHHHHHHHHHHHHH-----------------------------------------------H-CTTCHHHHHHHHHHH
T ss_pred hCCchhHHHHHHHHHH-----------------------------------------------h-cchhhhHHHHHHHHH
Confidence 9999999999987321 1 123567788888888
Q ss_pred HHcCCHHHHHHHHHH
Q psy767 357 AKHGDMDSIRRLLAQ 371 (902)
Q Consensus 357 ~~~g~~~~A~~~~~~ 371 (902)
.+.|++++|...|++
T Consensus 152 ~~~g~~~~A~~~~~~ 166 (184)
T 3vtx_A 152 EGKGLRDEAVKYFKK 166 (184)
T ss_dssp HHTTCHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHH
Confidence 888998888888876
No 71
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.72 E-value=4.1e-07 Score=88.26 Aligned_cols=163 Identities=12% Similarity=0.076 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHH
Q psy767 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163 (902)
Q Consensus 84 ~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn 163 (902)
..|..+...+...|++++|...|+++.+.. +.+..++..+ ...+...|++++|...++...+.. +.+...|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~ 80 (186)
T 3as5_A 9 VYYRDKGISHAKAGRYSQAVMLLEQVYDAD-AFDVDVALHL------GIAYVKTGAVDRGTELLERSLADA-PDNVKVAT 80 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTTTCCTT-SCCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-ccChHHHHHH------HHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHH
Confidence 345566666667777777777776665432 2245555555 666667777777777777665543 34556666
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcC
Q psy767 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243 (902)
Q Consensus 164 ~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 243 (902)
.+...+...|++++|.+.|+++.... ..+...+..+...+...|++++|...++
T Consensus 81 ~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~------------------------- 134 (186)
T 3as5_A 81 VLGLTYVQVQKYDLAVPLLIKVAEAN-PINFNVRFRLGVALDNLGRFDEAIDSFK------------------------- 134 (186)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHH-------------------------
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcC-cHhHHHHHHHHHHHHHcCcHHHHHHHHH-------------------------
Confidence 66677777777777777777666543 2345555556666666666665555444
Q ss_pred CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhc
Q psy767 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291 (902)
Q Consensus 244 ~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~ 291 (902)
+..... +.+..+|..+...|...|++++|...|++..
T Consensus 135 ----------~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~ 171 (186)
T 3as5_A 135 ----------IALGLR-PNEGKVHRAIAFSYEQMGRHEEALPHFKKAN 171 (186)
T ss_dssp ----------HHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ----------HHHhcC-ccchHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 443332 4456778888888888889988888888753
No 72
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.69 E-value=2.9e-07 Score=105.35 Aligned_cols=199 Identities=8% Similarity=-0.078 Sum_probs=168.7
Q ss_pred CCHHHHHHHHHHHHHCCCc-hHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCH
Q psy767 81 LDISHYNALLRVYLDNEHT-FSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISE 159 (902)
Q Consensus 81 pd~~~yn~li~~~~~~g~~-~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~ 159 (902)
.+...|..+...|...|++ ++|...|++..+... -+...|..+ ...|.+.|++++|...|+...+.+ |+.
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p-~~~~a~~~l------g~~~~~~g~~~~A~~~~~~al~~~--p~~ 170 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEP-ELVEAWNQL------GEVYWKKGDVTSAHTCFSGALTHC--KNK 170 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCT-TCHHHHHHH------HHHHHHHTCHHHHHHHHHHHHTTC--CCH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCC-CCHHHHHHH------HHHHHHcCCHHHHHHHHHHHHhhC--CCH
Confidence 4778899999999999999 999999999887542 257788888 999999999999999999988764 677
Q ss_pred HHHHHHHHHHHhC---------CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHc--------CChhHHHHHHHhccc
Q psy767 160 GVFNALIYGHSQA---------NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH--------GDMDSIKTKIPSLKP 222 (902)
Q Consensus 160 ~~yn~Li~~~~~~---------g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~--------g~~~~a~~l~~~~~~ 222 (902)
..|..+...|... |++++|+..|++..+.. .-+...|..+..+|... |++++|...|+....
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 249 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMD-VLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEK 249 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 8899999999999 99999999999998874 23577899999999988 999999999999887
Q ss_pred CCCc--cchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy767 223 QSEL--FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 223 ~~~~--~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m 290 (902)
.... .....+..+..++...|++++|...|++..+.. +.+...|..+...+...|++++|++.+.++
T Consensus 250 ~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p~~~~a~~~l~~~~~~lg~~~eAi~~~~~~ 318 (474)
T 4abn_A 250 VDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALD-PAWPEPQQREQQLLEFLSRLTSLLESKGKT 318 (474)
T ss_dssp HCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 6432 456677778888888999999999999988764 456778889999999999999999877654
No 73
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.62 E-value=6.6e-07 Score=86.78 Aligned_cols=165 Identities=12% Similarity=0.062 Sum_probs=138.9
Q ss_pred HHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHH
Q psy767 43 VLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ 122 (902)
Q Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~ 122 (902)
...+..+...+...|++++|...|+.+.. -.+.+...|..+...|...|++++|...++++.+.. +.+...+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~ 80 (186)
T 3as5_A 8 QVYYRDKGISHAKAGRYSQAVMLLEQVYD------ADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADA-PDNVKVAT 80 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTTTCC------TTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHH
T ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHH------hCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHH
Confidence 34455667777888999999999998886 233467889999999999999999999999988753 33667777
Q ss_pred HHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q psy767 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202 (902)
Q Consensus 123 ~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~ 202 (902)
.+ ...+...|++++|...|+.+.... +.+...|..+...+...|++++|...|++..... ..+..++..+..
T Consensus 81 ~~------a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~ 152 (186)
T 3as5_A 81 VL------GLTYVQVQKYDLAVPLLIKVAEAN-PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLR-PNEGKVHRAIAF 152 (186)
T ss_dssp HH------HHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred HH------HHHHHHhcCHHHHHHHHHHHHhcC-cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC-ccchHHHHHHHH
Confidence 77 889999999999999999988764 5677889999999999999999999999998874 336778889999
Q ss_pred HHHHcCChhHHHHHHHhccc
Q psy767 203 GYAKHGDMDSIKTKIPSLKP 222 (902)
Q Consensus 203 a~~~~g~~~~a~~l~~~~~~ 222 (902)
.+...|++++|...++....
T Consensus 153 ~~~~~~~~~~A~~~~~~~~~ 172 (186)
T 3as5_A 153 SYEQMGRHEEALPHFKKANE 172 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 99999999999988887654
No 74
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.61 E-value=1.7e-05 Score=87.11 Aligned_cols=273 Identities=12% Similarity=0.053 Sum_probs=160.6
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCC-H----HHHHHHHHHHHhCCCHHHHHHHHHHHHHCCC-CCCH----HHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPIS-E----GVFNALIYGHSQANDMASAEGILTMMSQAGL-EPSA----QTYTKL 200 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~-~----~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~-~pd~----~ty~~l 200 (902)
...+...|++++|...++...... +++ . .+++.+...+...|++++|...+++.....- .++. .++..+
T Consensus 21 a~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l 99 (373)
T 1hz4_A 21 AQVAINDGNPDEAERLAKLALEEL-PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQ 99 (373)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTC-CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHcC-CCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 445567899999999998876643 222 2 2466677788889999999999988754310 1122 234556
Q ss_pred HHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCC--C-CHHHHHHHHHHHHHc
Q psy767 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE--P-SAQTYTKLMCGYAKH 277 (902)
Q Consensus 201 l~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~--p-d~~ty~~LI~a~~~~ 277 (902)
...+...|++++|...++.... +.. ..+.. | ...++..+...|...
T Consensus 100 a~~~~~~G~~~~A~~~~~~al~----------------------------~~~---~~~~~~~~~~~~~~~~la~~~~~~ 148 (373)
T 1hz4_A 100 SEILFAQGFLQTAWETQEKAFQ----------------------------LIN---EQHLEQLPMHEFLVRIRAQLLWAW 148 (373)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH----------------------------HHH---HTTCTTSTHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCCHHHHHHHHHHHHH----------------------------HHH---HhccccCcHHHHHHHHHHHHHHHh
Confidence 6667777777777766654322 111 11211 2 234556667777888
Q ss_pred CCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHH
Q psy767 278 GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357 (902)
Q Consensus 278 g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~ 357 (902)
|++++|...+++.... ....+......+|..+...+.
T Consensus 149 g~~~~A~~~~~~al~~-------------------------------------------~~~~~~~~~~~~~~~la~~~~ 185 (373)
T 1hz4_A 149 ARLDEAEASARSGIEV-------------------------------------------LSSYQPQQQLQCLAMLIQCSL 185 (373)
T ss_dssp TCHHHHHHHHHHHHHH-------------------------------------------TTTSCGGGGHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH-------------------------------------------hhccCcHHHHHHHHHHHHHHH
Confidence 8888888888763211 011111112356667777888
Q ss_pred HcCCHHHHHHHHHHc----CCCCCcccHHH-----HHHHHHHcCChHHHHHHHHHcccCCCCCCCH------HHHHHHHH
Q psy767 358 KHGDMDSIRRLLAQN----GSSLVNGDYLD-----IIHALAVSGHGEYIDEIISKIQPGVGYSADA------ANHIYHLI 422 (902)
Q Consensus 358 ~~g~~~~A~~~~~~m----~~~~~~~~~~~-----li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~------~t~i~~l~ 422 (902)
..|++++|...+++. ...+....|.. .+..+...|++++|.+.+++... ....+.. ..+...+.
T Consensus 186 ~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~-~~~~~~~~~~~~~~~la~~~~ 264 (373)
T 1hz4_A 186 ARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAK-PEFANNHFLQGQWRNIARAQI 264 (373)
T ss_dssp HHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCC-CCCTTCGGGHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCC-CCCCcchhhHHHHHHHHHHHH
Confidence 888888888888762 22212122322 23346688888888888888776 2211111 12344566
Q ss_pred HcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCcccc-chHHHHHHHHhcCChHHHHHHHHHHHHc
Q psy767 423 NKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSA-DAANHIYHLINKGQIDAAYRIVNTLARS 498 (902)
Q Consensus 423 ~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~li~~~~k~g~~~~A~~l~~~m~~~ 498 (902)
..|++++|...++.......-.+... ... ....+...+...|+.++|...++.....
T Consensus 265 ~~g~~~~A~~~l~~a~~~~~~~~~~~-------------------~~~~~~~~la~~~~~~g~~~~A~~~l~~al~~ 322 (373)
T 1hz4_A 265 LLGEFEPAEIVLEELNENARSLRLMS-------------------DLNRNLLLLNQLYWQAGRKSDAQRVLLDALKL 322 (373)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHH-------------------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhCcchh-------------------hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 88889988888887765321111000 000 0112334477888888888888776654
No 75
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.59 E-value=9.5e-06 Score=89.18 Aligned_cols=197 Identities=9% Similarity=-0.087 Sum_probs=123.2
Q ss_pred HHHHHHHHCCCchHHHHHHHHHHHCCCCCCHH----HHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhh----CCCCC-C
Q psy767 88 ALLRVYLDNEHTFSPTDFLAKLESQGIEPNRV----TYQQLISNSKLISKYCQDGNIEGATKILEFMRD----KTFPI-S 158 (902)
Q Consensus 88 ~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~----t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~----~~~~p-~ 158 (902)
.....+...|++++|...+++........+.. +++.+ ...+...|++++|...+++... .+... .
T Consensus 19 ~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l------~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 92 (373)
T 1hz4_A 19 LRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVL------GEVLHCKGELTRSLALMQQTEQMARQHDVWHYA 92 (373)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHH------HHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 34445667999999999999988754322332 23334 6778889999999999988653 22110 1
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHC----CCC--CC-HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCc----c
Q psy767 159 EGVFNALIYGHSQANDMASAEGILTMMSQA----GLE--PS-AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL----F 227 (902)
Q Consensus 159 ~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~----g~~--pd-~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~----~ 227 (902)
..+++.+...+...|++++|...|++.... |.. |. ..++..+...+...|++++|...++........ .
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 172 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ 172 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH
Confidence 234667788899999999999999987653 222 32 345666778889999999999888776542211 1
Q ss_pred chhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC-HHHHH-----HHHHHHHHcCCHHHHHHHHHHh
Q psy767 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS-AQTYT-----KLMCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 228 ~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd-~~ty~-----~LI~a~~~~g~~~~A~~lf~~m 290 (902)
....+..+..++...|++++|...+++.....-.++ ...|. ..+..+...|++++|...+++.
T Consensus 173 ~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 241 (373)
T 1hz4_A 173 QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHT 241 (373)
T ss_dssp GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhC
Confidence 123344445555566777777777766554211111 01111 1223355666666666666653
No 76
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.59 E-value=3.5e-06 Score=93.09 Aligned_cols=230 Identities=8% Similarity=-0.011 Sum_probs=136.5
Q ss_pred HHHHcCCHHHHHHHHHHhhhCC--CC---CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC----C-CCC-CHHHHHHHH
Q psy767 133 KYCQDGNIEGATKILEFMRDKT--FP---ISEGVFNALIYGHSQANDMASAEGILTMMSQA----G-LEP-SAQTYTKLM 201 (902)
Q Consensus 133 ~~~~~g~~~~A~~l~~~m~~~~--~~---p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~----g-~~p-d~~ty~~ll 201 (902)
.+...|++++|...|+.....- ++ ....+|..+...|...|+++.|+..+++..+. + ..+ ...+++.+.
T Consensus 110 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg 189 (378)
T 3q15_A 110 YEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIA 189 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence 3456777777777777765421 11 12345667777777777777777777766542 1 011 134566677
Q ss_pred HHHHHcCChhHHHHHHHhcccC----C-CccchhhHHHHHHHHHhcCCHHHHHHHHHHHHH-----CCCCCCHHHHHHHH
Q psy767 202 CGYAKHGDMDSIKTKIPSLKPQ----S-ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ-----AGLEPSAQTYTKLM 271 (902)
Q Consensus 202 ~a~~~~g~~~~a~~l~~~~~~~----~-~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~-----~g~~pd~~ty~~LI 271 (902)
..|...|++++|...+...... + .......+..+..++...|+++.|...+++... .. +....++..+.
T Consensus 190 ~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~la 268 (378)
T 3q15_A 190 GNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVP-DLLPKVLFGLS 268 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCG-GGHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCC-hhHHHHHHHHH
Confidence 7777777777777777665442 1 111223444555566667777777777777665 32 22356677777
Q ss_pred HHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHH
Q psy767 272 CGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351 (902)
Q Consensus 272 ~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~ 351 (902)
..|.+.|++++|...|++.... ....+-......+..
T Consensus 269 ~~~~~~g~~~~A~~~~~~al~~-------------------------------------------~~~~~~~~~~~~~~~ 305 (378)
T 3q15_A 269 WTLCKAGQTQKAFQFIEEGLDH-------------------------------------------ITARSHKFYKELFLF 305 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH-------------------------------------------CCTTCCSCHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHH-------------------------------------------HHHcCCHHHHHHHHH
Confidence 7777777777777777763211 011111222334555
Q ss_pred HHHHHHHcCC---HHHHHHHHHHcCCCCCccc-HHHHHHHHHHcCChHHHHHHHHHccc
Q psy767 352 LMCGYAKHGD---MDSIRRLLAQNGSSLVNGD-YLDIIHALAVSGHGEYIDEIISKIQP 406 (902)
Q Consensus 352 Li~~y~~~g~---~~~A~~~~~~m~~~~~~~~-~~~li~~~~~~g~~~~A~~l~~~m~~ 406 (902)
+-..|...|+ +++|+..+++....+.... +..+...|...|++++|.+.|++..+
T Consensus 306 l~~ly~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~ 364 (378)
T 3q15_A 306 LQAVYKETVDERKIHDLLSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLK 364 (378)
T ss_dssp HHHHHSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 5566666777 7777777777433222222 45677777778888877777776543
No 77
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.55 E-value=1.3e-06 Score=99.31 Aligned_cols=305 Identities=11% Similarity=0.032 Sum_probs=166.6
Q ss_pred HHHCCCc---hHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcC-----CHHHHHHHHHHhhhCCCCCCHHHHHH
Q psy767 93 YLDNEHT---FSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG-----NIEGATKILEFMRDKTFPISEGVFNA 164 (902)
Q Consensus 93 ~~~~g~~---~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g-----~~~~A~~l~~~m~~~~~~p~~~~yn~ 164 (902)
|...|++ ++|...|++..+. +...+..+ -..+...| ++++|...|+...+.|.+ ..+..
T Consensus 45 y~~~g~~~d~~~A~~~~~~A~~~----~~~A~~~L------g~~~~~~~~~~~~~~~~A~~~~~~Aa~~g~~---~A~~~ 111 (452)
T 3e4b_A 45 QVGTRDPAQIKQAEATYRAAADT----SPRAQARL------GRLLAAKPGATEAEHHEAESLLKKAFANGEG---NTLIP 111 (452)
T ss_dssp ------------------------------CHHHH------HHHHHTC--CCHHHHHHHHHHHHHHHHTTCS---SCHHH
T ss_pred HHccCCCCCHHHHHHHHHHHHhC----CHHHHHHH------HHHHHhCCCCCCcCHHHHHHHHHHHHHCCCH---HHHHH
Confidence 3444555 7788888777643 33334444 44344444 677888888887776632 36666
Q ss_pred HHHHHHhCCCH---HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhH----HHHHHHhcccCCCccchhhHHHHHH
Q psy767 165 LIYGHSQANDM---ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS----IKTKIPSLKPQSELFLCFSFQLTNL 237 (902)
Q Consensus 165 Li~~~~~~g~~---~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~----a~~l~~~~~~~~~~~~~~~~~~~~~ 237 (902)
|-..|...+.. .++.+.+......| +...+..|...|...+.+++ +..++...... ++..+..+..
T Consensus 112 Lg~~y~~~~~~~~~~~a~~~~~~a~~~g---~~~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a~~~----~~~a~~~Lg~ 184 (452)
T 3e4b_A 112 LAMLYLQYPHSFPNVNAQQQISQWQAAG---YPEAGLAQVLLYRTQGTYDQHLDDVERICKAALNT----TDICYVELAT 184 (452)
T ss_dssp HHHHHHHCGGGCTTCCHHHHHHHHHHHT---CTTHHHHHHHHHHHHTCGGGGHHHHHHHHHHHTTT----CTTHHHHHHH
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHcC----CHHHHHHHHH
Confidence 66777665543 33455555555544 23455556666666664444 33344443332 2225566666
Q ss_pred HHHhcC---CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcC
Q psy767 238 LILVSS---DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH----GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310 (902)
Q Consensus 238 ~~~~~g---~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~----g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~ 310 (902)
++...| +.++|...|+.....| .++...+..|-..|... +++++|+++|++.. .+
T Consensus 185 ~~~~~g~~~~~~~A~~~~~~aa~~g-~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g---------------- 246 (452)
T 3e4b_A 185 VYQKKQQPEQQAELLKQMEAGVSRG-TVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PG---------------- 246 (452)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTT-CSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GG----------------
T ss_pred HHHHcCCcccHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CC----------------
Confidence 666677 8888888888888887 56666666666666554 68889999988743 11
Q ss_pred CcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHH-H--HHcCCHHHHHHHHHHcCCCCCcccHHHHHHH
Q psy767 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCG-Y--AKHGDMDSIRRLLAQNGSSLVNGDYLDIIHA 387 (902)
Q Consensus 311 ~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~-y--~~~g~~~~A~~~~~~m~~~~~~~~~~~li~~ 387 (902)
+...+..|-.. | ...+++++|...|++--..+....+..+...
T Consensus 247 ----------------------------------~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~ 292 (452)
T 3e4b_A 247 ----------------------------------YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAADQPRAELLLGKL 292 (452)
T ss_dssp ----------------------------------STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ----------------------------------CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 23334444444 2 3467788888888775444444446666666
Q ss_pred HHHcC-----ChHHHHHHHHHcccCCCCCCCHHHHHHHHHHcC-----CHHHHHHHHHHHHhccCCCCCcccchhhHHHh
Q psy767 388 LAVSG-----HGEYIDEIISKIQPGVGYSADAANHIYHLINKG-----QIDAAYRIVNTLARSANINGEQLPVGGFLVRH 457 (902)
Q Consensus 388 ~~~~g-----~~~~A~~l~~~m~~~~g~~pd~~t~i~~l~~~g-----~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~ 457 (902)
|. .| ++++|.+.|++.. . -.|+....+..+...| +.++|..+|++..+...
T Consensus 293 y~-~G~g~~~d~~~A~~~~~~Aa--~-g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~--------------- 353 (452)
T 3e4b_A 293 YY-EGKWVPADAKAAEAHFEKAV--G-REVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQ--------------- 353 (452)
T ss_dssp HH-HCSSSCCCHHHHHHHHHTTT--T-TCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTC---------------
T ss_pred HH-cCCCCCCCHHHHHHHHHHHh--C-CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhCh---------------
Confidence 65 45 7788888887765 2 2222222233333334 78888888887765321
Q ss_pred hhhcCCCCCccccchHHHHHHHHh----cCChHHHHHHHHHHHHcc
Q psy767 458 MVKTNQPGVGYSADAANHIYHLIN----KGQIDAAYRIVNTLARSA 499 (902)
Q Consensus 458 ~~~~~~~~~g~~~~~~~li~~~~k----~g~~~~A~~l~~~m~~~~ 499 (902)
....+++-.+|.. ..+.++|..+|+.....+
T Consensus 354 -----------~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~g 388 (452)
T 3e4b_A 354 -----------NSADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQD 388 (452)
T ss_dssp -----------TTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHHTTC
T ss_pred -----------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHCC
Confidence 1123444444442 347888888888877654
No 78
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.55 E-value=7.3e-06 Score=90.48 Aligned_cols=312 Identities=12% Similarity=0.053 Sum_probs=188.1
Q ss_pred CCCHHHHHHHHHHH--HhCCCHHHHHHHHHHHHHC--CCCCCH--HHHHHHHHHH--HHcCChhHHH---------HHHH
Q psy767 156 PISEGVFNALIYGH--SQANDMASAEGILTMMSQA--GLEPSA--QTYTKLMCGY--AKHGDMDSIK---------TKIP 218 (902)
Q Consensus 156 ~p~~~~yn~Li~~~--~~~g~~~~A~~l~~~M~~~--g~~pd~--~ty~~ll~a~--~~~g~~~~a~---------~l~~ 218 (902)
.|+..+-+.|-..| .+.+++++|..++++.... .+..|. ..|-.++..- .-.+....+. ..++
T Consensus 7 ~~~~~v~~~l~~wy~~i~~~~~~~A~~l~~~i~~~~~~~~~~~~~~~yy~l~~~r~~~~~~~~~~~~~~~~~~~~~~~l~ 86 (378)
T 3q15_A 7 IPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGKTYGNRPTVTELLE 86 (378)
T ss_dssp BCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGBCCCHHHHHHHHHHHHHHHHHHHTCCC--------CHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcCcccccccccchHHHHH
Confidence 34444444455455 6677777777777776542 222232 2333333321 1112222222 4444
Q ss_pred hcccCCCccch----hhHHHHHHHHHhcCCHHHHHHHHHHHHHCCC-CCC----HHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 219 SLKPQSELFLC----FSFQLTNLLILVSSDMASAEGILTMMSQAGL-EPS----AQTYTKLMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 219 ~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~-~pd----~~ty~~LI~a~~~~g~~~~A~~lf~~ 289 (902)
.+.......+. ..+......+...|+++.|...|++....-- .++ ..+|..+...|...|++++|...+.+
T Consensus 87 ~i~~~~~~~~~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~ 166 (378)
T 3q15_A 87 TIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQ 166 (378)
T ss_dssp HHHGGGHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHhccCCCCccHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 44332111111 0122233334568999999999998875321 122 45788888999999999999999987
Q ss_pred hccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCC-CC-CHHHHHHHHHHHHHcCCHHHHHH
Q psy767 290 SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL-EP-SAQTYTKLMCGYAKHGDMDSIRR 367 (902)
Q Consensus 290 m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~-~p-~~~t~~~Li~~y~~~g~~~~A~~ 367 (902)
.... ....+- .+ ...+++.+..+|...|++++|..
T Consensus 167 al~~-------------------------------------------~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~ 203 (378)
T 3q15_A 167 ALDI-------------------------------------------YQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALP 203 (378)
T ss_dssp HHHH-------------------------------------------HHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHH-------------------------------------------HHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHH
Confidence 3210 111111 11 24678889999999999999999
Q ss_pred HHHHc----CCCCCcc----cHHHHHHHHHHcCChHHHHHHHHHcccCC--CCCCCHHH----HHHHHHHcCCHHHHHHH
Q psy767 368 LLAQN----GSSLVNG----DYLDIIHALAVSGHGEYIDEIISKIQPGV--GYSADAAN----HIYHLINKGQIDAAYRI 433 (902)
Q Consensus 368 ~~~~m----~~~~~~~----~~~~li~~~~~~g~~~~A~~l~~~m~~~~--g~~pd~~t----~i~~l~~~g~~~~A~~~ 433 (902)
.|.+. ...+... .+..+...|...|++++|.+.|++..... .-.|.... +-..+.+.|++++|...
T Consensus 204 ~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 283 (378)
T 3q15_A 204 HLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQF 283 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 98872 1111221 26778899999999999999999876510 02233322 34456799999999999
Q ss_pred HHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHH-HHHhcCC---hHHHHHHHHHHHHccCCCCCccchH
Q psy767 434 VNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIY-HLINKGQ---IDAAYRIVNTLARSANINGEQLPVG 509 (902)
Q Consensus 434 ~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~-~~~k~g~---~~~A~~l~~~m~~~~~~~~~~~~~~ 509 (902)
+++..+.....+... +. ..+..+. .|...|+ +.+|..+++..... +.....+
T Consensus 284 ~~~al~~~~~~~~~~-------------------~~-~~~~~l~~ly~~~~~~~~~~~al~~~~~~~~~----~~~~~~~ 339 (378)
T 3q15_A 284 IEEGLDHITARSHKF-------------------YK-ELFLFLQAVYKETVDERKIHDLLSYFEKKNLH----AYIEACA 339 (378)
T ss_dssp HHHHHHHCCTTCCSC-------------------HH-HHHHHHHHHHSSSCCHHHHHHHHHHHHHTTCH----HHHHHHH
T ss_pred HHHHHHHHHHcCCHH-------------------HH-HHHHHHHHHHhCCCcHHHHHHHHHHHHhCCCh----hHHHHHH
Confidence 999887543322211 11 1223333 3556677 78888887763221 1123466
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy767 510 GFLVRHMVKTNQPIDKVLAVCHRLTD 535 (902)
Q Consensus 510 n~li~~~~~~g~~~~~A~~l~~~m~~ 535 (902)
..+...|...|+ .++|...|++..+
T Consensus 340 ~~la~~y~~~g~-~~~A~~~~~~al~ 364 (378)
T 3q15_A 340 RSAAAVFESSCH-FEQAAAFYRKVLK 364 (378)
T ss_dssp HHHHHHHHHTTC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCC-HHHHHHHHHHHHH
Confidence 788999999999 9999999998654
No 79
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.54 E-value=1.9e-06 Score=95.44 Aligned_cols=227 Identities=9% Similarity=-0.031 Sum_probs=168.3
Q ss_pred HHHHHHHCCCchHHHHHHHHHHHCC-CCCC----HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhC----C--CCC
Q psy767 89 LLRVYLDNEHTFSPTDFLAKLESQG-IEPN----RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK----T--FPI 157 (902)
Q Consensus 89 li~~~~~~g~~~~A~~l~~~M~~~g-~~pd----~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~----~--~~p 157 (902)
....+...|++++|...|++..+.- -.+| ..+|..+ ...|...|+++.|...++...+. + .+.
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~l------g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 182 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKM------SESYYYMKQTYFSMDYARQAYEIYKEHEAYNIR 182 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHHHHhCccchHH
Confidence 4455778999999999999987631 1123 3456666 88899999999999999886542 1 111
Q ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCC-CCC----HHHHHHHHHHHHHcCChhHHHHHHHhccc-----CCCcc
Q psy767 158 SEGVFNALIYGHSQANDMASAEGILTMMSQAGL-EPS----AQTYTKLMCGYAKHGDMDSIKTKIPSLKP-----QSELF 227 (902)
Q Consensus 158 ~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~-~pd----~~ty~~ll~a~~~~g~~~~a~~l~~~~~~-----~~~~~ 227 (902)
...+++.+-..|...|++++|+..|++..+..- .++ ..++..+...|...|++++|...+++... .....
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~ 262 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPS 262 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchh
Confidence 235788899999999999999999998865311 112 24788899999999999999999988876 33244
Q ss_pred chhhHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHhccCCCCCCHH
Q psy767 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQA----GLEPSAQTYTKLMCGYAKHGD---MDSVRRLLAQSGSSLVNGDYL 300 (902)
Q Consensus 228 ~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~----g~~pd~~ty~~LI~a~~~~g~---~~~A~~lf~~m~~~~~~p~~~ 300 (902)
....+..+..++...|++++|...+++.... +-+.....++.+-..|...|+ +++|+.++++.
T Consensus 263 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~---------- 332 (383)
T 3ulq_A 263 LPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESK---------- 332 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHT----------
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC----------
Confidence 5667777888888999999999999987653 112223345667778888888 77777777752
Q ss_pred HHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP-SAQTYTKLMCGYAKHGDMDSIRRLLAQ 371 (902)
Q Consensus 301 tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p-~~~t~~~Li~~y~~~g~~~~A~~~~~~ 371 (902)
+..| ...++..+...|...|++++|...|++
T Consensus 333 ----------------------------------------~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~ 364 (383)
T 3ulq_A 333 ----------------------------------------MLYADLEDFAIDVAKYYHERKNFQKASAYFLK 364 (383)
T ss_dssp ----------------------------------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ----------------------------------------cCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 1112 234667788999999999999999986
No 80
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.52 E-value=9.4e-07 Score=92.31 Aligned_cols=166 Identities=14% Similarity=0.071 Sum_probs=93.8
Q ss_pred HCCCchHHHHHHHHHHHCC---CCCC-HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhC------C-CCCCHHHHH
Q psy767 95 DNEHTFSPTDFLAKLESQG---IEPN-RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK------T-FPISEGVFN 163 (902)
Q Consensus 95 ~~g~~~~A~~l~~~M~~~g---~~pd-~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~------~-~~p~~~~yn 163 (902)
..|++++|..+|++..+.- ..++ ......+ ..+...|...|++++|...|+..... + -+....+|+
T Consensus 13 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~---~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 89 (283)
T 3edt_B 13 GLVPRGSAVPLCKQALEDLEKTSGHDHPDVATML---NILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLN 89 (283)
T ss_dssp CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHH---HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH---HHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 4567777777777655421 1112 2222222 34455566667777777777665432 1 122345566
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHC------CCCC-CHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHH
Q psy767 164 ALIYGHSQANDMASAEGILTMMSQA------GLEP-SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236 (902)
Q Consensus 164 ~Li~~~~~~g~~~~A~~l~~~M~~~------g~~p-d~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 236 (902)
.+...|...|++++|+..|++.... .-.| ...+|..+...|...|++++|...++....
T Consensus 90 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~-------------- 155 (283)
T 3edt_B 90 NLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALE-------------- 155 (283)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH--------------
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--------------
Confidence 6667777777777777777666543 1011 233455555556666666655555543221
Q ss_pred HHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhc
Q psy767 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291 (902)
Q Consensus 237 ~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~ 291 (902)
++........+....++..+...|...|++++|...|++..
T Consensus 156 --------------~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l 196 (283)
T 3edt_B 156 --------------IYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEIL 196 (283)
T ss_dssp --------------HHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred --------------HHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 22211111112235678889999999999999999999854
No 81
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.52 E-value=5.2e-07 Score=94.29 Aligned_cols=236 Identities=11% Similarity=0.060 Sum_probs=143.6
Q ss_pred cccCCCCCCcCcccccCccccccCCCCCC-CCHHHHHHHHHHHHHCCCc-hHHHHHHHHHHHCC---C-CCCHHHHHHHH
Q psy767 52 KWCSEPSLGPGNLPCEDPFSVHTGELDVP-LDISHYNALLRVYLDNEHT-FSPTDFLAKLESQG---I-EPNRVTYQQLI 125 (902)
Q Consensus 52 ~~~~~g~~~~A~~~f~~~~~~~~~~~g~~-pd~~~yn~li~~~~~~g~~-~~A~~l~~~M~~~g---~-~pd~~t~~~ll 125 (902)
.....|+++.|...|++......+..+.. |+....-..+..+.....- ++|...|++..+.. . ..+......
T Consensus 10 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~-- 87 (283)
T 3edt_B 10 HSSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAAT-- 87 (283)
T ss_dssp ---CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHH--
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHH--
Confidence 45677889999999988887433222222 2222222223333333333 35888888876531 1 212332222
Q ss_pred HhHHHHHHHHHcCCHHHHHHHHHHhhhC------C-CCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC------CCCC
Q psy767 126 SNSKLISKYCQDGNIEGATKILEFMRDK------T-FPISEGVFNALIYGHSQANDMASAEGILTMMSQA------GLEP 192 (902)
Q Consensus 126 ~~~~li~~~~~~g~~~~A~~l~~~m~~~------~-~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~------g~~p 192 (902)
...+...|...|++++|...|+..... . .+....+|..+...|...|++++|+.+|++..+. +-.|
T Consensus 88 -~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 166 (283)
T 3edt_B 88 -LNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDP 166 (283)
T ss_dssp -HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCH
T ss_pred -HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCH
Confidence 356677888999999999999987653 1 2334677899999999999999999999999765 1123
Q ss_pred -CHHHHHHHHHHHHHcCChhHHHHHHHhcccC-------CCcc-chhhHHHHHHHHHhc------CCHHHHHHHHHHHHH
Q psy767 193 -SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ-------SELF-LCFSFQLTNLLILVS------SDMASAEGILTMMSQ 257 (902)
Q Consensus 193 -d~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~-------~~~~-~~~~~~~~~~~~~~~------g~~~~A~~l~~~m~~ 257 (902)
...++..+...|...|++++|...++..... ...+ ....+.......... ..+..+...+.....
T Consensus 167 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (283)
T 3edt_B 167 NVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKV 246 (283)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCC
Confidence 3457888999999999999999999988652 1111 111222222222221 122222222222111
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhc
Q psy767 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291 (902)
Q Consensus 258 ~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~ 291 (902)
..+....+|..+...|...|++++|..+|++..
T Consensus 247 -~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 279 (283)
T 3edt_B 247 -DSPTVNTTLRSLGALYRRQGKLEAAHTLEDCAS 279 (283)
T ss_dssp -CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 112235578889999999999999999998754
No 82
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.50 E-value=2e-06 Score=102.74 Aligned_cols=164 Identities=12% Similarity=0.033 Sum_probs=127.6
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV 161 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~ 161 (902)
+...|+.+-..|.+.|++++|++.|++..+.... +...|..+ -.+|.+.|++++|...|++..+.+ +-+...
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nL------g~~l~~~g~~~eA~~~~~~Al~l~-P~~~~a 79 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNL------ASVLQQQGKLQEALMHYKEAIRIS-PTFADA 79 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-CCCHHH
Confidence 4567888999999999999999999988865321 46777778 888889999999999998887764 446788
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHh
Q psy767 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241 (902)
Q Consensus 162 yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (902)
|+.+-.+|.+.|++++|++.|++..+.. .-+...|..+..+|...|++++|...|++..+
T Consensus 80 ~~nLg~~l~~~g~~~~A~~~~~kAl~l~-P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~------------------- 139 (723)
T 4gyw_A 80 YSNMGNTLKEMQDVQGALQCYTRAIQIN-PAFADAHSNLASIHKDSGNIPEAIASYRTALK------------------- 139 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-------------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------------------
Confidence 8889999999999999999998888763 12456788888888888888877766665443
Q ss_pred cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy767 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 242 ~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m 290 (902)
.. +-+...|..+...|...|++++|.+.|++.
T Consensus 140 ----------------l~-P~~~~a~~~L~~~l~~~g~~~~A~~~~~ka 171 (723)
T 4gyw_A 140 ----------------LK-PDFPDAYCNLAHCLQIVCDWTDYDERMKKL 171 (723)
T ss_dssp ----------------HC-SCCHHHHHHHHHHHHHTTCCTTHHHHHHHH
T ss_pred ----------------hC-CCChHHHhhhhhHHHhcccHHHHHHHHHHH
Confidence 21 345677888888888888888888888764
No 83
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.48 E-value=3.8e-06 Score=76.30 Aligned_cols=129 Identities=16% Similarity=0.141 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHH
Q psy767 85 HYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164 (902)
Q Consensus 85 ~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~ 164 (902)
.|..+...|...|++++|..+|+++.+... .+...+..+ ...+...|++++|..+|+.+...+ +.+...|..
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~~------a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~ 74 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDP-RSAEAWYNL------GNAYYKQGDYDEAIEYYQKALELD-PRSAEAWYN 74 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-TCHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCC-cchhHHHHH------HHHHHHhcCHHHHHHHHHHHHHHC-CCchHHHHH
Confidence 577788888889999999999998876542 356677777 888888999999999999887764 456778888
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhccc
Q psy767 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKP 222 (902)
Q Consensus 165 Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~ 222 (902)
+...+...|++++|.++|+++.... ..+..++..+...+...|++++|...++.+..
T Consensus 75 l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 131 (136)
T 2fo7_A 75 LGNAYYKQGDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 131 (136)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence 8889999999999999999888764 23567777888888888888888777776543
No 84
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.48 E-value=1.7e-05 Score=80.28 Aligned_cols=197 Identities=9% Similarity=-0.024 Sum_probs=145.6
Q ss_pred CCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHH
Q psy767 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG 160 (902)
Q Consensus 81 pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~ 160 (902)
.|...|......+...|++++|...|++..+....++...+..+ ..++.+.|++++|...|+...+.+ +-+..
T Consensus 5 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~------~~~~~~~~~~~~A~~~~~~al~~~-p~~~~ 77 (228)
T 4i17_A 5 TDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNC------GVCADNIKKYKEAADYFDIAIKKN-YNLAN 77 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHTT-CSHHH
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHH------HHHHHHhhcHHHHHHHHHHHHHhC-cchHH
Confidence 46688889999999999999999999999887654677777778 889999999999999999988765 45678
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCH-------HHHHHHHHHHHHcCChhHHHHHHHhcccCCCcc-chhhH
Q psy767 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSA-------QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF-LCFSF 232 (902)
Q Consensus 161 ~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~-------~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~-~~~~~ 232 (902)
.|..+...|...|++++|+..|++..+... .+. ..|..+-..+...|++++|...|+......+.. ....+
T Consensus 78 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 156 (228)
T 4i17_A 78 AYIGKSAAYRDMKNNQEYIATLTEGIKAVP-GNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDAL 156 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHCC-CcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHH
Confidence 899999999999999999999999988632 234 457777888889999999999999988764330 22333
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccC
Q psy767 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293 (902)
Q Consensus 233 ~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~ 293 (902)
..+..++.. .+..+++.+...+ ..+...|.... ....+.+++|+..|++....
T Consensus 157 ~~l~~~~~~-----~~~~~~~~a~~~~-~~~~~~~~~~~--~~~~~~~~~A~~~~~~a~~l 209 (228)
T 4i17_A 157 YSLGVLFYN-----NGADVLRKATPLA-SSNKEKYASEK--AKADAAFKKAVDYLGEAVTL 209 (228)
T ss_dssp HHHHHHHHH-----HHHHHHHHHGGGT-TTCHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-----HHHHHHHHHHhcc-cCCHHHHHHHH--HHHHHHHHHHHHHHHHHhhc
Confidence 334444432 3334445554443 33344444443 23445678999999886553
No 85
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.47 E-value=5.7e-06 Score=83.94 Aligned_cols=195 Identities=8% Similarity=-0.012 Sum_probs=122.7
Q ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHH
Q psy767 158 SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237 (902)
Q Consensus 158 ~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~ 237 (902)
|...|...-..+.+.|++++|+..|++..+....++...+..+..++...|++++|...++......
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~------------- 72 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKN------------- 72 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-------------
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC-------------
Confidence 4567777778888888888888888888776533677777777777777777776666665544321
Q ss_pred HHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHH
Q psy767 238 LILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317 (902)
Q Consensus 238 ~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~ 317 (902)
+.+..+|..+...|...|++++|+..|++....
T Consensus 73 -----------------------p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~------------------------ 105 (228)
T 4i17_A 73 -----------------------YNLANAYIGKSAAYRDMKNNQEYIATLTEGIKA------------------------ 105 (228)
T ss_dssp -----------------------CSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------------------
T ss_pred -----------------------cchHHHHHHHHHHHHHcccHHHHHHHHHHHHHH------------------------
Confidence 334567778888888889999999888873221
Q ss_pred HHHHHHHhhhhhcccccchHHhcCCCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCC--ccc-HHHHHHHH
Q psy767 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSA-----QTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLV--NGD-YLDIIHAL 388 (902)
Q Consensus 318 ~~~l~~~~~~~~~~~~~~~m~~~g~~p~~-----~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~--~~~-~~~li~~~ 388 (902)
..-.+.. .+|..+-..+...|++++|...|++. ...|. .+. |..+...|
T Consensus 106 ----------------------~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 163 (228)
T 4i17_A 106 ----------------------VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLF 163 (228)
T ss_dssp ----------------------STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred ----------------------CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHH
Confidence 1101111 45777778889999999999999984 44444 222 56666666
Q ss_pred HHcCChHHHHHHHHHcccCCCCCCCHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q psy767 389 AVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARS 440 (902)
Q Consensus 389 ~~~g~~~~A~~l~~~m~~~~g~~pd~~t~i~~l~~~g~~~~A~~~~~~m~~~ 440 (902)
...|+ .+++++.......+..+. -......+.+++|...+++..+.
T Consensus 164 ~~~~~-----~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~A~~~~~~a~~l 209 (228)
T 4i17_A 164 YNNGA-----DVLRKATPLASSNKEKYA-SEKAKADAAFKKAVDYLGEAVTL 209 (228)
T ss_dssp HHHHH-----HHHHHHGGGTTTCHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-----HHHHHHHhcccCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhc
Confidence 55443 334444441111111111 11122445567777777776654
No 86
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.40 E-value=6.6e-06 Score=74.66 Aligned_cols=123 Identities=20% Similarity=0.193 Sum_probs=90.7
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~ 210 (902)
...+...|++++|..+|+.+...+ +.+...|..+...+...|++++|..+|+++...+ ..+...+..+...+...|++
T Consensus 8 ~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~ 85 (136)
T 2fo7_A 8 GNAYYKQGDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDY 85 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHcCcHHHHHHHHHHHHHcC-CcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC-CCchHHHHHHHHHHHHhcCH
Confidence 777888888888888888887654 4466778888888888888888888888887764 23556666777777777777
Q ss_pred hHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy767 211 DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 211 ~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m 290 (902)
++|.+.++.+.. .. +.+..+|..+...|.+.|++++|...|.++
T Consensus 86 ~~A~~~~~~~~~-----------------------------------~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 129 (136)
T 2fo7_A 86 DEAIEYYQKALE-----------------------------------LD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQKA 129 (136)
T ss_dssp HHHHHHHHHHHH-----------------------------------HC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-----------------------------------hC-CCChHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 766665554433 21 345667777888888888888888888875
Q ss_pred c
Q psy767 291 G 291 (902)
Q Consensus 291 ~ 291 (902)
.
T Consensus 130 ~ 130 (136)
T 2fo7_A 130 L 130 (136)
T ss_dssp H
T ss_pred H
Confidence 4
No 87
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.36 E-value=3.4e-05 Score=81.18 Aligned_cols=200 Identities=13% Similarity=0.024 Sum_probs=132.8
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCC-ccchhhHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy767 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE-LFLCFSFQLTNLLILVSSDMASAEGILTMMS 256 (902)
Q Consensus 178 A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~ 256 (902)
|+..|++....+ .++..++..+..++...|++++|++++......+. ......+...+.++...|+.+.|.++++.|.
T Consensus 85 a~~~l~~l~~~~-~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~ 163 (310)
T 3mv2_B 85 NIEELENLLKDK-QNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYT 163 (310)
T ss_dssp CCHHHHHTTTTS-CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC-CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 677777776655 45666666777788888888888888877654443 3455566667777777888888888888887
Q ss_pred HCCCCC-----CHHHHHHHHHH--HHHcC--CHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhh
Q psy767 257 QAGLEP-----SAQTYTKLMCG--YAKHG--DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNI 327 (902)
Q Consensus 257 ~~g~~p-----d~~ty~~LI~a--~~~~g--~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~ 327 (902)
+. .| +..+..-|..+ ....| +..+|+.+|+++...
T Consensus 164 ~~--~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~---------------------------------- 207 (310)
T 3mv2_B 164 NA--IEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT---------------------------------- 207 (310)
T ss_dssp HH--SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT----------------------------------
T ss_pred hc--CccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh----------------------------------
Confidence 64 56 35555666656 33334 899999999885322
Q ss_pred hhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHcCC-----------CCCccc-HHHHHHHHHHcCChH
Q psy767 328 CFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS-----------SLVNGD-YLDIIHALAVSGHGE 395 (902)
Q Consensus 328 ~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m~~-----------~~~~~~-~~~li~~~~~~g~~~ 395 (902)
.|+..+-..++.++.+.|++++|...++.+.. .+..++ ...+|......|+
T Consensus 208 ---------------~p~~~~~~lLln~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk-- 270 (310)
T 3mv2_B 208 ---------------FPTWKTQLGLLNLHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL-- 270 (310)
T ss_dssp ---------------SCSHHHHHHHHHHHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--
T ss_pred ---------------CCCcccHHHHHHHHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--
Confidence 23333334444589999999999999987433 244444 3345555556676
Q ss_pred HHHHHHHHcccCCCCCCCHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q psy767 396 YIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSA 441 (902)
Q Consensus 396 ~A~~l~~~m~~~~g~~pd~~t~i~~l~~~g~~~~A~~~~~~m~~~~ 441 (902)
+|.++++++.. ..|+..-+.. +.+....|+++..+|
T Consensus 271 ~a~~l~~qL~~---~~P~hp~i~d-------~~~k~~~Fd~~~~ky 306 (310)
T 3mv2_B 271 DTEDLTNQLVK---LDHEHAFIKH-------HQEIDAKFDELVRKY 306 (310)
T ss_dssp TTHHHHHHHHH---TTCCCHHHHH-------HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHH---hCCCChHHHH-------HHHHHHHHHHHHHHh
Confidence 88999999988 7787754432 344455566665554
No 88
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.32 E-value=2.2e-05 Score=83.25 Aligned_cols=218 Identities=12% Similarity=-0.022 Sum_probs=136.6
Q ss_pred CHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHHcCChhHH
Q psy767 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA----GLEPS-AQTYTKLMCGYAKHGDMDSI 213 (902)
Q Consensus 139 ~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~----g~~pd-~~ty~~ll~a~~~~g~~~~a 213 (902)
++++|...|+.. ...|...|++++|...|.+.... |-.++ ..+|+.+..+|...|++++|
T Consensus 32 ~~~~A~~~~~~a---------------~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A 96 (292)
T 1qqe_A 32 KFEEAADLCVQA---------------ATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNA 96 (292)
T ss_dssp HHHHHHHHHHHH---------------HHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cHHHHHHHHHHH---------------HHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHH
Confidence 366676666665 33566677788777777766442 21112 34677777777788888877
Q ss_pred HHHHHhcccCC----Cc-cchhhHHHHHHHHHhc-CCHHHHHHHHHHHHHCCCC-CC----HHHHHHHHHHHHHcCCHHH
Q psy767 214 KTKIPSLKPQS----EL-FLCFSFQLTNLLILVS-SDMASAEGILTMMSQAGLE-PS----AQTYTKLMCGYAKHGDMDS 282 (902)
Q Consensus 214 ~~l~~~~~~~~----~~-~~~~~~~~~~~~~~~~-g~~~~A~~l~~~m~~~g~~-pd----~~ty~~LI~a~~~~g~~~~ 282 (902)
...++...... .. .....+..+..++... |++++|...|++.....-. .+ ..+|+.+...|.+.|++++
T Consensus 97 ~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~ 176 (292)
T 1qqe_A 97 VDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIE 176 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHH
Confidence 77776654421 11 1123455556666665 8888888888877653110 11 3568889999999999999
Q ss_pred HHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCC-CC-HHHHHHHHHHHHHcC
Q psy767 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE-PS-AQTYTKLMCGYAKHG 360 (902)
Q Consensus 283 A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~-p~-~~t~~~Li~~y~~~g 360 (902)
|+..|++....... .+.. .. ..+|..+..+|...|
T Consensus 177 A~~~~~~al~~~~~-------------------------------------------~~~~~~~~~~~~~~lg~~~~~~g 213 (292)
T 1qqe_A 177 ASDIYSKLIKSSMG-------------------------------------------NRLSQWSLKDYFLKKGLCQLAAT 213 (292)
T ss_dssp HHHHHHHHHHTTSS-------------------------------------------CTTTGGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhc-------------------------------------------CCcccHHHHHHHHHHHHHHHHcC
Confidence 99999974322110 0000 01 126777888999999
Q ss_pred CHHHHHHHHHHc-CCCCCccc------HHHHHHHHH--HcCChHHHHHHHHHcccCCCCCCCHHHH
Q psy767 361 DMDSIRRLLAQN-GSSLVNGD------YLDIIHALA--VSGHGEYIDEIISKIQPGVGYSADAANH 417 (902)
Q Consensus 361 ~~~~A~~~~~~m-~~~~~~~~------~~~li~~~~--~~g~~~~A~~l~~~m~~~~g~~pd~~t~ 417 (902)
++++|...|++. ...|.... +..++.++. ..+++++|++.|+.+.. +.|+..++
T Consensus 214 ~~~~A~~~~~~al~l~p~~~~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~~---l~~~~~~~ 276 (292)
T 1qqe_A 214 DAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMR---LDKWKITI 276 (292)
T ss_dssp CHHHHHHHHHGGGCC---------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSSC---CCHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCc---cHHHHHHH
Confidence 999999999983 33333222 233555554 34567888888888866 77765443
No 89
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.32 E-value=2.8e-06 Score=101.53 Aligned_cols=165 Identities=10% Similarity=0.004 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCC-CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCH
Q psy767 40 VLLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPL-DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNR 118 (902)
Q Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~p-d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~ 118 (902)
+.++-.++.+...|.+.|++++|...|++... +.| +...|+.+...|.+.|++++|+..|++..+.... +.
T Consensus 6 P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~-------l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~ 77 (723)
T 4gyw_A 6 PTHADSLNNLANIKREQGNIEEAVRLYRKALE-------VFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FA 77 (723)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-------HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CH
Confidence 44666778889999999999999999999987 334 5788999999999999999999999999875322 57
Q ss_pred HHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCC-CHHHH
Q psy767 119 VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP-SAQTY 197 (902)
Q Consensus 119 ~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~p-d~~ty 197 (902)
..|..+ -.+|.+.|++++|.+.|++..+.+ +-+...|+.+..+|.+.|++++|++.|++..+. .| +...|
T Consensus 78 ~a~~nL------g~~l~~~g~~~~A~~~~~kAl~l~-P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l--~P~~~~a~ 148 (723)
T 4gyw_A 78 DAYSNM------GNTLKEMQDVQGALQCYTRAIQIN-PAFADAHSNLASIHKDSGNIPEAIASYRTALKL--KPDFPDAY 148 (723)
T ss_dssp HHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CSCCHHHH
T ss_pred HHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCChHHH
Confidence 788888 999999999999999999988765 556789999999999999999999999999886 44 56789
Q ss_pred HHHHHHHHHcCChhHHHHHHHhcc
Q psy767 198 TKLMCGYAKHGDMDSIKTKIPSLK 221 (902)
Q Consensus 198 ~~ll~a~~~~g~~~~a~~l~~~~~ 221 (902)
..+..++...|++++|.+.+++..
T Consensus 149 ~~L~~~l~~~g~~~~A~~~~~kal 172 (723)
T 4gyw_A 149 CNLAHCLQIVCDWTDYDERMKKLV 172 (723)
T ss_dssp HHHHHHHHHTTCCTTHHHHHHHHH
T ss_pred hhhhhHHHhcccHHHHHHHHHHHH
Confidence 999999999999999988877553
No 90
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.24 E-value=0.0036 Score=73.81 Aligned_cols=443 Identities=6% Similarity=-0.037 Sum_probs=234.3
Q ss_pred CchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCC---
Q psy767 98 HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND--- 174 (902)
Q Consensus 98 ~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~--- 174 (902)
...+....|++-+.... -|..+|..+ +..+.+.+.++.+..+|+.+... +|.+...|..-+..-.+.|.
T Consensus 47 ~~~d~i~~lE~~l~~np-~d~~~W~~y------i~~~~~~~~~~~aR~vyEraL~~-fP~~~~lW~~Yi~~E~~~~~~~~ 118 (679)
T 4e6h_A 47 DESDVIGKLNDMIEEQP-TDIFLYVKL------LKHHVSLKQWKQVYETFDKLHDR-FPLMANIWCMRLSLEFDKMEELD 118 (679)
T ss_dssp CCSCHHHHHHHHHHHCT-TCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHTC--CCC
T ss_pred CCHHHHHHHHHHHHHCc-CCHHHHHHH------HHHHHhcCcHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHhhCCcch
Confidence 34555556666555443 488889999 99999999999999999999876 47778889999999889898
Q ss_pred HHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHcCCh----h----HHHHHHHhcccC-CC-c-cchhhHHHHHHHHHh-
Q psy767 175 MASAEGILTMMSQAG-LEPSAQTYTKLMCGYAKHGDM----D----SIKTKIPSLKPQ-SE-L-FLCFSFQLTNLLILV- 241 (902)
Q Consensus 175 ~~~A~~l~~~M~~~g-~~pd~~ty~~ll~a~~~~g~~----~----~a~~l~~~~~~~-~~-~-~~~~~~~~~~~~~~~- 241 (902)
.+.+..+|+...... ..|+...|..-+.-..+.++. + .+.++|+..... |. . .....+..++.+...
T Consensus 119 ~~~v~~lfeRal~~~~~~~sv~LW~~Yl~f~~~~~~~~~~~~~~r~~vr~~FErAl~~vG~~d~~s~~iW~~Yi~f~~~~ 198 (679)
T 4e6h_A 119 AAVIEPVLARCLSKELGNNDLSLWLSYITYVRKKNDIITGGEEARNIVIQAFQVVVDKCAIFEPKSIQFWNEYLHFLEHW 198 (679)
T ss_dssp HHHHHHHHHHHTCSSSCCCCHHHHHHHHHHHHHHSCSTTTHHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHhc
Confidence 999999999998863 138888888877766665554 2 233555554321 22 1 122344444443321
Q ss_pred --------cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcC-------------CHHHHHHHHHHhccCCCCCCHH
Q psy767 242 --------SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG-------------DMDSVRRLLAQSGSSLVNGDYL 300 (902)
Q Consensus 242 --------~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g-------------~~~~A~~lf~~m~~~~~~p~~~ 300 (902)
.++++.+..+|+.........-..+|.....---..+ +++.|...+.++..
T Consensus 199 ~~~~~~eeq~~~~~~R~iy~raL~iP~~~~~~~w~~Y~~fe~~~~~~~a~~~~~e~~~~y~~Ar~~~~e~~~-------- 270 (679)
T 4e6h_A 199 KPVNKFEEQQRVQYIRKLYKTLLCQPMDCLESMWQRYTQWEQDVNQLTARRHIGELSAQYMNARSLYQDWLN-------- 270 (679)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHHHHHHHHHHHCTTTHHHHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred cccCcHHHHhHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHhcCcchHHHHHHHhhHHHHHHHHHHHHHHH--------
Confidence 2345667777777664221111233322111100000 01111111211100
Q ss_pred HHHHHHHHcCCcccHHHHHHHHHHhhhhhccccc--c---hHHhcCCCC-C------HHHHHHHHHHHHHcC-------C
Q psy767 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG--P---MMSQAGLEP-S------AQTYTKLMCGYAKHG-------D 361 (902)
Q Consensus 301 tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~---~m~~~g~~p-~------~~t~~~Li~~y~~~g-------~ 361 (902)
+ ...+... . .....++++ + ...|...+.---..+ .
T Consensus 271 -----------------------~---~~~l~r~~p~~~~~~~~~~~p~~~~~~~~ql~lW~~yi~fEk~~~~~l~~~~~ 324 (679)
T 4e6h_A 271 -----------------------I---TKGLKRNLPITLNQATESNLPKPNEYDVQQLLIWLEWIRWESDNKLELSDDLH 324 (679)
T ss_dssp -----------------------H---TTTCCCCCCSSSTTCCTTTSCCTTCCCHHHHHHHHHHHHHHHTCTTCCCHHHH
T ss_pred -----------------------H---HHhHhhccccccccchhccCCCCchhHHHHHHHHHHHHHHHHhCCccccchhh
Confidence 0 0000000 0 000000110 0 234444443322221 1
Q ss_pred HHHHHHHHHH-cCCCCCccc-HHHHHHHHHHcCChHHHH-HHHHHcccCCCCCCCHHHH----HHHHHHcCCHHHHHHHH
Q psy767 362 MDSIRRLLAQ-NGSSLVNGD-YLDIIHALAVSGHGEYID-EIISKIQPGVGYSADAANH----IYHLINKGQIDAAYRIV 434 (902)
Q Consensus 362 ~~~A~~~~~~-m~~~~~~~~-~~~li~~~~~~g~~~~A~-~l~~~m~~~~g~~pd~~t~----i~~l~~~g~~~~A~~~~ 434 (902)
.+.+..+|++ +...|..+. |...+.-+...|+.++|. ++|++... ..|....+ +...-..|+++.|.++|
T Consensus 325 ~~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~---~~P~s~~Lwl~~a~~ee~~~~~e~aR~iy 401 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQ---CIPNSAVLAFSLSEQYELNTKIPEIETTI 401 (679)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHH---HCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH---hCCCCHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 2334455655 233333443 777888888889999997 99999876 55665543 23334889999999999
Q ss_pred HHHHhccC--------CCCCcccchhhHHHhhhhcCCCCCccccchHH-HHHHHHhcCChHHHHHHHHHHHHc-cCCCCC
Q psy767 435 NTLARSAN--------INGEQLPVGGFLVRHMVKTNQPGVGYSADAAN-HIYHLINKGQIDAAYRIVNTLARS-ANINGE 504 (902)
Q Consensus 435 ~~m~~~~~--------i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-li~~~~k~g~~~~A~~l~~~m~~~-~~~~~~ 504 (902)
+.+..... -.|........+... .+.++. .+....+.|..+.|.++|...... +..
T Consensus 402 ek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~-----------~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~--- 467 (679)
T 4e6h_A 402 LSCIDRIHLDLAALMEDDPTNESAINQLKSK-----------LTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLV--- 467 (679)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH-----------HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGS---
T ss_pred HHHHHHHHHHhhhhhhccCcchhhhhhhccc-----------hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC---
Confidence 99886420 001100000000000 000111 222244678999999999999876 222
Q ss_pred ccchHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCCCChhhH-HHHHHHhcccccccCcchhhHhhhhhccCcchHHHHHH
Q psy767 505 QLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNL-AVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLK 583 (902)
Q Consensus 505 ~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~g~~Pd~~t~-~~ll~a~~~~~~~~g~~~~~~~~~~~~~a~~~~~~ll~ 583 (902)
....|-.....-.+.+.+.+.|..+|+...+. .|+...| ...+.-. . ..|+.+. |.. +|+
T Consensus 468 ~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~--~p~~~~~w~~y~~fe-~---~~~~~~~---------AR~----lfe 528 (679)
T 4e6h_A 468 TPDIYLENAYIEYHISKDTKTACKVLELGLKY--FATDGEYINKYLDFL-I---YVNEESQ---------VKS----LFE 528 (679)
T ss_dssp CTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHH--HTTCHHHHHHHHHHH-H---HHTCHHH---------HHH----HHH
T ss_pred ChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH--CCCchHHHHHHHHHH-H---hCCCHHH---------HHH----HHH
Confidence 22334322222223343379999999996664 3443333 3333222 2 4455555 555 666
Q ss_pred HHHHhhHHHhhhhhhhcccccccchhhhHHHH-----HhhhHHHHHHHHHHHH
Q psy767 584 RFIQAEDAACLQRITDLSTSIHGEVNSLYDLM-----LSFLDAEVLRILQVAE 631 (902)
Q Consensus 584 ~m~~~g~~~~~~~~~~~~~~i~p~~~~~~~li-----~~~~~~~al~ll~~m~ 631 (902)
...... .+. .....+|... ..|..+.+.++.+++.
T Consensus 529 ral~~~------------~~~-~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~ 568 (679)
T 4e6h_A 529 SSIDKI------------SDS-HLLKMIFQKVIFFESKVGSLNSVRTLEKRFF 568 (679)
T ss_dssp HHTTTS------------SST-THHHHHHHHHHHHHHHTCCSHHHHHHHHHHH
T ss_pred HHHHhc------------CCH-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 555443 100 0122233322 3344888888988883
No 91
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.23 E-value=2e-05 Score=83.51 Aligned_cols=200 Identities=15% Similarity=0.017 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHC----CCCCC-HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhh----CC
Q psy767 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQ----GIEPN-RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRD----KT 154 (902)
Q Consensus 84 ~~yn~li~~~~~~g~~~~A~~l~~~M~~~----g~~pd-~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~----~~ 154 (902)
..|+.....|...|++++|...|.+.... |-.++ ..+|+.+ ..+|.+.|++++|...|+.... .|
T Consensus 38 ~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~l------g~~~~~~g~~~~A~~~~~~Al~l~~~~g 111 (292)
T 1qqe_A 38 DLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEA------YKCFKSGGNSVNAVDSLENAIQIFTHRG 111 (292)
T ss_dssp HHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH------HHHHHHCCCHHHHHHHHHHHHHHHHHcC
Confidence 45777788889999999999999887543 32222 4567777 8999999999999999887653 22
Q ss_pred CCC-CHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHCCCC-CC----HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCcc
Q psy767 155 FPI-SEGVFNALIYGHSQA-NDMASAEGILTMMSQAGLE-PS----AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227 (902)
Q Consensus 155 ~~p-~~~~yn~Li~~~~~~-g~~~~A~~l~~~M~~~g~~-pd----~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~ 227 (902)
-.. -..+|+.+...|... |++++|+..|++..+.... .+ ..+|..+...+.+.|++++|...|+.........
T Consensus 112 ~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 112 QFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred CHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 111 135788899999996 9999999999988654110 01 3468888999999999999999999887754433
Q ss_pred chh------hHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCH------HHHHHHHHHHH--HcCCHHHHHHHHHHhc
Q psy767 228 LCF------SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA------QTYTKLMCGYA--KHGDMDSVRRLLAQSG 291 (902)
Q Consensus 228 ~~~------~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~------~ty~~LI~a~~--~~g~~~~A~~lf~~m~ 291 (902)
... .+..+..++...|+++.|...|++.... .|+. ..+..++.+|. ..+++++|+..|+++.
T Consensus 192 ~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l--~p~~~~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~ 267 (292)
T 1qqe_A 192 RLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSE--DPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFM 267 (292)
T ss_dssp TTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-----------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSS
T ss_pred CcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCCCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCC
Confidence 221 3455556677789999999999988753 3332 23445566664 4567888998887653
No 92
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.22 E-value=9.4e-05 Score=77.81 Aligned_cols=239 Identities=12% Similarity=0.004 Sum_probs=157.8
Q ss_pred hhcHHHHHHHhccccchhHHHHHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchH
Q psy767 22 SEATAEVTTVLGALGAFLVLLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFS 101 (902)
Q Consensus 22 s~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~ 101 (902)
.|.|..+.............. .-.+..++|...|+..... .-.|.......+... ...+
T Consensus 26 ~G~yq~~i~e~~~~~~~~~~~--~~~~~~Rs~iAlg~~~~~~--------------~~~~~~~a~~~la~~-~~~~---- 84 (310)
T 3mv2_B 26 TGNFVQCLQEIEKFSKVTDNT--LLFYKAKTLLALGQYQSQD--------------PTSKLGKVLDLYVQF-LDTK---- 84 (310)
T ss_dssp TTCHHHHTHHHHTSSCCCCHH--HHHHHHHHHHHTTCCCCCC--------------SSSTTHHHHHHHHHH-HTTT----
T ss_pred hhHHHHHHHHHHhcCccchHH--HHHHHHHHHHHcCCCccCC--------------CCCHHHHHHHHHHHH-hccc----
Confidence 366777766444333322222 2234456666666655321 112444343333333 3322
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCC-CCCHHHHHHHHHHHHhCCCHHHHHH
Q psy767 102 PTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTF-PISEGVFNALIYGHSQANDMASAEG 180 (902)
Q Consensus 102 A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~-~p~~~~yn~Li~~~~~~g~~~~A~~ 180 (902)
|+..|++....+ .++..++..+ ..++...|++++|++++......+- .-+...+-.++..+.+.|+.+.|.+
T Consensus 85 a~~~l~~l~~~~-~~~~~~~~~l------a~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k 157 (310)
T 3mv2_B 85 NIEELENLLKDK-QNSPYELYLL------ATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTAST 157 (310)
T ss_dssp CCHHHHHTTTTS-CCCHHHHHHH------HHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcC-CCCcHHHHHH------HHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHH
Confidence 778888877655 5566666677 8889999999999999998766552 2366788899999999999999999
Q ss_pred HHHHHHHCCCCC-----CHHHHHHHHHHHHH--cC--ChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHH
Q psy767 181 ILTMMSQAGLEP-----SAQTYTKLMCGYAK--HG--DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251 (902)
Q Consensus 181 l~~~M~~~g~~p-----d~~ty~~ll~a~~~--~g--~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l 251 (902)
.++.|.+. .| +..+...|..++.. .| +..+|..+|+++....+. ......+...+...|++++|+..
T Consensus 158 ~l~~~~~~--~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~--~~~~~lLln~~~~~g~~~eAe~~ 233 (310)
T 3mv2_B 158 IFDNYTNA--IEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPT--WKTQLGLLNLHLQQRNIAEAQGI 233 (310)
T ss_dssp HHHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS--HHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHhc--CccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC--cccHHHHHHHHHHcCCHHHHHHH
Confidence 99999886 56 35666777766433 34 899999999998665432 22223333367778999999999
Q ss_pred HHHHHHC-----C----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCC
Q psy767 252 LTMMSQA-----G----LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL 294 (902)
Q Consensus 252 ~~~m~~~-----g----~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~ 294 (902)
++.+.+. . -+.|..+...+|..+...|+ +|.+++.++....
T Consensus 234 L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~ 283 (310)
T 3mv2_B 234 VELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLD 283 (310)
T ss_dssp HHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTT
T ss_pred HHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhC
Confidence 9876642 1 13456667566666666776 8888888876543
No 93
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.14 E-value=8.9e-05 Score=74.08 Aligned_cols=172 Identities=12% Similarity=0.066 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCC-HHHHHH----------------HHHhHHHHHHHHHcCCHHHHHH
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPN-RVTYQQ----------------LISNSKLISKYCQDGNIEGATK 145 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd-~~t~~~----------------ll~~~~li~~~~~~g~~~~A~~ 145 (902)
+..+-.....+...|++++|...|++..+. .|+ ...|.. + ..+|.+.|++++|..
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~~~~~~~~~~l------g~~~~~~g~~~~A~~ 75 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIAL--NIDRTEMYYWTNVDKNSEISSKLATEL------ALAYKKNRNYDKAYL 75 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CHHHHHHHHHHHSCTTSHHHHHHHHHH------HHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--CCCChHHHHHhhhcchhhhhHHHHHHH------HHHHHHCCCHHHHHH
Confidence 334445556678899999999999998865 343 334444 5 888899999999999
Q ss_pred HHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh--hHHHHHHHhcccC
Q psy767 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM--DSIKTKIPSLKPQ 223 (902)
Q Consensus 146 l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~--~~a~~l~~~~~~~ 223 (902)
.|+...+.+ |-+...|..+...|...|++++|+..|++..+.. +-+..+|..+..+|...|.. ..+...+.....
T Consensus 76 ~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~- 152 (208)
T 3urz_A 76 FYKELLQKA-PNNVDCLEACAEMQVCRGQEKDALRMYEKILQLE-ADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSS- 152 (208)
T ss_dssp HHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---C-
T ss_pred HHHHHHHHC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC-
Confidence 999988765 5577889999999999999999999999998864 22566788887777665543 334445544432
Q ss_pred CCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHH
Q psy767 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYT 268 (902)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~ 268 (902)
..+....+......+...|++++|...|++..+. .|+.....
T Consensus 153 -~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l--~P~~~~~~ 194 (208)
T 3urz_A 153 -PTKMQYARYRDGLSKLFTTRYEKARNSLQKVILR--FPSTEAQK 194 (208)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTT--SCCHHHHH
T ss_pred -CCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCHHHHH
Confidence 1121122222233334466777777777766654 45544333
No 94
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.13 E-value=2.3e-05 Score=81.28 Aligned_cols=172 Identities=8% Similarity=-0.087 Sum_probs=121.2
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhc
Q psy767 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340 (902)
Q Consensus 261 ~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~ 340 (902)
+.+...+-.+...+.+.|++++|...|+++... .
T Consensus 12 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~----------------------------------------------~ 45 (261)
T 3qky_A 12 HSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTY----------------------------------------------G 45 (261)
T ss_dssp CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGG----------------------------------------------C
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh----------------------------------------------C
Confidence 445677777888999999999999999984332 1
Q ss_pred CCCCC-HHHHHHHHHHHHHcCCHHHHHHHHHHc-CCCCCccc----HHHHHHHHHH--------cCChHHHHHHHHHccc
Q psy767 341 GLEPS-AQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVNGD----YLDIIHALAV--------SGHGEYIDEIISKIQP 406 (902)
Q Consensus 341 g~~p~-~~t~~~Li~~y~~~g~~~~A~~~~~~m-~~~~~~~~----~~~li~~~~~--------~g~~~~A~~l~~~m~~ 406 (902)
.-.|. ...+..+..+|.+.|++++|...|++. ...|..+. +..+..++.. .|++++|.+.|++...
T Consensus 46 p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 125 (261)
T 3qky_A 46 RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFID 125 (261)
T ss_dssp SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHH
Confidence 11111 567788889999999999999999983 33333332 5567778888 9999999999999987
Q ss_pred CCCCCCCHH------------------HHHHHHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCcc
Q psy767 407 GVGYSADAA------------------NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGY 468 (902)
Q Consensus 407 ~~g~~pd~~------------------t~i~~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~ 468 (902)
...-.+... .+-..+...|++++|...|+.+.+.+.-.+..+.
T Consensus 126 ~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~------------------- 186 (261)
T 3qky_A 126 RYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADD------------------- 186 (261)
T ss_dssp HCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHH-------------------
T ss_pred HCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHH-------------------
Confidence 222222222 2234456899999999999999886433222110
Q ss_pred ccchHHHHHHHHhc----------CChHHHHHHHHHHHHcc
Q psy767 469 SADAANHIYHLINK----------GQIDAAYRIVNTLARSA 499 (902)
Q Consensus 469 ~~~~~~li~~~~k~----------g~~~~A~~l~~~m~~~~ 499 (902)
..+.+...|.+. |++++|...|+.+....
T Consensus 187 --a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~ 225 (261)
T 3qky_A 187 --ALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIF 225 (261)
T ss_dssp --HHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHC
Confidence 133455556655 88999999999988764
No 95
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.03 E-value=0.00036 Score=69.86 Aligned_cols=177 Identities=14% Similarity=0.041 Sum_probs=141.7
Q ss_pred hHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCC----CH
Q psy767 100 FSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN----DM 175 (902)
Q Consensus 100 ~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g----~~ 175 (902)
.+|++.|++..+.| +...+..+ -..|...+++++|...|+...+.| +...+..|-..|.. + +.
T Consensus 3 ~eA~~~~~~aa~~g---~~~a~~~l------g~~~~~~~~~~~A~~~~~~a~~~g---~~~a~~~lg~~y~~-~g~~~~~ 69 (212)
T 3rjv_A 3 TEPGSQYQQQAEAG---DRRAQYYL------ADTWVSSGDYQKAEYWAQKAAAQG---DGDALALLAQLKIR-NPQQADY 69 (212)
T ss_dssp -CTTHHHHHHHHTT---CHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHTT---CHHHHHHHHHHTTS-STTSCCH
T ss_pred chHHHHHHHHHHCC---CHHHHHHH------HHHHhcCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHc-CCCCCCH
Confidence 35788888888775 67777778 888889999999999999998887 45778888888887 6 89
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH----cCChhHHHHHHHhcccCCCc-cchhhHHHHHHHHHh----cCCHH
Q psy767 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSIKTKIPSLKPQSEL-FLCFSFQLTNLLILV----SSDMA 246 (902)
Q Consensus 176 ~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~----~g~~~~a~~l~~~~~~~~~~-~~~~~~~~~~~~~~~----~g~~~ 246 (902)
++|+.+|+...+.| +...+..|-..|.. .+++++|...|+.....+.. .....+..+..++.. .++.+
T Consensus 70 ~~A~~~~~~A~~~g---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~ 146 (212)
T 3rjv_A 70 PQARQLAEKAVEAG---SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDV 146 (212)
T ss_dssp HHHHHHHHHHHHTT---CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHH
T ss_pred HHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHH
Confidence 99999999998876 67778888888877 88999999999999887653 224556666666666 77999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHc-C-----CHHHHHHHHHHhccCC
Q psy767 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKH-G-----DMDSVRRLLAQSGSSL 294 (902)
Q Consensus 247 ~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~-g-----~~~~A~~lf~~m~~~~ 294 (902)
.|...|++..+. ..+...+..|-..|... | +.++|..+|+.....|
T Consensus 147 ~A~~~~~~A~~~--~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g 198 (212)
T 3rjv_A 147 KASEYFKGSSSL--SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEG 198 (212)
T ss_dssp HHHHHHHHHHHT--SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc--CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 999999999886 23455677777777764 3 8999999999865544
No 96
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.03 E-value=0.00011 Score=77.51 Aligned_cols=131 Identities=12% Similarity=0.042 Sum_probs=94.1
Q ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHH
Q psy767 156 PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235 (902)
Q Consensus 156 ~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~ 235 (902)
+.+...+..+...+.+.|++++|+..|++..+.. .-+...+..+...+...|++++|...++.+........ ......
T Consensus 114 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~-~~~~~~ 191 (287)
T 3qou_A 114 PREEELXAQQAMQLMQESNYTDALPLLXDAWQLS-NQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTR-YQGLVA 191 (287)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHH-HHHHHH
T ss_pred CCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhC-CcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchH-HHHHHH
Confidence 4456777888888999999999999999998873 22567888899999999999999999999877544221 122222
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 236 ~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~ 289 (902)
...+...++.+.|...+++..... +.+...+..+...|...|++++|+..|.+
T Consensus 192 ~~~l~~~~~~~~a~~~l~~al~~~-P~~~~~~~~la~~l~~~g~~~~A~~~l~~ 244 (287)
T 3qou_A 192 QIELLXQAADTPEIQQLQQQVAEN-PEDAALATQLALQLHQVGRNEEALELLFG 244 (287)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhhcccCccHHHHHHHHhcC-CccHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 222344555666677777666553 45566777777777777777777777776
No 97
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.00 E-value=0.00025 Score=71.63 Aligned_cols=160 Identities=12% Similarity=0.019 Sum_probs=119.7
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCC-CC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCH----HHHHHHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTF-PI-SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA----QTYTKLMCGY 204 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~-~p-~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~----~ty~~ll~a~ 204 (902)
...+.+.|++++|...|+.+....- .| ....+..+..+|.+.|++++|+..|++..+.. |+. ..+..+..++
T Consensus 11 a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~--P~~~~~~~a~~~~g~~~ 88 (225)
T 2yhc_A 11 AQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN--PTHPNIDYVMYMRGLTN 88 (225)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTCTTHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC--cCCCcHHHHHHHHHHHH
Confidence 6678899999999999999887431 11 23578888999999999999999999998863 332 2344444444
Q ss_pred HH------------------cCChhHHHHHHHhcccCCCccchhhH----------------HHHHHHHHhcCCHHHHHH
Q psy767 205 AK------------------HGDMDSIKTKIPSLKPQSELFLCFSF----------------QLTNLLILVSSDMASAEG 250 (902)
Q Consensus 205 ~~------------------~g~~~~a~~l~~~~~~~~~~~~~~~~----------------~~~~~~~~~~g~~~~A~~ 250 (902)
.. .|+.++|...|+.+....+....... ..+...+...|+++.|..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 168 (225)
T 2yhc_A 89 MALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVN 168 (225)
T ss_dssp HHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHH
Confidence 43 57899999999999876543322110 233445667899999999
Q ss_pred HHHHHHHCCCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHhccCC
Q psy767 251 ILTMMSQAGLEPS----AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL 294 (902)
Q Consensus 251 l~~~m~~~g~~pd----~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~ 294 (902)
.|+.+.+. .|+ ...+..+..+|.+.|+.++|.+.++.+...+
T Consensus 169 ~~~~~l~~--~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~ 214 (225)
T 2yhc_A 169 RVEGMLRD--YPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANS 214 (225)
T ss_dssp HHHHHHHH--STTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHH--CcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhC
Confidence 99999876 343 2568889999999999999999999876654
No 98
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.00 E-value=0.00026 Score=71.57 Aligned_cols=62 Identities=8% Similarity=-0.034 Sum_probs=48.4
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHHCC
Q psy767 475 HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDEN 537 (902)
Q Consensus 475 li~~~~k~g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~g 537 (902)
+...|.+.|++++|...|+.+......++.....+..+...+.+.|+ .++|+..++.+...+
T Consensus 153 ~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~-~~~A~~~~~~l~~~~ 214 (225)
T 2yhc_A 153 VAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQM-NAQAEKVAKIIAANS 214 (225)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCC-cHHHHHHHHHHHhhC
Confidence 44457889999999999999887643332223567788999999999 999999999888764
No 99
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.99 E-value=0.00027 Score=73.11 Aligned_cols=170 Identities=10% Similarity=-0.048 Sum_probs=129.7
Q ss_pred CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCC---HHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCC-CC
Q psy767 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS---EGVFNALIYGHSQANDMASAEGILTMMSQAGL-EP 192 (902)
Q Consensus 117 d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~---~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~-~p 192 (902)
+...+-.+ ...+.+.|++++|...|+.+.... +-+ ...+..+..+|.+.|++++|+..|+...+... .|
T Consensus 14 ~~~~~~~~------a~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~ 86 (261)
T 3qky_A 14 SPQEAFER------AMEFYNQGKYDRAIEYFKAVFTYG-RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDP 86 (261)
T ss_dssp SHHHHHHH------HHHHHHTTCHHHHHHHHHHHGGGC-SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred CHHHHHHH------HHHHHHhCCHHHHHHHHHHHHHhC-CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCc
Confidence 44555556 778889999999999999998764 333 67888899999999999999999999988632 12
Q ss_pred C-HHHHHHHHHHHHH--------cCChhHHHHHHHhcccCCCccchh--hH--------------HHHHHHHHhcCCHHH
Q psy767 193 S-AQTYTKLMCGYAK--------HGDMDSIKTKIPSLKPQSELFLCF--SF--------------QLTNLLILVSSDMAS 247 (902)
Q Consensus 193 d-~~ty~~ll~a~~~--------~g~~~~a~~l~~~~~~~~~~~~~~--~~--------------~~~~~~~~~~g~~~~ 247 (902)
. ...+..+..++.. .|++++|...|+.+....+..... .. ..+..++...|+++.
T Consensus 87 ~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 166 (261)
T 3qky_A 87 RVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEA 166 (261)
T ss_dssp THHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHH
Confidence 2 4467777788888 999999999999987754332211 11 344566777999999
Q ss_pred HHHHHHHHHHCCCC--CCHHHHHHHHHHHHHc----------CCHHHHHHHHHHhccC
Q psy767 248 AEGILTMMSQAGLE--PSAQTYTKLMCGYAKH----------GDMDSVRRLLAQSGSS 293 (902)
Q Consensus 248 A~~l~~~m~~~g~~--pd~~ty~~LI~a~~~~----------g~~~~A~~lf~~m~~~ 293 (902)
|...|+.+.+..-. .....+..+..+|... |++++|...|++....
T Consensus 167 A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~ 224 (261)
T 3qky_A 167 AAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQI 224 (261)
T ss_dssp HHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHH
Confidence 99999999875321 1345777888888866 8999999999987654
No 100
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.95 E-value=0.00017 Score=76.94 Aligned_cols=152 Identities=10% Similarity=0.020 Sum_probs=99.1
Q ss_pred cCCHHHHHHHHHHhhhC------CCCCCH----HHHHHHHHHHHhCCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHH
Q psy767 137 DGNIEGATKILEFMRDK------TFPISE----GVFNALIYGHSQANDMASAEGILTMMSQA----GLEPS-AQTYTKLM 201 (902)
Q Consensus 137 ~g~~~~A~~l~~~m~~~------~~~p~~----~~yn~Li~~~~~~g~~~~A~~l~~~M~~~----g~~pd-~~ty~~ll 201 (902)
.|++++|.+++++..+. ++.++. ..|+.....|...|++++|...|.+..+. |-.+. ..+|+.+.
T Consensus 4 ~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg 83 (307)
T 2ifu_A 4 AQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAG 83 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45667777777654431 112332 35677778888899999999999877543 21111 34788888
Q ss_pred HHHHHcCChhHHHHHHHhcccC----CCc-cchhhHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHH
Q psy767 202 CGYAKHGDMDSIKTKIPSLKPQ----SEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQA----GLEP-SAQTYTKLM 271 (902)
Q Consensus 202 ~a~~~~g~~~~a~~l~~~~~~~----~~~-~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~----g~~p-d~~ty~~LI 271 (902)
..|...|++++|...|+..... +.. .....+..+..++.. |+++.|...|++.... |-.+ ...+|+.+.
T Consensus 84 ~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg 162 (307)
T 2ifu_A 84 MMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKAS 162 (307)
T ss_dssp HHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHH
Confidence 8999999999998888765432 111 112344455555666 8888888888776642 1111 145677777
Q ss_pred HHHHHcCCHHHHHHHHHH
Q psy767 272 CGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 272 ~a~~~~g~~~~A~~lf~~ 289 (902)
..|.+.|++++|+..|++
T Consensus 163 ~~~~~~g~~~~A~~~~~~ 180 (307)
T 2ifu_A 163 RLLVRQQKFDEAAASLQK 180 (307)
T ss_dssp HHHHHTTCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHH
Confidence 888888888888888876
No 101
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.94 E-value=0.00032 Score=69.77 Aligned_cols=133 Identities=10% Similarity=-0.054 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHH
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~y 162 (902)
...|..+...+...|++++|...|++. +.|+...|..+ ...|.+.|++++|...|+.....+ +.+...|
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~~~~~~a----~~~~~~~~~~l------g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~ 74 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGALDAFSAV----QDPHSRICFNI------GCMYTILKNMTEAEKAFTRSINRD-KHLAVAY 74 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTS----SSCCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHH----cCCChHHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-ccchHHH
Confidence 344566777788889999999988876 36677788888 888889999999999998887765 5567888
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHCCCC--------------C-CHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCc
Q psy767 163 NALIYGHSQANDMASAEGILTMMSQAGLE--------------P-SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226 (902)
Q Consensus 163 n~Li~~~~~~g~~~~A~~l~~~M~~~g~~--------------p-d~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~ 226 (902)
..+..+|...|++++|+..|+...+.... | ....+..+..+|...|++++|...|+........
T Consensus 75 ~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 153 (213)
T 1hh8_A 75 FQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSE 153 (213)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcc
Confidence 88889999999999999999988875311 1 1257777888888888888888888887765543
No 102
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.92 E-value=0.00011 Score=77.63 Aligned_cols=163 Identities=12% Similarity=-0.032 Sum_probs=130.5
Q ss_pred CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHH
Q psy767 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196 (902)
Q Consensus 117 d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t 196 (902)
+...+..+ ...+.+.|++++|...|+...... |-+...+..+...+.+.|++++|..+|+..... .|+...
T Consensus 116 ~~~~~~~~------a~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~--~p~~~~ 186 (287)
T 3qou_A 116 EEELXAQQ------AMQLMQESNYTDALPLLXDAWQLS-NQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQ--DQDTRY 186 (287)
T ss_dssp HHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGG--GCSHHH
T ss_pred chhhHHHH------HHHHHhCCCHHHHHHHHHHHHHhC-CcchhHHHHHHHHHHHCCCHHHHHHHHHhCchh--hcchHH
Confidence 44455566 788889999999999999988765 557788999999999999999999999998765 466553
Q ss_pred HHH-HHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHH
Q psy767 197 YTK-LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE-PSAQTYTKLMCGY 274 (902)
Q Consensus 197 y~~-ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~-pd~~ty~~LI~a~ 274 (902)
... ....+...++.++|...++......+ .+...+..+..++...|++++|...|.++.+..-. .+...+..+...|
T Consensus 187 ~~~~~~~~l~~~~~~~~a~~~l~~al~~~P-~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~ 265 (287)
T 3qou_A 187 QGLVAQIELLXQAADTPEIQQLQQQVAENP-EDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEIL 265 (287)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCccHHHHHHHHhcCC-ccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHH
Confidence 333 33346777888888888888776543 34456777788888999999999999999986421 1267899999999
Q ss_pred HHcCCHHHHHHHHHH
Q psy767 275 AKHGDMDSVRRLLAQ 289 (902)
Q Consensus 275 ~~~g~~~~A~~lf~~ 289 (902)
...|+.++|...|++
T Consensus 266 ~~~g~~~~a~~~~r~ 280 (287)
T 3qou_A 266 AALGTGDALASXYRR 280 (287)
T ss_dssp HHHCTTCHHHHHHHH
T ss_pred HHcCCCCcHHHHHHH
Confidence 999999999999986
No 103
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.92 E-value=8.6e-05 Score=71.85 Aligned_cols=123 Identities=11% Similarity=0.014 Sum_probs=56.0
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHH-HHh
Q psy767 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL-ILV 241 (902)
Q Consensus 163 n~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~-~~~ 241 (902)
..+...+.+.|++++|+..|++..+.. +-+...+..+...+...|++++|...++......+ +.........+ +..
T Consensus 10 ~~~a~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~ 86 (176)
T 2r5s_A 10 LKQVSELLQQGEHAQALNVIQTLSDEL-QSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQ 86 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSCHHH-HTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHh
Confidence 334445555555555555555544331 11334555555555555555555555555544322 11111111000 001
Q ss_pred cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 242 ~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~ 289 (902)
.+....|...++...+.. +-+...+..+...|...|++++|...|++
T Consensus 87 ~~~~~~a~~~~~~al~~~-P~~~~~~~~la~~~~~~g~~~~A~~~~~~ 133 (176)
T 2r5s_A 87 QAAESPELKRLEQELAAN-PDNFELACELAVQYNQVGRDEEALELLWN 133 (176)
T ss_dssp HHTSCHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hcccchHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 111112344444444332 23455566666666666666666666655
No 104
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.90 E-value=0.00015 Score=84.67 Aligned_cols=154 Identities=13% Similarity=0.021 Sum_probs=102.0
Q ss_pred CCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHH
Q psy767 56 EPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135 (902)
Q Consensus 56 ~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~ 135 (902)
.|++++|...|++... --+-+...|..+...|.+.|++++|.+.|++..+.. +-+...|..+ ...|.
T Consensus 2 ~g~~~~A~~~~~~al~------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l------g~~~~ 68 (568)
T 2vsy_A 2 TADGPRELLQLRAAVR------HRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALH-PGHPEAVARL------GRVRW 68 (568)
T ss_dssp -------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTS-TTCHHHHHHH------HHHHH
T ss_pred CccHHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHH------HHHHH
Confidence 3667778777777765 122346778888888888888888888888887643 2246667777 78888
Q ss_pred HcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHc---CChhH
Q psy767 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH---GDMDS 212 (902)
Q Consensus 136 ~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~---g~~~~ 212 (902)
..|++++|.+.|+...+.+ +.+...|..+..+|.+.|++++|.+.|++..+.. .-+...+..+...+... |+.++
T Consensus 69 ~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~~~~g~~~~ 146 (568)
T 2vsy_A 69 TQQRHAEAAVLLQQASDAA-PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLL-PEEPYITAQLLNWRRRLCDWRALDV 146 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCTTHHH
T ss_pred HCCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhhccccHHH
Confidence 8888888888888877654 4566788888888888888888888888887763 22566777788888888 77777
Q ss_pred HHHHHHhcccCC
Q psy767 213 IKTKIPSLKPQS 224 (902)
Q Consensus 213 a~~l~~~~~~~~ 224 (902)
|.+.+++....+
T Consensus 147 A~~~~~~al~~~ 158 (568)
T 2vsy_A 147 LSAQVRAAVAQG 158 (568)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhcC
Confidence 777777665543
No 105
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.90 E-value=0.00032 Score=62.32 Aligned_cols=115 Identities=13% Similarity=0.105 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHH
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~y 162 (902)
...|..+...+...|++++|..+|+++.+.. +.+..++..+ ...+.+.|++++|..+|+.+...+ +.+..+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l------a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~ 80 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNL------GNAYYKQGDYDEAIEYYQKALELD-PNNAEAW 80 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-cCcHHHHHHH------HHHHHHhCCHHHHHHHHHHHHHhC-CccHHHH
Confidence 5678888888999999999999999988653 2356677777 888899999999999999887764 5567888
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q psy767 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206 (902)
Q Consensus 163 n~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~ 206 (902)
..+...|...|++++|...|+++.+.. ..+...+..+...+..
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHh
Confidence 889999999999999999999888763 2244455555444433
No 106
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.88 E-value=0.00019 Score=83.87 Aligned_cols=152 Identities=10% Similarity=-0.031 Sum_probs=96.9
Q ss_pred CCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCH
Q psy767 96 NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175 (902)
Q Consensus 96 ~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~ 175 (902)
.|++++|...|++..+.. +-+...|..+ ...|.+.|++++|.+.|++..+.+ +-+...|..+...|...|++
T Consensus 2 ~g~~~~A~~~~~~al~~~-p~~~~~~~~l------g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~ 73 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHR-PQDFVAWLML------ADAELGMGDTTAGEMAVQRGLALH-PGHPEAVARLGRVRWTQQRH 73 (568)
T ss_dssp --------------------CCHHHHHHH------HHHHHHHTCHHHHHHHHHHHHTTS-TTCHHHHHHHHHHHHHTTCH
T ss_pred CccHHHHHHHHHHHHHhC-CCCHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHCCCH
Confidence 367888888888877542 1246667777 888888899999999998887765 55677888888888899999
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHH
Q psy767 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255 (902)
Q Consensus 176 ~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m 255 (902)
++|.+.|++..+.. .-+...|..+..+|...|++++|.+.++......
T Consensus 74 ~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~------------------------------- 121 (568)
T 2vsy_A 74 AEAAVLLQQASDAA-PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLL------------------------------- 121 (568)
T ss_dssp HHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------------------------------
T ss_pred HHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------------------------------
Confidence 99999998888763 2246677778888888888887777666554422
Q ss_pred HHCCCCCCHHHHHHHHHHHHHc---CCHHHHHHHHHHhcc
Q psy767 256 SQAGLEPSAQTYTKLMCGYAKH---GDMDSVRRLLAQSGS 292 (902)
Q Consensus 256 ~~~g~~pd~~ty~~LI~a~~~~---g~~~~A~~lf~~m~~ 292 (902)
+.+...+..+...|... |+.++|.+.|++...
T Consensus 122 -----p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~ 156 (568)
T 2vsy_A 122 -----PEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVA 156 (568)
T ss_dssp -----TTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHh
Confidence 33455666666666666 677777777766543
No 107
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.87 E-value=6.8e-05 Score=89.63 Aligned_cols=184 Identities=9% Similarity=-0.055 Sum_probs=140.7
Q ss_pred HHCCCchHHHHHHHHHH--------HCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHH
Q psy767 94 LDNEHTFSPTDFLAKLE--------SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165 (902)
Q Consensus 94 ~~~g~~~~A~~l~~~M~--------~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~L 165 (902)
...|++++|++.|++.. +.. ..+...+..+ ...|.+.|++++|...|+...+.+ +-+...|..+
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~-p~~~~~~~~~------a~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~l 473 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDF-SESVELPLME------VRALLDLGDVAKATRKLDDLAERV-GWRWRLVWYR 473 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CC-TTCSHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHH-CCCHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhccccccccc-ccchhHHHHH------HHHHHhcCCHHHHHHHHHHHhccC-cchHHHHHHH
Confidence 67899999999999988 322 2345667777 888999999999999999988765 5577899999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCH
Q psy767 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM 245 (902)
Q Consensus 166 i~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 245 (902)
-.+|.+.|++++|++.|++..+... -+...|..+..+|.+.|++++ ...|+...+.+.. +...+..+..++...|++
T Consensus 474 g~~~~~~g~~~~A~~~~~~al~l~P-~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~ 550 (681)
T 2pzi_A 474 AVAELLTGDYDSATKHFTEVLDTFP-GELAPKLALAATAELAGNTDE-HKFYQTVWSTNDG-VISAAFGLARARSAEGDR 550 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHST-TCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTT-CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCc-hHHHHHHHHHHHHHcCCH
Confidence 9999999999999999999988742 256788899999999999999 9999888765433 334566677777888999
Q ss_pred HHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHcCC--------HHHHHHHHHHh
Q psy767 246 ASAEGILTMMSQAGLEPS-AQTYTKLMCGYAKHGD--------MDSVRRLLAQS 290 (902)
Q Consensus 246 ~~A~~l~~~m~~~g~~pd-~~ty~~LI~a~~~~g~--------~~~A~~lf~~m 290 (902)
++|...|++..+. .|+ ...|..+..+|...|+ +++|.+.+..+
T Consensus 551 ~~A~~~~~~al~l--~P~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~~ 602 (681)
T 2pzi_A 551 VGAVRTLDEVPPT--SRHFTTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEAL 602 (681)
T ss_dssp HHHHHHHHTSCTT--STTHHHHHHHHHHHTC-------CCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhhccc--CcccHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhhC
Confidence 9999988887765 344 5667777777766554 45555555443
No 108
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.85 E-value=9e-05 Score=71.71 Aligned_cols=156 Identities=9% Similarity=-0.012 Sum_probs=118.7
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH-HHHcCC
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG-YAKHGD 209 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a-~~~~g~ 209 (902)
...+.+.|++++|...|+...+.+ |-+...|..+...+.+.|++++|+..|+..... .|+...+..+... +...+.
T Consensus 13 a~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~--~p~~~~~~~~~~~~~~~~~~ 89 (176)
T 2r5s_A 13 VSELLQQGEHAQALNVIQTLSDEL-QSRGDVKLAKADCLLETKQFELAQELLATIPLE--YQDNSYKSLIAKLELHQQAA 89 (176)
T ss_dssp HHHHHHTTCHHHHHHHHHTSCHHH-HTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGG--GCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhc--cCChHHHHHHHHHHHHhhcc
Confidence 677889999999999999987654 456788999999999999999999999988765 3454433322211 223233
Q ss_pred hhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy767 210 MDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP-SAQTYTKLMCGYAKHGDMDSVRRLLA 288 (902)
Q Consensus 210 ~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~p-d~~ty~~LI~a~~~~g~~~~A~~lf~ 288 (902)
...+...++......+. +...+..+..++...|++++|...|+++.+..-.+ +...+..+...|...|+.++|...|+
T Consensus 90 ~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~ 168 (176)
T 2r5s_A 90 ESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYR 168 (176)
T ss_dssp SCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred cchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 34567777777654332 34566777788888999999999999999875332 36689999999999999999999998
Q ss_pred Hh
Q psy767 289 QS 290 (902)
Q Consensus 289 ~m 290 (902)
+.
T Consensus 169 ~a 170 (176)
T 2r5s_A 169 RQ 170 (176)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 109
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.81 E-value=0.00044 Score=68.92 Aligned_cols=155 Identities=8% Similarity=-0.064 Sum_probs=112.3
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHH----------------HHHHHHhCCCHHHHHHHHHHHHHCCCCCCH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA----------------LIYGHSQANDMASAEGILTMMSQAGLEPSA 194 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~----------------Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~ 194 (902)
...+.+.|++++|...|+.....+ |-+...|.. +..+|.+.|++++|+..|++..+.. +-+.
T Consensus 11 g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~ 88 (208)
T 3urz_A 11 VSAAIEAGQNGQAVSYFRQTIALN-IDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKA-PNNV 88 (208)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-HHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhC-CCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC-CCCH
Confidence 456678999999999999987764 334556666 8899999999999999999998874 2267
Q ss_pred HHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcC--CHHHHHHHHHHHHHCCCCCCH--HHHHHH
Q psy767 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS--DMASAEGILTMMSQAGLEPSA--QTYTKL 270 (902)
Q Consensus 195 ~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~A~~l~~~m~~~g~~pd~--~ty~~L 270 (902)
..|..+...+...|++++|...|+......+.. ...+..+..++...| ....+...+.... .|+. ..|..+
T Consensus 89 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~a~~~~ 163 (208)
T 3urz_A 89 DCLEACAEMQVCRGQEKDALRMYEKILQLEADN-LAANIFLGNYYYLTAEQEKKKLETDYKKLS----SPTKMQYARYRD 163 (208)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHh----CCCchhHHHHHH
Confidence 789999999999999999999999998765443 334444444443333 3445555565554 3443 344445
Q ss_pred HHHHHHcCCHHHHHHHHHHhcc
Q psy767 271 MCGYAKHGDMDSVRRLLAQSGS 292 (902)
Q Consensus 271 I~a~~~~g~~~~A~~lf~~m~~ 292 (902)
-.++...|++++|...|++...
T Consensus 164 g~~~~~~~~~~~A~~~~~~al~ 185 (208)
T 3urz_A 164 GLSKLFTTRYEKARNSLQKVIL 185 (208)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTT
T ss_pred HHHHHHccCHHHHHHHHHHHHH
Confidence 5667778999999999998543
No 110
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.78 E-value=0.00026 Score=84.55 Aligned_cols=151 Identities=11% Similarity=-0.075 Sum_probs=127.4
Q ss_pred HHcCCHHHHHHHHHHhh--------hCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q psy767 135 CQDGNIEGATKILEFMR--------DKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206 (902)
Q Consensus 135 ~~~g~~~~A~~l~~~m~--------~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~ 206 (902)
...|++++|.+.++... +.. +.+...|..+..+|.+.|++++|++.|++..+.. .-+...|..+-.+|..
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~-p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~ 479 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDF-SESVELPLMEVRALLDLGDVAKATRKLDDLAERV-GWRWRLVWYRAVAELL 479 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CC-TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhccccccccc-ccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccC-cchHHHHHHHHHHHHH
Confidence 67899999999999987 332 5566889999999999999999999999998864 2366789999999999
Q ss_pred cCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q psy767 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286 (902)
Q Consensus 207 ~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~l 286 (902)
.|++++|...|++..+.... +...+..+..++...|++++ ...|++..+.. +.+...|..+-.+|.+.|++++|++.
T Consensus 480 ~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~-P~~~~a~~~lg~~~~~~g~~~~A~~~ 556 (681)
T 2pzi_A 480 TGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTN-DGVISAAFGLARARSAEGDRVGAVRT 556 (681)
T ss_dssp HTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhC-CchHHHHHHHHHHHHHcCCHHHHHHH
Confidence 99999999999998875433 34556677777888999999 99999988764 55678899999999999999999999
Q ss_pred HHHh
Q psy767 287 LAQS 290 (902)
Q Consensus 287 f~~m 290 (902)
|++.
T Consensus 557 ~~~a 560 (681)
T 2pzi_A 557 LDEV 560 (681)
T ss_dssp HHTS
T ss_pred HHhh
Confidence 9874
No 111
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.78 E-value=0.00025 Score=70.52 Aligned_cols=130 Identities=10% Similarity=-0.051 Sum_probs=109.4
Q ss_pred HHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHH
Q psy767 43 VLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ 122 (902)
Q Consensus 43 ~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~ 122 (902)
...+..+...+...|++++|...|..... |+...|..+...|...|++++|...|++..+.. +.+...|.
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~~---------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~ 75 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGALDAFSAVQD---------PHSRICFNIGCMYTILKNMTEAEKAFTRSINRD-KHLAVAYF 75 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSSS---------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHcC---------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccchHHHH
Confidence 34445566777788999999999988865 688999999999999999999999999988754 33667788
Q ss_pred HHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCC----------------HHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy767 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS----------------EGVFNALIYGHSQANDMASAEGILTMMS 186 (902)
Q Consensus 123 ~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~----------------~~~yn~Li~~~~~~g~~~~A~~l~~~M~ 186 (902)
.+ ..+|...|++++|...|+...+.. +.+ ...|..+..+|.+.|++++|...|+...
T Consensus 76 ~l------g~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 148 (213)
T 1hh8_A 76 QR------GMLYYQTEKYDLAIKDLKEALIQL-RGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALAT 148 (213)
T ss_dssp HH------HHHHHHTTCHHHHHHHHHHHHHTT-TTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HH------HHHHHHcccHHHHHHHHHHHHHhC-CCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 88 999999999999999999987753 222 2778899999999999999999999998
Q ss_pred HCC
Q psy767 187 QAG 189 (902)
Q Consensus 187 ~~g 189 (902)
+..
T Consensus 149 ~~~ 151 (213)
T 1hh8_A 149 SMK 151 (213)
T ss_dssp TTC
T ss_pred HcC
Confidence 874
No 112
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.78 E-value=0.0004 Score=73.97 Aligned_cols=188 Identities=12% Similarity=0.037 Sum_probs=132.5
Q ss_pred CCCchHHHHHHHHHHHC------CCCCCHH----HHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhC----CCCC-CHH
Q psy767 96 NEHTFSPTDFLAKLESQ------GIEPNRV----TYQQLISNSKLISKYCQDGNIEGATKILEFMRDK----TFPI-SEG 160 (902)
Q Consensus 96 ~g~~~~A~~l~~~M~~~------g~~pd~~----t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~----~~~p-~~~ 160 (902)
.|++++|.+++++..+. +..++.. .|... ...|...|++++|...|....+. +-++ -..
T Consensus 4 ~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a------~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~ 77 (307)
T 2ifu_A 4 AQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKA------AVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAK 77 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 35566777777665431 1134422 34445 77788899999999999876432 2111 135
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHC----CCCCC--HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCc-----cch
Q psy767 161 VFNALIYGHSQANDMASAEGILTMMSQA----GLEPS--AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL-----FLC 229 (902)
Q Consensus 161 ~yn~Li~~~~~~g~~~~A~~l~~~M~~~----g~~pd--~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~-----~~~ 229 (902)
+|+.+...|.+.|++++|+..|++..+. | .|. ..++..+...|.. |++++|...+++....... ...
T Consensus 78 ~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g-~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~ 155 (307)
T 2ifu_A 78 AFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG-TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAA 155 (307)
T ss_dssp HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHH
Confidence 7889999999999999999999987543 2 122 3577788888888 9999999998877642111 123
Q ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCCC-HHHHHHHHHHHHHcCCHHHHHHHHHHhc
Q psy767 230 FSFQLTNLLILVSSDMASAEGILTMMSQA----GLEPS-AQTYTKLMCGYAKHGDMDSVRRLLAQSG 291 (902)
Q Consensus 230 ~~~~~~~~~~~~~g~~~~A~~l~~~m~~~----g~~pd-~~ty~~LI~a~~~~g~~~~A~~lf~~m~ 291 (902)
..+..+..++...|++++|...|++.... +..++ ...|..+...+...|++++|...|++..
T Consensus 156 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 156 ELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 45666777788899999999999988763 22222 2367777788888999999999999854
No 113
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.74 E-value=0.00061 Score=61.00 Aligned_cols=120 Identities=14% Similarity=0.070 Sum_probs=97.4
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV 161 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~ 161 (902)
+...|..+...+...|++++|...|++..... +.+...+..+ ...+...|++++|...++...... +.+...
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~------a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~ 82 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELN-PANAVYFCNR------AAAYSKLGNYAGAVQDCERAICID-PAYSKA 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcC-CCCHHHHHHH------HHHHHHhhchHHHHHHHHHHHhcC-ccCHHH
Confidence 55678888889999999999999999988653 2356777777 888899999999999999887764 456788
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh
Q psy767 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210 (902)
Q Consensus 162 yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~ 210 (902)
|..+...|.+.|++++|...|++..+.. ..+...+..+..++...|++
T Consensus 83 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~-p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 83 YGRMGLALSSLNKHVEAVAYYKKALELD-PDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcC-ccchHHHHHHHHHHHHHhcC
Confidence 8899999999999999999999988764 22566777777777777664
No 114
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.74 E-value=0.00063 Score=64.19 Aligned_cols=129 Identities=6% Similarity=-0.070 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHH
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~y 162 (902)
...|..+...+...|++++|...|++..+.. +.+..++..+ ...+...|++++|...|+...... +.+...|
T Consensus 13 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~------a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~ 84 (166)
T 1a17_A 13 AEELKTQANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNR------SLAYLRTECYGYALGDATRAIELD-KKYIKGY 84 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCChHHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-cccHHHH
Confidence 4557778888888999999999998887653 2256677777 888888999999999998887764 5567788
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHH--HHHHHHHHcCChhHHHHHHHhc
Q psy767 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT--KLMCGYAKHGDMDSIKTKIPSL 220 (902)
Q Consensus 163 n~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~--~ll~a~~~~g~~~~a~~l~~~~ 220 (902)
..+..++.+.|++++|...|++...... .+...+. .+...+...|++++|...+...
T Consensus 85 ~~~a~~~~~~~~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~ 143 (166)
T 1a17_A 85 YRRAASNMALGKFRAALRDYETVVKVKP-HDKDAKMKYQECNKIVKQKAFERAIAGDEHK 143 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHHHHcccch
Confidence 8888889999999999999998887632 2444443 3333466677777777766543
No 115
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.72 E-value=0.00049 Score=62.09 Aligned_cols=121 Identities=7% Similarity=-0.094 Sum_probs=95.4
Q ss_pred CCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCC
Q psy767 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS 158 (902)
Q Consensus 79 ~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~ 158 (902)
.+.+...|..+...+.+.|++++|...|++..+.. +.+...+..+ ...|...|++++|...|+...+.. +.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l------a~~~~~~~~~~~A~~~~~~a~~~~-~~~ 83 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRN-PKDAKLYSNR------AACYTKLLEFQLALKDCEECIQLE-PTF 83 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTC-TTCHHHHHHH------HHHHTTTTCHHHHHHHHHHHHHHC-TTC
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CCcHHHHHHH------HHHHHHhccHHHHHHHHHHHHHhC-CCc
Confidence 44567889999999999999999999999988653 2266777777 888899999999999999987764 456
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcC
Q psy767 159 EGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 208 (902)
Q Consensus 159 ~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g 208 (902)
...|..+..+|.+.|++++|.+.|++..+... -+...+..+...+...|
T Consensus 84 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p-~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 84 IKGYTRKAAALEAMKDYTKAMDVYQKALDLDS-SCKEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCG-GGTHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCC-CchHHHHHHHHHHHHhc
Confidence 78899999999999999999999999887631 13345555555555444
No 116
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.70 E-value=0.00078 Score=59.70 Aligned_cols=97 Identities=15% Similarity=0.154 Sum_probs=77.4
Q ss_pred HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHH
Q psy767 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197 (902)
Q Consensus 118 ~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty 197 (902)
...|..+ ...+...|++++|.+.|+.+.... +.+...|..+...+.+.|++++|..+|+++.... ..+..++
T Consensus 9 ~~~~~~~------~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~ 80 (125)
T 1na0_A 9 AEAWYNL------GNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAW 80 (125)
T ss_dssp HHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHH------HHHHHHcCCHHHHHHHHHHHHHHC-cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CccHHHH
Confidence 4556666 888889999999999999887654 4567888889999999999999999999988764 3366778
Q ss_pred HHHHHHHHHcCChhHHHHHHHhccc
Q psy767 198 TKLMCGYAKHGDMDSIKTKIPSLKP 222 (902)
Q Consensus 198 ~~ll~a~~~~g~~~~a~~l~~~~~~ 222 (902)
..+...|...|++++|...++.+..
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 8888888888888888777776654
No 117
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.69 E-value=0.0052 Score=70.02 Aligned_cols=214 Identities=9% Similarity=0.055 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHh
Q psy767 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325 (902)
Q Consensus 246 ~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~ 325 (902)
+.+..+|+++.... +.+...|-..+.-+.+.|++++|..+|++.... |....+-..+......+..
T Consensus 196 ~Rv~~~ye~al~~~-p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~---P~~~~l~~~y~~~~e~~~~---------- 261 (493)
T 2uy1_A 196 SRMHFIHNYILDSF-YYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM---SDGMFLSLYYGLVMDEEAV---------- 261 (493)
T ss_dssp HHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCSSHHHHHHHHHTTCTHH----------
T ss_pred HHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC---CCcHHHHHHHHhhcchhHH----------
Confidence 45677888887753 566888988888889999999999999986655 3222222222222111111
Q ss_pred hhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHcCCCC-CcccHHHHHHHHHHcCChHHHHHHHHHc
Q psy767 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL-VNGDYLDIIHALAVSGHGEYIDEIISKI 404 (902)
Q Consensus 326 ~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m~~~~-~~~~~~~li~~~~~~g~~~~A~~l~~~m 404 (902)
+..+...+.... .+.+. ....+ ....|...+..+.+.+..+.|.++|++.
T Consensus 262 -----------------------~~~l~~~~~~~~-~~~~~-----~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A 312 (493)
T 2uy1_A 262 -----------------------YGDLKRKYSMGE-AESAE-----KVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL 312 (493)
T ss_dssp -----------------------HHHHHHHTC----------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred -----------------------HHHHHHHHHhhc-cchhh-----hhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 111111110000 00000 00000 0011555555555566677777777776
Q ss_pred ccCCCCCCCHHH-HHHH-HHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHhc
Q psy767 405 QPGVGYSADAAN-HIYH-LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINK 482 (902)
Q Consensus 405 ~~~~g~~pd~~t-~i~~-l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k~ 482 (902)
...+..+..+. +... +...++++.|..+|+...+.++-.|. . ....+....+.
T Consensus 313 -~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~---~---------------------~~~yid~e~~~ 367 (493)
T 2uy1_A 313 -GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTL---L---------------------KEEFFLFLLRI 367 (493)
T ss_dssp -TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHH---H---------------------HHHHHHHHHHH
T ss_pred -hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHH---H---------------------HHHHHHHHHHc
Confidence 31222111111 0111 11233577888888777765422111 0 11233445677
Q ss_pred CChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy767 483 GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTD 535 (902)
Q Consensus 483 g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~ 535 (902)
|+.+.|..+|+.... +...|...+..-...|. .+.+..+++++.+
T Consensus 368 ~~~~~aR~l~er~~k-------~~~lw~~~~~fE~~~G~-~~~~r~v~~~~~~ 412 (493)
T 2uy1_A 368 GDEENARALFKRLEK-------TSRMWDSMIEYEFMVGS-MELFRELVDQKMD 412 (493)
T ss_dssp TCHHHHHHHHHHSCC-------BHHHHHHHHHHHHHHSC-HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHCCC-HHHHHHHHHHHHH
Confidence 899999999988731 45678888887788898 8889888888653
No 118
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.67 E-value=0.002 Score=64.29 Aligned_cols=164 Identities=14% Similarity=0.041 Sum_probs=130.3
Q ss_pred CCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcC----CHHHHHHHHHHhhhCCCC
Q psy767 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG----NIEGATKILEFMRDKTFP 156 (902)
Q Consensus 81 pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g----~~~~A~~l~~~m~~~~~~ 156 (902)
-+...+..+-..|...+++++|+..|++..+.| +...+..+ -..|.. + ++++|...|+...+.|
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g---~~~a~~~l------g~~y~~-~g~~~~~~~A~~~~~~A~~~g-- 83 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG---DGDALALL------AQLKIR-NPQQADYPQARQLAEKAVEAG-- 83 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT---CHHHHHHH------HHHTTS-STTSCCHHHHHHHHHHHHHTT--
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC---CHHHHHHH------HHHHHc-CCCCCCHHHHHHHHHHHHHCC--
Confidence 367888889999999999999999999998876 56666666 666776 6 8999999999998877
Q ss_pred CCHHHHHHHHHHHHh----CCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHH----cCChhHHHHHHHhcccCCCcc
Q psy767 157 ISEGVFNALIYGHSQ----ANDMASAEGILTMMSQAGLE-PSAQTYTKLMCGYAK----HGDMDSIKTKIPSLKPQSELF 227 (902)
Q Consensus 157 p~~~~yn~Li~~~~~----~g~~~~A~~l~~~M~~~g~~-pd~~ty~~ll~a~~~----~g~~~~a~~l~~~~~~~~~~~ 227 (902)
+...+..|-..|.. .+++++|+.+|++..+.|.. .+...+..|-..|.. .++.++|...|+.....+.
T Consensus 84 -~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~-- 160 (212)
T 3rjv_A 84 -SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSLSR-- 160 (212)
T ss_dssp -CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHTSC--
T ss_pred -CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHcCC--
Confidence 45788888888877 88999999999999887521 026788888888888 8899999999999877622
Q ss_pred chhhHHHHHHHHHh-cC-----CHHHHHHHHHHHHHCC
Q psy767 228 LCFSFQLTNLLILV-SS-----DMASAEGILTMMSQAG 259 (902)
Q Consensus 228 ~~~~~~~~~~~~~~-~g-----~~~~A~~l~~~m~~~g 259 (902)
+......+..++.. .| +.++|...|+...+.|
T Consensus 161 ~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g 198 (212)
T 3rjv_A 161 TGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEG 198 (212)
T ss_dssp TTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcC
Confidence 22244445555543 34 8999999999988776
No 119
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.67 E-value=0.0098 Score=62.80 Aligned_cols=223 Identities=7% Similarity=-0.071 Sum_probs=146.2
Q ss_pred HHCC-CchHHHHHHHHHHHCCCCCC-HHHHHHHHHhHHHHHHHHHcC--CHHHHHHHHHHhhhCCCCCCHHHHHHHHHHH
Q psy767 94 LDNE-HTFSPTDFLAKLESQGIEPN-RVTYQQLISNSKLISKYCQDG--NIEGATKILEFMRDKTFPISEGVFNALIYGH 169 (902)
Q Consensus 94 ~~~g-~~~~A~~l~~~M~~~g~~pd-~~t~~~ll~~~~li~~~~~~g--~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~ 169 (902)
.+.| ..++|+.+++.+... .|+ ...|+.- -..+...| +++++++.++.+...+ |-+..+|+.--..+
T Consensus 43 ~~~~e~s~~aL~~t~~~L~~--nP~~~taWn~R------~~~L~~l~~~~~~eeL~~~~~~L~~n-Pk~y~aW~~R~~iL 113 (306)
T 3dra_A 43 MKAEEYSERALHITELGINE--LASHYTIWIYR------FNILKNLPNRNLYDELDWCEEIALDN-EKNYQIWNYRQLII 113 (306)
T ss_dssp HHTTCCSHHHHHHHHHHHHH--CTTCHHHHHHH------HHHHHTCTTSCHHHHHHHHHHHHHHC-TTCCHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHH--CcHHHHHHHHH------HHHHHHcccccHHHHHHHHHHHHHHC-cccHHHHHHHHHHH
Confidence 3444 446899999999865 444 4456666 66666777 9999999999998765 44557777655555
Q ss_pred ----HhC---CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChh--HHHHHHHhcccCCCccchhhHHHHHHHHH
Q psy767 170 ----SQA---NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD--SIKTKIPSLKPQSELFLCFSFQLTNLLIL 240 (902)
Q Consensus 170 ----~~~---g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~--~a~~l~~~~~~~~~~~~~~~~~~~~~~~~ 240 (902)
... +++++++++++.+.+.. .-|..+|+.---.+.+.|.++ ++.+.++.+...+.. +...+..-..++.
T Consensus 114 ~~~~~~l~~~~~~~~EL~~~~~~l~~~-pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~-N~sAW~~R~~ll~ 191 (306)
T 3dra_A 114 GQIMELNNNDFDPYREFDILEAMLSSD-PKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLK-NNSAWSHRFFLLF 191 (306)
T ss_dssp HHHHHHTTTCCCTHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHH
T ss_pred HHHHHhccccCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHH
Confidence 555 78999999999999875 337788888777788888887 888887777764432 2223333333333
Q ss_pred hcCC------HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHH-HHHHHhccCCCCCCHHHHHHHHHHcCCcc
Q psy767 241 VSSD------MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR-RLLAQSGSSLVNGDYLDIIHALAVSGHGE 313 (902)
Q Consensus 241 ~~g~------~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~-~lf~~m~~~~~~p~~~tl~~~l~~~~~~~ 313 (902)
..+. ++++.+.++.+.... +-|...|+-+-..+.+.|+..+++ ++..+...
T Consensus 192 ~l~~~~~~~~~~eEl~~~~~aI~~~-p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~--------------------- 249 (306)
T 3dra_A 192 SKKHLATDNTIDEELNYVKDKIVKC-PQNPSTWNYLLGIHERFDRSITQLEEFSLQFVD--------------------- 249 (306)
T ss_dssp SSGGGCCHHHHHHHHHHHHHHHHHC-SSCHHHHHHHHHHHHHTTCCGGGGHHHHHTTEE---------------------
T ss_pred hccccchhhhHHHHHHHHHHHHHhC-CCCccHHHHHHHHHHhcCCChHHHHHHHHHHHh---------------------
Confidence 4444 666777766666554 556666776666666666643322 23332110
Q ss_pred cHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHcC
Q psy767 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373 (902)
Q Consensus 314 ~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m~ 373 (902)
.. ..-..+...+..+.++|.+.|+.++|.++++.+.
T Consensus 250 -----------------------~~-~~~~~s~~al~~la~~~~~~~~~~~A~~~~~~l~ 285 (306)
T 3dra_A 250 -----------------------LE-KDQVTSSFALETLAKIYTQQKKYNESRTVYDLLK 285 (306)
T ss_dssp -----------------------GG-GTEESCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -----------------------cc-CCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence 00 0113366777777888888888888888888754
No 120
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.66 E-value=0.0024 Score=67.31 Aligned_cols=160 Identities=9% Similarity=-0.080 Sum_probs=120.2
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCC-CCCCH----HHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCC-CC----HHHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKT-FPISE----GVFNALIYGHSQANDMASAEGILTMMSQAGLE-PS----AQTYTKL 200 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~-~~p~~----~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~-pd----~~ty~~l 200 (902)
+..+.+.|++++|..+++...... ..|+. ..|..+...+...|++++|+..|++....... ++ ..+|+.+
T Consensus 82 i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~l 161 (293)
T 3u3w_A 82 VIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAI 161 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 677889999999999999987643 22332 13445667777788999999999999874322 23 3368999
Q ss_pred HHHHHHcCChhHHHHHHHhccc------CCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHH----CCCCCC-HHHHHH
Q psy767 201 MCGYAKHGDMDSIKTKIPSLKP------QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ----AGLEPS-AQTYTK 269 (902)
Q Consensus 201 l~a~~~~g~~~~a~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~----~g~~pd-~~ty~~ 269 (902)
...|...|++++|...++.... .........+..+..++...|++++|...+++..+ .+..+. ..+|..
T Consensus 162 g~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 241 (293)
T 3u3w_A 162 ANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQ 241 (293)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 9999999999999999988873 12222334666677778889999999999987764 232333 678889
Q ss_pred HHHHHHHcCC-HHHHHHHHHHh
Q psy767 270 LMCGYAKHGD-MDSVRRLLAQS 290 (902)
Q Consensus 270 LI~a~~~~g~-~~~A~~lf~~m 290 (902)
+-..|.+.|+ +++|.+.|++.
T Consensus 242 lg~~~~~~g~~~~~A~~~~~~A 263 (293)
T 3u3w_A 242 RGECLRKLEYEEAEIEDAYKKA 263 (293)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCcHHHHHHHHHHH
Confidence 9999999995 69999998873
No 121
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=97.66 E-value=9.2e-05 Score=69.66 Aligned_cols=118 Identities=8% Similarity=-0.070 Sum_probs=83.7
Q ss_pred HHHCCCchHHHHHHHHHHHCCCCCC-HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHh
Q psy767 93 YLDNEHTFSPTDFLAKLESQGIEPN-RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171 (902)
Q Consensus 93 ~~~~g~~~~A~~l~~~M~~~g~~pd-~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~ 171 (902)
+...|++++|+..+...... .|+ ...+-.+ ...|.+.|++++|.+.|+...+.+ |-+..+|..+-.+|.+
T Consensus 7 ~~~~~~~e~ai~~~~~a~~~--~p~~~~~~~~l------a~~y~~~~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~ 77 (150)
T 4ga2_A 7 RRSKADVERYIASVQGSTPS--PRQKSIKGFYF------AKLYYEAKEYDLAKKYICTYINVQ-ERDPKAHRFLGLLYEL 77 (150)
T ss_dssp CCCHHHHHHHHHHHHHHSCS--HHHHHTTHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHH
T ss_pred HHHcChHHHHHHHHHHhccc--CcccHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHH
Confidence 33456677777777766532 332 3334455 777888888888888888887765 5567888888888888
Q ss_pred CCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHcCChhHHHHH-HHhcc
Q psy767 172 ANDMASAEGILTMMSQAGLEP-SAQTYTKLMCGYAKHGDMDSIKTK-IPSLK 221 (902)
Q Consensus 172 ~g~~~~A~~l~~~M~~~g~~p-d~~ty~~ll~a~~~~g~~~~a~~l-~~~~~ 221 (902)
.|++++|+..|+...+. .| +..+|..+...|.+.|+++++.+. ++...
T Consensus 78 ~~~~~~A~~~~~~al~~--~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al 127 (150)
T 4ga2_A 78 EENTDKAVECYRRSVEL--NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAA 127 (150)
T ss_dssp TTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 88888888888888876 34 466788888888888887765443 34443
No 122
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.63 E-value=0.00097 Score=62.87 Aligned_cols=90 Identities=11% Similarity=0.072 Sum_probs=68.5
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~ 210 (902)
...+...|+++.|...|+...... +.+...|..+...+...|++++|+..|++..... ..+...|..+..++...|++
T Consensus 20 a~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~~~~~~~~ 97 (166)
T 1a17_A 20 ANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRAASNMALGKF 97 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHhccH
Confidence 777788899999999888877654 4467788888888888899999999888887763 23566777777777777877
Q ss_pred hHHHHHHHhccc
Q psy767 211 DSIKTKIPSLKP 222 (902)
Q Consensus 211 ~~a~~l~~~~~~ 222 (902)
++|...++....
T Consensus 98 ~~A~~~~~~a~~ 109 (166)
T 1a17_A 98 RAALRDYETVVK 109 (166)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777666665543
No 123
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.60 E-value=0.014 Score=61.31 Aligned_cols=172 Identities=6% Similarity=-0.097 Sum_probs=95.9
Q ss_pred HHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCC---CCC--HH
Q psy767 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTF---PIS--EG 160 (902)
Q Consensus 86 yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~---~p~--~~ 160 (902)
+...+..+...|++++|.+.+.+..+.... +......+.....+...+...|++++|...++....... .+. ..
T Consensus 78 l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 156 (293)
T 2qfc_A 78 FKDQVIMLCKQKRYKEIYNKVWNELKKEEY-HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLY 156 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhccccC-ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 344555666777777777777766654322 111111110011114455566777777777766543211 111 34
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHC-CCCCC-----HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHH
Q psy767 161 VFNALIYGHSQANDMASAEGILTMMSQA-GLEPS-----AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234 (902)
Q Consensus 161 ~yn~Li~~~~~~g~~~~A~~l~~~M~~~-g~~pd-----~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~ 234 (902)
+|+.+...|...|++++|+..|++..+. ...|+ ..+|..+...|...|++++|...+++...
T Consensus 157 ~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~------------ 224 (293)
T 2qfc_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE------------ 224 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHH------------
Confidence 6677777777777777777777766521 00112 14566666666777777766666554322
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHcCCHHHH-HHHHHH
Q psy767 235 TNLLILVSSDMASAEGILTMMSQAGLEPS-AQTYTKLMCGYAKHGDMDSV-RRLLAQ 289 (902)
Q Consensus 235 ~~~~~~~~g~~~~A~~l~~~m~~~g~~pd-~~ty~~LI~a~~~~g~~~~A-~~lf~~ 289 (902)
+. ...+.... ..+|..+-..|.+.|++++| ...|++
T Consensus 225 ----------------~~---~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~ 262 (293)
T 2qfc_A 225 ----------------IS---CRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKK 262 (293)
T ss_dssp ----------------HH---HHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred ----------------HH---HhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 11 11121222 56788888899999999999 666765
No 124
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.59 E-value=0.0018 Score=68.18 Aligned_cols=165 Identities=6% Similarity=-0.062 Sum_probs=120.1
Q ss_pred HHHHHHHHHHCCCchHHHHHHHHHHHCC-CCCCHH----HHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCC-CC-
Q psy767 86 YNALLRVYLDNEHTFSPTDFLAKLESQG-IEPNRV----TYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFP-IS- 158 (902)
Q Consensus 86 yn~li~~~~~~g~~~~A~~l~~~M~~~g-~~pd~~----t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~-p~- 158 (902)
+...+..+...|++++|..++++..+.. ..|+.. .+..+ ...+...|++++|...|+........ ++
T Consensus 78 l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l------~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~ 151 (293)
T 3u3w_A 78 FKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYV------AAYVLKKVDYEYCILELKKLLNQQLTGIDV 151 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH------HHHHTTSSCHHHHHHHHHHHHHTCCCCSCT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHH------HHHHHcccCHHHHHHHHHHHHHHhcccccH
Confidence 3344778899999999999999988643 222321 12223 66677788999999999998774322 22
Q ss_pred ---HHHHHHHHHHHHhCCCHHHHHHHHHHHHH----C-CCCCCH-HHHHHHHHHHHHcCChhHHHHHHHhcccC----CC
Q psy767 159 ---EGVFNALIYGHSQANDMASAEGILTMMSQ----A-GLEPSA-QTYTKLMCGYAKHGDMDSIKTKIPSLKPQ----SE 225 (902)
Q Consensus 159 ---~~~yn~Li~~~~~~g~~~~A~~l~~~M~~----~-g~~pd~-~ty~~ll~a~~~~g~~~~a~~l~~~~~~~----~~ 225 (902)
..+|+.+...|...|++++|+..|++..+ . +..+.. .+|..+...|.+.|++++|...++..... +.
T Consensus 152 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~ 231 (293)
T 3u3w_A 152 YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINS 231 (293)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTB
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCc
Confidence 23699999999999999999999999874 1 222222 37888999999999999999998877542 22
Q ss_pred -ccchhhHHHHHHHHHhcC-CHHHHHHHHHHHH
Q psy767 226 -LFLCFSFQLTNLLILVSS-DMASAEGILTMMS 256 (902)
Q Consensus 226 -~~~~~~~~~~~~~~~~~g-~~~~A~~l~~~m~ 256 (902)
......+..+..++...| ..++|...+++..
T Consensus 232 ~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al 264 (293)
T 3u3w_A 232 MALIGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 223456677777777888 5699998887654
No 125
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.58 E-value=0.00046 Score=67.79 Aligned_cols=155 Identities=10% Similarity=-0.018 Sum_probs=111.4
Q ss_pred HHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHHcCC
Q psy767 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA----GLEP-SAQTYTKLMCGYAKHGD 209 (902)
Q Consensus 135 ~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~----g~~p-d~~ty~~ll~a~~~~g~ 209 (902)
...|++++|.++++.+.. .......+++.+...|...|++++|...|++.... |..| ...++..+...|...|+
T Consensus 3 ~~~g~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 81 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLA-HPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGN 81 (203)
T ss_dssp ----CHHHHHHHHHHHHT-STTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCC
Confidence 467999999996655543 22235678899999999999999999999988662 2222 23577788889999999
Q ss_pred hhHHHHHHHhcccC----CCc--cchhhHHHHHHHHHhcCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHHcC
Q psy767 210 MDSIKTKIPSLKPQ----SEL--FLCFSFQLTNLLILVSSDMASAEGILTMMSQA----GLEP-SAQTYTKLMCGYAKHG 278 (902)
Q Consensus 210 ~~~a~~l~~~~~~~----~~~--~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~----g~~p-d~~ty~~LI~a~~~~g 278 (902)
+++|...+.+.... +.. .....+..+..++...|++++|...+++.... +... -..++..+...|...|
T Consensus 82 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 161 (203)
T 3gw4_A 82 WDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEK 161 (203)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCc
Confidence 99999988877553 211 23345566667777899999999999887642 2111 1334678888999999
Q ss_pred CHHHHHHHHHHh
Q psy767 279 DMDSVRRLLAQS 290 (902)
Q Consensus 279 ~~~~A~~lf~~m 290 (902)
++++|.+.|++.
T Consensus 162 ~~~~A~~~~~~a 173 (203)
T 3gw4_A 162 NLLEAQQHWLRA 173 (203)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999999874
No 126
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.57 E-value=0.00042 Score=66.76 Aligned_cols=122 Identities=11% Similarity=0.030 Sum_probs=63.6
Q ss_pred ccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHH
Q psy767 53 WCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132 (902)
Q Consensus 53 ~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~ 132 (902)
+...|++++|...+..... --+.+...|..+...|...|++++|...|++..+... .+...+..+ ..
T Consensus 20 ~~~~~~~~~A~~~~~~al~------~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~l------a~ 86 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIR------ANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRG-ENAELYAAL------AT 86 (177)
T ss_dssp CC-----CCCCHHHHHHHH------HCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHC-SCHHHHHHH------HH
T ss_pred hhhccCHHHHHHHHHHHHH------hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC-CCHHHHHHH------HH
Confidence 3445555555555555444 1122445566666666666666666666666554321 134444444 44
Q ss_pred H-HHHcCCH--HHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC
Q psy767 133 K-YCQDGNI--EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188 (902)
Q Consensus 133 ~-~~~~g~~--~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~ 188 (902)
+ +...|++ ++|...|+.....+ +-+...|..+...|...|++++|...|++..+.
T Consensus 87 ~l~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 87 VLYYQASQHMTAQTRAMIDKALALD-SNEITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHTTTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHhcCCcchHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 4 4455665 66666666655543 334455555666666666666666666666554
No 127
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.57 E-value=0.0011 Score=60.12 Aligned_cols=101 Identities=8% Similarity=-0.048 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHH
Q psy767 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163 (902)
Q Consensus 84 ~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn 163 (902)
..|...-..|.+.|++++|+..|++..+.. +.+...|..+ ..+|.+.|++++|...|+...+.+ +.+...|.
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~------~~~~~~~~~~~~A~~~~~~al~~~-p~~~~a~~ 85 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKRD-PENAILYSNR------AACLTKLMEFQRALDDCDTCIRLD-SKFIKGYI 85 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHH------hhHHHhhccHHHHHHHHHHHHHhh-hhhhHHHH
Confidence 557778888889999999999998887653 2366777777 888888999999999998887765 55678888
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHCCCCCCH
Q psy767 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSA 194 (902)
Q Consensus 164 ~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~ 194 (902)
.+..+|...|++++|++.|+...+. .|+.
T Consensus 86 ~lg~~~~~~~~~~~A~~~~~~al~l--~P~~ 114 (126)
T 4gco_A 86 RKAACLVAMREWSKAQRAYEDALQV--DPSN 114 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH--CTTC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHH--CcCC
Confidence 8889999999999999999988876 4543
No 128
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=97.56 E-value=8.6e-05 Score=69.87 Aligned_cols=140 Identities=9% Similarity=0.006 Sum_probs=93.9
Q ss_pred ccCCCCCCcCcccccCccccccCCCCCCC-CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHH
Q psy767 53 WCSEPSLGPGNLPCEDPFSVHTGELDVPL-DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLI 131 (902)
Q Consensus 53 ~~~~g~~~~A~~~f~~~~~~~~~~~g~~p-d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li 131 (902)
+...|+++.|...+..... ..| +...|-.+-..|.+.|++++|.+.|++..+... -+..+|..+ .
T Consensus 7 ~~~~~~~e~ai~~~~~a~~-------~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p-~~~~a~~~l------g 72 (150)
T 4ga2_A 7 RRSKADVERYIASVQGSTP-------SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQE-RDPKAHRFL------G 72 (150)
T ss_dssp CCCHHHHHHHHHHHHHHSC-------SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHH------H
T ss_pred HHHcChHHHHHHHHHHhcc-------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHH------H
Confidence 3444455555544444443 112 223455677778888888888888888876532 256777777 8
Q ss_pred HHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHH-HHHHHHCCCCC-CHHHHHHHHHHHHHcCC
Q psy767 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI-LTMMSQAGLEP-SAQTYTKLMCGYAKHGD 209 (902)
Q Consensus 132 ~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l-~~~M~~~g~~p-d~~ty~~ll~a~~~~g~ 209 (902)
.+|.+.|++++|...|+...+.+ |-+...|..+...|.+.|+.++|.+. ++...+. .| +..+|......+...|+
T Consensus 73 ~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l--~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 73 LLYELEENTDKAVECYRRSVELN-PTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKL--FPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH--STTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHcCchHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh--CcCCHHHHHHHHHHHHHhCc
Confidence 88888888888888888887764 44677888888888888888766654 4666664 34 45566666666655553
No 129
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.55 E-value=0.00036 Score=75.43 Aligned_cols=131 Identities=11% Similarity=-0.075 Sum_probs=107.4
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCC--------------HHHHHHHHHhHHHHHHHHHcCCHHHHHHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPN--------------RVTYQQLISNSKLISKYCQDGNIEGATKIL 147 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd--------------~~t~~~ll~~~~li~~~~~~g~~~~A~~l~ 147 (902)
+...|..+-..|.+.|++++|...|++..+...... ...|..+ ..+|.+.|++++|...|
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nl------a~~~~~~g~~~~A~~~~ 219 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNL------AMCHLKLQAFSAAIESC 219 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHH------HHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHH------HHHHHHcCCHHHHHHHH
Confidence 456788899999999999999999999887542221 4677777 88999999999999999
Q ss_pred HHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHH-HHHHHhc
Q psy767 148 EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-KTKIPSL 220 (902)
Q Consensus 148 ~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a-~~l~~~~ 220 (902)
+...+.+ +.+...|..+..+|...|++++|+..|++..+.. .-+...+..+..++...|+.+++ ...+..|
T Consensus 220 ~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~ 291 (336)
T 1p5q_A 220 NKALELD-SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLY-PNNKAAKTQLAVCQQRIRRQLAREKKLYANM 291 (336)
T ss_dssp HHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988875 5678899999999999999999999999998863 22566888888888888888877 3444444
No 130
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.55 E-value=0.0007 Score=63.63 Aligned_cols=104 Identities=8% Similarity=-0.061 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV 161 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~ 161 (902)
+...|..+-..+.+.|++++|...|++...... -+...|..+ -.+|...|++++|...|+.....+ |-+...
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P-~~~~~~~~l------g~~~~~~g~~~~Ai~~~~~al~l~-P~~~~~ 106 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDF-YNVDYIMGL------AAIYQIKEQFQQAADLYAVAFALG-KNDYTP 106 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHS-SSCCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHH------HHHHHHHccHHHHHHHHHHHHhhC-CCCcHH
Confidence 345577777778888888888888888776532 256667777 778888888888888888877654 445677
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHH
Q psy767 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195 (902)
Q Consensus 162 yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ 195 (902)
|..+-.+|.+.|++++|+..|+...+. .|+..
T Consensus 107 ~~~lg~~~~~lg~~~eA~~~~~~al~l--~~~~~ 138 (151)
T 3gyz_A 107 VFHTGQCQLRLKAPLKAKECFELVIQH--SNDEK 138 (151)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH--CCCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCHH
Confidence 888888888888888888888888775 45543
No 131
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.54 E-value=0.0032 Score=65.92 Aligned_cols=191 Identities=12% Similarity=-0.039 Sum_probs=128.9
Q ss_pred CCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHH
Q psy767 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG 160 (902)
Q Consensus 81 pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~ 160 (902)
.+...|..+...+.+.|++++|...|++..+... -+...|..+ ...|.+.|++++|...++...+.+ +-+..
T Consensus 2 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~l------a~~~~~~~~~~~A~~~~~~al~~~-p~~~~ 73 (281)
T 2c2l_A 2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNP-LVAVYYTNR------ALCYLKMQQPEQALADCRRALELD-GQSVK 73 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-CCHHHHHHH------HHHHHHTTCHHHHHHHHHHHTTSC-TTCHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-ccHHHHHHH------HHHHHHhcCHHHHHHHHHHHHHhC-CCCHH
Confidence 3567788899999999999999999999887532 267778888 899999999999999999988765 55778
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHCCC----CCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHH
Q psy767 161 VFNALIYGHSQANDMASAEGILTMMSQAGL----EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236 (902)
Q Consensus 161 ~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~----~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~ 236 (902)
.|..+..+|...|++++|+..|+...+.+. ..+...+..+ ...+...+... -. .....+......+.
T Consensus 74 ~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~--~~~~~~~~~~~---~~----~~~~~~~~i~~~l~ 144 (281)
T 2c2l_A 74 AHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSAL--RIAKKKRWNSI---EE----RRIHQESELHSYLT 144 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHH--HHHHHHHHHHH---HH----TCCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHH--HHHHHHHHHHH---HH----HHHhhhHHHHHHHH
Confidence 899999999999999999999998876421 1111222222 22222222221 11 11122222222222
Q ss_pred HHHHhcCCHHHHHHHHHHHHHCCCCCCH-HHHHHHHHHHHHc-CCHHHHHHHHHHhcc
Q psy767 237 LLILVSSDMASAEGILTMMSQAGLEPSA-QTYTKLMCGYAKH-GDMDSVRRLLAQSGS 292 (902)
Q Consensus 237 ~~~~~~g~~~~A~~l~~~m~~~g~~pd~-~ty~~LI~a~~~~-g~~~~A~~lf~~m~~ 292 (902)
.++ .|+.+.|.+.++...+. .|+. .....+-..+.+. +.+++|.++|.+...
T Consensus 145 ~l~--~~~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a~~ 198 (281)
T 2c2l_A 145 RLI--AAERERELEECQRNHEG--HEDDGHIRAQQACIEAKHDKYMADMDELFSQVDE 198 (281)
T ss_dssp HHH--HHHHHHHHTTTSGGGTT--TSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred HHH--HHHHHHHHHHHHhhhcc--ccchhhhhhHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 222 57888888888777654 4554 3444444455555 668899999998755
No 132
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.53 E-value=0.00076 Score=66.15 Aligned_cols=156 Identities=8% Similarity=-0.009 Sum_probs=109.9
Q ss_pred HHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhh----CCCC-CCHHHHHHHHHH
Q psy767 94 LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRD----KTFP-ISEGVFNALIYG 168 (902)
Q Consensus 94 ~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~----~~~~-p~~~~yn~Li~~ 168 (902)
...|++++|.+.++.+.. .......++..+ ...+...|++++|...+++... .+.+ ....+++.+-..
T Consensus 3 ~~~g~~~~A~~~~~~~~~-~~~~~~~~~~~l------~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~ 75 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLA-HPATASGARFML------GYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMV 75 (203)
T ss_dssp ----CHHHHHHHHHHHHT-STTTHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhcC-ChHHHHHHHHHH------HHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Confidence 467899999996655543 222345567777 8889999999999999988754 2222 234678888899
Q ss_pred HHhCCCHHHHHHHHHHHHHC----CCCC--CHHHHHHHHHHHHHcCChhHHHHHHHhcccC----CCc-cchhhHHHHHH
Q psy767 169 HSQANDMASAEGILTMMSQA----GLEP--SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ----SEL-FLCFSFQLTNL 237 (902)
Q Consensus 169 ~~~~g~~~~A~~l~~~M~~~----g~~p--d~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~----~~~-~~~~~~~~~~~ 237 (902)
|...|++++|...|++.... |-.| ....+..+...+...|++++|...+++.... +.. .....+..+..
T Consensus 76 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 155 (203)
T 3gw4_A 76 ERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGD 155 (203)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 99999999999999887653 2121 2346778888999999999999998887542 111 12233456666
Q ss_pred HHHhcCCHHHHHHHHHHHH
Q psy767 238 LILVSSDMASAEGILTMMS 256 (902)
Q Consensus 238 ~~~~~g~~~~A~~l~~~m~ 256 (902)
++...|++++|...+++..
T Consensus 156 ~~~~~g~~~~A~~~~~~al 174 (203)
T 3gw4_A 156 LAQQEKNLLEAQQHWLRAR 174 (203)
T ss_dssp HHHHTTCHHHHHHHHHHHH
T ss_pred HHHHCcCHHHHHHHHHHHH
Confidence 6777999999999888765
No 133
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.49 E-value=0.0013 Score=58.70 Aligned_cols=90 Identities=10% Similarity=-0.029 Sum_probs=66.4
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~ 210 (902)
...+...|+++.|...|+...... +.+...|..+...+...|++++|...|+...... ..+...+..+...+...|++
T Consensus 19 ~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 96 (131)
T 2vyi_A 19 GNEQMKVENFEAAVHFYGKAIELN-PANAVYFCNRAAAYSKLGNYAGAVQDCERAICID-PAYSKAYGRMGLALSSLNKH 96 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHccCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcC-ccCHHHHHHHHHHHHHhCCH
Confidence 777778888888888888876654 4466778888888888888888888888887753 22456777777777777777
Q ss_pred hHHHHHHHhccc
Q psy767 211 DSIKTKIPSLKP 222 (902)
Q Consensus 211 ~~a~~l~~~~~~ 222 (902)
++|...++....
T Consensus 97 ~~A~~~~~~~~~ 108 (131)
T 2vyi_A 97 VEAVAYYKKALE 108 (131)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 776666665443
No 134
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.48 E-value=0.00062 Score=63.72 Aligned_cols=98 Identities=10% Similarity=-0.068 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHH
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~y 162 (902)
...|..+...+.+.|++++|...|+...... +.+...|..+ -.+|...|++++|...|+.....+ +.+...|
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l------g~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~ 92 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVLD-HYDSRFFLGL------GACRQAMGQYDLAIHSYSYGAVMD-IXEPRFP 92 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHcC-cccHHHHHHH------HHHHHHHhhHHHHHHHHHHHHhcC-CCCchHH
Confidence 3445556666667777777777777666542 1245555555 666666777777777776665543 3345666
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHC
Q psy767 163 NALIYGHSQANDMASAEGILTMMSQA 188 (902)
Q Consensus 163 n~Li~~~~~~g~~~~A~~l~~~M~~~ 188 (902)
..+..+|...|++++|...|+...+.
T Consensus 93 ~~lg~~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 93 FHAAECLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 66666777777777777777666553
No 135
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.45 E-value=0.0034 Score=54.75 Aligned_cols=100 Identities=11% Similarity=-0.008 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV 161 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~ 161 (902)
+...|..+...+...|++++|...|++..... +.+...+..+ ...+...|++++|...++.....+ +.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~------a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~ 74 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLD-PHNHVLYSNR------SAAYAKKGDYQKAYEDGCKTVDLK-PDWGKG 74 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCcHHHHHHH------HHHHHhhccHHHHHHHHHHHHHhC-cccHHH
Confidence 45667778888888888888888888887653 2256666666 777888888888888888877654 445677
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHCC
Q psy767 162 FNALIYGHSQANDMASAEGILTMMSQAG 189 (902)
Q Consensus 162 yn~Li~~~~~~g~~~~A~~l~~~M~~~g 189 (902)
|..+..++...|++++|.+.|++..+.+
T Consensus 75 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 102 (118)
T 1elw_A 75 YSRKAAALEFLNRFEEAKRTYEEGLKHE 102 (118)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHcC
Confidence 8888888888888888888888887753
No 136
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.0022 Score=57.57 Aligned_cols=98 Identities=9% Similarity=-0.007 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHH
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~y 162 (902)
...|..+...+.+.|++++|...|++..+.. +.+...|..+ ..+|.+.|++++|...|+...+.+ +-+...|
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~------a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~ 75 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNR------AAALAKLMSFPEAIADCNKAIEKD-PNFVRAY 75 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHH------HHHHHHhcCHHHHHHHHHHHHHhC-CCcHHHH
Confidence 4567777788888888888988888887653 2256777777 888888888888888888887765 4567788
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHC
Q psy767 163 NALIYGHSQANDMASAEGILTMMSQA 188 (902)
Q Consensus 163 n~Li~~~~~~g~~~~A~~l~~~M~~~ 188 (902)
..+..++...|++++|...|++..+.
T Consensus 76 ~~lg~~~~~~~~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 76 IRKATAQIAVKEYASALETLDAARTK 101 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence 88888888888888888888888765
No 137
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.43 E-value=0.00082 Score=66.15 Aligned_cols=159 Identities=6% Similarity=-0.132 Sum_probs=106.7
Q ss_pred HhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCC-CC-----------
Q psy767 50 NSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE-PN----------- 117 (902)
Q Consensus 50 ~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~-pd----------- 117 (902)
+......|+++.+...|+..... .......|..+...+...|++++|...|++..+.... |+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 84 (198)
T 2fbn_A 11 SSGRENLYFQGAKKSIYDYTDEE------KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKK 84 (198)
T ss_dssp -----------CCCSGGGCCHHH------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHH
T ss_pred hhhhhhhhhccccCchhhCCHHH------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 44555667888888888766541 1113456788888899999999999999998874321 11
Q ss_pred ---HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCH
Q psy767 118 ---RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194 (902)
Q Consensus 118 ---~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~ 194 (902)
...|..+ ..+|.+.|++++|...++...... +.+...|..+..+|...|++++|+..|+...+.. .-+.
T Consensus 85 ~~~~~~~~~l------a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~ 156 (198)
T 2fbn_A 85 NIEISCNLNL------ATCYNKNKDYPKAIDHASKVLKID-KNNVKALYKLGVANMYFGFLEEAKENLYKAASLN-PNNL 156 (198)
T ss_dssp HHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-TTCH
T ss_pred HHHHHHHHHH------HHHHHHhcCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCcH
Confidence 2566666 888899999999999999988764 5677889999999999999999999999988763 2255
Q ss_pred HHHHHHHHHHHHcCChhHHH-HHHHhccc
Q psy767 195 QTYTKLMCGYAKHGDMDSIK-TKIPSLKP 222 (902)
Q Consensus 195 ~ty~~ll~a~~~~g~~~~a~-~l~~~~~~ 222 (902)
..+..+..++...++..++. ..+..+..
T Consensus 157 ~~~~~l~~~~~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 157 DIRNSYELCVNKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHHHHHHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 67777777777777666655 44444433
No 138
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.42 E-value=0.0014 Score=58.91 Aligned_cols=98 Identities=10% Similarity=-0.012 Sum_probs=76.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHH
Q psy767 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196 (902)
Q Consensus 117 d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t 196 (902)
+...|..+ ...+.+.|++++|...|+...... +.+...|..+...|...|++++|+..|++..+.. ..+...
T Consensus 15 ~~~~~~~~------~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~ 86 (133)
T 2lni_A 15 LALMVKNK------GNECFQKGDYPQAMKHYTEAIKRN-PKDAKLYSNRAACYTKLLEFQLALKDCEECIQLE-PTFIKG 86 (133)
T ss_dssp HHHHHHHH------HHHHHHTTCSHHHHHHHHHHHTTC-TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred cHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCchHH
Confidence 44556666 788888999999999998887664 4567888888888888999999999998888763 235667
Q ss_pred HHHHHHHHHHcCChhHHHHHHHhccc
Q psy767 197 YTKLMCGYAKHGDMDSIKTKIPSLKP 222 (902)
Q Consensus 197 y~~ll~a~~~~g~~~~a~~l~~~~~~ 222 (902)
+..+..++...|++++|.+.|+....
T Consensus 87 ~~~la~~~~~~~~~~~A~~~~~~~~~ 112 (133)
T 2lni_A 87 YTRKAAALEAMKDYTKAMDVYQKALD 112 (133)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 77888888888888888777776654
No 139
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.39 E-value=0.0091 Score=62.69 Aligned_cols=25 Identities=0% Similarity=-0.144 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 265 QTYTKLMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 265 ~ty~~LI~a~~~~g~~~~A~~lf~~ 289 (902)
.+|+.+...|.+.|++++|+..|++
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~k 221 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNK 221 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHH
Confidence 5888899999999999999999987
No 140
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.36 E-value=0.0052 Score=64.33 Aligned_cols=96 Identities=11% Similarity=-0.070 Sum_probs=71.2
Q ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHH
Q psy767 158 SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237 (902)
Q Consensus 158 ~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~ 237 (902)
+...+..+...+.+.|++++|+..|++..... .-+...|..+..+|.+.|++++|...++......
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~------------- 68 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRALELD------------- 68 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC-------------
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-------------
Confidence 45677778888888888888888888887763 2256677778888888888887777776665532
Q ss_pred HHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy767 238 LILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 238 ~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m 290 (902)
+.+...|..+..+|...|++++|...|++.
T Consensus 69 -----------------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 98 (281)
T 2c2l_A 69 -----------------------GQSVKAHFFLGQCQLEMESYDEAIANLQRA 98 (281)
T ss_dssp -----------------------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -----------------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 345667777778888888888888888763
No 141
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.36 E-value=0.0013 Score=63.32 Aligned_cols=123 Identities=8% Similarity=-0.016 Sum_probs=95.8
Q ss_pred HHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHH-HHhC
Q psy767 94 LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG-HSQA 172 (902)
Q Consensus 94 ~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~-~~~~ 172 (902)
...|++++|...|+...+.. +.+...|..+ ...|...|++++|...|+.....+ +.+...|..+..+ |...
T Consensus 21 ~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l------g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~l~~~~ 92 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRAN-PQNSEQWALL------GEYYLWQNDYSNSLLAYRQALQLR-GENAELYAALATVLYYQA 92 (177)
T ss_dssp C-----CCCCHHHHHHHHHC-CSCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHH-CSCHHHHHHHHHHHHHHT
T ss_pred hhccCHHHHHHHHHHHHHhC-CCcHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhc
Confidence 34688999999999887654 2366778888 889999999999999999987764 4567788888888 7789
Q ss_pred CCH--HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCC
Q psy767 173 NDM--ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225 (902)
Q Consensus 173 g~~--~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~ 225 (902)
|++ ++|...|+...+.. .-+...+..+...|...|++++|...++.......
T Consensus 93 ~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 146 (177)
T 2e2e_A 93 SQHMTAQTRAMIDKALALD-SNEITALMLLASDAFMQANYAQAIELWQKVMDLNS 146 (177)
T ss_dssp TTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC
T ss_pred CCcchHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCC
Confidence 998 99999999998874 22567888888899999999999888887766443
No 142
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.35 E-value=0.0018 Score=57.96 Aligned_cols=113 Identities=7% Similarity=-0.032 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCC--CCCC--
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT--FPIS-- 158 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~--~~p~-- 158 (902)
...|..+...+...|++++|...|++..... +.+...+..+ ...|...|++++|...|+...... ..++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l------a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 76 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELD-PTNMTYITNQ------AAVYFEKGDYNKCRELCEKAIEVGRENREDYR 76 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CccHHHHHHH------HHHHHHhccHHHHHHHHHHHHhhccccchhHH
Confidence 4578889999999999999999999988754 3366777777 889999999999999999886643 1222
Q ss_pred --HHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q psy767 159 --EGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204 (902)
Q Consensus 159 --~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~ 204 (902)
..+|..+...|.+.|++++|.+.|+...+. .|+...+..+....
T Consensus 77 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~l~~~~ 122 (131)
T 1elr_A 77 QIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE--HRTPDVLKKCQQAE 122 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--CCCHHHHHHHHHHH
Confidence 678889999999999999999999999886 46666555544443
No 143
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.34 E-value=0.016 Score=65.87 Aligned_cols=340 Identities=6% Similarity=-0.067 Sum_probs=182.7
Q ss_pred CCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCC-chHHHHHHHHHHHC-CCCC-CHHHHHHHHHhHHHHHH
Q psy767 57 PSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEH-TFSPTDFLAKLESQ-GIEP-NRVTYQQLISNSKLISK 133 (902)
Q Consensus 57 g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~-~~~A~~l~~~M~~~-g~~p-d~~t~~~ll~~~~li~~ 133 (902)
|+++.++.+|+.... ..|++..|...+....+.+. .+....+|+..... |..| +...|... +..
T Consensus 28 ~~~e~~~~iferal~-------~~ps~~LW~~Y~~f~~~~~~~~~~i~~~fe~al~~vg~d~~s~~iW~~Y------i~f 94 (493)
T 2uy1_A 28 KDYRSLESLFGRCLK-------KSYNLDLWMLYIEYVRKVSQKKFKLYEVYEFTLGQFENYWDSYGLYKEY------IEE 94 (493)
T ss_dssp TCHHHHHHHHHHHST-------TCCCHHHHHHHHHHHHHHC----CTHHHHHHHHHHSTTCTTCHHHHHHH------HHH
T ss_pred CCHHHHHHHHHHHhc-------cCCCHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHcCCCcccHHHHHHH------HHH
Confidence 678888888888887 44799999999998888763 45677888877653 5444 56667666 654
Q ss_pred HH----HcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHH-------------hCCCHHHHHHHHHHHHHCCCCCCHHH
Q psy767 134 YC----QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS-------------QANDMASAEGILTMMSQAGLEPSAQT 196 (902)
Q Consensus 134 ~~----~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~-------------~~g~~~~A~~l~~~M~~~g~~pd~~t 196 (902)
+. ..|+++.+.++|+........--...|......-. ..+.+..|..+|+++...--..+...
T Consensus 95 ~~~~~~~~~~~~~vR~iy~rAL~~P~~~~~~lw~~Y~~fE~~~~~~~~~~~~~~~~~~y~~ar~~y~~~~~~~~~~s~~~ 174 (493)
T 2uy1_A 95 EGKIEDEQTRIEKIRNGYMRALQTPMGSLSELWKDFENFELELNKITGKKIVGDTLPIFQSSFQRYQQIQPLIRGWSVKN 174 (493)
T ss_dssp TSSCSSHHHHHHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSHHH
T ss_pred HHhchhhhHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHhccccHHHHHHHHhHHHHHHHHHHHHHHHHHhhccHHH
Confidence 43 35678899999999877321111122322221110 01123334444444432100012334
Q ss_pred HHHHHHHHHHcC--C-----hhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHH
Q psy767 197 YTKLMCGYAKHG--D-----MDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTK 269 (902)
Q Consensus 197 y~~ll~a~~~~g--~-----~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~ 269 (902)
|...+.--...+ - .+.+..+++.+.... +.....+..++..+...|+.+.|..++++.... +.+...|.
T Consensus 175 W~~y~~~E~~~~~~~~~~~~~~Rv~~~ye~al~~~-p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~--P~~~~l~~- 250 (493)
T 2uy1_A 175 AARLIDLEMENGMKLGGRPHESRMHFIHNYILDSF-YYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM--SDGMFLSL- 250 (493)
T ss_dssp HHHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCSSHHHH-
T ss_pred HHHHHHHHhcCCccCcchhhHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC--CCcHHHHH-
Confidence 444333322211 1 223556677666532 223455666666677789999999999988887 44433333
Q ss_pred HHHHHHHcCCHHHHHHHHHHhcc-C-----CCCC-C-----HHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchH
Q psy767 270 LMCGYAKHGDMDSVRRLLAQSGS-S-----LVNG-D-----YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337 (902)
Q Consensus 270 LI~a~~~~g~~~~A~~lf~~m~~-~-----~~~p-~-----~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m 337 (902)
.|+...+.++..+-+.+... . +..+ . |..++...... +..+.+..++. ..
T Consensus 251 ---~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~---~~~~~AR~i~~------------~A 312 (493)
T 2uy1_A 251 ---YYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKK---RGLELFRKLFI------------EL 312 (493)
T ss_dssp ---HHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHH---HCHHHHHHHHH------------HH
T ss_pred ---HHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHc---CCHHHHHHHHH------------Hh
Confidence 23332222222111111100 0 0001 0 22222222222 23455555442 12
Q ss_pred HhcCCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHH-cCCCCCccc-HHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCH
Q psy767 338 SQAGLEPSAQTYTKLMCGYAKHG-DMDSIRRLLAQ-NGSSLVNGD-YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA 414 (902)
Q Consensus 338 ~~~g~~p~~~t~~~Li~~y~~~g-~~~~A~~~~~~-m~~~~~~~~-~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~ 414 (902)
... ..+..+|......-...+ +.+.|..+|+. +...|..+. |...+.-....|+.+.|..+|++... .
T Consensus 313 ~~~--~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~~k-------~ 383 (493)
T 2uy1_A 313 GNE--GVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALFKRLEK-------T 383 (493)
T ss_dssp TTS--CCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHSCC-------B
T ss_pred hCC--CCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------H
Confidence 111 123445543333333333 69999999987 333344444 56677777888999999999999842 2
Q ss_pred HHHHHHH----HHcCCHHHHHHHHHHHHhc
Q psy767 415 ANHIYHL----INKGQIDAAYRIVNTLARS 440 (902)
Q Consensus 415 ~t~i~~l----~~~g~~~~A~~~~~~m~~~ 440 (902)
..+...+ ...|+.+.+..++++....
T Consensus 384 ~~lw~~~~~fE~~~G~~~~~r~v~~~~~~~ 413 (493)
T 2uy1_A 384 SRMWDSMIEYEFMVGSMELFRELVDQKMDA 413 (493)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3332222 4679999999988887764
No 144
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.33 E-value=0.0028 Score=57.29 Aligned_cols=91 Identities=7% Similarity=0.016 Sum_probs=75.7
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~ 210 (902)
-..|.+.|++++|...|++..+.+ |.+...|..+..+|.+.|++++|+..|+...+.. ..+...|..+..+|...|++
T Consensus 20 G~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~~~~ 97 (126)
T 4gco_A 20 GNEYFKKGDYPTAMRHYNEAVKRD-PENAILYSNRAACLTKLMEFQRALDDCDTCIRLD-SKFIKGYIRKAACLVAMREW 97 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHCCCH
Confidence 778889999999999999887765 5677889999999999999999999999988764 23567888888889999999
Q ss_pred hHHHHHHHhcccC
Q psy767 211 DSIKTKIPSLKPQ 223 (902)
Q Consensus 211 ~~a~~l~~~~~~~ 223 (902)
++|.+.|+...+.
T Consensus 98 ~~A~~~~~~al~l 110 (126)
T 4gco_A 98 SKAQRAYEDALQV 110 (126)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9888888776653
No 145
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=97.32 E-value=0.0055 Score=64.78 Aligned_cols=203 Identities=8% Similarity=-0.006 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHCC--CchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHc---CCHHHHHHHHHHhhhCCCCCC
Q psy767 84 SHYNALLRVYLDNE--HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD---GNIEGATKILEFMRDKTFPIS 158 (902)
Q Consensus 84 ~~yn~li~~~~~~g--~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~---g~~~~A~~l~~~m~~~~~~p~ 158 (902)
..||.--..+...| ++++++.+++.+.....+ +..+|+.- ...|-...... +++++++.+++.+.+.+ +-|
T Consensus 68 taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R--~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~-pkn 143 (306)
T 3dra_A 68 TIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYR--QLIIGQIMELNNNDFDPYREFDILEAMLSSD-PKN 143 (306)
T ss_dssp HHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHH--HHHHHHHHHHTTTCCCTHHHHHHHHHHHHHC-TTC
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHH--HHHHHHHHHhccccCCHHHHHHHHHHHHHhC-CCC
Confidence 44666555566665 666666666666664322 22222221 11111111222 56666666666666554 445
Q ss_pred HHHHHHHHHHHHhCCCHH--HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCC------hhHHHHHHHhcccCCCccchh
Q psy767 159 EGVFNALIYGHSQANDMA--SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD------MDSIKTKIPSLKPQSELFLCF 230 (902)
Q Consensus 159 ~~~yn~Li~~~~~~g~~~--~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~------~~~a~~l~~~~~~~~~~~~~~ 230 (902)
-.+|+----.+.+.|.++ ++++.++.+.+.... |...|+.-...+...+. ++++.+.++......+ .+..
T Consensus 144 y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~-N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p-~n~S 221 (306)
T 3dra_A 144 HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLK-NNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCP-QNPS 221 (306)
T ss_dssp HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCS-SCHH
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCC-CCcc
Confidence 566666555556666655 666666666665432 55556554444444444 5555555555544322 2333
Q ss_pred hHHHHHHHHHhcCC-HHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhcc
Q psy767 231 SFQLTNLLILVSSD-MASAEGILTMMSQAG--LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292 (902)
Q Consensus 231 ~~~~~~~~~~~~g~-~~~A~~l~~~m~~~g--~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~ 292 (902)
.+.-...++...|+ .+.+..+...+...+ -..+...+..+...|.+.|+.++|.++|+.+..
T Consensus 222 aW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~~~~~~~A~~~~~~l~~ 286 (306)
T 3dra_A 222 TWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQQKKYNESRTVYDLLKS 286 (306)
T ss_dssp HHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHh
Confidence 44444444444444 233444444443322 144667777788888888888888888887754
No 146
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.31 E-value=0.00013 Score=72.00 Aligned_cols=174 Identities=12% Similarity=-0.000 Sum_probs=110.8
Q ss_pred ccCCCCCCCccchHHhhcHHHHHHHhccccchhHHHHHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCC----
Q psy767 7 NVSDTATPVGITTEVSEATAEVTTVLGALGAFLVLLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLD---- 82 (902)
Q Consensus 7 ~~~~~~~~~g~~~~~s~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd---- 82 (902)
+.|.++.-++......++++.+.................+..+...+...|++++|...|.......-.... .+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~-~~~~~~~ 80 (198)
T 2fbn_A 2 GSSHHHHHHSSGRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEE-WDDQILL 80 (198)
T ss_dssp --------------------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTT-CCCHHHH
T ss_pred CCcccccchhhhhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccc-cchhhHH
Confidence 445566666667777788888887777776666666777777888889999999999999988861111000 011
Q ss_pred -------HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCC
Q psy767 83 -------ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTF 155 (902)
Q Consensus 83 -------~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~ 155 (902)
...|..+...|...|++++|+..++...+.. +.+...+..+ ..+|...|++++|...|+...+..
T Consensus 81 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l------g~~~~~~~~~~~A~~~~~~al~~~- 152 (198)
T 2fbn_A 81 DKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID-KNNVKALYKL------GVANMYFGFLEEAKENLYKAASLN- 152 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-cccHHHHHHH------HHHHHHcccHHHHHHHHHHHHHHC-
Confidence 2788889999999999999999999988753 2366777777 889999999999999999987764
Q ss_pred CCCHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHCC
Q psy767 156 PISEGVFNALIYGHSQANDMASAE-GILTMMSQAG 189 (902)
Q Consensus 156 ~p~~~~yn~Li~~~~~~g~~~~A~-~l~~~M~~~g 189 (902)
+-+...+..+..++...++.+++. ..|..|...|
T Consensus 153 p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~ 187 (198)
T 2fbn_A 153 PNNLDIRNSYELCVNKLKEARKKDKLTFGGMFDKG 187 (198)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHC-------------
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 456778888888888887777776 5566555443
No 147
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.31 E-value=0.0016 Score=61.22 Aligned_cols=97 Identities=9% Similarity=-0.039 Sum_probs=81.6
Q ss_pred HHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHH
Q psy767 119 VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198 (902)
Q Consensus 119 ~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~ 198 (902)
..+..+ -..+.+.|++++|...|+.....+ |-+...|..+-.+|...|++++|+..|+....... -+...|.
T Consensus 37 ~~~~~l------g~~~~~~g~~~eA~~~~~~al~~~-P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P-~~~~~~~ 108 (151)
T 3gyz_A 37 DDIYSY------AYDFYNKGRIEEAEVFFRFLCIYD-FYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGK-NDYTPVF 108 (151)
T ss_dssp HHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS-SCCHHHH
T ss_pred HHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCC-CCcHHHH
Confidence 345556 778889999999999999998876 66788999999999999999999999999988742 2567888
Q ss_pred HHHHHHHHcCChhHHHHHHHhcccC
Q psy767 199 KLMCGYAKHGDMDSIKTKIPSLKPQ 223 (902)
Q Consensus 199 ~ll~a~~~~g~~~~a~~l~~~~~~~ 223 (902)
.+-.+|...|++++|...|+.....
T Consensus 109 ~lg~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 109 HTGQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 8999999999999998888877654
No 148
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.30 E-value=0.0037 Score=56.74 Aligned_cols=100 Identities=9% Similarity=-0.119 Sum_probs=71.2
Q ss_pred CCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHH
Q psy767 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG 160 (902)
Q Consensus 81 pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~ 160 (902)
.+...|..+...+...|++++|...|+...... +.+...|..+ ..++...|++++|...|+.....+ +.+..
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l------~~~~~~~~~~~~A~~~~~~al~~~-p~~~~ 78 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNR------ALCYLKMQQPEQALADCRRALELD-GQSVK 78 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC-cCcHHHHHHH------HHHHHHhcCHHHHHHHHHHHHHhC-chhHH
Confidence 456677777777778888888888887776543 2245666666 777777788888888777776654 44566
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHC
Q psy767 161 VFNALIYGHSQANDMASAEGILTMMSQA 188 (902)
Q Consensus 161 ~yn~Li~~~~~~g~~~~A~~l~~~M~~~ 188 (902)
.|..+..+|...|++++|+..|++....
T Consensus 79 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 106 (137)
T 3q49_B 79 AHFFLGQCQLEMESYDEAIANLQRAYSL 106 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 7777777777788888887777776553
No 149
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.29 E-value=0.0051 Score=56.40 Aligned_cols=100 Identities=5% Similarity=-0.146 Sum_probs=86.2
Q ss_pred CCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCC----HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCC
Q psy767 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPN----RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTF 155 (902)
Q Consensus 80 ~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd----~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~ 155 (902)
+.+...|..+...+...|++++|...|++..+. .|+ ...|..+ ...|...|++++|...++......
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~~~~~------a~~~~~~~~~~~A~~~~~~~~~~~- 95 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGL--DATPQDQAVLHRNR------AACHLKLEDYDKAETEASKAIEKD- 95 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS--CCCHHHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHT-
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH--cccchHHHHHHHHH------HHHHHHHccHHHHHHHHHHHHhhC-
Confidence 347788999999999999999999999999864 566 5667777 888999999999999999987764
Q ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC
Q psy767 156 PISEGVFNALIYGHSQANDMASAEGILTMMSQA 188 (902)
Q Consensus 156 ~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~ 188 (902)
+.+...|..+..+|...|++++|...|++..+.
T Consensus 96 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 96 GGDVKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 446788889999999999999999999999876
No 150
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.29 E-value=0.0016 Score=56.39 Aligned_cols=97 Identities=10% Similarity=-0.030 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCC--CHHH
Q psy767 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPI--SEGV 161 (902)
Q Consensus 84 ~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p--~~~~ 161 (902)
..|..+...+...|++++|...|++..+.. +.+...+..+ ...+...|++++|...|+...+.. +. +...
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~------a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~ 78 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQLD-PEESKYWLMK------GKALYNLERYEEAVDCYNYVINVI-EDEYNKDV 78 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHHC-CCCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHTS-CCTTCHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhC-cCCHHHHHHH------HHHHHHccCHHHHHHHHHHHHHhC-cccchHHH
Confidence 345555556666666666666666655432 1234455555 556666666666666666665543 23 4555
Q ss_pred HHHHHHHHHhC-CCHHHHHHHHHHHHHC
Q psy767 162 FNALIYGHSQA-NDMASAEGILTMMSQA 188 (902)
Q Consensus 162 yn~Li~~~~~~-g~~~~A~~l~~~M~~~ 188 (902)
|..+...|.+. |++++|.+.|+.....
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 79 WAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp HHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 66666666666 6666666666666554
No 151
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=97.24 E-value=0.068 Score=57.11 Aligned_cols=117 Identities=9% Similarity=0.040 Sum_probs=82.4
Q ss_pred HHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcC-CHHHHHHHHHHhhhCCCCCCHHHHHH
Q psy767 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG-NIEGATKILEFMRDKTFPISEGVFNA 164 (902)
Q Consensus 86 yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g-~~~~A~~l~~~m~~~~~~p~~~~yn~ 164 (902)
++.+-....+.+..++|+++++.+...... +...|+.- -..+...| ++++++.+++.+...+ +-+..+|+.
T Consensus 57 ~~~~r~~~~~~e~se~AL~lt~~~L~~nP~-~ytaWn~R------~~iL~~l~~~l~eEL~~~~~~L~~n-PKny~aW~h 128 (349)
T 3q7a_A 57 MDYFRAIAAKEEKSERALELTEIIVRMNPA-HYTVWQYR------FSLLTSLNKSLEDELRLMNEFAVQN-LKSYQVWHH 128 (349)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHH------HHHHHHTTCCHHHHHHHHHHHHHTT-CCCHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHhCch-hHHHHHHH------HHHHHHhhhhHHHHHHHHHHHHHhC-CCcHHHHHH
Confidence 333333344455667899999999976422 44556665 55566677 5999999999998876 567788888
Q ss_pred HHHHHHhC-C-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChh
Q psy767 165 LIYGHSQA-N-DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211 (902)
Q Consensus 165 Li~~~~~~-g-~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~ 211 (902)
--..+.+. + ++++++++++.+.+... -|..+|+.-.-.+.+.|.++
T Consensus 129 R~wlL~~l~~~~~~~EL~~~~k~L~~dp-kNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 129 RLLLLDRISPQDPVSEIEYIHGSLLPDP-KNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHHHHHCCSCCHHHHHHHHHHTSSCT-TCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCChHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhcccc
Confidence 77777776 6 88999999999988753 37778876555555444444
No 152
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.23 E-value=0.002 Score=55.71 Aligned_cols=92 Identities=9% Similarity=-0.044 Sum_probs=76.2
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHc-
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP--SAQTYTKLMCGYAKH- 207 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~p--d~~ty~~ll~a~~~~- 207 (902)
...+.+.|++++|...|+...+.. +.+...|..+...+...|++++|+..|++..+.. .. +...+..+...+...
T Consensus 13 ~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~l~~~~~~~~ 90 (112)
T 2kck_A 13 GVLQYDAGNYTESIDLFEKAIQLD-PEESKYWLMKGKALYNLERYEEAVDCYNYVINVI-EDEYNKDVWAAKADALRYIE 90 (112)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS-CCTTCHHHHHHHHHHHTTCS
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-cccchHHHHHHHHHHHHHHh
Confidence 777888999999999999887764 4567888889999999999999999999998863 22 467888888889999
Q ss_pred CChhHHHHHHHhcccCC
Q psy767 208 GDMDSIKTKIPSLKPQS 224 (902)
Q Consensus 208 g~~~~a~~l~~~~~~~~ 224 (902)
|++++|.+.+.......
T Consensus 91 ~~~~~A~~~~~~~~~~~ 107 (112)
T 2kck_A 91 GKEVEAEIAEARAKLEH 107 (112)
T ss_dssp SCSHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHhhcc
Confidence 99999888888877644
No 153
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.23 E-value=0.0031 Score=58.18 Aligned_cols=97 Identities=12% Similarity=-0.112 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHH
Q psy767 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163 (902)
Q Consensus 84 ~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn 163 (902)
..+..+...+.+.|++++|...|++...... .+...|..+ ..+|.+.|++++|...|+.....+ +-+...|.
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~l------g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~ 90 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCMLDH-YDARYFLGL------GACRQSLGLYEQALQSYSYGALMD-INEPRFPF 90 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCTHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHhCC-ccHHHHHHH------HHHHHHHhhHHHHHHHHHHHHhcC-CCCcHHHH
Confidence 4455556666677777777777777665432 245556556 666777777777777777766554 44556666
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHC
Q psy767 164 ALIYGHSQANDMASAEGILTMMSQA 188 (902)
Q Consensus 164 ~Li~~~~~~g~~~~A~~l~~~M~~~ 188 (902)
.+..+|...|++++|...|+...+.
T Consensus 91 ~lg~~~~~~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 91 HAAECHLQLGDLDGAESGFYSARAL 115 (142)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 6777777777777777777766554
No 154
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.21 E-value=0.00093 Score=62.50 Aligned_cols=90 Identities=9% Similarity=-0.019 Sum_probs=75.2
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~ 210 (902)
...+.+.|++++|...|+.....+ +.+...|..+-.+|...|++++|+..|+...... .-+...|..+..+|...|++
T Consensus 28 g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~~~lg~~~~~~g~~ 105 (148)
T 2vgx_A 28 AFNQYQSGXYEDAHXVFQALCVLD-HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD-IXEPRFPFHAAECLLQXGEL 105 (148)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcCChHHHHHHHHHHHHcC-cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCchHHHHHHHHHHHcCCH
Confidence 778888999999999999887765 5677888889999999999999999999988764 22567788888899999999
Q ss_pred hHHHHHHHhccc
Q psy767 211 DSIKTKIPSLKP 222 (902)
Q Consensus 211 ~~a~~l~~~~~~ 222 (902)
++|...|+....
T Consensus 106 ~~A~~~~~~al~ 117 (148)
T 2vgx_A 106 AEAESGLFLAQE 117 (148)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 988888877655
No 155
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.21 E-value=0.0071 Score=62.60 Aligned_cols=63 Identities=11% Similarity=-0.011 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHcCCCCCcc-----cHHHHHHHHHHcCChHHHHHHHHHcccCCCCCCC
Q psy767 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG-----DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSAD 413 (902)
Q Consensus 348 t~~~Li~~y~~~g~~~~A~~~~~~m~~~~~~~-----~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd 413 (902)
.+..+-.++...|++++|+..|++-...+..| .+.....++.+.|+.++|..+|+++.. ..|+
T Consensus 173 a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a---~~P~ 240 (282)
T 4f3v_A 173 AGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQT---THPE 240 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH---HSCC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---cCCc
Confidence 44455566666666666666666543222211 134556666777777777777777766 4554
No 156
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.21 E-value=0.0086 Score=62.00 Aligned_cols=196 Identities=10% Similarity=-0.031 Sum_probs=129.8
Q ss_pred HHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHh-HHHHHHHHHcCCHHHHHHHHHHhhhCCCCCC------------
Q psy767 92 VYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-SKLISKYCQDGNIEGATKILEFMRDKTFPIS------------ 158 (902)
Q Consensus 92 ~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~-~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~------------ 158 (902)
++ ..+++..|.+.|.+..+.... ....|.-++.+ -.=...+.+.++..++...+.. ..++.|+
T Consensus 16 ~~-~~~d~~~A~~~F~~a~~~dP~-~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~--~l~l~p~~l~a~~~~~g~y 91 (282)
T 4f3v_A 16 SM-LPMSEARSLDLFTEITNYDES-ACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSG--SVQISMSTLNARIAIGGLY 91 (282)
T ss_dssp HH-TTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHH--TTTCCGGGGCCEEECCTTT
T ss_pred cc-cCCCHHHHHHHHHHHHHhChh-hhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHH--HhcCChhhhhhhhccCCcc
Confidence 44 689999999999999876422 45556544100 0000111111222222222222 2222222
Q ss_pred ----------HHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCcc-
Q psy767 159 ----------EGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF- 227 (902)
Q Consensus 159 ----------~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~- 227 (902)
...+-.+...+...|++++|.++|..+...+ |+......+...+.+.+++++|+..|+.........
T Consensus 92 ~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~--p~~~~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~ 169 (282)
T 4f3v_A 92 GDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPVAG--SEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFL 169 (282)
T ss_dssp CCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTT--CHHHHHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHH
T ss_pred cccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHcCCHHHHHHHHHHhhccCCccc
Confidence 1233456677888999999999999888753 655566666678999999999999998665543221
Q ss_pred chhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHhccC
Q psy767 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS--AQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293 (902)
Q Consensus 228 ~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd--~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~ 293 (902)
....+..+..++...|++++|+..|++.......|. ...+...-.++.+.|+.++|..+|+++...
T Consensus 170 ~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 170 AGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 123566677778889999999999999985543354 346777888999999999999999997654
No 157
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.19 E-value=0.0053 Score=53.50 Aligned_cols=92 Identities=11% Similarity=0.006 Sum_probs=74.8
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~ 210 (902)
...+...|++++|...|+...... +.+...|..+...+...|++++|...+++..+.. ..+...+..+..++...|++
T Consensus 11 ~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~ 88 (118)
T 1elw_A 11 GNKALSVGNIDDALQCYSEAIKLD-PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK-PDWGKGYSRKAAALEFLNRF 88 (118)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHHhhH
Confidence 778888999999999999887754 4567888888899999999999999999888764 22567788888888888988
Q ss_pred hHHHHHHHhcccCC
Q psy767 211 DSIKTKIPSLKPQS 224 (902)
Q Consensus 211 ~~a~~l~~~~~~~~ 224 (902)
++|...++......
T Consensus 89 ~~A~~~~~~~~~~~ 102 (118)
T 1elw_A 89 EEAKRTYEEGLKHE 102 (118)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcC
Confidence 88888887776543
No 158
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.17 E-value=0.0038 Score=67.34 Aligned_cols=129 Identities=9% Similarity=0.005 Sum_probs=97.9
Q ss_pred HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCC---------------HHHHHHHHHHHHhCCCHHHHHHHH
Q psy767 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS---------------EGVFNALIYGHSQANDMASAEGIL 182 (902)
Q Consensus 118 ~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~---------------~~~yn~Li~~~~~~g~~~~A~~l~ 182 (902)
...|..+ -..|.+.|++++|...|+...... +.+ ...|..+..+|.+.|++++|+..|
T Consensus 147 a~~~~~~------g~~~~~~g~~~~A~~~y~~Al~~~-p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 219 (336)
T 1p5q_A 147 STIVKER------GTVYFKEGKYKQALLQYKKIVSWL-EYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESC 219 (336)
T ss_dssp HHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHT-TTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHH------HHHHHHCCCHHHHHHHHHHHHHHh-hccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4456666 888999999999999999987754 222 478999999999999999999999
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCC
Q psy767 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262 (902)
Q Consensus 183 ~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~p 262 (902)
+...+.. ..+...|..+..+|...|++++|...|+...... +.
T Consensus 220 ~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~------------------------------------P~ 262 (336)
T 1p5q_A 220 NKALELD-SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLY------------------------------------PN 262 (336)
T ss_dssp HHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------------------------------------SS
T ss_pred HHHHHhC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC------------------------------------CC
Confidence 9998864 2366788888888888888887777776654422 34
Q ss_pred CHHHHHHHHHHHHHcCCHHHH-HHHHHHh
Q psy767 263 SAQTYTKLMCGYAKHGDMDSV-RRLLAQS 290 (902)
Q Consensus 263 d~~ty~~LI~a~~~~g~~~~A-~~lf~~m 290 (902)
+...+..+...+.+.|+.++| ..+|..|
T Consensus 263 ~~~a~~~l~~~~~~~~~~~~a~~~~~~~~ 291 (336)
T 1p5q_A 263 NKAAKTQLAVCQQRIRRQLAREKKLYANM 291 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677777777777777777 3455554
No 159
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.14 E-value=0.0042 Score=58.81 Aligned_cols=99 Identities=13% Similarity=0.082 Sum_probs=74.8
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV 161 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~ 161 (902)
+...|..+...|.+.|++++|+..|++..+... -+...|..+ ..+|.+.|++++|...|+...+.+ +-+...
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~l------~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~ 81 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQALSIAP-ANPIYLSNR------AAAYSASGQHEKAAEDAELATVVD-PKYSKA 81 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-cCHHHHHHH------HHHHHHccCHHHHHHHHHHHHHhC-CCCHHH
Confidence 456677777888888888888888888776532 256667777 777888888888888888877664 445677
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHC
Q psy767 162 FNALIYGHSQANDMASAEGILTMMSQA 188 (902)
Q Consensus 162 yn~Li~~~~~~g~~~~A~~l~~~M~~~ 188 (902)
|..+..+|.+.|++++|+..|++..+.
T Consensus 82 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 82 WSRLGLARFDMADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 888888888888888888888877665
No 160
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.09 E-value=0.007 Score=54.82 Aligned_cols=99 Identities=7% Similarity=-0.054 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHH
Q psy767 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195 (902)
Q Consensus 116 pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ 195 (902)
.+...|..+ ...+...|++++|...|+.....+ +.+...|..+..+|...|++++|+..|+...+.. ..+..
T Consensus 7 ~~~~~~~~~------g~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~ 78 (137)
T 3q49_B 7 PSAQELKEQ------GNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRALELD-GQSVK 78 (137)
T ss_dssp CCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHH
T ss_pred ccHHHHHHH------HHHHHHhCcHHHHHHHHHHHHhhC-cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-chhHH
Confidence 356667777 888889999999999999887765 5567888899999999999999999999988764 22567
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHhccc
Q psy767 196 TYTKLMCGYAKHGDMDSIKTKIPSLKP 222 (902)
Q Consensus 196 ty~~ll~a~~~~g~~~~a~~l~~~~~~ 222 (902)
.|..+..+|...|++++|...|.....
T Consensus 79 ~~~~l~~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 79 AHFFLGQCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 888888888899999988887776644
No 161
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.0056 Score=54.79 Aligned_cols=90 Identities=9% Similarity=0.046 Sum_probs=74.2
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~ 210 (902)
...+.+.|++++|...|+...+.+ +.+...|..+..+|.+.|++++|+..|+...+.. .-+...|..+..++...|++
T Consensus 11 g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~ 88 (126)
T 3upv_A 11 GKEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKD-PNFVRAYIRKATAQIAVKEY 88 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHHhCH
Confidence 777888999999999999887765 5577889999999999999999999999988764 22566888888888899999
Q ss_pred hHHHHHHHhccc
Q psy767 211 DSIKTKIPSLKP 222 (902)
Q Consensus 211 ~~a~~l~~~~~~ 222 (902)
++|...|+....
T Consensus 89 ~~A~~~~~~al~ 100 (126)
T 3upv_A 89 ASALETLDAART 100 (126)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888887776654
No 162
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.05 E-value=0.0048 Score=56.88 Aligned_cols=90 Identities=13% Similarity=-0.007 Sum_probs=75.1
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~ 210 (902)
...+.+.|++++|...|+.....+ +.+...|..+-.+|.+.|++++|+..|+...... .-+...|..+..+|...|++
T Consensus 25 a~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~ 102 (142)
T 2xcb_A 25 GFNQYQAGKWDDAQKIFQALCMLD-HYDARYFLGLGACRQSLGLYEQALQSYSYGALMD-INEPRFPFHAAECHLQLGDL 102 (142)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHccHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCcHHHHHHHHHHHHcCCH
Confidence 677788999999999999987765 5677888889999999999999999999998864 23556778888889999999
Q ss_pred hHHHHHHHhccc
Q psy767 211 DSIKTKIPSLKP 222 (902)
Q Consensus 211 ~~a~~l~~~~~~ 222 (902)
++|...|+....
T Consensus 103 ~~A~~~~~~al~ 114 (142)
T 2xcb_A 103 DGAESGFYSARA 114 (142)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888887654
No 163
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=97.01 E-value=0.0072 Score=54.54 Aligned_cols=107 Identities=8% Similarity=-0.031 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCC--CCCC--
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT--FPIS-- 158 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~--~~p~-- 158 (902)
...|..+-..+.+.|++++|+..|++..+... -+...|..+ -.+|.+.|++++|++.|+...+.+ ..++
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p-~~~~~~~nl------g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 80 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDP-SNITFYNNK------AAVYFEEKKFAECVQFCEKAVEVGRETRADYK 80 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHhH------HHHHHHhhhHHHHHHHHHHHHHhCcccchhhH
Confidence 45688889999999999999999999887532 257778888 999999999999999999876432 1111
Q ss_pred --HHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHH
Q psy767 159 --EGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198 (902)
Q Consensus 159 --~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~ 198 (902)
..+|..+-.++...|++++|++.|++.... .||..+..
T Consensus 81 ~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~--~~~~~~~~ 120 (127)
T 4gcn_A 81 LIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE--FRDPELVK 120 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SCCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CcCHHHHH
Confidence 246777888899999999999999998775 56765543
No 164
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=96.99 E-value=0.007 Score=57.20 Aligned_cols=99 Identities=7% Similarity=-0.038 Sum_probs=80.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHH
Q psy767 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196 (902)
Q Consensus 117 d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t 196 (902)
+...|..+ ...+.+.|++++|...|+...+.. +-+...|..+..+|.+.|++++|+..|+...+.. .-+...
T Consensus 10 ~a~~~~~~------g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~ 81 (164)
T 3sz7_A 10 ESDKLKSE------GNAAMARKEYSKAIDLYTQALSIA-PANPIYLSNRAAAYSASGQHEKAAEDAELATVVD-PKYSKA 81 (164)
T ss_dssp HHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred hHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHH
Confidence 34456666 788889999999999999987765 4577889999999999999999999999998874 225778
Q ss_pred HHHHHHHHHHcCChhHHHHHHHhcccC
Q psy767 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQ 223 (902)
Q Consensus 197 y~~ll~a~~~~g~~~~a~~l~~~~~~~ 223 (902)
|..+..+|...|++++|...|+.....
T Consensus 82 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 82 WSRLGLARFDMADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 888889999999999888888877653
No 165
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.98 E-value=0.0043 Score=55.55 Aligned_cols=95 Identities=13% Similarity=-0.010 Sum_probs=69.6
Q ss_pred HHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHH
Q psy767 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165 (902)
Q Consensus 86 yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~L 165 (902)
+..+...+.+.|++++|...|++..+... -+...|..+ -.++...|++++|...|+...+.+ +-+...|..+
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P-~~~~a~~~l------g~~~~~~g~~~~A~~~~~~al~l~-P~~~~~~~~l 91 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEP-EREEAWRSL------GLTQAENEKDGLAIIALNHARMLD-PKDIAVHAAL 91 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCC-CCHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHH
Confidence 44566677788888888888888776432 256666666 777778888888888888877654 4466777788
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHC
Q psy767 166 IYGHSQANDMASAEGILTMMSQA 188 (902)
Q Consensus 166 i~~~~~~g~~~~A~~l~~~M~~~ 188 (902)
..+|.+.|++++|+..|++..+.
T Consensus 92 a~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 92 AVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh
Confidence 88888888888888888877654
No 166
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.94 E-value=0.018 Score=64.02 Aligned_cols=200 Identities=10% Similarity=-0.080 Sum_probs=104.8
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCC----------------HHHHHHHHHHHHhCCCHHHHHHHHHHHHHC-CCCCC
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPIS----------------EGVFNALIYGHSQANDMASAEGILTMMSQA-GLEPS 193 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~----------------~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~-g~~pd 193 (902)
...+.+.|++++|.+.|....+..-... ..++..|...|...|++++|.+++..+... +-.++
T Consensus 11 a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~ 90 (434)
T 4b4t_Q 11 ARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAK 90 (434)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccc
Confidence 3455667778888777777765432111 012555666666666666666666555432 00111
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHH----CCCCCC-HHHHH
Q psy767 194 AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ----AGLEPS-AQTYT 268 (902)
Q Consensus 194 ~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~----~g~~pd-~~ty~ 268 (902)
..+-..+ ...+..++...|+.+.|..++..... .+..+. ..++.
T Consensus 91 ~~~~~~~-------------------------------~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (434)
T 4b4t_Q 91 SKTVKVL-------------------------------KTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSI 139 (434)
T ss_dssp HHHHHHH-------------------------------HHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHH
T ss_pred hHHHHHH-------------------------------HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHH
Confidence 1111000 01111111223455555555554432 233333 45778
Q ss_pred HHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCC-CHH
Q psy767 269 KLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP-SAQ 347 (902)
Q Consensus 269 ~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p-~~~ 347 (902)
.+...|...|++++|..++.+.... ....+-.+ ...
T Consensus 140 ~la~~~~~~g~~~~A~~~l~~~~~~-------------------------------------------~~~~~~~~~~~~ 176 (434)
T 4b4t_Q 140 KLATLHYQKKQYKDSLALINDLLRE-------------------------------------------FKKLDDKPSLVD 176 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-------------------------------------------HTTSSCSTHHHH
T ss_pred HHHHHHHHccChHHHHHHHHHHHHH-------------------------------------------HHhcccchhHHH
Confidence 8888999999999999998873211 11111122 235
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHc----CCCCCccc-----HHHHHHHHHHcCChHHHHHHHHHc
Q psy767 348 TYTKLMCGYAKHGDMDSIRRLLAQN----GSSLVNGD-----YLDIIHALAVSGHGEYIDEIISKI 404 (902)
Q Consensus 348 t~~~Li~~y~~~g~~~~A~~~~~~m----~~~~~~~~-----~~~li~~~~~~g~~~~A~~l~~~m 404 (902)
+|..++..|...|++++|..++++. ...+..+. +..+...+...|+++.|...|.+.
T Consensus 177 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a 242 (434)
T 4b4t_Q 177 VHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFES 242 (434)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 6777788888888888888877652 11111111 333444445555666665555444
No 167
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=96.88 E-value=0.0049 Score=54.89 Aligned_cols=91 Identities=10% Similarity=0.065 Sum_probs=66.6
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCC--CCC----HHHHHHHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL--EPS----AQTYTKLMCGY 204 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~--~pd----~~ty~~ll~a~ 204 (902)
...+...|+++.|...|+...... +.+...|..+...|...|++++|...|++...... .++ ..+|..+..++
T Consensus 11 ~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 89 (131)
T 1elr_A 11 GNDAYKKKDFDTALKHYDKAKELD-PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSY 89 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcC-CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHH
Confidence 777888888888888888877654 45677788888888888888888888888766521 122 55666677777
Q ss_pred HHcCChhHHHHHHHhccc
Q psy767 205 AKHGDMDSIKTKIPSLKP 222 (902)
Q Consensus 205 ~~~g~~~~a~~l~~~~~~ 222 (902)
...|++++|...|+....
T Consensus 90 ~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 90 FKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHH
Confidence 777777777666665544
No 168
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.83 E-value=0.033 Score=61.75 Aligned_cols=170 Identities=8% Similarity=-0.082 Sum_probs=109.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHhhhCC-CCCCH----HHHHHHHHHHHhCCCHHHHHHHHHHHHH----CCCCCC-HHHH
Q psy767 128 SKLISKYCQDGNIEGATKILEFMRDKT-FPISE----GVFNALIYGHSQANDMASAEGILTMMSQ----AGLEPS-AQTY 197 (902)
Q Consensus 128 ~~li~~~~~~g~~~~A~~l~~~m~~~~-~~p~~----~~yn~Li~~~~~~g~~~~A~~l~~~M~~----~g~~pd-~~ty 197 (902)
..|...|...|++++|.+.+......- -.++. .+.+.+-..+...|+.+.|..++.+... .+..+. ..++
T Consensus 59 ~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 138 (434)
T 4b4t_Q 59 LELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLS 138 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHH
Confidence 457788999999999999998875421 11122 1233333444456889999999987753 333333 3466
Q ss_pred HHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHH
Q psy767 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP-SAQTYTKLMCGYAK 276 (902)
Q Consensus 198 ~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~p-d~~ty~~LI~a~~~ 276 (902)
..+...|...|++++|..++..... .....+-.+ ...+|..++..|..
T Consensus 139 ~~la~~~~~~g~~~~A~~~l~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 187 (434)
T 4b4t_Q 139 IKLATLHYQKKQYKDSLALINDLLR-------------------------------EFKKLDDKPSLVDVHLLESKVYHK 187 (434)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH-------------------------------HHTTSSCSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccChHHHHHHHHHHHH-------------------------------HHHhcccchhHHHHHHHHHHHHHH
Confidence 6777788888888877776665432 111111112 24578888899999
Q ss_pred cCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCC--HHHHHHHHH
Q psy767 277 HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS--AQTYTKLMC 354 (902)
Q Consensus 277 ~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~--~~t~~~Li~ 354 (902)
.|++++|..++++.... ....+..+. ...+..+..
T Consensus 188 ~~~~~~A~~~~~~al~~-------------------------------------------~~~~~~~~~~~~~~~~~~g~ 224 (434)
T 4b4t_Q 188 LRNLAKSKASLTAARTA-------------------------------------------ANSIYCPTQTVAELDLMSGI 224 (434)
T ss_dssp TTCHHHHHHHHHHHHHH-------------------------------------------HHHSCCCHHHHHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHHH-------------------------------------------hhcCCCchHHHHHHHHHHHH
Confidence 99999999999873210 111121221 355677778
Q ss_pred HHHHcCCHHHHHHHHHH
Q psy767 355 GYAKHGDMDSIRRLLAQ 371 (902)
Q Consensus 355 ~y~~~g~~~~A~~~~~~ 371 (902)
.|...|++++|...|.+
T Consensus 225 ~~~~~~~y~~A~~~~~~ 241 (434)
T 4b4t_Q 225 LHCEDKDYKTAFSYFFE 241 (434)
T ss_dssp HTTSSSCHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHH
Confidence 88889999999887765
No 169
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=96.82 E-value=0.02 Score=51.06 Aligned_cols=93 Identities=12% Similarity=0.026 Sum_probs=67.5
Q ss_pred HHHHHHHHCCCchHHHHHHHHHHHCCCCCCH---HHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCC---HHH
Q psy767 88 ALLRVYLDNEHTFSPTDFLAKLESQGIEPNR---VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS---EGV 161 (902)
Q Consensus 88 ~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~---~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~---~~~ 161 (902)
.+...+...|++++|...|+...+.... +. ..+..+ ..++.+.|++++|...|+...... +.+ ...
T Consensus 7 ~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~l------g~~~~~~~~~~~A~~~~~~~~~~~-p~~~~~~~~ 78 (129)
T 2xev_A 7 NVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWL------GESYYATRNFQLAEAQFRDLVSRY-PTHDKAAGG 78 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTSTTHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHH------HHHHHHhccHHHHHHHHHHHHHHC-CCCcccHHH
Confidence 4556677788888888888888764321 22 345555 777788888888888888877653 223 566
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHC
Q psy767 162 FNALIYGHSQANDMASAEGILTMMSQA 188 (902)
Q Consensus 162 yn~Li~~~~~~g~~~~A~~l~~~M~~~ 188 (902)
+..+..++.+.|++++|...|+.....
T Consensus 79 ~~~la~~~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 79 LLKLGLSQYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 777778888888888888888888776
No 170
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.80 E-value=0.0073 Score=54.01 Aligned_cols=91 Identities=11% Similarity=0.023 Sum_probs=76.0
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~ 210 (902)
...+.+.|++++|...|+...+.. +-+...|..+-.++...|++++|+..|++..+... -+...+..+..++...|++
T Consensus 24 g~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P-~~~~~~~~la~~~~~~g~~ 101 (121)
T 1hxi_A 24 GLSMLKLANLAEAALAFEAVCQKE-PEREEAWRSLGLTQAENEKDGLAIIALNHARMLDP-KDIAVHAALAVSHTNEHNA 101 (121)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCH
Confidence 667788999999999999988765 55788899999999999999999999999988642 2566888888899999999
Q ss_pred hHHHHHHHhcccC
Q psy767 211 DSIKTKIPSLKPQ 223 (902)
Q Consensus 211 ~~a~~l~~~~~~~ 223 (902)
++|...++.....
T Consensus 102 ~~A~~~~~~al~~ 114 (121)
T 1hxi_A 102 NAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHh
Confidence 9988888877653
No 171
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.77 E-value=0.023 Score=51.88 Aligned_cols=61 Identities=15% Similarity=-0.017 Sum_probs=34.1
Q ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHHcCChhHHHHHHHhc
Q psy767 158 SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS----AQTYTKLMCGYAKHGDMDSIKTKIPSL 220 (902)
Q Consensus 158 ~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd----~~ty~~ll~a~~~~g~~~~a~~l~~~~ 220 (902)
+...|..+...+...|++++|+..|++..+. .|+ ...|..+...|...|++++|...++..
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 91 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGL--DATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH--cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 3455555666666666666666666666554 344 344555555555555555555555444
No 172
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=96.76 E-value=0.0057 Score=69.26 Aligned_cols=152 Identities=11% Similarity=-0.011 Sum_probs=103.8
Q ss_pred CCCCCHHHHHHHHH-hHHH---HHHHHHcCCHHHHHHHHHHhhhC-------CCCCCHHHHHHHHHHHHhCCCHHHHHHH
Q psy767 113 GIEPNRVTYQQLIS-NSKL---ISKYCQDGNIEGATKILEFMRDK-------TFPISEGVFNALIYGHSQANDMASAEGI 181 (902)
Q Consensus 113 g~~pd~~t~~~ll~-~~~l---i~~~~~~g~~~~A~~l~~~m~~~-------~~~p~~~~yn~Li~~~~~~g~~~~A~~l 181 (902)
+..|+..++..++. +..+ +..+-..|++++|+.++++..+. +.+-...+++.|...|...|++++|+.+
T Consensus 294 ~~~~s~e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~ 373 (490)
T 3n71_A 294 DPKPSQEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHY 373 (490)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 34456665554422 1111 23455789999999998876431 1122346799999999999999999999
Q ss_pred HHHHHHC-----CC-CCCH-HHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHH
Q psy767 182 LTMMSQA-----GL-EPSA-QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254 (902)
Q Consensus 182 ~~~M~~~-----g~-~pd~-~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~ 254 (902)
+++..+. |- .|+. .+++.|...|...|++++|..+++ +|+.++..
T Consensus 374 ~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~----------------------------~Al~i~~~ 425 (490)
T 3n71_A 374 ARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMIC----------------------------KAYAILLV 425 (490)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHH----------------------------HHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH----------------------------HHHHHHHH
Confidence 9887542 31 3443 478889999999999999988877 45555555
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhcc
Q psy767 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292 (902)
Q Consensus 255 m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~ 292 (902)
..-...+....+.+.+-.++...+.+.+|..+|..+..
T Consensus 426 ~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 426 THGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444333344566666788888889999999988654
No 173
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.75 E-value=0.0053 Score=56.90 Aligned_cols=132 Identities=11% Similarity=-0.084 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCC-CCCH----HHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhC----
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGI-EPNR----VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK---- 153 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~-~pd~----~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~---- 153 (902)
..+|..+...|...|++++|...+++..+... .++. .++..+ ...+...|++++|...++.....
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l------~~~~~~~g~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNL------GNAYIFLGEFETASEYYKKTLLLARQL 82 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 35678888889999999999999988765311 1121 345555 88888999999999999886532
Q ss_pred CCCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHHcCChhHHHHHHHhc
Q psy767 154 TFPI-SEGVFNALIYGHSQANDMASAEGILTMMSQA----GLEP-SAQTYTKLMCGYAKHGDMDSIKTKIPSL 220 (902)
Q Consensus 154 ~~~p-~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~----g~~p-d~~ty~~ll~a~~~~g~~~~a~~l~~~~ 220 (902)
+-++ ....+..+...+...|++++|...+++.... +..+ ...++..+...+...|++++|.+.+++.
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 155 (164)
T 3ro3_A 83 KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKH 155 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 2111 1456778888889999999999999877543 1111 1235556666777777777777666543
No 174
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.70 E-value=0.0078 Score=54.31 Aligned_cols=90 Identities=10% Similarity=0.038 Sum_probs=63.2
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCC--CCC----HHHHHHHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL--EPS----AQTYTKLMCGY 204 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~--~pd----~~ty~~ll~a~ 204 (902)
-..+.+.|++++|+..|+...+.+ |-+...|+.+-.+|.+.|++++|++.|+...+... .++ ..+|..+-.++
T Consensus 15 G~~~~~~~~~~~A~~~y~~Al~~~-p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~ 93 (127)
T 4gcn_A 15 GNAAYKQKDFEKAHVHYDKAIELD-PSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAF 93 (127)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHH
Confidence 777888888888888888877764 55677888888888888888888888887765421 111 12455555666
Q ss_pred HHcCChhHHHHHHHhcc
Q psy767 205 AKHGDMDSIKTKIPSLK 221 (902)
Q Consensus 205 ~~~g~~~~a~~l~~~~~ 221 (902)
...|++++|.+.|+...
T Consensus 94 ~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 94 QKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHH
Confidence 66677776666665543
No 175
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.68 E-value=0.0093 Score=55.21 Aligned_cols=130 Identities=12% Similarity=-0.044 Sum_probs=85.0
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCC---CC--CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCC-CCC----HHHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTF---PI--SEGVFNALIYGHSQANDMASAEGILTMMSQAGL-EPS----AQTYTKL 200 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~---~p--~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~-~pd----~~ty~~l 200 (902)
...|...|++++|...++......- .+ -..++..+...|...|++++|...|++.....- .++ ...+..+
T Consensus 16 ~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l 95 (164)
T 3ro3_A 16 GNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSL 95 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 7788889999999999988654210 01 124678888889999999999999988754310 111 3456667
Q ss_pred HHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHcCC
Q psy767 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE-PSAQTYTKLMCGYAKHGD 279 (902)
Q Consensus 201 l~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~-pd~~ty~~LI~a~~~~g~ 279 (902)
...+...|++++|...++.... +.. ..+.. ....++..+...|...|+
T Consensus 96 ~~~~~~~~~~~~A~~~~~~a~~----------------------------~~~---~~~~~~~~~~~~~~la~~~~~~g~ 144 (164)
T 3ro3_A 96 GNTYTLLQDYEKAIDYHLKHLA----------------------------IAQ---ELKDRIGEGRACWSLGNAYTALGN 144 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH----------------------------HHH---HTTCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhhHHHHHHHHHHHHH----------------------------HHH---HccchHhHHHHHHHHHHHHHHccC
Confidence 7777788888887777665432 111 11111 113456667777778888
Q ss_pred HHHHHHHHHHhc
Q psy767 280 MDSVRRLLAQSG 291 (902)
Q Consensus 280 ~~~A~~lf~~m~ 291 (902)
+++|.+.+++..
T Consensus 145 ~~~A~~~~~~a~ 156 (164)
T 3ro3_A 145 HDQAMHFAEKHL 156 (164)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888777643
No 176
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.59 E-value=0.0037 Score=55.37 Aligned_cols=87 Identities=11% Similarity=0.016 Sum_probs=66.1
Q ss_pred HCCCchHHHHHHHHHHHCCC-CC-CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhC
Q psy767 95 DNEHTFSPTDFLAKLESQGI-EP-NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172 (902)
Q Consensus 95 ~~g~~~~A~~l~~~M~~~g~-~p-d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~ 172 (902)
..|++++|+..|++..+.+. .| +...+..+ ...|.+.|++++|...|+...+.+ +-+...|..+..++.+.
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~l------g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~ 74 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGL------GSTFRTLGEYRKAEAVLANGVKQF-PNHQALRVFYAMVLYNL 74 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHHHc
Confidence 35788899999999886541 12 34556666 888889999999999999987765 55678888899999999
Q ss_pred CCHHHHHHHHHHHHHC
Q psy767 173 NDMASAEGILTMMSQA 188 (902)
Q Consensus 173 g~~~~A~~l~~~M~~~ 188 (902)
|++++|+..|++....
T Consensus 75 g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 75 GRYEQGVELLLKIIAE 90 (117)
T ss_dssp TCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999988775
No 177
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=96.54 E-value=0.018 Score=64.82 Aligned_cols=130 Identities=11% Similarity=0.006 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCC--------------HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHH
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPN--------------RVTYQQLISNSKLISKYCQDGNIEGATKILE 148 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd--------------~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~ 148 (902)
...|..+-..|.+.|++++|...|++..+...... ...|..+ ..+|.+.|++++|+..|+
T Consensus 268 a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nl------a~~~~~~g~~~~A~~~~~ 341 (457)
T 1kt0_A 268 AAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNL------AMCYLKLREYTKAVECCD 341 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHH------HHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHH------HHHHHHhcCHHHHHHHHH
Confidence 45688889999999999999999999886422211 4667777 888999999999999999
Q ss_pred HhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHcCChhHHHH-HHHhcc
Q psy767 149 FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS-AQTYTKLMCGYAKHGDMDSIKT-KIPSLK 221 (902)
Q Consensus 149 ~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd-~~ty~~ll~a~~~~g~~~~a~~-l~~~~~ 221 (902)
...+.+ +.+...|..+-.+|...|++++|+..|++..+. .|+ ...+..+..++.+.++.+++.+ ++..|.
T Consensus 342 ~al~~~-p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l--~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f 413 (457)
T 1kt0_A 342 KALGLD-SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV--NPQNKAARLQISMCQKKAKEHNERDRRIYANMF 413 (457)
T ss_dssp HHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--C----CHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHhcC-CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988765 557788999999999999999999999999876 444 4577778888888888876653 444443
No 178
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=96.50 E-value=0.022 Score=53.54 Aligned_cols=105 Identities=12% Similarity=0.090 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHC--------CC--------CC-CHHHHHHHHHhHHHHHHHHHcCCHHHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQ--------GI--------EP-NRVTYQQLISNSKLISKYCQDGNIEGAT 144 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~--------g~--------~p-d~~t~~~ll~~~~li~~~~~~g~~~~A~ 144 (902)
....|......+.+.|++++|+..|.+.... .. .| +...|..+ ..+|.+.|++++|.
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nl------a~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANM------SQCYLNIGDLHEAE 83 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHH------HHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH------HHHHHhcCcHHHHH
Confidence 3566888889999999999999999987754 10 11 22456666 88888999999999
Q ss_pred HHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHH
Q psy767 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195 (902)
Q Consensus 145 ~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ 195 (902)
..++.....+ +.+...|..+..+|...|++++|...|+..... .|+..
T Consensus 84 ~~~~~al~~~-p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l--~p~~~ 131 (162)
T 3rkv_A 84 ETSSEVLKRE-ETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN--HPAAA 131 (162)
T ss_dssp HHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CGGGH
T ss_pred HHHHHHHhcC-CcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc--CCCCH
Confidence 9999988765 567788999999999999999999999998876 46544
No 179
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=96.48 E-value=0.05 Score=58.17 Aligned_cols=169 Identities=8% Similarity=-0.091 Sum_probs=117.8
Q ss_pred HHHHHhccccchhHHHHHHHHHHHhcccCCC-CCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHC-C-CchHHH
Q psy767 27 EVTTVLGALGAFLVLLVLLFVYLNSKWCSEP-SLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDN-E-HTFSPT 103 (902)
Q Consensus 27 ~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~-g-~~~~A~ 103 (902)
+|....+.+....+.+.-+|++-...+...| .++++...++.+.. .-+-+...|+.--..+.+. + ++++++
T Consensus 72 ~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~------~nPKny~aW~hR~wlL~~l~~~~~~~EL 145 (349)
T 3q7a_A 72 RALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAV------QNLKSYQVWHHRLLLLDRISPQDPVSEI 145 (349)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH------TTCCCHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred HHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH------hCCCcHHHHHHHHHHHHHhcCCChHHHH
Confidence 3444444443333334444555444444445 47788888888876 3344778899877777776 6 899999
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHH--------HHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCC-
Q psy767 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE--------GATKILEFMRDKTFPISEGVFNALIYGHSQAND- 174 (902)
Q Consensus 104 ~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~--------~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~- 174 (902)
++++.+.+...+ |-..|+.- .-++.+.|.++ ++++.++.+.+.+ +-|...|+-.-..+.+.+.
T Consensus 146 ~~~~k~L~~dpk-Ny~AW~~R------~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~d-p~N~SAW~~R~~lL~~l~~~ 217 (349)
T 3q7a_A 146 EYIHGSLLPDPK-NYHTWAYL------HWLYSHFSTLGRISEAQWGSELDWCNEMLRVD-GRNNSAWGWRWYLRVSRPGA 217 (349)
T ss_dssp HHHHHHTSSCTT-CHHHHHHH------HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHTTSTTC
T ss_pred HHHHHHHHhCCC-CHHHHHHH------HHHHHHhccccccchhhHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHhcccc
Confidence 999999865433 66666655 44444444444 8999999998877 5688999998888888876
Q ss_pred ------HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh
Q psy767 175 ------MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210 (902)
Q Consensus 175 ------~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~ 210 (902)
++++++.+.++..... -|...|+.+-..+.+.|..
T Consensus 218 ~~~~~~~~eELe~~~~aI~~~P-~n~SaW~Ylr~Ll~~~~~~ 258 (349)
T 3q7a_A 218 ETSSRSLQDELIYILKSIHLIP-HNVSAWNYLRGFLKHFSLP 258 (349)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCC
T ss_pred ccchHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHhcCCC
Confidence 7899999999988753 3778898877777777654
No 180
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=96.45 E-value=0.024 Score=50.49 Aligned_cols=90 Identities=13% Similarity=0.095 Sum_probs=69.5
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCH---HHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC----HHHHHHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISE---GVFNALIYGHSQANDMASAEGILTMMSQAGLEPS----AQTYTKLMCG 203 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~---~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd----~~ty~~ll~a 203 (902)
...+.+.|++++|...|+...... +.+. ..+..+..++.+.|++++|...|+...... |+ ...+..+..+
T Consensus 9 a~~~~~~~~~~~A~~~~~~~~~~~-p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~--p~~~~~~~~~~~la~~ 85 (129)
T 2xev_A 9 AFDALKNGKYDDASQLFLSFLELY-PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRY--PTHDKAAGGLLKLGLS 85 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-SSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHC-CCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHC--CCCcccHHHHHHHHHH
Confidence 566778899999999999887653 2233 477778888999999999999999988763 33 4567777788
Q ss_pred HHHcCChhHHHHHHHhcccC
Q psy767 204 YAKHGDMDSIKTKIPSLKPQ 223 (902)
Q Consensus 204 ~~~~g~~~~a~~l~~~~~~~ 223 (902)
+...|++++|...|+.+...
T Consensus 86 ~~~~g~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 86 QYGEGKNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHH
Confidence 88888888888877776553
No 181
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.43 E-value=0.0065 Score=68.94 Aligned_cols=120 Identities=8% Similarity=-0.055 Sum_probs=89.2
Q ss_pred HHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHH
Q psy767 91 RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170 (902)
Q Consensus 91 ~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~ 170 (902)
..+.+.|++++|.+.|++..+.. +-+..+|..+ ..+|.+.|++++|.+.+++..+.+ +-+...|..+..+|.
T Consensus 14 ~~~~~~g~~~~A~~~~~~Al~~~-p~~~~~~~~l------g~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~~~lg~~~~ 85 (477)
T 1wao_1 14 NDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNR------SLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRAASNM 85 (477)
T ss_dssp SSTTTTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHhC-CccHHHHHHH------HHHHHHhcCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHH
Confidence 34556789999999999988753 2257778888 889999999999999999988875 556788999999999
Q ss_pred hCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH--HHHcCChhHHHHHHHh
Q psy767 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCG--YAKHGDMDSIKTKIPS 219 (902)
Q Consensus 171 ~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a--~~~~g~~~~a~~l~~~ 219 (902)
+.|++++|++.|++..+.... +...+..+..+ +.+.|++++|.+.+++
T Consensus 86 ~~g~~~eA~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~g~~~~A~~~~~~ 135 (477)
T 1wao_1 86 ALGKFRAALRDYETVVKVKPH-DKDAKMKYQECNKIVKQKAFERAIAGDEH 135 (477)
T ss_dssp HHTCHHHHHHHHHHHHHHSTT-CTTHHHHHHHHHHHHHHHHHCCC------
T ss_pred HcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999998876321 23344444444 7788888888888773
No 182
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.31 E-value=0.029 Score=61.22 Aligned_cols=123 Identities=9% Similarity=0.024 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHC--------------CCCC-CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHH
Q psy767 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQ--------------GIEP-NRVTYQQLISNSKLISKYCQDGNIEGATKILE 148 (902)
Q Consensus 84 ~~yn~li~~~~~~g~~~~A~~l~~~M~~~--------------g~~p-d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~ 148 (902)
..|..+...|.+.|++++|+..|++..+. ...| +...|..+ ..+|.+.|++++|...++
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nl------a~~~~~~g~~~~A~~~~~ 297 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNI------GACKLKMSDWQGAVDSCL 297 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHH------HHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHH------HHHHHhccCHHHHHHHHH
Confidence 45778888899999999999999988751 0122 33456666 888889999999999999
Q ss_pred HhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHcCChhHHHH
Q psy767 149 FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP-SAQTYTKLMCGYAKHGDMDSIKT 215 (902)
Q Consensus 149 ~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~p-d~~ty~~ll~a~~~~g~~~~a~~ 215 (902)
...+.+ +-+...|..+..+|...|++++|++.|++..+. .| +...+..+...+...++.+++.+
T Consensus 298 ~al~~~-p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l--~P~~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 298 EALEID-PSNTKALYRRAQGWQGLKEYDQALADLKKAQEI--APEDKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp HHHTTC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhC-chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 988765 456788888999999999999999999998876 34 55566667777776666665543
No 183
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=96.31 E-value=0.0064 Score=52.64 Aligned_cols=95 Identities=7% Similarity=0.018 Sum_probs=72.9
Q ss_pred CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC---
Q psy767 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS--- 193 (902)
Q Consensus 117 d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd--- 193 (902)
+...+..+ ...+.+.|++++|...|+...... +.+...|..+..+|.+.|++++|+..|++..+. .|+
T Consensus 3 ~~~~~~~~------g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~ 73 (111)
T 2l6j_A 3 QFEKQKEQ------GNSLFKQGLYREAVHCYDQLITAQ-PQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY--TSTAEH 73 (111)
T ss_dssp HHHHHHHH------HHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS--CSSTTS
T ss_pred hHHHHHHH------HHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--CCCccH
Confidence 34456666 888889999999999999987764 557788999999999999999999999999876 454
Q ss_pred ----HHHHHHHHHHHHHcCChhHHHHHHHhc
Q psy767 194 ----AQTYTKLMCGYAKHGDMDSIKTKIPSL 220 (902)
Q Consensus 194 ----~~ty~~ll~a~~~~g~~~~a~~l~~~~ 220 (902)
...+..+..++...|+.+.+...++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 74 VAIRSKLQYRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhHhHHHHh
Confidence 445666666777777766665544443
No 184
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=96.26 E-value=0.022 Score=64.46 Aligned_cols=93 Identities=1% Similarity=-0.145 Sum_probs=70.6
Q ss_pred HHhCCCHHHHHHHHHHHHHC---CC---CCC-HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHh
Q psy767 169 HSQANDMASAEGILTMMSQA---GL---EPS-AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241 (902)
Q Consensus 169 ~~~~g~~~~A~~l~~~M~~~---g~---~pd-~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (902)
+...|++++|+.++++..+. -+ .|+ ..+++.|..+|...|++++|..+++
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~----------------------- 375 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYAR----------------------- 375 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH-----------------------
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH-----------------------
Confidence 55789999999999877543 12 222 3478888999999999999888776
Q ss_pred cCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 242 ~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~ 289 (902)
.|+.++....-...+-...+++.|-..|...|++++|..+|++
T Consensus 376 -----~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~ 418 (490)
T 3n71_A 376 -----RMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICK 418 (490)
T ss_dssp -----HHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -----HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3455555555444344467799999999999999999999987
No 185
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.22 E-value=0.0068 Score=68.78 Aligned_cols=121 Identities=10% Similarity=0.026 Sum_probs=79.6
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCh
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~ 210 (902)
...+.+.|++++|.+.|++..+.. +-+...|..+..+|.+.|++++|++.|++..+.. .-+..+|..+..+|...|++
T Consensus 13 g~~~~~~g~~~~A~~~~~~Al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~~~lg~~~~~~g~~ 90 (477)
T 1wao_1 13 ANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRAASNMALGKF 90 (477)
T ss_dssp SSSTTTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCH
Confidence 334556788888888888877654 4457788888888888888888888888888763 22456777777777777777
Q ss_pred hHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH--HHHcCCHHHHHHHHH
Q psy767 211 DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCG--YAKHGDMDSVRRLLA 288 (902)
Q Consensus 211 ~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a--~~~~g~~~~A~~lf~ 288 (902)
++|.+.+++..+ .. +.+...+..+..+ +.+.|++++|++.++
T Consensus 91 ~eA~~~~~~al~-----------------------------------~~-p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 91 RAALRDYETVVK-----------------------------------VK-PHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHHHHHHH-----------------------------------HS-TTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHH-----------------------------------hC-CCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 777666665433 21 2223344444444 788899999999988
Q ss_pred H
Q psy767 289 Q 289 (902)
Q Consensus 289 ~ 289 (902)
+
T Consensus 135 ~ 135 (477)
T 1wao_1 135 H 135 (477)
T ss_dssp -
T ss_pred c
Confidence 4
No 186
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=96.20 E-value=0.32 Score=51.58 Aligned_cols=132 Identities=11% Similarity=0.042 Sum_probs=84.6
Q ss_pred HHHHHHHHHHH---HHCCCch-HHHHHHHHHHHCCCCCCH-HHHHHHHHhHHHHHHHHHcC-------CHHHHHHHHHHh
Q psy767 83 ISHYNALLRVY---LDNEHTF-SPTDFLAKLESQGIEPNR-VTYQQLISNSKLISKYCQDG-------NIEGATKILEFM 150 (902)
Q Consensus 83 ~~~yn~li~~~---~~~g~~~-~A~~l~~~M~~~g~~pd~-~t~~~ll~~~~li~~~~~~g-------~~~~A~~l~~~m 150 (902)
+..|..+...+ .+.|.+. +|+.+++.+... .|+. ..|+.- ..++....+.. .+++++.+++.+
T Consensus 26 i~~y~~~~~~~~~~~~~~e~s~eaL~~t~~~L~~--nP~~ytaWn~R---r~iL~~l~~~~~~~~~~~~l~~EL~~~~~~ 100 (331)
T 3dss_A 26 LKLYQSATQAVFQKRQAGELDESVLELTSQILGA--NPDFATLWNCR---REVLQHLETEKSPEESAALVKAELGFLESC 100 (331)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHTT--CTTCHHHHHHH---HHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--CchhHHHHHHH---HHHHHHhcccccchhhhHHHHHHHHHHHHH
Confidence 44555554443 4566666 799999999954 4543 335443 11133333221 267888888888
Q ss_pred hhCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCC-hhHHHHHHHhcc
Q psy767 151 RDKTFPISEGVFNALIYGHSQAN--DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-MDSIKTKIPSLK 221 (902)
Q Consensus 151 ~~~~~~p~~~~yn~Li~~~~~~g--~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~-~~~a~~l~~~~~ 221 (902)
...+ |-+..+|+.---.+.+.| .+++++.+++.+.+.... |...|+.---.+...|. ++++.+.++.+.
T Consensus 101 L~~~-PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I 172 (331)
T 3dss_A 101 LRVN-PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLI 172 (331)
T ss_dssp HHHC-TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHhC-CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 7765 557788888777777777 488999999999887533 77788776666666666 354444444433
No 187
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=96.05 E-value=0.05 Score=61.24 Aligned_cols=97 Identities=8% Similarity=-0.030 Sum_probs=76.9
Q ss_pred HHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCC---------------HHHHHHHHHHHHhCCCHHHHHHHHH
Q psy767 119 VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS---------------EGVFNALIYGHSQANDMASAEGILT 183 (902)
Q Consensus 119 ~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~---------------~~~yn~Li~~~~~~g~~~~A~~l~~ 183 (902)
..|..+ -..|.+.|++++|...|+...+.. +.+ ...|+.+..+|.+.|++++|+..|+
T Consensus 269 ~~~~~~------G~~~~~~g~~~~A~~~y~~Al~~~-p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 341 (457)
T 1kt0_A 269 AIVKEK------GTVYFKGGKYMQAVIQYGKIVSWL-EMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 341 (457)
T ss_dssp HHHHHH------HHHHHHTTCHHHHHHHHHHHHHHH-TTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHH------HHHHHhCCCHHHHHHHHHHHHHHh-cccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 345556 888899999999999999987643 222 5788889999999999999999999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccC
Q psy767 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223 (902)
Q Consensus 184 ~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~ 223 (902)
+..+.. ..+...|..+..+|...|++++|...|+.....
T Consensus 342 ~al~~~-p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 342 KALGLD-SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV 380 (457)
T ss_dssp HHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHhcC-CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 998864 235678888888888888888887777766553
No 188
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=95.95 E-value=0.019 Score=50.59 Aligned_cols=83 Identities=13% Similarity=0.041 Sum_probs=48.4
Q ss_pred CCCHHHHHHHHHHHHHCCCC-C-CHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHH
Q psy767 172 ANDMASAEGILTMMSQAGLE-P-SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249 (902)
Q Consensus 172 ~g~~~~A~~l~~~M~~~g~~-p-d~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~ 249 (902)
.|++++|+..|++..+.+.. | +...|..+...|...|++++|...|+.
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~------------------------------ 52 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLAN------------------------------ 52 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH------------------------------
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHH------------------------------
Confidence 46666677777766664311 2 223455555556666666655555544
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy767 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 250 ~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m 290 (902)
..+.. +-+..+|..+..+|.+.|++++|+..|++.
T Consensus 53 -----al~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 87 (117)
T 3k9i_A 53 -----GVKQF-PNHQALRVFYAMVLYNLGRYEQGVELLLKI 87 (117)
T ss_dssp -----HHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred -----HHHhC-CCchHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 44332 345667777788888888888888888763
No 189
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=95.93 E-value=0.052 Score=50.84 Aligned_cols=93 Identities=8% Similarity=-0.007 Sum_probs=75.8
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhC-------CC----------CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC
Q psy767 131 ISKYCQDGNIEGATKILEFMRDK-------TF----------PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS 193 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~-------~~----------~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd 193 (902)
-..+.+.|++++|...|+..... +- +-+...|..+..+|.+.|++++|+..++...+.. ..+
T Consensus 18 G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~-p~~ 96 (162)
T 3rkv_A 18 GNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKRE-ETN 96 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-TTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcC-Ccc
Confidence 77888999999999999887654 11 2234678889999999999999999999998874 335
Q ss_pred HHHHHHHHHHHHHcCChhHHHHHHHhcccCC
Q psy767 194 AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224 (902)
Q Consensus 194 ~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~ 224 (902)
...|..+..+|...|++++|...|.......
T Consensus 97 ~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 127 (162)
T 3rkv_A 97 EKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhcHHHHHHHHHHHHhcC
Confidence 7788899999999999999999888776643
No 190
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=95.91 E-value=0.36 Score=51.21 Aligned_cols=219 Identities=9% Similarity=-0.021 Sum_probs=119.6
Q ss_pred HHcCCHH-HHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCC----------HHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q psy767 135 CQDGNIE-GATKILEFMRDKTFPISEGVFNALIYGHSQAND----------MASAEGILTMMSQAGLEPSAQTYTKLMCG 203 (902)
Q Consensus 135 ~~~g~~~-~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~----------~~~A~~l~~~M~~~g~~pd~~ty~~ll~a 203 (902)
.+.|.++ +|+.+++.+...+ |-+..+||.=-..+...|. +++++.+++.+..... -+..+|+.---.
T Consensus 40 ~~~~e~s~eaL~~t~~~L~~n-P~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~P-Kny~aW~hR~wl 117 (331)
T 3dss_A 40 RQAGELDESVLELTSQILGAN-PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNP-KSYGTWHHRCWL 117 (331)
T ss_dssp HHTTCCSHHHHHHHHHHHTTC-TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCT-TCHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHC-chhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHH
Confidence 3445544 6777777777655 3444555543322222222 4566666666665432 245555554444
Q ss_pred HHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCC-HHH
Q psy767 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-MDS 282 (902)
Q Consensus 204 ~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~-~~~ 282 (902)
+.+.++. .++++..+++.+.+.. +.|..+|+.---.+...|. +++
T Consensus 118 L~~l~~~---------------------------------~~~~EL~~~~k~l~~d-prNy~AW~~R~~vl~~l~~~~~e 163 (331)
T 3dss_A 118 LSRLPEP---------------------------------NWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAPAE 163 (331)
T ss_dssp HHHCSSC---------------------------------CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCHHH
T ss_pred HhccCcc---------------------------------cHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhCcCHHH
Confidence 4444420 2345555555555543 6677777777777777777 577
Q ss_pred HHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHc---
Q psy767 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH--- 359 (902)
Q Consensus 283 A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~--- 359 (902)
+++.+.++....+. |...|+.....+.+.
T Consensus 164 el~~~~~~I~~~p~------------------------------------------------N~SAW~~R~~ll~~l~~~ 195 (331)
T 3dss_A 164 ELAFTDSLITRNFS------------------------------------------------NYSSWHYRSCLLPQLHPQ 195 (331)
T ss_dssp HHHHHHHHHHHCSC------------------------------------------------CHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHCCC------------------------------------------------CHHHHHHHHHHHHHhhhc
Confidence 77777765432211 333333333333222
Q ss_pred -----------CCHHHHHHHHHH-cCCCCCccc-HHHHHHHHHHc-----------CChHHHHHHHHHcccCCCCCCCHH
Q psy767 360 -----------GDMDSIRRLLAQ-NGSSLVNGD-YLDIIHALAVS-----------GHGEYIDEIISKIQPGVGYSADAA 415 (902)
Q Consensus 360 -----------g~~~~A~~~~~~-m~~~~~~~~-~~~li~~~~~~-----------g~~~~A~~l~~~m~~~~g~~pd~~ 415 (902)
+.++++++.+.+ +...|...+ |+-+-..+.+. +.++++++.++++.+ ..||..
T Consensus 196 ~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle---~~pd~~ 272 (331)
T 3dss_A 196 PDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQE---LEPENK 272 (331)
T ss_dssp C------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHH---HCTTCH
T ss_pred cccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHh---hCcccc
Confidence 345667776665 444444444 55433333333 346788888998887 777764
Q ss_pred HHHHH-------HHHcCCHHHHHHHHHHHHhc
Q psy767 416 NHIYH-------LINKGQIDAAYRIVNTLARS 440 (902)
Q Consensus 416 t~i~~-------l~~~g~~~~A~~~~~~m~~~ 440 (902)
-.+.. +...|..+++...+.++.+.
T Consensus 273 w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (331)
T 3dss_A 273 WCLLTIILLMRALDPLLYEKETLQYFSTLKAV 304 (331)
T ss_dssp HHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhcccccHHHHHHHHHHHHHh
Confidence 22111 11356777788888777764
No 191
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=95.89 E-value=0.051 Score=59.20 Aligned_cols=91 Identities=10% Similarity=0.025 Sum_probs=69.4
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhC---------------CCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDK---------------TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~---------------~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ 195 (902)
...+.+.|++++|...|+...+. --+-+...|+.+..+|.+.|++++|+..+++..+.. .-+..
T Consensus 230 g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~-p~~~~ 308 (370)
T 1ihg_A 230 GNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID-PSNTK 308 (370)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-TTCHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC-chhHH
Confidence 78888999999999999887651 112245678888888889999999999999888763 22566
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHhccc
Q psy767 196 TYTKLMCGYAKHGDMDSIKTKIPSLKP 222 (902)
Q Consensus 196 ty~~ll~a~~~~g~~~~a~~l~~~~~~ 222 (902)
.|..+..+|...|++++|...|+...+
T Consensus 309 a~~~lg~~~~~~g~~~eA~~~l~~Al~ 335 (370)
T 1ihg_A 309 ALYRRAQGWQGLKEYDQALADLKKAQE 335 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 777788888888888877777666544
No 192
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=95.86 E-value=0.073 Score=49.73 Aligned_cols=98 Identities=5% Similarity=-0.146 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCC------CH-----HHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhh
Q psy767 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEP------NR-----VTYQQLISNSKLISKYCQDGNIEGATKILEFMRD 152 (902)
Q Consensus 84 ~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~p------d~-----~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~ 152 (902)
..+...-..+.+.|++++|+..|++..+..... +. ..|..+ -.++.+.|++++|+..++...+
T Consensus 12 ~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~------g~al~~Lgr~~eAl~~~~kAL~ 85 (159)
T 2hr2_A 12 YLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGL------AEALAGLRSFDEALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHH------HHHHHHCCCHHHHHHHHHHHHH
Confidence 446667777888999999999999988643220 22 267777 8899999999999999998876
Q ss_pred C-----CCCC-CHHHH----HHHHHHHHhCCCHHHHHHHHHHHHH
Q psy767 153 K-----TFPI-SEGVF----NALIYGHSQANDMASAEGILTMMSQ 187 (902)
Q Consensus 153 ~-----~~~p-~~~~y----n~Li~~~~~~g~~~~A~~l~~~M~~ 187 (902)
. .+.| +...| ...-.++...|++++|+..|+...+
T Consensus 86 l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 86 YFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVE 130 (159)
T ss_dssp HHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHh
Confidence 5 1134 44677 8888899999999999999988765
No 193
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=95.81 E-value=0.014 Score=62.75 Aligned_cols=148 Identities=7% Similarity=-0.054 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHH
Q psy767 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162 (902)
Q Consensus 83 ~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~y 162 (902)
...|..+...+.+.|++++|...|++.... .|+...+ ...|+.+++...+. ...|
T Consensus 179 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~--~p~~~~~-------------~~~~~~~~~~~~l~----------~~~~ 233 (338)
T 2if4_A 179 ADRRKMDGNSLFKEEKLEEAMQQYEMAIAY--MGDDFMF-------------QLYGKYQDMALAVK----------NPCH 233 (338)
T ss_dssp HHHHHHHHHHTCSSSCCHHHHHHHHHHHHH--SCHHHHH-------------TCCHHHHHHHHHHH----------THHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHH--hccchhh-------------hhcccHHHHHHHHH----------HHHH
Confidence 445777777888899999999999998754 3443311 11122222222110 1355
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHH-HHh
Q psy767 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL-ILV 241 (902)
Q Consensus 163 n~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~-~~~ 241 (902)
+.+..+|.+.|++++|+..|+...+.. .-+...|..+..+|...|++++|...|+......... ...+..+..+ ...
T Consensus 234 ~nla~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~-~~a~~~L~~l~~~~ 311 (338)
T 2if4_A 234 LNIAACLIKLKRYDEAIGHCNIVLTEE-EKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDD-KAIRRELRALAEQE 311 (338)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHH
Confidence 556666666666666666666665542 1244556666666666666666666666655443221 1122222222 222
Q ss_pred cCCHHHHHHHHHHHHH
Q psy767 242 SSDMASAEGILTMMSQ 257 (902)
Q Consensus 242 ~g~~~~A~~l~~~m~~ 257 (902)
.+..+.+..+|..|..
T Consensus 312 ~~~~~~a~~~~~~~l~ 327 (338)
T 2if4_A 312 KALYQKQKEMYKGIFK 327 (338)
T ss_dssp ----------------
T ss_pred HHHHHHHHHHHHHhhC
Confidence 4455566666666554
No 194
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=95.74 E-value=0.11 Score=48.53 Aligned_cols=99 Identities=7% Similarity=-0.084 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC--------H-----HHHHHHHHHHHHcCChhHHHHHHHhcccCCCc
Q psy767 160 GVFNALIYGHSQANDMASAEGILTMMSQAGLEPS--------A-----QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226 (902)
Q Consensus 160 ~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd--------~-----~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~ 226 (902)
..+...-..+.+.|++++|+..|+...+. .|+ . ..|..+-.++.+.|++++|+..++.
T Consensus 12 ~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l--~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~k------- 82 (159)
T 2hr2_A 12 YLALSDAQRQLVAGEYDEAAANCRRAMEI--SHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADK------- 82 (159)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH--HTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhh--CCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHH-------
Confidence 34555666777788888888888887765 333 2 2777788888888888888776653
Q ss_pred cchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC-HHHH----HHHHHHHHHcCCHHHHHHHHHHh
Q psy767 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS-AQTY----TKLMCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 227 ~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd-~~ty----~~LI~a~~~~g~~~~A~~lf~~m 290 (902)
|+++|+.-.+. .|+ ...| ...-.++...|++++|+..|++.
T Consensus 83 ---------------------AL~l~n~~~e~--~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kA 128 (159)
T 2hr2_A 83 ---------------------ALHYFNRRGEL--NQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKV 128 (159)
T ss_dssp ---------------------HHHHHHHHCCT--TSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ---------------------HHHhhhccccC--CCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHH
Confidence 44444444432 444 5577 88899999999999999999984
No 195
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=95.56 E-value=0.079 Score=46.19 Aligned_cols=81 Identities=20% Similarity=0.086 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHH
Q psy767 100 FSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAE 179 (902)
Q Consensus 100 ~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~ 179 (902)
++|+..|++..+.. +.+...+..+ ...|...|++++|...|+.....+ +.+...|..+..+|...|++++|.
T Consensus 2 ~~a~~~~~~al~~~-p~~~~~~~~l------g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~ 73 (115)
T 2kat_A 2 QAITERLEAMLAQG-TDNMLLRFTL------GKTYAEHEQFDAALPHLRAALDFD-PTYSVAWKWLGKTLQGQGDRAGAR 73 (115)
T ss_dssp CCHHHHHHHHHTTT-CCCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHhC-CCcHHHHHHH------HHHHHHccCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHcCCHHHHH
Confidence 35666676666543 2245566666 777777788888888777776654 445667777777777778888877
Q ss_pred HHHHHHHHC
Q psy767 180 GILTMMSQA 188 (902)
Q Consensus 180 ~l~~~M~~~ 188 (902)
..|+...+.
T Consensus 74 ~~~~~al~~ 82 (115)
T 2kat_A 74 QAWESGLAA 82 (115)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777776553
No 196
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=95.55 E-value=0.015 Score=62.61 Aligned_cols=115 Identities=7% Similarity=-0.129 Sum_probs=60.8
Q ss_pred HHHHHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHH
Q psy767 42 LVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121 (902)
Q Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~ 121 (902)
.+..+..+...+.+.|++++|...|..... +.|+...| ...++..++...+ . ...|
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~-------~~p~~~~~-------~~~~~~~~~~~~l---~-------~~~~ 233 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIA-------YMGDDFMF-------QLYGKYQDMALAV---K-------NPCH 233 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHH-------HSCHHHHH-------TCCHHHHHHHHHH---H-------THHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH-------Hhccchhh-------hhcccHHHHHHHH---H-------HHHH
Confidence 445566778889999999999999998776 33443311 1111122221111 0 0133
Q ss_pred HHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q psy767 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187 (902)
Q Consensus 122 ~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~ 187 (902)
..+ ..+|.+.|++++|...|+...+.+ +.+...|..+..+|...|++++|+..|+...+
T Consensus 234 ~nl------a~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~ 292 (338)
T 2if4_A 234 LNI------AACLIKLKRYDEAIGHCNIVLTEE-EKNPKALFRRGKAKAELGQMDSARDDFRKAQK 292 (338)
T ss_dssp HHH------HHHHHTTTCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC
T ss_pred HHH------HHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 334 445555555555555555554432 23444555555555555555555555555443
No 197
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=95.46 E-value=0.017 Score=49.76 Aligned_cols=95 Identities=8% Similarity=-0.015 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCC--
Q psy767 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS-- 158 (902)
Q Consensus 81 pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~-- 158 (902)
++...|..+...+...|++++|...|++..+.. +.+...|..+ ..+|.+.|++++|...|+...... +.+
T Consensus 2 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l------g~~~~~~g~~~~A~~~~~~al~~~-p~~~~ 73 (111)
T 2l6j_A 2 SQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQ-PQNPVGYSNK------AMALIKLGEYTQAIQMCQQGLRYT-STAEH 73 (111)
T ss_dssp THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHTSC-SSTTS
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHHHH------HHHHHHhcCHHHHHHHHHHHHHhC-CCccH
Confidence 356778899999999999999999999988753 2367778778 889999999999999999988754 223
Q ss_pred ----HHHHHHHHHHHHhCCCHHHHHHHHH
Q psy767 159 ----EGVFNALIYGHSQANDMASAEGILT 183 (902)
Q Consensus 159 ----~~~yn~Li~~~~~~g~~~~A~~l~~ 183 (902)
...+..+..++...|+.+.|...|+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 74 VAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 4455556666666666655554443
No 198
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=95.38 E-value=0.13 Score=42.16 Aligned_cols=81 Identities=14% Similarity=0.103 Sum_probs=59.9
Q ss_pred HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHH
Q psy767 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197 (902)
Q Consensus 118 ~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty 197 (902)
...+..+ ...+...|++++|...|+...... +.+...|..+...|.+.|++++|...|++..+.. .-+...+
T Consensus 9 ~~~~~~l------a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~~ 80 (91)
T 1na3_A 9 AEAWYNL------GNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAK 80 (91)
T ss_dssp HHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHH------HHHHHHccCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCHHHH
Confidence 3455556 777888899999999998887654 4467788888889999999999999999888763 2245566
Q ss_pred HHHHHHHHH
Q psy767 198 TKLMCGYAK 206 (902)
Q Consensus 198 ~~ll~a~~~ 206 (902)
..+-.++..
T Consensus 81 ~~l~~~~~~ 89 (91)
T 1na3_A 81 QNLGNAKQK 89 (91)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 555555544
No 199
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.23 E-value=0.28 Score=44.57 Aligned_cols=110 Identities=9% Similarity=-0.118 Sum_probs=80.1
Q ss_pred CCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHh----C
Q psy767 97 EHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ----A 172 (902)
Q Consensus 97 g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~----~ 172 (902)
+++++|+..|++..+.| .|+.. + -..|...+.++.|.+.|+...+.| +...++.|-..|.. .
T Consensus 9 ~d~~~A~~~~~~aa~~g-~~~a~----l------g~~y~~g~~~~~A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~ 74 (138)
T 1klx_A 9 KDLKKAIQYYVKACELN-EMFGC----L------SLVSNSQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVK 74 (138)
T ss_dssp HHHHHHHHHHHHHHHTT-CTTHH----H------HHHTCTTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSC
T ss_pred cCHHHHHHHHHHHHcCC-CHhhh----H------HHHHHcCCCHHHHHHHHHHHHcCC---CHHHHHHHHHHHHcCCCCC
Confidence 45678888888888777 33443 5 666777777888888888887776 45777777777877 7
Q ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH----cCChhHHHHHHHhcccC
Q psy767 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSIKTKIPSLKPQ 223 (902)
Q Consensus 173 g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~----~g~~~~a~~l~~~~~~~ 223 (902)
++.++|+.+|+...+.| +...+..|-..|.. .++.++|...|+...+.
T Consensus 75 ~d~~~A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 75 KDLRKAAQYYSKACGLN---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp CCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHcCC---CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 78888888888888775 56666777777776 67777777666665544
No 200
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=95.22 E-value=0.13 Score=42.11 Aligned_cols=83 Identities=12% Similarity=0.137 Sum_probs=66.1
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHH
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV 161 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~ 161 (902)
+...|..+...+...|++++|...|++..+.. +.+..++..+ ...+.+.|++++|...|+...+.+ +-+...
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l------~~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~ 79 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNL------GNAYYKQGDYDEAIEYYQKALELD-PNNAEA 79 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHC-TTCHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-CCCHHHHHHH------HHHHHHHhhHHHHHHHHHHHHhcC-CCCHHH
Confidence 35678888899999999999999999988754 2256677777 889999999999999999987764 445677
Q ss_pred HHHHHHHHHhC
Q psy767 162 FNALIYGHSQA 172 (902)
Q Consensus 162 yn~Li~~~~~~ 172 (902)
+..+-.++.+.
T Consensus 80 ~~~l~~~~~~~ 90 (91)
T 1na3_A 80 KQNLGNAKQKQ 90 (91)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 77766666543
No 201
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.96 E-value=0.37 Score=58.13 Aligned_cols=153 Identities=10% Similarity=0.051 Sum_probs=92.7
Q ss_pred HHHHCCCchHHHH-HHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHH
Q psy767 92 VYLDNEHTFSPTD-FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170 (902)
Q Consensus 92 ~~~~~g~~~~A~~-l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~ 170 (902)
.....+++++|.+ ++.. + |+......+ +..+.+.|..+.|.++.+.-. .- .....
T Consensus 608 ~~~~~~~~~~a~~~~l~~-----i-~~~~~~~~~------~~~l~~~~~~~~a~~~~~~~~--------~~----f~~~l 663 (814)
T 3mkq_A 608 TLTLRGEIEEAIENVLPN-----V-EGKDSLTKI------ARFLEGQEYYEEALNISPDQD--------QK----FELAL 663 (814)
T ss_dssp HHHHTTCHHHHHHHTGGG-----C-CCHHHHHHH------HHHHHHTTCHHHHHHHCCCHH--------HH----HHHHH
T ss_pred HHHHhCCHHHHHHHHHhc-----C-CchHHHHHH------HHHHHhCCChHHheecCCCcc--------hh----eehhh
Confidence 3446788888877 5421 1 112223556 788888999999887663211 11 23345
Q ss_pred hCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHH
Q psy767 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250 (902)
Q Consensus 171 ~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~ 250 (902)
..|++++|+++.+.+ .+...|..+...+.+.++++.|.+.|..+.. +..+..++...|+.+...+
T Consensus 664 ~~~~~~~A~~~~~~~------~~~~~W~~la~~al~~~~~~~A~~~y~~~~d---------~~~l~~l~~~~~~~~~~~~ 728 (814)
T 3mkq_A 664 KVGQLTLARDLLTDE------SAEMKWRALGDASLQRFNFKLAIEAFTNAHD---------LESLFLLHSSFNNKEGLVT 728 (814)
T ss_dssp HHTCHHHHHHHHTTC------CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC---------HHHHHHHHHHTTCHHHHHH
T ss_pred hcCCHHHHHHHHHhh------CcHhHHHHHHHHHHHcCCHHHHHHHHHHccC---------hhhhHHHHHHcCCHHHHHH
Confidence 678999998886543 3678999999999999999999888887654 3344444444555555555
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 251 l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~ 289 (902)
+-+.....| -++....+|.+.|++++|+++|.+
T Consensus 729 ~~~~a~~~~------~~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 729 LAKDAETTG------KFNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHTT------CHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHcC------chHHHHHHHHHcCCHHHHHHHHHH
Confidence 444444333 123333344445555555554443
No 202
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=94.94 E-value=1.3 Score=51.05 Aligned_cols=186 Identities=8% Similarity=-0.035 Sum_probs=120.5
Q ss_pred HHHHHHHHHH---HHHCCC-chHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCC----------HHHHHHHHH
Q psy767 83 ISHYNALLRV---YLDNEH-TFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN----------IEGATKILE 148 (902)
Q Consensus 83 ~~~yn~li~~---~~~~g~-~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~----------~~~A~~l~~ 148 (902)
+..|..++.. ..+.|. .++|++.++++...... +...|+.- -.++.+.|+ ++++++.++
T Consensus 25 ~~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~-~~taW~~R------~~~l~~l~~~~~~~~~~~~~~~eL~~~~ 97 (567)
T 1dce_A 25 LKLYQSATQAVFQKRQAGELDESVLELTSQILGANPD-FATLWNCR------REVLQHLETEKSPEESAALVKAELGFLE 97 (567)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHH------HHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCch-hHHHHHHH------HHHHHhcccccchhhhhhhHHHHHHHHH
Confidence 3445544433 334454 45789999999976422 44456655 444455555 899999999
Q ss_pred HhhhCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcC-ChhHHHHHHHhcccCCC
Q psy767 149 FMRDKTFPISEGVFNALIYGHSQAN--DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG-DMDSIKTKIPSLKPQSE 225 (902)
Q Consensus 149 ~m~~~~~~p~~~~yn~Li~~~~~~g--~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g-~~~~a~~l~~~~~~~~~ 225 (902)
.+.+.+ +-+..+|+.---.+.+.| +++++++.++.+.+.... |..+|+.---++.+.| .++++.+.++.+.+..+
T Consensus 98 ~~l~~~-pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p 175 (567)
T 1dce_A 98 SCLRVN-PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNF 175 (567)
T ss_dssp HHHHHC-TTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTC
T ss_pred HHHHhC-CCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCC
Confidence 998876 567788998888888999 779999999999998644 7889998888888888 78888888888877543
Q ss_pred ccchhhHHHHHHHHHhc--------------CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCC
Q psy767 226 LFLCFSFQLTNLLILVS--------------SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279 (902)
Q Consensus 226 ~~~~~~~~~~~~~~~~~--------------g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~ 279 (902)
. +...+.....++... +.++++.+.++...... +-|...|+-+-..+.+.+.
T Consensus 176 ~-n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~-P~~~saW~y~~~ll~~~~~ 241 (567)
T 1dce_A 176 S-NYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTD-PNDQSAWFYHRWLLGRAEP 241 (567)
T ss_dssp C-CHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHC-SSCSHHHHHHHHHHSCCCC
T ss_pred C-CccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhC-CCCccHHHHHHHHHhcCCC
Confidence 3 223333333332221 33455555555554432 3344455544444444433
No 203
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=94.71 E-value=0.19 Score=43.64 Aligned_cols=79 Identities=14% Similarity=-0.037 Sum_probs=62.7
Q ss_pred HHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcc
Q psy767 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221 (902)
Q Consensus 142 ~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~ 221 (902)
.|...|+...+.+ +.+...|..+...|...|++++|+..|++..... ..+...|..+..+|...|++++|...|+...
T Consensus 3 ~a~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 3 AITERLEAMLAQG-TDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFD-PTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CHHHHHHHHHTTT-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4667777776654 5577889999999999999999999999988764 2356688888888999999998888877654
Q ss_pred c
Q psy767 222 P 222 (902)
Q Consensus 222 ~ 222 (902)
.
T Consensus 81 ~ 81 (115)
T 2kat_A 81 A 81 (115)
T ss_dssp H
T ss_pred H
Confidence 4
No 204
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=94.34 E-value=0.27 Score=44.69 Aligned_cols=78 Identities=9% Similarity=-0.047 Sum_probs=52.7
Q ss_pred cCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH----cCChhH
Q psy767 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK----HGDMDS 212 (902)
Q Consensus 137 ~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~----~g~~~~ 212 (902)
.+++++|.+.|+...+.| .|+.. |-..|...+.+++|++.|+...+.| +...+..|-..|.. .++.++
T Consensus 8 ~~d~~~A~~~~~~aa~~g-~~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~ 79 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELN-EMFGC----LSLVSNSQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVKKDLRK 79 (138)
T ss_dssp HHHHHHHHHHHHHHHHTT-CTTHH----HHHHTCTTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred ccCHHHHHHHHHHHHcCC-CHhhh----HHHHHHcCCCHHHHHHHHHHHHcCC---CHHHHHHHHHHHHcCCCCCccHHH
Confidence 356788888888888877 23332 6666666677888888888888775 56666666666666 566665
Q ss_pred HHHHHHhccc
Q psy767 213 IKTKIPSLKP 222 (902)
Q Consensus 213 a~~l~~~~~~ 222 (902)
|...|+...+
T Consensus 80 A~~~~~~Aa~ 89 (138)
T 1klx_A 80 AAQYYSKACG 89 (138)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 5555554433
No 205
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=94.26 E-value=0.18 Score=42.72 Aligned_cols=64 Identities=14% Similarity=0.063 Sum_probs=43.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q psy767 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187 (902)
Q Consensus 117 d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~ 187 (902)
+...+..+ ...|.+.|++++|...|+...+.+ +-+...|..+-.+|.+.|++++|.+.|++..+
T Consensus 6 ~~~~~~~l------g~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 6 DPFTRYAL------AQEHLKHDNASRALALFEELVETD-PDYVGTYYHLGKLYERLDRTDDAIDTYAQGIE 69 (100)
T ss_dssp CHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHH------HHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 34455555 667777777777777777766654 33456677777777777777777777776654
No 206
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=93.85 E-value=0.24 Score=54.92 Aligned_cols=89 Identities=10% Similarity=-0.030 Sum_probs=60.2
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCC---CCC----CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC-----C-CCCCH-HH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKT---FPI----SEGVFNALIYGHSQANDMASAEGILTMMSQA-----G-LEPSA-QT 196 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~---~~p----~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~-----g-~~pd~-~t 196 (902)
+.-+.+.|++++|+.+++...+.. +.| ...+++.|..+|...|++++|+.++++.... | -.|+. .+
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~ 373 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQ 373 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHH
Confidence 445566788888888887765421 222 2456788888888888888888888776532 2 13333 36
Q ss_pred HHHHHHHHHHcCChhHHHHHHHh
Q psy767 197 YTKLMCGYAKHGDMDSIKTKIPS 219 (902)
Q Consensus 197 y~~ll~a~~~~g~~~~a~~l~~~ 219 (902)
++.|...|...|++++|..++++
T Consensus 374 l~nLa~~~~~~g~~~eA~~~~~~ 396 (429)
T 3qwp_A 374 VMKVGKLQLHQGMFPQAMKNLRL 396 (429)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHH
Confidence 77777888888888887777664
No 207
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=93.74 E-value=0.25 Score=54.69 Aligned_cols=92 Identities=11% Similarity=-0.064 Sum_probs=66.4
Q ss_pred hCCCHHHHHHHHHHHHHC---CCCCC----HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcC
Q psy767 171 QANDMASAEGILTMMSQA---GLEPS----AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243 (902)
Q Consensus 171 ~~g~~~~A~~l~~~M~~~---g~~pd----~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 243 (902)
..|++++|+.++++..+. -+.|+ ..+++.|..+|...|++++|..++++
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~------------------------ 365 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQK------------------------ 365 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHH------------------------
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHH------------------------
Confidence 357888999988877542 12232 24788888888888999888887774
Q ss_pred CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy767 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 244 ~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m 290 (902)
|+.+++...-...+-...+|+.|-..|...|++++|+.+|++.
T Consensus 366 ----aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~A 408 (433)
T 3qww_A 366 ----IIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKA 408 (433)
T ss_dssp ----HHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----HHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 4445555543333334567999999999999999999999873
No 208
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=93.52 E-value=0.13 Score=47.99 Aligned_cols=102 Identities=9% Similarity=-0.087 Sum_probs=78.0
Q ss_pred HHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCC----------HHHHHHHHHHhhhCCCCCCHHHHH
Q psy767 94 LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN----------IEGATKILEFMRDKTFPISEGVFN 163 (902)
Q Consensus 94 ~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~----------~~~A~~l~~~m~~~~~~p~~~~yn 163 (902)
.+.+.+++|...++...+... -+...|..+ -.++...++ +++|...|++..+.+ |-+...|.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P-~~aea~~n~------G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld-P~~~~A~~ 84 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNP-LDADNLTRW------GGVLLELSQFHSISDAKQMIQEAITKFEEALLID-PKKDEAVW 84 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-TCHHHHHHH------HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC-TTCHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCC-CCHHHHHHH------HHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC-cCcHHHHH
Confidence 345668899999999887642 267777777 666666655 469999999988876 55678899
Q ss_pred HHHHHHHhCC-----------CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q psy767 164 ALIYGHSQAN-----------DMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205 (902)
Q Consensus 164 ~Li~~~~~~g-----------~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~ 205 (902)
.+-.+|...| ++++|++.|++..+. .|+...|...+...-
T Consensus 85 ~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l--~P~~~~y~~al~~~~ 135 (158)
T 1zu2_A 85 CIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE--QPDNTHYLKSLEMTA 135 (158)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh--CCCCHHHHHHHHHHH
Confidence 9999998774 899999999999986 788777766555433
No 209
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=93.07 E-value=0.38 Score=40.68 Aligned_cols=65 Identities=15% Similarity=0.057 Sum_probs=55.6
Q ss_pred CCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhh
Q psy767 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRD 152 (902)
Q Consensus 81 pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~ 152 (902)
-+...|..+...|...|++++|...|++..+.... +...|..+ ..+|.+.|++++|...|+...+
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~l------g~~~~~~g~~~~A~~~~~~al~ 69 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHL------GKLYERLDRTDDAIDTYAQGIE 69 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHH------HHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHH------HHHHHHcCCHHHHHHHHHHHHh
Confidence 46788999999999999999999999999876432 45677788 9999999999999999998654
No 210
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=92.92 E-value=0.39 Score=53.24 Aligned_cols=97 Identities=7% Similarity=-0.079 Sum_probs=70.8
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHCC---CCCC----HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHH
Q psy767 166 IYGHSQANDMASAEGILTMMSQAG---LEPS----AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL 238 (902)
Q Consensus 166 i~~~~~~g~~~~A~~l~~~M~~~g---~~pd----~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~ 238 (902)
+..+.+.|++++|+.++++..+.. +.|+ ..+++.|..+|...|++++|..++++
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~------------------- 354 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTR------------------- 354 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHH-------------------
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHH-------------------
Confidence 455667889999999998887541 2232 34778888888889999988887764
Q ss_pred HHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy767 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 239 ~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m 290 (902)
++.++....-...+-...+++.|-..|...|++++|+.+|++.
T Consensus 355 ---------~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~A 397 (429)
T 3qwp_A 355 ---------TMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLA 397 (429)
T ss_dssp ---------HHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ---------HHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 4445555443333334567899999999999999999999873
No 211
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=92.88 E-value=1.9 Score=49.52 Aligned_cols=117 Identities=9% Similarity=-0.018 Sum_probs=74.6
Q ss_pred HHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCC----------HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCC
Q psy767 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQAND----------MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 209 (902)
Q Consensus 140 ~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~----------~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~ 209 (902)
-++|++.++.+...+ +-+..+|+.--.++...|+ ++++++.++.+.+...+ +..+|+.---++.+.++
T Consensus 45 ~eeal~~~~~~l~~n-P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~ 122 (567)
T 1dce_A 45 DESVLELTSQILGAN-PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPE 122 (567)
T ss_dssp SHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHHHHC-chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccc
Confidence 456777777777655 4455667665555555555 77777777777766422 55566655555555551
Q ss_pred hhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcC-CHHHHHHHHH
Q psy767 210 MDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG-DMDSVRRLLA 288 (902)
Q Consensus 210 ~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g-~~~~A~~lf~ 288 (902)
. +++++...++.+.+.. +.|..+|+.--..+.+.| .++++++.+.
T Consensus 123 ~---------------------------------~~~~el~~~~k~l~~d-~~N~~aW~~R~~~l~~l~~~~~~el~~~~ 168 (567)
T 1dce_A 123 P---------------------------------NWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAPAEELAFTD 168 (567)
T ss_dssp C---------------------------------CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred c---------------------------------cHHHHHHHHHHHHhhc-cccccHHHHHHHHHHHcCCChHHHHHHHH
Confidence 1 2345555555555543 567888888877888888 7888888887
Q ss_pred Hhcc
Q psy767 289 QSGS 292 (902)
Q Consensus 289 ~m~~ 292 (902)
++..
T Consensus 169 ~~I~ 172 (567)
T 1dce_A 169 SLIT 172 (567)
T ss_dssp TTTT
T ss_pred HHHH
Confidence 7543
No 212
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=92.66 E-value=0.43 Score=52.81 Aligned_cols=86 Identities=12% Similarity=-0.087 Sum_probs=66.1
Q ss_pred CCCchHHHHHHHHHHH---CCCCCC----HHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhh-------CCCCCCHHH
Q psy767 96 NEHTFSPTDFLAKLES---QGIEPN----RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRD-------KTFPISEGV 161 (902)
Q Consensus 96 ~g~~~~A~~l~~~M~~---~g~~pd----~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~-------~~~~p~~~~ 161 (902)
.|++++|..++++..+ .-+.|+ ..+++.+ ..+|...|++++|+.++++... .+.+-...+
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nL------a~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~ 384 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQA------MGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASM 384 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHH------HHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHH
Confidence 5789999999998765 223343 2455566 9999999999999999988643 122223467
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHH
Q psy767 162 FNALIYGHSQANDMASAEGILTMMSQ 187 (902)
Q Consensus 162 yn~Li~~~~~~g~~~~A~~l~~~M~~ 187 (902)
||.|-..|...|++++|+.+|++..+
T Consensus 385 l~nLa~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 385 WLKLGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 99999999999999999999998754
No 213
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.28 E-value=3 Score=50.07 Aligned_cols=143 Identities=14% Similarity=0.051 Sum_probs=93.6
Q ss_pred HHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHH
Q psy767 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165 (902)
Q Consensus 86 yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~L 165 (902)
...++..+.+.|.+++|+++.+.-. .- .......|+++.|.++.+.+ .+...|..|
T Consensus 632 ~~~~~~~l~~~~~~~~a~~~~~~~~------------~~------f~~~l~~~~~~~A~~~~~~~------~~~~~W~~l 687 (814)
T 3mkq_A 632 LTKIARFLEGQEYYEEALNISPDQD------------QK------FELALKVGQLTLARDLLTDE------SAEMKWRAL 687 (814)
T ss_dssp HHHHHHHHHHTTCHHHHHHHCCCHH------------HH------HHHHHHHTCHHHHHHHHTTC------CCHHHHHHH
T ss_pred HHHHHHHHHhCCChHHheecCCCcc------------hh------eehhhhcCCHHHHHHHHHhh------CcHhHHHHH
Confidence 3778888888899888887763211 11 34456789999999987554 356899999
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCH
Q psy767 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM 245 (902)
Q Consensus 166 i~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 245 (902)
...+.+.|+++.|.+.|..+.. |..+...|...++.+...++-+.....+ .+.....++...|++
T Consensus 688 a~~al~~~~~~~A~~~y~~~~d---------~~~l~~l~~~~~~~~~~~~~~~~a~~~~------~~~~A~~~~~~~g~~ 752 (814)
T 3mkq_A 688 GDASLQRFNFKLAIEAFTNAHD---------LESLFLLHSSFNNKEGLVTLAKDAETTG------KFNLAFNAYWIAGDI 752 (814)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTC---------HHHHHHHHHHTTCHHHHHHHHHHHHHTT------CHHHHHHHHHHHTCH
T ss_pred HHHHHHcCCHHHHHHHHHHccC---------hhhhHHHHHHcCCHHHHHHHHHHHHHcC------chHHHHHHHHHcCCH
Confidence 9999999999999999998753 3344555555666665544433333221 112222233334555
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy767 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 246 ~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~ 289 (902)
++|. ..|.+.+++++|..+-+.
T Consensus 753 ~~a~----------------------~~~~~~~~~~~A~~lA~~ 774 (814)
T 3mkq_A 753 QGAK----------------------DLLIKSQRFSEAAFLGST 774 (814)
T ss_dssp HHHH----------------------HHHHHTTCHHHHHHHHHH
T ss_pred HHHH----------------------HHHHHcCChHHHHHHHHH
Confidence 5554 455566778888887765
No 214
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=91.97 E-value=0.49 Score=39.46 Aligned_cols=58 Identities=17% Similarity=0.214 Sum_probs=49.6
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHCC
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEG-VFNALIYGHSQANDMASAEGILTMMSQAG 189 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~-~yn~Li~~~~~~g~~~~A~~l~~~M~~~g 189 (902)
...+.+.|++++|...|+...+.+ +.+.. .|..+-.+|...|++++|++.|++..+..
T Consensus 7 a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 65 (99)
T 2kc7_A 7 IKELINQGDIENALQALEEFLQTE-PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELN 65 (99)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHC-SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 566788999999999999988764 44667 88889999999999999999999998864
No 215
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=90.87 E-value=6.2 Score=37.20 Aligned_cols=49 Identities=16% Similarity=0.102 Sum_probs=28.1
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M 185 (902)
......+|+++.|.++.+.+ -+...|..|-....+.|+++-|.+.|...
T Consensus 12 F~LAL~lg~l~~A~e~a~~l------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 12 FDLALEYGNLDAALDEAKKL------NDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHH------CCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHhcCCHHHHHHHHHHh------CCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 45555566666666665543 23455666666666666666666655544
No 216
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=90.79 E-value=0.33 Score=45.19 Aligned_cols=71 Identities=8% Similarity=-0.072 Sum_probs=56.8
Q ss_pred HHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCH----------HHHHHHHHHHHHCCCCC-CHHHHHHHHHH
Q psy767 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM----------ASAEGILTMMSQAGLEP-SAQTYTKLMCG 203 (902)
Q Consensus 135 ~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~----------~~A~~l~~~M~~~g~~p-d~~ty~~ll~a 203 (902)
.+.+.+++|.+.++...+.+ |-+...|+.+-.++...+++ ++|+..|++..+.. | +..+|..+-.+
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~-P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld--P~~~~A~~~LG~a 89 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSN-PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID--PKKDEAVWCIGNA 89 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC--cCcHHHHHHHHHH
Confidence 45567889999999888776 66888999888888887764 59999999998874 4 55688888888
Q ss_pred HHHcC
Q psy767 204 YAKHG 208 (902)
Q Consensus 204 ~~~~g 208 (902)
|...|
T Consensus 90 y~~lg 94 (158)
T 1zu2_A 90 YTSFA 94 (158)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88775
No 217
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=89.61 E-value=0.1 Score=55.01 Aligned_cols=36 Identities=36% Similarity=0.671 Sum_probs=25.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC-ccchhh
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP-DEMQYE 886 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 886 (902)
+||+.||.+|.+.+++++||||.++++..+ .++...
T Consensus 267 ~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~~~~~~ 303 (311)
T 4agu_A 267 GCLHMDPTERLTCEQLLHHPYFENIREIEDLAKEHDK 303 (311)
T ss_dssp HHCCSSTTTSCCHHHHHTSGGGTTCC-----------
T ss_pred HHccCChhhcCCHHHHhcChHHHhccCHHHHHHhhcc
Confidence 899999999999999999999999998876 555443
No 218
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=89.42 E-value=1.2 Score=36.98 Aligned_cols=81 Identities=9% Similarity=0.040 Sum_probs=57.8
Q ss_pred HHHHHHHCCCchHHHHHHHHHHHCCCCCCHH-HHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHH
Q psy767 89 LLRVYLDNEHTFSPTDFLAKLESQGIEPNRV-TYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167 (902)
Q Consensus 89 li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~-t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~ 167 (902)
....+.+.|++++|...|++..+... .+.. .|..+ ..+|...|++++|...|+...+.+ +-+...+..
T Consensus 6 ~a~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~~l------g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~--- 74 (99)
T 2kc7_A 6 TIKELINQGDIENALQALEEFLQTEP-VGKDEAYYLM------GNAYRKLGDWQKALNNYQSAIELN-PDSPALQAR--- 74 (99)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCS-STHHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHC-TTSTHHHHH---
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCC-CcHHHHHHHH------HHHHHHcCCHHHHHHHHHHHHhcC-CCcHHHHHH---
Confidence 34567788999999999999987532 2456 77777 888999999999999999988764 333344421
Q ss_pred HHHhCCCHHHHHHHHHHH
Q psy767 168 GHSQANDMASAEGILTMM 185 (902)
Q Consensus 168 ~~~~~g~~~~A~~l~~~M 185 (902)
+.+.+|...|++.
T Consensus 75 -----~~~~~a~~~~~~~ 87 (99)
T 2kc7_A 75 -----KMVMDILNFYNKD 87 (99)
T ss_dssp -----HHHHHHHHHHCCT
T ss_pred -----HHHHHHHHHHHHH
Confidence 4455555555443
No 219
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=88.96 E-value=2.9 Score=44.62 Aligned_cols=63 Identities=14% Similarity=0.057 Sum_probs=43.1
Q ss_pred chhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhcc
Q psy767 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292 (902)
Q Consensus 228 ~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~ 292 (902)
+...+..+...+...|+++.|...+++....+ |+...|..+-..+.-.|++++|.+.|.+...
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--~s~~a~~llG~~~~~~G~~~eA~e~~~~Alr 338 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLE--MSWLNYVLLGKVYEMKGMNREAADAYLTAFN 338 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 44455555555555677777777777777764 6777776777777788888888888876544
No 220
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=88.68 E-value=16 Score=34.35 Aligned_cols=104 Identities=10% Similarity=0.140 Sum_probs=70.9
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccH
Q psy767 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315 (902)
Q Consensus 236 ~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~ 315 (902)
..+...+|+++.|.++.+++ .+...|..|-....+.|+++-|.+.|... .|+..+.-++...|+.+.+
T Consensus 12 F~LAL~lg~l~~A~e~a~~l------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~------~D~~~L~~Ly~~tg~~e~L 79 (177)
T 3mkq_B 12 FDLALEYGNLDAALDEAKKL------NDSITWERLIQEALAQGNASLAEMIYQTQ------HSFDKLSFLYLVTGDVNKL 79 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHH------CCHHHHHHHHHHHHHTTCHHHHHHHHHHT------TCHHHHHHHHHHHTCHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHh------CCHHHHHHHHHHHHHcCChHHHHHHHHHh------CCHHHHHHHHHHhCCHHHH
Confidence 34455688999999988776 46889999999999999999999999984 3556666666666665555
Q ss_pred HHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc
Q psy767 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372 (902)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m 372 (902)
.....+. ...| -++.....+.-.|+++++.++|.+.
T Consensus 80 ~kla~iA---------------~~~g------~~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 80 SKMQNIA---------------QTRE------DFGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHH---------------HHTT------CHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHH---------------HHCc------cHHHHHHHHHHcCCHHHHHHHHHHC
Confidence 4443321 1111 1344455566667777777776653
No 221
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.09 E-value=2.7 Score=35.05 Aligned_cols=66 Identities=9% Similarity=0.079 Sum_probs=44.1
Q ss_pred CHHHHHHHHHhHHHHHHHHHcCC---HHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCC
Q psy767 117 NRVTYQQLISNSKLISKYCQDGN---IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189 (902)
Q Consensus 117 d~~t~~~ll~~~~li~~~~~~g~---~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g 189 (902)
|...+..+ ..++...++ .++|..+|++....+ +-+......+-..+.+.|++++|+..|+.+.+..
T Consensus 5 ~~~~~~~~------a~al~~~~~~~~~~~A~~~l~~AL~~d-p~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 5 TATQLAAK------ATTLYYLHKQAMTDEVSLLLEQALQLE-PYNEAALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp CHHHHHHH------HHHHHHTTTTCCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred CHHHHHHH------HHHHHHhcCCCCCHHHHHHHHHHHHHC-cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 44455555 555544433 577777777777665 4556667777777777888888888888877763
No 222
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.01 E-value=6.3 Score=32.68 Aligned_cols=67 Identities=12% Similarity=0.060 Sum_probs=52.9
Q ss_pred CCCHHHHHHHHHHHHHCCC---chHHHHHHHHHHHCCCCC-CHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCC
Q psy767 80 PLDISHYNALLRVYLDNEH---TFSPTDFLAKLESQGIEP-NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT 154 (902)
Q Consensus 80 ~pd~~~yn~li~~~~~~g~---~~~A~~l~~~M~~~g~~p-d~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~ 154 (902)
+.|...|..+..++...++ .++|..+|++..+. .| +......+ -..+.+.|++++|...|+.+.+.+
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~--dp~~~rA~~~l------g~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQL--EPYNEAALSLI------ANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH--CTTCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH--CcCCHHHHHHH------HHHHHHcCCHHHHHHHHHHHHhhC
Confidence 4577778888888765544 78999999999875 34 45555556 788899999999999999998875
No 223
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=85.29 E-value=5.5 Score=36.54 Aligned_cols=84 Identities=10% Similarity=0.068 Sum_probs=62.1
Q ss_pred HHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCC---CHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHcCChhHHH
Q psy767 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQAN---DMASAEGILTMMSQAGLEP--SAQTYTKLMCGYAKHGDMDSIK 214 (902)
Q Consensus 140 ~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g---~~~~A~~l~~~M~~~g~~p--d~~ty~~ll~a~~~~g~~~~a~ 214 (902)
+..+.+-|.+....| +++..+.-.+-.++++++ +.++++.+|++..+.+ .| ....+..|--+|.+.|++++|.
T Consensus 14 l~~~~~~y~~e~~~~-~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-~p~~~rd~lY~LAv~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAG-SVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHHHHHHHTT-CCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHccC-CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CccchHHHHHHHHHHHHHccCHHHHH
Confidence 455666677666666 467778777888888888 6679999999988864 24 2445566777889999999999
Q ss_pred HHHHhcccCCC
Q psy767 215 TKIPSLKPQSE 225 (902)
Q Consensus 215 ~l~~~~~~~~~ 225 (902)
+.++.+.+..+
T Consensus 92 ~y~~~lL~ieP 102 (152)
T 1pc2_A 92 KYVRGLLQTEP 102 (152)
T ss_dssp HHHHHHHHHCT
T ss_pred HHHHHHHhcCC
Confidence 88888776443
No 224
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=84.90 E-value=7.3 Score=35.73 Aligned_cols=91 Identities=14% Similarity=0.103 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcC---CHHHHHHHHHHhhhCCCCC--CHHHHHHHHHHHHhCCC
Q psy767 100 FSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG---NIEGATKILEFMRDKTFPI--SEGVFNALIYGHSQAND 174 (902)
Q Consensus 100 ~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g---~~~~A~~l~~~m~~~~~~p--~~~~yn~Li~~~~~~g~ 174 (902)
..+.+-|.+....|. ++..+...+ ..++++.+ +++++..+|+...+.+ .| +...+-.|--+|.+.|+
T Consensus 15 ~~~~~~y~~e~~~~~-~~~~~~F~y------a~~Lv~S~~~~~~~~gI~lLe~ll~~~-~p~~~rd~lY~LAv~~~kl~~ 86 (152)
T 1pc2_A 15 LKFEKKFQSEKAAGS-VSKSTQFEY------AWCLVRSKYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKE 86 (152)
T ss_dssp HHHHHHHHHHHHTTC-CCHHHHHHH------HHHHHTCSSHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHccCC-CcHHHHHHH------HHHHHcCCCHHHHHHHHHHHHHHHhcC-CccchHHHHHHHHHHHHHccC
Confidence 345566666666554 566666666 77788888 6779999999988765 34 23444456677899999
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHH
Q psy767 175 MASAEGILTMMSQAGLEPSAQTYTKL 200 (902)
Q Consensus 175 ~~~A~~l~~~M~~~g~~pd~~ty~~l 200 (902)
+++|.+.++...+. .|+..--..+
T Consensus 87 Y~~A~~y~~~lL~i--eP~n~QA~~L 110 (152)
T 1pc2_A 87 YEKALKYVRGLLQT--EPQNNQAKEL 110 (152)
T ss_dssp HHHHHHHHHHHHHH--CTTCHHHHHH
T ss_pred HHHHHHHHHHHHhc--CCCCHHHHHH
Confidence 99999999999986 7765433333
No 225
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=84.55 E-value=0.64 Score=48.72 Aligned_cols=26 Identities=19% Similarity=0.519 Sum_probs=22.9
Q ss_pred CCCCCCcchhhhH-----HHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSC-----DQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.++ |++++||||.++.
T Consensus 259 ~~L~~dP~~R~ta~~~~~~eil~Hp~f~~id 289 (304)
T 3ubd_A 259 MLFKRNPANRLGAGPDGVEEIKRHSFFSTID 289 (304)
T ss_dssp HHTCSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred HHcccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence 6889999999984 8999999998873
No 226
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=84.26 E-value=0.51 Score=48.65 Aligned_cols=23 Identities=30% Similarity=0.598 Sum_probs=21.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCcc
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFN 873 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~ 873 (902)
+||+.||.+|.+++++++||||.
T Consensus 245 ~~L~~dP~~R~s~~eil~hpw~k 267 (275)
T 3hyh_A 245 RMLIVNPLNRISIHEIMQDDWFK 267 (275)
T ss_dssp HHSCSSGGGSCCHHHHHHCHHHH
T ss_pred HHccCChhHCcCHHHHHcCcccc
Confidence 78999999999999999999994
No 227
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=83.94 E-value=0.25 Score=53.40 Aligned_cols=26 Identities=31% Similarity=0.649 Sum_probs=23.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
++|..||.+|.++++.++||||.++.
T Consensus 335 ~lL~~dP~~R~ta~eaL~Hp~f~~i~ 360 (361)
T 4f9c_A 335 KLLDLNPASRITAEEALLHPFFKDMS 360 (361)
T ss_dssp HHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred HHCcCChhHCcCHHHHhcCcccCCCC
Confidence 78999999999999999999998763
No 228
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=83.34 E-value=0.96 Score=47.46 Aligned_cols=27 Identities=30% Similarity=0.689 Sum_probs=23.3
Q ss_pred CCCCCCcchhhhHHH------hhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQ------LLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 877 (902)
+||..||.+|.+++| +++||||.++-.
T Consensus 267 ~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw 299 (311)
T 4aw0_A 267 KLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299 (311)
T ss_dssp HHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred HHccCCHhHCcChHHHcCCHHHHCCCCcCCCCH
Confidence 678999999999998 589999998754
No 229
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=82.90 E-value=15 Score=32.72 Aligned_cols=137 Identities=11% Similarity=0.102 Sum_probs=88.3
Q ss_pred HHcCCHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCChHHHHHHHHHcccCCCCCC--CHHHHHHHHHHcCCHHHHHHHH
Q psy767 357 AKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSA--DAANHIYHLINKGQIDAAYRIV 434 (902)
Q Consensus 357 ~~~g~~~~A~~~~~~m~~~~~~~~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~p--d~~t~i~~l~~~g~~~~A~~~~ 434 (902)
.-.|.+++..++..+.-.......||.+|--....-+-+-..++++.+-.-..+.+ +..+++..+.+.+...
T Consensus 18 ildG~v~qGveii~k~~~ssni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis~C~NlKrVi~C~~~~n~~s------ 91 (172)
T 1wy6_A 18 LLDGYIDEGVKIVLEITKSSTKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDKCQNLKSVVECGVINNTLN------ 91 (172)
T ss_dssp HHTTCHHHHHHHHHHHHHHSCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGGCSCTHHHHHHHHHTTCCC------
T ss_pred HHhhhHHHHHHHHHHHcCCCCccccceeeeecchhhchhHHHHHHHHHhhhcCcHhhhcHHHHHHHHHHhcchH------
Confidence 34577888888887754443444577777777777777777777777765444444 2223344333333211
Q ss_pred HHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHH-HHHHHHhcCChHHHHHHHHHHHHccCCCCCccchHHHHH
Q psy767 435 NTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAAN-HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLV 513 (902)
Q Consensus 435 ~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-li~~~~k~g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li 513 (902)
.... .+..+...|+-+.-.++...+..... .++...--+.
T Consensus 92 ------------------------------------e~vd~ALd~lv~~~KkDqLdki~~~~l~n~~---~~~~~l~kia 132 (172)
T 1wy6_A 92 ------------------------------------EHVNKALDILVIQGKRDKLEEIGREILKNNE---VSASILVAIA 132 (172)
T ss_dssp ------------------------------------HHHHHHHHHHHHTTCHHHHHHHHHHHC--CC---SCHHHHHHHH
T ss_pred ------------------------------------HHHHHHHHHHHHhccHhHHHHHHHHHhccCC---CChHHHHHHH
Confidence 2233 45567788888888888887644322 1345566788
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHCCCC
Q psy767 514 RHMVKTNQPIDKVLAVCHRLTDENLH 539 (902)
Q Consensus 514 ~~~~~~g~~~~~A~~l~~~m~~~g~~ 539 (902)
.+|.+.|. ..+|.+++.+.-+.|++
T Consensus 133 ~Ay~Klg~-~r~a~eLl~~AC~kG~k 157 (172)
T 1wy6_A 133 NALRRVGD-ERDATTLLIEACKKGEK 157 (172)
T ss_dssp HHHHHTTC-HHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcc-hhhHHHHHHHHHHhhhH
Confidence 89999998 89999999998888874
No 230
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.37 E-value=63 Score=35.43 Aligned_cols=167 Identities=13% Similarity=0.149 Sum_probs=87.6
Q ss_pred HHHHHHHHHcCChHHHHHHHHHcccC-CCCCCCHHH------HHHHHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhH
Q psy767 382 LDIIHALAVSGHGEYIDEIISKIQPG-VGYSADAAN------HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFL 454 (902)
Q Consensus 382 ~~li~~~~~~g~~~~A~~l~~~m~~~-~g~~pd~~t------~i~~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~ 454 (902)
..|...+-..|++.+|.+++..+... .|..+...- -+..|...+++..|..+++++.....-.+..+..
T Consensus 141 ~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~l---- 216 (445)
T 4b4t_P 141 KDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESL---- 216 (445)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHH----
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHH----
Confidence 35777788889999998888887642 222222211 2556678899999999998876432211111111
Q ss_pred HHhhhhcCCCCCccccchHH-HHHHHHhcCChHHHHHHHHHHHHccCCCCCc---cchHHHHHHHHHHcCCCHHHHHHHH
Q psy767 455 VRHMVKTNQPGVGYSADAAN-HIYHLINKGQIDAAYRIVNTLARSANINGEQ---LPVGGFLVRHMVKTNQPIDKVLAVC 530 (902)
Q Consensus 455 ~~~~~~~~~~~~g~~~~~~~-li~~~~k~g~~~~A~~l~~~m~~~~~~~~~~---~~~~n~li~~~~~~g~~~~~A~~l~ 530 (902)
....+. .+..+...+++.+|.+.|.++........+. ..+...++....-.+. ...--.++
T Consensus 217 --------------k~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~~~d~~~~~~~L~~~v~~~iLa~~-~~~~~~ll 281 (445)
T 4b4t_P 217 --------------KLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAIKSDEAKWKPVLSHIVYFLVLSPY-GNLQNDLI 281 (445)
T ss_dssp --------------HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSSC-SSTTHHHH
T ss_pred --------------HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHhCCC-CchHHHHH
Confidence 001222 3344667889999888887776543211111 0111222222233332 12222333
Q ss_pred HHHHHCCCCCChhhHHHHHHHhcccccccCcchhhHhhhhhc
Q psy767 531 HRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQF 572 (902)
Q Consensus 531 ~~m~~~g~~Pd~~t~~~ll~a~~~~~~~~g~~~~~~~~~~~~ 572 (902)
.........++...|..++.++ ..+.+..|....+.|
T Consensus 282 ~~~~~~~~~~~l~~~~~L~k~f-----~~~~L~~~~~~~~~~ 318 (445)
T 4b4t_P 282 HKIQNDNNLKKLESQESLVKLF-----TTNELMRWPIVQKTY 318 (445)
T ss_dssp HSHHHHSSCHHHHHHHHHHHHH-----HHCCSSSHHHHHHHT
T ss_pred HHHhhcccccccHHHHHHHHHH-----HhchHhhhHHHHHHH
Confidence 3333333346677788888776 445554444444433
No 231
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=81.36 E-value=3.8 Score=44.45 Aligned_cols=117 Identities=13% Similarity=0.149 Sum_probs=83.9
Q ss_pred CCCHHHHHHHHHHHH---HCCCchHHHHHHHHHHHC--C-CCCCH------HHHHHHHH------hHHHHHHHHHcCCHH
Q psy767 80 PLDISHYNALLRVYL---DNEHTFSPTDFLAKLESQ--G-IEPNR------VTYQQLIS------NSKLISKYCQDGNIE 141 (902)
Q Consensus 80 ~pd~~~yn~li~~~~---~~g~~~~A~~l~~~M~~~--g-~~pd~------~t~~~ll~------~~~li~~~~~~g~~~ 141 (902)
.-|+..|..++.... ..|+.+.|...+++.... | +-|+. ..+..-+. ...++..+...|+.+
T Consensus 109 ~~D~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~ 188 (388)
T 2ff4_A 109 TCDLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRAS 188 (388)
T ss_dssp GBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cchHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 346777777776543 468888999988887753 3 11211 11111111 244577778899999
Q ss_pred HHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHH-----CCCCCCHHHH
Q psy767 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ-----AGLEPSAQTY 197 (902)
Q Consensus 142 ~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~-----~g~~pd~~ty 197 (902)
+|...+..+.... |-+...|-.+|.+|.+.|+..+|++.|+...+ .|+.|+..+-
T Consensus 189 ~a~~~l~~~~~~~-P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~ 248 (388)
T 2ff4_A 189 AVIAELEALTFEH-PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLR 248 (388)
T ss_dssp HHHHHHHHHHHHS-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHH
T ss_pred HHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 9999888887665 67888999999999999999999999988754 4999988763
No 232
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=81.04 E-value=10 Score=31.95 Aligned_cols=66 Identities=11% Similarity=0.051 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHHCCCchHHHHHHHHHHHCC------CCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhC
Q psy767 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQG------IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK 153 (902)
Q Consensus 82 d~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g------~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~ 153 (902)
+..-+-.|...+.+.|++..|...|+...+.- -.+....+..+ ..+|.+.|+++.|...++.....
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L------~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYL------SYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHH------HHHHHHccCHHHHHHHHHHHHhc
Confidence 55567788889999999999999998876531 12345566667 88888888888888888887764
No 233
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=80.55 E-value=6.4 Score=41.95 Aligned_cols=65 Identities=8% Similarity=-0.115 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccC
Q psy767 157 ISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223 (902)
Q Consensus 157 p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~ 223 (902)
.+..+|.++...+...|++++|...+++....+ |+...|..+-..+.-.|++++|...++.....
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLE--MSWLNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 344455554444444455555555555555543 45445545555555555555555555555443
No 234
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=80.50 E-value=0.7 Score=48.89 Aligned_cols=30 Identities=20% Similarity=0.369 Sum_probs=27.8
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||.+..+...
T Consensus 264 ~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~ 293 (324)
T 3mtl_A 264 KLLQFEGRNRISAEDAMKHPFFLSLGERIH 293 (324)
T ss_dssp HHSCSSGGGSCCHHHHTTSGGGGGGCSTTS
T ss_pred HHcCcCcccCCCHHHHhcChhhhhcccccc
Confidence 899999999999999999999999887664
No 235
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=80.20 E-value=0.44 Score=49.90 Aligned_cols=27 Identities=19% Similarity=0.370 Sum_probs=23.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+++++++||||.++..
T Consensus 262 ~~L~~dP~~Rps~~eil~h~~~~~~~~ 288 (299)
T 4g31_A 262 DMLSPSPMERPEAINIIENAVFEDLDF 288 (299)
T ss_dssp HHTCSSGGGSCCHHHHHTSGGGCCC--
T ss_pred HHcCCChhHCcCHHHHhcCHhhCCCCC
Confidence 689999999999999999999988744
No 236
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=79.37 E-value=0.47 Score=51.93 Aligned_cols=29 Identities=34% Similarity=0.477 Sum_probs=26.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||..||.+|.+++++|+||||..++.+.
T Consensus 327 ~mL~~dP~~R~ta~e~L~Hp~f~~~~~p~ 355 (398)
T 4b99_A 327 RMLRFEPSARISAAAALRHPFLAKYHDPD 355 (398)
T ss_dssp HHSCSSTTTSCCHHHHTTSGGGTTTCCGG
T ss_pred HHCcCChhHCcCHHHHhcCHhhCcCCCCc
Confidence 89999999999999999999999887543
No 237
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=78.91 E-value=0.74 Score=48.66 Aligned_cols=28 Identities=25% Similarity=0.443 Sum_probs=25.1
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFE 878 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (902)
+||+.||.+|.+++++++||||.++..+
T Consensus 302 ~~L~~dP~~Rpta~e~l~hp~f~~~~~~ 329 (330)
T 3nsz_A 302 KLLRYDHQSRLTAREAMEHPYFYTVVKD 329 (330)
T ss_dssp TTSCSSGGGSCCHHHHHTSGGGTTCC--
T ss_pred HHhcCCcccCCCHHHHhcCccHhhhccC
Confidence 9999999999999999999999987643
No 238
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=78.47 E-value=37 Score=30.33 Aligned_cols=136 Identities=13% Similarity=0.117 Sum_probs=92.4
Q ss_pred HcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHH---HHHHHHHHHHHcCChhH
Q psy767 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ---TYTKLMCGYAKHGDMDS 212 (902)
Q Consensus 136 ~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~---ty~~ll~a~~~~g~~~~ 212 (902)
-.|.+++..++..+..... +..-||-+|--....-+-+-..++++..-.. .|.. -.-.++..|++.+...+
T Consensus 19 ldG~v~qGveii~k~~~ss---ni~E~NW~ICNiiD~a~C~y~v~vLd~IGki---FDis~C~NlKrVi~C~~~~n~~se 92 (172)
T 1wy6_A 19 LDGYIDEGVKIVLEITKSS---TKSEYNWFICNLLESIDCRYMFQVLDKIGSY---FDLDKCQNLKSVVECGVINNTLNE 92 (172)
T ss_dssp HTTCHHHHHHHHHHHHHHS---CHHHHTHHHHHHHHHCCHHHHHHHHHHHGGG---SCGGGCSCTHHHHHHHHHTTCCCH
T ss_pred HhhhHHHHHHHHHHHcCCC---CccccceeeeecchhhchhHHHHHHHHHhhh---cCcHhhhcHHHHHHHHHHhcchHH
Confidence 3577788888887766543 3466777776666666666666666655332 2221 11345556666555442
Q ss_pred HHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhcc
Q psy767 213 IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292 (902)
Q Consensus 213 a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~ 292 (902)
.+...+..+...|+-++-.+++..+.. +-+|+....-.+-.||.+.|+..+|.+++.+.-+
T Consensus 93 ------------------~vd~ALd~lv~~~KkDqLdki~~~~l~-n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 93 ------------------HVNKALDILVIQGKRDKLEEIGREILK-NNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp ------------------HHHHHHHHHHHTTCHHHHHHHHHHHC---CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ------------------HHHHHHHHHHHhccHhHHHHHHHHHhc-cCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 334455666778888888889888654 3478888888999999999999999999999877
Q ss_pred CCCC
Q psy767 293 SLVN 296 (902)
Q Consensus 293 ~~~~ 296 (902)
.|+.
T Consensus 154 kG~k 157 (172)
T 1wy6_A 154 KGEK 157 (172)
T ss_dssp TTCH
T ss_pred hhhH
Confidence 7764
No 239
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=78.26 E-value=10 Score=31.93 Aligned_cols=63 Identities=14% Similarity=0.072 Sum_probs=50.3
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhC------CCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDK------TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~------~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ 195 (902)
-..+.+.|+++.|..-|+...+. .-.+....|..|..+|.+.|+++.|+.++++..+. .|+..
T Consensus 12 G~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l--~P~~~ 80 (104)
T 2v5f_A 12 GKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL--DPEHQ 80 (104)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCH
T ss_pred HHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--CCCCH
Confidence 78888999999999998886542 11345678899999999999999999999999875 56543
No 240
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=77.20 E-value=2.1 Score=45.35 Aligned_cols=28 Identities=25% Similarity=0.418 Sum_probs=24.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFE 878 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (902)
+||+.||.+|.+.+++++||||......
T Consensus 247 ~~L~~dP~~R~t~~eil~h~~~~~~~~~ 274 (328)
T 3fe3_A 247 RFLVLNPIKRGTLEQIMKDRWINAGHEE 274 (328)
T ss_dssp HHCCSSTTTSCCHHHHTTCTTTTTTCTT
T ss_pred HHCCCChhHCcCHHHHhcCHhhcCCCcc
Confidence 6889999999999999999999876543
No 241
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=76.29 E-value=0.68 Score=48.02 Aligned_cols=26 Identities=35% Similarity=0.793 Sum_probs=24.1
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+.+++++||||.++.
T Consensus 265 ~~L~~dP~~R~t~~e~l~hp~f~~~~ 290 (292)
T 3o0g_A 265 NLLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred HHhccChhhCCCHHHHhcCcccccCC
Confidence 89999999999999999999999864
No 242
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=74.44 E-value=1 Score=49.04 Aligned_cols=30 Identities=23% Similarity=0.427 Sum_probs=27.2
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+++++++||||..++...+
T Consensus 311 ~~L~~dP~~R~t~~e~l~Hp~~~~~~~~~~ 340 (388)
T 3oz6_A 311 KLLQFNPNKRISANDALKHPFVSIFHNPNE 340 (388)
T ss_dssp HHCCSSGGGSCCHHHHTTSTTTTTTCCGGG
T ss_pred HhhccCcccCCCHHHHhCCHHHHHhcCCcc
Confidence 899999999999999999999998876544
No 243
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=74.06 E-value=0.84 Score=49.37 Aligned_cols=30 Identities=27% Similarity=0.444 Sum_probs=27.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+++++++||||..++....
T Consensus 306 ~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~ 335 (371)
T 4exu_A 306 KMLELDVDKRLTAAQALTHPFFEPFRDPEE 335 (371)
T ss_dssp HHSCSCTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred HHCCCChhhcCCHHHHhcCcccccCCCccc
Confidence 899999999999999999999998876543
No 244
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=73.66 E-value=57 Score=35.27 Aligned_cols=266 Identities=14% Similarity=0.113 Sum_probs=117.3
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHH--HHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHH--HHHHHHHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGV--FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ--TYTKLMCGYAK 206 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~--yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~--ty~~ll~a~~~ 206 (902)
+...+..|+++-+..+++ .|..|+... ..+.+...+..|+.+-+.-+++ .|..++.. .-.+.+...+.
T Consensus 18 L~~Aa~~g~~~~v~~Ll~----~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~ 89 (437)
T 1n11_A 18 LHVASFMGHLPIVKNLLQ----RGASPNVSNVKVETPLHMAARAGHTEVAKYLLQ----NKAKVNAKAKDDQTPLHCAAR 89 (437)
T ss_dssp HHHHHHHTCHHHHHHHHH----TTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHH----HTCCSSCCCTTSCCHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHH----cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh----CCCCCCCCCCCCCCHHHHHHH
Confidence 666677888876666654 344443221 2234444566777665554443 34333221 11234455566
Q ss_pred cCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCC---HHHHHHHHHHHHHcCCHHHH
Q psy767 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS---AQTYTKLMCGYAKHGDMDSV 283 (902)
Q Consensus 207 ~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd---~~ty~~LI~a~~~~g~~~~A 283 (902)
.|+.+-+.-+++.-..... .+... .+.+...+..|+.+.+..+++ .|..++ ...+ +.+...+..|+.+-+
T Consensus 90 ~g~~~~v~~Ll~~ga~~~~-~~~~g-~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~g~-t~L~~A~~~g~~~~v 162 (437)
T 1n11_A 90 IGHTNMVKLLLENNANPNL-ATTAG-HTPLHIAAREGHVETVLALLE----KEASQACMTKKGF-TPLHVAAKYGKVRVA 162 (437)
T ss_dssp HTCHHHHHHHHHHTCCTTC-CCTTC-CCHHHHHHHHTCHHHHHHHHH----TTCCSCCCCTTSC-CHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHhCCCCCCC-CCCCC-CcHHHHHHHcCCHHHHHHHHh----CCCCCcCCCCCCC-CHHHHHHHcCCHHHH
Confidence 7777766655554221110 11111 112333445677766655554 332221 1111 234445566776655
Q ss_pred HHHHHHhccCCCCCC-----HHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHHH--HHHHHHHH
Q psy767 284 RRLLAQSGSSLVNGD-----YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT--YTKLMCGY 356 (902)
Q Consensus 284 ~~lf~~m~~~~~~p~-----~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t--~~~Li~~y 356 (902)
..+++. +..++ ..+.+...+..++. +.+. .+...|..|+... ..+.+...
T Consensus 163 ~~Ll~~----g~~~~~~~~~g~t~L~~A~~~~~~---~~v~----------------~Ll~~g~~~~~~~~~g~t~L~~A 219 (437)
T 1n11_A 163 ELLLER----DAHPNAAGKNGLTPLHVAVHHNNL---DIVK----------------LLLPRGGSPHSPAWNGYTPLHIA 219 (437)
T ss_dssp HHHHHT----TCCTTCCCSSCCCHHHHHHHTTCH---HHHH----------------HHGGGTCCSCCCCTTCCCHHHHH
T ss_pred HHHHhC----CCCCCCCCCCCCCHHHHHHHcCCH---HHHH----------------HHHhCCCCCCCcCCCCCCHHHHH
Confidence 555443 22211 11222222233322 1111 1344444443221 12234455
Q ss_pred HHcCCHHHHHHHHHHcCCCCCccc--HHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHHHHHHHHHcCCHHHHHHHH
Q psy767 357 AKHGDMDSIRRLLAQNGSSLVNGD--YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIV 434 (902)
Q Consensus 357 ~~~g~~~~A~~~~~~m~~~~~~~~--~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t~i~~l~~~g~~~~A~~~~ 434 (902)
+..|+.+-+..+++.- ......+ -.+.+...+..|+.+.+.-+++.-....-...+..|.+...+..|..+-+..++
T Consensus 220 ~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 298 (437)
T 1n11_A 220 AKQNQVEVARSLLQYG-GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLI 298 (437)
T ss_dssp HHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 6677877777666542 1111111 112334445667666555444432110001111224455556677766555444
Q ss_pred H
Q psy767 435 N 435 (902)
Q Consensus 435 ~ 435 (902)
+
T Consensus 299 ~ 299 (437)
T 1n11_A 299 K 299 (437)
T ss_dssp H
T ss_pred h
Confidence 3
No 245
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=73.61 E-value=43 Score=41.82 Aligned_cols=163 Identities=7% Similarity=0.014 Sum_probs=92.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCccc
Q psy767 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314 (902)
Q Consensus 235 ~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~ 314 (902)
++..+...+..+.+.++.... +.+...--.+-.+|...|++++|.+.|.+.... +.... .....
T Consensus 818 l~~~l~~~~~~~~~~~l~~~~-----~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~-~~~~~----------~l~~~ 881 (1139)
T 4fhn_B 818 LVEKLFLFKQYNACMQLIGWL-----NSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLV-LYSHT----------SQFAV 881 (1139)
T ss_dssp HHHHHHHHSCTTHHHHHHHHS-----CCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCS-CTTCC----------CSCSS
T ss_pred HHHHHHHhhhHHHHHHHhhhc-----cCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhh-hcccc----------hhhhh
Confidence 344455567777666654432 344444445567889999999999999874321 11000 00000
Q ss_pred HHHHHHHHHHhhhhhcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH-cCCC-CCcc-----cHHHHHHH
Q psy767 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ-NGSS-LVNG-----DYLDIIHA 387 (902)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~-m~~~-~~~~-----~~~~li~~ 387 (902)
......+. -.......-..-|..++..+.+.|.++.+.++-+. +... ...+ -|..+...
T Consensus 882 ~~~~~~~~--------------~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~ 947 (1139)
T 4fhn_B 882 LREFQEIA--------------EKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKT 947 (1139)
T ss_dssp HHHHHHHH--------------HTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHH
T ss_pred hccccccc--------------ccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHH
Confidence 00100000 00011112234577788888888888887766543 1111 1111 17778888
Q ss_pred HHHcCChHHHHHHHHHcccCCCCCCCHHH-HHHHHHHcCCHH
Q psy767 388 LAVSGHGEYIDEIISKIQPGVGYSADAAN-HIYHLINKGQID 428 (902)
Q Consensus 388 ~~~~g~~~~A~~l~~~m~~~~g~~pd~~t-~i~~l~~~g~~~ 428 (902)
+...|++++|...+-.+.. ...+-+... ++..+|..|..+
T Consensus 948 ~L~l~~ye~Ay~aL~~~pd-~~~r~~cLr~LV~~lce~~~~~ 988 (1139)
T 4fhn_B 948 ACAAGKFDAAHVALMVLST-TPLKKSCLLDFVNQLTKQGKIN 988 (1139)
T ss_dssp HHHHCCSGGGGHHHHHHHH-SSSCHHHHHHHHHHHHHHCCHH
T ss_pred HHhhCCHHHHHHHHHhCCC-HHHHHHHHHHHHHHHHhCCChh
Confidence 8999999999988888766 445555543 667777776655
No 246
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=73.21 E-value=0.92 Score=48.42 Aligned_cols=26 Identities=35% Similarity=0.614 Sum_probs=23.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||..||.+|.+++++++||||....
T Consensus 306 ~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 306 RLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHcCCChhHCcCHHHHhcCHhhcCCC
Confidence 78999999999999999999997543
No 247
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=73.01 E-value=0.94 Score=50.60 Aligned_cols=29 Identities=28% Similarity=0.485 Sum_probs=26.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||..||.+|.+++++++||||.+++...
T Consensus 379 ~mL~~dP~~R~t~~e~L~Hp~f~~~~~~~ 407 (458)
T 3rp9_A 379 RMLVFNPNKRITINECLAHPFFKEVRIAE 407 (458)
T ss_dssp HHSCSSTTTSCCHHHHHHSGGGTTTCCGG
T ss_pred HHhccCccccCCHHHHhcCHhhhhcCCCc
Confidence 89999999999999999999999987654
No 248
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=72.68 E-value=1.1 Score=47.56 Aligned_cols=27 Identities=41% Similarity=0.757 Sum_probs=24.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+++++++||||.+...
T Consensus 301 ~~L~~dP~~R~t~~e~l~hp~f~~~~~ 327 (329)
T 3gbz_A 301 AMLEMDPVKRISAKNALEHPYFSHNDF 327 (329)
T ss_dssp HHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred HHccCChhhCCCHHHHhCCcccCCCCC
Confidence 789999999999999999999988654
No 249
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=72.49 E-value=0.97 Score=48.44 Aligned_cols=30 Identities=27% Similarity=0.278 Sum_probs=27.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+++++++||||.++.....
T Consensus 297 ~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~ 326 (360)
T 3e3p_A 297 ALLQYLPEERMKPYEALCHPYFDELHDPAT 326 (360)
T ss_dssp HHTCSSGGGSCCHHHHTTSGGGGGGGCTTC
T ss_pred HHhccCccccCCHHHHhcCccccccCCccc
Confidence 899999999999999999999999876654
No 250
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=72.36 E-value=1.1e+02 Score=32.90 Aligned_cols=73 Identities=14% Similarity=0.099 Sum_probs=34.5
Q ss_pred HHHHHHHhcCCCCcc---chHHHHHHHHHhcCHHHHHHHHHHhhhhhchhhccchhhhhhhccCCchhHHHHHHHHH
Q psy767 660 EVFSQLRSVGVTIGS---ITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTVVRAVC 733 (902)
Q Consensus 660 ~~~~~l~~~g~~~~~---~~~~~l~~~~~~g~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 733 (902)
++++.+-+.|..++. .-...+..+++.|+.+-+.-+++ .....+...-...-...++....+.+.+++++.+.
T Consensus 325 ~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~-~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~ 400 (437)
T 1n11_A 325 KLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK-NGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT 400 (437)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHH-CcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcc
Confidence 466677777766654 22234455567777665555544 33322211111111122333444455566665553
No 251
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=72.33 E-value=1.1 Score=48.78 Aligned_cols=29 Identities=28% Similarity=0.433 Sum_probs=26.8
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+++++++||||+.++...
T Consensus 304 ~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 332 (394)
T 4e7w_A 304 RLLEYTPSARLTAIEALCHPFFDELRTGE 332 (394)
T ss_dssp HHCCSSGGGSCCHHHHHTSGGGSTTTSSC
T ss_pred HHhCCChhhCCCHHHHhcChhhhhhcccc
Confidence 89999999999999999999999887654
No 252
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=72.13 E-value=1.1 Score=46.43 Aligned_cols=30 Identities=37% Similarity=0.597 Sum_probs=27.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||.+++...|
T Consensus 266 ~~L~~dP~~Rpt~~~~l~hp~~~~~~~~~~ 295 (299)
T 2r3i_A 266 QMLHYDPNKRISAKAALAHPFFQDVTKPVP 295 (299)
T ss_dssp HHTCSSTTTSCCHHHHHTSGGGTTCCCCCC
T ss_pred HhcCcCcccCCCHHHHhcChhhhcCCCCCC
Confidence 899999999999999999999999887765
No 253
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=72.05 E-value=1.1 Score=49.63 Aligned_cols=30 Identities=30% Similarity=0.424 Sum_probs=27.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||.+++....
T Consensus 344 ~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~ 373 (432)
T 3n9x_A 344 SMLKFNPNKRITIDQALDHPYLKDVRKKKL 373 (432)
T ss_dssp HHSCSSTTTSCCHHHHHTCGGGTTTCCTTT
T ss_pred HHhcCCcccCCCHHHHhcChhhhhccCccc
Confidence 899999999999999999999999876653
No 254
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=72.00 E-value=14 Score=37.94 Aligned_cols=109 Identities=16% Similarity=0.049 Sum_probs=75.1
Q ss_pred HHHHHHHH-HHHhC--CC------HHHHHHHHHHHHHCCCCCC---HHHHHHHHHHHHHc-----CChhHHHHHHHhccc
Q psy767 160 GVFNALIY-GHSQA--ND------MASAEGILTMMSQAGLEPS---AQTYTKLMCGYAKH-----GDMDSIKTKIPSLKP 222 (902)
Q Consensus 160 ~~yn~Li~-~~~~~--g~------~~~A~~l~~~M~~~g~~pd---~~ty~~ll~a~~~~-----g~~~~a~~l~~~~~~ 222 (902)
-.|..++. .++.. |. ...|..++++..+. .|+ ...|..+...|... |+.++|.+.|++...
T Consensus 155 L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleL--DP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~ 232 (301)
T 3u64_A 155 LYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDL--WPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTR 232 (301)
T ss_dssp HHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHH--CTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHh--CCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHH
Confidence 45666664 33432 33 46777777777775 566 56888888888884 899999988888887
Q ss_pred CCCccchhhHHHHHHHHHh-cCCHHHHHHHHHHHHHCCCC--CCHHHHHHH
Q psy767 223 QSELFLCFSFQLTNLLILV-SSDMASAEGILTMMSQAGLE--PSAQTYTKL 270 (902)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~-~g~~~~A~~l~~~m~~~g~~--pd~~ty~~L 270 (902)
.+...+......+...++. .|+.+.+.+.+++....... |+....|.+
T Consensus 233 LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P~~~lan~~ 283 (301)
T 3u64_A 233 YCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPHNKLLVIL 283 (301)
T ss_dssp HCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCSSCHHHHHH
T ss_pred hCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCCChhHHHHH
Confidence 6665555566666776766 47888888888888776655 665444443
No 255
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=71.95 E-value=26 Score=35.01 Aligned_cols=87 Identities=17% Similarity=0.215 Sum_probs=44.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHH--HHHHHHHHH
Q psy767 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT--YTKLMCGYA 205 (902)
Q Consensus 128 ~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t--y~~ll~a~~ 205 (902)
++.+...++.|+++.+..+++.-...+...+..-++ .+...+..|+.+ +++.+.+.|..|+... -.+.+...+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t-~L~~A~~~g~~~----~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 80 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWT-PLHNAVQMSRED----IVELLLRHGADPVLRKKNGATPFLLAA 80 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCC-HHHHHHHTTCHH----HHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCc-HHHHHHHcCCHH----HHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 344777788999877766665422222111222233 444455667764 4444555665554321 113344455
Q ss_pred HcCChhHHHHHHHh
Q psy767 206 KHGDMDSIKTKIPS 219 (902)
Q Consensus 206 ~~g~~~~a~~l~~~ 219 (902)
..|+.+-+..+++.
T Consensus 81 ~~~~~~~v~~Ll~~ 94 (285)
T 1wdy_A 81 IAGSVKLLKLFLSK 94 (285)
T ss_dssp HHTCHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHc
Confidence 66776655555543
No 256
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=71.69 E-value=1.1 Score=47.09 Aligned_cols=27 Identities=33% Similarity=0.491 Sum_probs=25.0
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||.++..
T Consensus 283 ~~L~~dP~~Rpt~~ell~hp~f~~~~~ 309 (311)
T 3niz_A 283 NMLCFDPNKRISARDAMNHPYFKDLDP 309 (311)
T ss_dssp HHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred HHcCCChhHCCCHHHHhcCcccccCCc
Confidence 799999999999999999999998753
No 257
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=70.86 E-value=1.1 Score=48.32 Aligned_cols=29 Identities=31% Similarity=0.364 Sum_probs=26.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||..||.+|.+++++++||||..++...
T Consensus 294 ~mL~~dP~~R~t~~e~L~hp~~~~~~~~~ 322 (367)
T 2fst_X 294 KMLVLDSDKRITAAQALAHAYFAQYHDPD 322 (367)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGTTTCCGG
T ss_pred HhCCCCcccCcCHHHHhcChhhhhccCCC
Confidence 89999999999999999999999887654
No 258
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=70.54 E-value=0.99 Score=47.71 Aligned_cols=27 Identities=30% Similarity=0.594 Sum_probs=25.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||+.++.
T Consensus 311 ~~L~~dP~~Rpt~~ell~hp~f~~~~~ 337 (339)
T 1z57_A 311 KMLEYDPAKRITLREALKHPFFDLLKK 337 (339)
T ss_dssp HHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred HHhCcCcccccCHHHHhcCHHHHHHhc
Confidence 899999999999999999999998775
No 259
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=70.39 E-value=1.1 Score=47.17 Aligned_cols=30 Identities=37% Similarity=0.641 Sum_probs=25.4
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+++++++||||..+.....
T Consensus 276 ~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~ 305 (317)
T 2pmi_A 276 GLLQLNPDMRLSAKQALHHPWFAEYYHHAS 305 (317)
T ss_dssp HHSCSSGGGSCCHHHHTTSGGGGGGCC---
T ss_pred HHCCCCcccCCCHHHHhCChhhhcccchhh
Confidence 899999999999999999999988766543
No 260
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=70.39 E-value=1 Score=46.71 Aligned_cols=23 Identities=30% Similarity=0.742 Sum_probs=21.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCcc
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFN 873 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~ 873 (902)
+||..||.+|.+++++++||||.
T Consensus 265 ~~L~~dP~~R~s~~e~l~Hp~~~ 287 (290)
T 3fpq_A 265 GCIRQNKDERYSIKDLLNHAFFQ 287 (290)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGC
T ss_pred HHccCChhHCcCHHHHhcCcccc
Confidence 79999999999999999999994
No 261
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=70.27 E-value=1.1 Score=48.46 Aligned_cols=29 Identities=28% Similarity=0.387 Sum_probs=25.2
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||..||.+|.+++++++||||.+++...
T Consensus 290 ~mL~~dP~~R~t~~e~l~hp~f~~~~~~~ 318 (367)
T 1cm8_A 290 KMLVLDAEQRVTAGEALAHPYFESLHDTE 318 (367)
T ss_dssp HHSCSSTTTSCCHHHHHHSGGGTTTC---
T ss_pred HHccCChhHCCCHHHHhcChHHHhhcCCc
Confidence 89999999999999999999999987654
No 262
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=69.52 E-value=0.7 Score=49.35 Aligned_cols=27 Identities=37% Similarity=0.630 Sum_probs=25.0
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||.++..
T Consensus 316 ~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 342 (355)
T 2eu9_A 316 RMLEFDPAQRITLAEALLHPFFAGLTP 342 (355)
T ss_dssp HHTCSSTTTSCCHHHHTTSGGGGGCCH
T ss_pred HHhcCChhhCcCHHHHhcChhhcCCCh
Confidence 899999999999999999999998653
No 263
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=68.89 E-value=16 Score=30.66 Aligned_cols=63 Identities=17% Similarity=0.210 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q psy767 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202 (902)
Q Consensus 139 ~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~ 202 (902)
|.=+..+-++.+...++.|+.....+.+++|-|.+++..|.++|+-.+..- .+...+|..++.
T Consensus 25 D~~e~rrglN~l~~~DlVP~P~ii~aaLrAcRRvND~alAVR~lE~iK~K~-~~~~~iY~~~lq 87 (109)
T 1v54_E 25 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKA-GPHKEIYPYVIQ 87 (109)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-TTCTTHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCchhhHHHHHH
Confidence 444667777777888888899999999999999999999999888876542 233445666654
No 264
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=68.50 E-value=1.3 Score=47.28 Aligned_cols=30 Identities=27% Similarity=0.444 Sum_probs=27.2
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+++++++||||..++....
T Consensus 288 ~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~~ 317 (353)
T 3coi_A 288 KMLELDVDKRLTAAQALTHPFFEPFRDPEE 317 (353)
T ss_dssp HHSCSCTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred HHcCCCcccCCCHHHHhcCcchhhccCccc
Confidence 899999999999999999999998876543
No 265
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=68.14 E-value=1.4 Score=47.30 Aligned_cols=30 Identities=40% Similarity=0.739 Sum_probs=27.6
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||.++....+
T Consensus 299 ~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~ 328 (362)
T 3pg1_A 299 KMLEFNPQRRISTEQALRHPYFESLFDPLD 328 (362)
T ss_dssp HHTCSSGGGSCCHHHHHTSGGGTTTCCGGG
T ss_pred HHhcCChhhCCCHHHHHcCchhhhccCccc
Confidence 899999999999999999999999876655
No 266
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=67.79 E-value=1.3 Score=48.13 Aligned_cols=26 Identities=35% Similarity=0.441 Sum_probs=23.2
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+.+++++||||....
T Consensus 355 ~mL~~dP~~Rpta~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 355 RMLDYDPKTRIQPYYALQHSFFKKTA 380 (382)
T ss_dssp HHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred HhcCCChhhCCCHHHHhcCcccccCC
Confidence 89999999999999999999997654
No 267
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=67.27 E-value=1.6 Score=47.27 Aligned_cols=24 Identities=33% Similarity=0.585 Sum_probs=22.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||+.||.+|.+++++++||||.+
T Consensus 374 ~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 374 PMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp GGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred HHhccChhhcCCHHHHhhCccccC
Confidence 899999999999999999999974
No 268
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=67.21 E-value=21 Score=41.98 Aligned_cols=126 Identities=10% Similarity=0.025 Sum_probs=76.4
Q ss_pred HHHHHHHHhCCC-HHHHHHHHHHHHHCCCCCCHHHHH--HHHHHHHHcCChh-HHHHHHHhccc-------CCCccch--
Q psy767 163 NALIYGHSQAND-MASAEGILTMMSQAGLEPSAQTYT--KLMCGYAKHGDMD-SIKTKIPSLKP-------QSELFLC-- 229 (902)
Q Consensus 163 n~Li~~~~~~g~-~~~A~~l~~~M~~~g~~pd~~ty~--~ll~a~~~~g~~~-~a~~l~~~~~~-------~~~~~~~-- 229 (902)
.+|+..+...|+ .+.|.++|+++... .|...++. .++..+...++-+ +|.+++.+..+ .-...+.
T Consensus 252 ~~Ll~~~~~t~~~~~~a~~~le~L~~~--~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~ 329 (754)
T 4gns_B 252 YSLKSFIAITPSLVDFTIDYLKGLTKK--DPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADS 329 (754)
T ss_dssp HHHHHHHHTCGGGHHHHHHHHHHHHHH--CGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHH
T ss_pred HHHHHHHcccccHHHHHHHHHHHHHhh--CCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhccccccc
Confidence 445555555666 57799999998876 34333322 2333333333211 34444433321 0000000
Q ss_pred --------hhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhc
Q psy767 230 --------FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291 (902)
Q Consensus 230 --------~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~ 291 (902)
.....-..++...|+++.|+.+-++....- +-+..+|-.|...|...|+++.|+-.++.+.
T Consensus 330 ~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~a-PseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 330 ARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTELA-LDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred ccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcC-chhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 011122233345799999999999988763 5568899999999999999999999999864
No 269
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=67.13 E-value=1.5 Score=48.58 Aligned_cols=30 Identities=37% Similarity=0.646 Sum_probs=22.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||.......+
T Consensus 391 ~~L~~dP~~Rpta~e~L~Hpw~~~~~~~~~ 420 (429)
T 3kvw_A 391 QCLEWDPAVRMTPGQALRHPWLRRRLPKPP 420 (429)
T ss_dssp HHTCSSTTTSCCHHHHHTSTTTC-------
T ss_pred HHCCCChhhCCCHHHHhCChhhccCCCCCC
Confidence 899999999999999999999987654444
No 270
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=66.25 E-value=30 Score=31.52 Aligned_cols=109 Identities=9% Similarity=0.062 Sum_probs=76.0
Q ss_pred CCHHHHHHHHHHHHHCCCc------hHHHHHHHHHHHCCCCCCHH----HHHHHHHhHHHHHHHHHcCCHHHHHHHHHHh
Q psy767 81 LDISHYNALLRVYLDNEHT------FSPTDFLAKLESQGIEPNRV----TYQQLISNSKLISKYCQDGNIEGATKILEFM 150 (902)
Q Consensus 81 pd~~~yn~li~~~~~~g~~------~~A~~l~~~M~~~g~~pd~~----t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m 150 (902)
-|..+|=..+.-.-+.|++ +..+++|++... .++|+.. .|..+.-.-++. ...+++++|.++|+.+
T Consensus 11 ~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia-~~Pp~k~~~wrrYI~LWIrYA~~---~ei~D~d~aR~vy~~a 86 (161)
T 4h7y_A 11 NNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIE-ALPPDKYGQNESFARIQVRFAEL---KAIQEPDDARDYFQMA 86 (161)
T ss_dssp CSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHH-HSCGGGGTTCHHHHHHHHHHHHH---HHHHCGGGCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHH-cCCccccccHHHHHHHHHHHHHH---HHhcCHHHHHHHHHHH
Confidence 4778888888888888999 888889988776 3556421 122220001111 2348999999999998
Q ss_pred hhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCH
Q psy767 151 RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194 (902)
Q Consensus 151 ~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~ 194 (902)
.... +-=...|.....-=.+.|++..|.+++......+..|..
T Consensus 87 ~~~h-KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~ 129 (161)
T 4h7y_A 87 RANC-KKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLE 129 (161)
T ss_dssp HHHC-TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHH
T ss_pred HHHh-HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHH
Confidence 6542 222667777777778899999999999999988766543
No 271
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=66.23 E-value=1.8 Score=47.47 Aligned_cols=26 Identities=35% Similarity=0.614 Sum_probs=23.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||..||.+|.+++++++||||....
T Consensus 383 ~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 383 RLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp HHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHcCCChhHCcCHHHHhcCHHhcCCC
Confidence 79999999999999999999997643
No 272
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=65.85 E-value=1.5 Score=47.64 Aligned_cols=29 Identities=31% Similarity=0.573 Sum_probs=24.8
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+++++++||||..++...
T Consensus 316 ~~L~~dP~~Rpta~ell~hp~f~~~~~~~ 344 (389)
T 3gni_B 316 QCLQRNPDARPSASTLLNHSFFKQIKRRA 344 (389)
T ss_dssp HHTCSCTTTSCCHHHHTTSGGGGGC---C
T ss_pred HHhhcCcccCCCHHHHhcCHHHHHHhhcc
Confidence 89999999999999999999999887654
No 273
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=64.84 E-value=1.7 Score=46.62 Aligned_cols=29 Identities=34% Similarity=0.652 Sum_probs=26.2
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||..+....
T Consensus 296 ~~L~~dP~~R~t~~e~l~hp~~~~~~~~~ 324 (364)
T 3qyz_A 296 KMLTFNPHKRIEVEQALAHPYLEQYYDPS 324 (364)
T ss_dssp HHTCSSTTTSCCHHHHHTSGGGTTTCCGG
T ss_pred HHcCCChhhCCCHHHHhcCcchhhccCcc
Confidence 89999999999999999999999875543
No 274
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=64.60 E-value=2.1 Score=45.51 Aligned_cols=30 Identities=33% Similarity=0.516 Sum_probs=27.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||.+++....
T Consensus 288 ~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~ 317 (353)
T 2b9h_A 288 RMLVFDPAKRITAKEALEHPYLQTYHDPND 317 (353)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGTTTCCTTS
T ss_pred HhcCcCcccCCCHHHHhcCccccccCCccc
Confidence 899999999999999999999998876553
No 275
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=64.35 E-value=32 Score=40.45 Aligned_cols=127 Identities=15% Similarity=0.101 Sum_probs=78.3
Q ss_pred HHHHHHHHHCCC-chHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCC-HHHHHHHHHHhhh------CCCCCC
Q psy767 87 NALLRVYLDNEH-TFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN-IEGATKILEFMRD------KTFPIS 158 (902)
Q Consensus 87 n~li~~~~~~g~-~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~-~~~A~~l~~~m~~------~~~~p~ 158 (902)
.++++.+...++ ++.|..+|+++.... |...++-.. ++|..+.+.++ --+|.+++.+..+ ...++.
T Consensus 252 ~~Ll~~~~~t~~~~~~a~~~le~L~~~~--p~~~~~~~~----~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~ 325 (754)
T 4gns_B 252 YSLKSFIAITPSLVDFTIDYLKGLTKKD--PIHDIYYKT----AMITILDHIETKELDMITILNETLDPLLSLLNDLPPR 325 (754)
T ss_dssp HHHHHHHHTCGGGHHHHHHHHHHHHHHC--GGGHHHHHH----HHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHcccccHHHHHHHHHHHHHhhC--CchhHHHHH----HHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhccc
Confidence 455555555666 577999999998763 332222111 11444433332 2234444433321 112221
Q ss_pred HH-----------HHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHHHHHcCChhHHHHHHHhcc
Q psy767 159 EG-----------VFNALIYGHSQANDMASAEGILTMMSQAGLEPS-AQTYTKLMCGYAKHGDMDSIKTKIPSLK 221 (902)
Q Consensus 159 ~~-----------~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd-~~ty~~ll~a~~~~g~~~~a~~l~~~~~ 221 (902)
.. ..+.=..-|...|+++.|+++-++.... .|+ -.||..|..+|...|+++.|+-.+..+.
T Consensus 326 ~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~--aPseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 326 DADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTEL--ALDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred ccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhc--CchhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 11 1111124456689999999999999886 566 5699999999999999999999988885
No 276
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=64.35 E-value=2.8 Score=44.90 Aligned_cols=30 Identities=23% Similarity=0.337 Sum_probs=26.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||.+.....+
T Consensus 316 ~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~ 345 (373)
T 1q8y_A 316 PMLQLDPRKRADAGGLVNHPWLKDTLGMEE 345 (373)
T ss_dssp GGGCSSTTTCBCHHHHHTCGGGTTCTTCTT
T ss_pred HHhccCccccCCHHHHhhChhhhcccCccc
Confidence 899999999999999999999988665443
No 277
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=64.01 E-value=1 Score=47.92 Aligned_cols=29 Identities=24% Similarity=0.418 Sum_probs=25.8
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||.+.....
T Consensus 305 ~~L~~dP~~Rps~~e~l~hp~f~~~~~~~ 333 (348)
T 2pml_X 305 LFLRKNPAERITSEDALKHEWLADTNIED 333 (348)
T ss_dssp HHCCSSGGGSCCHHHHHTSGGGTTCCHHH
T ss_pred HHccCChhhCCCHHHHhcCccccCCCHHH
Confidence 89999999999999999999998765443
No 278
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=63.98 E-value=34 Score=35.01 Aligned_cols=112 Identities=13% Similarity=0.080 Sum_probs=79.1
Q ss_pred CCHHHHHHHHHH-HHHC--CC------chHHHHHHHHHHHCCCCCC---HHHHHHHHHhHHHHHHHHHc-----CCHHHH
Q psy767 81 LDISHYNALLRV-YLDN--EH------TFSPTDFLAKLESQGIEPN---RVTYQQLISNSKLISKYCQD-----GNIEGA 143 (902)
Q Consensus 81 pd~~~yn~li~~-~~~~--g~------~~~A~~l~~~M~~~g~~pd---~~t~~~ll~~~~li~~~~~~-----g~~~~A 143 (902)
+....|..++.+ ++.. |. ...|...+++..+ +.|+ ...|..+ ...|.+. |+.++|
T Consensus 152 ve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAle--LDP~~~~GsA~~~L------G~lY~~vPp~~gGd~ekA 223 (301)
T 3u64_A 152 VGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACD--LWPSYQEGAVWNVL------TKFYAAAPESFGGGMEKA 223 (301)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHH--HCTTHHHHHHHHHH------HHHHHHSCTTTTCCHHHH
T ss_pred cHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHH--hCCCcccCHHHHHH------HHHHHhCCCccCCCHHHH
Confidence 345668777665 4443 33 2445555666554 4565 4567777 8888884 999999
Q ss_pred HHHHHHhhhCCCCCCHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHCCCC--CCHHHHHHH
Q psy767 144 TKILEFMRDKTFPISEGVFNALIYGHSQA-NDMASAEGILTMMSQAGLE--PSAQTYTKL 200 (902)
Q Consensus 144 ~~l~~~m~~~~~~p~~~~yn~Li~~~~~~-g~~~~A~~l~~~M~~~g~~--pd~~ty~~l 200 (902)
.+.|++..+.+-.-+..++......+++. |+.++|.+.+++....... |+....+.+
T Consensus 224 ~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P~~~lan~~ 283 (301)
T 3u64_A 224 HTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPHNKLLVIL 283 (301)
T ss_dssp HHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCSSCHHHHHH
T ss_pred HHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCCChhHHHHH
Confidence 99999988754111367888888888885 9999999999999998766 765544443
No 279
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=63.66 E-value=2.2 Score=46.54 Aligned_cols=27 Identities=30% Similarity=0.614 Sum_probs=24.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||..||.+|.+++++++||||..-..
T Consensus 316 ~~L~~dP~~R~ta~e~L~hp~f~~~~~ 342 (405)
T 3rgf_A 316 KLLTMDPIKRITSEQAMQDPYFLEDPL 342 (405)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred HHccCCcccCCCHHHHhcChhhccCCC
Confidence 899999999999999999999976543
No 280
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=63.54 E-value=1.1 Score=48.54 Aligned_cols=29 Identities=21% Similarity=0.316 Sum_probs=26.0
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+++++++||||+.++...
T Consensus 304 ~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 332 (383)
T 3eb0_A 304 QILRYEPDLRINPYEAMAHPFFDHLRNSY 332 (383)
T ss_dssp HHCCSSGGGSCCHHHHHTSGGGHHHHHC-
T ss_pred HHccCChhhCCCHHHHhcCHHHHHHHhhc
Confidence 99999999999999999999999876543
No 281
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=63.00 E-value=2 Score=47.29 Aligned_cols=29 Identities=21% Similarity=0.245 Sum_probs=26.4
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||..||.+|.+.+++++||||+.++...
T Consensus 319 ~~L~~dP~~R~t~~e~l~hp~f~~~~~~~ 347 (420)
T 1j1b_A 319 RLLEYTPTARLTPLEACAHSFFDELRDPN 347 (420)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGGGGGCTT
T ss_pred HhccCChhHCCCHHHHhCCHhhccccccc
Confidence 89999999999999999999999887543
No 282
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=62.74 E-value=33 Score=30.20 Aligned_cols=57 Identities=12% Similarity=0.012 Sum_probs=27.4
Q ss_pred HHHHHHcCCHHH---HHHHHHHhhhCCCCC-CHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHC
Q psy767 131 ISKYCQDGNIEG---ATKILEFMRDKTFPI-SEGV-FNALIYGHSQANDMASAEGILTMMSQA 188 (902)
Q Consensus 131 i~~~~~~g~~~~---A~~l~~~m~~~~~~p-~~~~-yn~Li~~~~~~g~~~~A~~l~~~M~~~ 188 (902)
..++.+..+... +..+++.....+ .| ...- .-.|--+|.+.|++++|.+.++.+.+.
T Consensus 42 Aw~Lv~S~~~~d~~~GI~lLe~l~~~~-~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 42 AWCLVRTRYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp HHHHTTSSSHHHHHHHHHHHHHHTTTS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 444455444433 555555555443 12 1111 222334555666666666666665554
No 283
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=62.60 E-value=1.8 Score=45.49 Aligned_cols=25 Identities=16% Similarity=0.352 Sum_probs=23.2
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+.+++++||||.++
T Consensus 308 ~~l~~~p~~Rps~~~~l~~~~f~~~ 332 (332)
T 3qd2_B 308 DMLSPSPTERPEATDIIENAIFENL 332 (332)
T ss_dssp HHHCSSGGGSCCHHHHHHSTTCCCC
T ss_pred HHccCCCCcCCCHHHHhhchhhhcC
Confidence 6889999999999999999999875
No 284
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=62.39 E-value=1.2e+02 Score=29.75 Aligned_cols=41 Identities=10% Similarity=0.077 Sum_probs=21.6
Q ss_pred HHHHHHHhcCCCCcc---chHHHHHHHHHhcCHHHHHHHHHHhh
Q psy767 660 EVFSQLRSVGVTIGS---ITSAYVVHMLRQHNLKEAALLAKSFR 700 (902)
Q Consensus 660 ~~~~~l~~~g~~~~~---~~~~~l~~~~~~g~~~~a~~~~~~~~ 700 (902)
++++.+-+.|..++. .-...+..+++.|+.+-+.-+++...
T Consensus 200 ~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g 243 (285)
T 1wdy_A 200 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH 243 (285)
T ss_dssp HHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSS
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccC
Confidence 445555555544433 12233445567777777666666443
No 285
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=62.34 E-value=2.4 Score=44.73 Aligned_cols=29 Identities=28% Similarity=0.449 Sum_probs=25.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||.++..+.
T Consensus 270 ~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~ 298 (327)
T 3lm5_A 270 SLLVKNPEKRPTAEICLSHSWLQQWDFEN 298 (327)
T ss_dssp HHSCSSGGGSCCHHHHTTCGGGCCCCTTC
T ss_pred HHcCCChhhCcCHHHHhCCHhhccccccc
Confidence 89999999999999999999998775543
No 286
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=62.03 E-value=1.9 Score=44.45 Aligned_cols=24 Identities=38% Similarity=0.659 Sum_probs=22.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||+.||.+|.+++++++||||.+
T Consensus 263 ~~L~~dP~~Rpt~~e~l~hp~f~~ 286 (288)
T 1ob3_A 263 KMLKLDPNQRITAKQALEHAYFKE 286 (288)
T ss_dssp HHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred HHcCCCcccCCCHHHHhcCcchhh
Confidence 899999999999999999999975
No 287
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=62.02 E-value=2 Score=44.76 Aligned_cols=29 Identities=31% Similarity=0.668 Sum_probs=25.6
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||..+..+.
T Consensus 288 ~~L~~dP~~Rpt~~ell~hp~~~~~~~p~ 316 (320)
T 2i6l_A 288 QILTFSPMDRLTAEEALSHPYMSIYSFPM 316 (320)
T ss_dssp TTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred HHcCCCccccCCHHHHhCCcccccccCcc
Confidence 99999999999999999999999876654
No 288
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=61.65 E-value=1.9e+02 Score=31.56 Aligned_cols=153 Identities=16% Similarity=0.114 Sum_probs=93.6
Q ss_pred CCHHHHHHHHHHhhh-----CCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHC-CCCCCHHHH--HHHHHHHHHcCC
Q psy767 138 GNIEGATKILEFMRD-----KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA-GLEPSAQTY--TKLMCGYAKHGD 209 (902)
Q Consensus 138 g~~~~A~~l~~~m~~-----~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~-g~~pd~~ty--~~ll~a~~~~g~ 209 (902)
|+++.|.+.+-.+.+ .+..-+......++..|...|+++...+.+..+... |..+...+. ..++........
T Consensus 30 ~~~~~a~e~ll~lEK~~r~~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Lskkr~qlk~ai~~~V~~~~~~l~~~~~ 109 (445)
T 4b4t_P 30 NDCNSALDQLLVLEKKTRQASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSKKHGQLKLSIQYMIQKVMEYLKSSKS 109 (445)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTTTTSHHHHHHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc
Confidence 667777776655542 345556777889999999999999998888776543 433333321 222333333343
Q ss_pred hhH--HHHHHHhccc--CCCcc----chhhHHHHHHHHHhcCCHHHHHHHHHHHHH--CCCCCC---HHHHHHHHHHHHH
Q psy767 210 MDS--IKTKIPSLKP--QSELF----LCFSFQLTNLLILVSSDMASAEGILTMMSQ--AGLEPS---AQTYTKLMCGYAK 276 (902)
Q Consensus 210 ~~~--a~~l~~~~~~--~~~~~----~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~--~g~~pd---~~ty~~LI~a~~~ 276 (902)
.+. -..+.+.... .+... .......+..++...|++.+|..++..+.. .|.... ...|...+..|..
T Consensus 110 ~d~~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~ 189 (445)
T 4b4t_P 110 LDLNTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSIL 189 (445)
T ss_dssp THHHHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 332 2233333322 11111 122335566777778999999999998864 232222 3466777888889
Q ss_pred cCCHHHHHHHHHHh
Q psy767 277 HGDMDSVRRLLAQS 290 (902)
Q Consensus 277 ~g~~~~A~~lf~~m 290 (902)
.+++..|..++...
T Consensus 190 ~~d~~~a~~~~~ki 203 (445)
T 4b4t_P 190 KGDYSQATVLSRKI 203 (445)
T ss_dssp HTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999998888763
No 289
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=61.46 E-value=2.2 Score=45.47 Aligned_cols=30 Identities=23% Similarity=0.270 Sum_probs=26.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+++++++||||.+.....+
T Consensus 274 ~~L~~dP~~Rpt~~ell~h~~f~~~~~~~~ 303 (346)
T 1ua2_A 274 GLFLFNPCARITATQALKMKYFSNRPGPTP 303 (346)
T ss_dssp HHHCSSTTTSCCHHHHHTSGGGTSSSCCCC
T ss_pred HHhccChhhCCCHHHHhcChhhhcCCCCCC
Confidence 799999999999999999999988765544
No 290
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=61.15 E-value=2.6 Score=44.86 Aligned_cols=30 Identities=27% Similarity=0.365 Sum_probs=26.1
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||.+......
T Consensus 294 ~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~ 323 (351)
T 3mi9_A 294 KLLVLDPAQRIDSDDALNHDFFWSDPMPSD 323 (351)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGGSSSCCCC
T ss_pred HHhcCChhhCCCHHHHhCCCCcCCCCCccc
Confidence 799999999999999999999977655443
No 291
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=61.13 E-value=2.3 Score=47.58 Aligned_cols=27 Identities=44% Similarity=0.739 Sum_probs=24.8
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+++++++||||..+..
T Consensus 338 ~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 364 (464)
T 3ttj_A 338 KMLVIDPAKRISVDDALQHPYINVWYD 364 (464)
T ss_dssp HHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred HHcCCChhhCCCHHHHhcChhhhhccC
Confidence 899999999999999999999987654
No 292
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=60.90 E-value=0.24 Score=54.23 Aligned_cols=142 Identities=8% Similarity=0.031 Sum_probs=83.4
Q ss_pred HHHHHHhcccCCCCCCcCcccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHH
Q psy767 45 LFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124 (902)
Q Consensus 45 ~~~~l~~~~~~~g~~~~A~~~f~~~~~~~~~~~g~~pd~~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~l 124 (902)
+|+-+..+....|.+.+|..-|-.... ...|..+|.+..+.|.+++-..++.-.++..-.|... +.|
T Consensus 56 VWs~LgkAqL~~~~v~eAIdsyIkA~D-----------ps~y~eVi~~A~~~~~~edLv~yL~MaRk~~ke~~ID--teL 122 (624)
T 3lvg_A 56 VWSQLAKAQLQKGMVKEAIDSYIKADD-----------PSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVE--TEL 122 (624)
T ss_dssp CSSSHHHHTTTSSSCTTTTTSSCCCSC-----------CCSSSHHHHHTTTSSCCTTHHHHHHTTSTTCCSTTTT--HHH
T ss_pred HHHHHHHHHHccCchHHHHHHHHhCCC-----------hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccH--HHH
Confidence 455566666666777776666655553 3456778888888888877777776555443344333 455
Q ss_pred HHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCC---------------
Q psy767 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG--------------- 189 (902)
Q Consensus 125 l~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g--------------- 189 (902)
+-+|++.+++.+-++++. .||......+-.-|...|.++.|.-+|..+....
T Consensus 123 ------i~ayAk~~rL~elEefl~-------~~N~A~iq~VGDrcf~e~lYeAAKilys~isN~akLAstLV~L~~yq~A 189 (624)
T 3lvg_A 123 ------IFALAKTNRLAELEEFIN-------GPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAA 189 (624)
T ss_dssp ------HHHHHTSCSSSTTTSTTS-------CCSSSCTHHHHHHHHHSCCSTTSSTTGGGSCCCTTTSSSSSSCSGGGSS
T ss_pred ------HHHHHhhCcHHHHHHHHc-------CCCcccHHHHHHHHHHccCHHHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 777888777554433321 2444555566666666666666655554332110
Q ss_pred -----CCCCHHHHHHHHHHHHHcCChhH
Q psy767 190 -----LEPSAQTYTKLMCGYAKHGDMDS 212 (902)
Q Consensus 190 -----~~pd~~ty~~ll~a~~~~g~~~~ 212 (902)
-.-++.||-.+-.+|...+.+.-
T Consensus 190 VdaArKAns~ktWKeV~~ACvd~~EfrL 217 (624)
T 3lvg_A 190 VDGARKANSTRTWKEVCFACVDGKEFRL 217 (624)
T ss_dssp TTTTTTCCSSCSHHHHTHHHHHSCTTTT
T ss_pred HHHHHhcCChhHHHHHHHHHhCchHHHH
Confidence 02244566666666666666554
No 293
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=60.19 E-value=2.3 Score=44.49 Aligned_cols=27 Identities=33% Similarity=0.549 Sum_probs=22.4
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||.+...
T Consensus 278 ~~L~~dP~~Rps~~e~l~hp~~~~~~~ 304 (316)
T 2ac3_A 278 KLLVRDAKQRLSAAQVLQHPWVQGCAP 304 (316)
T ss_dssp HHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred HHhhCChhhCCCHHHHhcChhhcCCCC
Confidence 799999999999999999999987644
No 294
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=59.53 E-value=8.1 Score=44.92 Aligned_cols=26 Identities=27% Similarity=0.586 Sum_probs=22.9
Q ss_pred CCCCCCcchhhhH-----HHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSC-----DQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 876 (902)
+||..||.+|++| +++++||||.++.
T Consensus 427 ~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id 457 (689)
T 3v5w_A 427 GLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457 (689)
T ss_dssp HHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred HHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence 6788999999985 9999999998874
No 295
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=59.43 E-value=33 Score=31.22 Aligned_cols=51 Identities=12% Similarity=0.043 Sum_probs=31.8
Q ss_pred CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCC
Q psy767 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL 294 (902)
Q Consensus 243 g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~ 294 (902)
++++.|.++|+.+.+.+-.- ...|-.-..-=.+.|++..|.+++..-...+
T Consensus 74 ~D~d~aR~vy~~a~~~hKkF-AKiwi~~AqFEiRqgnl~kARkILg~AiG~~ 124 (161)
T 4h7y_A 74 QEPDDARDYFQMARANCKKF-AFVHISFAQFELSQGNVKKSKQLLQKAVERG 124 (161)
T ss_dssp HCGGGCHHHHHHHHHHCTTB-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHcccHHHHHHHHHHHhccC
Confidence 56667777777665532122 5666666666667777777777777644433
No 296
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=59.39 E-value=56 Score=27.29 Aligned_cols=88 Identities=17% Similarity=0.106 Sum_probs=60.7
Q ss_pred CCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHH
Q psy767 97 EHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176 (902)
Q Consensus 97 g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~ 176 (902)
...++|..+-+.+...+. . -...+++ +..+.+.|++++|..+.+.+. .||.+.|-+|-. .+.|..+
T Consensus 21 H~HqEA~tIAdwL~~~~~---~-E~v~lIR----~sSLmNrG~Yq~Al~l~~~~c----~pdlepw~ALce--~rlGl~s 86 (116)
T 2p58_C 21 HYHEEANCIAEWLHLKGE---E-EAVQLIR----LSSLMNRGDYASALQQGNKLA----YPDLEPWLALCE--YRLGLGS 86 (116)
T ss_dssp TCHHHHHHHHHHHHHTTC---H-HHHHHHH----HHHHHHTTCHHHHHHHHTTSC----CGGGHHHHHHHH--HHHTCHH
T ss_pred hHHHHHHHHHHHHHhCCc---H-HHHHHHH----HHHHHcchhHHHHHHhcCCCC----CchHHHHHHHHH--HhcccHH
Confidence 456788888888877653 2 2223322 445667899999998887665 688888887754 5678888
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHH
Q psy767 177 SAEGILTMMSQAGLEPSAQTYTK 199 (902)
Q Consensus 177 ~A~~l~~~M~~~g~~pd~~ty~~ 199 (902)
++..-+.++-..| .|....|..
T Consensus 87 ~le~rL~~la~sg-~p~~q~Fa~ 108 (116)
T 2p58_C 87 ALESRLNRLARSQ-DPRIQTFVN 108 (116)
T ss_dssp HHHHHHHHHTTCC-CHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CHHHHHHHH
Confidence 8888888887776 555555543
No 297
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=59.33 E-value=26 Score=37.74 Aligned_cols=55 Identities=7% Similarity=0.029 Sum_probs=45.9
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy767 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290 (902)
Q Consensus 235 ~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m 290 (902)
+...+...|+.++|...+..+.... +.+...|..+|.+|.+.|+..+|++.|++.
T Consensus 177 ~~~~~l~~g~~~~a~~~l~~~~~~~-P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~ 231 (388)
T 2ff4_A 177 KAEAEIACGRASAVIAELEALTFEH-PYREPLWTQLITAYYLSDRQSDALGAYRRV 231 (388)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3444556788999988888877654 678899999999999999999999999974
No 298
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=59.13 E-value=46 Score=29.23 Aligned_cols=81 Identities=9% Similarity=0.008 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHH---HHHHHHHHHHCCCCC--CHHHHHHHHHHHHHcCChhHHH
Q psy767 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS---AEGILTMMSQAGLEP--SAQTYTKLMCGYAKHGDMDSIK 214 (902)
Q Consensus 140 ~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~---A~~l~~~M~~~g~~p--d~~ty~~ll~a~~~~g~~~~a~ 214 (902)
+..+.+-|......|. |+..+--.+..++.++..... ++.++++....+ .| .....-.|.-++.+.|+++.|.
T Consensus 17 l~~~~~~y~~e~~~~~-~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~-~p~~~Rd~lY~LAvg~yklg~Y~~A~ 94 (126)
T 1nzn_A 17 LLKFEKKFQSEKAAGS-VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEKAL 94 (126)
T ss_dssp HHHHHHHHHHHHHHSC-CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS-CHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHhccCC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHhhhHHHHH
Confidence 3344444443333332 444444444444555544333 555555554442 12 1112223344455555555555
Q ss_pred HHHHhccc
Q psy767 215 TKIPSLKP 222 (902)
Q Consensus 215 ~l~~~~~~ 222 (902)
+.++.+.+
T Consensus 95 ~~~~~lL~ 102 (126)
T 1nzn_A 95 KYVRGLLQ 102 (126)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 54444433
No 299
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=59.12 E-value=2.8 Score=43.88 Aligned_cols=30 Identities=33% Similarity=0.555 Sum_probs=27.0
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||..++....
T Consensus 279 ~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~~ 308 (326)
T 1blx_A 279 KCLTFNPAKRISAYSALSHPYFQDLERCKE 308 (326)
T ss_dssp HHSCSSTTTSCCHHHHHTSGGGTTCCCCCC
T ss_pred HHcCCCcccCCCHHHHhcCccccccchhhh
Confidence 899999999999999999999988876543
No 300
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=58.57 E-value=2.7 Score=43.48 Aligned_cols=29 Identities=38% Similarity=0.626 Sum_probs=21.6
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+|++.||.+|.+.+++++||||.+.+...
T Consensus 270 ~~l~~dp~~Rps~~~ll~h~~~~~~~~~~ 298 (303)
T 2vwi_A 270 LCLQKDPEKRPTAAELLRHKFFQKAKNKE 298 (303)
T ss_dssp HHCCSSGGGSCCHHHHHTSTTC-------
T ss_pred HHccCChhhCcCHHHHhhChhhhcCCCCc
Confidence 79999999999999999999998876543
No 301
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=58.53 E-value=1.7 Score=46.11 Aligned_cols=29 Identities=17% Similarity=0.440 Sum_probs=26.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||.++....
T Consensus 313 ~~l~~~p~~Rps~~~~l~hp~~~~~~~~~ 341 (345)
T 3hko_A 313 NLLNRNVDERFDAMRALQHPWISQFSDKI 341 (345)
T ss_dssp HHSCSCTTTSCCHHHHHHSHHHHTTSSCS
T ss_pred HHcCCChhHCCCHHHHhcChhhccChHhh
Confidence 78999999999999999999999987654
No 302
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=58.52 E-value=4.3 Score=43.24 Aligned_cols=29 Identities=28% Similarity=0.446 Sum_probs=26.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+++++++||||.+.....
T Consensus 288 ~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~ 316 (349)
T 2w4o_A 288 KLIVLDPKKRLTTFQALQHPWVTGKAANF 316 (349)
T ss_dssp TTSCSSGGGSCCHHHHHHSTTTTSTTCCC
T ss_pred HHccCChhhCcCHHHHhcCcccCCCccch
Confidence 89999999999999999999998776554
No 303
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=57.98 E-value=53 Score=27.42 Aligned_cols=88 Identities=16% Similarity=0.058 Sum_probs=62.4
Q ss_pred CCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHH
Q psy767 97 EHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176 (902)
Q Consensus 97 g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~ 176 (902)
...++|..+-+.+...+. . -...+++ +..+.+.|++++|..+.+.+. .||.+.|-+|-. .+.|..+
T Consensus 20 H~HqEA~tIAdwL~~~~~---~-E~v~lIR----~sSLmNrG~Yq~Al~l~~~~c----~pdlepw~ALce--~rlGl~s 85 (115)
T 2uwj_G 20 HCHEEALCIAEWLERLGQ---D-EAARLIR----ISSLANQGRYQEALAFAHGNP----WPALEPWFALCE--WHLGLGA 85 (115)
T ss_dssp TCHHHHHHHHHHHHHTTC---H-HHHHHHH----HHHHHHTTCHHHHHGGGTTCC----CGGGHHHHHHHH--HHTTCHH
T ss_pred hHHHHHHHHHHHHHhCCc---H-HHHHHHH----HHHHHcchhHHHHHHhcCCCC----CchHHHHHHHHH--HhcccHH
Confidence 456788888888877653 2 2223322 455667899999998876654 788888887744 5788888
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHH
Q psy767 177 SAEGILTMMSQAGLEPSAQTYTK 199 (902)
Q Consensus 177 ~A~~l~~~M~~~g~~pd~~ty~~ 199 (902)
++..-+.++-..| .|....|..
T Consensus 86 ~le~rL~~la~sg-~p~~q~Fa~ 107 (115)
T 2uwj_G 86 ALDRRLAGLGGSS-DPALADFAA 107 (115)
T ss_dssp HHHHHHHHHHTCS-SHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CHHHHHHHH
Confidence 9888888888877 555555554
No 304
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=57.64 E-value=2.6 Score=43.36 Aligned_cols=24 Identities=29% Similarity=0.700 Sum_probs=22.1
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||+.||.+|.+.+++++||||.+
T Consensus 265 ~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 265 GCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHccCChhhCCCHHHHhhCccccc
Confidence 799999999999999999999964
No 305
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=57.37 E-value=3.3 Score=42.81 Aligned_cols=29 Identities=38% Similarity=0.505 Sum_probs=26.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||.++....
T Consensus 258 ~~l~~dp~~Rps~~~ll~h~~~~~~~~~~ 286 (302)
T 2j7t_A 258 IALDKNPETRPSAAQLLEHPFVSSITSNK 286 (302)
T ss_dssp HHSCSCTTTSCCHHHHTTSTTTTTCCCCH
T ss_pred HHcccChhhCCCHHHHhcChHHhhhccch
Confidence 78999999999999999999999887644
No 306
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=56.63 E-value=4.8 Score=46.23 Aligned_cols=28 Identities=29% Similarity=0.367 Sum_probs=24.8
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFE 878 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (902)
+||..||.+|.+++++++||||......
T Consensus 393 ~~L~~dp~~R~t~~e~l~Hpw~~~~~~~ 420 (573)
T 3uto_A 393 KLLLADPNTRMTIHQALEHPWLTPGNAP 420 (573)
T ss_dssp TTSCSSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred HHccCChhHCcCHHHHhcCcCcCCCCCC
Confidence 7899999999999999999999765543
No 307
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=56.63 E-value=4.4 Score=42.40 Aligned_cols=27 Identities=26% Similarity=0.420 Sum_probs=24.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||.+...
T Consensus 255 ~~l~~dp~~Rps~~e~l~hp~~~~~~~ 281 (321)
T 2a2a_A 255 KLLVKETRKRLTIQEALRHPWITPVDN 281 (321)
T ss_dssp TTSCSSTTTSCCHHHHHHSTTTSCSSH
T ss_pred HHcCCChhhCcCHHHHhcCccccCCCc
Confidence 899999999999999999999987653
No 308
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=56.59 E-value=2.9 Score=43.51 Aligned_cols=25 Identities=28% Similarity=0.417 Sum_probs=21.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+.+++++||||..-
T Consensus 279 ~~L~~dP~~R~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 279 EMLTFNPHKRISAFRALQHSYLHKD 303 (308)
T ss_dssp HHTCSSTTTSCCHHHHHTSTTC---
T ss_pred HHhcCCCccCCCHHHHhcCccccCC
Confidence 8999999999999999999999764
No 309
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=55.35 E-value=1.9 Score=46.49 Aligned_cols=28 Identities=39% Similarity=0.619 Sum_probs=25.2
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFE 878 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (902)
+||..||.+|.+++++++||||..+...
T Consensus 301 ~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 328 (371)
T 2xrw_A 301 KMLVIDASKRISVDEALQHPYINVWYDP 328 (371)
T ss_dssp HHSCSSGGGSCCHHHHHHSHHHHTTCCH
T ss_pred HHCcCChhhCCCHHHHhCCcchhhhcCc
Confidence 8999999999999999999999876543
No 310
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=54.84 E-value=3.4 Score=42.64 Aligned_cols=27 Identities=33% Similarity=0.771 Sum_probs=24.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+++++++||||.++..
T Consensus 266 ~~l~~dp~~Rps~~~ll~h~~~~~~~~ 292 (298)
T 1phk_A 266 RFLVVQPQKRYTAEEALAHPFFQQYVV 292 (298)
T ss_dssp HHCCSSGGGSCCHHHHTTSGGGCTTC-
T ss_pred HHccCCcccCCCHHHHHhChHhhhccc
Confidence 889999999999999999999987654
No 311
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=54.58 E-value=36 Score=30.20 Aligned_cols=63 Identities=17% Similarity=0.201 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q psy767 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202 (902)
Q Consensus 139 ~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~ 202 (902)
|.=+..+-++.+...++.|+.....+.+++|-|.+++..|.++|+-.+.. +.+...+|..++.
T Consensus 68 D~wElrrglN~l~~~DlVPeP~Ii~AALrAcRRvNDfalAVR~lE~vK~K-~~~~~~iY~y~lq 130 (152)
T 2y69_E 68 DAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDK-AGPHKEIYPYVIQ 130 (152)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-TTTCTTHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-cCCchhhHHHHHH
Confidence 33355666777778888899999999999999999999999999888754 2334446766654
No 312
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=54.21 E-value=2.2 Score=44.83 Aligned_cols=29 Identities=21% Similarity=0.480 Sum_probs=26.1
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+|++.||.+|.+.+++++||||.+.....
T Consensus 276 ~~l~~dp~~Rps~~~ll~hp~~~~~~~~~ 304 (320)
T 3a99_A 276 WCLALRPSDRPTFEEIQNHPWMQDVLLPQ 304 (320)
T ss_dssp HHTCSSGGGSCCHHHHHTSGGGSSCCCHH
T ss_pred HHccCChhhCcCHHHHhcCHhhcCccCcc
Confidence 79999999999999999999999876544
No 313
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=53.87 E-value=3.2 Score=44.29 Aligned_cols=23 Identities=35% Similarity=0.502 Sum_probs=22.1
Q ss_pred CCCCCCcchhhhHHHhhcCCCcc
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFN 873 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~ 873 (902)
+||+.||.+|.+.+++++||||.
T Consensus 338 ~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 338 SILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHCCSSGGGSCCHHHHTTSGGGC
T ss_pred HHhcCChhhCCCHHHHhcCcccC
Confidence 89999999999999999999994
No 314
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=53.82 E-value=3.5 Score=42.02 Aligned_cols=25 Identities=28% Similarity=0.323 Sum_probs=21.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+++++++||||.+-
T Consensus 262 ~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 262 VMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HHTCSSGGGSCCHHHHHTCTTC---
T ss_pred HHhCCCcccCCCHHHHhhChHhhhh
Confidence 7999999999999999999999764
No 315
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=53.31 E-value=3.9 Score=43.88 Aligned_cols=26 Identities=27% Similarity=0.475 Sum_probs=23.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+++++++||||.+..
T Consensus 255 ~~L~~dP~~R~t~~e~l~hp~~~~~~ 280 (361)
T 2yab_A 255 KLLVKETRKRLTIQEALRHPWITPVD 280 (361)
T ss_dssp HHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred HHCCCChhHCcCHHHHhcCcCcCCCc
Confidence 78999999999999999999998654
No 316
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=53.11 E-value=0.88 Score=47.96 Aligned_cols=30 Identities=30% Similarity=0.500 Sum_probs=26.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||.+......
T Consensus 269 ~~l~~dp~~Rps~~~ll~hp~~~~~~~~~~ 298 (326)
T 2x7f_A 269 SCLVKNHSQRPATEQLMKHPFIRDQPNERQ 298 (326)
T ss_dssp HHCCSSGGGSCCHHHHHTSHHHHCCTTHHH
T ss_pred HHhccChhhCCCHHHHhhChHHhhCccccc
Confidence 899999999999999999999987665443
No 317
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=53.07 E-value=4.1 Score=41.32 Aligned_cols=28 Identities=14% Similarity=0.288 Sum_probs=24.4
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFE 878 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (902)
+||+.||.+|.+.+++++||||.+....
T Consensus 244 ~~l~~~p~~Rps~~~il~~~~~~~~~~~ 271 (276)
T 2yex_A 244 KILVENPSARITIPDIKKDRWYNKPLKK 271 (276)
T ss_dssp HHSCSSTTTSCCHHHHTTCTTTTCCCC-
T ss_pred HHCCCCchhCCCHHHHhcCccccChhhc
Confidence 7899999999999999999999766443
No 318
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=52.56 E-value=3.7 Score=45.44 Aligned_cols=27 Identities=30% Similarity=0.698 Sum_probs=24.2
Q ss_pred CCCCCCcchhh-----hHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRW-----SCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|. +.+++++||||.++..
T Consensus 382 ~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~ 413 (446)
T 4ejn_A 382 GLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 413 (446)
T ss_dssp HHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred HHcccCHHHhCCCCCCCHHHHHhCccccCCCH
Confidence 68889999999 9999999999998743
No 319
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=52.41 E-value=1.5e+02 Score=30.50 Aligned_cols=265 Identities=14% Similarity=0.151 Sum_probs=123.5
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHH----HHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHH--HHHHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEG----VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT--YTKLMCGY 204 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~----~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t--y~~ll~a~ 204 (902)
+...++.|+++-+..+++. |..||.. -++.|..+ +..|+.+- .+.+.+.|..|+... ....+...
T Consensus 29 L~~Av~~g~~~~V~~LL~~----Gadvn~~~~~~g~TpLh~A-~~~g~~~i----v~~Ll~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 29 LIKAVQNEDVDLVQQLLEG----GANVNFQEEEGGWTPLHNA-VQMSREDI----VELLLRHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHTTCHHHHHHHHHH----TCCTTCCCTTTCCCHHHHH-HHTTCHHH----HHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHC----CCCCCccCCCCCcCHHHHH-HHcCCHHH----HHHHHHcCCchhhhccCCCchhHHH
Confidence 6666889999887777754 4433321 24445444 56677654 445556665544211 11122233
Q ss_pred HHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHHHHHHHHHHCCCCCCHH-------------HHHHHH
Q psy767 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ-------------TYTKLM 271 (902)
Q Consensus 205 ~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~l~~~m~~~g~~pd~~-------------ty~~LI 271 (902)
...+.......+......... .+.... +.....+..|..+.+..+ .+.|..++.. -++ .+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~-~d~~g~-t~l~~A~~~~~~~~~~~l----l~~ga~~~~~~~~~~~~~~~~~~g~T-~L 172 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNE-CDFYGF-TAFMEAAVYGKVKALKFL----YKRGANVNLRRKTKEDQERLRKGGAT-AL 172 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTC-BCTTCC-BHHHHHHHTTCHHHHHHH----HHTTCCTTCCCCCC-----CTTCSCC-HH
T ss_pred HhcccchhhHHhhhccchhhh-hccCCC-CHHHHHHHcCcHHHHHHH----HHcCCCcchhhccccccccccCCCCc-HH
Confidence 333444433333322211110 111100 112233445665554443 3444332210 112 23
Q ss_pred HHHHHcCCHHHHHHHHHHhccCCCCCC---HHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCCCCHH-
Q psy767 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ- 347 (902)
Q Consensus 272 ~a~~~~g~~~~A~~lf~~m~~~~~~p~---~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~p~~~- 347 (902)
...++.|+.+-+..++.+........+ ...+..++ ..+.....+.+.. .+.+.|..++..
T Consensus 173 ~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~-~~~~~~~~~~i~~---------------lLl~~gad~n~~d 236 (337)
T 4g8k_A 173 MDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL-LSSDDSDVEAITH---------------LLLDHGADVNVRG 236 (337)
T ss_dssp HHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHH-HHSCTTTHHHHHH---------------HHHHTTCCTTCCC
T ss_pred HHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHH-HHcCcccHHHHHH---------------HHHHCCCCCCCcC
Confidence 444567887766666654322111111 12222222 2233333333332 245666665432
Q ss_pred -HHHHHHHHHHHcCCHHHHHHHHHHcCCCCCccc---HHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHHHHHHHHH
Q psy767 348 -TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423 (902)
Q Consensus 348 -t~~~Li~~y~~~g~~~~A~~~~~~m~~~~~~~~---~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t~i~~l~~ 423 (902)
...+.+...+..|..+.+..++..-.......+ ++.|. ..+..|+.+-+. .+.+ .|..++..+.+...++
T Consensus 237 ~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~-~A~~~g~~~iv~----~Ll~-~GAd~n~~~~L~~A~~ 310 (337)
T 4g8k_A 237 ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALL-LAVELKLKKIAE----LLCK-RGASTDCGDLVMTARR 310 (337)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHH-HHHHTTCHHHHH----HHHT-TSCSSTTCCHHHHHHH
T ss_pred CCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHH-HHHHcCCHHHHH----HHHH-CCCCCCCCCHHHHHHH
Confidence 222345566788888888877764333322222 33333 345667765443 3344 6777776665555567
Q ss_pred cCCHHHHHHH
Q psy767 424 KGQIDAAYRI 433 (902)
Q Consensus 424 ~g~~~~A~~~ 433 (902)
.|+.+-+.-+
T Consensus 311 ~~~~~iv~~L 320 (337)
T 4g8k_A 311 NYDHSLVKVL 320 (337)
T ss_dssp TTCHHHHHHH
T ss_pred cCCHHHHHHH
Confidence 7777644433
No 320
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=52.18 E-value=46 Score=27.94 Aligned_cols=64 Identities=14% Similarity=0.216 Sum_probs=50.5
Q ss_pred CchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHH
Q psy767 98 HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168 (902)
Q Consensus 98 ~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~ 168 (902)
+.-+..+-++.+....+.|+..+..+. +.+|-|.+++..|.++|+-.+.+. .+...+|..+++-
T Consensus 25 D~~e~rrglN~l~~~DlVP~P~ii~aa------LrAcRRvND~alAVR~lE~iK~K~-~~~~~iY~~~lqE 88 (109)
T 1v54_E 25 DAWELRKGMNTLVGYDLVPEPKIIDAA------LRACRRLNDFASAVRILEVVKDKA-GPHKEIYPYVIQE 88 (109)
T ss_dssp CHHHHHHHHHHHTTSSBCCCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHT-TTCTTHHHHHHHH
T ss_pred cHHHHHHHHHHHhccccCCCcHHHHHH------HHHHHHhhhHHHHHHHHHHHHHHh-cCchhhHHHHHHH
Confidence 344566677777777889999999999 999999999999999999987654 3335568777653
No 321
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=52.11 E-value=1.4e+02 Score=30.48 Aligned_cols=84 Identities=10% Similarity=0.052 Sum_probs=41.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCCCCccc--HHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHHHHHHHHHcCCHHH
Q psy767 352 LMCGYAKHGDMDSIRRLLAQNGSSLVNGD--YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDA 429 (902)
Q Consensus 352 Li~~y~~~g~~~~A~~~~~~m~~~~~~~~--~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t~i~~l~~~g~~~~ 429 (902)
-+...++.|+.+....++..........+ -.+.+...+..|+.+.+..+++.-........+..|.+...+..|+.+-
T Consensus 27 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~i 106 (351)
T 3utm_A 27 ELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEV 106 (351)
T ss_dssp HHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred hHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHH
Confidence 34445567777777777665333322222 1234445556677665555554321101111122244555566677665
Q ss_pred HHHHHH
Q psy767 430 AYRIVN 435 (902)
Q Consensus 430 A~~~~~ 435 (902)
+..+++
T Consensus 107 v~~Ll~ 112 (351)
T 3utm_A 107 TELLLK 112 (351)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544443
No 322
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=51.92 E-value=2.1e+02 Score=30.59 Aligned_cols=89 Identities=10% Similarity=-0.061 Sum_probs=55.4
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHccCCCC---CccchHHHHHHHHHHcCCCHHHHHHHHHHHHHC--CCCCChhhHHHHH
Q psy767 475 HIYHLINKGQIDAAYRIVNTLARSANING---EQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDE--NLHPRAFNLAVLI 549 (902)
Q Consensus 475 li~~~~k~g~~~~A~~l~~~m~~~~~~~~---~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~--g~~Pd~~t~~~ll 549 (902)
+...|...|++.+|.+++..+...-.... ....+|-.-+..|...+. ..++...+...... .+.|++..-..+-
T Consensus 105 L~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n-~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 105 LIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSN-LPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 56668899999999999998887532211 123466777888888888 99999888875322 2334444333332
Q ss_pred HHhccccc-ccCcchh
Q psy767 550 KAHVLKED-YTGAVET 564 (902)
Q Consensus 550 ~a~~~~~~-~~g~~~~ 564 (902)
.+.+.-.. ..+++..
T Consensus 184 ~~~Gi~~l~~~rdyk~ 199 (394)
T 3txn_A 184 LQSGILHAADERDFKT 199 (394)
T ss_dssp HHHHHHHHHTTSCHHH
T ss_pred HHhhHHHHHhccCHHH
Confidence 22212223 4556666
No 323
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=51.72 E-value=5.1 Score=42.09 Aligned_cols=26 Identities=15% Similarity=0.337 Sum_probs=23.6
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+.+++++||||....
T Consensus 244 ~~L~~dP~~R~t~~eil~h~~~~~~~ 269 (323)
T 3tki_A 244 KILVENPSARITIPDIKKDRWYNKPL 269 (323)
T ss_dssp HHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHccCChhhCcCHHHHhhChhhcccc
Confidence 78999999999999999999997643
No 324
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=51.02 E-value=4 Score=42.42 Aligned_cols=30 Identities=33% Similarity=0.582 Sum_probs=23.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||....+..+
T Consensus 266 ~~l~~~p~~Rps~~e~l~~~~~~~~~~~~~ 295 (312)
T 2iwi_A 266 RCLAPKPSSRPSLEEILLDPWMQTPAEDVP 295 (312)
T ss_dssp HHTCSSTTTSCCHHHHHHSTTTCC------
T ss_pred HHccCChhhCcCHHHHhcChhhcCchhccc
Confidence 799999999999999999999998887766
No 325
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=50.75 E-value=2.6 Score=42.97 Aligned_cols=24 Identities=29% Similarity=0.527 Sum_probs=22.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||+.||.+|.+.+++++||||..
T Consensus 245 ~~l~~dP~~Rps~~e~l~h~~f~~ 268 (275)
T 2eue_A 245 RMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp HHSCSSGGGSCCHHHHTTCHHHHT
T ss_pred HHhhcCHhHCCCHHHHhhCCeecc
Confidence 799999999999999999999975
No 326
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=50.63 E-value=4.4 Score=41.22 Aligned_cols=26 Identities=27% Similarity=0.545 Sum_probs=22.2
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+.+++++||||....
T Consensus 245 ~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 245 QLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HHcccCHhhCCCHHHHhcCccccCCC
Confidence 78999999999999999999997644
No 327
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=50.26 E-value=1.8 Score=46.70 Aligned_cols=27 Identities=26% Similarity=0.180 Sum_probs=25.0
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||.++..
T Consensus 335 ~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 361 (371)
T 3q60_A 335 RFLNFDRRRRLLPLEAMETPEFLQLQN 361 (371)
T ss_dssp HHTCSSTTTCCCHHHHTTSHHHHHHHH
T ss_pred HHcCCChhhCCCHHHHhcCHHHHHHHH
Confidence 899999999999999999999987654
No 328
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=50.18 E-value=3.3 Score=44.33 Aligned_cols=26 Identities=31% Similarity=0.644 Sum_probs=23.3
Q ss_pred CCCCCCcchhhhH------HHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSC------DQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~------~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.++ +++++||||.++.
T Consensus 257 ~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~ 288 (353)
T 3txo_A 257 SFMTKNPTMRLGSLTQGGEHAILRHPFFKEID 288 (353)
T ss_dssp HHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred HHhhhCHHHccCCcccCCHHHHhhCCcccCCC
Confidence 6788999999998 9999999998864
No 329
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=50.06 E-value=3.4 Score=42.78 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=25.4
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+|++.||.+|.+.+++++||||.......+
T Consensus 246 ~~l~~dp~~Rps~~~ll~~~~~~~~~~~~~ 275 (305)
T 2wtk_C 246 GMLEYEPAKRFSIRQIRQHSWFRKKHPPAE 275 (305)
T ss_dssp HHTCSSTTTSCCHHHHHHSHHHHSCCCC-C
T ss_pred HHccCChhhCCCHHHHhcCcccccCCCCcC
Confidence 688999999999999999999987665443
No 330
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=50.06 E-value=2.5 Score=43.27 Aligned_cols=29 Identities=34% Similarity=0.421 Sum_probs=26.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||..++...
T Consensus 248 ~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 248 RLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp TTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred HHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 89999999999999999999998876554
No 331
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=50.04 E-value=4.5 Score=42.54 Aligned_cols=26 Identities=35% Similarity=0.548 Sum_probs=23.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+++++++||||....
T Consensus 254 ~~L~~dP~~Rpt~~e~l~hp~~~~~~ 279 (326)
T 2y0a_A 254 RLLVKDPKKRMTIQDSLQHPWIKPKD 279 (326)
T ss_dssp HHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred HHccCChhhCCCHHHHhcCCCccCCc
Confidence 78999999999999999999997643
No 332
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=49.87 E-value=6.7 Score=42.45 Aligned_cols=26 Identities=31% Similarity=0.639 Sum_probs=24.0
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+++++++||||.+..
T Consensus 287 ~~L~~dP~~Rpt~~ell~hp~~~~~~ 312 (387)
T 1kob_A 287 NLLQKEPRKRLTVHDALEHPWLKGDH 312 (387)
T ss_dssp TTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred HHcCCChhHCcCHHHHhhCccccCCc
Confidence 89999999999999999999997654
No 333
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=49.85 E-value=3 Score=44.96 Aligned_cols=27 Identities=26% Similarity=0.429 Sum_probs=24.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+++++++||||...+.
T Consensus 325 ~~L~~dp~~Rps~~e~l~hp~~~~~~~ 351 (373)
T 2x4f_A 325 KLLIKEKSWRISASEALKHPWLSDHKL 351 (373)
T ss_dssp TTSCSSGGGSCCHHHHHHSHHHHCHHH
T ss_pred HHcCCChhhCCCHHHHhcCcCcCCCch
Confidence 899999999999999999999987643
No 334
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=49.47 E-value=4.1 Score=41.83 Aligned_cols=24 Identities=46% Similarity=0.689 Sum_probs=22.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||+.||.+|.+.+++++||||..
T Consensus 261 ~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 261 QMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred HHccCChhhCcCHHHHhcCHHhhc
Confidence 799999999999999999999964
No 335
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=49.33 E-value=4.2 Score=44.22 Aligned_cols=26 Identities=35% Similarity=0.746 Sum_probs=23.0
Q ss_pred CCCCCCcchhhhH------HHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSC------DQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~------~~~~~~~~~~~~~ 876 (902)
+||+.||.+|++| +++++||||.++.
T Consensus 295 ~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~ 326 (396)
T 4dc2_A 295 SFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 326 (396)
T ss_dssp HHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCC
T ss_pred HHhcCCHhHcCCCCCCCCHHHHhcCccccCCC
Confidence 6888999999997 7999999998863
No 336
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=49.32 E-value=3.3 Score=42.91 Aligned_cols=28 Identities=32% Similarity=0.450 Sum_probs=24.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFE 878 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (902)
+||+.||.+|.+.+++++||||......
T Consensus 252 ~~l~~dp~~Rps~~ell~h~~~~~~~~~ 279 (297)
T 3fxz_A 252 RCLEMDVEKRGSAKELLQHQFLKIAKPL 279 (297)
T ss_dssp HHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred HHccCChhHCcCHHHHhhChhhcccCcc
Confidence 7999999999999999999999865543
No 337
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=49.12 E-value=4.5 Score=44.62 Aligned_cols=26 Identities=31% Similarity=0.625 Sum_probs=23.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+++++++||||.++.
T Consensus 266 ~~L~~dP~~Rps~~evl~hp~f~~~~ 291 (432)
T 3p23_A 266 KMIAMDPQKRPSAKHVLKHPFFWSLE 291 (432)
T ss_dssp HHSCSSGGGSCCHHHHHTSTTTCCHH
T ss_pred HHHhCCHhhCCCHHHHHhCccccChH
Confidence 78999999999999999999997643
No 338
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=48.90 E-value=4.1 Score=43.20 Aligned_cols=24 Identities=33% Similarity=0.704 Sum_probs=22.8
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||+.||.+|.+.+++++||||..
T Consensus 241 ~~L~~dP~~Rpt~~eil~hp~~~~ 264 (336)
T 3h4j_B 241 RMIVADPMQRITIQEIRRDPWFNV 264 (336)
T ss_dssp TTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred HHcCCChhHCcCHHHHHhChhhcc
Confidence 899999999999999999999964
No 339
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=48.83 E-value=13 Score=43.60 Aligned_cols=26 Identities=23% Similarity=0.496 Sum_probs=22.9
Q ss_pred CCCCCCcchhhhH-----HHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSC-----DQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 876 (902)
++|+.||.+|+.+ +++++||||.++.
T Consensus 575 ~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~ 605 (674)
T 3pfq_A 575 GLMTKHPGKRLGCGPEGERDIKEHAFFRYID 605 (674)
T ss_dssp HHSCSSSTTCTTCSTTHHHHHHSSGGGSSCC
T ss_pred HHccCCHHHCCCCCCCcHHHHhcCccccCCC
Confidence 5788899999998 9999999998864
No 340
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=48.48 E-value=3.1 Score=44.31 Aligned_cols=24 Identities=17% Similarity=0.386 Sum_probs=22.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||..||.+|.+++++++||||..
T Consensus 259 ~~L~~dP~~R~s~~e~l~hp~~~~ 282 (350)
T 4b9d_A 259 QLFKRNPRDRPSVNSILEKGFIAK 282 (350)
T ss_dssp HHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred HHccCChhHCcCHHHHhcCHHhhc
Confidence 789999999999999999999954
No 341
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=48.27 E-value=4.3 Score=43.18 Aligned_cols=26 Identities=35% Similarity=0.746 Sum_probs=22.9
Q ss_pred CCCCCCcchhhhH------HHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSC------DQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~------~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+| +++++||||.++.
T Consensus 252 ~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~ 283 (345)
T 3a8x_A 252 SFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 283 (345)
T ss_dssp HHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCC
T ss_pred HHhcCCHhHCCCCCCcCCHHHHhcCCccCCCC
Confidence 6888999999997 8999999998764
No 342
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=48.09 E-value=4.3 Score=44.56 Aligned_cols=24 Identities=33% Similarity=0.721 Sum_probs=22.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||+.||.+|.+.+++++||||.+
T Consensus 382 ~~L~~dP~~Rps~~e~l~hp~~~~ 405 (419)
T 3i6u_A 382 KLLVVDPKARFTTEEALRHPWLQD 405 (419)
T ss_dssp HHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred HHccCChhHCcCHHHHhCCcccCC
Confidence 789999999999999999999965
No 343
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=47.75 E-value=4.7 Score=42.34 Aligned_cols=27 Identities=26% Similarity=0.396 Sum_probs=24.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+++++++||||.....
T Consensus 240 ~~L~~dp~~Rpt~~e~l~hp~~~~~~~ 266 (321)
T 1tki_A 240 RLLVKERKSRMTASEALQHPWLKQKIE 266 (321)
T ss_dssp TTSCSSGGGSCCHHHHHHSHHHHSCGG
T ss_pred HHcCCChhHCcCHHHHhcChhhccCcc
Confidence 799999999999999999999976543
No 344
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=47.60 E-value=1.7 Score=45.36 Aligned_cols=30 Identities=30% Similarity=0.474 Sum_probs=26.4
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||.++.....
T Consensus 266 ~~l~~dp~~Rps~~~ll~h~~~~~~~~~~~ 295 (318)
T 2dyl_A 266 DCLTKDHRKRPKYNKLLEHSFIKRYETLEV 295 (318)
T ss_dssp HHTCSCTTTSCCHHHHTTSHHHHHHHHSCC
T ss_pred HHccCChhHCcCHHHHhhCHHHHhcccccc
Confidence 899999999999999999999987765443
No 345
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=47.09 E-value=3.7e+02 Score=30.63 Aligned_cols=325 Identities=11% Similarity=0.090 Sum_probs=0.0
Q ss_pred HHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHH
Q psy767 90 LRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169 (902)
Q Consensus 90 i~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~ 169 (902)
+....+.|++..+..+...|...-+.|-. .|..+ ...+ .....+++...+.. ..+.+.....-+.-+..+
T Consensus 13 a~~a~~~~~~~~~~~l~~~l~~~pL~~yl-~y~~l------~~~l-~~~~~~ev~~Fl~~--~~~~p~~~~Lr~~~l~~l 82 (618)
T 1qsa_A 13 IKQAWDNRQMDVVEQMMPGLKDYPLYPYL-EYRQI------TDDL-MNQPAVTVTNFVRA--NPTLPPARTLQSRFVNEL 82 (618)
T ss_dssp HHHHHHTTCHHHHHHHSGGGTTSTTHHHH-HHHHH------HHTG-GGCCHHHHHHHHHH--CTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHhhcCCCcHHHH-HHHHH------HhCc-ccCCHHHHHHHHHH--CCCChhHHHHHHHHHHHH
Q ss_pred HhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHH
Q psy767 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249 (902)
Q Consensus 170 ~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~ 249 (902)
++.+++...+.++.. . ..+...-.....+....|+..+|......+...+..... .+.
T Consensus 83 ~~~~~w~~~l~~~~~-~----p~~~~~~c~~~~A~~~~G~~~~a~~~~~~lW~~~~~~p~-----------------~c~ 140 (618)
T 1qsa_A 83 ARREDWRGLLAFSPE-K----PGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGKSQPN-----------------ACD 140 (618)
T ss_dssp HHTTCHHHHHHHCCS-C----CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHHSCSSCCCT-----------------HHH
T ss_pred HhCCCHHHHHHhccC-C----CCCHHHHHHHHHHHHHcCChhHHHHHHHHHHhCCCCCcH-----------------HHH
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHH-cCCcccHHHHHHHHHHhhhh
Q psy767 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV-SGHGEYIDEVSAIVCFVNIC 328 (902)
Q Consensus 250 ~l~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~-~~~~~~~~~~~~l~~~~~~~ 328 (902)
.+|..+.+.|.-.+..+|.-+ ......|+...|..+... +.++...+...+.. ..++..+...
T Consensus 141 ~l~~~~~~~g~lt~~~~~~R~-~~al~~~~~~~a~~l~~~-----l~~~~~~~a~~~~al~~~p~~~~~~---------- 204 (618)
T 1qsa_A 141 KLFSVWRASGKQDPLAYLERI-RLAMKAGNTGLVTVLAGQ-----MPADYQTIASAIISLANNPNTVLTF---------- 204 (618)
T ss_dssp HHHHHHHHTTCSCHHHHHHHH-HHHHHTTCHHHHHHHHHT-----CCGGGHHHHHHHHHHHHCGGGHHHH----------
T ss_pred HHHHHHHHCCCCCHHHHHHHH-HHHHHCCCHHHHHHHHHh-----CCHHHHHHHHHHHHHHhChHhHHHH----------
Q ss_pred hcccccchHHhcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHcCCCCCccc------HHHHHHHHHHcCChHHHHHHHH
Q psy767 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD------YLDIIHALAVSGHGEYIDEIIS 402 (902)
Q Consensus 329 ~~~~~~~~m~~~g~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m~~~~~~~~------~~~li~~~~~~g~~~~A~~l~~ 402 (902)
....+..+-..-...+.-......+.+.|...|........... +..+...+...+...++...+.
T Consensus 205 --------~~~~~~~~~~~~~~~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~ 276 (618)
T 1qsa_A 205 --------ARTTGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRD 276 (618)
T ss_dssp --------HHHSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHH
T ss_pred --------HhccCCChhhHHHHHHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Q ss_pred HcccCCCCCCCHHHHHHHHH-HcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHh
Q psy767 403 KIQPGVGYSADAANHIYHLI-NKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLIN 481 (902)
Q Consensus 403 ~m~~~~g~~pd~~t~i~~l~-~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k 481 (902)
.... .....+...+..... +.|+++.|...|..|.....-.+. -.|-.-..+..
T Consensus 277 ~~~~-~~~~~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r------------------------~~YW~~ra~~~ 331 (618)
T 1qsa_A 277 DAIM-RSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDE------------------------WRYWQADLLLE 331 (618)
T ss_dssp HHHH-TCCCHHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHH------------------------HHHHHHHHHHH
T ss_pred hccc-cCCChHHHHHHHHHHHHCCCHHHHHHHHHHccccccccHh------------------------HHHHHHHHHHH
Q ss_pred cCChHHHHHHHHHH
Q psy767 482 KGQIDAAYRIVNTL 495 (902)
Q Consensus 482 ~g~~~~A~~l~~~m 495 (902)
.|+.++|..+|..+
T Consensus 332 ~g~~~~a~~~~~~~ 345 (618)
T 1qsa_A 332 RGREAEAKEILHQL 345 (618)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
No 346
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=46.56 E-value=3 Score=44.02 Aligned_cols=25 Identities=40% Similarity=0.769 Sum_probs=23.4
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+.+++++||||..-
T Consensus 289 ~~L~~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 289 KCLHIDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp HHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred HHhccCcccCCCHHHHhcCchhccC
Confidence 8999999999999999999999654
No 347
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=46.42 E-value=5 Score=41.80 Aligned_cols=24 Identities=29% Similarity=0.423 Sum_probs=22.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||+.||.+|.+.+++++||||..
T Consensus 287 ~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 287 MMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp HHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred HHcCCChhhCcCHHHHHhCccccC
Confidence 789999999999999999999963
No 348
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=46.36 E-value=2.4 Score=43.29 Aligned_cols=27 Identities=33% Similarity=0.448 Sum_probs=23.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||.+...
T Consensus 244 ~~l~~dp~~R~s~~~~l~h~~~~~~~~ 270 (277)
T 3f3z_A 244 RLLTKSPKQRITSLQALEHEWFEKQLS 270 (277)
T ss_dssp HHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred HHccCChhhCcCHHHHhcCHHHhcccc
Confidence 689999999999999999999976443
No 349
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=46.27 E-value=5 Score=41.95 Aligned_cols=25 Identities=32% Similarity=0.656 Sum_probs=23.0
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+.+++++||||.+.
T Consensus 257 ~~l~~dP~~Rps~~~~l~h~~~~~~ 281 (322)
T 2ycf_A 257 KLLVVDPKARFTTEEALRHPWLQDE 281 (322)
T ss_dssp HHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred HHcccCHhhCCCHHHHhhCcCcCCH
Confidence 7899999999999999999999654
No 350
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=45.85 E-value=6.1 Score=40.55 Aligned_cols=25 Identities=24% Similarity=0.308 Sum_probs=23.2
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+.+++++||||...
T Consensus 266 ~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 266 LLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred HHHhcCcccCcCHHHHhCCCCcCCC
Confidence 7999999999999999999999653
No 351
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=45.68 E-value=4.7 Score=43.20 Aligned_cols=23 Identities=43% Similarity=0.834 Sum_probs=21.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCcc
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFN 873 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~ 873 (902)
+||+.||.+|.+++++++||||.
T Consensus 342 ~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 342 RLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp HHSCSSTTTSCCHHHHHHSGGGC
T ss_pred HHcCCChhHCcCHHHHhcCcccC
Confidence 78999999999999999999996
No 352
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=45.65 E-value=3.4 Score=42.65 Aligned_cols=23 Identities=35% Similarity=0.612 Sum_probs=21.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCcc
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFN 873 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~ 873 (902)
+||+.||.+|.+++++++||||.
T Consensus 275 ~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 275 RMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHhhcChhhCCCHHHHhcCcccc
Confidence 89999999999999999999985
No 353
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=45.55 E-value=3.7 Score=41.91 Aligned_cols=29 Identities=24% Similarity=0.337 Sum_probs=25.4
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||.+.+...
T Consensus 244 ~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 272 (284)
T 3kk8_A 244 SMLTVNPKKRITADQALKVPWICNRERVA 272 (284)
T ss_dssp HHSCSSTTTSCCHHHHTTSHHHHSCCCGG
T ss_pred HHcccChhhCCCHHHHhcCccccCChhHH
Confidence 69999999999999999999997765443
No 354
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=45.12 E-value=3.4 Score=43.01 Aligned_cols=31 Identities=32% Similarity=0.430 Sum_probs=27.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCCc
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVPD 881 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (902)
+||+.||.+|.+.+++++||||.+.......
T Consensus 261 ~~l~~dp~~Rpt~~~ll~~~~~~~~~~~~~~ 291 (314)
T 3com_A 261 QCLVKSPEQRATATQLLQHPFVRSAKGVSIL 291 (314)
T ss_dssp HHTCSCTTTSCCHHHHTTSHHHHTCCCGGGG
T ss_pred HHccCChhhCcCHHHHHhCHHHhcCCcchHH
Confidence 7999999999999999999999887766553
No 355
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=45.02 E-value=43 Score=32.42 Aligned_cols=63 Identities=17% Similarity=0.116 Sum_probs=37.8
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHccCCCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCCCCh
Q psy767 475 HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRA 542 (902)
Q Consensus 475 li~~~~k~g~~~~A~~l~~~m~~~~~~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~g~~Pd~ 542 (902)
.+...++.|+.+....+++.+...+......-....+.+...+..|. . ++++.+.+.|..|+.
T Consensus 12 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~----~~v~~Ll~~g~~~~~ 74 (241)
T 1k1a_A 12 PLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTL-P----SVVRLLVTAGASPMA 74 (241)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC-H----HHHHHHHHTTCCTTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCC-H----HHHHHHHHcCCCccc
Confidence 45556778999988888887766542221111123345556667777 3 455666677776654
No 356
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=44.31 E-value=3.1 Score=43.18 Aligned_cols=27 Identities=37% Similarity=0.854 Sum_probs=24.4
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+++++++||||.+...
T Consensus 244 ~~l~~dp~~Rps~~~~l~h~~~~~~~~ 270 (304)
T 2jam_A 244 HLLEKDPNERYTCEKALSHPWIDGNTA 270 (304)
T ss_dssp HHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred HHcCCChhHCcCHHHHhcCccccCCCc
Confidence 789999999999999999999987554
No 357
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=44.17 E-value=6.1 Score=41.50 Aligned_cols=26 Identities=19% Similarity=0.493 Sum_probs=22.8
Q ss_pred CCCCCCcchhh-----hHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRW-----SCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|. +.+++++||||.++.
T Consensus 254 ~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~ 284 (327)
T 3a62_A 254 KLLKRNAASRLGAGPGDAGEVQAHPFFRHIN 284 (327)
T ss_dssp HHSCSCGGGSTTSSTTTHHHHHHSGGGSSCC
T ss_pred HHHhcCHhhccCCCCCCHHHHHcCCcccCCC
Confidence 67888999998 889999999998764
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=43.78 E-value=3e+02 Score=34.12 Aligned_cols=53 Identities=13% Similarity=0.084 Sum_probs=35.1
Q ss_pred HHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHHHHHHH--HHcCCHHHHHHHHHHHHh
Q psy767 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHL--INKGQIDAAYRIVNTLAR 439 (902)
Q Consensus 382 ~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t~i~~l--~~~g~~~~A~~~~~~m~~ 439 (902)
..++..+...+.++.+.++...... +|- .+++.+. ...|++++|...|++...
T Consensus 816 ~~l~~~l~~~~~~~~~~~l~~~~~~----~~~-~~yl~g~~~L~~ge~~~A~~~F~kaa~ 870 (1139)
T 4fhn_B 816 TELVEKLFLFKQYNACMQLIGWLNS----DPI-AVYLKALIYLKSKEAVKAVRCFKTTSL 870 (1139)
T ss_dssp HHHHHHHHHHSCTTHHHHHHHHSCC----CHH-HHHHHHHHHHHTTCHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhhhHHHHHHHhhhccC----CcH-HHHHHHHHHHhcCCHHHHHHHHHHHhh
Confidence 3566677788888877776655543 221 2465554 488999999999976543
No 359
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=43.63 E-value=3.1 Score=42.70 Aligned_cols=27 Identities=30% Similarity=0.471 Sum_probs=24.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||..+..
T Consensus 259 ~~l~~dp~~Rps~~ell~hp~~~~~~~ 285 (287)
T 2wei_A 259 KMLTFHPSLRITATQCLEHPWIQKYSS 285 (287)
T ss_dssp HHTCSSGGGSCCHHHHHHSHHHHHHCC
T ss_pred HHcccChhhCcCHHHHhcCHHHhcccc
Confidence 789999999999999999999976654
No 360
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=43.34 E-value=4.2 Score=41.66 Aligned_cols=26 Identities=31% Similarity=0.622 Sum_probs=23.6
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+.+++++||||....
T Consensus 249 ~~l~~~p~~Rpt~~e~l~hp~f~~~~ 274 (290)
T 3fme_A 249 QCLKKNSKERPTYPELMQHPFFTLHE 274 (290)
T ss_dssp HHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred HHhhcChhhCcCHHHHHhCcccccCc
Confidence 79999999999999999999997543
No 361
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=42.80 E-value=3e+02 Score=28.30 Aligned_cols=85 Identities=7% Similarity=-0.014 Sum_probs=48.6
Q ss_pred HHHcCCHHHHHH----HHHHhhhCCCCCCHHHHHHHHHHHHhCCCHH-HHHHHHHHHH----HCC--CCCCHHHHHHHHH
Q psy767 134 YCQDGNIEGATK----ILEFMRDKTFPISEGVFNALIYGHSQANDMA-SAEGILTMMS----QAG--LEPSAQTYTKLMC 202 (902)
Q Consensus 134 ~~~~g~~~~A~~----l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~-~A~~l~~~M~----~~g--~~pd~~ty~~ll~ 202 (902)
+.+.|+...|-. +.+...+.+++++.....-++..+......+ .=.++.+.+. +.| -.-|...+..+-.
T Consensus 63 ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~ 142 (312)
T 2wpv_A 63 FLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGS 142 (312)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHH
T ss_pred HHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHH
Confidence 344566554443 3555566777778777777777666543211 1233333333 222 1235666777777
Q ss_pred HHHHcCChhHHHHHHH
Q psy767 203 GYAKHGDMDSIKTKIP 218 (902)
Q Consensus 203 a~~~~g~~~~a~~l~~ 218 (902)
.|.+.+++.+|...|-
T Consensus 143 ~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 143 KLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHTTCHHHHHHHHH
T ss_pred HHhhcCCHHHHHHHHH
Confidence 7888888877776554
No 362
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=42.79 E-value=3.9 Score=41.86 Aligned_cols=26 Identities=19% Similarity=0.427 Sum_probs=23.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+++++++||||....
T Consensus 245 ~~l~~~p~~Rps~~~ll~h~~~~~~~ 270 (284)
T 2vgo_A 245 KLLRYHPPQRLPLKGVMEHPWVKANS 270 (284)
T ss_dssp HHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred HHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence 68999999999999999999997543
No 363
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=42.53 E-value=1.5e+02 Score=29.64 Aligned_cols=65 Identities=17% Similarity=0.191 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhCCCCChHHHHHhhhccCCCCCCChHHHHHHHHhcCCCCccchHHHHHHHHHhcCHHHHHHHHH
Q psy767 624 LRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSVGVTIGSITSAYVVHMLRQHNLKEAALLAK 697 (902)
Q Consensus 624 l~ll~~m~~~~g~~P~~~t~~~lv~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~l~~~~~~g~~~~a~~~~~ 697 (902)
.++++-+ .+.|..|+.... .++... -.++++.+-+.|..+....+.--....+...+++.++--+
T Consensus 208 ~~~v~~L-l~~gad~~~~~~----~a~~~~----~~~iv~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~ii~~~~ 272 (285)
T 3kea_A 208 IEMLQAL-FKYDINIYSANL----ENVLLD----DAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLDEIISKNK 272 (285)
T ss_dssp HHHHHHH-TTSCBCSTTTTG----GGGTTT----CHHHHHHHHHHHHHHTTCTTTTTCHHHHTCSHHHHHHHCH
T ss_pred HHHHHHH-HHcCCCCCCCCh----hhhhcC----CHHHHHHHHHcCCCCCCccccchHHHHhhhhHHHHHhcCc
Confidence 4455555 667777776542 122222 2257777777776666654444445556666666555433
No 364
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=42.21 E-value=3.8 Score=41.78 Aligned_cols=29 Identities=24% Similarity=0.402 Sum_probs=25.1
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||.+.....
T Consensus 240 ~~l~~~p~~Rps~~e~l~h~~~~~~~~~~ 268 (279)
T 3fdn_A 240 RLLKHNPSQRPMLREVLEHPWITANSSKP 268 (279)
T ss_dssp HHCCSSGGGSCCHHHHHHCHHHHHHCSSC
T ss_pred HHhccChhhCCCHHHHhhCccccCCccCc
Confidence 78999999999999999999997755443
No 365
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=41.76 E-value=7 Score=41.35 Aligned_cols=26 Identities=27% Similarity=0.534 Sum_probs=22.5
Q ss_pred CCCCCCcchhh-----hHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRW-----SCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|+ +.+++++||||.++.
T Consensus 238 ~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~ 268 (337)
T 1o6l_A 238 GLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268 (337)
T ss_dssp HHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred HHhhcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence 57888999998 899999999998763
No 366
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=41.32 E-value=2.8 Score=45.19 Aligned_cols=27 Identities=15% Similarity=0.009 Sum_probs=24.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||..++.
T Consensus 342 ~~L~~dp~~Rpt~~e~l~hp~f~~~~~ 368 (377)
T 3byv_A 342 GFLRYPKEDRLLPLQAMETPEYEQLRT 368 (377)
T ss_dssp HHTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred HHcCCCchhCCCHHHHhhChHHHHHHH
Confidence 799999999999999999999987654
No 367
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=40.60 E-value=4.7 Score=43.15 Aligned_cols=24 Identities=29% Similarity=0.447 Sum_probs=22.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||+.||.+|.+.+++++||||..
T Consensus 257 ~~L~~dP~~Rps~~ell~hp~f~~ 280 (361)
T 3uc3_A 257 RIFVADPATRISIPEIKTHSWFLK 280 (361)
T ss_dssp HHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred HHccCChhHCcCHHHHHhCcchhc
Confidence 799999999999999999999943
No 368
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=40.40 E-value=7.7 Score=40.93 Aligned_cols=25 Identities=24% Similarity=0.375 Sum_probs=23.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+.+++++||||...
T Consensus 257 ~~L~~dP~~Rps~~ell~hp~~~~~ 281 (335)
T 3dls_A 257 GLLQPVPERRTTLEKLVTDPWVTQP 281 (335)
T ss_dssp HHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred HHccCChhhCcCHHHHhcCccccCC
Confidence 7999999999999999999999763
No 369
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=39.75 E-value=2.1e+02 Score=27.15 Aligned_cols=49 Identities=14% Similarity=0.156 Sum_probs=21.8
Q ss_pred HHHHHHcCChHHHHHHHHHcccCCCCCCC-----HHHHHHHHHHcCCHHHHHHHH
Q psy767 385 IHALAVSGHGEYIDEIISKIQPGVGYSAD-----AANHIYHLINKGQIDAAYRIV 434 (902)
Q Consensus 385 i~~~~~~g~~~~A~~l~~~m~~~~g~~pd-----~~t~i~~l~~~g~~~~A~~~~ 434 (902)
+...+..|+.+.+..+++.+.+ .|..++ ..|.+...+..|+.+-...++
T Consensus 13 L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 66 (241)
T 1k1a_A 13 LHIAVVQGNLPAVHRLVNLFQQ-GGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 66 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHh-cCCCCCcccccCCCHHHHHHHcCCHHHHHHHH
Confidence 3344455666555555554332 222222 223444445566655443333
No 370
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=39.73 E-value=79 Score=29.18 Aligned_cols=28 Identities=11% Similarity=-0.047 Sum_probs=22.1
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHccC
Q psy767 473 ANHIYHLINKGQIDAAYRIVNTLARSAN 500 (902)
Q Consensus 473 ~~li~~~~k~g~~~~A~~l~~~m~~~~~ 500 (902)
|.+-.+|.+.+++++|+.+++.++.+..
T Consensus 126 ykia~C~~~l~~~~~Ai~~Le~Ip~k~R 153 (167)
T 3ffl_A 126 YKLAECYTVLKQDKDAIAILDGIPSRQR 153 (167)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSCGGGC
T ss_pred HHHHHHHHHHCCHHHHHHHHhcCCchhc
Confidence 4456668899999999999988877653
No 371
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=39.65 E-value=1.9e+02 Score=29.03 Aligned_cols=70 Identities=14% Similarity=0.126 Sum_probs=54.4
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCH----HHHHHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA----QTYTKLMCG 203 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~----~ty~~ll~a 203 (902)
+....+.|++++|++....-.+.. |-|...-..|+..+|-.|++++|.+-++...+. .|+. .+|..+|.+
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~~-P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l--~p~~~~~a~~yr~lI~a 77 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKAS-PKDASLRSSFIELLCIDGDFERADEQLMQSIKL--FPEYLPGASQLRHLVKA 77 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CGGGHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhC-CcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--CchhhHHHHHHHHHHHH
Confidence 344578899999999888877775 778888899999999999999999999888775 3443 345555543
No 372
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=39.57 E-value=4.2 Score=43.34 Aligned_cols=30 Identities=30% Similarity=0.443 Sum_probs=25.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+.+++++||||.+...+..
T Consensus 307 ~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~ 336 (360)
T 3eqc_A 307 KCLIKNPAERADLKQLMVHAFIKRSDAEEV 336 (360)
T ss_dssp HHHCSSTTTSCCHHHHHTSHHHHHHHHSCC
T ss_pred HHhhcChhhCCCHHHHhhChHhhcchHhhh
Confidence 899999999999999999999976554443
No 373
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=39.48 E-value=3.5e+02 Score=28.11 Aligned_cols=194 Identities=14% Similarity=0.123 Sum_probs=100.3
Q ss_pred CHHHHHHHHHHHHHCCCC---CC-HHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHHHHHHHHHhcCCHHHHH
Q psy767 174 DMASAEGILTMMSQAGLE---PS-AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249 (902)
Q Consensus 174 ~~~~A~~l~~~M~~~g~~---pd-~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~ 249 (902)
++++.+.=+++-.+.|-- -. ..+|.++..-|.+.+++++|.+++-.- ...+.+.|+...|-
T Consensus 11 ~~~~~i~rl~~~I~~G~y~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~G---------------A~~ll~~~Q~~sg~ 75 (336)
T 3lpz_A 11 KIERIIARLQRRIAEGQPEEQYEAAQETRLVAARYSKQGNWAAAVDILASV---------------SQTLLRSGQGGSGG 75 (336)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH---------------HHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHH---------------HHHHHHCCCcchHH
Confidence 344444444444444411 11 125666677777888888877765432 22333445554444
Q ss_pred HH----HHHHHHCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHh
Q psy767 250 GI----LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325 (902)
Q Consensus 250 ~l----~~~m~~~g~~pd~~ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~ 325 (902)
++ ++-+.+.++++|......|+..+.....-+ |...+ ++
T Consensus 76 DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~~~---------------p~r~~----------------------fi 118 (336)
T 3lpz_A 76 DLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQPGE---------------PVRKR----------------------FV 118 (336)
T ss_dssp HHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCTTC---------------HHHHH----------------------HH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCCC---------------cHHHH----------------------HH
Confidence 43 355556677777665555555444332110 11111 11
Q ss_pred hhhhcccccchHHhcC--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCChHHHHHHHHH
Q psy767 326 NICFHWLEGPMMSQAG--LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISK 403 (902)
Q Consensus 326 ~~~~~~~~~~~m~~~g--~~p~~~t~~~Li~~y~~~g~~~~A~~~~~~m~~~~~~~~~~~li~~~~~~g~~~~A~~l~~~ 403 (902)
..+..| -.+.| -.-+......+-..|.+.+++.+|...|- ....+....|..|+.-+...+..
T Consensus 119 ~~ai~W-----S~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~i-lg~~~s~~~~a~mL~ew~~~~~~--------- 183 (336)
T 3lpz_A 119 KEMIDW-----SKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHLV-LGTKESPEVLARMEYEWYKQDES--------- 183 (336)
T ss_dssp HHHHHH-----HHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHT-TSCTTHHHHHHHHHHHHHHTSCG---------
T ss_pred HHHHHH-----HhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHHH-hcCCchHHHHHHHHHHHHHhcCC---------
Confidence 111112 11222 23366777788899999999999998883 22221113354444333332211
Q ss_pred cccCCCCCCCHHH--HHHHHHHcCCHHHHHHHHHHHHhc
Q psy767 404 IQPGVGYSADAAN--HIYHLINKGQIDAAYRIVNTLARS 440 (902)
Q Consensus 404 m~~~~g~~pd~~t--~i~~l~~~g~~~~A~~~~~~m~~~ 440 (902)
..+|.+. .+..|.-.+++..|..+++...+.
T Consensus 184 ------~e~dlfiaRaVL~yL~l~n~~~A~~~~~~f~~~ 216 (336)
T 3lpz_A 184 ------HTAPLYCARAVLPYLLVANVRAANTAYRIFTSA 216 (336)
T ss_dssp ------GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ------ccHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 1122221 345567888999999988777654
No 374
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=39.35 E-value=4.8 Score=41.59 Aligned_cols=28 Identities=18% Similarity=0.374 Sum_probs=24.8
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFE 878 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (902)
+||+.||.+|.+.+++++||||.+-...
T Consensus 239 ~~l~~dP~~Rps~~e~l~hp~~~~~~~~ 266 (299)
T 3m2w_A 239 NLLKTEPTQRMTITEFMNHPWIMQSTKV 266 (299)
T ss_dssp HHTCSSTTTSCCHHHHHTSHHHHTGGGS
T ss_pred HHcccChhhCCCHHHHhcChhhcccccC
Confidence 8999999999999999999999765443
No 375
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=38.98 E-value=1.1e+02 Score=33.27 Aligned_cols=62 Identities=15% Similarity=-0.001 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHcCChhHHHHHHHhcc
Q psy767 160 GVFNALIYGHSQANDMASAEGILTMMSQAGLEP--SAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221 (902)
Q Consensus 160 ~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~p--d~~ty~~ll~a~~~~g~~~~a~~l~~~~~ 221 (902)
.++..+...|.+.|+++.|.+.|.++...-..+ -...+-.+++.+...+++..+...+.+..
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~ 195 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVN 195 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 356778888999999999999999987653222 34567778888888889888887777654
No 376
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=38.88 E-value=5 Score=42.42 Aligned_cols=26 Identities=31% Similarity=0.563 Sum_probs=23.8
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+.+++++||||....
T Consensus 270 ~~L~~dP~~Rpt~~ell~hp~~~~~~ 295 (336)
T 3fhr_A 270 LLLKTDPTERLTITQFMNHPWINQSM 295 (336)
T ss_dssp HHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred HHCCCChhHCcCHHHHhcCccccccc
Confidence 89999999999999999999997643
No 377
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=38.62 E-value=9.2 Score=39.09 Aligned_cols=26 Identities=23% Similarity=0.524 Sum_probs=22.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+|++.||-+|.+.+++++||||....
T Consensus 261 ~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 261 KCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHccCChhhCCCHHHHhcChhhhhcc
Confidence 89999999999999999999997654
No 378
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=38.41 E-value=10 Score=39.99 Aligned_cols=28 Identities=32% Similarity=0.481 Sum_probs=23.9
Q ss_pred CCCCCCcchhhhHHHh-------------hcCCCccCCCCC
Q psy767 851 RCLDKDPLRRWSCDQL-------------LRHPYFNGYYFE 878 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 878 (902)
+||..||.+|.+++++ ++|||+..++++
T Consensus 292 ~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~P 332 (336)
T 4g3f_A 292 EGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEP 332 (336)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCC
T ss_pred HHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCC
Confidence 7999999999999987 679999877654
No 379
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=38.26 E-value=9 Score=40.76 Aligned_cols=26 Identities=35% Similarity=0.592 Sum_probs=24.0
Q ss_pred CCCCCCcchhh-----hHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRW-----SCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|. +.+++++||||..+.
T Consensus 299 ~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~ 329 (355)
T 1vzo_A 299 RLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 329 (355)
T ss_dssp HHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred HHhhhCHHHhcCCCCCCHHHHHcCcchhcCC
Confidence 89999999999 999999999998764
No 380
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=37.80 E-value=6.5 Score=41.76 Aligned_cols=26 Identities=19% Similarity=0.492 Sum_probs=23.3
Q ss_pred CCCCCCcchhhhHH-HhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCD-QLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~-~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+++ ++++||||.++.
T Consensus 251 ~lL~~dp~~R~~~~~~i~~hp~f~~~~ 277 (345)
T 1xjd_A 251 KLFVREPEKRLGVRGDIRQHPLFREIN 277 (345)
T ss_dssp HHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred HHhcCCHhHcCCChHHHHcCccccCCC
Confidence 78899999999998 999999998764
No 381
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=37.74 E-value=92 Score=27.66 Aligned_cols=63 Identities=14% Similarity=0.217 Sum_probs=49.3
Q ss_pred chHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHH
Q psy767 99 TFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168 (902)
Q Consensus 99 ~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~ 168 (902)
.-+..+-++.+....+.|+..+..+. +.+|-|.+|+..|.++|+-.+.+- .+....|..+++-
T Consensus 69 ~wElrrglN~l~~~DlVPeP~Ii~AA------LrAcRRvNDfalAVR~lE~vK~K~-~~~~~iY~y~lqE 131 (152)
T 2y69_E 69 AWELRKGMNTLVGYDLVPEPKIIDAA------LRACRRLNDFASAVRILEVVKDKA-GPHKEIYPYVIQE 131 (152)
T ss_dssp HHHHHHHHHHHTTSSBCCCHHHHHHH------HHHHHHTTCHHHHHHHHHHHHHHT-TTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCCCcHHHHHH------HHHHHHhhhHHHHHHHHHHHHHhc-CCchhhHHHHHHH
Confidence 33555666666666789999999999 999999999999999999987664 3445678777653
No 382
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=37.58 E-value=2.5e+02 Score=30.36 Aligned_cols=55 Identities=20% Similarity=0.058 Sum_probs=23.6
Q ss_pred HHHHHHcCCHHHHHHHHHHhhhCCC--CCCHHHHHHHHHHHHhCCCHHHHHHHHHHH
Q psy767 131 ISKYCQDGNIEGATKILEFMRDKTF--PISEGVFNALIYGHSQANDMASAEGILTMM 185 (902)
Q Consensus 131 i~~~~~~g~~~~A~~l~~~m~~~~~--~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M 185 (902)
...|.+.|+++.|.++|.++..... .--...|-.+|+.+...+++..|...+...
T Consensus 138 a~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka 194 (429)
T 4b4t_R 138 GEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAV 194 (429)
T ss_dssp HHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 4444444444444444444443211 111233444444444444444444444443
No 383
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=37.23 E-value=4.9 Score=42.27 Aligned_cols=27 Identities=19% Similarity=0.170 Sum_probs=24.1
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||.+-..
T Consensus 253 ~~L~~dP~~Rpt~~ell~h~w~~~~~~ 279 (325)
T 3kn6_A 253 GLLTVDPNKRLKMSGLRYNEWLQDGSQ 279 (325)
T ss_dssp HHHCCCTTTCCCTTTSTTCGGGCTTCC
T ss_pred HHCCCChhHCCCHHHHhcChhhccCcc
Confidence 789999999999999999999976543
No 384
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=37.09 E-value=8.6 Score=40.23 Aligned_cols=26 Identities=23% Similarity=0.520 Sum_probs=21.3
Q ss_pred CCCCCCcchhh-----hHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRW-----SCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 876 (902)
+||..||.+|. +.+++++||||.++.
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~ 266 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKNHPWFKEVV 266 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred HHhccCHHHcCCCcCCCHHHHhcCccccCCC
Confidence 56777888888 889999999998753
No 385
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=36.57 E-value=5.6 Score=44.59 Aligned_cols=30 Identities=33% Similarity=0.548 Sum_probs=26.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEVP 880 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (902)
+||+.||.+|.+++++++||||.......+
T Consensus 259 ~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~ 288 (486)
T 3mwu_A 259 KMLTFHPSLRITATQCLEHPWIQKYSSETP 288 (486)
T ss_dssp HHTCSSTTTSCCHHHHHHCHHHHHTCCCCC
T ss_pred HHcCCChhhCcCHHHHhcCHhhccCcccCc
Confidence 789999999999999999999988766554
No 386
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=36.52 E-value=8.7 Score=42.45 Aligned_cols=25 Identities=24% Similarity=0.565 Sum_probs=23.0
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+.+++++||||...
T Consensus 250 ~~L~~dP~~Rpta~e~L~hp~~~~~ 274 (444)
T 3soa_A 250 KMLTINPSKRITAAEALKHPWISHR 274 (444)
T ss_dssp HHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred HHcCCChhHCCCHHHHhcCccccCC
Confidence 7899999999999999999999653
No 387
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=36.51 E-value=5.9 Score=42.14 Aligned_cols=25 Identities=36% Similarity=0.575 Sum_probs=22.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+.+++++||||...
T Consensus 243 ~~L~~dP~~Rps~~eil~hp~~~~~ 267 (347)
T 3zgw_A 243 QMLQVDPKKRISMKNLLNHPWIMQD 267 (347)
T ss_dssp HHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred HHcccCHhHCcCHHHHhcCcchhcC
Confidence 7899999999999999999999653
No 388
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=35.68 E-value=1.7e+02 Score=30.06 Aligned_cols=55 Identities=5% Similarity=0.009 Sum_probs=33.2
Q ss_pred hhhHHHHHHHHHHhccccccccchHHHHhhhhhh--------hh-HHHHHHHhhhhcCCCcccc
Q psy767 781 VVSHLEQLLNAFVEHAIPISAFSSDYIQNGLGSA--------LT-SDISKALGALTSDDLMPQP 835 (902)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~l~~~~~~~l~~~~ 835 (902)
..+.+-+||+.|.+.|+.=++...+++...++.- .. +-+.+.+.+.-..+++|..
T Consensus 217 ~re~~~~LL~~L~~~~~ls~~q~~~Gf~~vl~~l~Dl~lDiP~A~~~la~~v~~ai~~g~l~~~ 280 (307)
T 2zu6_B 217 TFKMILDLLKSLWKSSTITVDQMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQ 280 (307)
T ss_dssp HHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHTSSCHH
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhccHhhcccccHHHHHHHHHHHHHHCCCCCHH
Confidence 3567788888888888776666666666665321 11 1145555555555666654
No 389
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=35.49 E-value=6.4 Score=41.66 Aligned_cols=25 Identities=44% Similarity=0.755 Sum_probs=23.0
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+.+++++||||..-
T Consensus 256 ~~L~~dp~~Rpt~~e~l~hp~~~~~ 280 (343)
T 3dbq_A 256 CCLKRDPKQRISIPELLAHPYVQIQ 280 (343)
T ss_dssp HHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred HHcCCChhHCCCHHHHHhCcccccc
Confidence 7999999999999999999999643
No 390
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=35.47 E-value=6.1 Score=42.04 Aligned_cols=25 Identities=32% Similarity=0.514 Sum_probs=23.1
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+.+++++||||...
T Consensus 269 ~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 269 RMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp HHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred HHCCCChhHCcCHHHHhcChhhcCC
Confidence 7899999999999999999999764
No 391
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=35.28 E-value=6 Score=40.08 Aligned_cols=24 Identities=29% Similarity=0.587 Sum_probs=22.2
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||+.||.+|.+.+++++||||..
T Consensus 244 ~~l~~~p~~Rps~~~~l~h~~~~~ 267 (276)
T 2h6d_A 244 HMLQVDPLKRATIKDIREHEWFKQ 267 (276)
T ss_dssp HHTCSSGGGSCCHHHHHHSHHHHT
T ss_pred HHccCChhhCCCHHHHHhChhhcc
Confidence 788999999999999999999954
No 392
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=35.26 E-value=2e+02 Score=26.57 Aligned_cols=97 Identities=7% Similarity=-0.084 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHhccC-CCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhhhhhcccccchHHhcCCC
Q psy767 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSS-LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343 (902)
Q Consensus 265 ~ty~~LI~a~~~~g~~~~A~~lf~~m~~~-~~~p~~~tl~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~m~~~g~~ 343 (902)
.++..+.+++...|++..|...|++.... ...+...+....+. .... .-......
T Consensus 64 ~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~--~~ss----------------------~p~s~~~~ 119 (167)
T 3ffl_A 64 QLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTG--NSAS----------------------TPQSQCLP 119 (167)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------------------------------CCC
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCcccccc--ccCC----------------------Cccccccc
Confidence 35566778999999999999999984211 00000000000000 0000 00001122
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHcCCCCCcccHHHHH
Q psy767 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII 385 (902)
Q Consensus 344 p~~~t~~~Li~~y~~~g~~~~A~~~~~~m~~~~~~~~~~~li 385 (902)
.+...---+-.+|.+.|++++|+.+++.+....-.+..|.++
T Consensus 120 ~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k~Rt~kvnm~L 161 (167)
T 3ffl_A 120 SEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQRTPKINMLL 161 (167)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGGGCCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHCCHHHHHHHHhcCCchhcCHHHHHHH
Confidence 334444557778888899999999888876655555555444
No 393
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=34.81 E-value=9 Score=40.81 Aligned_cols=26 Identities=19% Similarity=0.310 Sum_probs=21.7
Q ss_pred CCCCCCcchhhh-----HHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWS-----CDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|+. .+++++||||.++.
T Consensus 254 ~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~ 284 (353)
T 2i0e_A 254 GLMTKHPGKRLGCGPEGERDIKEHAFFRYID 284 (353)
T ss_dssp HHTCSCTTSCTTCSTTHHHHHHTSGGGTTCC
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcCccccCCC
Confidence 578888889985 49999999998763
No 394
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=34.72 E-value=6.6 Score=41.64 Aligned_cols=25 Identities=32% Similarity=0.670 Sum_probs=22.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||-+|.+++++++||||.+.
T Consensus 260 ~~L~~dP~~R~t~~~il~hp~~~~~ 284 (342)
T 2qr7_A 260 KMLHVDPHQRLTAALVLRHPWIVHW 284 (342)
T ss_dssp HHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred HHCCCChhHCcCHHHHhcCCeecCc
Confidence 7999999999999999999999553
No 395
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=34.34 E-value=10 Score=39.66 Aligned_cols=26 Identities=35% Similarity=0.551 Sum_probs=23.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+.+++++||||....
T Consensus 277 ~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 277 RMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp HHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred HHccCChhhCcCHHHHhcChhhccCC
Confidence 78999999999999999999997544
No 396
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=33.89 E-value=12 Score=38.27 Aligned_cols=29 Identities=28% Similarity=0.539 Sum_probs=24.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||.+-....
T Consensus 248 ~~l~~~p~~Rps~~~ll~~~~~~~~~~~~ 276 (294)
T 2rku_A 248 KMLQTDPTARPTINELLNDEFFTSGYIPA 276 (294)
T ss_dssp HHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred HHcccChhhCcCHHHHhhChheecCCcCC
Confidence 68899999999999999999997655433
No 397
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=32.60 E-value=11 Score=41.05 Aligned_cols=25 Identities=20% Similarity=0.513 Sum_probs=23.2
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+.+++++||||...
T Consensus 304 ~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 304 NLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp TTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred HHCCCChhHCcCHHHHhcCccccCC
Confidence 8999999999999999999999653
No 398
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=32.56 E-value=12 Score=40.38 Aligned_cols=26 Identities=27% Similarity=0.567 Sum_probs=22.7
Q ss_pred CCCCCCcchhhh-HHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWS-CDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~-~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|++ .+++++||||.++.
T Consensus 253 ~lL~~dP~~R~s~~~~l~~hp~f~~~~ 279 (384)
T 4fr4_A 253 KLLEPNPDQRFSQLSDVQNFPYMNDIN 279 (384)
T ss_dssp HHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred HHhcCCHhHhcccHHHHHcChhhhcCC
Confidence 678899999998 89999999998763
No 399
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=32.51 E-value=12 Score=41.23 Aligned_cols=24 Identities=42% Similarity=0.747 Sum_probs=22.4
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||+.||.+|.+.+++++||||.+
T Consensus 278 ~~L~~dP~~Rps~~eil~hp~f~~ 301 (434)
T 2rio_A 278 QMIDHDPLKRPTAMKVLRHPLFWP 301 (434)
T ss_dssp HHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred HHhhCChhhCCCHHHHHhCCccCC
Confidence 789999999999999999999964
No 400
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=32.33 E-value=8.1 Score=43.15 Aligned_cols=27 Identities=26% Similarity=0.324 Sum_probs=24.6
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+++++++||||.++..
T Consensus 264 ~~L~~dp~~R~s~~e~l~h~~~~~~~~ 290 (484)
T 3nyv_A 264 KMLTYVPSMRISARDALDHEWIQTYTK 290 (484)
T ss_dssp HHTCSSGGGSCCHHHHHTSHHHHHHTC
T ss_pred HHCCCChhHCcCHHHHhhChhhccccc
Confidence 799999999999999999999976654
No 401
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=32.26 E-value=11 Score=39.92 Aligned_cols=26 Identities=19% Similarity=0.373 Sum_probs=22.4
Q ss_pred CCCCCCcchhhh-----HHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWS-----CDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+ .+++++||||.++.
T Consensus 271 ~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~ 301 (350)
T 1rdq_E 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred HHhhcCHHhccCCccCCHHHHHhCcCcCCCC
Confidence 678889999988 89999999998753
No 402
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=32.23 E-value=8 Score=40.68 Aligned_cols=29 Identities=28% Similarity=0.502 Sum_probs=24.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||.......
T Consensus 293 ~~l~~dp~~Rps~~ell~hp~f~~~~~~~ 321 (340)
T 3an0_A 293 QCLKKNSKERPTYPELMQHPFFTLHESKG 321 (340)
T ss_dssp HHTCSSGGGSCCHHHHTTSHHHHHHTTSC
T ss_pred HHccCCcccCcCHHHHhcCcCcccccccc
Confidence 78999999999999999999996554443
No 403
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=31.98 E-value=4.3e+02 Score=27.04 Aligned_cols=82 Identities=10% Similarity=0.088 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHcCCCCCcccHHHHHHHHHHc---CChHHHHHHHHHcccCCCCCCCHHHHHHHH
Q psy767 345 SAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVS---GHGEYIDEIISKIQPGVGYSADAANHIYHL 421 (902)
Q Consensus 345 ~~~t~~~Li~~y~~~g~~~~A~~~~~~m~~~~~~~~~~~li~~~~~~---g~~~~A~~l~~~m~~~~g~~pd~~t~i~~l 421 (902)
+......+-..|.+.|++.+|...|-- ....+...+..++.-+... |...++--.+-+ .+..|
T Consensus 133 dp~LH~~~a~~~~~e~~~~~A~~H~i~-~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~R-------------aVL~y 198 (312)
T 2wpv_A 133 DPYLHNTIGSKLLEGDFVYEAERYFML-GTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSR-------------LVFNY 198 (312)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHT-SCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH-------------HHHHH
T ss_pred CHHHHHHHHHHHhhcCCHHHHHHHHHh-CCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHH-------------HHHHH
Confidence 677888889999999999999998752 1100122244444333332 222221111111 23445
Q ss_pred HHcCCHHHHHHHHHHHHhc
Q psy767 422 INKGQIDAAYRIVNTLARS 440 (902)
Q Consensus 422 ~~~g~~~~A~~~~~~m~~~ 440 (902)
.-.|++..|..+|+...+.
T Consensus 199 L~l~n~~~A~~~~~~f~~~ 217 (312)
T 2wpv_A 199 LFISNISFAHESKDIFLER 217 (312)
T ss_dssp HHTTBHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHH
Confidence 6789999999999887765
No 404
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=30.84 E-value=8.4 Score=41.16 Aligned_cols=25 Identities=28% Similarity=0.493 Sum_probs=22.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+.+++++||||.+.
T Consensus 267 ~~L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 267 SMLTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp HHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred HHcCCChhhCcCHHHHhcCcccCCC
Confidence 6899999999999999999999654
No 405
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=30.70 E-value=8.5 Score=43.15 Aligned_cols=25 Identities=36% Similarity=0.551 Sum_probs=23.1
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGY 875 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (902)
+||+.||.+|.+++++++||||...
T Consensus 274 ~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 274 QMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp HHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred HHCCCChhhCccHHHHhcCcccccC
Confidence 7999999999999999999999654
No 406
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=30.44 E-value=4.3e+02 Score=26.56 Aligned_cols=125 Identities=11% Similarity=0.147 Sum_probs=62.8
Q ss_pred HHHHHHHHcCChHHHHHHHHHcccCC-CCCCCHHHHHHHHHHcCCHHHHHHHHHHHHhccCCCCCcccchhhHHHhhhhc
Q psy767 383 DIIHALAVSGHGEYIDEIISKIQPGV-GYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKT 461 (902)
Q Consensus 383 ~li~~~~~~g~~~~A~~l~~~m~~~~-g~~pd~~t~i~~l~~~g~~~~A~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~ 461 (902)
.-+...+..|+.+.+..++....... ....+..|.+...+..|+.+-+..+++. +.++...+
T Consensus 26 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-----g~~~~~~~------------ 88 (351)
T 3utm_A 26 DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQH-----GADVHAKD------------ 88 (351)
T ss_dssp HHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCC------------
T ss_pred hhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc-----CCCCCccC------------
Confidence 34555567888887777765422110 1112223566666788888766665542 23222111
Q ss_pred CCCCCccccchHHHHHHHHhcCChHHHHHHHHHHHHccC-CCCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHHCCCCC
Q psy767 462 NQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSAN-INGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHP 540 (902)
Q Consensus 462 ~~~~~g~~~~~~~li~~~~k~g~~~~A~~l~~~m~~~~~-~~~~~~~~~n~li~~~~~~g~~~~~A~~l~~~m~~~g~~P 540 (902)
..|. +.+..-+..|+.+-+.-+++ .+. ++..+. ...+.+...+..|. . ++++.+.+.|..|
T Consensus 89 ---~~g~-----t~L~~A~~~g~~~iv~~Ll~----~g~~~~~~~~-~g~t~L~~A~~~~~-~----~~v~~Ll~~g~~~ 150 (351)
T 3utm_A 89 ---KGGL-----VPLHNACSYGHYEVTELLLK----HGACVNAMDL-WQFTPLHEAASKNR-V----EVCSLLLSHGADP 150 (351)
T ss_dssp ---TTCC-----CHHHHHHHTTCHHHHHHHHH----TTCCTTCCCT-TCCCHHHHHHHTTC-H----HHHHHHHHTTCCT
T ss_pred ---CCCC-----cHHHHHHHCCCHHHHHHHHH----CCCCCCCCCC-CCCCHHHHHHHcCC-H----HHHHHHHHcCCCC
Confidence 1122 23444556777765554443 332 111111 12234555566777 3 4555566677776
Q ss_pred Ch
Q psy767 541 RA 542 (902)
Q Consensus 541 d~ 542 (902)
+.
T Consensus 151 ~~ 152 (351)
T 3utm_A 151 TL 152 (351)
T ss_dssp TC
T ss_pred cc
Confidence 64
No 407
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=30.44 E-value=2.5e+02 Score=26.44 Aligned_cols=84 Identities=14% Similarity=0.212 Sum_probs=44.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCCCCc--ccHHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHHHHHHHHHcCCHHH
Q psy767 352 LMCGYAKHGDMDSIRRLLAQNGSSLVN--GDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDA 429 (902)
Q Consensus 352 Li~~y~~~g~~~~A~~~~~~m~~~~~~--~~~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t~i~~l~~~g~~~~ 429 (902)
.+...++.|+++....++..-...... ..-.+.+...+..|+.+.+..+++.-........+..|.+...+..|+.+-
T Consensus 9 ~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 88 (231)
T 3aji_A 9 MICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEI 88 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHH
T ss_pred hHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHH
Confidence 356677789999999888763221111 112234445566777766665655422111111122345555667787765
Q ss_pred HHHHHH
Q psy767 430 AYRIVN 435 (902)
Q Consensus 430 A~~~~~ 435 (902)
+..+++
T Consensus 89 v~~Ll~ 94 (231)
T 3aji_A 89 VKALLV 94 (231)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 408
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=30.32 E-value=4.8 Score=42.21 Aligned_cols=29 Identities=34% Similarity=0.557 Sum_probs=25.8
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+|++.||.+|.+.+++++||||.......
T Consensus 268 ~~l~~dp~~Rps~~ell~hp~~~~~~~~~ 296 (327)
T 3aln_A 268 LCLTKDESKRPKYKELLKHPFILMYEERA 296 (327)
T ss_dssp HHTCSSGGGSCCHHHHTTSHHHHHHHHSC
T ss_pred HHhhCChhhCcCHHHHHhChHHHHhHhhH
Confidence 89999999999999999999997765443
No 409
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=29.67 E-value=8.4 Score=43.33 Aligned_cols=29 Identities=17% Similarity=0.272 Sum_probs=25.6
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||.......
T Consensus 284 ~~L~~dp~~R~t~~e~l~h~~~~~~~~~~ 312 (504)
T 3q5i_A 284 LMLTYDYNKRCTAEEALNSRWIKKYANNI 312 (504)
T ss_dssp HHTCSSTTTSCCHHHHHTSHHHHHTCCCC
T ss_pred HHcCCChhHCCCHHHHhcCHhhhhchhcc
Confidence 78999999999999999999998766543
No 410
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=29.58 E-value=11 Score=40.09 Aligned_cols=29 Identities=28% Similarity=0.369 Sum_probs=25.5
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||.+.+...
T Consensus 288 ~~l~~dP~~Rps~~~ll~h~~~~~~~~~~ 316 (348)
T 1u5q_A 288 SCLQKIPQDRPTSEVLLKHRFVLRERPPT 316 (348)
T ss_dssp HHTCSSGGGSCCHHHHTTCHHHHSCCCTT
T ss_pred HHcccChhhCcCHHHHhhChhhhccCCcc
Confidence 79999999999999999999997765443
No 411
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=29.39 E-value=15 Score=42.00 Aligned_cols=26 Identities=35% Similarity=0.547 Sum_probs=23.3
Q ss_pred CCCCCCcchhh-----hHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRW-----SCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|. +.+++++||||.++.
T Consensus 422 ~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~ 452 (576)
T 2acx_A 422 QLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452 (576)
T ss_dssp HHTCSSGGGSTTCSSSHHHHHHTSGGGTTCC
T ss_pred HhccCCHHHcCCCCCCCHHHHHhChhhccCC
Confidence 68899999999 789999999998864
No 412
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=28.99 E-value=9.5 Score=41.23 Aligned_cols=26 Identities=42% Similarity=0.701 Sum_probs=23.7
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (902)
+||+.||-+|.+.+++++||||....
T Consensus 303 ~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 303 CCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp HHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred HHcccChhhCCCHHHHhhCcCccccC
Confidence 79999999999999999999997544
No 413
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=28.49 E-value=9.1 Score=40.26 Aligned_cols=27 Identities=30% Similarity=0.583 Sum_probs=23.8
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||.+-..
T Consensus 274 ~~l~~dp~~Rps~~ell~~~~~~~~~~ 300 (335)
T 2owb_A 274 KMLQTDPTARPTINELLNDEFFTSGYI 300 (335)
T ss_dssp HHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred HHccCChhHCcCHHHHhcCccccCCCc
Confidence 678999999999999999999976543
No 414
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=28.40 E-value=6.2 Score=43.14 Aligned_cols=29 Identities=17% Similarity=0.070 Sum_probs=25.8
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYFEV 879 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (902)
+||+.||.+|.+.+++++||||..++...
T Consensus 346 ~~l~~dP~~Rpt~~~~l~~~~~~~~~~~~ 374 (413)
T 3dzo_A 346 GFLRYPKEDRLLPLQAMETPEYEQLRTEL 374 (413)
T ss_dssp HHTCSSGGGSCCHHHHTTSHHHHHHHHHH
T ss_pred HHccCChhhCcCHHHHHhCHHHHHHHHHH
Confidence 79999999999999999999998776543
No 415
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=28.37 E-value=9.8 Score=39.41 Aligned_cols=27 Identities=41% Similarity=0.674 Sum_probs=23.3
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||.....
T Consensus 275 ~~l~~dp~~Rps~~ell~h~~~~~~~~ 301 (313)
T 3cek_A 275 CCLKRDPKQRISIPELLAHPYVQIQTH 301 (313)
T ss_dssp HHTCSSTTTSCCHHHHHTSHHHHCC--
T ss_pred HHccCCcccCcCHHHHhcCccccCCCC
Confidence 799999999999999999999975443
No 416
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=28.28 E-value=1.5e+02 Score=31.34 Aligned_cols=57 Identities=21% Similarity=0.311 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhccCCCCCCHHHHHHHHHHcCCcccHHHHHHHH
Q psy767 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322 (902)
Q Consensus 266 ty~~LI~a~~~~g~~~~A~~lf~~m~~~~~~p~~~tl~~~l~~~~~~~~~~~~~~l~ 322 (902)
....+|.-|...|+.++|...++++......+........++.-.+....+.+..++
T Consensus 56 ~~~~ii~EYf~~~d~~Ea~~~l~eL~~p~~~~~~v~~~I~~aLdr~~~erE~~s~LL 112 (358)
T 3eiq_C 56 TLTPIIQEYFEHGDTNEVAEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLL 112 (358)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHTTTCCGGGGGHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHhcCChHHHHHHHHHH
Confidence 456789999999999999999999865544444444333333334444444444444
No 417
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=27.37 E-value=1.9e+02 Score=27.50 Aligned_cols=25 Identities=16% Similarity=0.126 Sum_probs=15.6
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy767 510 GFLVRHMVKTNQPIDKVLAVCHRLTD 535 (902)
Q Consensus 510 n~li~~~~~~g~~~~~A~~l~~~m~~ 535 (902)
.+.+...+..|. ...++++.+.+.+
T Consensus 211 ~t~l~~A~~~~~-~~~~~~l~~~l~d 235 (237)
T 3b7b_A 211 ETPLQCASLNSQ-VWSALQMSKALQD 235 (237)
T ss_dssp CCHHHHSCTTCH-HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHH-HHHHHHHHHHhhc
Confidence 344455555666 6777777777665
No 418
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=27.05 E-value=30 Score=34.33 Aligned_cols=119 Identities=11% Similarity=-0.014 Sum_probs=68.7
Q ss_pred HHHHHHHCCCchHHHHHHHHHHHCCCCCCHHH-------HHHHHHhHHHHHHHH--HcCCHHHHHHHHHHhhhCC-----
Q psy767 89 LLRVYLDNEHTFSPTDFLAKLESQGIEPNRVT-------YQQLISNSKLISKYC--QDGNIEGATKILEFMRDKT----- 154 (902)
Q Consensus 89 li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t-------~~~ll~~~~li~~~~--~~g~~~~A~~l~~~m~~~~----- 154 (902)
.+...++.|+.+....+++.+.+.|..++... .+.| ..+.. +.|+.+-+..+++.-...+
T Consensus 8 ~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L------~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 8 ILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCL------PKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp HHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHH------HHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHH------HHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 44556678999998889988888776665332 2333 33321 5688888877777654321
Q ss_pred ----CC-CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHH----------------HHHHHHHHHHcCChhHH
Q psy767 155 ----FP-ISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT----------------YTKLMCGYAKHGDMDSI 213 (902)
Q Consensus 155 ----~~-p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t----------------y~~ll~a~~~~g~~~~a 213 (902)
+. .|..-++.|. ..+..|+.+-+ +.+.+.|..++... -.+.+...+..|+.+-+
T Consensus 82 ~~~~~~~~d~~g~t~L~-~A~~~g~~~~v----~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v 156 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALH-IAIERRCKHYV----ELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIV 156 (260)
T ss_dssp HTCCBCCSSEESBCHHH-HHHHTTCHHHH----HHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHH
T ss_pred hcccccccccCCCCHHH-HHHHcCCHHHH----HHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHH
Confidence 10 1112233444 34556776544 44445676655442 22445556677887766
Q ss_pred HHHHH
Q psy767 214 KTKIP 218 (902)
Q Consensus 214 ~~l~~ 218 (902)
.-+++
T Consensus 157 ~~Ll~ 161 (260)
T 3jxi_A 157 HYLTE 161 (260)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66666
No 419
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=26.15 E-value=1.8e+02 Score=25.45 Aligned_cols=67 Identities=18% Similarity=0.237 Sum_probs=46.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHCCCCCCHHH
Q psy767 129 KLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND--MASAEGILTMMSQAGLEPSAQT 196 (902)
Q Consensus 129 ~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn~Li~~~~~~g~--~~~A~~l~~~M~~~g~~pd~~t 196 (902)
.++.=|...|+.++|...++++....+ -...++.++..++-+.++ .+.+.+++..+...|+-+....
T Consensus 12 ~ll~EY~~~~D~~Ea~~cl~eL~~p~f-~~e~V~~~i~~alE~~~~~~~e~~~~LL~~L~~~~~is~~q~ 80 (129)
T 2nsz_A 12 MLLKEYLLSGDISEAEHCLKELEVPHF-HHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQM 80 (129)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHTCGGG-HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHhCCCcc-HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHH
Confidence 348889999999999999999864322 123555666667766543 4678888888888876644443
No 420
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=26.11 E-value=5.4e+02 Score=26.88 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhccC
Q psy767 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSS 293 (902)
Q Consensus 266 ty~~LI~a~~~~g~~~~A~~lf~~m~~~ 293 (902)
..+.+|.-|...|+.++|.+.++++...
T Consensus 219 ki~~lL~EY~~s~D~~EA~~ci~EL~~p 246 (358)
T 3eiq_C 219 EIDMLLKEYLLSGDISEAEHCLKELEVP 246 (358)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHCCT
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHccCC
Confidence 4588999999999999999999998653
No 421
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=25.37 E-value=2.9e+02 Score=28.47 Aligned_cols=39 Identities=10% Similarity=0.108 Sum_probs=22.4
Q ss_pred HHHHHHHhcCCCCcc---chHHHHHHHHHhcCHHHHHHHHHH
Q psy767 660 EVFSQLRSVGVTIGS---ITSAYVVHMLRQHNLKEAALLAKS 698 (902)
Q Consensus 660 ~~~~~l~~~g~~~~~---~~~~~l~~~~~~g~~~~a~~~~~~ 698 (902)
++++.+-+.|..++. .-...+..+++.|+.+-+.-+++.
T Consensus 225 ~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 225 DVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266 (364)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHc
Confidence 466666667766654 222344445666666666666554
No 422
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=25.34 E-value=12 Score=38.36 Aligned_cols=27 Identities=30% Similarity=0.501 Sum_probs=23.9
Q ss_pred CCCCCCcchhhhHHHhhcCCCccCCCC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNGYYF 877 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (902)
+||+.||.+|.+.+++++||||.+-..
T Consensus 253 ~~l~~dp~~Rps~~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 253 ACLNKEPSFRPTAKELLKHKFILRNAK 279 (303)
T ss_dssp HHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred HHcCCChhhCcCHHHHhhChhhhcCCC
Confidence 799999999999999999999965433
No 423
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=25.22 E-value=3e+02 Score=25.11 Aligned_cols=164 Identities=10% Similarity=0.023 Sum_probs=80.0
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCCCCccc--HHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHHHHHHHHHcCCHHHH
Q psy767 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGD--YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAA 430 (902)
Q Consensus 353 i~~y~~~g~~~~A~~~~~~m~~~~~~~~--~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t~i~~l~~~g~~~~A 430 (902)
+...+..|+.+....++..-.......+ -.+.+...+..|+.+.+.-+++.-........+..|.+...+..|..+-+
T Consensus 9 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 88 (201)
T 3hra_A 9 LLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEIL 88 (201)
T ss_dssp HHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 3445678899988888876442322222 12344455677777666666654222010111123455556677887766
Q ss_pred HHHHHHHHhccCCCCCcccchhhHHHhhhhcCCCCCccccchHHHHHHHHhcCChHHHHHHHHHHHHccCCCCCccchHH
Q psy767 431 YRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGG 510 (902)
Q Consensus 431 ~~~~~~m~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~li~~~~k~g~~~~A~~l~~~m~~~~~~~~~~~~~~n 510 (902)
..+++. .+..+... ...|.+ .+...++.|+.+-+..+++.-.. ..+..+.. ..
T Consensus 89 ~~Ll~~----~~~~~~~~---------------~~~g~t-----~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~~-g~ 141 (201)
T 3hra_A 89 AYMLKH----ATPDLNKH---------------NRYGGN-----ALIPAAEKGHIDNVKLLLEDGRE--DIDFQNDF-GY 141 (201)
T ss_dssp HHHHHH----SCCCTTCC---------------CTTSCC-----SHHHHHHTTCHHHHHHHHHHCCC--CTTCCCTT-SC
T ss_pred HHHHhc----cCcccccc---------------cCCCCc-----HHHHHHHcCCHHHHHHHHHcCCC--CcCCCCCC-CC
Confidence 555543 22222211 111222 23334566777655555543211 11111111 22
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHCCCCCChh
Q psy767 511 FLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAF 543 (902)
Q Consensus 511 ~li~~~~~~g~~~~~A~~l~~~m~~~g~~Pd~~ 543 (902)
+.+...+..+.....-.++++.+.+.|..|+..
T Consensus 142 t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~ 174 (201)
T 3hra_A 142 TALIEAVGLREGNQLYQDIVKLLMENGADQSIK 174 (201)
T ss_dssp CHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCC
T ss_pred CHHHHHHHhccchhhHHHHHHHHHHCCCCCCcc
Confidence 333334444442344467778888888877654
No 424
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=25.09 E-value=83 Score=26.30 Aligned_cols=61 Identities=15% Similarity=0.024 Sum_probs=45.8
Q ss_pred HHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHHH
Q psy767 90 LRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163 (902)
Q Consensus 90 i~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~yn 163 (902)
+..+...|+|++|..+.+.+. .||...|-+| +-.+.|-.+.+..-+..+..+| .|....|.
T Consensus 47 ~sSLmNrG~Yq~Al~l~~~~c----~pdlepw~AL--------ce~rlGl~s~le~rL~~la~sg-~p~~q~Fa 107 (116)
T 2p58_C 47 LSSLMNRGDYASALQQGNKLA----YPDLEPWLAL--------CEYRLGLGSALESRLNRLARSQ-DPRIQTFV 107 (116)
T ss_dssp HHHHHHTTCHHHHHHHHTTSC----CGGGHHHHHH--------HHHHHTCHHHHHHHHHHHTTCC-CHHHHHHH
T ss_pred HHHHHcchhHHHHHHhcCCCC----CchHHHHHHH--------HHHhcccHHHHHHHHHHHHhCC-CHHHHHHH
Confidence 344678999999999887754 8999988766 4467888888888888888887 44444443
No 425
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=23.86 E-value=1.6e+02 Score=29.59 Aligned_cols=71 Identities=14% Similarity=0.155 Sum_probs=51.1
Q ss_pred HHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCC--CCCCHHHHHHHHHH
Q psy767 91 RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT--FPISEGVFNALIYG 168 (902)
Q Consensus 91 ~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~--~~p~~~~yn~Li~~ 168 (902)
....+.|++++|++....-++.. +-|...=..+ +..+|-.|+++.|.+-++...+.+ ..|....|..+|.+
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~-P~da~~R~~L------fqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~a 77 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKAS-PKDASLRSSF------IELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKA 77 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTC-TTCHHHHHHH------HHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhC-CcCHHHHHHH------HHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHH
Confidence 45667899999999998888764 2255555556 999999999999999888876643 22333455555554
No 426
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=23.61 E-value=4.5e+02 Score=24.51 Aligned_cols=20 Identities=20% Similarity=0.604 Sum_probs=13.7
Q ss_pred HHHHHHHcCCHHHHHHHHHH
Q psy767 270 LMCGYAKHGDMDSVRRLLAQ 289 (902)
Q Consensus 270 LI~a~~~~g~~~~A~~lf~~ 289 (902)
.+...++.|+.+....++..
T Consensus 9 ~l~~A~~~g~~~~v~~ll~~ 28 (231)
T 3aji_A 9 MICNLAYSGKLDELKERILA 28 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHhCCHHHHHHHHHh
Confidence 35566677787777777765
No 427
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=23.05 E-value=5.9e+02 Score=25.62 Aligned_cols=21 Identities=29% Similarity=0.458 Sum_probs=12.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHH
Q psy767 268 TKLMCGYAKHGDMDSVRRLLA 288 (902)
Q Consensus 268 ~~LI~a~~~~g~~~~A~~lf~ 288 (902)
++.+..-++.|+++-+..+++
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~ 46 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLE 46 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH
T ss_pred ChHHHHHHHcCCHHHHHHHHH
Confidence 445555567777776665554
No 428
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=22.99 E-value=2.5e+02 Score=24.42 Aligned_cols=83 Identities=16% Similarity=0.160 Sum_probs=44.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCCCCccc--HHHHHHHHHHcCChHHHHHHHHHcccCCCCCCCHHHHHHHHHHcCCHHH
Q psy767 352 LMCGYAKHGDMDSIRRLLAQNGSSLVNGD--YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDA 429 (902)
Q Consensus 352 Li~~y~~~g~~~~A~~~~~~m~~~~~~~~--~~~li~~~~~~g~~~~A~~l~~~m~~~~g~~pd~~t~i~~l~~~g~~~~ 429 (902)
.+...+..|+.+.+..+++.....+...+ -.+.+.. +..|+.+.+..+++.-........+..|.+...+..|+.+-
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 83 (156)
T 1bd8_A 5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDT 83 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 34556778899999888887322222222 1233344 66777776666665422211111122345555667777765
Q ss_pred HHHHHH
Q psy767 430 AYRIVN 435 (902)
Q Consensus 430 A~~~~~ 435 (902)
...+++
T Consensus 84 v~~Ll~ 89 (156)
T 1bd8_A 84 LKVLVE 89 (156)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 429
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=22.92 E-value=3.5e+02 Score=23.82 Aligned_cols=83 Identities=14% Similarity=0.090 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHhCC---CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHcCChhHHHHHHHhcccCCCccchhhHH
Q psy767 157 ISEGVFNALIYGHSQAN---DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ 233 (902)
Q Consensus 157 p~~~~yn~Li~~~~~~g---~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a~~~~g~~~~a~~l~~~~~~~~~~~~~~~~~ 233 (902)
|+..+-=.+.-++.++. +..+++.++++..+.+..-....+-.|.-|+.+.|+++.|.+..+.+.+..+...
T Consensus 38 vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~----- 112 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK----- 112 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCH-----
T ss_pred CChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCH-----
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHH
Q psy767 234 LTNLLILVSSDMASAEGILTMMSQ 257 (902)
Q Consensus 234 ~~~~~~~~~g~~~~A~~l~~~m~~ 257 (902)
.|..+-..+.+
T Consensus 113 -------------QA~~Lk~~Ie~ 123 (134)
T 3o48_A 113 -------------QVGALKSMVED 123 (134)
T ss_dssp -------------HHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHH
No 430
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=22.78 E-value=23 Score=37.97 Aligned_cols=26 Identities=23% Similarity=0.330 Sum_probs=21.8
Q ss_pred CCCCCCcchhhhH----HHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWSC----DQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~~----~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.++ +++++||||.++.
T Consensus 272 ~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~ 301 (373)
T 2r5t_A 272 GLLQKDRTKRLGAKDDFMEIKSHVFFSLIN 301 (373)
T ss_dssp HHTCSSGGGSTTTTTTHHHHHTSGGGTTCC
T ss_pred HHcccCHHhCCCCCCCHHHHhCCccccCCC
Confidence 6788899999887 6899999998763
No 431
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=22.38 E-value=38 Score=36.79 Aligned_cols=25 Identities=32% Similarity=0.531 Sum_probs=18.7
Q ss_pred CCCCCCcchhh---hHHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRW---SCDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~---~~~~~~~~~~~~~~~ 876 (902)
+||. ||-+|+ +++++++||||.++.
T Consensus 308 ~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~ 335 (412)
T 2vd5_A 308 RLLC-PPETRLGRGGAGDFRTHPFFFGLD 335 (412)
T ss_dssp TTSS-CGGGCTTTTTHHHHHTSGGGTTCC
T ss_pred HHcC-ChhhcCCCCCHHHHhcCCCcCCCC
Confidence 4555 566664 889999999997763
No 432
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=22.30 E-value=76 Score=31.11 Aligned_cols=119 Identities=12% Similarity=0.014 Sum_probs=69.3
Q ss_pred HHHHHHHHCCCchHHHHHHHHHHHCCCCCCH-------HHHHHHHHhHHHHHHHHHc---CCHHHHHHHHHHhhhCCCCC
Q psy767 88 ALLRVYLDNEHTFSPTDFLAKLESQGIEPNR-------VTYQQLISNSKLISKYCQD---GNIEGATKILEFMRDKTFPI 157 (902)
Q Consensus 88 ~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~-------~t~~~ll~~~~li~~~~~~---g~~~~A~~l~~~m~~~~~~p 157 (902)
+.+...++.|+.+.+..+++.+.+.|..++. .-.+ . +...+.. |+.+-+..+++.-...+...
T Consensus 4 t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t-~------L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 76 (256)
T 2etb_A 4 DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKT-C------LMKAVLNLQDGVNACIMPLLQIDKDSGNPK 76 (256)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBC-H------HHHHHHTCBTTBCTTHHHHHHHHHHTTCSS
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCC-H------HHHHHHccccchHHHHHHHHhcCCcccchh
Confidence 3455667789999888888888887765553 2222 2 4555666 88888887777654433111
Q ss_pred ----------CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHH---------------HHHHHHHHHHcCChhH
Q psy767 158 ----------SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT---------------YTKLMCGYAKHGDMDS 212 (902)
Q Consensus 158 ----------~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t---------------y~~ll~a~~~~g~~~~ 212 (902)
|..-++.|.. .+..|+.+-+ +.+.+.|..++... -.+.+...+..|+.+-
T Consensus 77 ~~~~~~~~~~d~~g~t~L~~-A~~~g~~~~v----~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~ 151 (256)
T 2etb_A 77 PLVNAQCTDEFYQGHSALHI-AIEKRSLQCV----KLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDV 151 (256)
T ss_dssp CGGGCCCCSTTTTTCCHHHH-HHHTTCHHHH----HHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHH
T ss_pred hhcccccccccccCCCHHHH-HHHcCCHHHH----HHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHH
Confidence 1223444444 4556766544 44445565554432 2234555566787776
Q ss_pred HHHHHH
Q psy767 213 IKTKIP 218 (902)
Q Consensus 213 a~~l~~ 218 (902)
+.-+++
T Consensus 152 v~~Ll~ 157 (256)
T 2etb_A 152 VTYLLE 157 (256)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666666
No 433
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=22.23 E-value=3.3e+02 Score=28.29 Aligned_cols=150 Identities=15% Similarity=0.187 Sum_probs=76.3
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHCCCCCChhhHHHHHHHhcccccccCcchhhHhhhhhccCcchHHHHHHHHHHh
Q psy767 509 GGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQA 588 (902)
Q Consensus 509 ~n~li~~~~~~g~~~~~A~~l~~~m~~~g~~Pd~~t~~~ll~a~~~~~~~~g~~~~~~~~~~~~~a~~~~~~ll~~m~~~ 588 (902)
.+.++.-|...|+ .++|...++++......|. .....+..+ + ..+. . ..+....|+..+.+.
T Consensus 14 ~~~ll~Ey~~~~d-~~Ea~~ci~el~~p~~~~~-~v~~~i~~~--l---e~~~--~---------~re~~~~Ll~~L~~~ 75 (339)
T 1ug3_A 14 SKAIIEEYLHLND-MKEAVQCVQELASPSLLFI-FVRHGVEST--L---ERSA--I---------AREHMGQLLHQLLCA 75 (339)
T ss_dssp HHHHHHHHHHHCC-HHHHHHHHHTTCCGGGHHH-HHHHHHHHH--T---TTCH--H---------HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCC-HHHHHHHHHHcCCcccHHH-HHHHHHHHH--h---CCCH--H---------HHHHHHHHHHHHHHC
Confidence 3556667777777 7777777777643222221 112222212 2 2221 1 112233377777766
Q ss_pred hHHHhhhhhhhcccccccchhhhHHHHHhhhHHHHHHHHHHHHHHhCCC-CChHHHHHhhhccCCCCCCChH-HHHHHH-
Q psy767 589 EDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLRILQVAEAEFGVG-SNTETLRDYVLPVLSPPNQVSG-EVFSQL- 665 (902)
Q Consensus 589 g~~~~~~~~~~~~~~i~p~~~~~~~li~~~~~~~al~ll~~m~~~~g~~-P~~~t~~~lv~~~~~~~~~~~~-~~~~~l- 665 (902)
| + +. . ....++-.++++.+ .+..++ |+...+...+.+.+-....... .++..+
T Consensus 76 ~------------~-is--~--------~~~~~Gf~~~~~~l-~Dl~lDiP~a~~~La~~v~~~i~~g~l~~~~l~~~~~ 131 (339)
T 1ug3_A 76 G------------H-LS--T--------AQYYQGLYEILELA-EDMEIDIPHVWLYLAELVTPILQEGGVPMGELFREIT 131 (339)
T ss_dssp T------------S-SC--H--------HHHHHHHHHHHHHH-HHHTTTCTTHHHHHHHHHGGGGSTTSCCHHHHHHHHT
T ss_pred C------------C-CC--H--------HHHHHHHHHHHhhC-hHhhcCccchHHHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 6 1 22 1 11233445555666 666665 8888877777665552221121 344332
Q ss_pred ---HhcCCCCccchHHHHHHHHHhcCHHHHHHHHHHhhh
Q psy767 666 ---RSVGVTIGSITSAYVVHMLRQHNLKEAALLAKSFRA 701 (902)
Q Consensus 666 ---~~~g~~~~~~~~~~l~~~~~~g~~~~a~~~~~~~~~ 701 (902)
.+.|..- .....++..+++....+.+.+++++...
T Consensus 132 ~~l~~~g~~~-~fl~~vl~~l~~~~g~~~l~~~~~~s~l 169 (339)
T 1ug3_A 132 KPLRPLGKAA-SLLLEILGLLCKSMGPKKVGTLWREAGL 169 (339)
T ss_dssp TTHHHHTCHH-HHHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred HhhhccchHH-HHHHHHHHHHHHHcCHHHHHHHHHHcCC
Confidence 2223111 2444455555777788888888886543
No 434
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=21.82 E-value=1.1e+03 Score=28.20 Aligned_cols=89 Identities=11% Similarity=0.032 Sum_probs=57.6
Q ss_pred HHHHHHcCC---HHHHHHHHHHhhhC----CCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q psy767 131 ISKYCQDGN---IEGATKILEFMRDK----TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203 (902)
Q Consensus 131 i~~~~~~g~---~~~A~~l~~~m~~~----~~~p~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~ty~~ll~a 203 (902)
+...|+.|. .+.|.+.|+..... .++||... .+...-.+.|..++-..+++.+... .+..--..++.+
T Consensus 693 l~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~--~vy~~~~~~g~~~~~~~l~~~~~~~---~~~~ek~~ll~a 767 (909)
T 4fke_A 693 ISTACSNGLPQCENLAKTLFDQWMSDPENNPIHPNLRS--TIYCNAIAQGGQDQWDFAWGQLQQA---QLVNEADKLRSA 767 (909)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHTCTTSCCSCTTTHH--HHHHHHHHHSCHHHHHHHHHHHHHC---CSHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHHhhCCCCCcCCHHHHH--HHHHHHHHhCCHHHHHHHHHHHHcc---CCHHHHHHHHHH
Confidence 677777776 45678888776542 25565432 2333334557766666777777764 244555678888
Q ss_pred HHHcCChhHHHHHHHhcccCC
Q psy767 204 YAKHGDMDSIKTKIPSLKPQS 224 (902)
Q Consensus 204 ~~~~g~~~~a~~l~~~~~~~~ 224 (902)
++...+.....++++.....+
T Consensus 768 L~~~~d~~~l~~~L~~~l~~~ 788 (909)
T 4fke_A 768 LACSNEVWLLNRYLGYTLNPD 788 (909)
T ss_dssp HTTCCCHHHHHHHHHHTTCTT
T ss_pred hCCCCCHHHHHHHHHHHhCCC
Confidence 888888887788887776543
No 435
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=21.45 E-value=23 Score=40.16 Aligned_cols=26 Identities=42% Similarity=0.741 Sum_probs=21.9
Q ss_pred CCCCCCcchhhh-----HHHhhcCCCccCCC
Q psy767 851 RCLDKDPLRRWS-----CDQLLRHPYFNGYY 876 (902)
Q Consensus 851 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 876 (902)
+||+.||.+|.+ ++++++||||.++.
T Consensus 426 ~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~ 456 (543)
T 3c4z_A 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456 (543)
T ss_dssp HHSCSSGGGSCCCBTTBSHHHHTSGGGTTCC
T ss_pred HhccCCHhHCCCCcccCHHHHHcCccccCCC
Confidence 678888889984 69999999998864
No 436
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=21.41 E-value=3.2e+02 Score=25.99 Aligned_cols=57 Identities=12% Similarity=0.145 Sum_probs=36.7
Q ss_pred cCCHHHHHHHHHHhhhCCCCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCCCC
Q psy767 137 DGNIEGATKILEFMRDKTFPI-SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS 193 (902)
Q Consensus 137 ~g~~~~A~~l~~~m~~~~~~p-~~~~yn~Li~~~~~~g~~~~A~~l~~~M~~~g~~pd 193 (902)
++...++..+|..|...|+-- -..-|-.....+...|++.+|.++|+.-++.+-+|-
T Consensus 92 ~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~P~ 149 (202)
T 3esl_A 92 SNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCRPY 149 (202)
T ss_dssp TTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred ccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccH
Confidence 344667777777776665432 233466666666777777777777777777766663
No 437
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=20.77 E-value=7.1e+02 Score=25.72 Aligned_cols=113 Identities=10% Similarity=0.093 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHH----HHHHHhhhCCCCCCH
Q psy767 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT----KILEFMRDKTFPISE 159 (902)
Q Consensus 84 ~~yn~li~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~----~l~~~m~~~~~~p~~ 159 (902)
.+|-++..-|.+.+++++|++++-.- ...+.+.|....|- -+++-..+.++++|.
T Consensus 36 Q~~RTi~~Ry~~~k~y~eAidLL~~G---------------------A~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~ 94 (336)
T 3lpz_A 36 QETRLVAARYSKQGNWAAAVDILASV---------------------SQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDG 94 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH---------------------HHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCH
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHH---------------------HHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCH
Confidence 34556666666666666666654331 22334445544433 334555667777777
Q ss_pred HHHHHHHHHHHhCCCHH-HHHHHHHHHHH----CC--CCCCHHHHHHHHHHHHHcCChhHHHHHH
Q psy767 160 GVFNALIYGHSQANDMA-SAEGILTMMSQ----AG--LEPSAQTYTKLMCGYAKHGDMDSIKTKI 217 (902)
Q Consensus 160 ~~yn~Li~~~~~~g~~~-~A~~l~~~M~~----~g--~~pd~~ty~~ll~a~~~~g~~~~a~~l~ 217 (902)
....-|+..+.....-+ .=.++.+++.+ .| -.-|......+-..|.+.+++.+|...|
T Consensus 95 ~~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 95 ASRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 77777777776655321 11233333322 22 2335666667777888888888777766
No 438
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=20.51 E-value=17 Score=40.44 Aligned_cols=24 Identities=25% Similarity=0.570 Sum_probs=22.2
Q ss_pred CCCCCCcchhhhHHHhhcCCCccC
Q psy767 851 RCLDKDPLRRWSCDQLLRHPYFNG 874 (902)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~ 874 (902)
+||+.||.+|.+.+++++||||..
T Consensus 249 ~~L~~dP~~Rpt~~eil~hp~~~~ 272 (476)
T 2y94_A 249 HMLQVDPMKRATIKDIREHEWFKQ 272 (476)
T ss_dssp HHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred HHcCCCchhCcCHHHHHhCHHhhh
Confidence 688999999999999999999964
No 439
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=20.28 E-value=78 Score=26.42 Aligned_cols=59 Identities=10% Similarity=-0.050 Sum_probs=43.4
Q ss_pred HHHHHCCCchHHHHHHHHHHHCCCCCCHHHHHHHHHhHHHHHHHHHcCCHHHHHHHHHHhhhCCCCCCHHHH
Q psy767 91 RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162 (902)
Q Consensus 91 ~~~~~~g~~~~A~~l~~~M~~~g~~pd~~t~~~ll~~~~li~~~~~~g~~~~A~~l~~~m~~~~~~p~~~~y 162 (902)
..+...|+|++|..+.+.+. .||...|-+| +-.+.|-.+.+..-+..+..+| .|....|
T Consensus 47 sSLmNrG~Yq~Al~l~~~~c----~pdlepw~AL--------ce~rlGl~s~le~rL~~la~sg-~p~~q~F 105 (115)
T 2uwj_G 47 SSLANQGRYQEALAFAHGNP----WPALEPWFAL--------CEWHLGLGAALDRRLAGLGGSS-DPALADF 105 (115)
T ss_dssp HHHHHTTCHHHHHGGGTTCC----CGGGHHHHHH--------HHHHTTCHHHHHHHHHHHHTCS-SHHHHHH
T ss_pred HHHHcchhHHHHHHhcCCCC----CchHHHHHHH--------HHHhcccHHHHHHHHHHHHhCC-CHHHHHH
Confidence 34677899999988876654 7888888766 4467888888888887888877 4444444
Done!