Query psy7671
Match_columns 115
No_of_seqs 103 out of 175
Neff 5.1
Searched_HMMs 29240
Date Sat Aug 17 00:27:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7671.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7671hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f3f_A Nucleoporin SEH1; struc 95.4 0.14 4.7E-06 36.2 9.0 45 53-98 305-349 (351)
2 3f3f_A Nucleoporin SEH1; struc 91.9 0.5 1.7E-05 33.2 6.5 38 52-89 9-46 (351)
3 3jrp_A Fusion protein of prote 91.6 1.4 4.7E-05 31.8 8.7 35 53-87 255-289 (379)
4 4a11_B DNA excision repair pro 91.6 0.89 3E-05 33.2 7.8 34 53-86 333-366 (408)
5 4aow_A Guanine nucleotide-bind 91.3 1.5 5E-05 31.4 8.5 35 52-86 304-338 (340)
6 4a11_B DNA excision repair pro 91.0 1.6 5.4E-05 31.8 8.7 34 52-85 97-131 (408)
7 4gz8_A Semaphorin-3A; multi-do 90.7 0.45 1.5E-05 41.6 6.2 30 51-80 466-495 (667)
8 1k8k_C P40, ARP2/3 complex 41 90.2 1.3 4.6E-05 32.0 7.6 32 53-84 141-172 (372)
9 4h5i_A Guanine nucleotide-exch 90.2 1.9 6.5E-05 32.7 8.7 35 52-86 310-344 (365)
10 2xzm_R RACK1; ribosome, transl 90.1 1.1 3.8E-05 33.2 7.2 34 52-85 74-107 (343)
11 3zwl_B Eukaryotic translation 89.7 3.6 0.00012 29.3 9.5 34 52-85 72-105 (369)
12 3mmy_A MRNA export factor; mRN 89.4 1.4 4.7E-05 31.6 7.0 35 52-86 84-118 (368)
13 3frx_A Guanine nucleotide-bind 89.4 2 6.9E-05 31.6 8.1 34 52-85 63-96 (319)
14 1k8k_C P40, ARP2/3 complex 41 89.2 1.4 4.9E-05 31.8 7.1 35 52-86 200-234 (372)
15 3k26_A Polycomb protein EED; W 89.1 1.9 6.4E-05 30.9 7.5 31 54-84 335-365 (366)
16 3i2n_A WD repeat-containing pr 88.7 1.8 6.2E-05 31.0 7.3 34 52-85 319-353 (357)
17 1yfq_A Cell cycle arrest prote 88.7 3.3 0.00011 29.6 8.6 32 54-85 251-282 (342)
18 1r5m_A SIR4-interacting protei 88.0 0.91 3.1E-05 33.3 5.3 33 53-85 246-278 (425)
19 3zwl_B Eukaryotic translation 87.7 2.5 8.4E-05 30.2 7.4 34 52-85 313-346 (369)
20 3vl1_A 26S proteasome regulato 87.7 2.8 9.6E-05 31.1 7.9 35 53-87 289-324 (420)
21 4ery_A WD repeat-containing pr 87.3 4.4 0.00015 29.0 8.6 35 52-86 63-97 (312)
22 4fhn_B Nucleoporin NUP120; pro 87.3 0.99 3.4E-05 40.7 6.1 80 4-86 186-269 (1139)
23 4aow_A Guanine nucleotide-bind 86.9 2.3 7.8E-05 30.3 6.8 35 52-86 36-71 (340)
24 4gqb_B Methylosome protein 50; 86.6 2.9 0.0001 31.7 7.7 34 52-85 125-158 (344)
25 2ynn_A Coatomer subunit beta'; 86.5 5.2 0.00018 29.0 8.7 35 52-86 95-129 (304)
26 1r5m_A SIR4-interacting protei 86.3 1 3.6E-05 32.9 4.8 29 56-84 396-424 (425)
27 4ery_A WD repeat-containing pr 85.7 6.3 0.00021 28.2 8.7 33 53-85 148-180 (312)
28 4gq2_M Nucleoporin NUP120; bet 85.4 5.8 0.0002 35.3 9.9 80 4-86 184-267 (950)
29 4g56_B MGC81050 protein; prote 85.3 2.9 9.8E-05 31.5 7.0 34 52-85 137-170 (357)
30 3dwl_C Actin-related protein 2 85.2 1.5 5.2E-05 32.2 5.3 32 53-84 145-176 (377)
31 1sq9_A Antiviral protein SKI8; 85.2 2.6 8.8E-05 30.9 6.5 36 52-87 60-102 (397)
32 4ggc_A P55CDC, cell division c 84.5 1.2 4.1E-05 31.5 4.3 32 53-84 283-314 (318)
33 1ri6_A Putative isomerase YBHE 84.4 2.6 8.8E-05 30.0 6.0 43 54-96 37-80 (343)
34 3dwl_C Actin-related protein 2 84.4 1.2 4.1E-05 32.7 4.4 35 52-86 53-87 (377)
35 2pbi_B Guanine nucleotide-bind 83.8 4.6 0.00016 30.2 7.5 33 53-85 153-185 (354)
36 3jrp_A Fusion protein of prote 83.7 9.9 0.00034 27.2 10.2 34 53-86 205-241 (379)
37 3vl1_A 26S proteasome regulato 83.7 6.7 0.00023 29.0 8.3 34 52-85 179-212 (420)
38 1q47_A Semaphorin 3A; beta pro 83.4 3.2 0.00011 34.7 7.1 28 53-80 460-487 (495)
39 3iz6_a 40S ribosomal protein R 83.3 4.2 0.00014 30.6 7.2 34 52-85 342-375 (380)
40 1gxr_A ESG1, transducin-like e 83.1 9.9 0.00034 26.7 9.2 33 53-85 182-214 (337)
41 2hes_X YDR267CP; beta-propelle 83.0 3.4 0.00012 30.5 6.4 35 53-87 106-140 (330)
42 2vdu_B TRNA (guanine-N(7)-)-me 82.3 3.8 0.00013 31.5 6.6 34 52-85 193-229 (450)
43 3dm0_A Maltose-binding peripla 82.3 7 0.00024 32.0 8.5 34 52-85 428-461 (694)
44 1got_B GT-beta; complex (GTP-b 82.1 8.9 0.0003 28.2 8.4 34 53-86 225-258 (340)
45 3sre_A PON1, serum paraoxonase 82.1 7.2 0.00025 31.0 8.4 85 2-97 61-160 (355)
46 3bg1_A Protein SEC13 homolog; 82.1 1.7 5.7E-05 32.0 4.4 35 52-86 11-45 (316)
47 2ynn_A Coatomer subunit beta'; 81.8 6.3 0.00022 28.5 7.4 72 8-86 11-87 (304)
48 3ow8_A WD repeat-containing pr 80.8 6.8 0.00023 28.9 7.4 33 53-85 247-279 (321)
49 3dw8_B Serine/threonine-protei 80.8 7 0.00024 29.1 7.5 36 55-91 286-321 (447)
50 3dw8_B Serine/threonine-protei 80.7 4.5 0.00015 30.2 6.4 36 52-87 224-260 (447)
51 1pgu_A Actin interacting prote 80.6 7 0.00024 30.3 7.6 33 52-85 582-614 (615)
52 2pm7_B Protein transport prote 80.5 4.2 0.00014 29.4 6.0 34 52-85 7-40 (297)
53 3ow8_A WD repeat-containing pr 80.5 10 0.00034 28.0 8.2 33 53-85 205-237 (321)
54 3scy_A Hypothetical bacterial 80.4 3.9 0.00013 30.0 5.9 41 56-96 51-95 (361)
55 4g56_B MGC81050 protein; prote 80.1 2.7 9.2E-05 31.7 5.0 43 52-94 309-352 (357)
56 2aq5_A Coronin-1A; WD40 repeat 79.8 8.5 0.00029 28.7 7.7 33 53-85 130-163 (402)
57 1gxr_A ESG1, transducin-like e 79.6 13 0.00046 26.0 9.1 35 52-86 95-129 (337)
58 1ri6_A Putative isomerase YBHE 79.4 4.9 0.00017 28.5 5.9 42 56-97 278-320 (343)
59 3k26_A Polycomb protein EED; W 78.9 12 0.00039 26.7 7.9 34 52-85 159-192 (366)
60 1got_B GT-beta; complex (GTP-b 78.7 17 0.00058 26.6 9.8 34 53-86 96-129 (340)
61 3mmy_A MRNA export factor; mRN 78.5 7.4 0.00025 27.6 6.7 39 52-90 37-78 (368)
62 3hfq_A Uncharacterized protein 77.4 7.1 0.00024 28.4 6.4 35 54-88 85-120 (347)
63 3odt_A Protein DOA1; ubiquitin 77.1 13 0.00045 25.8 7.6 34 53-86 58-91 (313)
64 3sfz_A APAF-1, apoptotic pepti 76.6 14 0.0005 31.9 9.1 75 4-85 609-688 (1249)
65 3fm0_A Protein CIAO1; WDR39,SG 76.5 20 0.0007 26.3 9.8 35 52-86 301-336 (345)
66 2xyi_A Probable histone-bindin 76.3 10 0.00035 28.9 7.4 35 52-86 229-264 (430)
67 2aq5_A Coronin-1A; WD40 repeat 76.1 5.3 0.00018 29.9 5.6 36 52-87 79-115 (402)
68 3i2n_A WD repeat-containing pr 76.0 18 0.00063 25.6 8.7 35 52-86 257-292 (357)
69 1yfq_A Cell cycle arrest prote 75.6 9.1 0.00031 27.2 6.5 36 52-87 9-44 (342)
70 1nr0_A Actin interacting prote 75.2 15 0.00053 29.6 8.5 33 53-85 238-270 (611)
71 3frx_A Guanine nucleotide-bind 75.2 15 0.00052 26.7 7.8 33 52-84 105-137 (319)
72 1erj_A Transcriptional repress 75.1 17 0.00058 27.3 8.2 34 52-85 163-196 (393)
73 2ovr_B FBW7, F-BOX/WD repeat p 74.5 8.1 0.00028 29.3 6.3 35 53-87 406-444 (445)
74 1olz_A Semaphorin 4D; developm 74.5 6.2 0.00021 34.2 6.2 29 52-80 447-477 (663)
75 3bg1_A Protein SEC13 homolog; 74.3 8.9 0.0003 28.0 6.3 46 54-100 262-307 (316)
76 3ei3_B DNA damage-binding prot 74.2 9.5 0.00032 28.0 6.5 34 53-86 203-237 (383)
77 1sq9_A Antiviral protein SKI8; 73.9 6.1 0.00021 28.9 5.3 33 53-85 290-322 (397)
78 1xks_A Nuclear pore complex pr 73.7 37 0.0013 28.0 10.7 47 58-107 211-257 (450)
79 3mkq_A Coatomer beta'-subunit; 73.4 23 0.00079 28.8 9.1 34 53-86 96-129 (814)
80 1vyh_C Platelet-activating fac 73.3 14 0.00048 28.1 7.5 34 52-85 148-181 (410)
81 2pm9_A Protein WEB1, protein t 73.2 7.7 0.00026 28.5 5.7 34 52-85 65-98 (416)
82 3v7d_B Cell division control p 73.2 8.7 0.0003 29.0 6.2 33 52-85 160-192 (464)
83 1vyh_C Platelet-activating fac 72.8 25 0.00087 26.6 8.8 33 53-85 191-223 (410)
84 3gre_A Serine/threonine-protei 72.6 7.5 0.00026 29.1 5.7 33 52-84 109-141 (437)
85 3jro_A Fusion protein of prote 72.1 15 0.00051 30.8 7.9 35 52-86 97-133 (753)
86 3odt_A Protein DOA1; ubiquitin 71.9 5.9 0.0002 27.6 4.7 33 52-85 16-48 (313)
87 1pgu_A Actin interacting prote 71.5 30 0.001 26.6 9.0 35 53-87 530-574 (615)
88 3scy_A Hypothetical bacterial 71.5 14 0.00047 27.0 6.8 41 56-96 260-302 (361)
89 2pm7_B Protein transport prote 71.5 7.9 0.00027 27.9 5.4 42 54-96 254-295 (297)
90 4gga_A P55CDC, cell division c 71.2 4.7 0.00016 30.6 4.3 33 53-85 363-395 (420)
91 3iz6_a 40S ribosomal protein R 71.1 6.1 0.00021 29.7 4.9 33 53-85 248-280 (380)
92 2pm9_A Protein WEB1, protein t 71.0 19 0.00063 26.3 7.4 35 53-87 304-339 (416)
93 2ymu_A WD-40 repeat protein; u 70.3 8.6 0.0003 29.8 5.7 32 52-83 14-45 (577)
94 3v7d_B Cell division control p 69.6 7.9 0.00027 29.3 5.2 33 53-85 309-341 (464)
95 2ymu_A WD-40 repeat protein; u 69.1 37 0.0013 26.2 9.5 71 6-84 12-87 (577)
96 2vdu_B TRNA (guanine-N(7)-)-me 68.9 16 0.00055 27.9 6.9 43 54-96 307-351 (450)
97 3gre_A Serine/threonine-protei 68.8 7.7 0.00026 29.1 5.0 33 53-85 62-95 (437)
98 3bws_A Protein LP49; two-domai 68.7 16 0.00054 27.1 6.6 34 52-85 167-200 (433)
99 3vu4_A KMHSV2; beta-propeller 68.1 8.7 0.0003 28.7 5.1 34 52-85 193-227 (355)
100 2hes_X YDR267CP; beta-propelle 67.9 32 0.0011 25.0 9.4 33 53-85 152-184 (330)
101 3hfq_A Uncharacterized protein 67.6 17 0.0006 26.2 6.6 40 55-94 286-326 (347)
102 3mkq_A Coatomer beta'-subunit; 67.6 21 0.00073 29.0 7.6 72 8-86 11-87 (814)
103 3vu4_A KMHSV2; beta-propeller 67.2 13 0.00045 27.7 6.0 34 53-86 239-272 (355)
104 2xzm_R RACK1; ribosome, transl 67.2 16 0.00054 26.8 6.3 33 53-85 212-244 (343)
105 3lrv_A PRE-mRNA-splicing facto 67.1 8 0.00027 28.3 4.7 33 54-86 125-159 (343)
106 4aez_A CDC20, WD repeat-contai 67.0 9.2 0.00031 28.7 5.1 34 53-86 348-381 (401)
107 4gqb_B Methylosome protein 50; 66.9 38 0.0013 25.4 9.0 34 53-86 168-202 (344)
108 3fm0_A Protein CIAO1; WDR39,SG 66.6 36 0.0012 25.0 10.1 35 52-86 59-93 (345)
109 1erj_A Transcriptional repress 65.7 10 0.00035 28.6 5.1 33 53-85 255-287 (393)
110 2pbi_B Guanine nucleotide-bind 65.7 11 0.00038 28.1 5.3 34 52-85 62-95 (354)
111 4e54_B DNA damage-binding prot 65.0 9.7 0.00033 29.1 4.9 33 52-84 162-195 (435)
112 4ggc_A P55CDC, cell division c 64.8 13 0.00044 26.0 5.2 33 53-85 66-98 (318)
113 3nvq_A Semaphorin-7A; beta-pro 64.2 26 0.00089 30.2 7.9 30 52-81 416-445 (590)
114 3ei3_B DNA damage-binding prot 63.7 12 0.0004 27.5 5.0 35 52-86 71-106 (383)
115 2oit_A Nucleoporin 214KDA; NH2 63.5 6.4 0.00022 31.0 3.7 33 53-85 91-127 (434)
116 3ol2_B Plexin-B1; beta-propell 62.5 12 0.0004 31.8 5.3 28 53-80 433-461 (528)
117 3lrv_A PRE-mRNA-splicing facto 61.2 44 0.0015 24.2 8.7 33 54-86 170-202 (343)
118 1p22_A F-BOX/WD-repeat protein 61.2 23 0.00079 26.8 6.4 31 53-85 255-285 (435)
119 3al9_A Plexin-A2; beta-propell 60.2 18 0.00061 30.5 6.0 27 54-80 449-476 (539)
120 3jro_A Fusion protein of prote 59.2 49 0.0017 27.6 8.6 34 53-86 203-239 (753)
121 4aez_A CDC20, WD repeat-contai 58.1 55 0.0019 24.3 10.3 34 52-87 174-207 (401)
122 4h5i_A Guanine nucleotide-exch 58.1 15 0.00051 27.6 4.8 33 53-85 268-300 (365)
123 1p22_A F-BOX/WD-repeat protein 57.9 46 0.0016 25.0 7.6 22 65-86 222-243 (435)
124 2xyi_A Probable histone-bindin 57.7 18 0.00062 27.5 5.3 33 53-85 377-410 (430)
125 1jof_A Carboxy-CIS,CIS-muconat 56.3 17 0.00058 27.0 4.8 67 2-87 3-71 (365)
126 3dm0_A Maltose-binding peripla 54.6 37 0.0013 27.6 7.0 33 52-84 470-502 (694)
127 2oiz_A Aromatic amine dehydrog 54.2 28 0.00096 26.3 5.8 37 57-96 307-343 (361)
128 4e54_B DNA damage-binding prot 53.8 12 0.0004 28.6 3.6 33 53-85 295-327 (435)
129 3sfz_A APAF-1, apoptotic pepti 52.9 35 0.0012 29.5 6.8 33 53-85 1126-1158(1249)
130 1jof_A Carboxy-CIS,CIS-muconat 52.8 52 0.0018 24.3 7.0 31 55-85 193-224 (365)
131 4a0p_A LRP6, LRP-6, low-densit 52.3 96 0.0033 26.0 9.3 75 11-88 340-421 (628)
132 1pby_B Quinohemoprotein amine 52.2 23 0.00078 24.8 4.7 32 54-85 279-310 (337)
133 2bt9_A Lectin; sugar recogniti 52.0 7.5 0.00026 25.9 2.0 26 2-29 16-41 (90)
134 1nr0_A Actin interacting prote 52.0 22 0.00075 28.7 5.1 34 52-85 322-355 (611)
135 3bws_A Protein LP49; two-domai 51.8 25 0.00087 26.0 5.1 31 54-84 400-431 (433)
136 2oit_A Nucleoporin 214KDA; NH2 50.0 22 0.00076 27.8 4.8 33 54-86 149-182 (434)
137 4gq1_A NUP37; propeller, trans 49.2 22 0.00074 26.9 4.5 34 53-86 135-176 (393)
138 3f7f_A Nucleoporin NUP120; nuc 48.3 48 0.0016 29.4 7.0 75 4-86 174-251 (729)
139 2ojh_A Uncharacterized protein 48.1 40 0.0014 22.7 5.3 39 53-91 171-210 (297)
140 2j04_B YDR362CP, TAU91; beta p 46.3 32 0.0011 28.0 5.3 34 52-85 306-342 (524)
141 4gga_A P55CDC, cell division c 45.7 34 0.0012 25.7 5.1 33 53-85 146-178 (420)
142 4fww_A Macrophage-stimulating 45.5 11 0.00036 31.2 2.3 25 55-80 455-479 (527)
143 3p5b_L Low density lipoprotein 44.1 1.1E+02 0.0037 23.7 8.2 71 11-84 112-189 (400)
144 1q7f_A NHL, brain tumor CG1071 43.0 39 0.0013 23.6 4.8 29 56-85 252-280 (286)
145 1q7f_A NHL, brain tumor CG1071 42.5 68 0.0023 22.3 6.0 37 55-93 207-244 (286)
146 3s94_A LRP-6, low-density lipo 42.2 1.4E+02 0.0048 24.9 8.7 66 12-84 350-422 (619)
147 1ofz_A Fucose-specific lectin; 41.3 20 0.0007 28.1 3.3 23 3-26 77-99 (312)
148 3oky_A Plexin-A2; transmembran 41.3 30 0.001 30.2 4.6 29 53-81 447-476 (681)
149 1jmx_B Amine dehydrogenase; ox 40.6 39 0.0013 23.8 4.4 31 55-85 295-325 (349)
150 2bt9_A Lectin; sugar recogniti 39.2 18 0.00062 24.0 2.3 23 3-27 62-84 (90)
151 2ojh_A Uncharacterized protein 37.4 90 0.0031 20.9 5.8 37 54-90 128-165 (297)
152 2ovr_B FBW7, F-BOX/WD repeat p 37.4 53 0.0018 24.7 5.0 29 54-84 159-187 (445)
153 2qe8_A Uncharacterized protein 37.3 30 0.001 25.6 3.5 27 57-83 250-276 (343)
154 3fvz_A Peptidyl-glycine alpha- 35.9 90 0.0031 22.7 6.0 28 57-84 198-226 (329)
155 3azo_A Aminopeptidase; POP fam 35.8 97 0.0033 24.6 6.5 33 57-90 296-328 (662)
156 1nir_A Nitrite reductase; hemo 35.3 60 0.0021 26.3 5.3 28 57-84 181-208 (543)
157 4gq1_A NUP37; propeller, trans 34.4 54 0.0019 24.6 4.6 35 52-86 184-219 (393)
158 1l0q_A Surface layer protein; 33.6 70 0.0024 23.1 5.0 32 54-85 199-233 (391)
159 3vgz_A Uncharacterized protein 33.1 90 0.0031 22.0 5.4 30 56-85 232-262 (353)
160 1l0q_A Surface layer protein; 32.9 82 0.0028 22.8 5.3 32 54-85 243-275 (391)
161 1oqk_A Conserved protein MTH11 32.4 26 0.00088 23.2 2.2 21 56-76 33-53 (97)
162 1ofz_A Fucose-specific lectin; 32.0 35 0.0012 26.7 3.3 25 3-27 24-48 (312)
163 3u4y_A Uncharacterized protein 32.0 67 0.0023 22.6 4.6 35 54-88 127-163 (331)
164 3vgz_A Uncharacterized protein 30.2 53 0.0018 23.2 3.7 31 55-85 185-215 (353)
165 4a0p_A LRP6, LRP-6, low-densit 30.0 2.4E+02 0.0083 23.5 8.8 66 12-84 38-110 (628)
166 2xzh_A Clathrin heavy chain 1; 29.9 88 0.003 25.6 5.4 34 53-86 258-291 (365)
167 3u4y_A Uncharacterized protein 28.7 97 0.0033 21.7 4.9 28 59-86 44-72 (331)
168 1rwi_B Serine/threonine-protei 27.9 63 0.0022 22.0 3.7 32 55-86 234-265 (270)
169 3oky_B Putative uncharacterize 27.8 50 0.0017 28.3 3.7 28 54-81 469-496 (565)
170 2oaj_A Protein SNI1; WD40 repe 27.1 67 0.0023 27.8 4.4 32 54-85 98-129 (902)
171 1ijq_A LDL receptor, low-densi 26.7 1.2E+02 0.0042 22.3 5.4 37 57-95 166-203 (316)
172 3e5z_A Putative gluconolactona 26.4 1.1E+02 0.0036 21.5 4.8 33 56-88 173-205 (296)
173 2w18_A PALB2, fancn, partner a 26.3 67 0.0023 25.8 4.1 29 55-83 326-355 (356)
174 3sjl_D Methylamine dehydrogena 26.2 1.2E+02 0.0041 24.2 5.5 31 55-85 331-363 (386)
175 1yr2_A Prolyl oligopeptidase; 25.9 2.3E+02 0.0078 23.4 7.4 34 55-89 364-397 (741)
176 2mad_H Methylamine dehydrogena 25.9 81 0.0028 24.2 4.4 30 56-85 319-350 (373)
177 1ijq_A LDL receptor, low-densi 25.8 2E+02 0.0068 21.1 9.0 29 56-84 78-107 (316)
178 2xz8_A Peptidoglycan-recogniti 25.6 33 0.0011 24.3 1.9 13 5-17 74-86 (150)
179 3v64_C Agrin; beta propeller, 25.5 1.1E+02 0.0038 23.1 5.0 28 57-84 205-233 (349)
180 2j04_A TAU60, YPL007P, hypothe 25.0 97 0.0033 26.6 5.0 31 56-86 131-161 (588)
181 3c75_H MADH, methylamine dehyd 24.5 83 0.0028 25.3 4.3 31 56-86 371-403 (426)
182 3p5b_L Low density lipoprotein 24.3 1.3E+02 0.0045 23.2 5.4 37 56-94 247-284 (400)
183 2oaj_A Protein SNI1; WD40 repe 24.2 82 0.0028 27.3 4.5 30 54-83 17-46 (902)
184 1jmx_B Amine dehydrogenase; ox 23.8 1.2E+02 0.004 21.2 4.6 28 56-85 256-284 (349)
185 3m0c_C LDL receptor, low-densi 23.6 3.4E+02 0.011 23.6 8.3 30 55-84 471-501 (791)
186 3dsm_A Uncharacterized protein 23.3 79 0.0027 23.2 3.7 37 55-93 267-308 (328)
187 1ts9_A Ribonuclease P protein 23.2 94 0.0032 20.7 3.7 20 56-75 32-51 (102)
188 1cru_A Protein (soluble quinop 22.7 2.9E+02 0.0099 21.9 7.6 33 55-87 405-444 (454)
189 3sov_A LRP-6, low-density lipo 22.7 1.4E+02 0.0047 22.4 5.0 34 58-93 169-203 (318)
190 3v64_C Agrin; beta propeller, 21.8 2.6E+02 0.0087 21.0 8.7 52 26-84 94-146 (349)
191 3qqz_A Putative uncharacterize 21.8 1.8E+02 0.0061 21.7 5.5 40 53-93 25-64 (255)
192 1v76_A RNAse P protein PH1771P 21.7 1.1E+02 0.0038 20.0 3.8 18 56-73 34-51 (96)
193 2php_A Uncharacterized protein 21.7 1.2E+02 0.0042 22.3 4.4 37 79-115 147-184 (192)
194 3sov_A LRP-6, low-density lipo 21.6 1.5E+02 0.005 22.2 5.0 29 56-84 80-109 (318)
195 3fvz_A Peptidyl-glycine alpha- 21.4 2E+02 0.007 20.7 5.7 35 56-92 144-180 (329)
196 3qqz_A Putative uncharacterize 21.4 1.2E+02 0.0042 22.6 4.5 31 54-84 120-150 (255)
197 2f2l_A Peptidoglycan-recogniti 21.3 44 0.0015 23.7 1.9 11 5-15 67-77 (167)
198 1bpo_A Protein (clathrin); cla 21.2 1.5E+02 0.0052 25.2 5.4 34 53-86 257-290 (494)
199 3o4h_A Acylamino-acid-releasin 20.7 1.1E+02 0.0036 24.1 4.1 30 54-83 21-51 (582)
200 3rhe_A NAD-dependent benzaldeh 20.4 90 0.0031 20.4 3.2 21 2-22 105-126 (148)
201 3dr2_A Exported gluconolactona 20.1 1.1E+02 0.0038 21.8 3.9 30 58-87 191-226 (305)
202 1lba_A T7 lysozyme; hydrolase( 20.1 45 0.0015 22.8 1.6 24 5-28 44-67 (146)
No 1
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.38 E-value=0.14 Score=36.20 Aligned_cols=45 Identities=7% Similarity=0.223 Sum_probs=38.0
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCCCCceeeEEEecH
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSE 98 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g~~~~~v~s~s~ 98 (115)
...+|..+...+..+.|.+-+.+++|++|++..++ .+..+..++.
T Consensus 305 h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~-~~~~~~~~~~ 349 (351)
T 3f3f_A 305 HNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN-EFKCMSVITA 349 (351)
T ss_dssp TSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS-CEEEEEEEC-
T ss_pred ccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc-chhheeehcc
Confidence 46789999999999999999999999999997643 6777777764
No 2
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=91.94 E-value=0.5 Score=33.25 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=33.4
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCCCCc
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYERGQG 89 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g~~ 89 (115)
+..++|..|..++..+.|.+=+.+++|++|++......
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 46 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN 46 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC
T ss_pred ccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc
Confidence 46789999999999999999999999999999765433
No 3
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=91.62 E-value=1.4 Score=31.82 Aligned_cols=35 Identities=20% Similarity=0.108 Sum_probs=31.3
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCCC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYERG 87 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g 87 (115)
....|..+..++..+.|++-+.++.|++|++...+
T Consensus 255 ~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 255 FPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp CSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred CCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 56789999999999999999999999999997543
No 4
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=91.60 E-value=0.89 Score=33.21 Aligned_cols=34 Identities=12% Similarity=-0.016 Sum_probs=30.7
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
...+|..+++.+..+.|++-+.++.|.+|++...
T Consensus 333 ~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 333 HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 5678999999999999999999999999999754
No 5
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.27 E-value=1.5 Score=31.37 Aligned_cols=35 Identities=9% Similarity=0.165 Sum_probs=30.6
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
.....|..+++.+..+.|+|=+.+++|++|++..+
T Consensus 304 ~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 304 AEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 35678999999999999999999999999999653
No 6
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=91.04 E-value=1.6 Score=31.83 Aligned_cols=34 Identities=12% Similarity=0.060 Sum_probs=30.1
Q ss_pred cCCCceeEEEEeC-CCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDN-SRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~-sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
....+|..+...+ ..++|.+-+.+++|++|++..
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 131 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT 131 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTT
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCC
Confidence 3578899999998 788999999999999999964
No 7
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=90.70 E-value=0.45 Score=41.57 Aligned_cols=30 Identities=13% Similarity=0.357 Sum_probs=26.3
Q ss_pred ccCCCceeEEEEeCCCceEEEecCCCeEEE
Q psy7671 51 ITQEDSLAQICIDNSRNVLYTRSELGLISV 80 (115)
Q Consensus 51 ~~~~~~I~qi~vD~sR~lLYtLs~~s~I~v 80 (115)
+....+|..|.+|.+++-||..+++..++|
T Consensus 466 ~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 466 FREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred cCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 356789999999999999999999987765
No 8
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=90.21 E-value=1.3 Score=31.98 Aligned_cols=32 Identities=9% Similarity=0.025 Sum_probs=29.0
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEec
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg 84 (115)
..+.|..+.+.+..+.|.+-+.++.|++|++.
T Consensus 141 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 141 IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred cCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 46789999999999999999999999999973
No 9
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=90.16 E-value=1.9 Score=32.68 Aligned_cols=35 Identities=11% Similarity=0.134 Sum_probs=31.9
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
+..++|..++..+..+.|.+=|.+++|+||+|..+
T Consensus 310 gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 310 AHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred cccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 35678999999999999999999999999999765
No 10
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=90.13 E-value=1.1 Score=33.21 Aligned_cols=34 Identities=9% Similarity=0.146 Sum_probs=30.6
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
+..++|..+.+.+...+|.+=+.+++|++|++..
T Consensus 74 ~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~ 107 (343)
T 2xzm_R 74 GHNHFVSDLALSQENCFAISSSWDKTLRLWDLRT 107 (343)
T ss_dssp CCSSCEEEEEECSSTTEEEEEETTSEEEEEETTS
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 4567899999999999999999999999999964
No 11
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=89.69 E-value=3.6 Score=29.32 Aligned_cols=34 Identities=18% Similarity=0.110 Sum_probs=30.6
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...++|..+.+++..+.|++-+.+++|.+|++..
T Consensus 72 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 72 GHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred hcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 3577899999999999999999999999999964
No 12
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=89.45 E-value=1.4 Score=31.58 Aligned_cols=35 Identities=14% Similarity=0.293 Sum_probs=31.0
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
....+|..+...+..+.|++-+.+++|++|++...
T Consensus 84 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 118 (368)
T 3mmy_A 84 MHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN 118 (368)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred cccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC
Confidence 35778999999999999999999999999999643
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=89.39 E-value=2 Score=31.57 Aligned_cols=34 Identities=6% Similarity=0.045 Sum_probs=30.6
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
+...+|..+.+.+..+.|.+=+.+++|++|++..
T Consensus 63 ~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~ 96 (319)
T 3frx_A 63 GHSHIVQDCTLTADGAYALSASWDKTLRLWDVAT 96 (319)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCcccEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 4577899999999999999999999999999964
No 14
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=89.22 E-value=1.4 Score=31.83 Aligned_cols=35 Identities=9% Similarity=0.091 Sum_probs=30.9
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
....+|..+.+++..+.|++-+.++.|++|++...
T Consensus 200 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 200 SSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 34678999999999999999999999999999643
No 15
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=89.06 E-value=1.9 Score=30.94 Aligned_cols=31 Identities=13% Similarity=0.162 Sum_probs=28.6
Q ss_pred CCceeEEEEeCCCceEEEecCCCeEEEEEec
Q psy7671 54 EDSLAQICIDNSRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg 84 (115)
..+|..+...+..+.|.+-+.++.|.+|++-
T Consensus 335 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 335 GAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 5889999999999999999999999999973
No 16
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=88.72 E-value=1.8 Score=30.97 Aligned_cols=34 Identities=9% Similarity=0.004 Sum_probs=29.7
Q ss_pred cCCCceeEEEEeCCCceEE-EecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLY-TRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLY-tLs~~s~I~vy~Lg~ 85 (115)
...++|..++..+..+.|. +-+.++.|++|++..
T Consensus 319 ~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 319 LSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred cCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 4577899999999988887 899999999999964
No 17
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=88.68 E-value=3.3 Score=29.59 Aligned_cols=32 Identities=25% Similarity=0.382 Sum_probs=29.0
Q ss_pred CCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 54 EDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..+|..+.+.+..+.|++-+.++.|.+|++..
T Consensus 251 ~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 251 AYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp CCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred ceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 34899999999999999999999999999964
No 18
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=87.98 E-value=0.91 Score=33.25 Aligned_cols=33 Identities=9% Similarity=0.283 Sum_probs=29.7
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...+|..+.+.+..+.|++-+.++.|.+|++..
T Consensus 246 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 278 (425)
T 1r5m_A 246 HHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN 278 (425)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEECSSS
T ss_pred CCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 467899999999999999999999999999864
No 19
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=87.66 E-value=2.5 Score=30.23 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=30.8
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
....+|..+.+.+..+.|.+-+.+++|.+|++..
T Consensus 313 ~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 313 GHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 3567899999999999999999999999999964
No 20
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=87.65 E-value=2.8 Score=31.09 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=30.4
Q ss_pred CCCceeEEEEeCCCc-eEEEecCCCeEEEEEecCCC
Q psy7671 53 QEDSLAQICIDNSRN-VLYTRSELGLISVYDLYERG 87 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~-lLYtLs~~s~I~vy~Lg~~g 87 (115)
...+|..+..++..+ +|++=+.++.|++|++....
T Consensus 289 ~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 289 FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 356899999998888 99999999999999997643
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=87.33 E-value=4.4 Score=29.03 Aligned_cols=35 Identities=11% Similarity=0.266 Sum_probs=31.1
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
....+|..++..+..+.|.+-+.+++|++|++...
T Consensus 63 ~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~ 97 (312)
T 4ery_A 63 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG 97 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred cCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC
Confidence 35678999999999999999999999999999643
No 22
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=87.25 E-value=0.99 Score=40.70 Aligned_cols=80 Identities=19% Similarity=0.098 Sum_probs=46.0
Q ss_pred EEEecCCCCEEEEEEecCCC-ccccccceEEecCC--cccccchhh-hhhhccCCCceeEEEEeCCCceEEEecCCCeEE
Q psy7671 4 VFMGGTDGNLYEIKYQRDAS-WFSASCSKVCLTSS--SLTYILPTF-INALITQEDSLAQICIDNSRNVLYTRSELGLIS 79 (115)
Q Consensus 4 IF~gG~DG~lyEl~Y~~~~~-Wf~~kc~kinhT~~--~~ssllPs~-~~~~~~~~~~I~qi~vD~sR~lLYtLs~~s~I~ 79 (115)
+|.+-+||-|--|.-+.+++ | .....|+.+. .+..++|.. ..........++.++.=+....|+||+.+.+++
T Consensus 186 lvVsL~DGgLLrL~r~~~d~~~---~~~~f~~~s~l~sL~~l~~~~~~~~~~~~~~~~vs~~~~~~~~~lftL~~D~~LR 262 (1139)
T 4fhn_B 186 ICVSFFNGGLTKIILNPKDASH---YEQHIDDSSYLFSLKKYLSLQAFKADYRSPNTIISMIFLSTYNVLVMLSLDYKLK 262 (1139)
T ss_dssp EEEEETTSCEEEEEEETTEEEE---EEEC---------------------CCCCTTCBSCCEEETTTTEEEEEBTTCEEE
T ss_pred EEEEECCCCEEEEEecCCCCCC---ceeeecCCcHHhhhhhhcccccCCccCCCcceeEEeeccCCccEEEEEeCCCEEE
Confidence 55666899999998876654 5 2233454432 223345521 000112445677777777888999999999999
Q ss_pred EEEecCC
Q psy7671 80 VYDLYER 86 (115)
Q Consensus 80 vy~Lg~~ 86 (115)
+|++..+
T Consensus 263 iWsl~t~ 269 (1139)
T 4fhn_B 263 VLDLSTN 269 (1139)
T ss_dssp EEETTTT
T ss_pred EEECCCC
Confidence 9999764
No 23
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=86.94 E-value=2.3 Score=30.31 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=30.7
Q ss_pred cCCCceeEEEEeCC-CceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNS-RNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~s-R~lLYtLs~~s~I~vy~Lg~~ 86 (115)
+..++|..|++.+. .++|.|=+.+++|++|++...
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~ 71 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRD 71 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCS
T ss_pred CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 46789999999976 589999999999999999754
No 24
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=86.59 E-value=2.9 Score=31.67 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=30.7
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
+..+.|..+++.+..+.|.+=+.+++|++|++..
T Consensus 125 ~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 125 EHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 4578899999999999999999999999999964
No 25
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=86.49 E-value=5.2 Score=28.99 Aligned_cols=35 Identities=9% Similarity=0.215 Sum_probs=31.2
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
..++.|..+++.+..+.|.+=+.+++|++|++..+
T Consensus 95 ~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT
T ss_pred CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC
Confidence 35678999999999999999999999999999654
No 26
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=86.27 E-value=1 Score=32.92 Aligned_cols=29 Identities=14% Similarity=0.018 Sum_probs=27.7
Q ss_pred ceeEEEEeCCCceEEEecCCCeEEEEEec
Q psy7671 56 SLAQICIDNSRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 56 ~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg 84 (115)
+|..+...+..+.|++-+.++.|.+|++.
T Consensus 396 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 396 YIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ceEEEEccCCCceEEEEecCceEEEEeec
Confidence 99999999999999999999999999984
No 27
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=85.65 E-value=6.3 Score=28.18 Aligned_cols=33 Identities=15% Similarity=0.336 Sum_probs=29.9
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..++|..+..++..+.|.+=+.+++|++|++..
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 180 (312)
T 4ery_A 148 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 180 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 457899999999999999999999999999964
No 28
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.38 E-value=5.8 Score=35.30 Aligned_cols=80 Identities=18% Similarity=0.102 Sum_probs=48.3
Q ss_pred EEEecCCCCEEEEEEecCCC-ccccccceEEecCCc--ccccchhhh-hhhccCCCceeEEEEeCCCceEEEecCCCeEE
Q psy7671 4 VFMGGTDGNLYEIKYQRDAS-WFSASCSKVCLTSSS--LTYILPTFI-NALITQEDSLAQICIDNSRNVLYTRSELGLIS 79 (115)
Q Consensus 4 IF~gG~DG~lyEl~Y~~~~~-Wf~~kc~kinhT~~~--~ssllPs~~-~~~~~~~~~I~qi~vD~sR~lLYtLs~~s~I~ 79 (115)
++.+=+||.|-.|.-+.+++ |- -...|..+.. +..++|..- +........++.++.=+....||||+.+.+++
T Consensus 184 l~Vsl~dGgLlrl~r~~~~~~~~---~~~f~~~s~~~sl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lftl~~D~~LR 260 (950)
T 4gq2_M 184 ICVSFFNGGLTKIILNPKDASHY---EQHIDDSSYLFSLKKYLSLQAFKADYRSPNTIISMIFLSTYNVLVMLSLDYKLK 260 (950)
T ss_dssp EEEEETTSCEEEEEEETTTTEEE---EEEECCCCCCCBCC-------CCSSCCCTTCEEEEEEETTTTEEEEEETTCEEE
T ss_pred EEEEECCCCEEEEEecCCCCCcc---eeeecCCcHHHhhhhhcccccCCCCCCCcceEEEEeecCCCcEEEEEECCCEEE
Confidence 45555899999998876655 52 1223333321 234455210 10012345678888777788999999999999
Q ss_pred EEEecCC
Q psy7671 80 VYDLYER 86 (115)
Q Consensus 80 vy~Lg~~ 86 (115)
+|++..+
T Consensus 261 iWsl~t~ 267 (950)
T 4gq2_M 261 VLDLSTN 267 (950)
T ss_dssp EEETTTT
T ss_pred EEECCCC
Confidence 9999754
No 29
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=85.25 E-value=2.9 Score=31.51 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=30.4
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...++|..+.+.+..+.|.+-+.+++|++|++..
T Consensus 137 ~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~ 170 (357)
T 4g56_B 137 EHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ 170 (357)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 3467899999999999999999999999999864
No 30
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=85.23 E-value=1.5 Score=32.16 Aligned_cols=32 Identities=9% Similarity=0.033 Sum_probs=29.8
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEec
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg 84 (115)
....|..+...+..+.|.+-+.+++|++|++.
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 57889999999999999999999999999995
No 31
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=85.19 E-value=2.6 Score=30.94 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=31.0
Q ss_pred cCCCceeEEEEeCC----C---ceEEEecCCCeEEEEEecCCC
Q psy7671 52 TQEDSLAQICIDNS----R---NVLYTRSELGLISVYDLYERG 87 (115)
Q Consensus 52 ~~~~~I~qi~vD~s----R---~lLYtLs~~s~I~vy~Lg~~g 87 (115)
....+|..+...+. . +.|++-+.+++|.+|++....
T Consensus 60 ~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~ 102 (397)
T 1sq9_A 60 VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITRED 102 (397)
T ss_dssp CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECT
T ss_pred cCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCc
Confidence 45678999999988 8 899999999999999997643
No 32
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=84.49 E-value=1.2 Score=31.47 Aligned_cols=32 Identities=0% Similarity=0.138 Sum_probs=29.4
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEec
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg 84 (115)
..++|..|++.+..+.|.|=+.+++|++|++.
T Consensus 283 H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 283 HTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 46789999999999999999999999999984
No 33
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=84.39 E-value=2.6 Score=29.98 Aligned_cols=43 Identities=7% Similarity=0.105 Sum_probs=32.1
Q ss_pred CCceeEEEEeCCCceEEEecCC-CeEEEEEecCCCCceeeEEEe
Q psy7671 54 EDSLAQICIDNSRNVLYTRSEL-GLISVYDLYERGQGFRSLVSL 96 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~~-s~I~vy~Lg~~g~~~~~v~s~ 96 (115)
...+..+++++..+.||+.+.+ +.|.+|++..++..++.+.++
T Consensus 37 ~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (343)
T 1ri6_A 37 PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES 80 (343)
T ss_dssp SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc
Confidence 3456678899999999999887 899999997544455555444
No 34
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=84.36 E-value=1.2 Score=32.71 Aligned_cols=35 Identities=14% Similarity=0.056 Sum_probs=27.5
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
...++|..+.+.+..+.|.+-+.+++|++|++...
T Consensus 53 ~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 53 DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp CCSSCEEEEEECTTTCCEEEEETTSSEEEC-----
T ss_pred cCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Confidence 35678999999999999999999999999999754
No 35
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=83.75 E-value=4.6 Score=30.23 Aligned_cols=33 Identities=21% Similarity=0.260 Sum_probs=29.0
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..+.|..+...+..+.|.|=+.+++|++|++..
T Consensus 153 h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~ 185 (354)
T 2pbi_B 153 HTNYLSACSFTNSDMQILTASGDGTCALWDVES 185 (354)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred cCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC
Confidence 467788889988889999999999999999864
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=83.75 E-value=9.9 Score=27.19 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=30.6
Q ss_pred CCCceeEEEEeCC---CceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNS---RNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~s---R~lLYtLs~~s~I~vy~Lg~~ 86 (115)
...+|..++..+. .+.|.+-+.+++|++|++...
T Consensus 205 h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 4678999999999 899999999999999999764
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=83.73 E-value=6.7 Score=29.00 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=30.5
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
....+|..+++.+..+.|++-+.+++|++|++..
T Consensus 179 ~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 179 GHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT 212 (420)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC
Confidence 3567899999999999999999999999999964
No 38
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=83.42 E-value=3.2 Score=34.69 Aligned_cols=28 Identities=14% Similarity=0.373 Sum_probs=25.1
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEE
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISV 80 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~v 80 (115)
...+|..|.+|..++-||..+++..++|
T Consensus 460 ~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 460 EPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 4579999999999999999999987775
No 39
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=83.31 E-value=4.2 Score=30.59 Aligned_cols=34 Identities=12% Similarity=0.170 Sum_probs=30.4
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
+....|..+.+.+..+.|.|=+.+++|++|++..
T Consensus 342 ~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 342 SHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 3467899999999999999999999999999964
No 40
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=83.08 E-value=9.9 Score=26.68 Aligned_cols=33 Identities=27% Similarity=0.304 Sum_probs=30.0
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..++|..+.+++..+.|++-+.++.|.+|++..
T Consensus 182 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 214 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE 214 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ccCceEEEEECCCCCEEEEEecCCcEEEEECCC
Confidence 467899999999999999999999999999964
No 41
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=83.03 E-value=3.4 Score=30.46 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=29.0
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCCC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYERG 87 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g 87 (115)
..++|..++..+..+.|.+=+.+++|++|++...+
T Consensus 106 h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~ 140 (330)
T 2hes_X 106 HENEVKGVAWSNDGYYLATCSRDKSVWIWETDESG 140 (330)
T ss_dssp ---CEEEEEECTTSCEEEEEETTSCEEEEECCTTC
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCC
Confidence 45789999999999999999999999999996544
No 42
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=82.35 E-value=3.8 Score=31.47 Aligned_cols=34 Identities=9% Similarity=0.092 Sum_probs=29.9
Q ss_pred cCCCceeEEEEeCC---CceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNS---RNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~s---R~lLYtLs~~s~I~vy~Lg~ 85 (115)
....+|..+.+.+. .+.|++=+.+++|++|++..
T Consensus 193 ~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 193 GHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp ECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC
T ss_pred cccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC
Confidence 34678999999998 88999999999999999964
No 43
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=82.26 E-value=7 Score=31.98 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=30.3
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
+....|..+++.+..+.|.+=+.+++|++|++..
T Consensus 428 ~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~ 461 (694)
T 3dm0_A 428 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA 461 (694)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 4567899999999999999999999999999964
No 44
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=82.11 E-value=8.9 Score=28.21 Aligned_cols=34 Identities=24% Similarity=0.360 Sum_probs=30.5
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
...+|..+++.+..+.|.+=+.+++|++|++...
T Consensus 225 h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 4678999999999999999999999999999643
No 45
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=82.08 E-value=7.2 Score=31.02 Aligned_cols=85 Identities=12% Similarity=0.312 Sum_probs=49.8
Q ss_pred ceEEEec-------------CCCCEEEEEEecCCCccccccceEEecCCcc--cccchhhhhhhccCCCceeEEEEeCCC
Q psy7671 2 IVVFMGG-------------TDGNLYEIKYQRDASWFSASCSKVCLTSSSL--TYILPTFINALITQEDSLAQICIDNSR 66 (115)
Q Consensus 2 GRIF~gG-------------~DG~lyEl~Y~~~~~Wf~~kc~kinhT~~~~--ssllPs~~~~~~~~~~~I~qi~vD~sR 66 (115)
|++|++. .+|.||-+.+..+++ +-.++..+...+ ..+-|-=+...-.+.+.+.-.+||..+
T Consensus 61 G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~----~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~ 136 (355)
T 3sre_A 61 GLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEP----AVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG 136 (355)
T ss_dssp SEEEEEECCC-----------CCEEEEEETTSSSC----CEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST
T ss_pred CeEEEEeccccCCCcccCCCCCCeEEEEecCCCCC----ceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC
Confidence 7889885 688999888864433 223444443101 122231000000123456666777753
Q ss_pred ceEEEecCCCeEEEEEecCCCCceeeEEEec
Q psy7671 67 NVLYTRSELGLISVYDLYERGQGFRSLVSLS 97 (115)
Q Consensus 67 ~lLYtLs~~s~I~vy~Lg~~g~~~~~v~s~s 97 (115)
.+++|++|++..++.....+.++.
T Consensus 137 -------~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 137 -------SSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -------TCCEEEEEEEETTTTEEEEEEEEC
T ss_pred -------CCCeEEEEEEECCCCEEEEEeccc
Confidence 579999999998887778877765
No 46
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=82.05 E-value=1.7 Score=31.97 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=29.7
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
+.+++|..+.+++..+.|.|=+.+++|++|++...
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~ 45 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG 45 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETT
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC
Confidence 46789999999999999999999999999999643
No 47
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=81.77 E-value=6.3 Score=28.53 Aligned_cols=72 Identities=13% Similarity=0.132 Sum_probs=48.0
Q ss_pred cCCCCEEEEEEecCCCcc-----ccccceEEecCCcccccchhhhhhhccCCCceeEEEEeCCCceEEEecCCCeEEEEE
Q psy7671 8 GTDGNLYEIKYQRDASWF-----SASCSKVCLTSSSLTYILPTFINALITQEDSLAQICIDNSRNVLYTRSELGLISVYD 82 (115)
Q Consensus 8 G~DG~lyEl~Y~~~~~Wf-----~~kc~kinhT~~~~ssllPs~~~~~~~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~ 82 (115)
|..+.|+-+.++.+..++ .+.++.-|...+.. +.. + -..+.+|..+...+..+.|.+=+.+++|++|+
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~---~~~-~---~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVE---VRS-I---QVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE---EEE-E---ECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCce---eEE-e---eccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 444567888887776664 23344444333221 111 1 13467899999999999999999999999999
Q ss_pred ecCC
Q psy7671 83 LYER 86 (115)
Q Consensus 83 Lg~~ 86 (115)
+...
T Consensus 84 ~~~~ 87 (304)
T 2ynn_A 84 YNTG 87 (304)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 8643
No 48
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=80.85 E-value=6.8 Score=28.92 Aligned_cols=33 Identities=9% Similarity=0.097 Sum_probs=29.7
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
....|..++..+....|.+-+.+++|++|++..
T Consensus 247 h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 247 HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 456799999999999999999999999999964
No 49
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=80.76 E-value=7 Score=29.07 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=30.7
Q ss_pred CceeEEEEeCCCceEEEecCCCeEEEEEecCCCCcee
Q psy7671 55 DSLAQICIDNSRNVLYTRSELGLISVYDLYERGQGFR 91 (115)
Q Consensus 55 ~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g~~~~ 91 (115)
.+|..+..++..+.|.+-+. ++|++|++..++....
T Consensus 286 ~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~ 321 (447)
T 3dw8_B 286 SSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVE 321 (447)
T ss_dssp TCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSC
T ss_pred ceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccc
Confidence 48999999999999999999 9999999976554443
No 50
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=80.73 E-value=4.5 Score=30.17 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=31.5
Q ss_pred cCCCceeEEEEeCCC-ceEEEecCCCeEEEEEecCCC
Q psy7671 52 TQEDSLAQICIDNSR-NVLYTRSELGLISVYDLYERG 87 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR-~lLYtLs~~s~I~vy~Lg~~g 87 (115)
...+.|..++.++.. ++|.+-+.+++|++|++....
T Consensus 224 ~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 224 ELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp GCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred ccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 456789999999997 999999999999999997543
No 51
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=80.58 E-value=7 Score=30.31 Aligned_cols=33 Identities=9% Similarity=0.200 Sum_probs=28.7
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...++|..+...+..+ |.+-+.+++|++|++..
T Consensus 582 ~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 582 AHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp SSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred cCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 3467899999999999 99999999999999964
No 52
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=80.53 E-value=4.2 Score=29.42 Aligned_cols=34 Identities=12% Similarity=0.178 Sum_probs=31.0
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
+..++|..+++++..+.|.|=+.+++|++|++..
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~ 40 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEG 40 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCS
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCC
Confidence 4678999999999999999999999999999964
No 53
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=80.47 E-value=10 Score=27.99 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=30.0
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...+|..++..+..++|.+-+.+++|++|++..
T Consensus 205 h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 205 HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp CSSCCCEEEECTTSCEEEEECTTSCEEEEETTT
T ss_pred cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 467899999999999999999999999999964
No 54
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=80.43 E-value=3.9 Score=30.03 Aligned_cols=41 Identities=10% Similarity=0.186 Sum_probs=30.7
Q ss_pred ceeEEEEeCCCceEEEecCC----CeEEEEEecCCCCceeeEEEe
Q psy7671 56 SLAQICIDNSRNVLYTRSEL----GLISVYDLYERGQGFRSLVSL 96 (115)
Q Consensus 56 ~I~qi~vD~sR~lLYtLs~~----s~I~vy~Lg~~g~~~~~v~s~ 96 (115)
....+++++..+.||+-+++ +.|.+|++..++..++.+.+.
T Consensus 51 ~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~ 95 (361)
T 3scy_A 51 NPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQ 95 (361)
T ss_dssp CCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEE
T ss_pred CCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEe
Confidence 44457888899999999985 799999998764455555543
No 55
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=80.14 E-value=2.7 Score=31.66 Aligned_cols=43 Identities=9% Similarity=0.004 Sum_probs=28.6
Q ss_pred cCCCceeEEEEeC-CCceEEEecCCCeEEEEEecCCCCceeeEE
Q psy7671 52 TQEDSLAQICIDN-SRNVLYTRSELGLISVYDLYERGQGFRSLV 94 (115)
Q Consensus 52 ~~~~~I~qi~vD~-sR~lLYtLs~~s~I~vy~Lg~~g~~~~~v~ 94 (115)
+..++|..++.-+ ..++|.|=+.+++|++|++..+|+....+.
T Consensus 309 ~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~~~i~ 352 (357)
T 4g56_B 309 SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTENLIA 352 (357)
T ss_dssp CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----------
T ss_pred CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccccccC
Confidence 4567899999976 577999999999999999988775544443
No 56
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=79.75 E-value=8.5 Score=28.72 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=29.0
Q ss_pred CCCceeEEEEeCCC-ceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSR-NVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR-~lLYtLs~~s~I~vy~Lg~ 85 (115)
..++|..+...+.. ++|++-+.+++|.+|++..
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 163 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT 163 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT
T ss_pred CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC
Confidence 46788899999885 7999999999999999964
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=79.56 E-value=13 Score=25.96 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=31.0
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
....+|..+...+..+.|++-+.+++|.+|++...
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 129 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP 129 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 35678999999999999999999999999999654
No 58
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=79.39 E-value=4.9 Score=28.49 Aligned_cols=42 Identities=17% Similarity=0.146 Sum_probs=32.6
Q ss_pred ceeEEEEeCCCceEEEec-CCCeEEEEEecCCCCceeeEEEec
Q psy7671 56 SLAQICIDNSRNVLYTRS-ELGLISVYDLYERGQGFRSLVSLS 97 (115)
Q Consensus 56 ~I~qi~vD~sR~lLYtLs-~~s~I~vy~Lg~~g~~~~~v~s~s 97 (115)
.+..+++++..+.||+-+ .++.|.+|++...+..++.+.++.
T Consensus 278 ~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~ 320 (343)
T 1ri6_A 278 QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYA 320 (343)
T ss_dssp SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEE
T ss_pred ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccc
Confidence 467889999999888888 579999999987655566666553
No 59
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=78.86 E-value=12 Score=26.67 Aligned_cols=34 Identities=6% Similarity=0.024 Sum_probs=30.6
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
....+|..+..++..+.|++-+.++.|++|++..
T Consensus 159 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 159 GHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred cccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 3567899999999999999999999999999963
No 60
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=78.68 E-value=17 Score=26.64 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=30.2
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
....|..+...+..+.|.+=+.+++|++|++...
T Consensus 96 ~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~ 129 (340)
T 1got_B 96 RSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTCEEEEEETTTC
T ss_pred CCccEEEEEECCCCCEEEEEeCCCeEEEEECccC
Confidence 4567899999999999999999999999999654
No 61
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=78.53 E-value=7.4 Score=27.64 Aligned_cols=39 Identities=18% Similarity=0.317 Sum_probs=33.3
Q ss_pred cCCCceeEEEEeCCC---ceEEEecCCCeEEEEEecCCCCce
Q psy7671 52 TQEDSLAQICIDNSR---NVLYTRSELGLISVYDLYERGQGF 90 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR---~lLYtLs~~s~I~vy~Lg~~g~~~ 90 (115)
...++|..+++.+.. +.|.+=+.+++|++|++...+...
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~ 78 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI 78 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee
Confidence 467899999999994 999999999999999998755443
No 62
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=77.36 E-value=7.1 Score=28.36 Aligned_cols=35 Identities=20% Similarity=0.414 Sum_probs=29.1
Q ss_pred CCceeEEEEeCCCceEEEec-CCCeEEEEEecCCCC
Q psy7671 54 EDSLAQICIDNSRNVLYTRS-ELGLISVYDLYERGQ 88 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs-~~s~I~vy~Lg~~g~ 88 (115)
......+++++..+.||+-+ .+++|.+|++..+|.
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~ 120 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA 120 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSC
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC
Confidence 45677899999999999988 678999999976653
No 63
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=77.09 E-value=13 Score=25.76 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=30.6
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
...+|..+...+..+.|++-+.++.|.+|++...
T Consensus 58 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 91 (313)
T 3odt_A 58 GQGFLNSVCYDSEKELLLFGGKDTMINGVPLFAT 91 (313)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTCC
T ss_pred CCccEEEEEECCCCCEEEEecCCCeEEEEEeeec
Confidence 4678999999999999999999999999999653
No 64
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=76.64 E-value=14 Score=31.94 Aligned_cols=75 Identities=9% Similarity=0.127 Sum_probs=48.8
Q ss_pred EEEecCCCCEEEEEEecCCCccc-----cccceEEecCCcccccchhhhhhhccCCCceeEEEEeCCCceEEEecCCCeE
Q psy7671 4 VFMGGTDGNLYEIKYQRDASWFS-----ASCSKVCLTSSSLTYILPTFINALITQEDSLAQICIDNSRNVLYTRSELGLI 78 (115)
Q Consensus 4 IF~gG~DG~lyEl~Y~~~~~Wf~-----~kc~kinhT~~~~ssllPs~~~~~~~~~~~I~qi~vD~sR~lLYtLs~~s~I 78 (115)
+.+.|..+.|+-+.++.+..++- +.++.-+...+.... .+ -...++|..+++.+..+.|.+-+.+++|
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~---~~----~~h~~~v~~~~~s~~~~~l~s~~~d~~v 681 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL---DI----KAHEDEVLCCAFSSDDSYIATCSADKKV 681 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE---EE----CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEE---Ee----ccCCCCEEEEEEecCCCEEEEEeCCCeE
Confidence 34445566778888877665541 222222322221100 11 1457899999999999999999999999
Q ss_pred EEEEecC
Q psy7671 79 SVYDLYE 85 (115)
Q Consensus 79 ~vy~Lg~ 85 (115)
.+|++..
T Consensus 682 ~vwd~~~ 688 (1249)
T 3sfz_A 682 KIWDSAT 688 (1249)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 9999964
No 65
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=76.46 E-value=20 Score=26.35 Aligned_cols=35 Identities=9% Similarity=0.200 Sum_probs=29.7
Q ss_pred cCCCceeEEEEeCCC-ceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSR-NVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR-~lLYtLs~~s~I~vy~Lg~~ 86 (115)
...+.|..++..+.. ++|.+=+.+++|++|++...
T Consensus 301 ~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 301 AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 356789999999876 69999999999999999754
No 66
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=76.26 E-value=10 Score=28.93 Aligned_cols=35 Identities=3% Similarity=0.089 Sum_probs=30.4
Q ss_pred cCCCceeEEEEeC-CCceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDN-SRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~-sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
.....|..+...+ ..++|.+-+.++.|.+|++...
T Consensus 229 ~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 229 GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 3467899999998 7899999999999999999754
No 67
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=76.07 E-value=5.3 Score=29.89 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=31.8
Q ss_pred cCCCceeEEEEeC-CCceEEEecCCCeEEEEEecCCC
Q psy7671 52 TQEDSLAQICIDN-SRNVLYTRSELGLISVYDLYERG 87 (115)
Q Consensus 52 ~~~~~I~qi~vD~-sR~lLYtLs~~s~I~vy~Lg~~g 87 (115)
+..++|..++..+ ..++|.+=+.+++|++|++...+
T Consensus 79 ~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred cCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 3567899999999 89999999999999999997653
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=75.97 E-value=18 Score=25.57 Aligned_cols=35 Identities=9% Similarity=0.093 Sum_probs=30.3
Q ss_pred cCCCceeEEEEeCCCc-eEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSRN-VLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~-lLYtLs~~s~I~vy~Lg~~ 86 (115)
....+|..+...+... +|.+-+.++.|++|++...
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 3567899999999877 9999999999999999743
No 69
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=75.56 E-value=9.1 Score=27.20 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=31.9
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCCC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYERG 87 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g 87 (115)
...+.|..+.+.+..+.|.+-+.+++|++|++....
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~ 44 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA 44 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTT
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCC
Confidence 356889999999999999999999999999997654
No 70
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=75.24 E-value=15 Score=29.58 Aligned_cols=33 Identities=9% Similarity=0.112 Sum_probs=30.1
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..++|..++..+..+.|.|-+.+++|++|++..
T Consensus 238 h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 238 HSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 467899999999999999999999999999964
No 71
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=75.21 E-value=15 Score=26.73 Aligned_cols=33 Identities=15% Similarity=0.265 Sum_probs=29.9
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEec
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg 84 (115)
+..++|..+.+++..+.|.+=+.+++|++|++.
T Consensus 105 ~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~ 137 (319)
T 3frx_A 105 GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK 137 (319)
T ss_dssp CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 356789999999999999999999999999984
No 72
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=75.13 E-value=17 Score=27.35 Aligned_cols=34 Identities=18% Similarity=0.164 Sum_probs=30.3
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
+..+.|..+...+..+.|++-+.+++|++|++..
T Consensus 163 ~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~ 196 (393)
T 1erj_A 163 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT 196 (393)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC
Confidence 3567899999999999999999999999999864
No 73
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=74.55 E-value=8.1 Score=29.30 Aligned_cols=35 Identities=20% Similarity=0.103 Sum_probs=31.4
Q ss_pred CCCceeEEEEeCCCceEEEecCCCe----EEEEEecCCC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGL----ISVYDLYERG 87 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~----I~vy~Lg~~g 87 (115)
...+|..+..++.+.+|.+=+.+++ |.+|+++.++
T Consensus 406 ~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~~ 444 (445)
T 2ovr_B 406 SGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 444 (445)
T ss_dssp GTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCCC
T ss_pred CCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCCC
Confidence 4678999999999999999999998 9999998764
No 74
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=74.48 E-value=6.2 Score=34.15 Aligned_cols=29 Identities=10% Similarity=0.374 Sum_probs=25.0
Q ss_pred cCCCceeEEEEeCCC--ceEEEecCCCeEEE
Q psy7671 52 TQEDSLAQICIDNSR--NVLYTRSELGLISV 80 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR--~lLYtLs~~s~I~v 80 (115)
....+|..|.+|..+ +.||..+++..++|
T Consensus 447 ~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 447 QDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp TTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred CCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 346789999999998 99999999887776
No 75
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=74.32 E-value=8.9 Score=27.97 Aligned_cols=46 Identities=9% Similarity=0.163 Sum_probs=36.0
Q ss_pred CCceeEEEEeCCCceEEEecCCCeEEEEEecCCCCceeeEEEecHHH
Q psy7671 54 EDSLAQICIDNSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEM 100 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g~~~~~v~s~s~~~ 100 (115)
+++|..++..+..+.|-+=+.+++|++|++..+| ....+..+...+
T Consensus 262 ~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g-~~~~~~~~~~~~ 307 (316)
T 3bg1_A 262 NDVVWHVSWSITANILAVSGGDNKVTLWKESVDG-QWVCISDVNKGQ 307 (316)
T ss_dssp SSCEEEEEECTTTCCEEEEESSSCEEEEEECTTS-CEEEEEECC---
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCC-cEEEeeeccCCC
Confidence 5678899999999999999999999999998765 456666666443
No 76
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=74.22 E-value=9.5 Score=28.01 Aligned_cols=34 Identities=12% Similarity=0.186 Sum_probs=30.5
Q ss_pred CCCceeEEEEeCCCc-eEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNSRN-VLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~-lLYtLs~~s~I~vy~Lg~~ 86 (115)
....|..+++.+..+ +|++=+.+++|++|++...
T Consensus 203 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 237 (383)
T 3ei3_B 203 HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNI 237 (383)
T ss_dssp SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGC
T ss_pred CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCC
Confidence 467899999999988 9999999999999999763
No 77
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=73.90 E-value=6.1 Score=28.89 Aligned_cols=33 Identities=12% Similarity=0.228 Sum_probs=30.3
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...+|..+...+..+.|++-+.++.|++|++..
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 567899999999999999999999999999954
No 78
>1xks_A Nuclear pore complex protein NUP133; beta-propeller, helical insertions, protein transport; 2.35A {Homo sapiens} SCOP: b.69.14.1
Probab=73.70 E-value=37 Score=28.05 Aligned_cols=47 Identities=15% Similarity=0.286 Sum_probs=33.3
Q ss_pred eEEEEeCCCceEEEecCCCeEEEEEecCCCCceeeEEEecHHHHHHHHHh
Q psy7671 58 AQICIDNSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQALK 107 (115)
Q Consensus 58 ~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g~~~~~v~s~s~~~i~~~a~~ 107 (115)
+.+.-+.....+|+|++.+ |+.|++ .+| ..+.+....-.++.+++..
T Consensus 211 v~~~~~~g~r~v~ilT~~~-lq~W~l-~~~-~e~~~~~~di~~~i~~~l~ 257 (450)
T 1xks_A 211 SSVLWDRERSSFYSLTSSN-ISKWEL-DDS-SEKHAYSWDINRALKENIT 257 (450)
T ss_dssp EEEEEETTTTEEEEEESSE-EEEEEE-CSS-CEEEEEEEEHHHHHHHHHH
T ss_pred EEeccCCCcEEEEEEcCCc-eEEEEe-cCC-CceEEEeecHHHHHHHHHH
Confidence 4455555556899999955 999999 555 4466688877677766654
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=73.42 E-value=23 Score=28.75 Aligned_cols=34 Identities=9% Similarity=0.216 Sum_probs=30.8
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
..++|..+...+..+.|.+-+.+++|++|++..+
T Consensus 96 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 96 HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT
T ss_pred CCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC
Confidence 5678999999999999999999999999999754
No 80
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=73.26 E-value=14 Score=28.09 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=30.3
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
+..++|..+.+++..++|.+=+.+++|++|++..
T Consensus 148 ~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 3567899999999999999999999999999853
No 81
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=73.24 E-value=7.7 Score=28.46 Aligned_cols=34 Identities=9% Similarity=0.237 Sum_probs=30.8
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...++|..+...+..++|.+=+.+++|++|++..
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~ 98 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNE 98 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSS
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeeccc
Confidence 3467899999999999999999999999999976
No 82
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=73.18 E-value=8.7 Score=29.05 Aligned_cols=33 Identities=12% Similarity=0.206 Sum_probs=27.6
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
+..++|..+...+.. .|.+=+.+++|++|++..
T Consensus 160 ~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 160 GHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp CCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT
T ss_pred CCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC
Confidence 356788889887665 899999999999999964
No 83
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=72.85 E-value=25 Score=26.64 Aligned_cols=33 Identities=9% Similarity=0.234 Sum_probs=29.8
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
....|..+.+.+..+.|.+-+.+++|++|++..
T Consensus 191 h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~ 223 (410)
T 1vyh_C 191 HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 223 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 456899999999999999999999999999964
No 84
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=72.64 E-value=7.5 Score=29.15 Aligned_cols=33 Identities=18% Similarity=0.171 Sum_probs=30.3
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEec
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg 84 (115)
....+|..|++.+..+.|.+-+.+++|++|++.
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~ 141 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVN 141 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEec
Confidence 347789999999999999999999999999996
No 85
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=72.08 E-value=15 Score=30.77 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=31.1
Q ss_pred cCCCceeEEEEeCC--CceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNS--RNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~s--R~lLYtLs~~s~I~vy~Lg~~ 86 (115)
....+|..+.+.+. .+.|++-+.+++|.+|++...
T Consensus 97 ~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 97 VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred CCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 35678999999998 899999999999999999755
No 86
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=71.90 E-value=5.9 Score=27.62 Aligned_cols=33 Identities=6% Similarity=0.163 Sum_probs=28.9
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
+..++|..++. +..+.|.+-+.+++|++|++..
T Consensus 16 ~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~ 48 (313)
T 3odt_A 16 GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDD 48 (313)
T ss_dssp CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESS
T ss_pred CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCC
Confidence 45789999999 7888899999999999999943
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=71.49 E-value=30 Score=26.64 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=31.5
Q ss_pred CCCceeEEEEeC----------CCceEEEecCCCeEEEEEecCCC
Q psy7671 53 QEDSLAQICIDN----------SRNVLYTRSELGLISVYDLYERG 87 (115)
Q Consensus 53 ~~~~I~qi~vD~----------sR~lLYtLs~~s~I~vy~Lg~~g 87 (115)
...+|..++..+ ..++|.+-+.+++|++|++...+
T Consensus 530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 574 (615)
T 1pgu_A 530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM 574 (615)
T ss_dssp CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT
T ss_pred CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc
Confidence 567899999999 89999999999999999997653
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=71.48 E-value=14 Score=27.02 Aligned_cols=41 Identities=12% Similarity=0.227 Sum_probs=30.1
Q ss_pred ceeEEEEeCCCceEEEecCC--CeEEEEEecCCCCceeeEEEe
Q psy7671 56 SLAQICIDNSRNVLYTRSEL--GLISVYDLYERGQGFRSLVSL 96 (115)
Q Consensus 56 ~I~qi~vD~sR~lLYtLs~~--s~I~vy~Lg~~g~~~~~v~s~ 96 (115)
....+++++..+.||+-... ++|.+|++...+..++.+..+
T Consensus 260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEE
T ss_pred CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEe
Confidence 34689999999999987765 899999997543344444443
No 89
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=71.47 E-value=7.9 Score=27.91 Aligned_cols=42 Identities=17% Similarity=0.117 Sum_probs=32.3
Q ss_pred CCceeEEEEeCCCceEEEecCCCeEEEEEecCCCCceeeEEEe
Q psy7671 54 EDSLAQICIDNSRNVLYTRSELGLISVYDLYERGQGFRSLVSL 96 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g~~~~~v~s~ 96 (115)
++.|..+...+..+.|.+=+.+++|++|+...+| ....+.++
T Consensus 254 ~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g-~w~~~~~~ 295 (297)
T 2pm7_B 254 PDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG-KWEPAGEV 295 (297)
T ss_dssp SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS-CEEEC---
T ss_pred CCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCC-cEEecccc
Confidence 4568889999999999999999999999998765 34444444
No 90
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=71.23 E-value=4.7 Score=30.60 Aligned_cols=33 Identities=3% Similarity=0.171 Sum_probs=30.1
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..++|..|++.+..+.|.|=+.+++|++|++-.
T Consensus 363 H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 363 HTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 467899999999999999999999999999954
No 91
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=71.09 E-value=6.1 Score=29.68 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=30.0
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...+|..+.+.+..+.|.|=+.+++|++|++..
T Consensus 248 h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 248 HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 456899999999999999999999999999964
No 92
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=71.03 E-value=19 Score=26.34 Aligned_cols=35 Identities=11% Similarity=-0.051 Sum_probs=30.1
Q ss_pred CCCceeEEEEeCCC-ceEEEecCCCeEEEEEecCCC
Q psy7671 53 QEDSLAQICIDNSR-NVLYTRSELGLISVYDLYERG 87 (115)
Q Consensus 53 ~~~~I~qi~vD~sR-~lLYtLs~~s~I~vy~Lg~~g 87 (115)
...+|..+...+.. ++|.+-+.+++|++|++....
T Consensus 304 ~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 304 RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 45678889999887 899999999999999997643
No 93
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=70.29 E-value=8.6 Score=29.84 Aligned_cols=32 Identities=6% Similarity=0.194 Sum_probs=29.4
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEe
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDL 83 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~L 83 (115)
+..++|..|++.+..++|.|=+.+++|++|++
T Consensus 14 GH~~~V~~~a~spdg~~las~~~d~~v~iWd~ 45 (577)
T 2ymu_A 14 AHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 45 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 46789999999999999999999999999995
No 94
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=69.64 E-value=7.9 Score=29.27 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=30.3
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..++|..+..++..+.|++-+.+++|++|++..
T Consensus 309 ~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 309 HTDRIYSTIYDHERKRCISASMDTTIRIWDLEN 341 (464)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 567899999999999999999999999999964
No 95
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=69.09 E-value=37 Score=26.17 Aligned_cols=71 Identities=7% Similarity=0.146 Sum_probs=47.0
Q ss_pred EecCCCCEEEEEEecCCCccc-----cccceEEecCCcccccchhhhhhhccCCCceeEEEEeCCCceEEEecCCCeEEE
Q psy7671 6 MGGTDGNLYEIKYQRDASWFS-----ASCSKVCLTSSSLTYILPTFINALITQEDSLAQICIDNSRNVLYTRSELGLISV 80 (115)
Q Consensus 6 ~gG~DG~lyEl~Y~~~~~Wf~-----~kc~kinhT~~~~ssllPs~~~~~~~~~~~I~qi~vD~sR~lLYtLs~~s~I~v 80 (115)
+-|-++.|.-+.|+++..++- +.++.-+.+.. .+-.+ .+...+|..|++.+..+.|.+-+.+++|++
T Consensus 12 L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~~~----~~~~l----~gh~~~V~~l~fspdg~~las~~~d~~i~v 83 (577)
T 2ymu_A 12 LEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ----LLQTL----TGHSSSVWGVAFSPDGQTIASASDDKTVKL 83 (577)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSC----EEEEE----ECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCC----EEEEE----eCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 445566777788877655641 22222232211 11111 145789999999999999999999999999
Q ss_pred EEec
Q psy7671 81 YDLY 84 (115)
Q Consensus 81 y~Lg 84 (115)
|++.
T Consensus 84 Wd~~ 87 (577)
T 2ymu_A 84 WNRN 87 (577)
T ss_dssp EETT
T ss_pred EECC
Confidence 9973
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=68.93 E-value=16 Score=27.86 Aligned_cols=43 Identities=7% Similarity=-0.002 Sum_probs=32.1
Q ss_pred CCceeEEEEeCCCceEEEec-CCCeEEEEEe-cCCCCceeeEEEe
Q psy7671 54 EDSLAQICIDNSRNVLYTRS-ELGLISVYDL-YERGQGFRSLVSL 96 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs-~~s~I~vy~L-g~~g~~~~~v~s~ 96 (115)
...+..|...+..+.||+-+ .++.|.+|++ ...+..+..+.++
T Consensus 307 ~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~ 351 (450)
T 2vdu_B 307 EFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQII 351 (450)
T ss_dssp CCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEE
T ss_pred eEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEe
Confidence 34688899999999999999 8999999999 3333344444443
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=68.82 E-value=7.7 Score=29.09 Aligned_cols=33 Identities=24% Similarity=0.446 Sum_probs=30.3
Q ss_pred CCCceeEEEEeC-CCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDN-SRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~-sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..++|..+++.+ ..++|.|=+.+++|++|++..
T Consensus 62 h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~ 95 (437)
T 3gre_A 62 EPNSITSSAVSPGETPYLITGSDQGVIKIWNLKE 95 (437)
T ss_dssp TTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHH
T ss_pred CCCceEEEEECCCCCCEEEEecCCceEEEeECcc
Confidence 468999999999 899999999999999999965
No 98
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=68.66 E-value=16 Score=27.14 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=29.6
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
.....+..+++++..+++++-+.+++|.+|++..
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 3466899999999999999999999999999854
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=68.09 E-value=8.7 Score=28.67 Aligned_cols=34 Identities=15% Similarity=0.317 Sum_probs=30.8
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCe-EEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGL-ISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~-I~vy~Lg~ 85 (115)
...++|..+.+.+..++|.|=+.+++ |++|++..
T Consensus 193 ~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 193 AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 45788999999999999999999998 99999964
No 100
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=67.94 E-value=32 Score=25.03 Aligned_cols=33 Identities=12% Similarity=0.241 Sum_probs=29.3
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..++|..+...+..++|.+=+.+++|++|++..
T Consensus 152 h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 152 HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEEEET
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 456799999999999999999999999999854
No 101
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=67.61 E-value=17 Score=26.21 Aligned_cols=40 Identities=10% Similarity=0.035 Sum_probs=30.3
Q ss_pred CceeEEEEeCCCceEEEecCC-CeEEEEEecCCCCceeeEE
Q psy7671 55 DSLAQICIDNSRNVLYTRSEL-GLISVYDLYERGQGFRSLV 94 (115)
Q Consensus 55 ~~I~qi~vD~sR~lLYtLs~~-s~I~vy~Lg~~g~~~~~v~ 94 (115)
..+..+++++..+.||+-+.. +.|.+|++......+..+.
T Consensus 286 ~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 286 DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 356789999999988888764 8999999976544555443
No 102
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=67.56 E-value=21 Score=28.97 Aligned_cols=72 Identities=11% Similarity=0.136 Sum_probs=46.3
Q ss_pred cCCCCEEEEEEecCCCcc-----ccccceEEecCCcccccchhhhhhhccCCCceeEEEEeCCCceEEEecCCCeEEEEE
Q psy7671 8 GTDGNLYEIKYQRDASWF-----SASCSKVCLTSSSLTYILPTFINALITQEDSLAQICIDNSRNVLYTRSELGLISVYD 82 (115)
Q Consensus 8 G~DG~lyEl~Y~~~~~Wf-----~~kc~kinhT~~~~ssllPs~~~~~~~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~ 82 (115)
|..+.|.-+.++.+..|+ .+....-+...+.. .........+|..+...+..+.|.+-+.+++|.+|+
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVE-------VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-------EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCce-------EEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 444567777777666554 12222223222211 111113567899999999999999999999999999
Q ss_pred ecCC
Q psy7671 83 LYER 86 (115)
Q Consensus 83 Lg~~ 86 (115)
+...
T Consensus 84 ~~~~ 87 (814)
T 3mkq_A 84 YNTG 87 (814)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 8643
No 103
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=67.21 E-value=13 Score=27.69 Aligned_cols=34 Identities=9% Similarity=0.213 Sum_probs=30.8
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
...+|..++..+..+.|.+=+.+++|++|++..+
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 4678999999999999999999999999999654
No 104
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=67.17 E-value=16 Score=26.79 Aligned_cols=33 Identities=12% Similarity=0.282 Sum_probs=29.8
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...+|..+.+.+..+.|.+=+.+++|++|++..
T Consensus 212 h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 212 HESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred ccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 467899999999999999999999999999943
No 105
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=67.10 E-value=8 Score=28.34 Aligned_cols=33 Identities=9% Similarity=0.099 Sum_probs=28.7
Q ss_pred CCceeEEEEeC--CCceEEEecCCCeEEEEEecCC
Q psy7671 54 EDSLAQICIDN--SRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 54 ~~~I~qi~vD~--sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
.++|..+..++ ..+.|.+-+.+++|++|++...
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~ 159 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDD 159 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTCCEEEEESSSS
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCC
Confidence 47899999999 9999999999999999999643
No 106
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=66.97 E-value=9.2 Score=28.69 Aligned_cols=34 Identities=9% Similarity=0.219 Sum_probs=30.2
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
...+|..+.+.+..+.|++-+.+++|++|++...
T Consensus 348 h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 348 HDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp CSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 4678999999999999999999999999999654
No 107
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=66.93 E-value=38 Score=25.38 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=28.1
Q ss_pred CCCceeEEEEeCC-CceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNS-RNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~s-R~lLYtLs~~s~I~vy~Lg~~ 86 (115)
..+.|..+.+.+. +++|.+=+.+++|++||+...
T Consensus 168 h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~ 202 (344)
T 4gqb_B 168 HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP 202 (344)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS
T ss_pred cCCceEEEEecCCCCCceeeecccccccccccccc
Confidence 4678889998765 468999999999999999643
No 108
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=66.59 E-value=36 Score=24.99 Aligned_cols=35 Identities=9% Similarity=0.099 Sum_probs=31.2
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
+..+.|..++..+..+.|.+=+.+++|++|++..+
T Consensus 59 ~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~ 93 (345)
T 3fm0_A 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQD 93 (345)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC
T ss_pred ccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCC
Confidence 45778999999999999999999999999998644
No 109
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=65.67 E-value=10 Score=28.58 Aligned_cols=33 Identities=12% Similarity=0.211 Sum_probs=28.6
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..+.|..+++++..+.|.+-+.+++|++|++..
T Consensus 255 h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 255 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 456799999999999999999999999999964
No 110
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=65.67 E-value=11 Score=28.07 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=30.9
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
+..++|..+...+.++.|.|=+.+++|++|+...
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~ 95 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFT 95 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 5678999999999999999999999999999754
No 111
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=65.03 E-value=9.7 Score=29.06 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=28.8
Q ss_pred cCCCceeEEEEeC-CCceEEEecCCCeEEEEEec
Q psy7671 52 TQEDSLAQICIDN-SRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 52 ~~~~~I~qi~vD~-sR~lLYtLs~~s~I~vy~Lg 84 (115)
+..++|..|...+ ..+.|+|-+.+++|++|++.
T Consensus 162 gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 162 GAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp SSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 4577899999985 57899999999999999985
No 112
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=64.80 E-value=13 Score=25.97 Aligned_cols=33 Identities=9% Similarity=0.188 Sum_probs=29.6
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..+.|..++..+..+.|.+=+.+++|++|++..
T Consensus 66 ~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~ 98 (318)
T 4ggc_A 66 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ 98 (318)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCeEEEEEECCCCCEEEEEECCCcEEEeecCC
Confidence 456799999999999999999999999999864
No 113
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=64.18 E-value=26 Score=30.18 Aligned_cols=30 Identities=20% Similarity=0.362 Sum_probs=25.5
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEE
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVY 81 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy 81 (115)
....+|..|.+|.+++-||..+++...+|-
T Consensus 416 ~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 416 RRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp SSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred CCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 456789999999999999999998777663
No 114
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=63.70 E-value=12 Score=27.50 Aligned_cols=35 Identities=11% Similarity=0.118 Sum_probs=30.9
Q ss_pred cCCCceeEEEEeCCC-ceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSR-NVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR-~lLYtLs~~s~I~vy~Lg~~ 86 (115)
...++|..+...+.. ++|.+=+.+++|++|++...
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 106 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ 106 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc
Confidence 356889999999998 99999999999999999743
No 115
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=63.45 E-value=6.4 Score=30.96 Aligned_cols=33 Identities=9% Similarity=0.169 Sum_probs=28.5
Q ss_pred CCCceeEEEEeCCCceEE----EecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLY----TRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLY----tLs~~s~I~vy~Lg~ 85 (115)
...+|..+..++..+.|+ +=+.+++|++|++..
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~ 127 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRT 127 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHH
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccc
Confidence 356799999999999999 778899999999854
No 116
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=62.49 E-value=12 Score=31.79 Aligned_cols=28 Identities=21% Similarity=0.398 Sum_probs=23.9
Q ss_pred CCCcee-EEEEeCCCceEEEecCCCeEEE
Q psy7671 53 QEDSLA-QICIDNSRNVLYTRSELGLISV 80 (115)
Q Consensus 53 ~~~~I~-qi~vD~sR~lLYtLs~~s~I~v 80 (115)
..++|. .|.+|..++-||..+++..++|
T Consensus 433 ~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 433 QGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp TTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred CCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 356774 8999999999999999988776
No 117
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=61.23 E-value=44 Score=24.24 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=29.3
Q ss_pred CCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 54 EDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
..+|..+.+.+..++|.+=+.+++|++|++...
T Consensus 170 ~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp SCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 446899999999999999999999999999654
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=61.17 E-value=23 Score=26.77 Aligned_cols=31 Identities=13% Similarity=0.170 Sum_probs=19.2
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...+|..+..| .+.|++-+.+++|++|++..
T Consensus 255 ~~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~ 285 (435)
T 1p22_A 255 HRAAVNVVDFD--DKYIVSASGDRTIKVWNTST 285 (435)
T ss_dssp CSSCEEEEEEE--TTEEEEEETTSEEEEEETTT
T ss_pred CCCcEEEEEeC--CCEEEEEeCCCeEEEEECCc
Confidence 34456666663 35677777777777777643
No 119
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=60.15 E-value=18 Score=30.47 Aligned_cols=27 Identities=19% Similarity=0.245 Sum_probs=23.1
Q ss_pred CCcee-EEEEeCCCceEEEecCCCeEEE
Q psy7671 54 EDSLA-QICIDNSRNVLYTRSELGLISV 80 (115)
Q Consensus 54 ~~~I~-qi~vD~sR~lLYtLs~~s~I~v 80 (115)
..+|. .|.+|..++-||..+++..++|
T Consensus 449 ~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 449 GSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred CCccccceEEccCCCeEEEEecccccee
Confidence 56785 8999999999999999876665
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=59.23 E-value=49 Score=27.62 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=30.6
Q ss_pred CCCceeEEEEeCC---CceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNS---RNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~s---R~lLYtLs~~s~I~vy~Lg~~ 86 (115)
...+|..++..+. .+.|++-+.+++|++|++...
T Consensus 203 h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 203 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 4678999999999 899999999999999999754
No 121
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=58.13 E-value=55 Score=24.32 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=27.7
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecCCC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYERG 87 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g 87 (115)
.....|..+..|+ +.|++-+.+++|.+|++...+
T Consensus 174 ~~~~~v~~~~~~~--~~l~~~~~dg~i~i~d~~~~~ 207 (401)
T 4aez_A 174 GHQARVGCLSWNR--HVLSSGSRSGAIHHHDVRIAN 207 (401)
T ss_dssp CCSSCEEEEEEET--TEEEEEETTSEEEEEETTSSS
T ss_pred CCCCceEEEEECC--CEEEEEcCCCCEEEEecccCc
Confidence 3467888888864 699999999999999997543
No 122
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=58.06 E-value=15 Score=27.63 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=29.6
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...+|..+++.+..++|.+=+.+++|++|++..
T Consensus 268 ~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 268 RFKGITSMDVDMKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp SCSCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred CCCCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence 456799999999999999999999999999853
No 123
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=57.90 E-value=46 Score=25.04 Aligned_cols=22 Identities=23% Similarity=0.285 Sum_probs=12.5
Q ss_pred CCceEEEecCCCeEEEEEecCC
Q psy7671 65 SRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 65 sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
..+.|.+-+.+++|.+|++...
T Consensus 222 ~~~~l~s~s~dg~i~vwd~~~~ 243 (435)
T 1p22_A 222 NNGMMVTCSKDRSIAVWDMASP 243 (435)
T ss_dssp CTTEEEEEETTSCEEEEECSSS
T ss_pred cCCEEEEeeCCCcEEEEeCCCC
Confidence 5555555555666666665443
No 124
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=57.70 E-value=18 Score=27.52 Aligned_cols=33 Identities=12% Similarity=0.324 Sum_probs=29.6
Q ss_pred CCCceeEEEEeCCCc-eEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRN-VLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~-lLYtLs~~s~I~vy~Lg~ 85 (115)
..+.|..+.+.+... +|.+-+.++.|++|++..
T Consensus 377 h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 377 HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 456799999999988 999999999999999963
No 125
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=56.32 E-value=17 Score=27.00 Aligned_cols=67 Identities=16% Similarity=0.383 Sum_probs=44.0
Q ss_pred ceEEEec-C-CCCEEEEEEecCCCccccccceEEecCCcccccchhhhhhhccCCCceeEEEEeCCCceEEEecCCCeEE
Q psy7671 2 IVVFMGG-T-DGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICIDNSRNVLYTRSELGLIS 79 (115)
Q Consensus 2 GRIF~gG-~-DG~lyEl~Y~~~~~Wf~~kc~kinhT~~~~ssllPs~~~~~~~~~~~I~qi~vD~sR~lLYtLs~~s~I~ 79 (115)
.++|.|+ . ++.||-+.+..+.| +...++.. | ....+.+..+++++..+.||+-+.. +|.
T Consensus 3 ~~~~vg~~~~~~~i~~~~~d~~~g----~l~~~~~~--------~------~~~~~~~~~~a~spdg~~l~~~~~~-~v~ 63 (365)
T 1jof_A 3 HHLMIGTWTPPGAIFTVQFDDEKL----TCKLIKRT--------E------IPQDEPISWMTFDHERKNIYGAAMK-KWS 63 (365)
T ss_dssp EEEEEEESSSSCEEEEEEEETTTT----EEEEEEEE--------E------CCTTCCCSEEEECTTSSEEEEEEBT-EEE
T ss_pred EEEEEEEccCCCcEEEEEEECCCC----CEEEeeEE--------c------cCCCCCCcEEEECCCCCEEEEEccc-eEE
Confidence 3677776 3 35688888765544 22223211 0 0122356678899999999999987 999
Q ss_pred EEEecCCC
Q psy7671 80 VYDLYERG 87 (115)
Q Consensus 80 vy~Lg~~g 87 (115)
+|++..+|
T Consensus 64 ~~~~~~~g 71 (365)
T 1jof_A 64 SFAVKSPT 71 (365)
T ss_dssp EEEEEETT
T ss_pred EEEECCCC
Confidence 99997555
No 126
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=54.59 E-value=37 Score=27.59 Aligned_cols=33 Identities=6% Similarity=0.136 Sum_probs=29.6
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEec
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg 84 (115)
+..+.|..+...+..+.|.|=+.+++|++|++.
T Consensus 470 ~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 470 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECC
Confidence 356789999999999999999999999999973
No 127
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=54.21 E-value=28 Score=26.28 Aligned_cols=37 Identities=27% Similarity=0.451 Sum_probs=28.6
Q ss_pred eeEEEEeCCCceEEEecCCCeEEEEEecCCCCceeeEEEe
Q psy7671 57 LAQICIDNSRNVLYTRSELGLISVYDLYERGQGFRSLVSL 96 (115)
Q Consensus 57 I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g~~~~~v~s~ 96 (115)
...|++++..+.||+-+. ++|.|||+... .++.+.++
T Consensus 307 p~~ia~spdg~~l~v~n~-~~v~v~D~~t~--~l~~~~~i 343 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDG-GNVNVYDISQP--EPKLLRTI 343 (361)
T ss_dssp CCEEEEETTTTEEEEECS-SCEEEEECSSS--SCEEEEEE
T ss_pred eeEEEECCCCCEEEEeCC-CeEEEEECCCC--cceeeEEe
Confidence 778999999999999997 99999988542 23444443
No 128
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=53.83 E-value=12 Score=28.61 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=29.7
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...+|..++.++..+.|.|-+.+++|++|++..
T Consensus 295 h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 295 HRHPVNAACFSPDGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp CSSCEEECCBCTTSSEEEEEESSSCEEEEESSS
T ss_pred ccccccceeECCCCCeeEEEcCCCEEEEEECCC
Confidence 456899999999999999999999999999964
No 129
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=52.93 E-value=35 Score=29.54 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=30.2
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...+|..+++.+..+.|.|-+.+++|++|++..
T Consensus 1126 h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~ 1158 (1249)
T 3sfz_A 1126 HNGCVRCSAFSLDGILLATGDDNGEIRIWNVSD 1158 (1249)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCCCEEESSS
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 467899999999999999999999999999964
No 130
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=52.83 E-value=52 Score=24.30 Aligned_cols=31 Identities=23% Similarity=0.222 Sum_probs=26.5
Q ss_pred CceeEEEEeCCCceEEEecC-CCeEEEEEecC
Q psy7671 55 DSLAQICIDNSRNVLYTRSE-LGLISVYDLYE 85 (115)
Q Consensus 55 ~~I~qi~vD~sR~lLYtLs~-~s~I~vy~Lg~ 85 (115)
.....+++++..+.||+.++ +++|.+|++..
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 224 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDP 224 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEEEeC
Confidence 45788999999999999886 67999999975
No 131
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=52.31 E-value=96 Score=26.01 Aligned_cols=75 Identities=20% Similarity=0.228 Sum_probs=46.0
Q ss_pred CCEEEEEEecCCC---cc---ccccceEEecCCcccccchhhhhhhccCCCceeEEEEeCC-CceEEEecCCCeEEEEEe
Q psy7671 11 GNLYEIKYQRDAS---WF---SASCSKVCLTSSSLTYILPTFINALITQEDSLAQICIDNS-RNVLYTRSELGLISVYDL 83 (115)
Q Consensus 11 G~lyEl~Y~~~~~---Wf---~~kc~kinhT~~~~ssllPs~~~~~~~~~~~I~qi~vD~s-R~lLYtLs~~s~I~vy~L 83 (115)
.+++.|.|...++ |- .++..+.+...+....++.+-... -..-.....|+||.- |+|.+|=+.++.|+|.++
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~-~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~ 418 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPS-QNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRL 418 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC---------CCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEccccc-ccccCCcceEEeeccCCeEEEEcCCCCEEEEEEC
Confidence 4788999987776 32 356666654433332333210000 012346789999985 777778889999999998
Q ss_pred cCCCC
Q psy7671 84 YERGQ 88 (115)
Q Consensus 84 g~~g~ 88 (115)
+|.
T Consensus 419 --~G~ 421 (628)
T 4a0p_A 419 --DGR 421 (628)
T ss_dssp --TSC
T ss_pred --CCC
Confidence 454
No 132
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=52.16 E-value=23 Score=24.81 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=27.5
Q ss_pred CCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 54 EDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
...+..+++++..+.||+-+.++.|.+|++..
T Consensus 279 ~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 279 PHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp SSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred CCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 34677899999999999989999999999854
No 133
>2bt9_A Lectin; sugar recognition, beta-propeller; HET: MFU; 0.94A {Ralstonia solanacearum} PDB: 2bs5_A* 2bs6_A* 3zw0_A* 3zw1_B* 3zw2_A* 3zwe_A* 3zzv_A* 3zw0_B* 3zw1_A*
Probab=52.01 E-value=7.5 Score=25.90 Aligned_cols=26 Identities=19% Similarity=0.597 Sum_probs=21.5
Q ss_pred ceEEEecCCCCEEEEEEecCCCcccccc
Q psy7671 2 IVVFMGGTDGNLYEIKYQRDASWFSASC 29 (115)
Q Consensus 2 GRIF~gG~DG~lyEl~Y~~~~~Wf~~kc 29 (115)
-|||+ ..|+.|.|..|. ..+|..+--
T Consensus 16 IRVYy-~~~~~i~E~~~d-g~~W~~g~~ 41 (90)
T 2bt9_A 16 IRVYT-ANNGKITERCWD-GKGWYTGAF 41 (90)
T ss_dssp EEEEE-EETTEEEEEEES-SSCEEEEEE
T ss_pred EEEEE-cCCCcEEEEEEc-CCccccCcc
Confidence 39999 888999999999 567976653
No 134
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=51.96 E-value=22 Score=28.67 Aligned_cols=34 Identities=12% Similarity=0.328 Sum_probs=30.5
Q ss_pred cCCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
+..++|..+++.+..+.|++-+.+++|++|++..
T Consensus 322 gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 322 GHNKAITALSSSADGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCC
Confidence 3567899999999999999999999999999863
No 135
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=51.79 E-value=25 Score=25.98 Aligned_cols=31 Identities=13% Similarity=0.030 Sum_probs=26.6
Q ss_pred CCceeEEEEeCCCceEEEecC-CCeEEEEEec
Q psy7671 54 EDSLAQICIDNSRNVLYTRSE-LGLISVYDLY 84 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~-~s~I~vy~Lg 84 (115)
...+..+++++..+.||+-+. +++|.+|++.
T Consensus 400 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 400 GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 457889999999999998875 9999999984
No 136
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=49.99 E-value=22 Score=27.79 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=29.5
Q ss_pred CCceeEEEEeCC-CceEEEecCCCeEEEEEecCC
Q psy7671 54 EDSLAQICIDNS-RNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 54 ~~~I~qi~vD~s-R~lLYtLs~~s~I~vy~Lg~~ 86 (115)
.++|..++..+. .++|.+-+.+++|++|++...
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~ 182 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET 182 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS
T ss_pred CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC
Confidence 578999999987 899999999999999999654
No 137
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=49.16 E-value=22 Score=26.86 Aligned_cols=34 Identities=12% Similarity=0.244 Sum_probs=28.2
Q ss_pred CCCceeEEEEeC--------CCceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDN--------SRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~--------sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
..+.|..+...+ ..++|-+=+.+++|++||+...
T Consensus 135 H~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 135 HHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred CCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 467788888865 4679999999999999999654
No 138
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=48.30 E-value=48 Score=29.40 Aligned_cols=75 Identities=16% Similarity=0.193 Sum_probs=44.4
Q ss_pred EEEecCCCCEEEEEEecCCCccccccceEEecCC-cccccchhhhhhh-ccCCCceeEE-EEeCCCceEEEecCCCeEEE
Q psy7671 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSS-SLTYILPTFINAL-ITQEDSLAQI-CIDNSRNVLYTRSELGLISV 80 (115)
Q Consensus 4 IF~gG~DG~lyEl~Y~~~~~Wf~~kc~kinhT~~-~~ssllPs~~~~~-~~~~~~I~qi-~vD~sR~lLYtLs~~s~I~v 80 (115)
++.+-+||-|..|+-+.++.| .-+....+ .+++ +-++++.. -...+.++.. ..| ...|.||+.+-++++
T Consensus 174 liVsL~DGGLLrL~r~~~~d~-----~~~~Fnd~s~l~S-L~~lf~~~~~~~~~~~Is~~~~~--~~fLftL~~Dh~LRi 245 (729)
T 3f7f_A 174 SVVFLEDGGLLGLKKVDGVHY-----EPLLFNDNSYLKC-LTRFFSRSSKSDYDSVISCKLFH--ERYLIVLTQNCHLKI 245 (729)
T ss_dssp EEEEETTSCEECCEESSSSCE-----ECCCCCCCGGGGG-GSTTCCTTCSSCCCCEEEEEEET--TTEEEEEETTCEEEE
T ss_pred EEEEEcCCCEEEEEeccCCCc-----ceeeecCCchhhh-hHHhhcCCCCCCcCceEEEeccC--CcEEEEEEcCCeEEE
Confidence 455568999999998876666 11111111 1222 12233210 0123444444 666 569999999999999
Q ss_pred EEecCC
Q psy7671 81 YDLYER 86 (115)
Q Consensus 81 y~Lg~~ 86 (115)
|++...
T Consensus 246 WsL~t~ 251 (729)
T 3f7f_A 246 WDLTSF 251 (729)
T ss_dssp EETTTT
T ss_pred EEcCCC
Confidence 999654
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=48.13 E-value=40 Score=22.73 Aligned_cols=39 Identities=13% Similarity=0.161 Sum_probs=28.2
Q ss_pred CCCceeEEEEeCCCceEEEe-cCCCeEEEEEecCCCCcee
Q psy7671 53 QEDSLAQICIDNSRNVLYTR-SELGLISVYDLYERGQGFR 91 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtL-s~~s~I~vy~Lg~~g~~~~ 91 (115)
....+..+.+++..+.|+.- ..++.+++|++..++....
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~ 210 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVE 210 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEE
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcE
Confidence 34678899998887755544 4688999999986554443
No 140
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=46.32 E-value=32 Score=27.99 Aligned_cols=34 Identities=9% Similarity=0.208 Sum_probs=26.4
Q ss_pred cCCCceeEEE--EeCCC-ceEEEecCCCeEEEEEecC
Q psy7671 52 TQEDSLAQIC--IDNSR-NVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 52 ~~~~~I~qi~--vD~sR-~lLYtLs~~s~I~vy~Lg~ 85 (115)
...++|..++ ..+.. ++|.|=+.+++|++||+..
T Consensus 306 ~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 306 VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 3467888884 34443 8999999999999999853
No 141
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=45.70 E-value=34 Score=25.73 Aligned_cols=33 Identities=9% Similarity=0.188 Sum_probs=29.2
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..+.|..++..+..+.|.+=+.+++|++|++..
T Consensus 146 ~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 146 PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEEcCC
Confidence 345799999999999999999999999999964
No 142
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=45.46 E-value=11 Score=31.19 Aligned_cols=25 Identities=16% Similarity=0.072 Sum_probs=17.3
Q ss_pred CceeEEEEeCCCceEEEecCCCeEEE
Q psy7671 55 DSLAQICIDNSRNVLYTRSELGLISV 80 (115)
Q Consensus 55 ~~I~qi~vD~sR~lLYtLs~~s~I~v 80 (115)
.+| ++.++.+++-||..+++..++|
T Consensus 455 ~pi-~~~l~~~~~~Lyv~s~~~V~~v 479 (527)
T 4fww_A 455 QPV-QRDVSRLGDHLLFASGDQVFQV 479 (527)
T ss_dssp CCB-CSCCEEETTEEEEEETTEEEEE
T ss_pred cee-ehhcccCCCEEEEEECCEEEEE
Confidence 344 3445666778999999876665
No 143
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=44.07 E-value=1.1e+02 Score=23.67 Aligned_cols=71 Identities=20% Similarity=0.237 Sum_probs=39.2
Q ss_pred CCEEEEEEecCCC---cc---ccccceEEecCCcccccchhhhhhhccCCCceeEEEEeC-CCceEEEecCCCeEEEEEe
Q psy7671 11 GNLYEIKYQRDAS---WF---SASCSKVCLTSSSLTYILPTFINALITQEDSLAQICIDN-SRNVLYTRSELGLISVYDL 83 (115)
Q Consensus 11 G~lyEl~Y~~~~~---Wf---~~kc~kinhT~~~~ssllPs~~~~~~~~~~~I~qi~vD~-sR~lLYtLs~~s~I~vy~L 83 (115)
++.+-|.|...++ |- .++..+++............++. ..-.....|+||. .++|..+=+.++.|.++++
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~---~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC---SSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe---CCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence 4667777776555 21 35666665443110000011111 2334677899998 5666666677889998887
Q ss_pred c
Q psy7671 84 Y 84 (115)
Q Consensus 84 g 84 (115)
.
T Consensus 189 ~ 189 (400)
T 3p5b_L 189 K 189 (400)
T ss_dssp T
T ss_pred C
Confidence 3
No 144
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=43.01 E-value=39 Score=23.60 Aligned_cols=29 Identities=10% Similarity=0.167 Sum_probs=23.0
Q ss_pred ceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 56 SLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 56 ~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
....+++|+..+++.+ +.+++|++|++..
T Consensus 252 ~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 252 QCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp CEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred cceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 3668999998875555 7889999999854
No 145
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=42.49 E-value=68 Score=22.32 Aligned_cols=37 Identities=14% Similarity=0.263 Sum_probs=27.2
Q ss_pred CceeEEEEeCCCceEEEecCCC-eEEEEEecCCCCceeeE
Q psy7671 55 DSLAQICIDNSRNVLYTRSELG-LISVYDLYERGQGFRSL 93 (115)
Q Consensus 55 ~~I~qi~vD~sR~lLYtLs~~s-~I~vy~Lg~~g~~~~~v 93 (115)
.....|++|+..+++.+=..++ .|.+|+. +|+.+..+
T Consensus 207 ~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~--~g~~~~~~ 244 (286)
T 1q7f_A 207 NYPIGVGINSNGEILIADNHNNFNLTIFTQ--DGQLISAL 244 (286)
T ss_dssp CSEEEEEECTTCCEEEEECSSSCEEEEECT--TSCEEEEE
T ss_pred CCCcEEEECCCCCEEEEeCCCCEEEEEECC--CCCEEEEE
Confidence 4678899999888777776665 9999984 55444444
No 146
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=42.22 E-value=1.4e+02 Score=24.92 Aligned_cols=66 Identities=18% Similarity=0.281 Sum_probs=43.4
Q ss_pred CEEEEEEecCCCcc------ccccceEEecCCcccccchhhhhhhccCCCceeEEEEeC-CCceEEEecCCCeEEEEEec
Q psy7671 12 NLYEIKYQRDASWF------SASCSKVCLTSSSLTYILPTFINALITQEDSLAQICIDN-SRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 12 ~lyEl~Y~~~~~Wf------~~kc~kinhT~~~~ssllPs~~~~~~~~~~~I~qi~vD~-sR~lLYtLs~~s~I~vy~Lg 84 (115)
+.+.+.|...++.+ .++..+++...+....++. ..-....-|+||. .|+|.+|=+.++.|++.++.
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~-------~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~ 422 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVT-------AQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLN 422 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEE-------CCCCCcCceEEecccCcEEEEeCCCCcEEEEeCC
Confidence 67788887766521 4566666655443333322 1123456899995 78888888889999999984
No 147
>1ofz_A Fucose-specific lectin; sugar-binding protein, AAL, aleuria aurantia lectin; HET: FUL FUC; 1.5A {Aleuria aurantia} SCOP: b.68.8.1 PDB: 1iuc_A* 1iub_A*
Probab=41.33 E-value=20 Score=28.12 Aligned_cols=23 Identities=26% Similarity=0.518 Sum_probs=20.4
Q ss_pred eEEEecCCCCEEEEEEecCCCccc
Q psy7671 3 VVFMGGTDGNLYEIKYQRDASWFS 26 (115)
Q Consensus 3 RIF~gG~DG~lyEl~Y~~~~~Wf~ 26 (115)
|||.-++|+.|+|..|.. ++|-.
T Consensus 77 ~Vfy~~~dn~l~e~~~~~-~~W~~ 99 (312)
T 1ofz_A 77 RVYCVNKDNILSEFVYDG-SKWIT 99 (312)
T ss_dssp EEEEECTTCBEEEEEEES-SCEEE
T ss_pred EEEEECCCCcEEEEEecC-CCccc
Confidence 789999999999999997 78954
No 148
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=41.29 E-value=30 Score=30.16 Aligned_cols=29 Identities=17% Similarity=0.210 Sum_probs=23.8
Q ss_pred CCCce-eEEEEeCCCceEEEecCCCeEEEE
Q psy7671 53 QEDSL-AQICIDNSRNVLYTRSELGLISVY 81 (115)
Q Consensus 53 ~~~~I-~qi~vD~sR~lLYtLs~~s~I~vy 81 (115)
..++| ..|.+|.+++-||..+++...+|-
T Consensus 447 ~~~pI~~~l~l~~~~~~Lyv~s~~~V~qvP 476 (681)
T 3oky_A 447 DGSPILRDMAFSINQLYLYVMSERQVTRVP 476 (681)
T ss_dssp TCCCCCSCCEECTTSSEEEEECSSEEEEEE
T ss_pred CCCceeeeeEEcCCCCEEEEEecCEEEEEE
Confidence 35677 689999999999999998776663
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=40.58 E-value=39 Score=23.82 Aligned_cols=31 Identities=13% Similarity=0.266 Sum_probs=26.1
Q ss_pred CceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 55 DSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 55 ~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..+..+++++..+.||+-+.++.|.+|++..
T Consensus 295 ~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 295 HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp SCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred CCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 4567899999988899878889999999853
No 150
>2bt9_A Lectin; sugar recognition, beta-propeller; HET: MFU; 0.94A {Ralstonia solanacearum} PDB: 2bs5_A* 2bs6_A* 3zw0_A* 3zw1_B* 3zw2_A* 3zwe_A* 3zzv_A* 3zw0_B* 3zw1_A*
Probab=39.21 E-value=18 Score=23.97 Aligned_cols=23 Identities=17% Similarity=0.318 Sum_probs=19.0
Q ss_pred eEEEecCCCCEEEEEEecCCCcccc
Q psy7671 3 VVFMGGTDGNLYEIKYQRDASWFSA 27 (115)
Q Consensus 3 RIF~gG~DG~lyEl~Y~~~~~Wf~~ 27 (115)
|||+ ..|+.|.|..|. ..+|..+
T Consensus 62 RVY~-~~~n~i~E~~w~-~~~W~~G 84 (90)
T 2bt9_A 62 RVYA-STGTTTTEWCWD-GNGWTKG 84 (90)
T ss_dssp EEEE-EETTEEEEEEES-SSCEEEC
T ss_pred EEEE-CCCCcEEEEEEc-CCceecC
Confidence 8999 667899999999 7788544
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=37.40 E-value=90 Score=20.86 Aligned_cols=37 Identities=5% Similarity=-0.116 Sum_probs=26.0
Q ss_pred CCceeEEEEeCCCc-eEEEecCCCeEEEEEecCCCCce
Q psy7671 54 EDSLAQICIDNSRN-VLYTRSELGLISVYDLYERGQGF 90 (115)
Q Consensus 54 ~~~I~qi~vD~sR~-lLYtLs~~s~I~vy~Lg~~g~~~ 90 (115)
.+.+..+...+..+ ++|+-+.++.+++|++..++...
T Consensus 128 ~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 128 NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE 165 (297)
T ss_dssp SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE
T ss_pred CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc
Confidence 34466777876555 55688889999999987654333
No 152
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=37.37 E-value=53 Score=24.66 Aligned_cols=29 Identities=10% Similarity=0.123 Sum_probs=16.4
Q ss_pred CCceeEEEEeCCCceEEEecCCCeEEEEEec
Q psy7671 54 EDSLAQICIDNSRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg 84 (115)
.++|..+..+ .++|++=+.+++|++|++.
T Consensus 159 ~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 159 TGGVWSSQMR--DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp SSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence 3455555554 3466666666666666653
No 153
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=37.27 E-value=30 Score=25.64 Aligned_cols=27 Identities=22% Similarity=0.206 Sum_probs=24.4
Q ss_pred eeEEEEeCCCceEEEecCCCeEEEEEe
Q psy7671 57 LAQICIDNSRNVLYTRSELGLISVYDL 83 (115)
Q Consensus 57 I~qi~vD~sR~lLYtLs~~s~I~vy~L 83 (115)
..-|++|+..++.++...++.|.+|+.
T Consensus 250 pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 250 CDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp CSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred CceEEECCCCCEEEEccCCCeEEEEEC
Confidence 345999999999999999999999997
No 154
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=35.91 E-value=90 Score=22.69 Aligned_cols=28 Identities=11% Similarity=0.116 Sum_probs=22.5
Q ss_pred eeEEEEeCC-CceEEEecCCCeEEEEEec
Q psy7671 57 LAQICIDNS-RNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 57 I~qi~vD~s-R~lLYtLs~~s~I~vy~Lg 84 (115)
...|++|+. .+++.+=+.++.|++|++.
T Consensus 198 p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 678999998 5555566678899999985
No 155
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=35.78 E-value=97 Score=24.60 Aligned_cols=33 Identities=6% Similarity=-0.065 Sum_probs=23.9
Q ss_pred eeEEEEeCCCceEEEecCCCeEEEEEecCCCCce
Q psy7671 57 LAQICIDNSRNVLYTRSELGLISVYDLYERGQGF 90 (115)
Q Consensus 57 I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g~~~ 90 (115)
+..+++.+...++|+-++ +++++|.+..++...
T Consensus 296 ~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHGK-GAAVLGILDPESGEL 328 (662)
T ss_dssp CCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEE
T ss_pred CceEeEeCCCEEEEEEEc-CccEEEEEECCCCcE
Confidence 345666666779999888 999999876654433
No 156
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=35.32 E-value=60 Score=26.26 Aligned_cols=28 Identities=18% Similarity=0.158 Sum_probs=25.8
Q ss_pred eeEEEEeCCCceEEEecCCCeEEEEEec
Q psy7671 57 LAQICIDNSRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 57 I~qi~vD~sR~lLYtLs~~s~I~vy~Lg 84 (115)
+..+++++..+.||+-+.+++|.+||+.
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~ 208 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLW 208 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECc
Confidence 6678899999999999999999999993
No 157
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=34.35 E-value=54 Score=24.60 Aligned_cols=35 Identities=17% Similarity=0.145 Sum_probs=28.9
Q ss_pred cCCCceeEEEEeCCC-ceEEEecCCCeEEEEEecCC
Q psy7671 52 TQEDSLAQICIDNSR-NVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 52 ~~~~~I~qi~vD~sR-~lLYtLs~~s~I~vy~Lg~~ 86 (115)
....++..++..+.. ++|.+-+.+++|++||+...
T Consensus 184 ~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 184 PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 356788889998765 68999999999999999643
No 158
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=33.55 E-value=70 Score=23.14 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=27.3
Q ss_pred CCceeEEEEeCCCceEEEec---CCCeEEEEEecC
Q psy7671 54 EDSLAQICIDNSRNVLYTRS---ELGLISVYDLYE 85 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs---~~s~I~vy~Lg~ 85 (115)
...+..+++++..+.||+-+ .++.|.+|++..
T Consensus 199 ~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 199 EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred CCCccceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 45778899999999999988 689999999853
No 159
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=33.08 E-value=90 Score=21.95 Aligned_cols=30 Identities=17% Similarity=0.234 Sum_probs=24.5
Q ss_pred ceeEEEEeCCCceEEEecCC-CeEEEEEecC
Q psy7671 56 SLAQICIDNSRNVLYTRSEL-GLISVYDLYE 85 (115)
Q Consensus 56 ~I~qi~vD~sR~lLYtLs~~-s~I~vy~Lg~ 85 (115)
.+..+++++..+.||.-+.. +.|.+|++..
T Consensus 232 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp CEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred ccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 46678999999988887765 8999999853
No 160
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=32.92 E-value=82 Score=22.75 Aligned_cols=32 Identities=22% Similarity=0.184 Sum_probs=25.6
Q ss_pred CCceeEEEEeCCCceEE-EecCCCeEEEEEecC
Q psy7671 54 EDSLAQICIDNSRNVLY-TRSELGLISVYDLYE 85 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLY-tLs~~s~I~vy~Lg~ 85 (115)
...+..+++++..+.|| +.+.++.|++|++..
T Consensus 243 ~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 243 GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CCCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 44567899998887774 668899999999864
No 161
>1oqk_A Conserved protein MTH11; OB fold, archaeal RNAse P protein subunit, hydrolase; NMR {Methanothermobacterthermautotrophicus} SCOP: b.137.1.1
Probab=32.42 E-value=26 Score=23.22 Aligned_cols=21 Identities=24% Similarity=0.406 Sum_probs=19.2
Q ss_pred ceeEEEEeCCCceEEEecCCC
Q psy7671 56 SLAQICIDNSRNVLYTRSELG 76 (115)
Q Consensus 56 ~I~qi~vD~sR~lLYtLs~~s 76 (115)
.|.-++||+++|.|.-.++++
T Consensus 33 Gi~GiVV~ET~ntf~I~t~~~ 53 (97)
T 1oqk_A 33 GISGRVVDETRNTLRIEMDDG 53 (97)
T ss_dssp TCEEECCEEETTEEEEEETTT
T ss_pred CcEEEEEEcccceEEEEcCCC
Confidence 589999999999999999876
No 162
>1ofz_A Fucose-specific lectin; sugar-binding protein, AAL, aleuria aurantia lectin; HET: FUL FUC; 1.5A {Aleuria aurantia} SCOP: b.68.8.1 PDB: 1iuc_A* 1iub_A*
Probab=32.05 E-value=35 Score=26.73 Aligned_cols=25 Identities=20% Similarity=0.464 Sum_probs=21.5
Q ss_pred eEEEecCCCCEEEEEEecCCCcccc
Q psy7671 3 VVFMGGTDGNLYEIKYQRDASWFSA 27 (115)
Q Consensus 3 RIF~gG~DG~lyEl~Y~~~~~Wf~~ 27 (115)
|+|+=+.||.|.|..|..+.+|-..
T Consensus 24 ~Vy~q~~~n~i~e~~~~~~~~W~~~ 48 (312)
T 1ofz_A 24 RVYFQDLNGKIREAQRGGDNPWTGG 48 (312)
T ss_dssp EEEEEBTTSEEEEEEEETTSCCEEC
T ss_pred EEEEECCCCCEEEEEECCCCCcccC
Confidence 6899999999999999987789543
No 163
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=32.04 E-value=67 Score=22.60 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=26.0
Q ss_pred CCceeEEEEeCCCceEEEecC-CCe-EEEEEecCCCC
Q psy7671 54 EDSLAQICIDNSRNVLYTRSE-LGL-ISVYDLYERGQ 88 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~-~s~-I~vy~Lg~~g~ 88 (115)
......+++++..+.||+-.. ++. |.+|++..+|.
T Consensus 127 ~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~ 163 (331)
T 3u4y_A 127 PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGV 163 (331)
T ss_dssp CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCC
T ss_pred CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCc
Confidence 345578999998877776644 467 99999986654
No 164
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=30.21 E-value=53 Score=23.21 Aligned_cols=31 Identities=19% Similarity=0.274 Sum_probs=26.5
Q ss_pred CceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 55 DSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 55 ~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
..+..+++++..+.||+-+.++.|.+|++..
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~ 215 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNADGELITIDTAD 215 (353)
T ss_dssp TTCCCCEEETTTTEEEEECTTSEEEEEETTT
T ss_pred CccceEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 3467789999999999999999999999853
No 165
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=29.97 E-value=2.4e+02 Score=23.51 Aligned_cols=66 Identities=15% Similarity=0.250 Sum_probs=41.6
Q ss_pred CEEEEEEecCCC---cc---ccccceEEecCCcccccchhhhhhhccCCCceeEEEEeCC-CceEEEecCCCeEEEEEec
Q psy7671 12 NLYEIKYQRDAS---WF---SASCSKVCLTSSSLTYILPTFINALITQEDSLAQICIDNS-RNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 12 ~lyEl~Y~~~~~---Wf---~~kc~kinhT~~~~ssllPs~~~~~~~~~~~I~qi~vD~s-R~lLYtLs~~s~I~vy~Lg 84 (115)
+.+.|.|..+++ |- .++..+++...+....+++. .-.....|+||.. ++|..+=+.++.|++.++.
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~-------g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d 110 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF-------GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD 110 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-------SCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC-------CCCCcceEEEEeCCCEEEEEECCCCEEEEEecC
Confidence 677788876655 21 46666666554444333321 1235668999965 6666666778899999983
No 166
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=29.91 E-value=88 Score=25.59 Aligned_cols=34 Identities=26% Similarity=0.449 Sum_probs=30.9
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
..|-=+-|.|.+.-+++|-+++-|-|.+||+...
T Consensus 258 ~~DFPVamqvs~kygviyviTK~G~ihlyDleTg 291 (365)
T 2xzh_A 258 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG 291 (365)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC
T ss_pred cCCceEEEEecccCCEEEEEeCCcEEEEEEcccC
Confidence 4677889999999999999999999999999755
No 167
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=28.72 E-value=97 Score=21.73 Aligned_cols=28 Identities=7% Similarity=0.017 Sum_probs=23.4
Q ss_pred EEEEeCCCceEEEecC-CCeEEEEEecCC
Q psy7671 59 QICIDNSRNVLYTRSE-LGLISVYDLYER 86 (115)
Q Consensus 59 qi~vD~sR~lLYtLs~-~s~I~vy~Lg~~ 86 (115)
.+++++..+.||+-+. ++.|.+|++...
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 72 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLE 72 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSS
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCC
Confidence 8899999988888877 789999998643
No 168
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=27.90 E-value=63 Score=22.05 Aligned_cols=32 Identities=13% Similarity=0.179 Sum_probs=25.6
Q ss_pred CceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 55 DSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 55 ~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
..+..|++|+..++..+=+.++.|.+|++...
T Consensus 234 ~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 234 NTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 46788999998886667677899999998643
No 169
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=27.77 E-value=50 Score=28.26 Aligned_cols=28 Identities=18% Similarity=0.285 Sum_probs=25.0
Q ss_pred CCceeEEEEeCCCceEEEecCCCeEEEE
Q psy7671 54 EDSLAQICIDNSRNVLYTRSELGLISVY 81 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~~s~I~vy 81 (115)
..+|..|.+|..++-||..+++..++|-
T Consensus 469 ~~pI~~L~ls~~~~~LYV~s~~~V~qVP 496 (565)
T 3oky_B 469 DKRIMGMQLDRASGSLYVAFSTCVIKVP 496 (565)
T ss_dssp CCCCCEEEEEGGGTEEEEECSSCEEEEE
T ss_pred CCceEEEEEcCCCCEEEEEecCeEEEee
Confidence 5689999999999999999999888764
No 170
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=27.07 E-value=67 Score=27.84 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=29.1
Q ss_pred CCceeEEEEeCCCceEEEecCCCeEEEEEecC
Q psy7671 54 EDSLAQICIDNSRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
++.|..+.+++..+.|++=+.+++|++|++..
T Consensus 98 ~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~ 129 (902)
T 2oaj_A 98 PGKITSIDTDASLDWMLIGLQNGSMIVYDIDR 129 (902)
T ss_dssp SSCEEEEECCTTCSEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 46789999999999999999999999999964
No 171
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=26.70 E-value=1.2e+02 Score=22.29 Aligned_cols=37 Identities=27% Similarity=0.353 Sum_probs=24.3
Q ss_pred eeEEEEeCCCceEE-EecCCCeEEEEEecCCCCceeeEEE
Q psy7671 57 LAQICIDNSRNVLY-TRSELGLISVYDLYERGQGFRSLVS 95 (115)
Q Consensus 57 I~qi~vD~sR~lLY-tLs~~s~I~vy~Lg~~g~~~~~v~s 95 (115)
-..|++|...+.|| +=+.++.|.++++ +|...+.+.+
T Consensus 166 P~gla~d~~~~~lY~~D~~~~~I~~~d~--dg~~~~~~~~ 203 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVDSKLHSISSIDV--NGGNRKTILE 203 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEET--TSCSCEEEEE
T ss_pred ceEEEEeccCCEEEEEECCCCeEEEEec--CCCceEEEee
Confidence 34789997666665 4456679999998 4544444443
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=26.36 E-value=1.1e+02 Score=21.52 Aligned_cols=33 Identities=21% Similarity=0.205 Sum_probs=25.9
Q ss_pred ceeEEEEeCCCceEEEecCCCeEEEEEecCCCC
Q psy7671 56 SLAQICIDNSRNVLYTRSELGLISVYDLYERGQ 88 (115)
Q Consensus 56 ~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g~ 88 (115)
....+++++..++|++=+.++.|.+|++..+|.
T Consensus 173 ~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~ 205 (296)
T 3e5z_A 173 KPNGLAFLPSGNLLVSDTGDNATHRYCLNARGE 205 (296)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEEEECSSSC
T ss_pred CCccEEECCCCCEEEEeCCCCeEEEEEECCCCc
Confidence 345688998888887777789999999975553
No 173
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=26.32 E-value=67 Score=25.78 Aligned_cols=29 Identities=21% Similarity=0.159 Sum_probs=23.8
Q ss_pred Ccee-EEEEeCCCceEEEecCCCeEEEEEe
Q psy7671 55 DSLA-QICIDNSRNVLYTRSELGLISVYDL 83 (115)
Q Consensus 55 ~~I~-qi~vD~sR~lLYtLs~~s~I~vy~L 83 (115)
+.++ .++.-+..+.|++=+.+++|++|++
T Consensus 326 ~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 326 DQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 4444 5788888999999999999999986
No 174
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=26.18 E-value=1.2e+02 Score=24.23 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=24.6
Q ss_pred CceeEEEEeCCC-ceEEEecC-CCeEEEEEecC
Q psy7671 55 DSLAQICIDNSR-NVLYTRSE-LGLISVYDLYE 85 (115)
Q Consensus 55 ~~I~qi~vD~sR-~lLYtLs~-~s~I~vy~Lg~ 85 (115)
.++..|.+++.. ++||+... .++|.|||...
T Consensus 331 ~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 331 HEIDSINVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp EEECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred CCcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 356688898886 59999765 78999999854
No 175
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=25.91 E-value=2.3e+02 Score=23.35 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=24.2
Q ss_pred CceeEEEEeCCCceEEEecCCCeEEEEEecCCCCc
Q psy7671 55 DSLAQICIDNSRNVLYTRSELGLISVYDLYERGQG 89 (115)
Q Consensus 55 ~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g~~ 89 (115)
+.+..+..+ ...++++...++..++|.+..+|+.
T Consensus 364 ~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~ 397 (741)
T 1yr2_A 364 DNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKP 397 (741)
T ss_dssp SEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCE
T ss_pred CeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCc
Confidence 345567777 5678888888888888877655543
No 176
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=25.89 E-value=81 Score=24.19 Aligned_cols=30 Identities=20% Similarity=0.342 Sum_probs=25.2
Q ss_pred ceeEEEEeCCCc-eEEEec-CCCeEEEEEecC
Q psy7671 56 SLAQICIDNSRN-VLYTRS-ELGLISVYDLYE 85 (115)
Q Consensus 56 ~I~qi~vD~sR~-lLYtLs-~~s~I~vy~Lg~ 85 (115)
....|.+++..+ +||+.. .+++|.|||+..
T Consensus 319 ~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 319 DVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred CcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 467888998888 999998 489999999854
No 177
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=25.82 E-value=2e+02 Score=21.10 Aligned_cols=29 Identities=31% Similarity=0.406 Sum_probs=21.8
Q ss_pred ceeEEEEeC-CCceEEEecCCCeEEEEEec
Q psy7671 56 SLAQICIDN-SRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 56 ~I~qi~vD~-sR~lLYtLs~~s~I~vy~Lg 84 (115)
....|++|. .+++..+-..++.|.++++.
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 346889996 55655566788999999873
No 178
>2xz8_A Peptidoglycan-recognition protein LF; immune system, innate immunity, PGRP-LF; HET: PG4; 1.94A {Drosophila melanogaster}
Probab=25.58 E-value=33 Score=24.35 Aligned_cols=13 Identities=38% Similarity=0.828 Sum_probs=11.3
Q ss_pred EEecCCCCEEEEE
Q psy7671 5 FMGGTDGNLYEIK 17 (115)
Q Consensus 5 F~gG~DG~lyEl~ 17 (115)
|+-+.||+|||=.
T Consensus 74 FlI~~dG~VyeGR 86 (150)
T 2xz8_A 74 FVAAGDENIYEAR 86 (150)
T ss_dssp EEECTTSCEEESS
T ss_pred EEEcCCCeEEECC
Confidence 8889999999954
No 179
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=25.54 E-value=1.1e+02 Score=23.05 Aligned_cols=28 Identities=18% Similarity=0.252 Sum_probs=20.4
Q ss_pred eeEEEEeC-CCceEEEecCCCeEEEEEec
Q psy7671 57 LAQICIDN-SRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 57 I~qi~vD~-sR~lLYtLs~~s~I~vy~Lg 84 (115)
-.-|++|+ .+.+.++=+.++.|.++++.
T Consensus 205 PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 205 PNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 35699995 55555566777899999973
No 180
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=25.03 E-value=97 Score=26.58 Aligned_cols=31 Identities=6% Similarity=0.115 Sum_probs=28.5
Q ss_pred ceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 56 SLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 56 ~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
.+..++.-+..+.|++=+++++|++|++..+
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 5999999999999999999999999999653
No 181
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=24.51 E-value=83 Score=25.35 Aligned_cols=31 Identities=19% Similarity=0.364 Sum_probs=25.8
Q ss_pred ceeEEEEeCCCc-eEEEec-CCCeEEEEEecCC
Q psy7671 56 SLAQICIDNSRN-VLYTRS-ELGLISVYDLYER 86 (115)
Q Consensus 56 ~I~qi~vD~sR~-lLYtLs-~~s~I~vy~Lg~~ 86 (115)
.-..|++++.++ +||+.. .+++|.|+|+...
T Consensus 371 ~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 371 EIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 456778899998 999999 5899999998543
No 182
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=24.30 E-value=1.3e+02 Score=23.18 Aligned_cols=37 Identities=27% Similarity=0.275 Sum_probs=25.0
Q ss_pred ceeEEEEeCCCceEEEe-cCCCeEEEEEecCCCCceeeEE
Q psy7671 56 SLAQICIDNSRNVLYTR-SELGLISVYDLYERGQGFRSLV 94 (115)
Q Consensus 56 ~I~qi~vD~sR~lLYtL-s~~s~I~vy~Lg~~g~~~~~v~ 94 (115)
.-..|++|...+.||.- +.++.|+++++ +|...+.+.
T Consensus 247 ~P~glavd~~~~~lY~aD~~~~~I~~~d~--dG~~~~~~~ 284 (400)
T 3p5b_L 247 WPNGITLDLLSGRLYWVDSKLHSISSIDV--NGGNRKTIL 284 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEET--TSCCCEEEE
T ss_pred ceEEEEEEeCCCEEEEEECCCCEEEEEeC--CCCccEEEE
Confidence 34569999766666655 56779999998 554444444
No 183
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=24.15 E-value=82 Score=27.26 Aligned_cols=30 Identities=17% Similarity=0.262 Sum_probs=15.1
Q ss_pred CCceeEEEEeCCCceEEEecCCCeEEEEEe
Q psy7671 54 EDSLAQICIDNSRNVLYTRSELGLISVYDL 83 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~~s~I~vy~L 83 (115)
++.|..++.++..++|.+=+.+++|++|+.
T Consensus 17 ~~~V~~lafspdg~~lAsgs~Dg~I~lw~~ 46 (902)
T 2oaj_A 17 SSKPIAAAFDFTQNLLAIATVTGEVHIYGQ 46 (902)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSEEEEECS
T ss_pred CCCcEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 344555555555555555555555555543
No 184
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=23.80 E-value=1.2e+02 Score=21.22 Aligned_cols=28 Identities=21% Similarity=0.201 Sum_probs=22.6
Q ss_pred ceeEEEEeC-CCceEEEecCCCeEEEEEecC
Q psy7671 56 SLAQICIDN-SRNVLYTRSELGLISVYDLYE 85 (115)
Q Consensus 56 ~I~qi~vD~-sR~lLYtLs~~s~I~vy~Lg~ 85 (115)
.+..+++++ ..+.||+- ++.|.+|++..
T Consensus 256 ~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~ 284 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQ 284 (349)
T ss_dssp CEEEEEECSSCTTEEEEE--ESEEEEEETTT
T ss_pred cceeeEecCCCCCEEEEE--cCeEEEEECcc
Confidence 456777788 88899988 78999999854
No 185
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=23.61 E-value=3.4e+02 Score=23.62 Aligned_cols=30 Identities=30% Similarity=0.393 Sum_probs=22.6
Q ss_pred CceeEEEEeCCC-ceEEEecCCCeEEEEEec
Q psy7671 55 DSLAQICIDNSR-NVLYTRSELGLISVYDLY 84 (115)
Q Consensus 55 ~~I~qi~vD~sR-~lLYtLs~~s~I~vy~Lg 84 (115)
.....|+||... +|.++=+.++.|+++++.
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 345679999655 666677788899999984
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=23.26 E-value=79 Score=23.19 Aligned_cols=37 Identities=11% Similarity=0.291 Sum_probs=26.2
Q ss_pred CceeEEEEeCCCceEEEe-----cCCCeEEEEEecCCCCceeeE
Q psy7671 55 DSLAQICIDNSRNVLYTR-----SELGLISVYDLYERGQGFRSL 93 (115)
Q Consensus 55 ~~I~qi~vD~sR~lLYtL-----s~~s~I~vy~Lg~~g~~~~~v 93 (115)
.....|++|+..+-||.- +.++.|.+|+.. |+....+
T Consensus 267 ~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~--g~~~~~i 308 (328)
T 3dsm_A 267 TKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ--GKLIDEF 308 (328)
T ss_dssp SCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT--CCEEEEE
T ss_pred CceEEEEEcCCCCeEEEEcccccccCCEEEEECCC--CCEEEEE
Confidence 456789999866667766 467899999874 6554444
No 187
>1ts9_A Ribonuclease P protein component 1; anti-parallel, beta-sheet, alpha helix, internal salt bridge, selenomethionine, SM-fold, hydrolase; 1.70A {Archaeoglobus fulgidus} SCOP: b.137.1.1 PDB: 1tsf_A 1pc0_A
Probab=23.21 E-value=94 Score=20.68 Aligned_cols=20 Identities=20% Similarity=0.288 Sum_probs=17.5
Q ss_pred ceeEEEEeCCCceEEEecCC
Q psy7671 56 SLAQICIDNSRNVLYTRSEL 75 (115)
Q Consensus 56 ~I~qi~vD~sR~lLYtLs~~ 75 (115)
.|.-++||+++|.+--.+++
T Consensus 32 Gi~GiVV~ETkntf~I~t~~ 51 (102)
T 1ts9_A 32 GIKGEVVDETQNTLKIMTEK 51 (102)
T ss_dssp TCEEEEEEECSSEEEEEESS
T ss_pred CcEEEEEEeccceEEEEeCC
Confidence 48999999999999988844
No 188
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=22.68 E-value=2.9e+02 Score=21.93 Aligned_cols=33 Identities=21% Similarity=0.363 Sum_probs=22.5
Q ss_pred CceeEEEEeCCCceEEEecC-CCeEE------EEEecCCC
Q psy7671 55 DSLAQICIDNSRNVLYTRSE-LGLIS------VYDLYERG 87 (115)
Q Consensus 55 ~~I~qi~vD~sR~lLYtLs~-~s~I~------vy~Lg~~g 87 (115)
..+++|++++....||.++. .+.|. +|++...+
T Consensus 405 ~R~~dv~~gpDG~~Lyv~~d~~G~i~~~~~~~~~~~~~~~ 444 (454)
T 1cru_A 405 NRYRDVIASPDGNVLYVLTDTAGNVQKDDGSVTNTLENPG 444 (454)
T ss_dssp SCEEEEEECTTSSCEEEEECSSCCEECTTSCEECCCSSTT
T ss_pred CCceeEEECCCCCEEEEEECCCCCCccCCCceeEeccCCC
Confidence 58999999998776787765 45544 55554433
No 189
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=22.66 E-value=1.4e+02 Score=22.41 Aligned_cols=34 Identities=15% Similarity=0.382 Sum_probs=22.9
Q ss_pred eEEEEeC-CCceEEEecCCCeEEEEEecCCCCceeeE
Q psy7671 58 AQICIDN-SRNVLYTRSELGLISVYDLYERGQGFRSL 93 (115)
Q Consensus 58 ~qi~vD~-sR~lLYtLs~~s~I~vy~Lg~~g~~~~~v 93 (115)
-.|++|. .+.+.++=+.++.|.++++ +|...+.+
T Consensus 169 nglavd~~~~~lY~aD~~~~~I~~~d~--dG~~~~~~ 203 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADAKLNFIHKSNL--DGTNRQAV 203 (318)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEET--TSCSCEEE
T ss_pred cEEEEeccCCEEEEEECCCCEEEEEcC--CCCceEEE
Confidence 4689997 4555556677889999998 44333333
No 190
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=21.83 E-value=2.6e+02 Score=20.96 Aligned_cols=52 Identities=19% Similarity=0.203 Sum_probs=31.4
Q ss_pred ccccceEEecCCcccccchhhhhhhccCCCceeEEEEeC-CCceEEEecCCCeEEEEEec
Q psy7671 26 SASCSKVCLTSSSLTYILPTFINALITQEDSLAQICIDN-SRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 26 ~~kc~kinhT~~~~ssllPs~~~~~~~~~~~I~qi~vD~-sR~lLYtLs~~s~I~vy~Lg 84 (115)
.++..+++...+....+++ ..-.....|++|. .+++.++-+.++.|.++++.
T Consensus 94 ~~~I~r~~~~g~~~~~~~~-------~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d 146 (349)
T 3v64_C 94 LDRILRANLNGSNVEEVVS-------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD 146 (349)
T ss_dssp TTEEEEEETTSCSCEEEEC-------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEecCCCCceEEEe-------CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC
Confidence 3556666654443322221 1123446799996 56666677778899999884
No 191
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=21.75 E-value=1.8e+02 Score=21.67 Aligned_cols=40 Identities=10% Similarity=0.291 Sum_probs=26.9
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCCCCceeeE
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYERGQGFRSL 93 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~g~~~~~v 93 (115)
-.+.+.-|+.|+.++.||+-+.+. =++|.|...|+-.+++
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~-~~I~~ld~~g~v~~~i 64 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKP-AAIVEMTTNGDLIRTI 64 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETT-EEEEEEETTCCEEEEE
T ss_pred cccCcceeEEeCCCCEEEEEECCC-CeEEEEeCCCCEEEEE
Confidence 345799999999999999966652 3355555455544444
No 192
>1v76_A RNAse P protein PH1771P; RNA binding protein, archaeal RNAse P protein; 2.00A {Pyrococcus horikoshii} SCOP: b.137.1.1
Probab=21.73 E-value=1.1e+02 Score=20.02 Aligned_cols=18 Identities=28% Similarity=0.460 Sum_probs=16.8
Q ss_pred ceeEEEEeCCCceEEEec
Q psy7671 56 SLAQICIDNSRNVLYTRS 73 (115)
Q Consensus 56 ~I~qi~vD~sR~lLYtLs 73 (115)
.|.-++||+++|.+.-.+
T Consensus 34 Gi~GiVV~ET~ntf~I~t 51 (96)
T 1v76_A 34 GIEGYVIDETRNMLVIAG 51 (96)
T ss_dssp TCEEEEEEECSSEEEEES
T ss_pred CcEEEEEEeccceEEEEc
Confidence 489999999999999998
No 193
>2php_A Uncharacterized protein MJ0236; chlorine ION, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.03A {Methanocaldococcus jannaschii DSM2661} SCOP: c.74.1.2
Probab=21.67 E-value=1.2e+02 Score=22.32 Aligned_cols=37 Identities=16% Similarity=0.281 Sum_probs=31.6
Q ss_pred EEEEecCCCCc-eeeEEEecHHHHHHHHHhhhhhhhcC
Q psy7671 79 SVYDLYERGQG-FRSLVSLSEEMIVQQALKFHIVYAKL 115 (115)
Q Consensus 79 ~vy~Lg~~g~~-~~~v~s~s~~~i~~~a~~~~~~~~~~ 115 (115)
-+||.|..|++ +-.|-.-++.++++.+..+.+-|..|
T Consensus 147 vIyd~G~~GkEP~i~vfG~dp~ev~~kv~~l~~~~~~~ 184 (192)
T 2php_A 147 IIYDRGGEGKEPMIRVLGRDAIEVVKKVEVIQKIYNTL 184 (192)
T ss_dssp EEEECCBBTBCCEEEEEESSHHHHHHHHHHHHHHHHTT
T ss_pred EEEeCCCCCcCcEEEEECCCHHHHHHHHHHHHHHHHhh
Confidence 37999988876 68899999999999999999887654
No 194
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=21.63 E-value=1.5e+02 Score=22.22 Aligned_cols=29 Identities=28% Similarity=0.271 Sum_probs=22.6
Q ss_pred ceeEEEEeC-CCceEEEecCCCeEEEEEec
Q psy7671 56 SLAQICIDN-SRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 56 ~I~qi~vD~-sR~lLYtLs~~s~I~vy~Lg 84 (115)
....|++|. .+++..+=+.++.|.++++.
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~d 109 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLD 109 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECC
Confidence 456799996 66666677788999999984
No 195
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=21.41 E-value=2e+02 Score=20.71 Aligned_cols=35 Identities=9% Similarity=0.151 Sum_probs=23.5
Q ss_pred ceeEEEEeC-CCceEEEec-CCCeEEEEEecCCCCceee
Q psy7671 56 SLAQICIDN-SRNVLYTRS-ELGLISVYDLYERGQGFRS 92 (115)
Q Consensus 56 ~I~qi~vD~-sR~lLYtLs-~~s~I~vy~Lg~~g~~~~~ 92 (115)
....|++|+ ..+++.+=+ .++.|.+|+ .+|.....
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~--~~g~~~~~ 180 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFS--PSGKFVTQ 180 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEEC--TTSCEEEE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEc--CCCCEEEE
Confidence 467899999 455544544 589999998 45544433
No 196
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=21.41 E-value=1.2e+02 Score=22.64 Aligned_cols=31 Identities=13% Similarity=0.220 Sum_probs=27.8
Q ss_pred CCceeEEEEeCCCceEEEecCCCeEEEEEec
Q psy7671 54 EDSLAQICIDNSRNVLYTRSELGLISVYDLY 84 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg 84 (115)
.....-|++|+.++.||+..+++...+|.+.
T Consensus 120 N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 120 NCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp SSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred cCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 4558999999999999999999998999986
No 197
>2f2l_A Peptidoglycan-recognition protein-LC isoform LCA; protein-peptidoglycan complex, membrane protein, immune SYST; HET: NAG HSQ MLD CIT; 2.10A {Drosophila melanogaster} SCOP: d.118.1.1 PDB: 1z6i_A*
Probab=21.34 E-value=44 Score=23.67 Aligned_cols=11 Identities=55% Similarity=1.017 Sum_probs=10.0
Q ss_pred EEecCCCCEEE
Q psy7671 5 FMGGTDGNLYE 15 (115)
Q Consensus 5 F~gG~DG~lyE 15 (115)
|+-+.||.|||
T Consensus 67 flI~~dG~Iye 77 (167)
T 2f2l_A 67 FLIGGDGNVYV 77 (167)
T ss_dssp EEECTTSCEEE
T ss_pred EEEcCCCEEEE
Confidence 88899999998
No 198
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=21.21 E-value=1.5e+02 Score=25.17 Aligned_cols=34 Identities=26% Similarity=0.449 Sum_probs=30.6
Q ss_pred CCCceeEEEEeCCCceEEEecCCCeEEEEEecCC
Q psy7671 53 QEDSLAQICIDNSRNVLYTRSELGLISVYDLYER 86 (115)
Q Consensus 53 ~~~~I~qi~vD~sR~lLYtLs~~s~I~vy~Lg~~ 86 (115)
..|-=+-|.|.+.-+++|-+++-|-|.+||+...
T Consensus 257 ~~DFPvamqvs~kygviyviTK~G~i~lyDleTg 290 (494)
T 1bpo_A 257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG 290 (494)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC
T ss_pred ccCceeEEEecccCCEEEEEecCceEEEEecccc
Confidence 3577889999999999999999999999999754
No 199
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=20.71 E-value=1.1e+02 Score=24.12 Aligned_cols=30 Identities=10% Similarity=-0.085 Sum_probs=23.2
Q ss_pred CCceeEEEEeCCCceEEEecC-CCeEEEEEe
Q psy7671 54 EDSLAQICIDNSRNVLYTRSE-LGLISVYDL 83 (115)
Q Consensus 54 ~~~I~qi~vD~sR~lLYtLs~-~s~I~vy~L 83 (115)
..+|-.++..+..+.|...+. ++++++|++
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~ 51 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLY 51 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEE
Confidence 346788888877666666665 899999998
No 200
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=20.44 E-value=90 Score=20.40 Aligned_cols=21 Identities=10% Similarity=-0.110 Sum_probs=14.5
Q ss_pred ce-EEEecCCCCEEEEEEecCC
Q psy7671 2 IV-VFMGGTDGNLYEIKYQRDA 22 (115)
Q Consensus 2 GR-IF~gG~DG~lyEl~Y~~~~ 22 (115)
|| +|+-..||+++||....++
T Consensus 105 G~~~~~~DPdG~~iel~~~~~~ 126 (148)
T 3rhe_A 105 GYTFVGVDPDEHRLRIFCLKRT 126 (148)
T ss_dssp EEEEEEECTTCCEEEEEEEC--
T ss_pred CcEEEEECCCCCEEEEEEcChh
Confidence 45 4455789999999887553
No 201
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=20.11 E-value=1.1e+02 Score=21.82 Aligned_cols=30 Identities=10% Similarity=0.197 Sum_probs=23.5
Q ss_pred eEEEEeCCCceEEEecCC------CeEEEEEecCCC
Q psy7671 58 AQICIDNSRNVLYTRSEL------GLISVYDLYERG 87 (115)
Q Consensus 58 ~qi~vD~sR~lLYtLs~~------s~I~vy~Lg~~g 87 (115)
..+++++..+.||.-... +.|.+|++..++
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 357888888889988765 789999997543
No 202
>1lba_A T7 lysozyme; hydrolase(acting on linear amides); 2.20A {Enterobacteria phage T7} SCOP: d.118.1.1 PDB: 1aro_L
Probab=20.07 E-value=45 Score=22.83 Aligned_cols=24 Identities=13% Similarity=0.112 Sum_probs=19.9
Q ss_pred EEecCCCCEEEEEEecCCCccccc
Q psy7671 5 FMGGTDGNLYEIKYQRDASWFSAS 28 (115)
Q Consensus 5 F~gG~DG~lyEl~Y~~~~~Wf~~k 28 (115)
|+-+.||.|||..-....+|-.+.
T Consensus 44 flI~~dG~I~q~~~~~~~g~Ha~~ 67 (146)
T 1lba_A 44 FIIKRDGTVEAGRDEMAVGSHAKG 67 (146)
T ss_dssp EEECTTSCEEECSCTTBCCSSSTT
T ss_pred EEECCCCEEEECCCCcceeCccCC
Confidence 677889999999998888896543
Done!