Your job contains 1 sequence.
>psy7671
MIVVFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQI
CIDNSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQALKFHIVYAKL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7671
(115 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2QVP9 - symbol:NUP155 "Uncharacterized protein... 262 1.6e-21 1
UNIPROTKB|E9PF10 - symbol:NUP155 "Nuclear pore complex pr... 264 2.3e-21 1
UNIPROTKB|O75694 - symbol:NUP155 "Nuclear pore complex pr... 264 2.4e-21 1
UNIPROTKB|F1NNT9 - symbol:NUP155 "Uncharacterized protein... 263 3.0e-21 1
UNIPROTKB|F1NPS0 - symbol:NUP155 "Uncharacterized protein... 263 3.1e-21 1
UNIPROTKB|F1SN95 - symbol:NUP155 "Uncharacterized protein... 263 3.3e-21 1
UNIPROTKB|F6XTD9 - symbol:NUP155 "Uncharacterized protein... 262 3.9e-21 1
MGI|MGI:2181182 - symbol:Nup155 "nucleoporin 155" species... 259 8.2e-21 1
ZFIN|ZDB-GENE-040426-711 - symbol:nup155 "nucleoporin 155... 259 8.2e-21 1
UNIPROTKB|F1MNT1 - symbol:NUP155 "Uncharacterized protein... 258 1.1e-20 1
RGD|621199 - symbol:Nup155 "nucleoporin 155" species:1011... 256 1.7e-20 1
UNIPROTKB|D4A0V4 - symbol:Nup155 "Nuclear pore complex pr... 256 1.7e-20 1
UNIPROTKB|P37199 - symbol:Nup155 "Nuclear pore complex pr... 256 1.7e-20 1
FB|FBgn0021761 - symbol:Nup154 "Nucleoporin 154kD" specie... 193 8.6e-14 1
POMBASE|SPAC890.06 - symbol:nup155 "nucleoporin Nup155" s... 170 2.3e-11 1
ASPGD|ASPL0000004413 - symbol:nup170 species:162425 "Emer... 145 1.1e-08 1
TAIR|locus:2006802 - symbol:NUP155 "nucleoporin 155" spec... 130 4.8e-07 1
DICTYBASE|DDB_G0291163 - symbol:nup155 "nucleoporin 155" ... 129 6.6e-07 1
SGD|S000000175 - symbol:NUP170 "Subunit of the inner ring... 120 8.8e-07 2
SGD|S000000907 - symbol:NUP157 "Subunit of the inner ring... 125 1.5e-06 1
WB|WBGene00003794 - symbol:npp-8 species:6239 "Caenorhabd... 118 6.4e-06 1
UNIPROTKB|G0ZGU4 - symbol:NUP170 "Nup170p" species:285224... 118 8.7e-06 1
CGD|CAL0001635 - symbol:orf19.2485 species:5476 "Candida ... 116 1.4e-05 1
>UNIPROTKB|E2QVP9 [details] [associations]
symbol:NUP155 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017056 "structural constituent of nuclear
pore" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913 GO:GO:0017056
InterPro:IPR014908 PANTHER:PTHR10350 Pfam:PF08801
Ensembl:ENSCAFT00000029657 Uniprot:E2QVP9
Length = 772
Score = 262 (97.3 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 47/102 (46%), Positives = 70/102 (68%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+ G DG LYE+ YQ +A WFS C K+ + S+L++++P+ + +++D + QI ID
Sbjct: 230 IFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSALSFLVPSLLQFTFSEDDPIVQIAID 289
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQA 105
NSRN+LYTRSE G+I VYDL + GQG + S+S+ IV A
Sbjct: 290 NSRNILYTRSEKGVIQVYDLGQDGQGMSRVASVSQNSIVSAA 331
>UNIPROTKB|E9PF10 [details] [associations]
symbol:NUP155 "Nuclear pore complex protein Nup155"
species:9606 "Homo sapiens" [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0017056 "structural constituent of nuclear pore"
evidence=IEA] InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913
EMBL:AC025449 GO:GO:0017056 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 HGNC:HGNC:8063
EMBL:AC008832 EMBL:AC117532 IPI:IPI00965680
ProteinModelPortal:E9PF10 Ensembl:ENST00000513532 UCSC:uc010iuz.1
ArrayExpress:E9PF10 Bgee:E9PF10 Uniprot:E9PF10
Length = 1327
Score = 264 (98.0 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 48/102 (47%), Positives = 70/102 (68%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+ G DG LYE+ YQ +A WFS C K+ + SSL++++P+ + +++D + QI ID
Sbjct: 226 IFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPILQIAID 285
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQA 105
NSRN+LYTRSE G+I VYDL + GQG + S+S+ IV A
Sbjct: 286 NSRNILYTRSEKGVIQVYDLGQDGQGMSRVASVSQNAIVSAA 327
>UNIPROTKB|O75694 [details] [associations]
symbol:NUP155 "Nuclear pore complex protein Nup155"
species:9606 "Homo sapiens" [GO:0017056 "structural constituent of
nuclear pore" evidence=IEA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0086014 "regulation of atrial cardiac muscle cell
action potential" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0005215 "transporter activity" evidence=TAS] [GO:0005635
"nuclear envelope" evidence=IDA;TAS] [GO:0006998 "nuclear envelope
organization" evidence=IDA] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0008645 "hexose transport" evidence=TAS]
[GO:0010827 "regulation of glucose transport" evidence=TAS]
[GO:0015758 "glucose transport" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_111217 Reactome:REACT_15518
InterPro:IPR004870 GO:GO:0005635 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0016032 GO:GO:0044281 GO:GO:0015031
GO:GO:0005975 GO:GO:0031965 GO:GO:0005643 GO:GO:0019221
GO:GO:0015758 GO:GO:0006913 GO:GO:0010827 GO:GO:0055085
GO:GO:0005215 Orphanet:334 GO:GO:0006998 GO:GO:0051028
GO:GO:0017056 eggNOG:COG5308 KO:K14312 InterPro:IPR007187
InterPro:IPR014908 PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801
EMBL:AJ007558 EMBL:AF165926 EMBL:AB018334 EMBL:BC039257
EMBL:AL117585 IPI:IPI00026625 IPI:IPI00376609 PIR:T17317
RefSeq:NP_004289.1 RefSeq:NP_705618.1 UniGene:Hs.547696
ProteinModelPortal:O75694 IntAct:O75694 MINT:MINT-1200468
STRING:O75694 PhosphoSite:O75694 PaxDb:O75694 PRIDE:O75694
Ensembl:ENST00000231498 Ensembl:ENST00000381843 GeneID:9631
KEGG:hsa:9631 UCSC:uc003jkt.1 CTD:9631 GeneCards:GC05M037327
HGNC:HGNC:8063 HPA:HPA037774 HPA:HPA037775 MIM:606694
neXtProt:NX_O75694 PharmGKB:PA31849 HOGENOM:HOG000043927
HOVERGEN:HBG052680 InParanoid:O75694 OMA:SSDRMHA OrthoDB:EOG4VHK5K
PhylomeDB:O75694 GenomeRNAi:9631 NextBio:36143 ArrayExpress:O75694
Bgee:O75694 CleanEx:HS_NUP155 Genevestigator:O75694
GermOnline:ENSG00000113569 Uniprot:O75694
Length = 1391
Score = 264 (98.0 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 48/102 (47%), Positives = 70/102 (68%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+ G DG LYE+ YQ +A WFS C K+ + SSL++++P+ + +++D + QI ID
Sbjct: 226 IFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPILQIAID 285
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQA 105
NSRN+LYTRSE G+I VYDL + GQG + S+S+ IV A
Sbjct: 286 NSRNILYTRSEKGVIQVYDLGQDGQGMSRVASVSQNAIVSAA 327
>UNIPROTKB|F1NNT9 [details] [associations]
symbol:NUP155 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0017056
"structural constituent of nuclear pore" evidence=IEA]
InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913 GO:GO:0017056
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 GeneTree:ENSGT00390000016532
EMBL:AADN02052221 EMBL:AADN02052222 EMBL:AADN02052223
IPI:IPI00820543 Ensembl:ENSGALT00000039092 ArrayExpress:F1NNT9
Uniprot:F1NNT9
Length = 1348
Score = 263 (97.6 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 47/102 (46%), Positives = 70/102 (68%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+ G DG LYE+ YQ +A WFS C K+ + S+L++++P+ + +++D + QI ID
Sbjct: 224 IFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSALSFLIPSLLQFTFSEDDPVVQIAID 283
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQA 105
NSRN+LYTRSE G++ VYDL + GQG + SLS+ IV A
Sbjct: 284 NSRNILYTRSEKGVLQVYDLGQDGQGMARVTSLSQNAIVSAA 325
>UNIPROTKB|F1NPS0 [details] [associations]
symbol:NUP155 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] [GO:0006998 "nuclear
envelope organization" evidence=IEA] [GO:0086014 "regulation of
atrial cardiac muscle cell action potential" evidence=IEA]
InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913 GO:GO:0006998
GO:GO:0017056 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 OMA:SSDRMHA
GeneTree:ENSGT00390000016532 EMBL:AADN02052221 EMBL:AADN02052222
EMBL:AADN02052223 IPI:IPI00578913 Ensembl:ENSGALT00000005842
ArrayExpress:F1NPS0 Uniprot:F1NPS0
Length = 1394
Score = 263 (97.6 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 47/102 (46%), Positives = 70/102 (68%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+ G DG LYE+ YQ +A WFS C K+ + S+L++++P+ + +++D + QI ID
Sbjct: 224 IFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSALSFLIPSLLQFTFSEDDPVVQIAID 283
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQA 105
NSRN+LYTRSE G++ VYDL + GQG + SLS+ IV A
Sbjct: 284 NSRNILYTRSEKGVLQVYDLGQDGQGMARVTSLSQNAIVSAA 325
>UNIPROTKB|F1SN95 [details] [associations]
symbol:NUP155 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0086014 "regulation of atrial cardiac muscle cell
action potential" evidence=IEA] [GO:0006998 "nuclear envelope
organization" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0017056 "structural constituent of nuclear pore"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913 GO:GO:0006998
GO:GO:0017056 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 OMA:SSDRMHA
GeneTree:ENSGT00390000016532 EMBL:CU856294 EMBL:CU928413
Ensembl:ENSSSCT00000018343 Uniprot:F1SN95
Length = 1460
Score = 263 (97.6 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 47/102 (46%), Positives = 69/102 (67%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+ G DG LYE+ YQ +A WFS C K+ + SSL++++P+ + +++D + QI +D
Sbjct: 288 IFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPIVQIAVD 347
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQA 105
NSRN+LYTRSE G+I VYDL GQG + S+S+ IV A
Sbjct: 348 NSRNILYTRSEKGVIQVYDLGHDGQGMNRVASVSQNSIVSAA 389
>UNIPROTKB|F6XTD9 [details] [associations]
symbol:NUP155 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0017056 "structural constituent of nuclear
pore" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913 GO:GO:0017056
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 OMA:SSDRMHA GeneTree:ENSGT00390000016532
Ensembl:ENSCAFT00000029657 EMBL:AAEX03003166 Uniprot:F6XTD9
Length = 1390
Score = 262 (97.3 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 47/102 (46%), Positives = 70/102 (68%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+ G DG LYE+ YQ +A WFS C K+ + S+L++++P+ + +++D + QI ID
Sbjct: 226 IFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSALSFLVPSLLQFTFSEDDPIVQIAID 285
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQA 105
NSRN+LYTRSE G+I VYDL + GQG + S+S+ IV A
Sbjct: 286 NSRNILYTRSEKGVIQVYDLGQDGQGMSRVASVSQNSIVSAA 327
>MGI|MGI:2181182 [details] [associations]
symbol:Nup155 "nucleoporin 155" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IMP] [GO:0006606 "protein
import into nucleus" evidence=IMP] [GO:0006810 "transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006998 "nuclear envelope organization"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017056 "structural
constituent of nuclear pore" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0086014 "regulation of atrial cardiac
muscle cell action potential" evidence=IMP] InterPro:IPR004870
MGI:MGI:2181182 GO:GO:0031965 GO:GO:0005643 GO:GO:0006998
GO:GO:0006606 GO:GO:0006406 GO:GO:0086014 GO:GO:0017056
eggNOG:COG5308 KO:K14312 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 CTD:9631
HOVERGEN:HBG052680 OMA:SSDRMHA OrthoDB:EOG4VHK5K EMBL:AF322375
IPI:IPI00453821 RefSeq:NP_573490.3 UniGene:Mm.295168
ProteinModelPortal:Q99P88 IntAct:Q99P88 STRING:Q99P88
PhosphoSite:Q99P88 PaxDb:Q99P88 PRIDE:Q99P88
Ensembl:ENSMUST00000163765 GeneID:170762 KEGG:mmu:170762
GeneTree:ENSGT00390000016532 InParanoid:Q99P88 NextBio:370370
Bgee:Q99P88 CleanEx:MM_NUP155 Genevestigator:Q99P88
GermOnline:ENSMUSG00000022142 Uniprot:Q99P88
Length = 1391
Score = 259 (96.2 bits), Expect = 8.2e-21, P = 8.2e-21
Identities = 48/102 (47%), Positives = 69/102 (67%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+ G DG LYE+ YQ +A WFS C K+ + SSL++++P+ + +++D + QI ID
Sbjct: 226 IFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPIVQIEID 285
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQA 105
NSRN+LYTRSE G+I VYDL GQG + S+S+ IV A
Sbjct: 286 NSRNILYTRSEKGVIQVYDLGHDGQGMSRVASVSQNAIVSAA 327
>ZFIN|ZDB-GENE-040426-711 [details] [associations]
symbol:nup155 "nucleoporin 155" species:7955 "Danio
rerio" [GO:0005643 "nuclear pore" evidence=IEA;IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0017056 "structural
constituent of nuclear pore" evidence=IEA] InterPro:IPR004870
ZFIN:ZDB-GENE-040426-711 GO:GO:0005643 GO:GO:0006913 GO:GO:0017056
eggNOG:COG5308 KO:K14312 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 CTD:9631
HOGENOM:HOG000043927 HOVERGEN:HBG052680 OrthoDB:EOG4VHK5K
EMBL:BC045339 IPI:IPI00500451 RefSeq:NP_956450.1 UniGene:Dr.14749
STRING:Q7ZW07 PRIDE:Q7ZW07 GeneID:393125 KEGG:dre:393125
InParanoid:Q7ZW07 NextBio:20814197 ArrayExpress:Q7ZW07 Bgee:Q7ZW07
Uniprot:Q7ZW07
Length = 1391
Score = 259 (96.2 bits), Expect = 8.2e-21, P = 8.2e-21
Identities = 46/102 (45%), Positives = 69/102 (67%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+FM G DG LYE+ YQ +A WFS C K+ + SSL++++P+ + +++D + QI +D
Sbjct: 218 IFMAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLIPSLLQFSFSEDDPVVQIAVD 277
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQA 105
NSRN+LYTRSE G++ VYDL GQG + ++S+ IV A
Sbjct: 278 NSRNILYTRSEKGVLQVYDLGADGQGMSRVAAISQSSIVSAA 319
>UNIPROTKB|F1MNT1 [details] [associations]
symbol:NUP155 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0086014 "regulation of atrial cardiac muscle cell
action potential" evidence=IEA] [GO:0006998 "nuclear envelope
organization" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0017056 "structural constituent of nuclear pore"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913 GO:GO:0006998
GO:GO:0017056 KO:K14312 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 CTD:9631 OMA:SSDRMHA
GeneTree:ENSGT00390000016532 EMBL:DAAA02050616 IPI:IPI00710810
RefSeq:NP_001179036.1 UniGene:Bt.19254 PRIDE:F1MNT1
Ensembl:ENSBTAT00000003193 GeneID:506738 KEGG:bta:506738
NextBio:20867733 Uniprot:F1MNT1
Length = 1391
Score = 258 (95.9 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 46/102 (45%), Positives = 68/102 (66%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+ G DG LYE+ YQ +A WFS C K+ + S L++++P+ + +++D + QI +D
Sbjct: 226 IFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSPLSFLVPSLLQFTFSEDDPIVQIAVD 285
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQA 105
NSRN+LYTRSE G+I VYDL GQG + S+S+ IV A
Sbjct: 286 NSRNILYTRSEKGVIQVYDLGHDGQGMNRVASVSQNSIVSAA 327
>RGD|621199 [details] [associations]
symbol:Nup155 "nucleoporin 155" species:10116 "Rattus norvegicus"
[GO:0005635 "nuclear envelope" evidence=ISO] [GO:0005643 "nuclear
pore" evidence=IEA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0006606 "protein import into nucleus"
evidence=IEA;ISO] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006998 "nuclear envelope organization"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0086014 "regulation of atrial cardiac
muscle cell action potential" evidence=IEA;ISO] InterPro:IPR004870
RGD:621199 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0006913
GO:GO:0051028 GO:GO:0017056 eggNOG:COG5308 KO:K14312
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 CTD:9631 HOGENOM:HOG000043927
HOVERGEN:HBG052680 EMBL:Z21780 IPI:IPI00203525 PIR:A45455
RefSeq:NP_446404.1 UniGene:Rn.11328 STRING:P37199
PhosphoSite:P37199 PRIDE:P37199 GeneID:117021 KEGG:rno:117021
NextBio:619775 ArrayExpress:P37199 Genevestigator:P37199
GermOnline:ENSRNOG00000013411 Uniprot:P37199
Length = 1390
Score = 256 (95.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 47/99 (47%), Positives = 68/99 (68%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+ G DG LYE+ YQ +A WFS C K+ + SSL++++P+ + +++D + QI ID
Sbjct: 225 IFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPIVQIEID 284
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIV 102
NSRN+LYTRSE G+I VYDL GQG + S+S+ IV
Sbjct: 285 NSRNILYTRSEKGVIQVYDLGHDGQGMSRVASVSQNAIV 323
>UNIPROTKB|D4A0V4 [details] [associations]
symbol:Nup155 "Nuclear pore complex protein Nup155"
species:10116 "Rattus norvegicus" [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0015288 "porin activity" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore" evidence=IEA]
InterPro:IPR004870 RGD:621199 GO:GO:0005643 GO:GO:0006913
EMBL:CH474048 GO:GO:0006998 GO:GO:0015288 GO:GO:0017056
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 OrthoDB:EOG4VHK5K IPI:IPI00203525
UniGene:Rn.11328 Ensembl:ENSRNOT00000019606 Uniprot:D4A0V4
Length = 1390
Score = 256 (95.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 47/99 (47%), Positives = 68/99 (68%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+ G DG LYE+ YQ +A WFS C K+ + SSL++++P+ + +++D + QI ID
Sbjct: 225 IFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPIVQIEID 284
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIV 102
NSRN+LYTRSE G+I VYDL GQG + S+S+ IV
Sbjct: 285 NSRNILYTRSEKGVIQVYDLGHDGQGMSRVASVSQNAIV 323
>UNIPROTKB|P37199 [details] [associations]
symbol:Nup155 "Nuclear pore complex protein Nup155"
species:10116 "Rattus norvegicus" [GO:0017056 "structural
constituent of nuclear pore" evidence=IEA] InterPro:IPR004870
RGD:621199 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0006913
GO:GO:0051028 GO:GO:0017056 eggNOG:COG5308 KO:K14312
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 CTD:9631 HOGENOM:HOG000043927
HOVERGEN:HBG052680 EMBL:Z21780 IPI:IPI00203525 PIR:A45455
RefSeq:NP_446404.1 UniGene:Rn.11328 STRING:P37199
PhosphoSite:P37199 PRIDE:P37199 GeneID:117021 KEGG:rno:117021
NextBio:619775 ArrayExpress:P37199 Genevestigator:P37199
GermOnline:ENSRNOG00000013411 Uniprot:P37199
Length = 1390
Score = 256 (95.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 47/99 (47%), Positives = 68/99 (68%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+ G DG LYE+ YQ +A WFS C K+ + SSL++++P+ + +++D + QI ID
Sbjct: 225 IFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPIVQIEID 284
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIV 102
NSRN+LYTRSE G+I VYDL GQG + S+S+ IV
Sbjct: 285 NSRNILYTRSEKGVIQVYDLGHDGQGMSRVASVSQNAIV 323
>FB|FBgn0021761 [details] [associations]
symbol:Nup154 "Nucleoporin 154kD" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IDA] [GO:0005643
"nuclear pore" evidence=IEA;ISS;NAS] [GO:0006913 "nucleocytoplasmic
transport" evidence=IEA] [GO:0017056 "structural constituent of
nuclear pore" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IDA] InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913
GO:GO:0017056 eggNOG:COG5308 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 EMBL:Y17111 PIR:T13991
ProteinModelPortal:O62536 STRING:O62536 PaxDb:O62536 PRIDE:O62536
FlyBase:FBgn0021761 InParanoid:O62536 OrthoDB:EOG4V15FN
ArrayExpress:O62536 Bgee:O62536 Uniprot:O62536
Length = 1365
Score = 193 (73.0 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 38/103 (36%), Positives = 63/103 (61%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICID 63
+F+GG DG LYEI YQ ++SWF C K+ L+ ++Y++P+F+ + ++ D + I ID
Sbjct: 205 IFLGGRDGCLYEIYYQAESSWFGKRCKKINLSQGLVSYMVPSFLK-VFSEVDPIEHIEID 263
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQAL 106
NSR +LY +E G+I +D+ R L +++ I QA+
Sbjct: 264 NSRKLLYVLTEKGVIEAWDISTSYTTARRLGRITQNDITNQAV 306
>POMBASE|SPAC890.06 [details] [associations]
symbol:nup155 "nucleoporin Nup155" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006407 "rRNA export from
nucleus" evidence=ISO] [GO:0006913 "nucleocytoplasmic transport"
evidence=IC] [GO:0017056 "structural constituent of nuclear pore"
evidence=IEA] InterPro:IPR004870 InterPro:IPR015943
PomBase:SPAC890.06 GO:GO:0005737 EMBL:CU329670 Gene3D:2.130.10.10
GO:GO:0005643 GO:GO:0017056 EMBL:AB027888 PIR:T50262
RefSeq:NP_594824.1 STRING:Q9URX8 EnsemblFungi:SPAC890.06.1
GeneID:2543502 KEGG:spo:SPAC890.06 eggNOG:COG5308 KO:K14312
OMA:GRIANAW OrthoDB:EOG4HX884 NextBio:20804512 GO:GO:0006407
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 Uniprot:Q9URX8
Length = 1315
Score = 170 (64.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 33/85 (38%), Positives = 48/85 (56%)
Query: 3 VVFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICI 62
+ F G D NLYE YQ + WFS CSK+ +T S +P+F + T D + QI +
Sbjct: 195 IFFSGNKDPNLYEFSYQLEEGWFSRRCSKINITGSVFDNFIPSFFS-FGTHGDGIKQIAV 253
Query: 63 DNSRNVLYTRSELGLISVYDLYERG 87
D+SR++LY E +S Y+L + G
Sbjct: 254 DDSRSLLYVLRETSSVSCYELTKNG 278
>ASPGD|ASPL0000004413 [details] [associations]
symbol:nup170 species:162425 "Emericella nidulans"
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0017056 "structural constituent of nuclear pore"
evidence=IEA] InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913
EMBL:BN001301 GO:GO:0017056 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 OMA:ENGYEET
EnsemblFungi:CADANIAT00007531 Uniprot:C8V1X8
Length = 1346
Score = 145 (56.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 28/85 (32%), Positives = 49/85 (57%)
Query: 3 VVFMGGTDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQICI 62
+ F G +D ++YE+ YQ++ WF CSK+ TSS ++ + P+ ++ + + Q+ +
Sbjct: 250 IFFAGSSDNDVYELTYQQEEKWFQGRCSKINHTSSRISQLAPS-LSFTQRPSEQVVQMVM 308
Query: 63 DNSRNVLYTRSELGLISVYDLYERG 87
D+SR +LYT S I V+ L G
Sbjct: 309 DDSRRLLYTLSSASTIRVFHLRADG 333
>TAIR|locus:2006802 [details] [associations]
symbol:NUP155 "nucleoporin 155" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0005643 "nuclear
pore" evidence=IEA;ISS] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA;ISS] [GO:0017056 "structural constituent of nuclear
pore" evidence=IEA] [GO:0005487 "nucleocytoplasmic transporter
activity" evidence=ISS] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] InterPro:IPR004870 EMBL:CP002684
GO:GO:0005886 GO:GO:0009506 GO:GO:0009507 GO:GO:0005730
GO:GO:0005643 GO:GO:0017056 KO:K14312 InterPro:IPR007187
InterPro:IPR014908 PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801
GO:GO:0005487 IPI:IPI00538745 RefSeq:NP_172938.2 UniGene:At.41950
PRIDE:F4HXV6 EnsemblPlants:AT1G14850.1 GeneID:838050
KEGG:ath:AT1G14850 OMA:AIVNRNI ArrayExpress:F4HXV6 Uniprot:F4HXV6
Length = 1464
Score = 130 (50.8 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 31/107 (28%), Positives = 55/107 (51%)
Query: 4 VFMGGTDGNLYEIKYQRDASWFSASCSKVCLTS---SSLT-YILPTFINALITQEDSLAQ 59
+FM G DG++YE+ Y + W + C KVCLT+ S ++ +++P D + +
Sbjct: 201 IFMAGRDGHIYELLYTTGSGW-NKRCRKVCLTAGVGSMISRWVVPNVFK--FGAVDPVVE 257
Query: 60 ICIDNSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQAL 106
+ +DN R +LY R+E + Y G+G V+ ++ Q+ L
Sbjct: 258 MVVDNERQILYARTEEMKLQAYVSGPNGEGPLKKVAEERNLLNQKDL 304
>DICTYBASE|DDB_G0291163 [details] [associations]
symbol:nup155 "nucleoporin 155" species:44689
"Dictyostelium discoideum" [GO:0017056 "structural constituent of
nuclear pore" evidence=IEA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR004870 dictyBase:DDB_G0291163 SUPFAM:SSF50978
GO:GO:0005643 GO:GO:0006913 GenomeReviews:CM000154_GR
EMBL:AAFI02000175 GO:GO:0017056 eggNOG:COG5308 KO:K14312
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 OMA:ENGYEET RefSeq:XP_635370.1
EnsemblProtists:DDB0235243 GeneID:8628018 KEGG:ddi:DDB_G0291163
InParanoid:Q54F20 ProtClustDB:CLSZ2735604 Uniprot:Q54F20
Length = 1575
Score = 129 (50.5 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 4 VFMGGTDGNLYEIKYQRD-ASWFS-ASCSKVCLTSSSLTYILPTFINALITQEDSLAQIC 61
+F+ G DGN+YEI+Y +D WFS K+ LT + +FIN ++++ + Q+
Sbjct: 341 IFLSGQDGNIYEIEYSKDNLFWFSNEKIKKINLTQTFFN----SFIN--LSKKKEIIQLI 394
Query: 62 IDNSRNVLYTRSELGLISVYDLYERGQGFRSLVSL 96
D R +LY+ S+ I+VY L + G F L ++
Sbjct: 395 YDEDRYLLYSLSKDSTINVYSLGKIGDKFEHLKTI 429
>SGD|S000000175 [details] [associations]
symbol:NUP170 "Subunit of the inner ring of the nuclear pore
complex (NPC)" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA;ISM] [GO:0007059 "chromosome
segregation" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IEA;IDA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA;IC]
[GO:0017056 "structural constituent of nuclear pore"
evidence=IEA;IGI;IMP] [GO:0036228 "protein targeting to nuclear
inner membrane" evidence=IMP] [GO:0007094 "mitotic spindle assembly
checkpoint" evidence=IGI;IMP;IPI] [GO:0051292 "nuclear pore complex
assembly" evidence=IGI] [GO:0044611 "nuclear pore inner ring"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR004870 SGD:S000000175
GO:GO:0007059 GO:GO:0007094 GO:GO:0031965 GO:GO:0006913
EMBL:BK006936 EMBL:X79489 GO:GO:0051028 GO:GO:0051292
TCDB:9.A.14.1.1 GO:GO:0036228 GO:GO:0017056 eggNOG:COG5308
KO:K14312 InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 GeneTree:ENSGT00390000016532
HOGENOM:HOG000246581 OrthoDB:EOG41ZJJZ GO:GO:0044611 EMBL:Z35840
PIR:S45429 RefSeq:NP_009474.1 PDB:3I5P PDB:3I5Q PDBsum:3I5P
PDBsum:3I5Q ProteinModelPortal:P38181 SMR:P38181 DIP:DIP-2450N
IntAct:P38181 MINT:MINT-2788627 STRING:P38181 PaxDb:P38181
PeptideAtlas:P38181 EnsemblFungi:YBL079W GeneID:852199
KEGG:sce:YBL079W CYGD:YBL079w OMA:ENGYEET EvolutionaryTrace:P38181
NextBio:970691 Genevestigator:P38181 GermOnline:YBL079W
Uniprot:P38181
Length = 1502
Score = 120 (47.3 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 3 VVFMGGTDG-NLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALITQEDSLAQIC 61
+ F G G N++E+ Y WF++ CSKVCLT S+L +LPT + + I D + +
Sbjct: 282 IFFAGQASGLNIWELHYSGSDDWFNSKCSKVCLTKSALLSLLPTNMLSQIPGVDFIQALF 341
Query: 62 IDNS 65
DNS
Sbjct: 342 EDNS 345
Score = 34 (17.0 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 8/35 (22%), Positives = 20/35 (57%)
Query: 64 NSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSE 98
+S N ++ + LI ++ Y+ + FR ++S ++
Sbjct: 1438 DSDNSVFNKEMTWLI--HEWYKSDRKFRDIISYND 1470
>SGD|S000000907 [details] [associations]
symbol:NUP157 "Subunit of the inner ring of the nuclear pore
complex (NPC)" species:4932 "Saccharomyces cerevisiae" [GO:0051028
"mRNA transport" evidence=IEA] [GO:0000972 "transcription-dependent
tethering of RNA polymerase II gene DNA at nuclear periphery"
evidence=IMP] [GO:0016021 "integral to membrane" evidence=ISM]
[GO:0005643 "nuclear pore" evidence=IEA;IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA;IC] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0051292 "nuclear pore complex assembly" evidence=IGI]
[GO:0044611 "nuclear pore inner ring" evidence=IDA] [GO:0006810
"transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore"
evidence=IEA;IGI] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IGI;IMP;IPI] [GO:0000973 "posttranscriptional tethering of
RNA polymerase II gene DNA at nuclear periphery" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR004870
SGD:S000000907 GO:GO:0007094 GO:GO:0015031 GO:GO:0031965
GO:GO:0006913 EMBL:BK006939 EMBL:U18839 GO:GO:0051028 GO:GO:0051292
TCDB:9.A.14.1.1 GO:GO:0000973 GO:GO:0017056 eggNOG:COG5308
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 GeneTree:ENSGT00390000016532 PIR:S50608
RefSeq:NP_011031.1 ProteinModelPortal:P40064 SMR:P40064
DIP:DIP-846N IntAct:P40064 MINT:MINT-385200 STRING:P40064
PaxDb:P40064 PeptideAtlas:P40064 DNASU:856842 EnsemblFungi:YER105C
GeneID:856842 KEGG:sce:YER105C CYGD:YER105c HOGENOM:HOG000246581
OrthoDB:EOG41ZJJZ NextBio:983159 Genevestigator:P40064
GermOnline:YER105C GO:GO:0044611 Uniprot:P40064
Length = 1391
Score = 125 (49.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 32/101 (31%), Positives = 56/101 (55%)
Query: 3 VVFMGGTDG-NLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFI------NALI---- 51
+ F G TDG N++E++Y + F++ +K+CLT S+L +LPT + LI
Sbjct: 272 IFFTGATDGVNVWELQYNCSENLFNSKSNKICLTKSNLANLLPTKLIPSIPGGKLIQKVL 331
Query: 52 -----TQEDSLAQICIDNSRNVLYTRSELGLISVYDLYERG 87
T+E++++Q+ +D SR VL+T S ++ Y + G
Sbjct: 332 EGDAGTEEETISQLEVDQSRGVLHTLSTKSIVRSYLITSNG 372
>WB|WBGene00003794 [details] [associations]
symbol:npp-8 species:6239 "Caenorhabditis elegans"
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0017056 "structural
constituent of nuclear pore" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR004870 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0005643 GO:GO:0006913 GO:GO:0040035
GO:GO:0006997 EMBL:FO080782 GO:GO:0017056 KO:K14312
InterPro:IPR007187 InterPro:IPR014908 PANTHER:PTHR10350
Pfam:PF03177 Pfam:PF08801 GeneTree:ENSGT00390000016532
GeneID:176966 KEGG:cel:CELE_Y41D4B.19 UCSC:Y41D4B.19b CTD:176966
NextBio:894774 RefSeq:NP_500102.3 ProteinModelPortal:Q95Y15
IntAct:Q95Y15 MINT:MINT-1126912 PRIDE:Q95Y15
EnsemblMetazoa:Y41D4B.19b WormBase:Y41D4B.19b HOGENOM:HOG000020051
InParanoid:Q95Y15 OMA:IDERIRG ArrayExpress:Q95Y15 Uniprot:Q95Y15
Length = 1090
Score = 118 (46.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 30/98 (30%), Positives = 47/98 (47%)
Query: 10 DGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALI--TQEDSLAQICIDNSRN 67
D L+E Y++ WF ++ K C + IL T I+ + ++ L QI ID SRN
Sbjct: 117 DDQLFEFVYEKQNGWFGSTNHK-CRGVNQTASILGTLISLPFFGSSKEPLDQITIDKSRN 175
Query: 68 VLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQA 105
++Y G +SV+DL G +S+ I +A
Sbjct: 176 IMYLLGRAGTVSVWDLGADGAACAKFLSVPISKIAHEA 213
>UNIPROTKB|G0ZGU4 [details] [associations]
symbol:NUP170 "Nup170p" species:285224 "Chaetomium
thermophilum var. thermophilum" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004870 GO:GO:0005643 GO:GO:0006913
GO:GO:0017056 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 EMBL:JF276286
IntAct:G0ZGU4 Uniprot:G0ZGU4
Length = 1416
Score = 118 (46.6 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 24/83 (28%), Positives = 48/83 (57%)
Query: 4 VFMGG-TDGNLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINALI--TQEDSLAQI 60
+F+GG +D +++EI YQ++ WFS+ C K+ + + ++P+ Q++ L +
Sbjct: 259 IFLGGESDTDIHEIFYQQEERWFSSRCGKINHSHPGWSAVVPSLAGLPFGSRQQEWLRGL 318
Query: 61 CIDNSRNVLYTRSELGLISVYDL 83
+D++RN+LY+ S I Y +
Sbjct: 319 YVDDTRNLLYSLSNRSTIRTYHM 341
>CGD|CAL0001635 [details] [associations]
symbol:orf19.2485 species:5476 "Candida albicans" [GO:0044611
"nuclear pore inner ring" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0017056 "structural constituent of nuclear pore"
evidence=IEA] [GO:0036228 "protein targeting to nuclear inner
membrane" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IEA] [GO:0051292 "nuclear pore complex assembly"
evidence=IEA] InterPro:IPR004870 CGD:CAL0001635 GO:GO:0005643
GO:GO:0006913 EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0017056
eggNOG:COG5308 KO:K14312 InterPro:IPR007187 InterPro:IPR014908
PANTHER:PTHR10350 Pfam:PF03177 Pfam:PF08801 RefSeq:XP_718506.1
RefSeq:XP_718589.1 STRING:Q5A9Z9 GeneID:3639767 GeneID:3639900
KEGG:cal:CaO19.10021 KEGG:cal:CaO19.2485 Uniprot:Q5A9Z9
Length = 1426
Score = 116 (45.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/118 (25%), Positives = 58/118 (49%)
Query: 3 VVFMGGTDG-NLYEIKYQRDASWFSASCSKVCLTSSSLTYILPTFINAL-------ITQE 54
+ F G +DG N++ + Y +S+ C KVCLT + ++P ++ T E
Sbjct: 275 IYFSGESDGINIWRLDYSNKSSFIKNKCDKVCLTKGGFSSVIPNKLSGFGFSSGPSSTTE 334
Query: 55 -------DSLAQICIDNSRNVLYTRSELGLISVYDLYERGQGFRSLVSLSEEMIVQQA 105
+S+ Q+ +D+ R++LY+ S +I VY L+ + + +L+ +I + A
Sbjct: 335 NSSSSIPESIVQLEVDSDRDILYSLSNKSVIRVYKLHPKQEHLTEGSTLTPSVIFKSA 392
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.136 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 115 115 0.00091 102 3 11 22 0.42 30
29 0.45 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 571 (61 KB)
Total size of DFA: 118 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.13u 0.13s 12.26t Elapsed: 00:00:01
Total cpu time: 12.13u 0.13s 12.26t Elapsed: 00:00:01
Start: Thu Aug 15 16:15:57 2013 End: Thu Aug 15 16:15:58 2013