Query psy7674
Match_columns 164
No_of_seqs 267 out of 1715
Neff 9.0
Searched_HMMs 29240
Date Sat Aug 17 00:31:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7674.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7674hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x8g_A Thioredoxin glutathione 99.8 1.1E-20 3.8E-25 158.5 11.5 162 2-163 34-305 (598)
2 4b1b_A TRXR, thioredoxin reduc 99.7 9E-17 3.1E-21 133.6 9.1 90 74-163 146-242 (542)
3 3qfa_A Thioredoxin reductase 1 99.5 1.1E-14 3.7E-19 120.4 8.1 89 75-163 137-229 (519)
4 2wpf_A Trypanothione reductase 99.5 1.6E-14 5.5E-19 118.8 8.7 90 74-163 113-210 (495)
5 1ges_A Glutathione reductase; 99.5 1.2E-14 4.2E-19 118.0 7.9 88 74-163 99-186 (450)
6 2r9z_A Glutathione amide reduc 99.5 2E-14 6.8E-19 117.2 8.4 88 74-163 98-185 (463)
7 3dgz_A Thioredoxin reductase 2 99.5 2E-14 6.8E-19 117.9 8.0 90 74-163 110-204 (488)
8 3klj_A NAD(FAD)-dependent dehy 99.5 2.9E-14 9.9E-19 113.9 7.6 89 73-163 67-165 (385)
9 2eq6_A Pyruvate dehydrogenase 99.5 4.4E-14 1.5E-18 115.2 8.7 87 75-163 100-188 (464)
10 1fec_A Trypanothione reductase 99.5 5.9E-14 2E-18 115.2 9.1 90 74-163 109-206 (490)
11 1zk7_A HGII, reductase, mercur 99.5 6.8E-14 2.3E-18 114.0 9.1 89 75-163 101-195 (467)
12 1zmd_A Dihydrolipoyl dehydroge 99.5 1.4E-13 4.6E-18 112.4 10.1 89 75-163 104-197 (474)
13 1lvl_A Dihydrolipoamide dehydr 99.5 1.1E-13 3.7E-18 112.7 9.0 87 75-163 103-190 (458)
14 3dgh_A TRXR-1, thioredoxin red 99.5 8.4E-14 2.9E-18 113.9 8.4 88 75-163 115-206 (483)
15 2qae_A Lipoamide, dihydrolipoy 99.5 1.7E-13 6E-18 111.6 9.5 89 75-163 100-193 (468)
16 2hqm_A GR, grase, glutathione 99.5 1.1E-13 3.8E-18 113.2 8.3 89 75-163 112-204 (479)
17 1onf_A GR, grase, glutathione 99.5 3.8E-14 1.3E-18 116.6 5.4 89 74-163 95-195 (500)
18 3l8k_A Dihydrolipoyl dehydroge 99.5 1.2E-13 4E-18 112.7 8.1 88 74-163 95-191 (466)
19 1ebd_A E3BD, dihydrolipoamide 99.4 2.3E-13 8E-18 110.5 8.9 90 74-163 97-189 (455)
20 2yqu_A 2-oxoglutarate dehydrog 99.4 2.3E-13 7.8E-18 110.5 8.2 90 74-163 95-186 (455)
21 2a8x_A Dihydrolipoyl dehydroge 99.4 4.5E-13 1.5E-17 109.0 9.4 90 74-163 97-190 (464)
22 1dxl_A Dihydrolipoamide dehydr 99.4 3.2E-13 1.1E-17 109.9 8.0 89 75-163 103-196 (470)
23 3dk9_A Grase, GR, glutathione 99.4 3.6E-13 1.2E-17 110.0 7.5 88 74-163 114-206 (478)
24 1ojt_A Surface protein; redox- 99.4 1.1E-12 3.8E-17 107.3 9.9 90 74-163 101-204 (482)
25 4dna_A Probable glutathione re 99.4 8E-13 2.7E-17 107.6 8.9 88 74-163 99-189 (463)
26 1xdi_A RV3303C-LPDA; reductase 99.4 1.6E-12 5.5E-17 106.8 9.2 90 74-163 101-201 (499)
27 4eqs_A Coenzyme A disulfide re 99.4 1.4E-12 4.8E-17 105.7 8.5 88 75-163 64-166 (437)
28 1mo9_A ORF3; nucleotide bindin 99.4 1.6E-12 5.4E-17 107.5 8.5 83 79-163 146-233 (523)
29 3lad_A Dihydrolipoamide dehydr 99.4 1.9E-12 6.5E-17 105.6 8.8 90 74-163 105-199 (476)
30 1xhc_A NADH oxidase /nitrite r 99.4 1.7E-13 5.7E-18 108.7 2.4 88 74-163 66-162 (367)
31 4a5l_A Thioredoxin reductase; 99.3 5.2E-12 1.8E-16 97.0 10.2 90 74-164 72-172 (314)
32 1hyu_A AHPF, alkyl hydroperoxi 99.3 9.6E-12 3.3E-16 102.8 12.4 89 73-163 272-374 (521)
33 3ic9_A Dihydrolipoamide dehydr 99.3 8.2E-13 2.8E-17 108.5 5.6 80 82-163 111-193 (492)
34 3o0h_A Glutathione reductase; 99.3 3.1E-12 1.1E-16 104.7 8.7 90 74-163 120-210 (484)
35 2gqw_A Ferredoxin reductase; f 99.3 4.7E-12 1.6E-16 101.6 8.2 85 77-163 68-164 (408)
36 4gcm_A TRXR, thioredoxin reduc 99.3 6E-12 2E-16 97.0 8.3 88 75-164 69-165 (312)
37 3ef6_A Toluene 1,2-dioxygenase 99.3 1.3E-11 4.4E-16 99.0 10.6 86 76-163 65-162 (410)
38 3oc4_A Oxidoreductase, pyridin 99.3 1.3E-11 4.5E-16 100.1 9.9 90 74-163 64-166 (452)
39 3urh_A Dihydrolipoyl dehydroge 99.3 1.3E-11 4.3E-16 101.2 9.8 88 74-163 121-217 (491)
40 1v59_A Dihydrolipoamide dehydr 99.3 1E-11 3.5E-16 101.3 8.0 90 74-163 102-202 (478)
41 1q1r_A Putidaredoxin reductase 99.3 7.6E-12 2.6E-16 101.1 6.7 87 75-163 67-168 (431)
42 2v3a_A Rubredoxin reductase; a 99.2 3.4E-12 1.2E-16 101.5 4.4 88 74-163 66-164 (384)
43 3lxd_A FAD-dependent pyridine 99.2 1.9E-11 6.7E-16 98.0 8.8 88 74-163 71-171 (415)
44 2bc0_A NADH oxidase; flavoprot 99.2 1.7E-11 5.7E-16 100.6 7.7 90 74-163 98-213 (490)
45 3fg2_P Putative rubredoxin red 99.2 3.1E-11 1E-15 96.6 8.9 88 74-163 63-161 (404)
46 1nhp_A NADH peroxidase; oxidor 99.2 1.7E-11 5.8E-16 99.3 7.0 90 74-163 62-168 (447)
47 2cdu_A NADPH oxidase; flavoenz 99.2 1.8E-11 6.3E-16 99.2 6.8 90 74-163 64-168 (452)
48 4g6h_A Rotenone-insensitive NA 99.2 5E-12 1.7E-16 104.2 2.6 84 80-163 108-236 (502)
49 1fl2_A Alkyl hydroperoxide red 99.1 8.9E-11 3E-15 90.0 7.8 89 73-163 61-163 (310)
50 3kd9_A Coenzyme A disulfide re 99.1 6E-11 2.1E-15 96.1 6.7 85 79-163 70-167 (449)
51 3fbs_A Oxidoreductase; structu 99.1 9.9E-11 3.4E-15 88.8 7.5 89 74-164 62-161 (297)
52 3cgb_A Pyridine nucleotide-dis 99.1 6.5E-11 2.2E-15 96.8 6.8 89 75-163 99-205 (480)
53 2q7v_A Thioredoxin reductase; 99.1 1.7E-10 6E-15 89.1 8.8 90 73-164 70-172 (325)
54 3ntd_A FAD-dependent pyridine 99.1 1.1E-10 3.7E-15 97.0 7.0 87 77-163 67-170 (565)
55 2a87_A TRXR, TR, thioredoxin r 99.1 2.7E-10 9.4E-15 88.5 8.1 90 73-164 76-175 (335)
56 1vdc_A NTR, NADPH dependent th 99.1 3E-10 1E-14 87.9 8.0 90 73-164 75-179 (333)
57 2q0l_A TRXR, thioredoxin reduc 99.1 2.3E-10 7.9E-15 87.7 6.9 89 73-163 64-162 (311)
58 1m6i_A Programmed cell death p 99.1 2.1E-11 7.2E-16 100.1 0.8 82 80-163 102-199 (493)
59 1cjc_A Protein (adrenodoxin re 99.0 7.4E-11 2.5E-15 96.2 3.1 86 73-163 64-164 (460)
60 3gwf_A Cyclohexanone monooxyge 99.0 1.3E-09 4.5E-14 90.5 10.2 89 74-164 93-198 (540)
61 3r9u_A Thioredoxin reductase; 99.0 7.3E-10 2.5E-14 84.7 8.0 90 73-163 67-166 (315)
62 4fk1_A Putative thioredoxin re 99.0 7.9E-10 2.7E-14 84.9 7.9 85 77-163 69-166 (304)
63 3itj_A Thioredoxin reductase 1 99.0 7.5E-10 2.6E-14 85.4 7.8 92 73-164 89-193 (338)
64 3f8d_A Thioredoxin reductase ( 99.0 1.2E-09 4.1E-14 83.7 8.9 89 73-163 75-173 (323)
65 1trb_A Thioredoxin reductase; 99.0 5.5E-10 1.9E-14 85.9 6.9 90 73-164 67-165 (320)
66 3ics_A Coenzyme A-disulfide re 99.0 5.8E-10 2E-14 93.2 7.1 90 74-163 99-206 (588)
67 3cty_A Thioredoxin reductase; 99.0 1.2E-09 4.2E-14 84.1 7.9 89 74-164 78-175 (319)
68 3uox_A Otemo; baeyer-villiger 99.0 1.8E-09 6E-14 89.9 9.1 89 74-164 93-205 (545)
69 3iwa_A FAD-dependent pyridine 99.0 8E-10 2.7E-14 90.0 6.6 84 80-163 78-178 (472)
70 2xve_A Flavin-containing monoo 99.0 1.7E-09 5.7E-14 88.2 8.5 90 74-163 107-216 (464)
71 4a9w_A Monooxygenase; baeyer-v 99.0 2.2E-09 7.4E-14 83.2 8.5 90 73-164 81-183 (357)
72 1lqt_A FPRA; NADP+ derivative, 99.0 3E-10 1E-14 92.6 3.7 86 73-163 66-166 (456)
73 4ap3_A Steroid monooxygenase; 98.9 2.8E-09 9.4E-14 88.7 8.3 88 74-163 105-210 (549)
74 1ps9_A 2,4-dienoyl-COA reducta 98.9 7.6E-10 2.6E-14 94.0 4.8 80 74-164 431-514 (671)
75 2gv8_A Monooxygenase; FMO, FAD 98.9 3.4E-09 1.2E-13 85.7 8.0 90 75-164 122-232 (447)
76 3d1c_A Flavin-containing putat 98.9 4.9E-09 1.7E-13 82.0 8.5 86 74-163 94-185 (369)
77 3hyw_A Sulfide-quinone reducta 98.9 1.6E-10 5.4E-15 93.3 -1.3 65 73-140 61-132 (430)
78 3s5w_A L-ornithine 5-monooxyge 98.8 3.4E-09 1.2E-13 85.8 5.8 87 77-163 136-246 (463)
79 3sx6_A Sulfide-quinone reducta 98.8 1.6E-09 5.4E-14 87.5 2.5 88 73-162 64-173 (437)
80 3lzw_A Ferredoxin--NADP reduct 98.8 2.3E-08 7.9E-13 76.8 8.7 88 73-164 72-174 (332)
81 2wul_A Glutaredoxin related pr 98.8 2.4E-09 8.2E-14 71.8 2.4 70 3-84 42-112 (118)
82 2zbw_A Thioredoxin reductase; 98.7 4.7E-08 1.6E-12 75.5 9.0 88 73-164 70-172 (335)
83 2vdc_G Glutamate synthase [NAD 98.7 4.4E-09 1.5E-13 85.7 1.6 107 52-163 145-283 (456)
84 3l4n_A Monothiol glutaredoxin- 98.6 1E-08 3.5E-13 69.7 2.4 52 3-54 31-85 (127)
85 3ab1_A Ferredoxin--NADP reduct 98.6 1.3E-07 4.3E-12 74.0 8.7 88 73-164 79-183 (360)
86 3h8q_A Thioredoxin reductase 3 98.6 2E-08 7E-13 66.7 3.4 53 2-54 33-85 (114)
87 2gag_A Heterotetrameric sarcos 98.6 3.1E-08 1.1E-12 87.3 5.5 88 76-163 189-303 (965)
88 1gte_A Dihydropyrimidine dehyd 98.6 8.6E-09 2.9E-13 91.4 0.7 86 75-163 245-351 (1025)
89 3h8l_A NADH oxidase; membrane 98.5 5.3E-08 1.8E-12 77.7 4.5 82 72-153 60-154 (409)
90 1w4x_A Phenylacetone monooxyge 98.5 5.8E-07 2E-11 74.5 8.8 59 105-163 139-205 (542)
91 3zyw_A Glutaredoxin-3; metal b 98.4 1.1E-07 3.7E-12 63.0 3.3 50 2-54 37-86 (111)
92 3ipz_A Monothiol glutaredoxin- 98.4 1.1E-07 3.8E-12 62.6 3.2 50 2-54 39-88 (109)
93 3h28_A Sulfide-quinone reducta 98.4 2.9E-08 1E-12 79.8 0.2 87 74-162 62-166 (430)
94 1u6t_A SH3 domain-binding glut 98.4 1E-07 3.4E-12 64.0 2.7 47 2-51 22-76 (121)
95 3ctg_A Glutaredoxin-2; reduced 98.4 2.3E-07 7.9E-12 63.0 4.4 51 3-53 55-108 (129)
96 2wem_A Glutaredoxin-related pr 98.4 1.6E-07 5.4E-12 62.9 3.3 50 2-54 41-91 (118)
97 2x8g_A Thioredoxin glutathione 98.4 9.8E-09 3.3E-13 86.0 -3.7 95 52-163 17-126 (598)
98 1y56_A Hypothetical protein PH 98.4 4.5E-07 1.5E-11 74.3 6.1 79 80-158 172-264 (493)
99 3gx8_A Monothiol glutaredoxin- 98.4 1.7E-07 5.9E-12 63.0 2.6 72 2-85 37-111 (121)
100 3c1r_A Glutaredoxin-1; oxidize 98.3 5.7E-07 2E-11 60.0 4.4 50 3-52 43-95 (118)
101 1o94_A Tmadh, trimethylamine d 98.3 2.1E-07 7.2E-12 79.8 2.7 59 105-163 476-549 (729)
102 2wci_A Glutaredoxin-4; redox-a 98.3 4.9E-07 1.7E-11 61.9 4.0 50 2-54 56-105 (135)
103 3rhb_A ATGRXC5, glutaredoxin-C 98.3 3.4E-07 1.1E-11 60.4 2.8 53 2-54 35-88 (113)
104 1aba_A Glutaredoxin; electron 98.3 3.2E-07 1.1E-11 57.7 2.6 51 2-52 20-78 (87)
105 1t1v_A SH3BGRL3, SH3 domain-bi 98.3 4.4E-07 1.5E-11 57.9 3.2 48 2-52 24-73 (93)
106 3k30_A Histamine dehydrogenase 98.3 1.5E-07 5E-12 80.2 1.1 82 74-163 449-544 (690)
107 4b63_A L-ornithine N5 monooxyg 98.2 4.3E-06 1.5E-10 68.7 9.2 62 102-163 196-265 (501)
108 2lqo_A Putative glutaredoxin R 98.2 5.5E-08 1.9E-12 62.4 -2.4 28 53-85 4-31 (92)
109 3vrd_B FCCB subunit, flavocyto 98.2 5.3E-07 1.8E-11 71.5 2.5 51 76-128 63-116 (401)
110 1wik_A Thioredoxin-like protei 98.2 6.9E-07 2.3E-11 58.7 2.3 49 2-53 36-84 (109)
111 3qmx_A Glutaredoxin A, glutare 98.2 6.7E-07 2.3E-11 57.9 2.2 49 2-53 32-81 (99)
112 2ct6_A SH3 domain-binding glut 98.1 1.1E-06 3.6E-11 58.1 2.9 48 2-52 30-85 (111)
113 2lqo_A Putative glutaredoxin R 98.1 1.1E-06 3.8E-11 56.2 2.5 44 2-48 20-65 (92)
114 2hze_A Glutaredoxin-1; thiored 98.0 3.5E-06 1.2E-10 55.6 3.9 50 2-51 35-87 (114)
115 2yan_A Glutaredoxin-3; oxidore 98.0 1.6E-06 5.6E-11 56.4 2.0 48 2-52 38-85 (105)
116 1kte_A Thioltransferase; redox 98.0 3.5E-06 1.2E-10 54.4 2.7 51 2-52 28-81 (105)
117 3zyw_A Glutaredoxin-3; metal b 98.0 1.3E-07 4.4E-12 62.6 -4.2 74 50-142 13-93 (111)
118 3qmx_A Glutaredoxin A, glutare 97.9 2.6E-07 9E-12 59.8 -3.3 72 52-141 15-88 (99)
119 2jad_A Yellow fluorescent prot 97.9 1.3E-05 4.3E-10 63.2 5.2 51 4-54 280-333 (362)
120 3l4n_A Monothiol glutaredoxin- 97.9 7.5E-08 2.6E-12 65.3 -6.6 75 51-142 12-92 (127)
121 2ht9_A Glutaredoxin-2; thiored 97.8 7E-06 2.4E-10 56.8 2.2 75 2-85 65-139 (146)
122 2cq9_A GLRX2 protein, glutared 97.8 7.1E-06 2.4E-10 55.5 2.0 50 2-51 43-92 (130)
123 3msz_A Glutaredoxin 1; alpha-b 97.8 6.1E-06 2.1E-10 51.4 1.3 50 2-52 20-74 (89)
124 3gx8_A Monothiol glutaredoxin- 97.7 8.7E-07 3E-11 59.5 -3.3 73 50-141 13-95 (121)
125 2wul_A Glutaredoxin related pr 97.7 7.9E-07 2.7E-11 59.4 -3.7 74 50-142 17-98 (118)
126 3ipz_A Monothiol glutaredoxin- 97.7 8.3E-07 2.8E-11 58.4 -3.9 73 50-141 15-94 (109)
127 2wem_A Glutaredoxin-related pr 97.7 1.3E-06 4.3E-11 58.5 -3.4 73 50-141 17-97 (118)
128 1aba_A Glutaredoxin; electron 97.7 2.2E-06 7.5E-11 53.8 -2.2 71 55-140 2-85 (87)
129 1t1v_A SH3BGRL3, SH3 domain-bi 97.6 1.8E-06 6.3E-11 54.9 -2.9 71 54-142 3-82 (93)
130 1wik_A Thioredoxin-like protei 97.6 4E-06 1.4E-10 54.9 -2.0 72 50-140 12-90 (109)
131 3nzn_A Glutaredoxin; structura 97.5 2.7E-05 9.1E-10 50.3 1.8 51 2-52 38-91 (103)
132 2ct6_A SH3 domain-binding glut 97.5 5.8E-06 2E-10 54.5 -1.9 69 54-141 9-93 (111)
133 2gqf_A Hypothetical protein HI 97.5 0.00012 4E-09 58.5 5.2 89 73-163 114-251 (401)
134 3h8q_A Thioredoxin reductase 3 97.4 4.8E-05 1.6E-09 50.1 1.4 73 51-141 15-91 (114)
135 2khp_A Glutaredoxin; thioredox 97.4 0.00011 3.8E-09 46.0 3.0 47 2-51 22-68 (92)
136 1fov_A Glutaredoxin 3, GRX3; a 97.4 7.8E-05 2.7E-09 45.5 2.2 47 2-51 17-63 (82)
137 1u6t_A SH3 domain-binding glut 97.4 5.9E-06 2E-10 55.4 -3.3 71 54-141 1-85 (121)
138 2wci_A Glutaredoxin-4; redox-a 97.4 4.9E-06 1.7E-10 56.9 -3.8 70 52-140 34-110 (135)
139 3rhb_A ATGRXC5, glutaredoxin-C 97.3 6.6E-05 2.2E-09 49.1 1.4 72 51-140 17-93 (113)
140 1hyu_A AHPF, alkyl hydroperoxi 97.2 6.3E-05 2.2E-09 62.0 0.6 20 144-163 212-231 (521)
141 3ic4_A Glutaredoxin (GRX-1); s 97.1 0.00019 6.4E-09 44.9 2.0 50 2-51 28-79 (92)
142 3nzn_A Glutaredoxin; structura 97.0 0.0002 6.8E-09 46.1 1.7 29 52-85 21-49 (103)
143 2bry_A NEDD9 interacting prote 97.0 1.5E-05 5E-10 65.4 -5.3 56 108-163 37-111 (497)
144 2klx_A Glutaredoxin; thioredox 97.0 0.00024 8.1E-09 44.2 1.5 46 2-52 22-68 (89)
145 3msz_A Glutaredoxin 1; alpha-b 96.9 0.00029 1E-08 43.5 1.2 27 54-85 5-31 (89)
146 2yan_A Glutaredoxin-3; oxidore 96.8 0.00044 1.5E-08 44.6 1.7 71 52-141 16-93 (105)
147 3c1r_A Glutaredoxin-1; oxidize 96.8 0.0005 1.7E-08 45.5 1.9 71 53-140 25-102 (118)
148 1kte_A Thioltransferase; redox 96.8 0.00056 1.9E-08 43.7 2.0 30 50-84 9-38 (105)
149 3ctg_A Glutaredoxin-2; reduced 96.7 0.00047 1.6E-08 46.4 1.4 73 52-141 36-115 (129)
150 2hze_A Glutaredoxin-1; thiored 96.7 0.00067 2.3E-08 44.4 2.1 30 50-84 16-45 (114)
151 2klx_A Glutaredoxin; thioredox 96.6 0.00087 3E-08 41.6 2.1 27 54-85 7-33 (89)
152 1nm3_A Protein HI0572; hybrid, 96.6 0.00079 2.7E-08 49.6 2.1 47 2-52 186-232 (241)
153 3ic4_A Glutaredoxin (GRX-1); s 96.6 0.00048 1.6E-08 43.0 0.7 27 54-85 13-39 (92)
154 1ego_A Glutaredoxin; electron 96.5 0.0012 4E-08 40.3 2.1 27 54-85 2-33 (85)
155 2k8s_A Thioredoxin; dimer, str 96.5 0.00057 2E-08 41.6 0.6 32 53-85 2-33 (80)
156 1h75_A Glutaredoxin-like prote 96.5 0.00099 3.4E-08 40.4 1.7 27 54-85 2-28 (81)
157 2e7p_A Glutaredoxin; thioredox 96.4 0.0017 5.7E-08 42.0 2.7 49 3-51 37-85 (116)
158 1h75_A Glutaredoxin-like prote 96.4 0.0023 7.7E-08 38.7 3.1 46 2-51 17-62 (81)
159 1r7h_A NRDH-redoxin; thioredox 96.4 0.0022 7.4E-08 38.0 2.8 46 2-51 17-62 (75)
160 2cq9_A GLRX2 protein, glutared 96.4 0.0013 4.6E-08 44.1 1.9 28 53-85 27-54 (130)
161 1r7h_A NRDH-redoxin; thioredox 96.4 0.0013 4.6E-08 39.0 1.7 27 54-85 2-28 (75)
162 1fov_A Glutaredoxin 3, GRX3; a 96.3 0.0013 4.5E-08 39.8 1.6 27 54-85 2-28 (82)
163 2khp_A Glutaredoxin; thioredox 96.3 0.0016 5.5E-08 40.5 1.8 27 54-85 7-33 (92)
164 1rw1_A Conserved hypothetical 96.3 0.0014 4.9E-08 43.0 1.6 26 55-85 2-27 (114)
165 1ttz_A Conserved hypothetical 96.2 0.0014 4.7E-08 41.1 1.3 27 54-85 2-28 (87)
166 2ht9_A Glutaredoxin-2; thiored 96.2 0.0013 4.6E-08 45.1 1.1 29 52-85 48-76 (146)
167 1nm3_A Protein HI0572; hybrid, 96.1 0.006 2E-07 44.8 4.3 84 25-139 153-238 (241)
168 2fgx_A Putative thioredoxin; N 96.1 0.0024 8.1E-08 41.7 1.7 27 54-85 31-61 (107)
169 1ego_A Glutaredoxin; electron 95.9 0.00072 2.5E-08 41.3 -1.3 41 9-52 29-71 (85)
170 3l78_A Regulatory protein SPX; 95.8 0.0029 1E-07 41.9 1.5 26 55-85 2-27 (120)
171 4eqs_A Coenzyme A disulfide re 95.8 0.025 8.7E-07 45.3 7.3 80 42-123 150-243 (437)
172 2jad_A Yellow fluorescent prot 95.8 0.0018 6E-08 51.1 0.4 79 50-142 258-340 (362)
173 2k8s_A Thioredoxin; dimer, str 95.7 0.0063 2.2E-07 36.8 2.6 41 4-48 24-64 (80)
174 2kok_A Arsenate reductase; bru 95.6 0.0034 1.2E-07 41.5 1.3 27 54-85 6-32 (120)
175 1wjk_A C330018D20RIK protein; 95.6 0.0037 1.3E-07 39.8 1.2 29 52-85 16-46 (100)
176 2e7p_A Glutaredoxin; thioredox 95.5 0.0035 1.2E-07 40.5 0.9 27 54-85 21-47 (116)
177 3ces_A MNMG, tRNA uridine 5-ca 95.5 0.015 5.1E-07 49.3 4.8 53 74-128 130-189 (651)
178 1z3e_A Regulatory protein SPX; 95.5 0.0049 1.7E-07 41.5 1.5 27 54-85 2-28 (132)
179 3fz4_A Putative arsenate reduc 94.9 0.0079 2.7E-07 39.9 1.3 27 54-85 4-30 (120)
180 3gkx_A Putative ARSC family re 94.9 0.0069 2.3E-07 40.2 0.9 27 54-85 5-31 (120)
181 1s3c_A Arsenate reductase; ARS 94.9 0.007 2.4E-07 41.3 0.9 27 54-85 3-29 (141)
182 3rdw_A Putative arsenate reduc 94.8 0.0074 2.5E-07 40.1 0.7 26 55-85 7-32 (121)
183 3fpz_A Thiazole biosynthetic e 94.6 0.007 2.4E-07 46.4 0.4 122 28-163 54-202 (326)
184 2yqu_A 2-oxoglutarate dehydrog 94.6 0.075 2.6E-06 42.6 6.5 71 52-124 190-268 (455)
185 1nhp_A NADH peroxidase; oxidor 94.3 0.2 6.8E-06 40.0 8.3 84 40-125 150-251 (447)
186 1lvl_A Dihydrolipoamide dehydr 94.2 0.071 2.4E-06 42.8 5.5 73 52-124 194-272 (458)
187 3f0i_A Arsenate reductase; str 94.1 0.012 4.3E-07 38.8 0.8 27 54-85 5-31 (119)
188 2e5v_A L-aspartate oxidase; ar 93.9 0.025 8.7E-07 45.8 2.4 50 74-125 125-181 (472)
189 1trb_A Thioredoxin reductase; 93.9 0.11 3.6E-06 39.1 5.8 74 52-125 168-252 (320)
190 3fbs_A Oxidoreductase; structu 93.8 0.1 3.6E-06 38.6 5.5 48 74-123 180-229 (297)
191 2gqw_A Ferredoxin reductase; f 93.8 0.15 5.3E-06 40.2 6.7 69 52-122 168-241 (408)
192 4b1b_A TRXR, thioredoxin reduc 93.7 0.16 5.4E-06 42.1 6.7 80 42-123 226-322 (542)
193 2bc0_A NADH oxidase; flavoprot 93.7 0.24 8.1E-06 40.1 7.7 82 40-123 195-294 (490)
194 2ywl_A Thioredoxin reductase r 93.5 0.11 3.6E-06 35.9 4.7 49 72-122 60-112 (180)
195 1wjk_A C330018D20RIK protein; 93.4 0.082 2.8E-06 33.4 3.7 42 2-49 33-76 (100)
196 3hyw_A Sulfide-quinone reducta 93.2 0.16 5.4E-06 40.4 5.9 49 73-121 205-257 (430)
197 1fo5_A Thioredoxin; disulfide 93.0 0.052 1.8E-06 32.4 2.2 17 54-70 5-21 (85)
198 1ebd_A E3BD, dihydrolipoamide 93.0 0.25 8.5E-06 39.5 6.8 73 52-124 193-274 (455)
199 1nho_A Probable thioredoxin; b 92.9 0.051 1.7E-06 32.4 2.0 18 54-71 4-21 (85)
200 3ics_A Coenzyme A-disulfide re 92.9 0.19 6.6E-06 41.6 6.1 79 42-122 190-284 (588)
201 3h8l_A NADH oxidase; membrane 92.9 0.15 5.2E-06 40.0 5.2 66 54-121 203-271 (409)
202 1onf_A GR, grase, glutathione 92.7 0.32 1.1E-05 39.5 7.1 70 52-123 199-278 (500)
203 1ges_A Glutathione reductase; 92.6 0.21 7.3E-06 39.9 5.9 70 52-123 190-268 (450)
204 1zmd_A Dihydrolipoyl dehydroge 92.6 0.21 7.1E-06 40.2 5.8 73 52-124 201-286 (474)
205 2r9z_A Glutathione amide reduc 92.6 0.25 8.4E-06 39.8 6.2 70 52-123 189-267 (463)
206 1xdi_A RV3303C-LPDA; reductase 92.4 0.2 6.7E-06 40.7 5.5 73 52-124 205-283 (499)
207 2eq6_A Pyruvate dehydrogenase 92.4 0.22 7.7E-06 40.0 5.7 84 41-124 171-275 (464)
208 2a8x_A Dihydrolipoyl dehydroge 92.3 0.28 9.5E-06 39.3 6.2 73 52-124 194-275 (464)
209 2axo_A Hypothetical protein AT 92.3 0.067 2.3E-06 40.4 2.3 24 53-81 44-67 (270)
210 1mo9_A ORF3; nucleotide bindin 92.2 0.25 8.6E-06 40.4 5.9 71 52-123 237-319 (523)
211 2hqm_A GR, grase, glutathione 92.1 0.3 1E-05 39.4 6.2 81 41-122 187-287 (479)
212 2zbw_A Thioredoxin reductase; 92.1 0.31 1.1E-05 36.8 6.0 51 73-123 196-255 (335)
213 3ab1_A Ferredoxin--NADP reduct 92.1 0.56 1.9E-05 35.9 7.5 51 73-123 207-266 (360)
214 3lxd_A FAD-dependent pyridine 92.1 0.25 8.5E-06 38.9 5.6 69 52-122 175-253 (415)
215 3ef6_A Toluene 1,2-dioxygenase 92.1 0.2 6.9E-06 39.5 5.0 69 52-122 166-243 (410)
216 3lad_A Dihydrolipoamide dehydr 92.0 0.55 1.9E-05 37.7 7.6 72 52-123 203-283 (476)
217 1rp0_A ARA6, thiazole biosynth 92.0 0.046 1.6E-06 41.1 1.2 19 145-163 40-58 (284)
218 1ttz_A Conserved hypothetical 92.0 0.059 2E-06 33.4 1.5 41 2-50 17-59 (87)
219 1xhc_A NADH oxidase /nitrite r 91.9 0.19 6.6E-06 39.1 4.7 80 41-122 145-236 (367)
220 1ojt_A Surface protein; redox- 91.8 0.17 5.9E-06 40.8 4.5 71 52-122 208-288 (482)
221 3fg2_P Putative rubredoxin red 91.7 0.2 7E-06 39.3 4.7 69 52-122 165-243 (404)
222 1v59_A Dihydrolipoamide dehydr 91.7 0.44 1.5E-05 38.3 6.8 72 52-123 206-290 (478)
223 3k30_A Histamine dehydrogenase 91.5 0.4 1.4E-05 40.6 6.5 71 52-122 548-626 (690)
224 2cdu_A NADPH oxidase; flavoenz 91.5 0.38 1.3E-05 38.3 6.1 70 52-123 172-250 (452)
225 2cul_A Glucose-inhibited divis 91.4 0.22 7.6E-06 36.1 4.3 53 73-127 73-132 (232)
226 3ntd_A FAD-dependent pyridine 91.3 0.65 2.2E-05 38.0 7.4 80 41-122 153-269 (565)
227 2axo_A Hypothetical protein AT 91.3 0.021 7.2E-07 43.2 -1.4 27 25-51 98-127 (270)
228 1dxl_A Dihydrolipoamide dehydr 91.1 0.43 1.5E-05 38.2 6.1 73 52-124 200-283 (470)
229 2wpf_A Trypanothione reductase 91.0 0.59 2E-05 37.9 6.8 69 53-123 218-295 (495)
230 2qae_A Lipoamide, dihydrolipoy 90.7 0.55 1.9E-05 37.6 6.4 73 52-124 197-280 (468)
231 3gwf_A Cyclohexanone monooxyge 90.7 0.27 9.1E-06 40.6 4.6 56 65-122 326-386 (540)
232 2vdc_G Glutamate synthase [NAD 90.7 0.093 3.2E-06 42.4 1.8 21 143-163 121-141 (456)
233 1zk7_A HGII, reductase, mercur 90.6 0.48 1.7E-05 37.9 5.9 70 52-123 199-274 (467)
234 2v3a_A Rubredoxin reductase; a 90.5 0.36 1.2E-05 37.6 5.0 69 52-122 168-245 (384)
235 3urh_A Dihydrolipoyl dehydroge 90.5 0.56 1.9E-05 37.8 6.3 73 52-124 221-304 (491)
236 3h28_A Sulfide-quinone reducta 90.2 0.45 1.5E-05 37.7 5.4 50 72-121 204-257 (430)
237 1fec_A Trypanothione reductase 90.2 0.69 2.4E-05 37.4 6.6 69 53-123 214-291 (490)
238 3oc4_A Oxidoreductase, pyridin 90.2 0.77 2.7E-05 36.6 6.8 52 72-125 193-249 (452)
239 1eej_A Thiol:disulfide interch 89.8 0.14 4.8E-06 36.9 2.0 32 53-86 88-119 (216)
240 1ps9_A 2,4-dienoyl-COA reducta 89.8 0.59 2E-05 39.4 6.0 49 74-122 579-630 (671)
241 4g6h_A Rotenone-insensitive NA 89.7 0.6 2.1E-05 38.1 5.9 50 72-121 276-333 (502)
242 3dgz_A Thioredoxin reductase 2 89.4 1 3.6E-05 36.2 7.0 73 52-124 208-291 (488)
243 1a8l_A Protein disulfide oxido 89.1 0.89 3E-05 32.3 5.9 16 55-70 138-153 (226)
244 3o0h_A Glutathione reductase; 89.0 0.49 1.7E-05 38.1 4.8 50 73-124 237-292 (484)
245 2fgx_A Putative thioredoxin; N 89.0 0.074 2.5E-06 34.4 -0.1 34 9-50 57-92 (107)
246 3dwv_A Glutathione peroxidase- 88.9 0.33 1.1E-05 33.8 3.4 33 54-86 49-83 (187)
247 2l6c_A Thioredoxin; oxidoreduc 88.6 0.19 6.4E-06 31.8 1.7 17 54-70 22-38 (110)
248 1zma_A Bacterocin transport ac 88.6 0.13 4.6E-06 32.8 1.0 17 54-70 32-48 (118)
249 3kp8_A Vkorc1/thioredoxin doma 88.5 0.13 4.5E-06 32.8 0.9 17 54-70 15-31 (106)
250 3uox_A Otemo; baeyer-villiger 88.2 1.3 4.4E-05 36.5 6.9 58 62-121 331-392 (545)
251 1o94_A Tmadh, trimethylamine d 88.2 0.17 5.9E-06 43.2 1.7 20 144-163 389-408 (729)
252 4dna_A Probable glutathione re 88.1 0.66 2.3E-05 37.1 5.0 50 72-124 215-272 (463)
253 3fpz_A Thiazole biosynthetic e 88.0 0.16 5.4E-06 38.7 1.2 19 145-163 66-84 (326)
254 4ap3_A Steroid monooxygenase; 87.9 0.66 2.3E-05 38.3 4.9 58 62-121 336-397 (549)
255 3dgh_A TRXR-1, thioredoxin red 87.8 1.4 4.9E-05 35.3 6.9 72 52-123 210-292 (483)
256 2zxi_A TRNA uridine 5-carboxym 87.8 0.7 2.4E-05 39.0 5.1 54 73-128 128-188 (637)
257 3r9u_A Thioredoxin reductase; 87.8 0.52 1.8E-05 35.0 4.0 49 75-123 190-247 (315)
258 1t3b_A Thiol:disulfide interch 87.7 0.25 8.5E-06 35.5 2.1 32 53-86 88-119 (211)
259 3hcz_A Possible thiol-disulfid 87.6 0.38 1.3E-05 31.4 2.8 33 54-86 34-68 (148)
260 2v1m_A Glutathione peroxidase; 87.6 0.36 1.2E-05 32.5 2.7 33 54-86 34-68 (169)
261 1mek_A Protein disulfide isome 87.6 0.34 1.2E-05 30.5 2.4 17 54-70 27-43 (120)
262 3f8d_A Thioredoxin reductase ( 87.5 0.89 3.1E-05 33.8 5.2 47 76-122 198-253 (323)
263 3dk9_A Grase, GR, glutathione 87.5 1.2 4.2E-05 35.6 6.3 72 52-123 210-296 (478)
264 2lrn_A Thiol:disulfide interch 87.4 0.33 1.1E-05 32.3 2.5 33 54-86 32-66 (152)
265 3ic9_A Dihydrolipoamide dehydr 87.4 1.4 4.6E-05 35.7 6.5 72 52-124 197-278 (492)
266 1z6n_A Hypothetical protein PA 87.4 0.16 5.4E-06 35.4 0.8 17 54-70 57-73 (167)
267 3ewl_A Uncharacterized conserv 87.4 0.28 9.6E-06 32.1 2.0 33 54-86 30-67 (142)
268 3iwa_A FAD-dependent pyridine 87.2 0.72 2.5E-05 37.0 4.7 68 53-122 184-260 (472)
269 2gs3_A PHGPX, GPX-4, phospholi 86.9 0.41 1.4E-05 33.3 2.7 33 54-86 52-86 (185)
270 1m6i_A Programmed cell death p 86.8 1 3.5E-05 36.5 5.4 49 73-123 231-285 (493)
271 3nlc_A Uncharacterized protein 86.8 0.21 7.1E-06 41.4 1.3 20 144-163 107-126 (549)
272 3kij_A Probable glutathione pe 86.7 0.37 1.3E-05 33.2 2.4 32 55-86 42-75 (180)
273 3itj_A Thioredoxin reductase 1 86.6 1.1 3.8E-05 33.5 5.3 49 75-123 215-274 (338)
274 2p31_A CL683, glutathione pero 86.5 0.44 1.5E-05 32.9 2.7 33 54-86 52-86 (181)
275 2a87_A TRXR, TR, thioredoxin r 86.4 0.83 2.8E-05 34.6 4.5 50 76-125 199-257 (335)
276 3gl3_A Putative thiol:disulfid 86.4 0.41 1.4E-05 31.6 2.5 33 54-86 31-65 (152)
277 2lja_A Putative thiol-disulfid 86.4 0.47 1.6E-05 31.3 2.7 17 54-70 33-49 (152)
278 2f9s_A Thiol-disulfide oxidore 86.3 0.35 1.2E-05 32.0 2.1 33 54-86 29-63 (151)
279 3lzw_A Ferredoxin--NADP reduct 86.1 1.2 4.1E-05 33.2 5.2 49 76-124 197-254 (332)
280 3cp8_A TRNA uridine 5-carboxym 86.0 1 3.6E-05 38.0 5.2 52 74-127 123-181 (641)
281 2dml_A Protein disulfide-isome 86.0 0.47 1.6E-05 30.5 2.5 17 54-70 38-54 (130)
282 2vup_A Glutathione peroxidase- 86.0 0.5 1.7E-05 32.9 2.8 33 54-86 51-85 (190)
283 1q1r_A Putidaredoxin reductase 86.0 0.89 3.1E-05 36.1 4.6 69 52-122 172-252 (431)
284 1vdc_A NTR, NADPH dependent th 85.9 0.92 3.1E-05 34.1 4.5 49 76-124 203-263 (333)
285 3sx6_A Sulfide-quinone reducta 85.8 1.4 4.8E-05 34.9 5.7 50 72-121 212-270 (437)
286 3v76_A Flavoprotein; structura 85.7 2 6.8E-05 34.1 6.5 45 74-120 138-187 (417)
287 3cgb_A Pyridine nucleotide-dis 85.7 0.91 3.1E-05 36.5 4.6 70 52-123 209-285 (480)
288 3c4n_A Uncharacterized protein 85.7 0.25 8.4E-06 38.9 1.2 19 145-163 37-55 (405)
289 2p5q_A Glutathione peroxidase 85.5 0.53 1.8E-05 31.7 2.7 33 54-86 35-69 (170)
290 2q7v_A Thioredoxin reductase; 85.5 1.2 4.3E-05 33.3 5.1 45 79-123 199-252 (325)
291 3qfa_A Thioredoxin reductase 1 85.5 3.8 0.00013 33.3 8.3 83 42-124 213-319 (519)
292 2lrt_A Uncharacterized protein 85.3 0.42 1.4E-05 32.0 2.1 33 54-86 38-72 (152)
293 3dml_A Putative uncharacterize 85.2 0.24 8.2E-06 32.5 0.7 19 52-70 19-37 (116)
294 2djj_A PDI, protein disulfide- 85.1 0.38 1.3E-05 30.5 1.7 18 53-70 27-44 (121)
295 3or5_A Thiol:disulfide interch 85.0 0.38 1.3E-05 32.2 1.8 33 54-86 37-71 (165)
296 3eur_A Uncharacterized protein 85.0 0.39 1.3E-05 31.5 1.8 34 54-87 34-72 (142)
297 1x5e_A Thioredoxin domain cont 84.9 0.54 1.8E-05 30.2 2.4 17 54-70 25-41 (126)
298 3cty_A Thioredoxin reductase; 84.9 1.4 4.8E-05 32.9 5.1 50 74-123 196-255 (319)
299 3d6i_A Monothiol glutaredoxin- 84.8 0.35 1.2E-05 30.3 1.4 17 54-70 24-40 (112)
300 2voc_A Thioredoxin; electron t 84.8 0.46 1.6E-05 29.9 2.0 17 54-70 20-36 (112)
301 1gh2_A Thioredoxin-like protei 84.8 0.3 1E-05 30.4 1.1 17 54-70 24-40 (107)
302 2l5o_A Putative thioredoxin; s 84.7 0.58 2E-05 30.9 2.6 33 54-86 31-65 (153)
303 2dj0_A Thioredoxin-related tra 84.5 0.52 1.8E-05 30.9 2.2 16 55-70 30-45 (137)
304 3lor_A Thiol-disulfide isomera 84.5 0.35 1.2E-05 32.3 1.4 32 55-86 34-68 (160)
305 1w4x_A Phenylacetone monooxyge 84.5 1.8 6.2E-05 35.4 5.9 58 62-121 331-392 (542)
306 2oe3_A Thioredoxin-3; electron 84.5 0.33 1.1E-05 30.9 1.2 17 54-70 33-49 (114)
307 3raz_A Thioredoxin-related pro 84.5 0.28 9.6E-06 32.6 0.9 17 54-70 27-43 (151)
308 2pu9_C TRX-F, thioredoxin F-ty 84.5 0.31 1E-05 30.6 1.0 17 54-70 27-43 (111)
309 2f8a_A Glutathione peroxidase 84.4 0.62 2.1E-05 33.3 2.7 33 54-86 50-84 (208)
310 1nsw_A Thioredoxin, TRX; therm 84.4 0.31 1.1E-05 30.0 1.0 17 54-70 20-36 (105)
311 3dje_A Fructosyl amine: oxygen 84.4 1.9 6.6E-05 33.8 5.9 46 73-120 166-221 (438)
312 1ep7_A Thioredoxin CH1, H-type 84.3 0.31 1.1E-05 30.4 1.0 17 54-70 27-43 (112)
313 2obi_A PHGPX, GPX-4, phospholi 84.3 0.65 2.2E-05 32.0 2.7 33 54-86 50-84 (183)
314 2h30_A Thioredoxin, peptide me 84.2 0.29 9.8E-06 32.9 0.8 34 53-86 40-75 (164)
315 3die_A Thioredoxin, TRX; elect 84.1 0.32 1.1E-05 29.9 1.0 17 54-70 22-38 (106)
316 2e1m_A L-glutamate oxidase; L- 84.0 0.46 1.6E-05 37.4 2.0 21 143-163 43-63 (376)
317 3f3q_A Thioredoxin-1; His TAG, 83.9 0.33 1.1E-05 30.5 1.0 17 54-70 27-43 (109)
318 1thx_A Thioredoxin, thioredoxi 83.9 0.45 1.6E-05 29.7 1.7 18 53-70 27-44 (115)
319 2l57_A Uncharacterized protein 83.9 0.34 1.2E-05 31.2 1.1 18 53-70 28-45 (126)
320 1t00_A Thioredoxin, TRX; redox 83.9 0.34 1.2E-05 30.3 1.0 17 54-70 26-42 (112)
321 2e0q_A Thioredoxin; electron t 83.7 0.35 1.2E-05 29.5 1.0 17 54-70 19-35 (104)
322 2dj3_A Protein disulfide-isome 83.7 0.37 1.3E-05 31.2 1.2 17 54-70 28-44 (133)
323 1faa_A Thioredoxin F; electron 83.6 0.35 1.2E-05 31.0 1.0 17 54-70 40-56 (124)
324 3fkf_A Thiol-disulfide oxidore 83.6 0.48 1.6E-05 30.9 1.7 17 54-70 36-52 (148)
325 2trx_A Thioredoxin; electron t 83.6 0.35 1.2E-05 29.9 1.0 17 54-70 23-39 (108)
326 3m9j_A Thioredoxin; oxidoreduc 83.5 0.36 1.2E-05 29.7 1.0 17 54-70 23-39 (105)
327 2xc2_A Thioredoxinn; oxidoredu 83.5 0.35 1.2E-05 30.6 1.0 17 54-70 36-52 (117)
328 1y56_A Hypothetical protein PH 83.4 0.3 1E-05 39.6 0.8 20 145-164 109-128 (493)
329 3cxg_A Putative thioredoxin; m 83.3 0.41 1.4E-05 31.4 1.3 17 54-70 43-59 (133)
330 3alj_A 2-methyl-3-hydroxypyrid 83.2 2.7 9.2E-05 32.4 6.1 48 73-122 112-162 (379)
331 1fb6_A Thioredoxin M; electron 83.2 0.37 1.3E-05 29.5 1.0 17 54-70 21-37 (105)
332 1dby_A Chloroplast thioredoxin 83.2 0.37 1.3E-05 29.8 1.0 17 54-70 22-38 (107)
333 3jsk_A Cypbp37 protein; octame 83.2 0.38 1.3E-05 37.5 1.2 19 145-163 80-98 (344)
334 3cmi_A Peroxiredoxin HYR1; thi 83.2 0.77 2.6E-05 31.2 2.7 32 54-86 35-68 (171)
335 2vm1_A Thioredoxin, thioredoxi 83.2 0.37 1.3E-05 30.3 1.0 17 54-70 31-47 (118)
336 2f51_A Thioredoxin; electron t 83.1 0.38 1.3E-05 30.8 1.0 17 54-70 26-42 (118)
337 2vim_A Thioredoxin, TRX; thior 83.1 0.38 1.3E-05 29.4 1.0 17 54-70 22-38 (104)
338 1v58_A Thiol:disulfide interch 83.0 0.6 2.1E-05 34.2 2.2 31 54-85 100-130 (241)
339 1wmj_A Thioredoxin H-type; str 82.9 0.51 1.8E-05 30.3 1.6 17 54-70 39-55 (130)
340 2q0l_A TRXR, thioredoxin reduc 82.9 1.5 5.3E-05 32.5 4.5 48 76-123 186-244 (311)
341 1xfl_A Thioredoxin H1; AT3G510 82.9 0.39 1.3E-05 31.1 1.0 16 55-70 42-57 (124)
342 2gjc_A Thiazole biosynthetic e 82.9 0.4 1.4E-05 37.1 1.2 19 145-163 66-84 (326)
343 2vlu_A Thioredoxin, thioredoxi 82.8 0.39 1.3E-05 30.6 1.0 18 54-71 37-54 (122)
344 4euy_A Uncharacterized protein 82.7 0.38 1.3E-05 29.9 0.9 17 54-70 21-37 (105)
345 1fl2_A Alkyl hydroperoxide red 82.7 2.4 8.1E-05 31.4 5.5 48 75-122 186-244 (310)
346 2l5l_A Thioredoxin; structural 82.7 0.38 1.3E-05 31.5 1.0 18 53-70 40-57 (136)
347 3hxs_A Thioredoxin, TRXP; elec 82.6 0.53 1.8E-05 30.8 1.7 18 53-70 53-70 (141)
348 2hls_A Protein disulfide oxido 82.6 0.52 1.8E-05 34.5 1.7 16 55-70 142-157 (243)
349 2yzu_A Thioredoxin; redox prot 82.6 0.41 1.4E-05 29.5 1.0 17 54-70 21-37 (109)
350 2gmh_A Electron transfer flavo 82.6 0.4 1.4E-05 39.9 1.2 19 145-163 36-54 (584)
351 1x5d_A Protein disulfide-isome 82.5 0.44 1.5E-05 30.7 1.2 17 54-70 28-44 (133)
352 3tco_A Thioredoxin (TRXA-1); d 82.5 0.41 1.4E-05 29.5 1.0 17 54-70 24-40 (109)
353 2bry_A NEDD9 interacting prote 82.5 1 3.5E-05 36.5 3.6 52 74-125 172-235 (497)
354 1syr_A Thioredoxin; SGPP, stru 82.4 0.41 1.4E-05 30.1 1.0 17 54-70 29-45 (112)
355 1xwb_A Thioredoxin; dimerizati 82.4 0.42 1.4E-05 29.4 1.0 16 55-70 24-39 (106)
356 3uvt_A Thioredoxin domain-cont 82.4 0.43 1.5E-05 29.6 1.1 17 54-70 24-40 (111)
357 2i4a_A Thioredoxin; acidophIle 82.2 0.43 1.5E-05 29.4 1.0 17 54-70 23-39 (107)
358 3gnj_A Thioredoxin domain prot 82.2 0.44 1.5E-05 29.6 1.1 17 54-70 25-41 (111)
359 3qfa_C Thioredoxin; protein-pr 82.1 0.43 1.5E-05 30.4 1.0 17 54-70 34-50 (116)
360 1gte_A Dihydropyrimidine dehyd 82.0 0.45 1.5E-05 42.3 1.4 20 144-163 187-206 (1025)
361 1y0p_A Fumarate reductase flav 81.9 0.44 1.5E-05 39.3 1.2 19 145-163 127-145 (571)
362 3fmw_A Oxygenase; mithramycin, 81.8 0.44 1.5E-05 39.5 1.2 19 145-163 50-68 (570)
363 1ti3_A Thioredoxin H, PTTRXH1; 81.8 0.46 1.6E-05 29.6 1.1 16 55-70 30-45 (113)
364 2j23_A Thioredoxin; immune pro 81.7 0.62 2.1E-05 29.8 1.7 17 54-70 36-52 (121)
365 3eyt_A Uncharacterized protein 81.4 0.55 1.9E-05 31.2 1.4 15 55-69 32-46 (158)
366 3fk8_A Disulphide isomerase; A 81.3 0.39 1.3E-05 31.2 0.6 17 54-70 32-48 (133)
367 3erw_A Sporulation thiol-disul 81.3 0.47 1.6E-05 30.8 1.0 17 54-70 37-53 (145)
368 2xve_A Flavin-containing monoo 81.3 2 7E-05 34.4 4.9 32 93-126 250-282 (464)
369 2dj1_A Protein disulfide-isome 81.3 0.52 1.8E-05 30.7 1.2 17 54-70 37-53 (140)
370 3lwa_A Secreted thiol-disulfid 81.2 0.78 2.7E-05 31.5 2.2 29 55-83 63-93 (183)
371 3drn_A Peroxiredoxin, bacterio 81.2 0.66 2.2E-05 31.3 1.7 33 54-86 32-67 (161)
372 2o8v_B Thioredoxin 1; disulfid 81.1 0.55 1.9E-05 30.6 1.2 17 54-70 43-59 (128)
373 3aps_A DNAJ homolog subfamily 81.0 0.5 1.7E-05 30.1 1.0 17 54-70 24-40 (122)
374 3emx_A Thioredoxin; structural 81.0 0.46 1.6E-05 31.2 0.8 31 54-85 34-64 (135)
375 3f9u_A Putative exported cytoc 80.9 0.41 1.4E-05 32.7 0.6 16 54-69 50-65 (172)
376 3pvc_A TRNA 5-methylaminomethy 80.8 0.55 1.9E-05 39.7 1.5 20 144-163 264-283 (689)
377 1w4v_A Thioredoxin, mitochondr 80.7 0.52 1.8E-05 30.1 1.0 17 54-70 34-50 (119)
378 3ps9_A TRNA 5-methylaminomethy 80.6 0.5 1.7E-05 39.8 1.2 19 145-163 273-291 (676)
379 2fwh_A Thiol:disulfide interch 80.6 0.43 1.5E-05 31.3 0.6 17 54-70 34-50 (134)
380 3kp9_A Vkorc1/thioredoxin doma 80.5 0.23 7.8E-06 37.9 -0.9 23 48-70 194-216 (291)
381 3u5r_E Uncharacterized protein 80.5 0.81 2.8E-05 32.7 2.1 33 54-86 62-96 (218)
382 2ywi_A Hypothetical conserved 80.5 0.81 2.8E-05 31.7 2.1 33 54-86 49-83 (196)
383 3dme_A Conserved exported prot 80.3 2.5 8.5E-05 31.9 5.0 48 73-120 155-209 (369)
384 2i1u_A Thioredoxin, TRX, MPT46 80.2 0.55 1.9E-05 29.7 1.0 17 54-70 33-49 (121)
385 3ul3_B Thioredoxin, thioredoxi 80.2 0.55 1.9E-05 30.4 1.0 17 54-70 45-61 (128)
386 3ph9_A Anterior gradient prote 80.0 0.42 1.4E-05 32.6 0.4 17 54-70 47-63 (151)
387 2yj7_A LPBCA thioredoxin; oxid 81.0 0.36 1.2E-05 29.5 0.0 17 54-70 22-38 (106)
388 4fo5_A Thioredoxin-like protei 79.8 0.42 1.4E-05 31.4 0.4 16 55-70 36-51 (143)
389 2kuc_A Putative disulphide-iso 79.7 0.52 1.8E-05 30.3 0.8 17 54-70 30-46 (130)
390 1qo8_A Flavocytochrome C3 fuma 79.7 0.57 2E-05 38.6 1.2 19 145-163 122-140 (566)
391 2i3y_A Epididymal secretory gl 79.4 1.7 5.7E-05 31.3 3.5 31 54-86 59-92 (215)
392 1sen_A Thioredoxin-like protei 79.3 0.57 1.9E-05 32.0 0.9 17 54-70 49-65 (164)
393 3s9f_A Tryparedoxin; thioredox 79.1 0.88 3E-05 30.9 1.8 17 54-70 51-67 (165)
394 2x3n_A Probable FAD-dependent 79.1 3.4 0.00012 31.9 5.4 46 74-121 113-167 (399)
395 2lst_A Thioredoxin; structural 80.2 0.4 1.4E-05 30.9 0.0 17 54-70 22-38 (130)
396 1we0_A Alkyl hydroperoxide red 78.8 1.4 5E-05 30.3 2.9 33 54-86 34-69 (187)
397 3nlc_A Uncharacterized protein 78.8 2.8 9.5E-05 34.7 5.0 46 74-121 226-278 (549)
398 2i0z_A NAD(FAD)-utilizing dehy 78.6 4.3 0.00015 32.2 6.0 45 74-120 140-191 (447)
399 1r26_A Thioredoxin; redox-acti 78.6 0.72 2.5E-05 29.9 1.2 17 54-70 40-56 (125)
400 2vvm_A Monoamine oxidase N; FA 78.5 0.66 2.3E-05 37.2 1.2 19 145-163 40-58 (495)
401 1zof_A Alkyl hydroperoxide-red 78.3 1.6 5.4E-05 30.5 3.0 33 54-86 36-71 (198)
402 3kcm_A Thioredoxin family prot 78.1 0.86 2.9E-05 30.0 1.5 17 54-70 31-47 (154)
403 2wz9_A Glutaredoxin-3; protein 78.1 0.69 2.4E-05 31.0 1.0 17 54-70 35-51 (153)
404 2pwj_A Mitochondrial peroxired 78.0 0.93 3.2E-05 31.2 1.7 29 58-86 51-83 (171)
405 3c85_A Putative glutathione-re 78.0 1 3.5E-05 31.0 1.9 20 144-163 39-58 (183)
406 3d22_A TRXH4, thioredoxin H-ty 77.7 0.72 2.5E-05 30.1 1.0 17 54-70 49-65 (139)
407 1d4d_A Flavocytochrome C fumar 77.5 6 0.0002 32.6 6.7 49 73-121 260-318 (572)
408 3hdc_A Thioredoxin family prot 77.3 0.81 2.8E-05 30.6 1.2 17 54-70 44-60 (158)
409 3s5w_A L-ornithine 5-monooxyge 77.3 2.8 9.7E-05 33.1 4.6 41 81-121 329-378 (463)
410 3kh7_A Thiol:disulfide interch 77.2 1.2 4.2E-05 30.5 2.2 31 54-86 61-91 (176)
411 2aqj_A Tryptophan halogenase, 77.1 4 0.00014 33.2 5.5 47 74-122 171-224 (538)
412 2z3y_A Lysine-specific histone 76.8 0.97 3.3E-05 38.1 1.8 20 144-163 107-126 (662)
413 3h79_A Thioredoxin-like protei 76.7 0.8 2.7E-05 29.4 1.0 17 54-70 36-52 (127)
414 3nyc_A D-arginine dehydrogenas 76.6 2.7 9.3E-05 32.0 4.2 45 73-119 159-208 (381)
415 3ia1_A THIO-disulfide isomeras 76.5 1.2 4.1E-05 29.4 1.9 32 54-86 33-64 (154)
416 2bmx_A Alkyl hydroperoxidase C 76.4 1.5 5.3E-05 30.5 2.5 33 54-86 48-83 (195)
417 3gv1_A Disulfide interchange p 76.4 0.81 2.8E-05 31.0 1.0 19 52-70 15-33 (147)
418 2r37_A Glutathione peroxidase 76.1 2.1 7.3E-05 30.5 3.2 31 54-86 41-74 (207)
419 2oln_A NIKD protein; flavoprot 76.1 3.5 0.00012 31.8 4.7 44 74-119 159-207 (397)
420 3hz4_A Thioredoxin; NYSGXRC, P 76.0 0.85 2.9E-05 30.0 1.0 17 54-70 27-43 (140)
421 3gkn_A Bacterioferritin comigr 76.0 1.3 4.4E-05 29.6 2.0 32 55-86 39-73 (163)
422 4gqc_A Thiol peroxidase, perox 75.8 1.4 4.8E-05 30.0 2.1 27 60-86 43-71 (164)
423 1y0p_A Fumarate reductase flav 75.7 6.1 0.00021 32.4 6.3 48 73-120 260-317 (571)
424 2ls5_A Uncharacterized protein 77.4 0.57 2E-05 31.3 0.0 17 54-70 36-52 (159)
425 3e1t_A Halogenase; flavoprotei 75.3 6 0.0002 32.0 6.0 51 73-123 116-175 (512)
426 4at0_A 3-ketosteroid-delta4-5a 75.2 0.92 3.1E-05 36.8 1.2 18 146-163 43-60 (510)
427 1rp0_A ARA6, thiazole biosynth 75.1 7.3 0.00025 28.8 6.1 48 76-123 127-194 (284)
428 1zye_A Thioredoxin-dependent p 75.0 1.9 6.6E-05 30.8 2.8 33 54-86 59-94 (220)
429 2ju5_A Thioredoxin disulfide i 74.8 0.79 2.7E-05 30.8 0.6 17 54-70 50-67 (154)
430 2xag_A Lysine-specific histone 74.8 1.2 4E-05 39.0 1.8 20 144-163 278-297 (852)
431 3zzx_A Thioredoxin; oxidoreduc 74.8 0.87 3E-05 28.7 0.7 16 55-70 24-39 (105)
432 3kd9_A Coenzyme A disulfide re 74.8 4.2 0.00014 32.2 4.9 68 52-122 171-246 (449)
433 1zzo_A RV1677; thioredoxin fol 74.8 0.97 3.3E-05 28.8 1.0 18 53-70 27-44 (136)
434 2wfc_A Peroxiredoxin 5, PRDX5; 74.7 1.4 4.7E-05 30.2 1.8 28 59-86 40-71 (167)
435 2c0d_A Thioredoxin peroxidase 74.6 1.9 6.5E-05 31.0 2.6 32 55-86 60-94 (221)
436 2e4g_A Tryptophan halogenase; 74.5 4.5 0.00015 33.1 5.2 48 73-122 199-254 (550)
437 4g65_A TRK system potassium up 74.4 1.6 5.6E-05 35.2 2.4 21 143-163 234-254 (461)
438 3gix_A Thioredoxin-like protei 74.3 0.98 3.3E-05 30.3 1.0 16 55-70 27-42 (149)
439 1d4d_A Flavocytochrome C fumar 74.3 1 3.5E-05 37.3 1.2 19 145-163 127-145 (572)
440 3d1c_A Flavin-containing putat 74.2 3.7 0.00013 31.1 4.3 48 74-123 220-275 (369)
441 1lu4_A Soluble secreted antige 74.1 1 3.5E-05 28.8 1.0 18 53-70 26-43 (136)
442 2weu_A Tryptophan 5-halogenase 74.0 5.3 0.00018 32.1 5.4 47 74-122 179-232 (511)
443 2pyx_A Tryptophan halogenase; 73.9 5.8 0.0002 32.2 5.7 47 74-122 181-235 (526)
444 1qgv_A Spliceosomal protein U5 73.8 1 3.5E-05 29.9 1.0 16 55-70 27-42 (142)
445 2h01_A 2-Cys peroxiredoxin; th 73.7 2.4 8.1E-05 29.4 2.9 33 54-86 34-69 (192)
446 3ha9_A Uncharacterized thiored 73.7 1.4 4.8E-05 29.5 1.7 31 54-85 40-71 (165)
447 3qou_A Protein YBBN; thioredox 73.2 1.9 6.4E-05 31.9 2.4 17 54-70 29-45 (287)
448 3nix_A Flavoprotein/dehydrogen 73.0 6 0.0002 30.6 5.4 49 73-121 111-167 (421)
449 3uma_A Hypothetical peroxiredo 73.0 1.4 4.8E-05 30.8 1.6 29 58-86 64-96 (184)
450 1xzo_A BSSCO, hypothetical pro 73.0 3.3 0.00011 27.7 3.4 33 54-86 36-73 (174)
451 1jfu_A Thiol:disulfide interch 73.0 1.4 4.8E-05 30.2 1.5 17 54-70 63-79 (186)
452 1n8j_A AHPC, alkyl hydroperoxi 72.8 1.5 5.1E-05 30.5 1.6 27 60-86 40-68 (186)
453 1wou_A Thioredoxin -related pr 72.6 1.2 4.1E-05 28.5 1.1 17 54-70 27-50 (123)
454 1qmv_A Human thioredoxin perox 72.4 1.8 6.2E-05 30.1 2.0 33 54-86 37-72 (197)
455 4gut_A Lysine-specific histone 72.4 1.2 4.2E-05 38.4 1.3 19 145-163 337-355 (776)
456 1o73_A Tryparedoxin; electron 72.3 1.2 4.1E-05 29.0 1.0 17 54-70 31-47 (144)
457 1i5g_A Tryparedoxin II; electr 72.3 1.2 4.1E-05 29.1 1.0 17 54-70 31-47 (144)
458 1uul_A Tryparedoxin peroxidase 72.3 1.9 6.4E-05 30.3 2.1 33 54-86 39-74 (202)
459 2lus_A Thioredoxion; CR-Trp16, 74.8 0.76 2.6E-05 29.8 0.0 17 54-70 29-45 (143)
460 2dbc_A PDCL2, unnamed protein 72.2 1.1 3.8E-05 29.4 0.8 16 55-70 34-49 (135)
461 2b5x_A YKUV protein, TRXY; thi 72.2 1.2 4.1E-05 28.8 1.0 17 54-70 32-48 (148)
462 1kng_A Thiol:disulfide interch 72.1 1.2 4.2E-05 29.3 1.0 18 53-70 44-61 (156)
463 4b63_A L-ornithine N5 monooxyg 72.1 1.5 5.2E-05 35.6 1.7 18 146-163 41-58 (501)
464 3cgv_A Geranylgeranyl reductas 72.1 10 0.00035 28.9 6.5 48 73-120 107-162 (397)
465 1y56_B Sarcosine oxidase; dehy 72.0 5.3 0.00018 30.5 4.8 45 74-120 155-205 (382)
466 1o8x_A Tryparedoxin, TRYX, TXN 72.0 1.2 4.2E-05 29.1 1.0 17 54-70 31-47 (146)
467 2uzz_A N-methyl-L-tryptophan o 71.6 4 0.00014 31.0 4.0 46 73-120 154-204 (372)
468 3pl8_A Pyranose 2-oxidase; sub 71.4 1.3 4.4E-05 37.2 1.2 19 145-163 47-65 (623)
469 3ps9_A TRNA 5-methylaminomethy 71.3 7.1 0.00024 32.8 5.7 45 74-120 423-473 (676)
470 1qo8_A Flavocytochrome C3 fuma 71.1 8.8 0.0003 31.5 6.2 49 73-121 255-313 (566)
471 3ktb_A Arsenical resistance op 71.1 4 0.00014 26.2 3.2 41 7-48 40-84 (106)
472 4at0_A 3-ketosteroid-delta4-5a 71.0 11 0.00036 30.5 6.6 48 73-120 207-264 (510)
473 4evm_A Thioredoxin family prot 71.0 1.2 4.2E-05 28.2 0.8 17 54-70 25-41 (138)
474 2b1k_A Thiol:disulfide interch 70.8 1.4 4.6E-05 29.7 1.0 31 54-86 54-84 (168)
475 2i81_A 2-Cys peroxiredoxin; st 70.7 2.2 7.4E-05 30.4 2.1 33 54-86 55-90 (213)
476 3atr_A Conserved archaeal prot 70.7 7.1 0.00024 30.9 5.4 50 74-123 106-165 (453)
477 3gyk_A 27KDA outer membrane pr 70.7 1.1 3.7E-05 30.6 0.5 28 53-81 24-51 (175)
478 3tdg_A DSBG, putative uncharac 70.4 1.3 4.4E-05 33.4 0.9 21 50-70 146-166 (273)
479 4g2e_A Peroxiredoxin; redox pr 70.3 2.6 8.8E-05 28.3 2.4 32 55-86 34-68 (157)
480 2gf3_A MSOX, monomeric sarcosi 70.1 7.2 0.00025 29.7 5.2 46 73-120 155-205 (389)
481 3ka7_A Oxidoreductase; structu 69.8 11 0.00037 29.2 6.2 44 74-119 202-251 (425)
482 3mng_A Peroxiredoxin-5, mitoch 69.4 1.5 5.1E-05 30.4 1.0 28 59-86 52-82 (173)
483 3ayj_A Pro-enzyme of L-phenyla 69.4 1.6 5.6E-05 37.4 1.4 19 145-163 57-75 (721)
484 2pn8_A Peroxiredoxin-4; thiore 69.3 2.3 7.9E-05 30.2 2.0 32 55-86 52-86 (211)
485 1tp9_A Peroxiredoxin, PRX D (t 69.1 2.7 9.2E-05 28.3 2.2 29 58-86 42-75 (162)
486 3ztl_A Thioredoxin peroxidase; 69.0 2.5 8.5E-05 30.3 2.1 32 55-86 73-107 (222)
487 1xvw_A Hypothetical protein RV 68.6 1.2 4E-05 29.7 0.3 17 54-70 39-56 (160)
488 2hyx_A Protein DIPZ; thioredox 68.5 2.4 8.2E-05 33.0 2.1 33 54-86 85-119 (352)
489 2znm_A Thiol:disulfide interch 68.5 4.9 0.00017 27.7 3.6 30 54-84 25-54 (195)
490 3ixr_A Bacterioferritin comigr 68.5 2.2 7.6E-05 29.3 1.8 31 56-86 56-89 (179)
491 3nrn_A Uncharacterized protein 68.4 8.1 0.00028 30.0 5.2 43 74-119 195-242 (421)
492 3p2a_A Thioredoxin 2, putative 68.2 1.7 5.8E-05 28.6 1.1 17 54-70 58-74 (148)
493 1v98_A Thioredoxin; oxidoreduc 68.0 1.7 5.8E-05 28.3 1.0 17 54-70 53-69 (140)
494 4a9w_A Monooxygenase; baeyer-v 67.8 5.4 0.00019 29.8 4.0 33 91-125 257-290 (357)
495 3kp9_A Vkorc1/thioredoxin doma 67.6 0.96 3.3E-05 34.4 -0.3 47 2-49 215-261 (291)
496 3h8v_A Ubiquitin-like modifier 67.6 1.9 6.5E-05 32.8 1.3 20 145-164 37-56 (292)
497 3l8k_A Dihydrolipoyl dehydroge 67.5 8.9 0.0003 30.5 5.3 42 82-123 225-275 (466)
498 3h93_A Thiol:disulfide interch 67.4 2.6 9E-05 29.1 2.0 28 54-82 28-55 (192)
499 1k0i_A P-hydroxybenzoate hydro 67.4 21 0.00073 27.2 7.4 51 73-123 108-166 (394)
500 3fw2_A Thiol-disulfide oxidore 67.3 3.2 0.00011 27.2 2.3 32 55-86 37-73 (150)
No 1
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.84 E-value=1.1e-20 Score=158.48 Aligned_cols=162 Identities=41% Similarity=0.716 Sum_probs=126.1
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEec------------------------------
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHID------------------------------ 51 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig------------------------------ 51 (164)
++.+|++.+++|+.++++.++++.++++++.+++|.+++|++|+++++++
T Consensus 34 ~k~~L~~~~i~~~~~dv~~~~~~~~~~~~l~~~~g~~tvP~v~i~g~~igG~~~l~~~~~~g~L~~~l~~~~~~~dvvVI 113 (598)
T 2x8g_A 34 VKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIETVPQMFVRGKFIGDSQTVLKYYSNDELAGIVNESKYDYDLIVI 113 (598)
T ss_dssp HHHHHHHTTCCCEEEEGGGSTTHHHHHHHTHHHHSCCCSCEEEETTEEEECHHHHHHHHHTTCHHHHHHCCSSSEEEEEE
T ss_pred HHHHHHHCCCCcEEEEcccCcchHHHHHHHHHHhCCceeCEEEECCEEEEeeehhhhhhhcCcchhhcccccccccEEEE
Confidence 45678889999999999999888999999999999999999999999986
Q ss_pred ----------------CCceEEEec--c------C-----Cc--ccccccc-----------------------------
Q psy7674 52 ----------------NNSVVIFSK--S------W-----CP--FCTKAKE----------------------------- 71 (164)
Q Consensus 52 ----------------~d~vvv~~~--~------~-----cp--~~~~~~~----------------------------- 71 (164)
+.+++++.+ + | |. +|.+.+.
T Consensus 114 G~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 193 (598)
T 2x8g_A 114 GGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSLDRSKISHN 193 (598)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGCCCC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCccccCCcCccC
Confidence 334444553 1 1 11 2322110
Q ss_pred h----------------hhHHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCCCCCCc-cce
Q psy7674 72 N----------------NYEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGA-HLG 131 (164)
Q Consensus 72 ~----------------~~~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p~i~g~-~~v 131 (164)
+ .++..+++.+|+++.+.+.+++.+.+.+ ++....+.||+||+|||++|+.|++||. +++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~~~~ 273 (598)
T 2x8g_A 194 WSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGAVEYG 273 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCEEECCCSSTTHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCCCCCCCCCCcccce
Confidence 0 1122356679999999988888887776 2322469999999999999999999997 566
Q ss_pred echhhhccCcCCCCcEEEECCcHHHHHhhccc
Q psy7674 132 ITSDDLFSLNKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 132 ~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l 163 (164)
.++++++.+...+++++|||||++|+|+|..|
T Consensus 274 ~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l 305 (598)
T 2x8g_A 274 ITSDDLFSLPYFPGKTLVIGASYVALECAGFL 305 (598)
T ss_dssp EEHHHHTTCSSCCCSEEEECCSHHHHHHHHHH
T ss_pred EcHHHHhhCccCCCEEEEECCCHHHHHHHHHH
Confidence 78888888877889999999999999999876
No 2
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.68 E-value=9e-17 Score=133.59 Aligned_cols=90 Identities=51% Similarity=0.824 Sum_probs=78.0
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEe--C---CeeEEEEeceEEEecCCCCCCCCCC-Cc-cceechhhhccCcCCCCc
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKF--A---GEERTVSAQNFIIAVGGRPTYPDIP-GA-HLGITSDDLFSLNKDPGK 146 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v--~---~~~~~~~~d~liiAtGs~~~~p~i~-g~-~~v~~~~~~~~~~~~~~~ 146 (164)
+...+++.+|+++.|.+.+++++++.+ . +..+.+.+|++||||||+|+.|+.+ +. +.++++++++.+.+.|++
T Consensus 146 ~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~P~~~~~~~~~~~ts~~~l~l~~lP~~ 225 (542)
T 4b1b_A 146 YMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPDDVEGAKELSITSDDIFSLKKDPGK 225 (542)
T ss_dssp HHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECCCSSSBTHHHHCBCHHHHTTCSSCCCS
T ss_pred HHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCCCCcccCCCccccCchhhhccccCCce
Confidence 445678889999999999999998876 1 2346799999999999999999754 44 678899999999999999
Q ss_pred EEEECCcHHHHHhhccc
Q psy7674 147 VLLVGASYIALECAGCD 163 (164)
Q Consensus 147 vvViGgG~~g~E~A~~l 163 (164)
++|||||+||+|+|..|
T Consensus 226 lvIIGgG~IGlE~A~~~ 242 (542)
T 4b1b_A 226 TLVVGASYVALECSGFL 242 (542)
T ss_dssp EEEECCSHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHH
Confidence 99999999999999876
No 3
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.54 E-value=1.1e-14 Score=120.45 Aligned_cols=89 Identities=52% Similarity=0.812 Sum_probs=77.4
Q ss_pred HHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCCCCCCc-cceechhhhccCcCCCCcEEEE
Q psy7674 75 EKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGA-HLGITSDDLFSLNKDPGKVLLV 150 (164)
Q Consensus 75 ~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p~i~g~-~~v~~~~~~~~~~~~~~~vvVi 150 (164)
...++..+|+++.+++.+++++.+.+ +++...+.||++|||||++|+.|++||. +++.++++++.+...+++++||
T Consensus 137 ~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~p~i~G~~~~~~t~~~~~~l~~~~~~vvVI 216 (519)
T 3qfa_A 137 RVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVV 216 (519)
T ss_dssp HHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECCCCCTTHHHHCBCHHHHTTCSSCCCSEEEE
T ss_pred HHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCCCCCCCccCceEcHHHHhhhhhcCCeEEEE
Confidence 34567789999999999999888777 2322479999999999999999999997 6778899999888889999999
Q ss_pred CCcHHHHHhhccc
Q psy7674 151 GASYIALECAGCD 163 (164)
Q Consensus 151 GgG~~g~E~A~~l 163 (164)
|||++|+|+|..|
T Consensus 217 GgG~ig~E~A~~l 229 (519)
T 3qfa_A 217 GASYVALECAGFL 229 (519)
T ss_dssp CCSHHHHHHHHHH
T ss_pred CCcHHHHHHHHHH
Confidence 9999999999876
No 4
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.54 E-value=1.6e-14 Score=118.78 Aligned_cols=90 Identities=30% Similarity=0.546 Sum_probs=77.6
Q ss_pred hHHHHhhc-CceEEeeEEEEeeCcEEEeC--Ce-----eEEEEeceEEEecCCCCCCCCCCCccceechhhhccCcCCCC
Q psy7674 74 YEKELEKN-KIDYFNAKAVFVDKHRVKFA--GE-----ERTVSAQNFIIAVGGRPTYPDIPGAHLGITSDDLFSLNKDPG 145 (164)
Q Consensus 74 ~~~~l~~~-gv~~~~~~~~~~~~~~v~v~--~~-----~~~~~~d~liiAtGs~~~~p~i~g~~~v~~~~~~~~~~~~~~ 145 (164)
+...+++. +|+++.+++++++++++.++ ++ ...+.||+||+|||++|+.|++||.++++++++++.+...++
T Consensus 113 ~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViATGs~p~~p~i~G~~~~~~~~~~~~~~~~~~ 192 (495)
T 2wpf_A 113 YEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGIEHCISSNEAFYLPEPPR 192 (495)
T ss_dssp HHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCEEECCCCCTTGGGCEEHHHHTTCSSCCS
T ss_pred HHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEeCCCCcCCCCCCCccccccHHHHHhhhhcCC
Confidence 34456777 99999999999998888874 11 367999999999999999999999767888999988888899
Q ss_pred cEEEECCcHHHHHhhccc
Q psy7674 146 KVLLVGASYIALECAGCD 163 (164)
Q Consensus 146 ~vvViGgG~~g~E~A~~l 163 (164)
+++|||||++|+|+|..|
T Consensus 193 ~vvViGgG~ig~E~A~~l 210 (495)
T 2wpf_A 193 RVLTVGGGFISVEFAGIF 210 (495)
T ss_dssp EEEEECSSHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHH
Confidence 999999999999999876
No 5
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.54 E-value=1.2e-14 Score=118.05 Aligned_cols=88 Identities=44% Similarity=0.765 Sum_probs=77.0
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCCCCCccceechhhhccCcCCCCcEEEECCc
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGAHLGITSDDLFSLNKDPGKVLLVGAS 153 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~i~g~~~v~~~~~~~~~~~~~~~vvViGgG 153 (164)
++..+++.+++++.+++++++++++.+++ +.+.||++++|||++|+.|++||.+.+.++++++.+...+++++|||||
T Consensus 99 ~~~~~~~~~v~~~~g~~~~i~~~~v~~~g--~~~~~d~lviAtGs~p~~p~i~g~~~~~~~~~~~~~~~~~~~vvViGgG 176 (450)
T 1ges_A 99 YENVLGKNNVDVIKGFARFVDAKTLEVNG--ETITADHILIATGGRPSHPDIPGVEYGIDSDGFFALPALPERVAVVGAG 176 (450)
T ss_dssp HHHHHHHTTCEEEESCCEEEETTEEEETT--EEEEEEEEEECCCEEECCCCSTTGGGSBCHHHHHHCSSCCSEEEEECCS
T ss_pred HHHHHHhCCCEEEEeEEEEecCCEEEECC--EEEEeCEEEECCCCCCCCCCCCCccceecHHHhhhhhhcCCeEEEECCC
Confidence 34556778999999988888888887766 6799999999999999999999976678888988888889999999999
Q ss_pred HHHHHhhccc
Q psy7674 154 YIALECAGCD 163 (164)
Q Consensus 154 ~~g~E~A~~l 163 (164)
++|+|+|..|
T Consensus 177 ~~g~e~A~~l 186 (450)
T 1ges_A 177 YIGVELGGVI 186 (450)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 6
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.53 E-value=2e-14 Score=117.23 Aligned_cols=88 Identities=42% Similarity=0.774 Sum_probs=76.9
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCCCCCccceechhhhccCcCCCCcEEEECCc
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGAHLGITSDDLFSLNKDPGKVLLVGAS 153 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~i~g~~~v~~~~~~~~~~~~~~~vvViGgG 153 (164)
++..+++.+++++.+++.+++.+++.+++ ..+.||++|+|||++|+.|++||.+.+.++++++.+...+++++|||||
T Consensus 98 ~~~~~~~~gv~~~~g~~~~i~~~~v~~~g--~~~~~d~lviAtGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~vvVvGgG 175 (463)
T 2r9z_A 98 WDGYVERLGITRVDGHARFVDAHTIEVEG--QRLSADHIVIATGGRPIVPRLPGAELGITSDGFFALQQQPKRVAIIGAG 175 (463)
T ss_dssp HHHHHHHTTCEEEESCEEEEETTEEEETT--EEEEEEEEEECCCEEECCCSCTTGGGSBCHHHHHHCSSCCSEEEEECCS
T ss_pred HHHHHHHCCCEEEEeEEEEccCCEEEECC--EEEEcCEEEECCCCCCCCCCCCCccceecHHHHhhhhccCCEEEEECCC
Confidence 34556778999999988888888888766 6799999999999999999999976678888888888888999999999
Q ss_pred HHHHHhhccc
Q psy7674 154 YIALECAGCD 163 (164)
Q Consensus 154 ~~g~E~A~~l 163 (164)
++|+|+|..|
T Consensus 176 ~~g~e~A~~l 185 (463)
T 2r9z_A 176 YIGIELAGLL 185 (463)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 7
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.52 E-value=2e-14 Score=117.86 Aligned_cols=90 Identities=53% Similarity=0.919 Sum_probs=77.9
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCCC-CCCc-cceechhhhccCcCCCCcEE
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPD-IPGA-HLGITSDDLFSLNKDPGKVL 148 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p~-i~g~-~~v~~~~~~~~~~~~~~~vv 148 (164)
+...+++.+++++.+++.+++++.+.+ ++....+.||++|||||++|+.|+ +||. +.+.++++++.+...+++++
T Consensus 110 ~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~~i~G~~~~~~~~~~~~~~~~~~~~vv 189 (488)
T 3dgz_A 110 HRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPGKTL 189 (488)
T ss_dssp HHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCSSCBTHHHHCBCHHHHTTCSSCCCSEE
T ss_pred HHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCCCCCCcccccCcHHHHHhhhhcCCeEE
Confidence 445677789999999999999888777 333357999999999999999999 9997 66788999998888899999
Q ss_pred EECCcHHHHHhhccc
Q psy7674 149 LVGASYIALECAGCD 163 (164)
Q Consensus 149 ViGgG~~g~E~A~~l 163 (164)
|||||++|+|+|..|
T Consensus 190 ViGgG~ig~E~A~~l 204 (488)
T 3dgz_A 190 VVGASYVALECAGFL 204 (488)
T ss_dssp EECCSHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHH
Confidence 999999999999876
No 8
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.50 E-value=2.9e-14 Score=113.90 Aligned_cols=89 Identities=24% Similarity=0.365 Sum_probs=70.6
Q ss_pred hhHHHHhhcCceEEee-EEEEeeC--cEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCcccee---chhhhccCcC---
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVDK--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGAHLGI---TSDDLFSLNK--- 142 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~~--~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~~~v~---~~~~~~~~~~--- 142 (164)
...+++++.+++++.+ +++.+|. +++++ ++ +.+.||+||+|||++|+.|++||.++++ +++++..+..
T Consensus 67 ~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~~~yd~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~l~ 144 (385)
T 3klj_A 67 KKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSG--EKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDECK 144 (385)
T ss_dssp SCHHHHHHTTCEEECSCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHHhh
Confidence 3567788899999988 6778874 56766 45 6899999999999999999999865444 4566554443
Q ss_pred CCCcEEEECCcHHHHHhhccc
Q psy7674 143 DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l 163 (164)
.+++++|||||++|+|+|..|
T Consensus 145 ~~~~vvVIGgG~~g~E~A~~l 165 (385)
T 3klj_A 145 NKGKAFIIGGGILGIELAQAI 165 (385)
T ss_dssp HHSCEEEECCSHHHHHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHH
Confidence 268999999999999999876
No 9
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.50 E-value=4.4e-14 Score=115.20 Aligned_cols=87 Identities=21% Similarity=0.311 Sum_probs=75.1
Q ss_pred HHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCC-CCCccceechhhhccCcC-CCCcEEEECC
Q psy7674 75 EKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD-IPGAHLGITSDDLFSLNK-DPGKVLLVGA 152 (164)
Q Consensus 75 ~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~-i~g~~~v~~~~~~~~~~~-~~~~vvViGg 152 (164)
..++++.+++++.+++++++++++.+++ ..+.||++|+|||++|+.|+ +++...++++++++.+.+ .+++++||||
T Consensus 100 ~~~~~~~gv~~~~g~~~~~~~~~v~v~g--~~~~~d~lViATGs~p~~p~gi~~~~~v~~~~~~~~l~~~~~~~vvViGg 177 (464)
T 2eq6_A 100 GTLLKGNGVELLRGFARLVGPKEVEVGG--ERYGAKSLILATGSEPLELKGFPFGEDVWDSTRALKVEEGLPKRLLVIGG 177 (464)
T ss_dssp HHHHHHTTCEEEESCEEEEETTEEEETT--EEEEEEEEEECCCEEECCBTTBCCSSSEECHHHHTCGGGCCCSEEEEECC
T ss_pred HHHHHhCCCEEEeeeEEEccCCEEEEcc--EEEEeCEEEEcCCCCCCCCCCCCCCCcEEcHHHHHhhhhhcCCEEEEECC
Confidence 4556778999999988888888888775 67999999999999999887 887446789999988877 7899999999
Q ss_pred cHHHHHhhccc
Q psy7674 153 SYIALECAGCD 163 (164)
Q Consensus 153 G~~g~E~A~~l 163 (164)
|++|+|+|..|
T Consensus 178 G~~g~e~A~~l 188 (464)
T 2eq6_A 178 GAVGLELGQVY 188 (464)
T ss_dssp SHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999999876
No 10
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.50 E-value=5.9e-14 Score=115.23 Aligned_cols=90 Identities=29% Similarity=0.490 Sum_probs=77.3
Q ss_pred hHHHHhhc-CceEEeeEEEEeeCcEEEeC-----Ce--eEEEEeceEEEecCCCCCCCCCCCccceechhhhccCcCCCC
Q psy7674 74 YEKELEKN-KIDYFNAKAVFVDKHRVKFA-----GE--ERTVSAQNFIIAVGGRPTYPDIPGAHLGITSDDLFSLNKDPG 145 (164)
Q Consensus 74 ~~~~l~~~-gv~~~~~~~~~~~~~~v~v~-----~~--~~~~~~d~liiAtGs~~~~p~i~g~~~v~~~~~~~~~~~~~~ 145 (164)
+...+++. +|+++.+++++++++++.+. +. ...+.||++++|||++|+.|++||.+.++++++++.+...++
T Consensus 109 ~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~p~~p~i~g~~~~~~~~~~~~~~~~~~ 188 (490)
T 1fec_A 109 YEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYLDEAPK 188 (490)
T ss_dssp HHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCEEECCCCSBTGGGCBCHHHHTTCSSCCS
T ss_pred HHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCCCCCCCCCCCCccceecHHHHhhhhhcCC
Confidence 34556778 99999999999998888873 22 157999999999999999999998767789999998888899
Q ss_pred cEEEECCcHHHHHhhccc
Q psy7674 146 KVLLVGASYIALECAGCD 163 (164)
Q Consensus 146 ~vvViGgG~~g~E~A~~l 163 (164)
+++|||||++|+|+|..|
T Consensus 189 ~vvViGgG~ig~E~A~~l 206 (490)
T 1fec_A 189 RALCVGGGYISIEFAGIF 206 (490)
T ss_dssp EEEEECSSHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHH
Confidence 999999999999999875
No 11
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.49 E-value=6.8e-14 Score=113.99 Aligned_cols=89 Identities=30% Similarity=0.434 Sum_probs=74.9
Q ss_pred HHHHhhc-CceEEeeEEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCCCCCCc--cceechhhhccCcCCCCcEE
Q psy7674 75 EKELEKN-KIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSDDLFSLNKDPGKVL 148 (164)
Q Consensus 75 ~~~l~~~-gv~~~~~~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~~~~~~~~~vv 148 (164)
.+++++. +++++.+++.+++.+.+.+ ++....+.||++|+|||++|+.|++||. ..+++.++++.+...+++++
T Consensus 101 ~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~vv 180 (467)
T 1zk7_A 101 EGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPGLKESPYWTSTEALASDTIPERLA 180 (467)
T ss_dssp HHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCCCTTTTTSCCBCHHHHHHCSSCCSEEE
T ss_pred HHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCCCCCCCcCceecHHHHhcccccCCEEE
Confidence 3556677 9999999988888877666 3322579999999999999999999987 35778888888888899999
Q ss_pred EECCcHHHHHhhccc
Q psy7674 149 LVGASYIALECAGCD 163 (164)
Q Consensus 149 ViGgG~~g~E~A~~l 163 (164)
|||||++|+|+|..|
T Consensus 181 ViGgG~~g~E~A~~l 195 (467)
T 1zk7_A 181 VIGSSVVALELAQAF 195 (467)
T ss_dssp EECCSHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHH
Confidence 999999999999875
No 12
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.48 E-value=1.4e-13 Score=112.40 Aligned_cols=89 Identities=24% Similarity=0.283 Sum_probs=75.5
Q ss_pred HHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCCCCCCc--cceechhhhccCcCCCCcEEE
Q psy7674 75 EKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSDDLFSLNKDPGKVLL 149 (164)
Q Consensus 75 ~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~~~~~~~~~vvV 149 (164)
.+++++.+++++.+++.+++++.+.+ ++....+.||+||+|||++|+.|+++|. ..++++++++.+...+++++|
T Consensus 104 ~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~i~g~~~~~v~t~~~~~~~~~~~~~vvV 183 (474)
T 1zmd_A 104 AHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVV 183 (474)
T ss_dssp HHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCTTCCCCSSSEECHHHHTTCSSCCSEEEE
T ss_pred HHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCCCCCCCcCcEEcHHHHhhccccCceEEE
Confidence 46677889999999888888877666 2122579999999999999999999886 358899999888878899999
Q ss_pred ECCcHHHHHhhccc
Q psy7674 150 VGASYIALECAGCD 163 (164)
Q Consensus 150 iGgG~~g~E~A~~l 163 (164)
||||++|+|+|..|
T Consensus 184 iGgG~~g~E~A~~l 197 (474)
T 1zmd_A 184 IGAGVIGVELGSVW 197 (474)
T ss_dssp ECCSHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHH
Confidence 99999999999876
No 13
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.48 E-value=1.1e-13 Score=112.70 Aligned_cols=87 Identities=21% Similarity=0.332 Sum_probs=75.0
Q ss_pred HHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCC-CCCccceechhhhccCcCCCCcEEEECCc
Q psy7674 75 EKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD-IPGAHLGITSDDLFSLNKDPGKVLLVGAS 153 (164)
Q Consensus 75 ~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~-i~g~~~v~~~~~~~~~~~~~~~vvViGgG 153 (164)
..++++.|++++.+++.+++++++.+++ ..+.||++|+|||++|+.|+ ++....+.++++.+.+.+.+++++|||||
T Consensus 103 ~~~~~~~gv~~~~g~~~~~~~~~v~v~~--~~~~~d~lviATGs~p~~~~~~~~~~~v~~~~~~~~~~~~~~~vvViGgG 180 (458)
T 1lvl_A 103 AALLKKHGVKVVHGWAKVLDGKQVEVDG--QRIQCEHLLLATGSSSVELPMLPLGGPVISSTEALAPKALPQHLVVVGGG 180 (458)
T ss_dssp HHHHHHTTCEEECSCEEEEETTEEEETT--EEEECSEEEECCCEEECCBTTBCCBTTEECHHHHTCCSSCCSEEEEECCS
T ss_pred HHHHHhCCcEEEEEEEEEccCCEEEEee--EEEEeCEEEEeCCCCCCCCCCCCccCcEecHHHHhhhhccCCeEEEECcC
Confidence 4567788999999998888888888865 67999999999999998877 66434688899998888788999999999
Q ss_pred HHHHHhhccc
Q psy7674 154 YIALECAGCD 163 (164)
Q Consensus 154 ~~g~E~A~~l 163 (164)
++|+|+|..|
T Consensus 181 ~~g~e~A~~l 190 (458)
T 1lvl_A 181 YIGLELGIAY 190 (458)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 14
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.48 E-value=8.4e-14 Score=113.95 Aligned_cols=88 Identities=60% Similarity=1.064 Sum_probs=76.7
Q ss_pred HHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCCCCCCc-cceechhhhccCcCCCCcEEEE
Q psy7674 75 EKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGA-HLGITSDDLFSLNKDPGKVLLV 150 (164)
Q Consensus 75 ~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p~i~g~-~~v~~~~~~~~~~~~~~~vvVi 150 (164)
...+++.+++++.+.+.+++++.+.+ ++. ..+.||++|+|||++|+.|++||. +...++++++.+...+++++||
T Consensus 115 ~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~-~~~~~d~lviATGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~~vvVi 193 (483)
T 3dgh_A 115 RVDLRDKKVEYINGLGSFVDSHTLLAKLKSGE-RTITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLDREPGKTLVV 193 (483)
T ss_dssp HHHHHHTTCEEECSEEEEEETTEEEEECTTCC-EEEEEEEEEECCCEEECCCSSTTHHHHCBCHHHHTTCSSCCCEEEEE
T ss_pred HHHHHhCCCEEEEeEEEEccCCEEEEEeCCCe-EEEEcCEEEEeCCCCcCCCCCCCcccccCcHHHHhhhhhcCCcEEEE
Confidence 34567789999999999999888777 332 479999999999999999999997 6678899999888889999999
Q ss_pred CCcHHHHHhhccc
Q psy7674 151 GASYIALECAGCD 163 (164)
Q Consensus 151 GgG~~g~E~A~~l 163 (164)
|||++|+|+|..|
T Consensus 194 GgG~~g~E~A~~l 206 (483)
T 3dgh_A 194 GAGYIGLECAGFL 206 (483)
T ss_dssp CCSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9999999999876
No 15
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.46 E-value=1.7e-13 Score=111.58 Aligned_cols=89 Identities=24% Similarity=0.425 Sum_probs=75.8
Q ss_pred HHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCCCCCCc--cceechhhhccCcCCCCcEEE
Q psy7674 75 EKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSDDLFSLNKDPGKVLL 149 (164)
Q Consensus 75 ~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~~~~~~~~~vvV 149 (164)
..++++.+++++.+++.+++++.+.+ ++....+.||++|+|||++|+.|+++|. ..++++++++.+...+++++|
T Consensus 100 ~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~~g~~~~~v~t~~~~~~~~~~~~~vvV 179 (468)
T 2qae_A 100 EYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVV 179 (468)
T ss_dssp HHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTTBCCCSSSEECHHHHHTCSSCCSEEEE
T ss_pred HHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCCCCCCcCceechHHHhhcccCCceEEE
Confidence 45677789999999988888877666 3322579999999999999999998886 468899999988888899999
Q ss_pred ECCcHHHHHhhccc
Q psy7674 150 VGASYIALECAGCD 163 (164)
Q Consensus 150 iGgG~~g~E~A~~l 163 (164)
||||++|+|+|..|
T Consensus 180 iGgG~~g~E~A~~l 193 (468)
T 2qae_A 180 IGGGVIGLELGSVW 193 (468)
T ss_dssp ECCSHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHH
Confidence 99999999999876
No 16
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.46 E-value=1.1e-13 Score=113.23 Aligned_cols=89 Identities=39% Similarity=0.663 Sum_probs=75.2
Q ss_pred HHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCC-CCCCccceechhhhccCcCCCCcEEEE
Q psy7674 75 EKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYP-DIPGAHLGITSDDLFSLNKDPGKVLLV 150 (164)
Q Consensus 75 ~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p-~i~g~~~v~~~~~~~~~~~~~~~vvVi 150 (164)
+..+++.+++++.+++..++++.+.+ ++....+.||++|+|||++|+.| ++||.+.+.++++++.+...+++++||
T Consensus 112 ~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~i~g~~~~~~~~~~~~l~~~~~~vvVi 191 (479)
T 2hqm_A 112 QKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPGFELGTDSDGFFRLEEQPKKVVVV 191 (479)
T ss_dssp HHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTTSTTGGGSBCHHHHHHCSSCCSEEEEE
T ss_pred HHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCCCCcccccchHHHhcccccCCeEEEE
Confidence 45567789999999988888776666 44223799999999999999999 899976677888988888889999999
Q ss_pred CCcHHHHHhhccc
Q psy7674 151 GASYIALECAGCD 163 (164)
Q Consensus 151 GgG~~g~E~A~~l 163 (164)
|||++|+|+|..|
T Consensus 192 GgG~ig~E~A~~l 204 (479)
T 2hqm_A 192 GAGYIGIELAGVF 204 (479)
T ss_dssp CSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9999999999876
No 17
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.46 E-value=3.8e-14 Score=116.61 Aligned_cols=89 Identities=33% Similarity=0.684 Sum_probs=66.1
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEeCC------------eeEEEEeceEEEecCCCCCCCCCCCccceechhhhccCc
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKFAG------------EERTVSAQNFIIAVGGRPTYPDIPGAHLGITSDDLFSLN 141 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v~~------------~~~~~~~d~liiAtGs~~~~p~i~g~~~v~~~~~~~~~~ 141 (164)
+...+++.+++++.+++..++++++.+.. +...+.||+||+|||++|+.|++||.+++.++++++.+.
T Consensus 95 ~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p~i~G~~~~~~~~~~~~~~ 174 (500)
T 1onf_A 95 YRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKGIENTISSDEFFNIK 174 (500)
T ss_dssp HHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCCBCCCSCTTGGGCEEHHHHTTCC
T ss_pred HHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCCCCCCCCcccCHHHHhccC
Confidence 34566788999999987777776666621 125799999999999999999999976678889988877
Q ss_pred CCCCcEEEECCcHHHHHhhccc
Q psy7674 142 KDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 142 ~~~~~vvViGgG~~g~E~A~~l 163 (164)
. +++++|||||++|+|+|..|
T Consensus 175 ~-~~~vvViGgG~ig~E~A~~l 195 (500)
T 1onf_A 175 E-SKKIGIVGSGYIAVELINVI 195 (500)
T ss_dssp C-CSEEEEECCSHHHHHHHHHH
T ss_pred C-CCeEEEECChHHHHHHHHHH
Confidence 7 89999999999999999876
No 18
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.46 E-value=1.2e-13 Score=112.69 Aligned_cols=88 Identities=27% Similarity=0.470 Sum_probs=74.5
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEE--EEeceEEEecCCCCCCCCCCCccceechhhhc----cCcCCC
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERT--VSAQNFIIAVGGRPTYPDIPGAHLGITSDDLF----SLNKDP 144 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~--~~~d~liiAtGs~~~~p~i~g~~~v~~~~~~~----~~~~~~ 144 (164)
+...+++.+++++.+++.+++++.+.+ ++ +. +.||++|+|||++|+.|++||.+.++++++++ .+...+
T Consensus 95 ~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g--~~~~~~~d~lviAtG~~p~~p~i~G~~~~~t~~~~~~~~~~l~~~~ 172 (466)
T 3l8k_A 95 KRNMSQYETLTFYKGYVKIKDPTHVIVKTDEG--KEIEAETRYMIIASGAETAKLRLPGVEYCLTSDDIFGYKTSFRKLP 172 (466)
T ss_dssp HHHHTTCTTEEEESEEEEEEETTEEEEEETTS--CEEEEEEEEEEECCCEEECCCCCTTGGGSBCHHHHHSTTCSCCSCC
T ss_pred HHHHHHhCCCEEEEeEEEEecCCeEEEEcCCC--cEEEEecCEEEECCCCCccCCCCCCccceEeHHHHHHHHHHHhhCC
Confidence 344556779999999999998877666 34 45 99999999999999999999977788888888 566678
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
++++|||||++|+|+|..|
T Consensus 173 ~~vvViGgG~~g~e~A~~l 191 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIF 191 (466)
T ss_dssp SEEEEECCSHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHH
Confidence 9999999999999999876
No 19
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.45 E-value=2.3e-13 Score=110.47 Aligned_cols=90 Identities=27% Similarity=0.375 Sum_probs=74.9
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEe--CCeeEEEEeceEEEecCCCCCCCCCCCc-cceechhhhccCcCCCCcEEEE
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKF--AGEERTVSAQNFIIAVGGRPTYPDIPGA-HLGITSDDLFSLNKDPGKVLLV 150 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v--~~~~~~~~~d~liiAtGs~~~~p~i~g~-~~v~~~~~~~~~~~~~~~vvVi 150 (164)
+.+.+++.+++++.+++.+++++.+.+ .+....+.||++|+|||++|+.|+++|. ..+.++++++.+...+++++||
T Consensus 97 ~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g~~~~v~~~~~~~~~~~~~~~vvVi 176 (455)
T 1ebd_A 97 VEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFKFSNRILDSTGALNLGEVPKSLVVI 176 (455)
T ss_dssp HHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBCCCSSEECHHHHHTCSSCCSEEEEE
T ss_pred HHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCCccceEecHHHHhccccCCCeEEEE
Confidence 345677889999999888888777666 2211579999999999999999998886 4478888988887788999999
Q ss_pred CCcHHHHHhhccc
Q psy7674 151 GASYIALECAGCD 163 (164)
Q Consensus 151 GgG~~g~E~A~~l 163 (164)
|||++|+|+|..|
T Consensus 177 GgG~~g~e~A~~l 189 (455)
T 1ebd_A 177 GGGYIGIELGTAY 189 (455)
T ss_dssp CCSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9999999999876
No 20
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.44 E-value=2.3e-13 Score=110.53 Aligned_cols=90 Identities=24% Similarity=0.334 Sum_probs=75.8
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCCCCCc--cceechhhhccCcCCCCcEEEEC
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSDDLFSLNKDPGKVLLVG 151 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~~~~~~~~~vvViG 151 (164)
+..++++.+++++.+++.+++++.+.+..++..+.||++|+|||++|+.|+++|. ..++++++++.+...+++++|||
T Consensus 95 ~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~~p~~~~~~g~~~~~v~~~~~~~~~~~~~~~vvIiG 174 (455)
T 2yqu_A 95 VEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPLIPPWAQVDYERVVTSTEALSFPEVPKRLIVVG 174 (455)
T ss_dssp HHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCEEECCCTTBCCCSSSEECHHHHTCCSSCCSEEEEEC
T ss_pred HHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCCCCCCCCCCCCCcCcEechHHhhccccCCCeEEEEC
Confidence 3456777899999998888888877773112679999999999999999998876 36889999988877889999999
Q ss_pred CcHHHHHhhccc
Q psy7674 152 ASYIALECAGCD 163 (164)
Q Consensus 152 gG~~g~E~A~~l 163 (164)
||++|+|+|..|
T Consensus 175 gG~~g~e~A~~l 186 (455)
T 2yqu_A 175 GGVIGLELGVVW 186 (455)
T ss_dssp CSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999999865
No 21
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.43 E-value=4.5e-13 Score=109.04 Aligned_cols=90 Identities=21% Similarity=0.237 Sum_probs=74.8
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCCCCCCc-cceechhhhccCcCCCCcEEE
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGA-HLGITSDDLFSLNKDPGKVLL 149 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p~i~g~-~~v~~~~~~~~~~~~~~~vvV 149 (164)
+.+.+++.+++++.+++..++.+.+.+ ++....+.||++|+|||++|+.|+++|. ..++++++++.+...+++++|
T Consensus 97 l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~vvV 176 (464)
T 2a8x_A 97 VHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTSLSANVVTYEEQILSRELPKSIII 176 (464)
T ss_dssp HHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCCCBTTEECHHHHHTCSSCCSEEEE
T ss_pred HHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCceEEecHHHhhccccCCeEEE
Confidence 346677789999999887787776666 2322579999999999999999998886 448888998888878899999
Q ss_pred ECCcHHHHHhhccc
Q psy7674 150 VGASYIALECAGCD 163 (164)
Q Consensus 150 iGgG~~g~E~A~~l 163 (164)
||||++|+|+|..|
T Consensus 177 iGgG~~g~E~A~~l 190 (464)
T 2a8x_A 177 AGAGAIGMEFGYVL 190 (464)
T ss_dssp ECCSHHHHHHHHHH
T ss_pred ECCcHHHHHHHHHH
Confidence 99999999999865
No 22
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.42 E-value=3.2e-13 Score=109.93 Aligned_cols=89 Identities=27% Similarity=0.391 Sum_probs=75.0
Q ss_pred HHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCCCCCCc--cceechhhhccCcCCCCcEEE
Q psy7674 75 EKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSDDLFSLNKDPGKVLL 149 (164)
Q Consensus 75 ~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~~~~~~~~~vvV 149 (164)
...+++.+++++.+++..++.+.+.+ ++....+.||++|+|||++|+.|+++|. ..++++++++.+...+++++|
T Consensus 103 ~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~~g~~~~~v~~~~~~~~~~~~~~~vvV 182 (470)
T 1dxl_A 103 EGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGALALSEIPKKLVV 182 (470)
T ss_dssp HHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTTBCCCSSSEECHHHHTTCSSCCSEEEE
T ss_pred HHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCCCCcccEEeHHHhhhhhhcCCeEEE
Confidence 45667789999999888888877777 2222579999999999999999998886 368899999888878899999
Q ss_pred ECCcHHHHHhhccc
Q psy7674 150 VGASYIALECAGCD 163 (164)
Q Consensus 150 iGgG~~g~E~A~~l 163 (164)
||||++|+|+|..|
T Consensus 183 iGgG~~g~e~A~~l 196 (470)
T 1dxl_A 183 IGAGYIGLEMGSVW 196 (470)
T ss_dssp SCCSHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHH
Confidence 99999999999876
No 23
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.41 E-value=3.6e-13 Score=109.98 Aligned_cols=88 Identities=42% Similarity=0.777 Sum_probs=75.0
Q ss_pred hHHHHhhcCceEEeeEEEEeeCc--EEEeCCeeEEEEeceEEEecCCCCCCC---CCCCccceechhhhccCcCCCCcEE
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKH--RVKFAGEERTVSAQNFIIAVGGRPTYP---DIPGAHLGITSDDLFSLNKDPGKVL 148 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~--~v~v~~~~~~~~~d~liiAtGs~~~~p---~i~g~~~v~~~~~~~~~~~~~~~vv 148 (164)
+...+++.+++++.+++.++++. .+..++ ..+.||++|+|||++|+.| ++||.+.+.++++++.+...+++++
T Consensus 114 ~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~g--~~~~~d~lviAtG~~p~~p~~~~i~G~~~~~~~~~~~~~~~~~~~vv 191 (478)
T 3dk9_A 114 YQNNLTKSHIEIIRGHAAFTSDPKPTIEVSG--KKYTAPHILIATGGMPSTPHESQIPGASLGITSDGFFQLEELPGRSV 191 (478)
T ss_dssp HHHHHHHTTCEEEESCEEECSCSSCEEEETT--EEEECSCEEECCCEEECCCCTTTSTTGGGSBCHHHHTTCCSCCSEEE
T ss_pred HHHHHHhCCcEEEEeEEEEeeCCeEEEEECC--EEEEeeEEEEccCCCCCCCCcCCCCCCceeEchHHhhchhhcCccEE
Confidence 34556778999999998888754 344455 6799999999999999999 8999766788899998888899999
Q ss_pred EECCcHHHHHhhccc
Q psy7674 149 LVGASYIALECAGCD 163 (164)
Q Consensus 149 ViGgG~~g~E~A~~l 163 (164)
|||||++|+|+|..|
T Consensus 192 ViGgG~~g~E~A~~l 206 (478)
T 3dk9_A 192 IVGAGYIAVEMAGIL 206 (478)
T ss_dssp EECCSHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHH
Confidence 999999999999876
No 24
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.40 E-value=1.1e-12 Score=107.31 Aligned_cols=90 Identities=29% Similarity=0.429 Sum_probs=73.7
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEeC-Cee------------EEEEeceEEEecCCCCCCCC-CCCccceechhhhcc
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKFA-GEE------------RTVSAQNFIIAVGGRPTYPD-IPGAHLGITSDDLFS 139 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v~-~~~------------~~~~~d~liiAtGs~~~~p~-i~g~~~v~~~~~~~~ 139 (164)
+...+++.+++++.+++..++.+.+.+. .++ ..+.||++|+|||++|+.|+ ++....++++++++.
T Consensus 101 ~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~~~~i~~~~~v~~~~~~~~ 180 (482)
T 1ojt_A 101 LAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPFIPEDPRIIDSSGALA 180 (482)
T ss_dssp HHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECCCSSCCCCTTEECHHHHTT
T ss_pred HHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCCCCCCCccCcEEcHHHHhc
Confidence 3456677899999998887887777662 111 46899999999999999887 674356889999988
Q ss_pred CcCCCCcEEEECCcHHHHHhhccc
Q psy7674 140 LNKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 140 ~~~~~~~vvViGgG~~g~E~A~~l 163 (164)
+.+.+++++|||||++|+|+|..|
T Consensus 181 ~~~~~~~vvViGgG~ig~E~A~~l 204 (482)
T 1ojt_A 181 LKEVPGKLLIIGGGIIGLEMGTVY 204 (482)
T ss_dssp CCCCCSEEEEESCSHHHHHHHHHH
T ss_pred ccccCCeEEEECCCHHHHHHHHHH
Confidence 888899999999999999999876
No 25
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.40 E-value=8e-13 Score=107.60 Aligned_cols=88 Identities=36% Similarity=0.636 Sum_probs=78.2
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEe--CCeeEEEEeceEEEecCCCCC-CCCCCCccceechhhhccCcCCCCcEEEE
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKF--AGEERTVSAQNFIIAVGGRPT-YPDIPGAHLGITSDDLFSLNKDPGKVLLV 150 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v--~~~~~~~~~d~liiAtGs~~~-~p~i~g~~~v~~~~~~~~~~~~~~~vvVi 150 (164)
+...+++.+++++.+++.+++++.+.+ ++ ..+.||++++|||++|. .|++||.+.++++++.+.+...+++++||
T Consensus 99 ~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~--~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~~~~~~~~~~~v~Vi 176 (463)
T 4dna_A 99 YRKGLANAGAEILDTRAELAGPNTVKLLASG--KTVTAERIVIAVGGHPSPHDALPGHELCITSNEAFDLPALPESILIA 176 (463)
T ss_dssp HHHHHHHHTCEEEESCEEESSSSEEEETTTT--EEEEEEEEEECCCEEECCCTTSTTGGGCBCHHHHTTCSSCCSEEEEE
T ss_pred HHHHHHhCCCEEEEEEEEEeeCCEEEEecCC--eEEEeCEEEEecCCCcccCCCCCCccccccHHHHhhhhcCCCeEEEE
Confidence 445667789999999999999888888 45 78999999999999999 99999987788999999888889999999
Q ss_pred CCcHHHHHhhccc
Q psy7674 151 GASYIALECAGCD 163 (164)
Q Consensus 151 GgG~~g~E~A~~l 163 (164)
|||++|+|+|..|
T Consensus 177 GgG~~g~e~A~~l 189 (463)
T 4dna_A 177 GGGYIAVEFANIF 189 (463)
T ss_dssp CCSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9999999999865
No 26
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.37 E-value=1.6e-12 Score=106.77 Aligned_cols=90 Identities=19% Similarity=0.309 Sum_probs=75.1
Q ss_pred hHHHHhhcCceEEeeEEEEeeC------cEEEe---CCeeEEEEeceEEEecCCCCCCCCCCCc--cceechhhhccCcC
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDK------HRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSDDLFSLNK 142 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~------~~v~v---~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~~~~~ 142 (164)
+.+++++.|++++.+++.+++. +.+.+ +++...+.||++++|||++|+.|+++|. ..++++++++.+..
T Consensus 101 ~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~~p~i~g~~~~~v~~~~~~~~~~~ 180 (499)
T 1xdi_A 101 ITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILPSAQPDGERILTWRQLYDLDA 180 (499)
T ss_dssp HHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEECCCGGGCCCSSSEEEGGGGGGCSS
T ss_pred HHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCCCCCCcCcEEehhHhhhhhc
Confidence 4566778899999999888887 66666 3411379999999999999999998886 45788899888888
Q ss_pred CCCcEEEECCcHHHHHhhccc
Q psy7674 143 DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l 163 (164)
.+++++|||||++|+|+|..|
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l 201 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAY 201 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHH
Confidence 889999999999999999865
No 27
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.37 E-value=1.4e-12 Score=105.68 Aligned_cols=88 Identities=20% Similarity=0.312 Sum_probs=65.7
Q ss_pred HHHHhhcCceEEee-EEEEeeC--cEEEe----CCeeEEEEeceEEEecCCCCCCCCCCCcccee---chhhhccCc---
Q psy7674 75 EKELEKNKIDYFNA-KAVFVDK--HRVKF----AGEERTVSAQNFIIAVGGRPTYPDIPGAHLGI---TSDDLFSLN--- 141 (164)
Q Consensus 75 ~~~l~~~gv~~~~~-~~~~~~~--~~v~v----~~~~~~~~~d~liiAtGs~~~~p~i~g~~~v~---~~~~~~~~~--- 141 (164)
+.++++.+++++.+ +++.+|. +.+.+ +++...+.||+||||||++|+.|+++|. .++ +.+++..+.
T Consensus 64 ~~~~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~-~~~~~~~~~~~~~l~~~~ 142 (437)
T 4eqs_A 64 EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESD-ITFTLRNLEDTDAIDQFI 142 (437)
T ss_dssp HHHHHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCCCCCT-TEECCSSHHHHHHHHHHH
T ss_pred HHHHHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCccccccccCc-eEEeeccHHHHHHHHHhh
Confidence 45677889999876 5677764 44444 3334579999999999999999999984 333 344444332
Q ss_pred --CCCCcEEEECCcHHHHHhhccc
Q psy7674 142 --KDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 142 --~~~~~vvViGgG~~g~E~A~~l 163 (164)
..+++++|||||++|+|+|..|
T Consensus 143 ~~~~~~~vvViGgG~ig~E~A~~l 166 (437)
T 4eqs_A 143 KANQVDKVLVVGAGYVSLEVLENL 166 (437)
T ss_dssp HHHTCCEEEEECCSHHHHHHHHHH
T ss_pred hccCCcEEEEECCccchhhhHHHH
Confidence 2478999999999999999875
No 28
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.36 E-value=1.6e-12 Score=107.50 Aligned_cols=83 Identities=34% Similarity=0.536 Sum_probs=73.2
Q ss_pred hhcCceEE-eeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCCCCCc--cceechhhhc-cCcCCC-CcEEEECCc
Q psy7674 79 EKNKIDYF-NAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSDDLF-SLNKDP-GKVLLVGAS 153 (164)
Q Consensus 79 ~~~gv~~~-~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~-~~~~~~-~~vvViGgG 153 (164)
++.+++++ .+++.+++++++.+++ ..+.||++|+|||++|..|+++|. ..++++++++ .+...+ ++++|||||
T Consensus 146 ~~~gv~~~~~~~v~~i~~~~v~~~g--~~~~~d~lViATGs~p~~p~i~G~~~~~v~~~~~~~~~l~~~~g~~vvViGgG 223 (523)
T 1mo9_A 146 EQLNLEYILNCPAKVIDNHTVEAAG--KVFKAKNLILAVGAGPGTLDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGS 223 (523)
T ss_dssp HTSCCCEEESSCCEEEETTEEEETT--EEEEBSCEEECCCEECCCCCSTTTTSBTEEEHHHHHHHCCSCCCSEEEEECCS
T ss_pred ccCCcEEEEeeEEEEeeCCEEEECC--EEEEeCEEEECCCCCCCCCCCCCcccCcEeeHHHHHHHHHhcCCCeEEEECCC
Confidence 67899998 8888889888888775 679999999999999999999987 3488999988 777778 999999999
Q ss_pred HHHHHhhccc
Q psy7674 154 YIALECAGCD 163 (164)
Q Consensus 154 ~~g~E~A~~l 163 (164)
++|+|+|..|
T Consensus 224 ~~g~E~A~~l 233 (523)
T 1mo9_A 224 KTAVEYGCFF 233 (523)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 29
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.36 E-value=1.9e-12 Score=105.59 Aligned_cols=90 Identities=20% Similarity=0.355 Sum_probs=74.5
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCCCCCCc--cceechhhhccCcCCCCcEE
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSDDLFSLNKDPGKVL 148 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~~~~~~~~~vv 148 (164)
+...+++.+++++.+++.+++++.+.+ ++....+.||++|+|||++|..|+.++. ..++++++++.+...+++++
T Consensus 105 ~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~~~~~~~~v~~~~~~~~~~~~~~~v~ 184 (476)
T 3lad_A 105 VASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPPAPVDQDVIVDSTGALDFQNVPGKLG 184 (476)
T ss_dssp HHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTTSCCCSSSEEEHHHHTSCSSCCSEEE
T ss_pred HHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCCCCCCcccEEechhhhccccCCCeEE
Confidence 345667789999999999888777666 3323579999999999999987765443 67889999988888899999
Q ss_pred EECCcHHHHHhhccc
Q psy7674 149 LVGASYIALECAGCD 163 (164)
Q Consensus 149 ViGgG~~g~E~A~~l 163 (164)
|||||++|+|+|..|
T Consensus 185 ViGgG~~g~e~A~~l 199 (476)
T 3lad_A 185 VIGAGVIGLELGSVW 199 (476)
T ss_dssp EECCSHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHH
Confidence 999999999999875
No 30
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.35 E-value=1.7e-13 Score=108.74 Aligned_cols=88 Identities=25% Similarity=0.339 Sum_probs=68.0
Q ss_pred hHHHHhhcCceEEee-EEEEeeCc--EEEeCCeeEEEEeceEEEecCCCCCCCCCCCccceec---hhhhccCcC---CC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVDKH--RVKFAGEERTVSAQNFIIAVGGRPTYPDIPGAHLGIT---SDDLFSLNK---DP 144 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~~~--~v~v~~~~~~~~~d~liiAtGs~~~~p~i~g~~~v~~---~~~~~~~~~---~~ 144 (164)
..+++++.+++++.+ ++..+|+. ++..++ ..+.||++|+|||++|+.|++||.+++++ .+++..+.+ .+
T Consensus 66 ~~~~~~~~~v~~~~g~~v~~id~~~~~V~~~g--~~~~~d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~~~~~ 143 (367)
T 1xhc_A 66 SLDWYRKRGIEIRLAEEAKLIDRGRKVVITEK--GEVPYDTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENS 143 (367)
T ss_dssp CHHHHHHHTEEEECSCCEEEEETTTTEEEESS--CEEECSEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHHHHHH
T ss_pred CHHHHHhCCcEEEECCEEEEEECCCCEEEECC--cEEECCEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHHhhcC
Confidence 456778889999998 57888754 444344 67999999999999999999998655554 455544432 24
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
++++|||||++|+|+|..|
T Consensus 144 ~~vvViGgG~~g~E~A~~l 162 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNL 162 (367)
T ss_dssp SEEEEEECSHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHH
Confidence 8999999999999999876
No 31
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.35 E-value=5.2e-12 Score=97.03 Aligned_cols=90 Identities=18% Similarity=0.110 Sum_probs=63.2
Q ss_pred hHHHHhhcCceEEeeEEEEee--Cc--EEEeCCeeEEEEeceEEEecCCCCCCCCCCCcc-----ceechhhhccCc--C
Q psy7674 74 YEKELEKNKIDYFNAKAVFVD--KH--RVKFAGEERTVSAQNFIIAVGGRPTYPDIPGAH-----LGITSDDLFSLN--K 142 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~--~~--~v~v~~~~~~~~~d~liiAtGs~~~~p~i~g~~-----~v~~~~~~~~~~--~ 142 (164)
+...+++.++++...++.... .. .+..++ ...+.||++|+|||++|+.|++||.+ .+..+....... .
T Consensus 72 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~ 150 (314)
T 4a5l_A 72 MRTQSEKYGTTIITETIDHVDFSTQPFKLFTEE-GKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIF 150 (314)
T ss_dssp HHHHHHHTTCEEECCCEEEEECSSSSEEEEETT-CCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGG
T ss_pred HHHHHhhcCcEEEEeEEEEeecCCCceEEEECC-CeEEEEeEEEEcccccccccCCCccccccccceeeehhhhhhhhhc
Confidence 455667788988877665542 22 232322 26899999999999999999999961 233333333222 3
Q ss_pred CCCcEEEECCcHHHHHhhcccC
Q psy7674 143 DPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l~ 164 (164)
.+++++|||||++|+|+|..|+
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~ 172 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLT 172 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHT
T ss_pred CCCeEEEECCChHHHHHHHHHH
Confidence 4689999999999999998764
No 32
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.34 E-value=9.6e-12 Score=102.83 Aligned_cols=89 Identities=17% Similarity=0.192 Sum_probs=65.0
Q ss_pred hhHHHHhhcCceEEee-EEEEeeC-------cEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc-c----ceechhhhc
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVDK-------HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA-H----LGITSDDLF 138 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~~-------~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~-~----~v~~~~~~~ 138 (164)
.+...++++|++++.+ ++..++. ..+.+ ++ ..+.||++|+|||++|+.|++||. + .+..+....
T Consensus 272 ~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g--~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~ 349 (521)
T 1hyu_A 272 ALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASG--AVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCD 349 (521)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTS--CEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCC
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCC--CEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCc
Confidence 3456677889999998 7777753 23444 44 579999999999999999999986 2 233333222
Q ss_pred cCcCCCCcEEEECCcHHHHHhhccc
Q psy7674 139 SLNKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 139 ~~~~~~~~vvViGgG~~g~E~A~~l 163 (164)
.....+++|+|||||++|+|+|..|
T Consensus 350 ~~~~~~k~V~ViGgG~~g~E~A~~L 374 (521)
T 1hyu_A 350 GPLFKGKRVAVIGGGNSGVEAAIDL 374 (521)
T ss_dssp GGGGBTSEEEEECCSHHHHHHHHHH
T ss_pred hhhcCCCeEEEECCCHHHHHHHHHH
Confidence 1223468999999999999999876
No 33
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.34 E-value=8.2e-13 Score=108.47 Aligned_cols=80 Identities=34% Similarity=0.518 Sum_probs=71.2
Q ss_pred CceEEeeEEEEeeCcEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc--cceechhhhccCcCCCCcEEEECCcHHHHH
Q psy7674 82 KIDYFNAKAVFVDKHRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSDDLFSLNKDPGKVLLVGASYIALE 158 (164)
Q Consensus 82 gv~~~~~~~~~~~~~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~~~~~~~~~vvViGgG~~g~E 158 (164)
+++++.+++.+.+.+++.+ ++ ..+.||++|+|||++|+.|++++. ++++++++++.+...+++++|||||++|+|
T Consensus 111 ~~~~~~g~a~~~~~~~v~~~~~--~~~~~d~lViATGs~p~~p~~~~~~~~~v~t~~~~~~~~~~~k~vvViGgG~ig~E 188 (492)
T 3ic9_A 111 EQDKIRGFAKFLDEHTLQVDDH--SQVIAKRIVIATGSRPNYPEFLAAAGSRLLTNDNLFELNDLPKSVAVFGPGVIGLE 188 (492)
T ss_dssp GGGEEESCEEEEETTEEEETTT--EEEEEEEEEECCCEECCCCHHHHTTGGGEECHHHHTTCSSCCSEEEEESSCHHHHH
T ss_pred CeeEEEEEEEEecCCEEEEcCC--cEEEeCEEEEccCCCCcCCCCCCccCCcEEcHHHHhhhhhcCCeEEEECCCHHHHH
Confidence 5778899999999999988 55 689999999999999999986653 678999999998888999999999999999
Q ss_pred hhccc
Q psy7674 159 CAGCD 163 (164)
Q Consensus 159 ~A~~l 163 (164)
+|..|
T Consensus 189 ~A~~l 193 (492)
T 3ic9_A 189 LGQAL 193 (492)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
No 34
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.33 E-value=3.1e-12 Score=104.67 Aligned_cols=90 Identities=31% Similarity=0.613 Sum_probs=75.8
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCC-CCCCCCccceechhhhccCcCCCCcEEEECC
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPT-YPDIPGAHLGITSDDLFSLNKDPGKVLLVGA 152 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~-~p~i~g~~~v~~~~~~~~~~~~~~~vvViGg 152 (164)
+...+++.+++++.+++.+++.+.+.+..+...+.||++++|||++|. .|++||.+.+.++++++.+...+++++||||
T Consensus 120 ~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G~~~~~~~~~~~~~~~~~~~v~ViGg 199 (484)
T 3o0h_A 120 YREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNSAIKGSDLCLTSNEIFDLEKLPKSIVIVGG 199 (484)
T ss_dssp HHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEECCC--CBTGGGSBCTTTGGGCSSCCSEEEEECC
T ss_pred HHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcccCCCCCCccccccHHHHHhHHhcCCcEEEECc
Confidence 345567789999999999999988888311268999999999999999 8999998777888999888888999999999
Q ss_pred cHHHHHhhccc
Q psy7674 153 SYIALECAGCD 163 (164)
Q Consensus 153 G~~g~E~A~~l 163 (164)
|++|+|+|..|
T Consensus 200 G~~g~e~A~~l 210 (484)
T 3o0h_A 200 GYIGVEFANIF 210 (484)
T ss_dssp SHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999999765
No 35
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.31 E-value=4.7e-12 Score=101.62 Aligned_cols=85 Identities=25% Similarity=0.353 Sum_probs=66.8
Q ss_pred HHhhcCceEEeeE-EEEeeC--cEEEe-CCeeEEEEeceEEEecCCCCCCCCC-CCc-ccee---chhhhccCc---CCC
Q psy7674 77 ELEKNKIDYFNAK-AVFVDK--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDI-PGA-HLGI---TSDDLFSLN---KDP 144 (164)
Q Consensus 77 ~l~~~gv~~~~~~-~~~~~~--~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i-~g~-~~v~---~~~~~~~~~---~~~ 144 (164)
++++.+++++.++ +..++. +++.+ ++ ..+.||+||+|||++|+.|++ ||. ++++ +++++..+. ..+
T Consensus 68 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~~~~ 145 (408)
T 2gqw_A 68 CKRAPEVEWLLGVTAQSFDPQAHTVALSDG--RTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLRPQ 145 (408)
T ss_dssp CTTSCSCEEEETCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTCCTT
T ss_pred HHHHCCCEEEcCCEEEEEECCCCEEEECCC--CEEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHhhcC
Confidence 4567799999985 788874 56766 44 579999999999999999998 886 3443 566654443 247
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
++++|||||++|+|+|..|
T Consensus 146 ~~vvViGgG~~g~E~A~~l 164 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATA 164 (408)
T ss_dssp CEEEEECCSHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHH
Confidence 9999999999999999876
No 36
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.30 E-value=6e-12 Score=96.95 Aligned_cols=88 Identities=16% Similarity=0.128 Sum_probs=59.1
Q ss_pred HHHHhhcCceEEeeEE-EEee-C-cE-EEeCCeeEEEEeceEEEecCCCCCCCCCCCcc-----ceechhhhccCcCCCC
Q psy7674 75 EKELEKNKIDYFNAKA-VFVD-K-HR-VKFAGEERTVSAQNFIIAVGGRPTYPDIPGAH-----LGITSDDLFSLNKDPG 145 (164)
Q Consensus 75 ~~~l~~~gv~~~~~~~-~~~~-~-~~-v~v~~~~~~~~~d~liiAtGs~~~~p~i~g~~-----~v~~~~~~~~~~~~~~ 145 (164)
.....+.+..+..+.. ...+ . .. +..++ ..+.||++|||||++|+.|++||.+ .+..+.........++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k 146 (312)
T 4gcm_A 69 FEHAKKFGAVYQYGDIKSVEDKGEYKVINFGN--KELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNK 146 (312)
T ss_dssp HHHHHHTTCEEEECCCCEEEECSSCEEEECSS--CEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGGGGTTC
T ss_pred HHHHhhccccccceeeeeeeeeecceeeccCC--eEEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCccccCCC
Confidence 3445566666665532 2222 2 22 22244 6899999999999999999999962 2333333223334578
Q ss_pred cEEEECCcHHHHHhhcccC
Q psy7674 146 KVLLVGASYIALECAGCDK 164 (164)
Q Consensus 146 ~vvViGgG~~g~E~A~~l~ 164 (164)
+++|||||++|+|+|..|+
T Consensus 147 ~vvViGgG~ig~E~A~~l~ 165 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLT 165 (312)
T ss_dssp EEEEECCSHHHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHH
Confidence 9999999999999998764
No 37
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.30 E-value=1.3e-11 Score=99.03 Aligned_cols=86 Identities=26% Similarity=0.399 Sum_probs=67.9
Q ss_pred HHHhhcCceEEee-EEEEeeC--cEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc--ccee---chhhhccCc---CC
Q psy7674 76 KELEKNKIDYFNA-KAVFVDK--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGI---TSDDLFSLN---KD 143 (164)
Q Consensus 76 ~~l~~~gv~~~~~-~~~~~~~--~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~---~~~~~~~~~---~~ 143 (164)
+++++.+++++.+ +++.++. +++.+ ++ ..+.||+|++|||++|+.|++||. ++++ +.+++..+. ..
T Consensus 65 ~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~~~ 142 (410)
T 3ef6_A 65 DWYGEARIDMLTGPEVTALDVQTRTISLDDG--TTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTS 142 (410)
T ss_dssp THHHHTTCEEEESCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHCCT
T ss_pred HHHHHCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHhcc
Confidence 5667889999999 7888874 46666 45 679999999999999999999986 4454 455554433 34
Q ss_pred CCcEEEECCcHHHHHhhccc
Q psy7674 144 PGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 144 ~~~vvViGgG~~g~E~A~~l 163 (164)
+++++|||||++|+|+|..|
T Consensus 143 ~~~vvViGgG~~g~E~A~~l 162 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTA 162 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHH
Confidence 78999999999999999765
No 38
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.29 E-value=1.3e-11 Score=100.12 Aligned_cols=90 Identities=23% Similarity=0.297 Sum_probs=68.4
Q ss_pred hHHHHhhcCceEEee-EEEEee--CcEEEe--CCeeEEEEeceEEEecCCCCCCCCCCCc--cceechhhhc------cC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVD--KHRVKF--AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSDDLF------SL 140 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~--~~~v~v--~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~------~~ 140 (164)
..+++++.+++++.+ ++..++ .+.+.+ .++...+.||++++|||++|+.|++||. +.++++.++. ..
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~ 143 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPL 143 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHH
T ss_pred CHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHH
Confidence 456778899999765 666776 345555 3344689999999999999999999987 4566654332 22
Q ss_pred cCCCCcEEEECCcHHHHHhhccc
Q psy7674 141 NKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 141 ~~~~~~vvViGgG~~g~E~A~~l 163 (164)
...+++++|||||++|+|+|..|
T Consensus 144 ~~~~~~vvViGgG~~g~E~A~~l 166 (452)
T 3oc4_A 144 LENSQTVAVIGAGPIGMEAIDFL 166 (452)
T ss_dssp HHTCSEEEEECCSHHHHHHHHHH
T ss_pred HhcCCEEEEECCCHHHHHHHHHH
Confidence 34679999999999999999875
No 39
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.29 E-value=1.3e-11 Score=101.21 Aligned_cols=88 Identities=31% Similarity=0.471 Sum_probs=71.6
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCCCCCCc------cceechhhhccCcCCC
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGA------HLGITSDDLFSLNKDP 144 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p~i~g~------~~v~~~~~~~~~~~~~ 144 (164)
+...+++.+++++.+++.+++++.+.+ ++....+.||++|+|||++|. ++||. ..+.++++++.+...+
T Consensus 121 ~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~--~ipg~~~~~~~~~~~~~~~~~~~~~~~ 198 (491)
T 3urh_A 121 VSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVA--GIPGVEVAFDEKTIVSSTGALALEKVP 198 (491)
T ss_dssp HHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEECC--CBTTBCCCCCSSSEECHHHHTSCSSCC
T ss_pred HHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCC--CCCCcccccCCeeEEehhHhhhhhhcC
Confidence 345577789999999999998877777 333357999999999999874 34432 4578889998888889
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
++++|||||++|+|+|..|
T Consensus 199 ~~vvViGgG~~g~E~A~~l 217 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVW 217 (491)
T ss_dssp SEEEEECCSHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHH
Confidence 9999999999999999875
No 40
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.26 E-value=1e-11 Score=101.28 Aligned_cols=90 Identities=27% Similarity=0.416 Sum_probs=69.3
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEe---CCeeEE------EEeceEEEecCCCCCCCC-CCCc-cceechhhhccCcC
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERT------VSAQNFIIAVGGRPTYPD-IPGA-HLGITSDDLFSLNK 142 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v---~~~~~~------~~~d~liiAtGs~~~~p~-i~g~-~~v~~~~~~~~~~~ 142 (164)
+.+.+++.+++++.++..+.+.+.+.+ ++.... +.||++|+|||++|+.++ ++.. ..+.++++++.+..
T Consensus 102 ~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~~~~g~~~~~~~v~~~~~~~~~~~ 181 (478)
T 1v59_A 102 IELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFPGIEIDEEKIVSSTGALSLKE 181 (478)
T ss_dssp HHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEECCCTTCCCCSSSEECHHHHTTCSS
T ss_pred HHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCCCCCCCCCCCceEEcHHHHHhhhc
Confidence 345677889999999887777766666 231135 999999999999984322 2211 35889999988877
Q ss_pred CCCcEEEECCcHHHHHhhccc
Q psy7674 143 DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l 163 (164)
.+++++|||||++|+|+|..|
T Consensus 182 ~~~~vvViGgG~~g~e~A~~l 202 (478)
T 1v59_A 182 IPKRLTIIGGGIIGLEMGSVY 202 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHH
T ss_pred cCceEEEECCCHHHHHHHHHH
Confidence 889999999999999999876
No 41
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.25 E-value=7.6e-12 Score=101.08 Aligned_cols=87 Identities=20% Similarity=0.391 Sum_probs=67.9
Q ss_pred HHHHhhcCceEEee-EEEEeeC--cEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc--cc---ee---chhhhccCc-
Q psy7674 75 EKELEKNKIDYFNA-KAVFVDK--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA--HL---GI---TSDDLFSLN- 141 (164)
Q Consensus 75 ~~~l~~~gv~~~~~-~~~~~~~--~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~---v~---~~~~~~~~~- 141 (164)
.+++++.+++++.+ .+..++. +++.+ ++ +.+.||+||+|||++|+.|++||. .. ++ +++++..+.
T Consensus 67 ~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g--~~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~ 144 (431)
T 1q1r_A 67 PDAYAAQNIQLLGGTQVTAINRDRQQVILSDG--RALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRR 144 (431)
T ss_dssp HHHHHHTTEEEECSCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHH
T ss_pred HHHHHhCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHH
Confidence 46778889999987 4677764 56766 44 579999999999999999999986 33 43 456654433
Q ss_pred --CCCCcEEEECCcHHHHHhhccc
Q psy7674 142 --KDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 142 --~~~~~vvViGgG~~g~E~A~~l 163 (164)
..+++++|||||++|+|+|..|
T Consensus 145 ~l~~~~~vvViGgG~~g~E~A~~l 168 (431)
T 1q1r_A 145 QLIADNRLVVIGGGYIGLEVAATA 168 (431)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHH
T ss_pred HhhcCCeEEEECCCHHHHHHHHHH
Confidence 3479999999999999999875
No 42
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.25 E-value=3.4e-12 Score=101.46 Aligned_cols=88 Identities=20% Similarity=0.238 Sum_probs=67.8
Q ss_pred hHHHHhhcCceEEee-EEEEeeC--cEEEeCCeeEEEEeceEEEecCCCCCCCCCCCc--cceechhhhccCc------C
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVDK--HRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSDDLFSLN------K 142 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~~--~~v~v~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~~~~------~ 142 (164)
...++++.+++++.+ ++..++. +++.+++ ..+.||++++|||++|+.|++||. +.+++.+++.++. .
T Consensus 66 ~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~--~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~~ 143 (384)
T 2v3a_A 66 PGAMAEQLNARILTHTRVTGIDPGHQRIWIGE--EEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAA 143 (384)
T ss_dssp HHHHHHHTTCEEECSCCCCEEEGGGTEEEETT--EEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHHT
T ss_pred HHHHHHhCCcEEEeCCEEEEEECCCCEEEECC--cEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhhc
Confidence 345567889999876 4666764 6677765 479999999999999999999986 4566655443321 2
Q ss_pred CCCcEEEECCcHHHHHhhccc
Q psy7674 143 DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l 163 (164)
.+++++|||||++|+|+|..|
T Consensus 144 ~~~~v~ViGgG~~g~e~A~~l 164 (384)
T 2v3a_A 144 GKRRVLLLGAGLIGCEFANDL 164 (384)
T ss_dssp TCCEEEEECCSHHHHHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHH
Confidence 479999999999999999876
No 43
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.25 E-value=1.9e-11 Score=97.99 Aligned_cols=88 Identities=26% Similarity=0.328 Sum_probs=68.9
Q ss_pred hHHHHhhcCceEEee-EEEEeeC--cEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc--ccee---chhhhccCc---
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVDK--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGI---TSDDLFSLN--- 141 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~~--~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~---~~~~~~~~~--- 141 (164)
...++++.+++++.+ ++..++. +.+.+ ++ ..+.||++++|||++|+.|++||. ..++ +.+++..+.
T Consensus 71 ~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~ 148 (415)
T 3lxd_A 71 PAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDG--SAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAEL 148 (415)
T ss_dssp CHHHHHHTTEEEEETCCEEEEETTTTEEEETTS--CEEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHH
T ss_pred CHHHHHHCCcEEEeCCEEEEEECCCCEEEECCC--CEEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHh
Confidence 356778899999998 7888874 45666 44 689999999999999999999986 4454 455554432
Q ss_pred CC-CCcEEEECCcHHHHHhhccc
Q psy7674 142 KD-PGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 142 ~~-~~~vvViGgG~~g~E~A~~l 163 (164)
.. +++++|||||++|+|+|..|
T Consensus 149 ~~~~~~vvViGgG~~g~e~A~~l 171 (415)
T 3lxd_A 149 DAGAKNAVVIGGGYIGLEAAAVL 171 (415)
T ss_dssp HTTCCEEEEECCSHHHHHHHHHH
T ss_pred hhcCCeEEEECCCHHHHHHHHHH
Confidence 23 78999999999999999765
No 44
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.23 E-value=1.7e-11 Score=100.55 Aligned_cols=90 Identities=29% Similarity=0.356 Sum_probs=67.3
Q ss_pred hHHHHhhcCceEEee-EEEEee--CcEEEeC--CeeEEEEeceEEEecCCCCCCCCCCCcc-------------ceec--
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVD--KHRVKFA--GEERTVSAQNFIIAVGGRPTYPDIPGAH-------------LGIT-- 133 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~--~~~v~v~--~~~~~~~~d~liiAtGs~~~~p~i~g~~-------------~v~~-- 133 (164)
..+.+++.|++++.+ ++..++ .+.+.+. ++...+.||++|+|||++|+.|++||.+ ++++
T Consensus 98 ~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~ 177 (490)
T 2bc0_A 98 DKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVK 177 (490)
T ss_dssp CHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECS
T ss_pred CHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeC
Confidence 456778889999776 467776 4566663 3335799999999999999999888743 3443
Q ss_pred ----hhhhccCc--CCCCcEEEECCcHHHHHhhccc
Q psy7674 134 ----SDDLFSLN--KDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 134 ----~~~~~~~~--~~~~~vvViGgG~~g~E~A~~l 163 (164)
.++++... ..+++++|||||++|+|+|..|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l 213 (490)
T 2bc0_A 178 LYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAF 213 (490)
T ss_dssp SHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHH
Confidence 23333333 5679999999999999999876
No 45
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.23 E-value=3.1e-11 Score=96.58 Aligned_cols=88 Identities=26% Similarity=0.445 Sum_probs=68.5
Q ss_pred hHHHHhhcCceEEeeEEEEeeC--cEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc--ccee---chhhhccCc---C
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDK--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGI---TSDDLFSLN---K 142 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~--~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~---~~~~~~~~~---~ 142 (164)
..+++.+.+++++..+++.++. +.+.+ ++ ..+.||+|++|||++|+.|++||. .+++ +.+++..+. .
T Consensus 63 ~~~~~~~~~i~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~ 140 (404)
T 3fg2_P 63 PEKFFQDQAIELISDRMVSIDREGRKLLLASG--TAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMP 140 (404)
T ss_dssp CHHHHHHTTEEEECCCEEEEETTTTEEEESSS--CEEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHGG
T ss_pred CHHHHHhCCCEEEEEEEEEEECCCCEEEECCC--CEEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHhh
Confidence 4577888999998877788874 45666 44 679999999999999999999986 4555 344444332 2
Q ss_pred CCCcEEEECCcHHHHHhhccc
Q psy7674 143 DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l 163 (164)
.+++++|||||++|+|+|..|
T Consensus 141 ~~~~vvViGgG~~g~e~A~~l 161 (404)
T 3fg2_P 141 DKKHVVVIGAGFIGLEFAATA 161 (404)
T ss_dssp GCSEEEEECCSHHHHHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHH
Confidence 468999999999999999765
No 46
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.22 E-value=1.7e-11 Score=99.30 Aligned_cols=90 Identities=26% Similarity=0.412 Sum_probs=66.5
Q ss_pred hHHHHhhcCceEEee-EEEEee--CcEEEe-C---CeeEEEEeceEEEecCCCCCCCCCCCc--cceech---hhhccCc
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVD--KHRVKF-A---GEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITS---DDLFSLN 141 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~--~~~v~v-~---~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~---~~~~~~~ 141 (164)
+.+++++.|++++.+ .+..++ .+++.+ + ++...+.||++|+|||++|+.|++||. ++++++ +++..+.
T Consensus 62 ~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~ 141 (447)
T 1nhp_A 62 TGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLK 141 (447)
T ss_dssp CHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHH
T ss_pred CHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence 456778889999776 455564 466666 2 322358999999999999999999986 456653 4433321
Q ss_pred ---C--CCCcEEEECCcHHHHHhhccc
Q psy7674 142 ---K--DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 142 ---~--~~~~vvViGgG~~g~E~A~~l 163 (164)
. .+++++|||||++|+|+|..|
T Consensus 142 ~~~~~~~~~~vvIiG~G~~g~e~A~~l 168 (447)
T 1nhp_A 142 QKTVDPEVNNVVVIGSGYIGIEAAEAF 168 (447)
T ss_dssp HHHTCTTCCEEEEECCSHHHHHHHHHH
T ss_pred HHhhhcCCCeEEEECCCHHHHHHHHHH
Confidence 2 679999999999999999875
No 47
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.21 E-value=1.8e-11 Score=99.20 Aligned_cols=90 Identities=26% Similarity=0.386 Sum_probs=68.0
Q ss_pred hHHHHhhcCceEEee-EEEEee--CcEEEe-C---CeeEEEEeceEEEecCCCCCCCCCCCc--cceech------hhhc
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVD--KHRVKF-A---GEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITS------DDLF 138 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~--~~~v~v-~---~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~------~~~~ 138 (164)
+.+.+++.+++++.+ ++..++ .+++.+ + ++...+.||++++|||++|+.|++||. ++++++ ++++
T Consensus 64 ~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~ 143 (452)
T 2cdu_A 64 SPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLF 143 (452)
T ss_dssp CHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHH
T ss_pred CHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHH
Confidence 356778889999777 466675 456666 2 223679999999999999999999986 445542 2344
Q ss_pred cCcCCCCcEEEECCcHHHHHhhccc
Q psy7674 139 SLNKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 139 ~~~~~~~~vvViGgG~~g~E~A~~l 163 (164)
.....+++++|||||++|+|+|..|
T Consensus 144 ~~~~~~~~vvViGgG~~g~E~A~~l 168 (452)
T 2cdu_A 144 EEAPKAKTITIIGSGYIGAELAEAY 168 (452)
T ss_dssp HHGGGCSEEEEECCSHHHHHHHHHH
T ss_pred HHhccCCeEEEECcCHHHHHHHHHH
Confidence 4445689999999999999999875
No 48
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.19 E-value=5e-12 Score=104.18 Aligned_cols=84 Identities=25% Similarity=0.407 Sum_probs=61.9
Q ss_pred hcCceEEeeEEEEeeC--cEEEeC-------------------CeeEEEEeceEEEecCCCCCCCCCCCc-ccee---ch
Q psy7674 80 KNKIDYFNAKAVFVDK--HRVKFA-------------------GEERTVSAQNFIIAVGGRPTYPDIPGA-HLGI---TS 134 (164)
Q Consensus 80 ~~gv~~~~~~~~~~~~--~~v~v~-------------------~~~~~~~~d~liiAtGs~~~~p~i~g~-~~v~---~~ 134 (164)
+.+++|+.++++.+|. +++++. ++...+.||+||||||++|+.|++||. ++.+ +.
T Consensus 108 ~~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~ 187 (502)
T 4g6h_A 108 KGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEI 187 (502)
T ss_dssp SSCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSH
T ss_pred cCCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCH
Confidence 4589999999998874 556541 223679999999999999999999997 5443 33
Q ss_pred hhhccCc--------------C------CCCcEEEECCcHHHHHhhccc
Q psy7674 135 DDLFSLN--------------K------DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 135 ~~~~~~~--------------~------~~~~vvViGgG~~g~E~A~~l 163 (164)
+|+..+. . ...+++|||||++|+|+|..|
T Consensus 188 ~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l 236 (502)
T 4g6h_A 188 PNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGEL 236 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHH
Confidence 3333221 0 124799999999999999875
No 49
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.15 E-value=8.9e-11 Score=90.02 Aligned_cols=89 Identities=16% Similarity=0.192 Sum_probs=65.6
Q ss_pred hhHHHHhhcCceEEee-EEEEeeC-------cEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc-c----ceechhhhc
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVDK-------HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA-H----LGITSDDLF 138 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~~-------~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~-~----~v~~~~~~~ 138 (164)
.+++.+++.+++++.+ ++..++. ..+.+ ++ ..+.||++|+|||++|..|++||. + .+..+....
T Consensus 61 ~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~ 138 (310)
T 1fl2_A 61 ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASG--AVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCD 138 (310)
T ss_dssp HHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTS--CEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHH
T ss_pred HHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCC--CEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccCc
Confidence 4556677889999998 7777753 23444 34 579999999999999998889886 2 244443332
Q ss_pred cCcCCCCcEEEECCcHHHHHhhccc
Q psy7674 139 SLNKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 139 ~~~~~~~~vvViGgG~~g~E~A~~l 163 (164)
.....+++++|||+|++|+|+|..|
T Consensus 139 ~~~~~~~~v~VvG~G~~g~e~A~~l 163 (310)
T 1fl2_A 139 GPLFKGKRVAVIGGGNSGVEAAIDL 163 (310)
T ss_dssp GGGGBTCEEEEECCSHHHHHHHHHH
T ss_pred HhhcCCCEEEEECCCHHHHHHHHHH
Confidence 2233568999999999999999876
No 50
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.14 E-value=6e-11 Score=96.09 Aligned_cols=85 Identities=26% Similarity=0.416 Sum_probs=64.1
Q ss_pred hhcCceEEee-EEEEeeCcEEEe--CCeeEEEEeceEEEecCCCCCCCCCCCc--cceec---hhhhccCcC-----CCC
Q psy7674 79 EKNKIDYFNA-KAVFVDKHRVKF--AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGIT---SDDLFSLNK-----DPG 145 (164)
Q Consensus 79 ~~~gv~~~~~-~~~~~~~~~v~v--~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~---~~~~~~~~~-----~~~ 145 (164)
++.+++++.+ ++..++.....+ ++....+.||++++|||++|+.|++||. +.+++ .+++..+.. .++
T Consensus 70 ~~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 149 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYMEKYKVE 149 (449)
T ss_dssp HHTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHSSSCCC
T ss_pred HhcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHHhcCCC
Confidence 5789999998 777887654444 3322479999999999999999999986 34543 344433322 468
Q ss_pred cEEEECCcHHHHHhhccc
Q psy7674 146 KVLLVGASYIALECAGCD 163 (164)
Q Consensus 146 ~vvViGgG~~g~E~A~~l 163 (164)
+++|||||++|+|+|..|
T Consensus 150 ~vvViGgG~~g~E~A~~l 167 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAF 167 (449)
T ss_dssp EEEEECCSHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHH
Confidence 999999999999999875
No 51
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.14 E-value=9.9e-11 Score=88.85 Aligned_cols=89 Identities=21% Similarity=0.298 Sum_probs=64.9
Q ss_pred hHHHHhhc-CceEEeeEEEEeeCc----EEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc-c----ceechhhhccCcC
Q psy7674 74 YEKELEKN-KIDYFNAKAVFVDKH----RVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA-H----LGITSDDLFSLNK 142 (164)
Q Consensus 74 ~~~~l~~~-gv~~~~~~~~~~~~~----~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~-~----~v~~~~~~~~~~~ 142 (164)
+.+.+++. +++++.++++.++.. .+.+ ++ ..+.||++|+|||++|+.|++||. . .++.+........
T Consensus 62 ~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 139 (297)
T 3fbs_A 62 ARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGG--RRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYEL 139 (297)
T ss_dssp HHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTS--CEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTGGG
T ss_pred HHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCC--CEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcchhh
Confidence 45566666 799988888777532 4444 44 579999999999999999999986 2 2334332222233
Q ss_pred CCCcEEEECCcHHHHHhhcccC
Q psy7674 143 DPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l~ 164 (164)
.+++++|||+|++|+|+|..|+
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~ 161 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLP 161 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGG
T ss_pred cCCEEEEEecCccHHHHHHHhh
Confidence 5789999999999999998763
No 52
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.13 E-value=6.5e-11 Score=96.82 Aligned_cols=89 Identities=27% Similarity=0.228 Sum_probs=66.2
Q ss_pred HHHH-hhcCceEEee-EEEEee--CcEEEe-C---CeeEEEEeceEEEecCCCCCCCCCCCc--cceec---hhhhccCc
Q psy7674 75 EKEL-EKNKIDYFNA-KAVFVD--KHRVKF-A---GEERTVSAQNFIIAVGGRPTYPDIPGA--HLGIT---SDDLFSLN 141 (164)
Q Consensus 75 ~~~l-~~~gv~~~~~-~~~~~~--~~~v~v-~---~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~---~~~~~~~~ 141 (164)
.+.+ ++.+++++.+ ++..++ .+.+.+ + ++...+.||++|+|||++|+.|++||. +++++ ++++..+.
T Consensus 99 ~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~ 178 (480)
T 3cgb_A 99 VKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERIL 178 (480)
T ss_dssp HHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHH
T ss_pred HHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHH
Confidence 4455 4459999886 566675 456666 2 422379999999999999999999986 44553 56655443
Q ss_pred C-----CCCcEEEECCcHHHHHhhccc
Q psy7674 142 K-----DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 142 ~-----~~~~vvViGgG~~g~E~A~~l 163 (164)
+ .+++++|||||++|+|+|..|
T Consensus 179 ~~~~~~~~~~vvViGgG~~g~e~A~~l 205 (480)
T 3cgb_A 179 KTLETNKVEDVTIIGGGAIGLEMAETF 205 (480)
T ss_dssp HHHHSSCCCEEEEECCHHHHHHHHHHH
T ss_pred HHhhhcCCCeEEEECCCHHHHHHHHHH
Confidence 3 679999999999999999875
No 53
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.13 E-value=1.7e-10 Score=89.10 Aligned_cols=90 Identities=19% Similarity=0.088 Sum_probs=64.7
Q ss_pred hhHHHHhhcCceEEeeEEEEeeCc-------EEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc-c----ceechhhhcc
Q psy7674 73 NYEKELEKNKIDYFNAKAVFVDKH-------RVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA-H----LGITSDDLFS 139 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~~~~~~~~-------~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~-~----~v~~~~~~~~ 139 (164)
.+.+.+++.+++++.+++..++.. .+.. ++ ..+.||++|+|||++|+.|++||. + .+..+.....
T Consensus 70 ~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~ 147 (325)
T 2q7v_A 70 RMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYN--GEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDG 147 (325)
T ss_dssp HHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESS--CEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHG
T ss_pred HHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCC--CEEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCCH
Confidence 345667788999988877766432 3333 44 579999999999999999999886 2 2333332222
Q ss_pred CcCCCCcEEEECCcHHHHHhhcccC
Q psy7674 140 LNKDPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 140 ~~~~~~~vvViGgG~~g~E~A~~l~ 164 (164)
....+++++|||+|++|+|+|..|+
T Consensus 148 ~~~~~~~v~VvG~G~~g~e~A~~l~ 172 (325)
T 2q7v_A 148 FFYKGKKVVVIGGGDAAVEEGMFLT 172 (325)
T ss_dssp GGGTTCEEEEECCSHHHHHHHHHHT
T ss_pred HHcCCCEEEEECCCHHHHHHHHHHH
Confidence 2334689999999999999998763
No 54
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.11 E-value=1.1e-10 Score=96.98 Aligned_cols=87 Identities=22% Similarity=0.315 Sum_probs=63.3
Q ss_pred HHhhcCceEEee-EEEEee--CcEEEe-C---CeeEEEEeceEEEecCCCCCCCCCCCc--cceechh---hhccCc---
Q psy7674 77 ELEKNKIDYFNA-KAVFVD--KHRVKF-A---GEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSD---DLFSLN--- 141 (164)
Q Consensus 77 ~l~~~gv~~~~~-~~~~~~--~~~v~v-~---~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~---~~~~~~--- 141 (164)
+.++.+++++.+ +++.++ .+.+.+ + ++...+.||++++|||++|+.|++||. ..+++.. ++..+.
T Consensus 67 ~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~ 146 (565)
T 3ntd_A 67 FKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTI 146 (565)
T ss_dssp HHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHH
T ss_pred HHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHH
Confidence 334579999765 677776 345555 2 433579999999999999999999986 4455433 222221
Q ss_pred --CCCCcEEEECCcHHHHHhhccc
Q psy7674 142 --KDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 142 --~~~~~vvViGgG~~g~E~A~~l 163 (164)
..+++++|||||++|+|+|..|
T Consensus 147 ~~~~~~~vvViGgG~~g~e~A~~l 170 (565)
T 3ntd_A 147 QMNNVEHATVVGGGFIGLEMMESL 170 (565)
T ss_dssp HHTTCSEEEEECCSHHHHHHHHHH
T ss_pred hhCCCCEEEEECCCHHHHHHHHHH
Confidence 3578999999999999999865
No 55
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.08 E-value=2.7e-10 Score=88.49 Aligned_cols=90 Identities=17% Similarity=0.137 Sum_probs=65.6
Q ss_pred hhHHHHhhcCceEEeeEEEEeeC---cEE-Ee-CCeeEEEEeceEEEecCCCCCCCCCCCc-c----ceechhhhccCcC
Q psy7674 73 NYEKELEKNKIDYFNAKAVFVDK---HRV-KF-AGEERTVSAQNFIIAVGGRPTYPDIPGA-H----LGITSDDLFSLNK 142 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~~~~~~~---~~v-~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~-~----~v~~~~~~~~~~~ 142 (164)
.+.+.+++.+++++.+++..++. .++ .+ ++ ..+.||++|+|||++|..|++||. . .+.++........
T Consensus 76 ~l~~~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g--~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 153 (335)
T 2a87_A 76 EMREQALRFGADLRMEDVESVSLHGPLKSVVTADG--QTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFF 153 (335)
T ss_dssp HHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTS--CEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHHHGGGG
T ss_pred HHHHHHHHcCCEEEEeeEEEEEeCCcEEEEEeCCC--CEEEeCEEEECCCCCccCCCCCchHhccCCceEEeeccchhhc
Confidence 34556777899999888776664 235 44 44 579999999999999999999885 2 2333332222224
Q ss_pred CCCcEEEECCcHHHHHhhcccC
Q psy7674 143 DPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l~ 164 (164)
.+++++|||+|++|+|+|..|+
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~ 175 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLT 175 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHH
Confidence 5689999999999999998763
No 56
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.08 E-value=3e-10 Score=87.90 Aligned_cols=90 Identities=16% Similarity=0.126 Sum_probs=64.3
Q ss_pred hhHHHHhhcCceEEeeEEEEeeC--c--EEEeCCeeEEEEeceEEEecCCCCCCCCCCCc-c--------ceechhhhcc
Q psy7674 73 NYEKELEKNKIDYFNAKAVFVDK--H--RVKFAGEERTVSAQNFIIAVGGRPTYPDIPGA-H--------LGITSDDLFS 139 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~~~~~~~--~--~v~v~~~~~~~~~d~liiAtGs~~~~p~i~g~-~--------~v~~~~~~~~ 139 (164)
.+.+.+++.+++++.+++..++. + ++.+++ ..+.||++|+|||++|..|++||. . .+..+.....
T Consensus 75 ~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~--~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 152 (333)
T 1vdc_A 75 KFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDS--KAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDG 152 (333)
T ss_dssp HHHHHHHHTTCEEECCCCCEEECSSSSEEEECSS--EEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHT
T ss_pred HHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEECC--cEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCcc
Confidence 34566777899999887666653 2 344444 679999999999999999998886 3 1222222222
Q ss_pred Cc--CCCCcEEEECCcHHHHHhhcccC
Q psy7674 140 LN--KDPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 140 ~~--~~~~~vvViGgG~~g~E~A~~l~ 164 (164)
.. ..+++++|||+|++|+|+|..|+
T Consensus 153 ~~~~~~~~~v~VvG~G~~g~e~A~~l~ 179 (333)
T 1vdc_A 153 AAPIFRNKPLAVIGGGDSAMEEANFLT 179 (333)
T ss_dssp TSGGGTTSEEEEECCSHHHHHHHHHHT
T ss_pred chhhcCCCeEEEECCChHHHHHHHHHH
Confidence 22 45689999999999999998763
No 57
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.07 E-value=2.3e-10 Score=87.72 Aligned_cols=89 Identities=20% Similarity=0.155 Sum_probs=64.5
Q ss_pred hhHHHHhhcCceEEeeEEEEee--Cc--EEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc-c----ceechhhhccCcC
Q psy7674 73 NYEKELEKNKIDYFNAKAVFVD--KH--RVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA-H----LGITSDDLFSLNK 142 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~~~~~~--~~--~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~-~----~v~~~~~~~~~~~ 142 (164)
.+.+.+++.+++++.+++..++ .+ .+.+ ++ ..+.||++|+|||++|+.|++||. + .+..+........
T Consensus 64 ~l~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 141 (311)
T 2q0l_A 64 PWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDG--KTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGFFY 141 (311)
T ss_dssp HHHHHHHTTSCEEECSCEEEEEEETTEEEEEETTS--CEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHHGGGG
T ss_pred HHHHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCC--CEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCChhhc
Confidence 3455677789999887776664 34 3434 44 579999999999999999999985 2 2444333322234
Q ss_pred CCCcEEEECCcHHHHHhhccc
Q psy7674 143 DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l 163 (164)
.+++++|||+|++|+|+|..|
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l 162 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYL 162 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHH
Confidence 568999999999999999865
No 58
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.06 E-value=2.1e-11 Score=100.13 Aligned_cols=82 Identities=21% Similarity=0.344 Sum_probs=61.2
Q ss_pred hcCceEEee-EEEEee--CcEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc------ccee---chhhhccCc---CC
Q psy7674 80 KNKIDYFNA-KAVFVD--KHRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA------HLGI---TSDDLFSLN---KD 143 (164)
Q Consensus 80 ~~gv~~~~~-~~~~~~--~~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~------~~v~---~~~~~~~~~---~~ 143 (164)
+.+++++.+ ++..+| .+++.+ ++ ..+.||+||+|||++|+.|++++. ..+. +.+++..+. ..
T Consensus 102 ~~gv~~~~g~~v~~id~~~~~V~~~~g--~~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~ 179 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRDNMVKLNDG--SQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISRE 179 (493)
T ss_dssp TCEEEEEETCCEEEEEGGGTEEEETTS--CEEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHHHHH
T ss_pred cCCeEEEcCCEEEEEECCCCEEEECCC--CEEECCEEEECCCCCCCCCCCcccccccccCceEEEcCHHHHHHHHHHhhc
Confidence 468999988 667676 466777 45 679999999999999998876541 2232 445544433 24
Q ss_pred CCcEEEECCcHHHHHhhccc
Q psy7674 144 PGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 144 ~~~vvViGgG~~g~E~A~~l 163 (164)
+++++|||||++|+|+|..|
T Consensus 180 ~~~vvViGgG~iG~E~A~~l 199 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACAL 199 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHH
Confidence 79999999999999999875
No 59
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.04 E-value=7.4e-11 Score=96.22 Aligned_cols=86 Identities=14% Similarity=0.270 Sum_probs=61.3
Q ss_pred hhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCC-CCCCCCCc--cceechhhhc----------c
Q psy7674 73 NYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRP-TYPDIPGA--HLGITSDDLF----------S 139 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~-~~p~i~g~--~~v~~~~~~~----------~ 139 (164)
.+.+++++.+++++.+... . +.+++++ ..+.||+||+|||++| +.|++||. +.++++.++. .
T Consensus 64 ~~~~~~~~~gv~~~~~~~v--~-~~V~~~~--~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~ 138 (460)
T 1cjc_A 64 TFTQTARSDRCAFYGNVEV--G-RDVTVQE--LQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRE 138 (460)
T ss_dssp HHHHHHTSTTEEEEBSCCB--T-TTBCHHH--HHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTT
T ss_pred HHHHHHHhCCcEEEeeeEE--e-eEEEecc--ceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccc
Confidence 3456777889999876322 1 2333332 2468999999999996 77889986 5677765542 1
Q ss_pred Cc-C-CCCcEEEECCcHHHHHhhccc
Q psy7674 140 LN-K-DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 140 ~~-~-~~~~vvViGgG~~g~E~A~~l 163 (164)
+. . .+++++|||||++|+|+|..|
T Consensus 139 ~~~~~~~~~vvVIGgG~~g~e~A~~L 164 (460)
T 1cjc_A 139 LAPDLSCDTAVILGQGNVALDVARIL 164 (460)
T ss_dssp CCCCTTSSEEEEESCSHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCHHHHHHHHHH
Confidence 11 1 368999999999999999876
No 60
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.02 E-value=1.3e-09 Score=90.49 Aligned_cols=89 Identities=15% Similarity=0.145 Sum_probs=62.5
Q ss_pred hHHHHhhcCc--eEEee-EEEEee--Cc----EEEe-CCeeEEEEeceEEEecC--CCCCCCCCCCcc----c-eechhh
Q psy7674 74 YEKELEKNKI--DYFNA-KAVFVD--KH----RVKF-AGEERTVSAQNFIIAVG--GRPTYPDIPGAH----L-GITSDD 136 (164)
Q Consensus 74 ~~~~l~~~gv--~~~~~-~~~~~~--~~----~v~v-~~~~~~~~~d~liiAtG--s~~~~p~i~g~~----~-v~~~~~ 136 (164)
+...+++.++ .+..+ +++.++ .. ++++ ++ +.+.||+||+||| ++|+.|++||.+ . +.+.+.
T Consensus 93 l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G--~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~ 170 (540)
T 3gwf_A 93 LEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG--EVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHTAAW 170 (540)
T ss_dssp HHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS--CEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEEEEGGGC
T ss_pred HHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC--CEEEeCEEEECCcccccCCCCCCCCccccCCCEEEeecC
Confidence 4455667777 66655 455543 33 3444 44 5799999999999 799999999962 1 334333
Q ss_pred hccCcCCCCcEEEECCcHHHHHhhcccC
Q psy7674 137 LFSLNKDPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 137 ~~~~~~~~~~vvViGgG~~g~E~A~~l~ 164 (164)
.......+++|+|||+|++|+|+|..|+
T Consensus 171 ~~~~~~~~krV~VIG~G~sgve~a~~l~ 198 (540)
T 3gwf_A 171 PEGKSLAGRRVGVIGTGSTGQQVITSLA 198 (540)
T ss_dssp CSSCCCTTSEEEEECCSHHHHHHHHHHT
T ss_pred CCccccccceEEEECCCchHHHHHHHHH
Confidence 3344456799999999999999998764
No 61
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.02 E-value=7.3e-10 Score=84.71 Aligned_cols=90 Identities=16% Similarity=0.101 Sum_probs=66.3
Q ss_pred hhHHHHhhcCceEEeeEEEEe-eC--cEEE--eCCeeEEEEeceEEEecCCCCCCCCCCCc-c----ceechhhhccCcC
Q psy7674 73 NYEKELEKNKIDYFNAKAVFV-DK--HRVK--FAGEERTVSAQNFIIAVGGRPTYPDIPGA-H----LGITSDDLFSLNK 142 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~~~~~-~~--~~v~--v~~~~~~~~~d~liiAtGs~~~~p~i~g~-~----~v~~~~~~~~~~~ 142 (164)
.+...+++.+++++.+++..+ +. .... +..+. .+.||++++|||++|+.|++||. . .+..+........
T Consensus 67 ~~~~~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 145 (315)
T 3r9u_A 67 PWSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGFFY 145 (315)
T ss_dssp HHHHHHTTTCCEEECCCEEEEEECTTSCEEEEETTSC-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGG
T ss_pred HHHHHHHHcCcEEEEEEEEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeeccccccc
Confidence 345677788999998877776 43 3344 53322 79999999999999999999886 2 2334433333334
Q ss_pred CCCcEEEECCcHHHHHhhccc
Q psy7674 143 DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l 163 (164)
.+++++|||+|++|+|+|..|
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l 166 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYL 166 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHH
T ss_pred CcCEEEEECCCHHHHHHHHHH
Confidence 578999999999999999875
No 62
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.01 E-value=7.9e-10 Score=84.92 Aligned_cols=85 Identities=13% Similarity=0.225 Sum_probs=56.8
Q ss_pred HHhhc-CceEEeeEEEEee---C--cEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc-----cceechhhhccCcCCC
Q psy7674 77 ELEKN-KIDYFNAKAVFVD---K--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA-----HLGITSDDLFSLNKDP 144 (164)
Q Consensus 77 ~l~~~-gv~~~~~~~~~~~---~--~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~-----~~v~~~~~~~~~~~~~ 144 (164)
++.++ ++.++.+++..++ . .++.. ++ +.+.||++|||||++|+.|++||. +.+..+.........+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~ 146 (304)
T 4fk1_A 69 EVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDH--TKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGWELKD 146 (304)
T ss_dssp HHTTSTTEEEEECCEEEEEECTTSCEEEEETTC--CEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSGGGTT
T ss_pred HHHhcCCEEEEeeEEEEeeecCCCcEEEEECCC--CEEEeCEEEEccCCccccccccCccccccceeeeccccchhHhcC
Confidence 33443 5667666665542 2 23444 44 689999999999999999999996 2355554444444456
Q ss_pred CcEEEECCcH-HHHHhhccc
Q psy7674 145 GKVLLVGASY-IALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~-~g~E~A~~l 163 (164)
++++|||||. +++|+|..+
T Consensus 147 ~~~~VIggG~~~~~e~a~~~ 166 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLV 166 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHH
T ss_pred CceeeecCCCchhhhHHHHH
Confidence 7788887775 567887654
No 63
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.01 E-value=7.5e-10 Score=85.42 Aligned_cols=92 Identities=15% Similarity=0.101 Sum_probs=66.3
Q ss_pred hhHHHHhhcCceEEeeEEEEeeC--cEEEe--C--CeeEEEEeceEEEecCCCCCCCCCCCc-----cceechhhhccC-
Q psy7674 73 NYEKELEKNKIDYFNAKAVFVDK--HRVKF--A--GEERTVSAQNFIIAVGGRPTYPDIPGA-----HLGITSDDLFSL- 140 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~~~~~~~--~~v~v--~--~~~~~~~~d~liiAtGs~~~~p~i~g~-----~~v~~~~~~~~~- 140 (164)
.+...+++.+++++.++++.++. ..+.+ . .+...+.||++|+|||++|+.|++||. ..+..+......
T Consensus 89 ~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 168 (338)
T 3itj_A 89 RMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAV 168 (338)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTS
T ss_pred HHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEchhcccch
Confidence 45667788899999988777653 33444 1 223678999999999999999999985 133333332222
Q ss_pred -cCCCCcEEEECCcHHHHHhhcccC
Q psy7674 141 -NKDPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 141 -~~~~~~vvViGgG~~g~E~A~~l~ 164 (164)
...+++++|||+|++|+|+|..|+
T Consensus 169 ~~~~~~~v~vvG~G~~g~e~a~~l~ 193 (338)
T 3itj_A 169 PIFRNKPLAVIGGGDSACEEAQFLT 193 (338)
T ss_dssp GGGTTSEEEEECSSHHHHHHHHHHT
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHH
Confidence 235689999999999999998763
No 64
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.01 E-value=1.2e-09 Score=83.66 Aligned_cols=89 Identities=18% Similarity=0.125 Sum_probs=63.7
Q ss_pred hhHHHHhhcCceEEeeEEEEeeCc----EEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc-c----ceechhhhccCcC
Q psy7674 73 NYEKELEKNKIDYFNAKAVFVDKH----RVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA-H----LGITSDDLFSLNK 142 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~~~~~~~~----~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~-~----~v~~~~~~~~~~~ 142 (164)
.+.+.+++.+++++..++..++.. .+.. ++ ..+.||++|+|||+.|+.|++||. . .+..+........
T Consensus 75 ~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 152 (323)
T 3f8d_A 75 VFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRK--GEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAPLF 152 (323)
T ss_dssp HHHHHHHTTTCCEEESCEEEEEEC--CEEEEESSS--CEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGGGG
T ss_pred HHHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCC--CEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCHhHc
Confidence 345667778999988777776532 2333 33 579999999999999999999886 2 2222222222233
Q ss_pred CCCcEEEECCcHHHHHhhccc
Q psy7674 143 DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l 163 (164)
.+++++|||+|++|+|+|..|
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l 173 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEIL 173 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHH
Confidence 568999999999999999765
No 65
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.01 E-value=5.5e-10 Score=85.85 Aligned_cols=90 Identities=17% Similarity=0.113 Sum_probs=64.9
Q ss_pred hhHHHHhhcCceEEeeEEEEeeC--cEEE-e-CCeeEEEEeceEEEecCCCCCCCCCCCc-c----ceechhhhccCcCC
Q psy7674 73 NYEKELEKNKIDYFNAKAVFVDK--HRVK-F-AGEERTVSAQNFIIAVGGRPTYPDIPGA-H----LGITSDDLFSLNKD 143 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~~~~~~~--~~v~-v-~~~~~~~~~d~liiAtGs~~~~p~i~g~-~----~v~~~~~~~~~~~~ 143 (164)
.+...+++.+++++.+++..++. +.+. . ++ ..+.||++++|||++|..|++||. . .+.++.........
T Consensus 67 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~--~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 144 (320)
T 1trb_A 67 RMHEHATKFETEIIFDHINKVDLQNRPFRLNGDN--GEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGFFYR 144 (320)
T ss_dssp HHHHHHHHTTCEEECCCEEEEECSSSSEEEEESS--CEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHHHHGGGGT
T ss_pred HHHHHHHHCCCEEEEeeeeEEEecCCEEEEEeCC--CEEEcCEEEECCCCCcCCCCCCChHHhCCceeEecccCCccccC
Confidence 34566778899999988777753 2333 2 44 579999999999999999988875 1 23333222222245
Q ss_pred CCcEEEECCcHHHHHhhcccC
Q psy7674 144 PGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 144 ~~~vvViGgG~~g~E~A~~l~ 164 (164)
+++++|||+|++|+|+|..|+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~ 165 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLS 165 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHH
Confidence 789999999999999998763
No 66
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.00 E-value=5.8e-10 Score=93.17 Aligned_cols=90 Identities=19% Similarity=0.334 Sum_probs=65.1
Q ss_pred hHHHHhhcCceEEee-EEEEee--CcEEEe----CCeeEEEEeceEEEecCCCCCCCCCCCc---cceechhhhccC---
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVD--KHRVKF----AGEERTVSAQNFIIAVGGRPTYPDIPGA---HLGITSDDLFSL--- 140 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~--~~~v~v----~~~~~~~~~d~liiAtGs~~~~p~i~g~---~~v~~~~~~~~~--- 140 (164)
++...++.+++++.+ +++.++ .+.+.+ ++....+.||++++|||++|+.|++||. +.+++..+....
T Consensus 99 ~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~ 178 (588)
T 3ics_A 99 VERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRI 178 (588)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHH
T ss_pred HHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHH
Confidence 345556789999765 566665 455655 2422378999999999999999999985 345554333222
Q ss_pred -----cCCCCcEEEECCcHHHHHhhccc
Q psy7674 141 -----NKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 141 -----~~~~~~vvViGgG~~g~E~A~~l 163 (164)
...+++++|||||++|+|+|..|
T Consensus 179 ~~~l~~~~~~~vvViGgG~~g~e~A~~l 206 (588)
T 3ics_A 179 KAYIDEKKPRHATVIGGGFIGVEMVENL 206 (588)
T ss_dssp HHHHHHHCCSEEEEECCSHHHHHHHHHH
T ss_pred HHHHhhcCCCeEEEECCCHHHHHHHHHH
Confidence 13579999999999999999865
No 67
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.98 E-value=1.2e-09 Score=84.08 Aligned_cols=89 Identities=10% Similarity=0.001 Sum_probs=63.1
Q ss_pred hHHHHhhcCceEEeeEEEEee--Cc--EEEeCCeeEEEEeceEEEecCCCCCCCCCCCc-c----ceechhhhccCcCCC
Q psy7674 74 YEKELEKNKIDYFNAKAVFVD--KH--RVKFAGEERTVSAQNFIIAVGGRPTYPDIPGA-H----LGITSDDLFSLNKDP 144 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~--~~--~v~v~~~~~~~~~d~liiAtGs~~~~p~i~g~-~----~v~~~~~~~~~~~~~ 144 (164)
+.+.+++.+++++.+++..++ .+ .+..++ ..+.||++|+|||++|+.|++||. . .+..+.........+
T Consensus 78 ~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~--~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 155 (319)
T 3cty_A 78 FADHAANYAKIREGVEVRSIKKTQGGFDIETND--DTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGYLFKG 155 (319)
T ss_dssp HHHHHHTTSEEEETCCEEEEEEETTEEEEEESS--SEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGGGGBT
T ss_pred HHHHHHHcCCEEEEeeEEEEEEeCCEEEEEECC--CEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecchhhcCC
Confidence 445667789999887776665 34 233344 579999999999999999998875 2 233322222222346
Q ss_pred CcEEEECCcHHHHHhhcccC
Q psy7674 145 GKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l~ 164 (164)
++++|||||++|+|+|..|+
T Consensus 156 ~~v~viG~G~~g~e~a~~l~ 175 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMS 175 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHH
Confidence 89999999999999998763
No 68
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.97 E-value=1.8e-09 Score=89.85 Aligned_cols=89 Identities=15% Similarity=0.174 Sum_probs=58.4
Q ss_pred hHHHHhhcCc--eEEee-EEEEee--Cc----EEEe-CCeeEEEEeceEEEecC--CCCCCCCCCCcc-----ceechhh
Q psy7674 74 YEKELEKNKI--DYFNA-KAVFVD--KH----RVKF-AGEERTVSAQNFIIAVG--GRPTYPDIPGAH-----LGITSDD 136 (164)
Q Consensus 74 ~~~~l~~~gv--~~~~~-~~~~~~--~~----~v~v-~~~~~~~~~d~liiAtG--s~~~~p~i~g~~-----~v~~~~~ 136 (164)
++..+++.++ .+..+ +++.++ .. .+++ ++ +.+.||+||+||| ++|+.|++||.+ .+.+...
T Consensus 93 l~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~h~~~~ 170 (545)
T 3uox_A 93 VNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE--EVVTCRFLISATGPLSASRMPDIKGIDSFKGESFHSSRW 170 (545)
T ss_dssp HHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT--EEEEEEEEEECCCSCBC---CCCTTGGGCCSEEEEGGGC
T ss_pred HHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC--CEEEeCEEEECcCCCCCCcCCCCCCccccCCCeEEcccc
Confidence 3445566666 55544 444442 32 4544 45 6899999999999 899999999972 2334433
Q ss_pred hcc-------CcCCCCcEEEECCcHHHHHhhcccC
Q psy7674 137 LFS-------LNKDPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 137 ~~~-------~~~~~~~vvViGgG~~g~E~A~~l~ 164 (164)
... ....+++|+|||+|++|+|+|..|+
T Consensus 171 ~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la 205 (545)
T 3uox_A 171 PTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAA 205 (545)
T ss_dssp CBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHT
T ss_pred cccccccccccccCCCeEEEECCCccHHHHHHHHH
Confidence 333 3345789999999999999998764
No 69
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.97 E-value=8e-10 Score=90.00 Aligned_cols=84 Identities=24% Similarity=0.406 Sum_probs=60.0
Q ss_pred hcCceEEee-EEEEee--CcEEEe-C---CeeEEEEeceEEEecCCCCCCCCCCCc--ccee---chhhhccCc-----C
Q psy7674 80 KNKIDYFNA-KAVFVD--KHRVKF-A---GEERTVSAQNFIIAVGGRPTYPDIPGA--HLGI---TSDDLFSLN-----K 142 (164)
Q Consensus 80 ~~gv~~~~~-~~~~~~--~~~v~v-~---~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~---~~~~~~~~~-----~ 142 (164)
+.+++++.+ +++.++ .+.+.+ + +....+.||++++|||++|+.|++||. +.++ +.+++..+. .
T Consensus 78 ~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~ 157 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISAG 157 (472)
T ss_dssp ---CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCTT
T ss_pred hcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhcC
Confidence 478998765 666776 355555 2 433479999999999999999999986 3443 334444333 3
Q ss_pred CCCcEEEECCcHHHHHhhccc
Q psy7674 143 DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l 163 (164)
.+++++|||||++|+|+|..|
T Consensus 158 ~~~~vvViGgG~~g~e~A~~l 178 (472)
T 3iwa_A 158 EVSKAVIVGGGFIGLEMAVSL 178 (472)
T ss_dssp SCSEEEEECCSHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHH
Confidence 578999999999999999865
No 70
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.97 E-value=1.7e-09 Score=88.20 Aligned_cols=90 Identities=19% Similarity=0.198 Sum_probs=62.7
Q ss_pred hHHHHhhcCce--EEee-EEEEee--Cc----EEEe-C---CeeEEEEeceEEEecC--CCCCCCCCCCc-c---ceech
Q psy7674 74 YEKELEKNKID--YFNA-KAVFVD--KH----RVKF-A---GEERTVSAQNFIIAVG--GRPTYPDIPGA-H---LGITS 134 (164)
Q Consensus 74 ~~~~l~~~gv~--~~~~-~~~~~~--~~----~v~v-~---~~~~~~~~d~liiAtG--s~~~~p~i~g~-~---~v~~~ 134 (164)
+...+++.+++ +..+ +++.++ .. ++++ + +....+.||+||+||| ++|+.|++||. . .+.++
T Consensus 107 l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs 186 (464)
T 2xve_A 107 IKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHA 186 (464)
T ss_dssp HHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEG
T ss_pred HHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCccCCCCCcccCCceEEeh
Confidence 44555667887 6655 555553 22 4554 2 3225789999999999 89999999986 2 24444
Q ss_pred hhhccCc-CCCCcEEEECCcHHHHHhhccc
Q psy7674 135 DDLFSLN-KDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 135 ~~~~~~~-~~~~~vvViGgG~~g~E~A~~l 163 (164)
.+..... ..+++|+|||||++|+|+|..|
T Consensus 187 ~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l 216 (464)
T 2xve_A 187 HDFRDALEFKDKTVLLVGSSYSAEDIGSQC 216 (464)
T ss_dssp GGCCCGGGGTTSEEEEECCSTTHHHHHHHH
T ss_pred hhhCCHhHcCCCEEEEEcCCCCHHHHHHHH
Confidence 4444332 2579999999999999999876
No 71
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.96 E-value=2.2e-09 Score=83.23 Aligned_cols=90 Identities=17% Similarity=0.199 Sum_probs=62.2
Q ss_pred hhHHHHhhcCceEEee-EEEEee--CcEEE-e--CCeeEEEEeceEEEecC--CCCCCCCCCCc-c---ceechhhhccC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVD--KHRVK-F--AGEERTVSAQNFIIAVG--GRPTYPDIPGA-H---LGITSDDLFSL 140 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~--~~~v~-v--~~~~~~~~~d~liiAtG--s~~~~p~i~g~-~---~v~~~~~~~~~ 140 (164)
.+.+.+++.+++++.+ +++.++ .+.+. + ++ ..+.||++|+||| ++|..|++||. + ......+....
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~--g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 158 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDG--RQWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYSTP 158 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTS--CEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCCS
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCC--CEEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCCh
Confidence 3456667789999876 566654 34444 4 33 3799999999999 57778889886 2 12222222222
Q ss_pred -cCCCCcEEEECCcHHHHHhhcccC
Q psy7674 141 -NKDPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 141 -~~~~~~vvViGgG~~g~E~A~~l~ 164 (164)
...+++|+|||||++|+|+|..|+
T Consensus 159 ~~~~~~~v~VvG~G~~g~e~a~~l~ 183 (357)
T 4a9w_A 159 APFAGMRVAIIGGGNSGAQILAEVS 183 (357)
T ss_dssp GGGTTSEEEEECCSHHHHHHHHHHT
T ss_pred hhcCCCEEEEECCCcCHHHHHHHHH
Confidence 224689999999999999998764
No 72
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.96 E-value=3e-10 Score=92.56 Aligned_cols=86 Identities=22% Similarity=0.342 Sum_probs=61.2
Q ss_pred hhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCC-CCCCCCCCc--cceechhhhc-----------
Q psy7674 73 NYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGR-PTYPDIPGA--HLGITSDDLF----------- 138 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~-~~~p~i~g~--~~v~~~~~~~----------- 138 (164)
.+.+++++.+++++.+.. ++ +.++++. ..+.||+||+|||++ |+.|++||. +.++++.++.
T Consensus 66 ~~~~~~~~~~v~~~~~v~--v~-~~v~~~~--~~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~ 140 (456)
T 1lqt_A 66 QFEKTAEDPRFRFFGNVV--VG-EHVQPGE--LSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQ 140 (456)
T ss_dssp HHHHHHTSTTEEEEESCC--BT-TTBCHHH--HHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTT
T ss_pred HHHHHHhcCCCEEEeeEE--EC-CEEEECC--CeEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCccccc
Confidence 345667778999987622 32 3344422 247899999999997 688889986 4677665542
Q ss_pred cCcC-CCCcEEEECCcHHHHHhhccc
Q psy7674 139 SLNK-DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 139 ~~~~-~~~~vvViGgG~~g~E~A~~l 163 (164)
.+.. .+++|+|||+|++|+|+|..|
T Consensus 141 ~~~~~~~~~vvVIG~G~~g~e~A~~L 166 (456)
T 1lqt_A 141 VSPDLSGARAVVIGNGNVALDVARIL 166 (456)
T ss_dssp CCCCCCSSEEEEECCSHHHHHHHHHH
T ss_pred chhhcCCCEEEEECCCHHHHHHHHHH
Confidence 2222 468999999999999999865
No 73
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.92 E-value=2.8e-09 Score=88.74 Aligned_cols=88 Identities=16% Similarity=0.206 Sum_probs=60.7
Q ss_pred hHHHHhhcCc--eEEee-EEEEe--eCc----EEEe-CCeeEEEEeceEEEecC--CCCCCCCCCCcc----ceechhhh
Q psy7674 74 YEKELEKNKI--DYFNA-KAVFV--DKH----RVKF-AGEERTVSAQNFIIAVG--GRPTYPDIPGAH----LGITSDDL 137 (164)
Q Consensus 74 ~~~~l~~~gv--~~~~~-~~~~~--~~~----~v~v-~~~~~~~~~d~liiAtG--s~~~~p~i~g~~----~v~~~~~~ 137 (164)
+++.+++.++ .+..+ +++.+ +.. ++++ ++ +.+.||+||+||| ++|+.|++||.+ .++.....
T Consensus 105 l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G--~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~ 182 (549)
T 4ap3_A 105 LEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG--DEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVHTARW 182 (549)
T ss_dssp HHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC--CEEEEEEEEECCCSEEECCCCCCTTGGGCCSEEEEGGGC
T ss_pred HHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC--CEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEEeccc
Confidence 3455667777 66655 55555 333 4444 44 5799999999999 899999999972 12222222
Q ss_pred c--cCcCCCCcEEEECCcHHHHHhhccc
Q psy7674 138 F--SLNKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 138 ~--~~~~~~~~vvViGgG~~g~E~A~~l 163 (164)
. .....+++|+|||+|++|+|+|..|
T Consensus 183 ~~~~~~~~~krV~VIG~G~sgve~a~~l 210 (549)
T 4ap3_A 183 PHDGVDFTGKRVGVIGTGSSGIQSIPII 210 (549)
T ss_dssp CTTCCCCBTCEEEEECCSHHHHHHHHHH
T ss_pred cccccccCCCEEEEECCCchHHHHHHHH
Confidence 1 2233579999999999999999876
No 74
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.91 E-value=7.6e-10 Score=93.99 Aligned_cols=80 Identities=20% Similarity=0.230 Sum_probs=61.2
Q ss_pred hHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEE-EeceEEEecCCCCCCCCCCCc--cceechhhhccCc-CCCCcEEE
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTV-SAQNFIIAVGGRPTYPDIPGA--HLGITSDDLFSLN-KDPGKVLL 149 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~-~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~~~~-~~~~~vvV 149 (164)
+..++++.|++++.++. +. . ..+ .||+||+|||++|+.|++||. .++++..+.+... ..+++|+|
T Consensus 431 ~~~~~~~~gv~~~~~~~-------v~--~--~~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l~~~~~~~~~VvV 499 (671)
T 1ps9_A 431 YRRMIEVTGVTLKLNHT-------VT--A--DQLQAFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDKAPVGNKVAI 499 (671)
T ss_dssp HHHHHHHHTCEEEESCC-------CC--S--SSSCCSSEEEECCCEEECCCCCBTTTSTTEEEHHHHHTSCCCCCSEEEE
T ss_pred HHHHHHHcCCEEEeCcE-------ec--H--HHhhcCCEEEEccCCCcCCCCCCCCCCCcEeeHHHHhhCCCCCCCeEEE
Confidence 45667788999877542 11 1 124 899999999999999999986 4577776666543 35689999
Q ss_pred ECCcHHHHHhhcccC
Q psy7674 150 VGASYIALECAGCDK 164 (164)
Q Consensus 150 iGgG~~g~E~A~~l~ 164 (164)
||||++|+|+|..|+
T Consensus 500 IGgG~~g~E~A~~l~ 514 (671)
T 1ps9_A 500 IGCGGIGFDTAMYLS 514 (671)
T ss_dssp ECCHHHHHHHHHHHT
T ss_pred ECCChhHHHHHHHHH
Confidence 999999999998764
No 75
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.90 E-value=3.4e-09 Score=85.74 Aligned_cols=90 Identities=17% Similarity=0.046 Sum_probs=60.3
Q ss_pred HHHHhhcCceEEee-EEEEee--Cc--EEEe-C---Ce-eEEEEeceEEEecCC--CCCCCCCCCc-c-------ceech
Q psy7674 75 EKELEKNKIDYFNA-KAVFVD--KH--RVKF-A---GE-ERTVSAQNFIIAVGG--RPTYPDIPGA-H-------LGITS 134 (164)
Q Consensus 75 ~~~l~~~gv~~~~~-~~~~~~--~~--~v~v-~---~~-~~~~~~d~liiAtGs--~~~~p~i~g~-~-------~v~~~ 134 (164)
...+++.+..++.+ +++.++ .. ++++ + +. ...+.||+||+|||+ +|+.|++||. + .+.++
T Consensus 122 ~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~ 201 (447)
T 2gv8_A 122 RIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHS 201 (447)
T ss_dssp HHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEG
T ss_pred HHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEe
Confidence 34444456666555 455553 22 3444 3 42 237999999999998 8888899986 2 24555
Q ss_pred hhhccCcC-CCCcEEEECCcHHHHHhhcccC
Q psy7674 135 DDLFSLNK-DPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 135 ~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~ 164 (164)
.+...... .+++|+|||||++|+|+|..|+
T Consensus 202 ~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~ 232 (447)
T 2gv8_A 202 SLFREPELFVGESVLVVGGASSANDLVRHLT 232 (447)
T ss_dssp GGCCCGGGGTTCCEEEECSSHHHHHHHHHHT
T ss_pred cccCChhhcCCCEEEEEccCcCHHHHHHHHH
Confidence 55443332 4689999999999999998764
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.89 E-value=4.9e-09 Score=82.00 Aligned_cols=86 Identities=14% Similarity=0.246 Sum_probs=59.8
Q ss_pred hHHHHhhcCceEEee-EEEEeeCc----EEEeCCeeEEEEeceEEEecCCCCCCCCCCCccceechhhhccCcC-CCCcE
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVDKH----RVKFAGEERTVSAQNFIIAVGGRPTYPDIPGAHLGITSDDLFSLNK-DPGKV 147 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~~~----~v~v~~~~~~~~~d~liiAtGs~~~~p~i~g~~~v~~~~~~~~~~~-~~~~v 147 (164)
+...+++.|++++.+ .+..++.. .+..++ ..+.||++|+|||+.+. |.+|+ ..+.+..+...... ..++|
T Consensus 94 l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~--g~~~~d~vVlAtG~~~~-p~ip~-~~~~~~~~~~~~~~~~~~~v 169 (369)
T 3d1c_A 94 LQVVANHYELNIFENTVVTNISADDAYYTIATTT--ETYHADYIFVATGDYNF-PKKPF-KYGIHYSEIEDFDNFNKGQY 169 (369)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECSSSEEEEESS--CCEEEEEEEECCCSTTS-BCCCS-SSCEEGGGCSCGGGSCSSEE
T ss_pred HHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCC--CEEEeCEEEECCCCCCc-cCCCC-CceechhhcCChhhcCCCEE
Confidence 345567789999887 46656532 343333 25899999999999865 66776 44444444444333 34699
Q ss_pred EEECCcHHHHHhhccc
Q psy7674 148 LLVGASYIALECAGCD 163 (164)
Q Consensus 148 vViGgG~~g~E~A~~l 163 (164)
+|||||++|+|+|..|
T Consensus 170 vVvG~G~~g~e~a~~l 185 (369)
T 3d1c_A 170 VVIGGNESGFDAAYQL 185 (369)
T ss_dssp EEECCSHHHHHHHHHH
T ss_pred EEECCCcCHHHHHHHH
Confidence 9999999999999865
No 77
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.86 E-value=1.6e-10 Score=93.30 Aligned_cols=65 Identities=22% Similarity=0.282 Sum_probs=48.9
Q ss_pred hhHHHHhhcCceEEeeEEEEeeC--cEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc-cc---eechhhhccC
Q psy7674 73 NYEKELEKNKIDYFNAKAVFVDK--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA-HL---GITSDDLFSL 140 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~~~~~~~--~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~-~~---v~~~~~~~~~ 140 (164)
.+++++++.||+++.++++.+|+ ++|++ ++ +.+.||+||||||+++. +++||. ++ +.+.+++.++
T Consensus 61 ~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g--~~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~ 132 (430)
T 3hyw_A 61 PLAPLLPKFNIEFINEKAESIDPDANTVTTQSG--KKIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALET 132 (430)
T ss_dssp ESTTTGGGGTEEEECSCEEEEETTTTEEEETTC--CEEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHH
T ss_pred cHHHHHHHCCcEEEEeEEEEEECCCCEEEECCC--CEEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHH
Confidence 34567888899999999999984 56777 55 68999999999999864 568886 33 3455555443
No 78
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.83 E-value=3.4e-09 Score=85.78 Aligned_cols=87 Identities=16% Similarity=0.203 Sum_probs=55.9
Q ss_pred HHhhcCceEEeeE-EEEeeCc---------EEEe-CC--eeEEEEeceEEEecCCCCCCCC-CCCc--c-ceechhhhcc
Q psy7674 77 ELEKNKIDYFNAK-AVFVDKH---------RVKF-AG--EERTVSAQNFIIAVGGRPTYPD-IPGA--H-LGITSDDLFS 139 (164)
Q Consensus 77 ~l~~~gv~~~~~~-~~~~~~~---------~v~v-~~--~~~~~~~d~liiAtGs~~~~p~-i~g~--~-~v~~~~~~~~ 139 (164)
..++.++++..+. ++.++.. ++.. ++ ....+.||+||+|||++|.+|+ +++. . .++...+...
T Consensus 136 ~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~ 215 (463)
T 3s5w_A 136 VASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLE 215 (463)
T ss_dssp HHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHH
T ss_pred HHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCCCCCcchhhhcCCCCcEEECHHHHh
Confidence 3445678888774 6665422 3333 22 2227999999999999998887 3332 2 3443322211
Q ss_pred -CcC------CCCcEEEECCcHHHHHhhccc
Q psy7674 140 -LNK------DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 140 -~~~------~~~~vvViGgG~~g~E~A~~l 163 (164)
... .+++|+|||||++|+|+|..|
T Consensus 216 ~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l 246 (463)
T 3s5w_A 216 HMAKQPCSSGKPMKIAIIGGGQSAAEAFIDL 246 (463)
T ss_dssp HHCC-------CEEEEEECCSHHHHHHHHHH
T ss_pred hHHHhhhcccCCCeEEEECCCHhHHHHHHHH
Confidence 211 468999999999999999876
No 79
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.79 E-value=1.6e-09 Score=87.50 Aligned_cols=88 Identities=20% Similarity=0.297 Sum_probs=63.7
Q ss_pred hhHHHHhhcCceEEeeEEEEeeC--cEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc-c------ceechhhhccCcC
Q psy7674 73 NYEKELEKNKIDYFNAKAVFVDK--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA-H------LGITSDDLFSLNK 142 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~~~~~~~--~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~-~------~v~~~~~~~~~~~ 142 (164)
.+.+++++.|++++.++++.++. +++.+ ++ ..+.||+||+|||++|+.|++||. + .+.+.+++..+.+
T Consensus 64 ~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g--~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~ 141 (437)
T 3sx6_A 64 PIRHYVERKGIHFIAQSAEQIDAEAQNITLADG--NTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFA 141 (437)
T ss_dssp ECHHHHHTTTCEEECSCEEEEETTTTEEEETTS--CEEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCC--CEEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHH
Confidence 45678888999999988888875 46666 44 579999999999999999889886 2 2345555544321
Q ss_pred ------CCCcEEEECCc----HHH--HHhhcc
Q psy7674 143 ------DPGKVLLVGAS----YIA--LECAGC 162 (164)
Q Consensus 143 ------~~~~vvViGgG----~~g--~E~A~~ 162 (164)
..++++||||| ++| +|+|..
T Consensus 142 ~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~ 173 (437)
T 3sx6_A 142 EYQALLREPGPIVIGAMAGASCFGPAYEYAMI 173 (437)
T ss_dssp HHHHHHHSCCCEEEEECTTCCCCHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHH
Confidence 13456788884 445 888854
No 80
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.78 E-value=2.3e-08 Score=76.82 Aligned_cols=88 Identities=18% Similarity=0.160 Sum_probs=61.4
Q ss_pred hhHHHHhhcCceEEee-EEEEeeC--c---EEEeCCeeEEEEeceEEEecCC---CCCCCCCCCccc-----eechhhhc
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVDK--H---RVKFAGEERTVSAQNFIIAVGG---RPTYPDIPGAHL-----GITSDDLF 138 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~~--~---~v~v~~~~~~~~~d~liiAtGs---~~~~p~i~g~~~-----v~~~~~~~ 138 (164)
.+.+.+++.+++++.+ ++..++. + .+.+++ ..+.||++|+|||+ +|+.|++||.+. +.. ...
T Consensus 72 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~--g~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~--~~~ 147 (332)
T 3lzw_A 72 NLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNE--ETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY--FVD 147 (332)
T ss_dssp HHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESS--EEEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES--SCS
T ss_pred HHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECC--CEEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE--ecC
Confidence 4556677789999864 6666642 2 344443 24999999999999 888888988621 222 222
Q ss_pred cCcC-CCCcEEEECCcHHHHHhhcccC
Q psy7674 139 SLNK-DPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 139 ~~~~-~~~~vvViGgG~~g~E~A~~l~ 164 (164)
.... .+++++|||+|++|+|+|..|+
T Consensus 148 ~~~~~~~~~v~vvG~g~~~~e~a~~l~ 174 (332)
T 3lzw_A 148 DLQKFAGRRVAILGGGDSAVDWALMLE 174 (332)
T ss_dssp CGGGGBTCEEEEECSSHHHHHHHHHHT
T ss_pred CHHHcCCCEEEEECCCHhHHHHHHHHH
Confidence 2222 3689999999999999998763
No 81
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=98.77 E-value=2.4e-09 Score=71.76 Aligned_cols=70 Identities=10% Similarity=0.251 Sum_probs=52.9
Q ss_pred ccccCCCCC-ccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecCCceEEEeccCCcccccccchhhHHHHhhc
Q psy7674 3 DIQTAPPDY-NFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNNSVVIFSKSWCPFCTKAKENNYEKELEKN 81 (164)
Q Consensus 3 ~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~ 81 (164)
+-||++.++ +|..++++.+ .++|++|.+.+|++|||+|||+|+|||+.+.++ .-..+..+..+|++.
T Consensus 42 k~lL~~~gv~~~~~~~v~~~---~~~r~~l~~~sg~~TvPqIFI~g~~IGG~Ddl~---------~l~~~GeL~~lL~~~ 109 (118)
T 2wul_A 42 VQILRLHGVRDYAAYNVLDD---PELRQGIKDYSNWPTIPQVYLNGEFVGGCDILL---------QMHQNGDLVEELKKL 109 (118)
T ss_dssp HHHHHHTTCCSCEEEETTSC---HHHHHHHHHHHTCCSSCEEEETTEEEECHHHHH---------HHHHHTHHHHHHHHT
T ss_pred HHHHHHhCCcCeEeecccCC---HHHHHHHHHhccCCCCCeEeECCEEECCHHHHH---------HHHHCCCHHHHHHHc
Confidence 446777887 5898888776 789999999999999999999999999655331 001233466777877
Q ss_pred Cce
Q psy7674 82 KID 84 (164)
Q Consensus 82 gv~ 84 (164)
|+.
T Consensus 110 Gi~ 112 (118)
T 2wul_A 110 GIH 112 (118)
T ss_dssp TCC
T ss_pred CCc
Confidence 765
No 82
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.73 E-value=4.7e-08 Score=75.48 Aligned_cols=88 Identities=22% Similarity=0.186 Sum_probs=59.1
Q ss_pred hhHHHHhhcCceEEee-EEEEeeC--cE--EEe-CCeeEEEEeceEEEecCC---CCCCCCCCCccc-----eechhhhc
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVDK--HR--VKF-AGEERTVSAQNFIIAVGG---RPTYPDIPGAHL-----GITSDDLF 138 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~~--~~--v~v-~~~~~~~~~d~liiAtGs---~~~~p~i~g~~~-----v~~~~~~~ 138 (164)
.+.+.+++.+++++.+ ++..++. .. +.. ++ ..+.||++|+|||+ .|..|+++|.+. +..+ +.
T Consensus 70 ~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~--~~ 145 (335)
T 2zbw_A 70 GLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQG--NAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYA--VK 145 (335)
T ss_dssp HHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTS--CEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESS--CS
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCC--CEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEe--cC
Confidence 3455667778988765 5666542 23 333 33 57999999999999 577778887521 2111 11
Q ss_pred cCc-CCCCcEEEECCcHHHHHhhcccC
Q psy7674 139 SLN-KDPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 139 ~~~-~~~~~vvViGgG~~g~E~A~~l~ 164 (164)
... ..+++++|||||++|+|+|..|+
T Consensus 146 ~~~~~~~~~v~viG~G~~g~e~a~~l~ 172 (335)
T 2zbw_A 146 SKAEFQGKRVLIVGGGDSAVDWALNLL 172 (335)
T ss_dssp CGGGGTTCEEEEECSSHHHHHHHHHTT
T ss_pred chhhcCCCEEEEECCCHHHHHHHHHHH
Confidence 111 14689999999999999998774
No 83
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.67 E-value=4.4e-09 Score=85.70 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=67.4
Q ss_pred CCceEEEeccCCc-----cccc----cc--chhhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCC-
Q psy7674 52 NNSVVIFSKSWCP-----FCTK----AK--ENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGR- 119 (164)
Q Consensus 52 ~d~vvv~~~~~cp-----~~~~----~~--~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~- 119 (164)
+..+++|.+...+ |..+ .+ .....+++++.|++++.++.+. +.++++. ..+.||++++|||+.
T Consensus 145 G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---~~v~~~~--~~~~~d~vvlAtG~~~ 219 (456)
T 2vdc_G 145 GYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG---RDASLPE--LRRKHVAVLVATGVYK 219 (456)
T ss_dssp TCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT---TTBCHHH--HHSSCSEEEECCCCCE
T ss_pred CCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec---cEEEhhH--hHhhCCEEEEecCCCC
Confidence 5578888875321 1111 11 1234467788899998765321 1233322 235799999999996
Q ss_pred CCCCCCCCc--cceechhhhc--------c----------CcCCCCcEEEECCcHHHHHhhccc
Q psy7674 120 PTYPDIPGA--HLGITSDDLF--------S----------LNKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 120 ~~~p~i~g~--~~v~~~~~~~--------~----------~~~~~~~vvViGgG~~g~E~A~~l 163 (164)
|+.|++||. +.+++..+.+ . ....+++|+|||||++|+|+|..+
T Consensus 220 ~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~ 283 (456)
T 2vdc_G 220 ARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTA 283 (456)
T ss_dssp ECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHH
T ss_pred CCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHH
Confidence 677889986 4565432221 1 113468999999999999999754
No 84
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=98.64 E-value=1e-08 Score=69.65 Aligned_cols=52 Identities=29% Similarity=0.378 Sum_probs=44.7
Q ss_pred ccccCC---CCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecCCc
Q psy7674 3 DIQTAP---PDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNNS 54 (164)
Q Consensus 3 ~~~~~~---~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d~ 54 (164)
+.+|++ .++.|++++||.++++.++|++|.+.+|++|||++||+|++||+.+
T Consensus 31 k~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI~G~~IGG~d 85 (127)
T 3l4n_A 31 KELLENEYQFIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLVNGVSRGGNE 85 (127)
T ss_dssp HHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETTEECCCHH
T ss_pred HHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEECCEEEcCHH
Confidence 344554 3688999999999999999999999999999999999999998544
No 85
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.63 E-value=1.3e-07 Score=74.00 Aligned_cols=88 Identities=17% Similarity=0.124 Sum_probs=59.0
Q ss_pred hhHHHHhhcCceEEee-EEEEeeC--c---EEEe-CCeeEEEEeceEEEecCC---CCCCCCCCC-c-c----ceech-h
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVDK--H---RVKF-AGEERTVSAQNFIIAVGG---RPTYPDIPG-A-H----LGITS-D 135 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~~--~---~v~v-~~~~~~~~~d~liiAtGs---~~~~p~i~g-~-~----~v~~~-~ 135 (164)
.+.+.+++.+++++.+ ++..++. + .+.+ ++ ..+.||++|+|||+ .|..|+++| . . .+..+ .
T Consensus 79 ~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g--~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~ 156 (360)
T 3ab1_A 79 SLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTG--NVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVK 156 (360)
T ss_dssp HHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTS--CEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCS
T ss_pred HHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCC--cEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecC
Confidence 3455667778998776 5666642 2 3444 34 57999999999999 566677887 4 2 12221 1
Q ss_pred hhccCcCCCCcEEEECCcHHHHHhhcccC
Q psy7674 136 DLFSLNKDPGKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 136 ~~~~~~~~~~~vvViGgG~~g~E~A~~l~ 164 (164)
+... ..+++++|||+|++|+|+|..|+
T Consensus 157 ~~~~--~~~~~vvVvG~G~~g~e~A~~l~ 183 (360)
T 3ab1_A 157 SVED--FKGKRVVIVGGGDSALDWTVGLI 183 (360)
T ss_dssp CGGG--GTTCEEEEECSSHHHHHHHHHTT
T ss_pred CHHH--cCCCcEEEECCCHHHHHHHHHHH
Confidence 1111 14689999999999999998763
No 86
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=98.62 E-value=2e-08 Score=66.69 Aligned_cols=53 Identities=38% Similarity=0.531 Sum_probs=47.6
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecCCc
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNNS 54 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d~ 54 (164)
++.+|++.+++|++++||..+++.+++++|.+.+|.+++|++||+|+++|+.+
T Consensus 33 ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi~g~~igG~d 85 (114)
T 3h8q_A 33 VKELFSSLGVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFVNKVHVGGCD 85 (114)
T ss_dssp HHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEETTEEEESHH
T ss_pred HHHHHHHcCCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEECCEEEeCHH
Confidence 45678889999999999999889999999999999999999999999988544
No 87
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.62 E-value=3.1e-08 Score=87.32 Aligned_cols=88 Identities=8% Similarity=-0.003 Sum_probs=60.2
Q ss_pred HHHhhc-CceEEee-EEEEeeCc-EE----------EeC-------CeeEEEEeceEEEecCCCCCCCCCCCc--cceec
Q psy7674 76 KELEKN-KIDYFNA-KAVFVDKH-RV----------KFA-------GEERTVSAQNFIIAVGGRPTYPDIPGA--HLGIT 133 (164)
Q Consensus 76 ~~l~~~-gv~~~~~-~~~~~~~~-~v----------~v~-------~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~ 133 (164)
+.+.+. +++++.+ ++..++.. .+ .+. +....+.||+||+|||++|+.|++||. +.+++
T Consensus 189 ~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~ 268 (965)
T 2gag_A 189 SELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIML 268 (965)
T ss_dssp HHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEE
T ss_pred HHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEE
Confidence 445554 8999877 44445421 11 110 222468999999999999999999986 56776
Q ss_pred hhhh---cc-CcC-CCCcEEEECCcHHHHHhhccc
Q psy7674 134 SDDL---FS-LNK-DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 134 ~~~~---~~-~~~-~~~~vvViGgG~~g~E~A~~l 163 (164)
+.++ +. ... ..++++|||||++|+|+|..|
T Consensus 269 ~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L 303 (965)
T 2gag_A 269 AGAVRSYLNRYGVRAGARIAVATTNDSAYELVREL 303 (965)
T ss_dssp HHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHH
T ss_pred hHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHH
Confidence 6443 22 122 248999999999999999876
No 88
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.57 E-value=8.6e-09 Score=91.36 Aligned_cols=86 Identities=21% Similarity=0.308 Sum_probs=58.9
Q ss_pred HHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCC-CCCCCCC-CCc---cceechhhhcc----------
Q psy7674 75 EKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGG-RPTYPDI-PGA---HLGITSDDLFS---------- 139 (164)
Q Consensus 75 ~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs-~~~~p~i-~g~---~~v~~~~~~~~---------- 139 (164)
.+++++.||+++.++.+. .+.+++++ ...+.||++++|||+ +|+.+++ +|. +++++..+.+.
T Consensus 245 ~~~~~~~gv~~~~~~~v~--~~~v~~~~-~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~ 321 (1025)
T 1gte_A 245 IELMKDLGVKIICGKSLS--ENEITLNT-LKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGM 321 (1025)
T ss_dssp HHHHHTTTCEEEESCCBS--TTSBCHHH-HHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTT
T ss_pred HHHHHHCCcEEEcccEec--cceEEhhh-cCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhccccc
Confidence 356788899998875432 12344422 134789999999999 5887764 443 45776555432
Q ss_pred ------CcCCCCcEEEECCcHHHHHhhccc
Q psy7674 140 ------LNKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 140 ------~~~~~~~vvViGgG~~g~E~A~~l 163 (164)
+...+++|+|||||++|+|+|..+
T Consensus 322 ~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~ 351 (1025)
T 1gte_A 322 CACHSPLPSIRGAVIVLGAGDTAFDCATSA 351 (1025)
T ss_dssp BSCCCCCCCCCSEEEEECSSHHHHHHHHHH
T ss_pred ccccccccccCCcEEEECCChHHHHHHHHH
Confidence 123457999999999999999765
No 89
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.54 E-value=5.3e-08 Score=77.68 Aligned_cols=82 Identities=12% Similarity=0.143 Sum_probs=57.9
Q ss_pred hhhHHHHhhcCceEEeeEEEEeeC--cEEEe-CC--eeEEEEeceEEEecCCCCCCCCCCCc-c---ceechhhhccCcC
Q psy7674 72 NNYEKELEKNKIDYFNAKAVFVDK--HRVKF-AG--EERTVSAQNFIIAVGGRPTYPDIPGA-H---LGITSDDLFSLNK 142 (164)
Q Consensus 72 ~~~~~~l~~~gv~~~~~~~~~~~~--~~v~v-~~--~~~~~~~d~liiAtGs~~~~p~i~g~-~---~v~~~~~~~~~~~ 142 (164)
..+.+.+++.+++++.++++.++. +.+.+ ++ ....+.||+||+|||++|+.|++||. + .+.+.++...+.+
T Consensus 60 ~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~ 139 (409)
T 3h8l_A 60 VDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLRE 139 (409)
T ss_dssp EEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHH
T ss_pred HHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHH
Confidence 346677888999999998888864 46666 33 12358999999999999999889986 3 2334444433322
Q ss_pred ----CCCcEEEECCc
Q psy7674 143 ----DPGKVLLVGAS 153 (164)
Q Consensus 143 ----~~~~vvViGgG 153 (164)
..++++|||+|
T Consensus 140 ~l~~~~~~~vViG~G 154 (409)
T 3h8l_A 140 KLESFQGGNIAIGSG 154 (409)
T ss_dssp HHHHCCSEEEEEEEC
T ss_pred HHHHhcCCeEEEEec
Confidence 23567799999
No 90
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.46 E-value=5.8e-07 Score=74.47 Aligned_cols=59 Identities=19% Similarity=0.263 Sum_probs=43.8
Q ss_pred EEEEeceEEEecC--CCCCCCCCCCcc---c--eechhhhcc-CcCCCCcEEEECCcHHHHHhhccc
Q psy7674 105 RTVSAQNFIIAVG--GRPTYPDIPGAH---L--GITSDDLFS-LNKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 105 ~~~~~d~liiAtG--s~~~~p~i~g~~---~--v~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l 163 (164)
+.+.+|+||+||| ++|+.|.+||.+ . +.+..-... ....+++|+|||+|++|+|+|..|
T Consensus 139 ~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l 205 (542)
T 1w4x_A 139 DRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQI 205 (542)
T ss_dssp CEEEEEEEEECCCSCCCCCCCCCTTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHH
T ss_pred CEEEeCEEEECcCCCCCCCCCCCCCcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHH
Confidence 5799999999999 678888899862 1 333322111 233579999999999999998765
No 91
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=98.44 E-value=1.1e-07 Score=63.00 Aligned_cols=50 Identities=12% Similarity=0.193 Sum_probs=43.5
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecCCc
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNNS 54 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d~ 54 (164)
++.+|++.+++|+.++|+.+ ++.++.|.+.+|++++|++||+|++||+.+
T Consensus 37 ak~~L~~~gi~y~~~di~~d---~~~~~~l~~~~g~~tvP~ifi~g~~iGG~d 86 (111)
T 3zyw_A 37 MVEILHKHNIQFSSFDIFSD---EEVRQGLKAYSSWPTYPQLYVSGELIGGLD 86 (111)
T ss_dssp HHHHHHHTTCCCEEEEGGGC---HHHHHHHHHHHTCCSSCEEEETTEEEECHH
T ss_pred HHHHHHHcCCCeEEEECcCC---HHHHHHHHHHHCCCCCCEEEECCEEEecHH
Confidence 34578889999999999886 788999999999999999999999998544
No 92
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=98.44 E-value=1.1e-07 Score=62.65 Aligned_cols=50 Identities=18% Similarity=0.224 Sum_probs=43.7
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecCCc
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNNS 54 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d~ 54 (164)
++.+|++.+++|+.++|+.+ .+.++.|.+++|++++|++||+|++||+.+
T Consensus 39 ak~~L~~~gi~~~~~dI~~~---~~~~~~l~~~~g~~tvP~ifi~g~~iGG~d 88 (109)
T 3ipz_A 39 VVQILKNLNVPFEDVNILEN---EMLRQGLKEYSNWPTFPQLYIGGEFFGGCD 88 (109)
T ss_dssp HHHHHHHTTCCCEEEEGGGC---HHHHHHHHHHHTCSSSCEEEETTEEEECHH
T ss_pred HHHHHHHcCCCcEEEECCCC---HHHHHHHHHHHCCCCCCeEEECCEEEeCHH
Confidence 35578889999999999876 788999999999999999999999998544
No 93
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.42 E-value=2.9e-08 Score=79.82 Aligned_cols=87 Identities=21% Similarity=0.220 Sum_probs=59.5
Q ss_pred hHHHHhhcCceEEeeEEEEeeC--cEEEe-CCeeEEEEeceEEEecCCCCCCCCCCC--c-cceechhhhccCcC-----
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDK--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPG--A-HLGITSDDLFSLNK----- 142 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~--~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g--~-~~v~~~~~~~~~~~----- 142 (164)
+.+++++.|++++.++++.+++ +++.+ ++ ..+.||++|+|||++|..|.+.. . ..+.+.+++..+.+
T Consensus 62 ~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g--~~i~~d~liiAtG~~~~~pg~~~~g~~~~~~~~~~a~~~~~~~~~~ 139 (430)
T 3h28_A 62 LAPLLPKFNIEFINEKAESIDPDANTVTTQSG--KKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQEL 139 (430)
T ss_dssp STTTGGGGTEEEECSCEEEEETTTTEEEETTC--CEEECSEEEECCCCEEECCSBTHHHHSCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEEEEEEEEECCCCEEEECCC--cEEECCEEEEcCCcccccCCCCCcCCccCcCCHHHHHHHHHHHHHH
Confidence 4466778899999988888875 45666 44 57999999999999988775431 1 23455555544321
Q ss_pred -CCCcEEEECCcHH----H--HHhhcc
Q psy7674 143 -DPGKVLLVGASYI----A--LECAGC 162 (164)
Q Consensus 143 -~~~~vvViGgG~~----g--~E~A~~ 162 (164)
..++++|||+|.. | +|+|..
T Consensus 140 ~~~~~~vVVGgG~~~~~~G~~~E~a~~ 166 (430)
T 3h28_A 140 YANPGPVVIGAIPGVSCFGPAYEFALM 166 (430)
T ss_dssp HHSCCCEEEEECTTCCCCHHHHHHHHH
T ss_pred HhcCCeEEEEcCCCCCcCcHHHHHHHH
Confidence 1345678888654 4 888854
No 94
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=98.42 E-value=1e-07 Score=64.03 Aligned_cols=47 Identities=15% Similarity=0.097 Sum_probs=40.8
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhc--------CCCCcceEEeeceEec
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERT--------GQKTVPNIFIHGKHID 51 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--------g~~~vp~v~i~~~~ig 51 (164)
++.||+++++.|+.++|+.+ ++.++.|.+.+ |++++|+|||+++++|
T Consensus 22 aK~lL~~kgV~feEidI~~d---~~~r~eM~~~~~~~~~~~~G~~tvPQIFi~~~~iG 76 (121)
T 1u6t_A 22 VLGFLEANKIGFEEKDIAAN---EENRKWMRENVPENSRPATGYPLPPQIFNESQYRG 76 (121)
T ss_dssp HHHHHHHTTCCEEEEECTTC---HHHHHHHHHHSCGGGSCSSSSCCSCEEEETTEEEE
T ss_pred HHHHHHHCCCceEEEECCCC---HHHHHHHHHhccccccccCCCcCCCEEEECCEEEe
Confidence 56789999999999999876 66667777677 9999999999999998
No 95
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=98.41 E-value=2.3e-07 Score=63.00 Aligned_cols=51 Identities=47% Similarity=0.684 Sum_probs=46.2
Q ss_pred ccccCCCC---CccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecCC
Q psy7674 3 DIQTAPPD---YNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNN 53 (164)
Q Consensus 3 ~~~~~~~~---~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d 53 (164)
+.+|++.+ ++|++++||..+++.+.++.|.+.+|.+++|++|++|+++|+-
T Consensus 55 k~~L~~~~~~~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~vfi~g~~igG~ 108 (129)
T 3ctg_A 55 STLFQELNVPKSKALVLELDEMSNGSEIQDALEEISGQKTVPNVYINGKHIGGN 108 (129)
T ss_dssp HHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETTEEEESH
T ss_pred HHHHHhcCccCCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEEEECCEEEcCH
Confidence 67888899 9999999999988889999999999999999999999988743
No 96
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=98.40 E-value=1.6e-07 Score=62.93 Aligned_cols=50 Identities=8% Similarity=0.213 Sum_probs=43.0
Q ss_pred cccccCCCCCc-cEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecCCc
Q psy7674 2 VDIQTAPPDYN-FQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNNS 54 (164)
Q Consensus 2 ~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d~ 54 (164)
++-+|++.+++ |+.++|+.+ ++.++.|.+.+|++++|++||+|++||+.+
T Consensus 41 ak~lL~~~gv~~~~~vdV~~d---~~~~~~l~~~tg~~tvP~vfI~g~~IGG~d 91 (118)
T 2wem_A 41 VVQILRLHGVRDYAAYNVLDD---PELRQGIKDYSNWPTIPQVYLNGEFVGGCD 91 (118)
T ss_dssp HHHHHHHTTCCCCEEEESSSC---HHHHHHHHHHHTCCSSCEEEETTEEEESHH
T ss_pred HHHHHHHcCCCCCEEEEcCCC---HHHHHHHHHHhCCCCcCeEEECCEEEeChH
Confidence 34578888995 999999876 788999999999999999999999999544
No 97
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.38 E-value=9.8e-09 Score=85.96 Aligned_cols=95 Identities=20% Similarity=0.313 Sum_probs=61.0
Q ss_pred CCceEEEeccCCcccccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeE-EEEeceEEEecCCCCCCCCC--CCc
Q psy7674 52 NNSVVIFSKSWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEER-TVSAQNFIIAVGGRPTYPDI--PGA 128 (164)
Q Consensus 52 ~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~-~~~~d~liiAtGs~~~~p~i--~g~ 128 (164)
...+++|+++|||||...+ ++|++.++++ +.+.++.... ....+.+..-+|. +.+|.+ .|
T Consensus 17 ~~~v~vy~~~~Cp~C~~~k-----~~L~~~~i~~----------~~~dv~~~~~~~~~~~~l~~~~g~-~tvP~v~i~g- 79 (598)
T 2x8g_A 17 SAAVILFSKTTCPYCKKVK-----DVLAEAKIKH----------ATIELDQLSNGSAIQKCLASFSKI-ETVPQMFVRG- 79 (598)
T ss_dssp HCSEEEEECTTCHHHHHHH-----HHHHHTTCCC----------EEEEGGGSTTHHHHHHHTHHHHSC-CCSCEEEETT-
T ss_pred cCCEEEEECCCChhHHHHH-----HHHHHCCCCc----------EEEEcccCcchHHHHHHHHHHhCC-ceeCEEEECC-
Confidence 3578999999999999999 8899999987 2344421000 0011222222553 356663 44
Q ss_pred cceechhhhccCc------------CCCCcEEEECCcHHHHHhhccc
Q psy7674 129 HLGITSDDLFSLN------------KDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 129 ~~v~~~~~~~~~~------------~~~~~vvViGgG~~g~E~A~~l 163 (164)
+++..++++..+. ....+|+|||||+.|+.+|..|
T Consensus 80 ~~igG~~~l~~~~~~g~L~~~l~~~~~~~dvvVIG~GpAGl~aA~~l 126 (598)
T 2x8g_A 80 KFIGDSQTVLKYYSNDELAGIVNESKYDYDLIVIGGGSGGLAAGKEA 126 (598)
T ss_dssp EEEECHHHHHHHHHTTCHHHHHHCCSSSEEEEEECCSHHHHHHHHHH
T ss_pred EEEEeeehhhhhhhcCcchhhcccccccccEEEECCCccHHHHHHHH
Confidence 6777776543221 1235799999999999999765
No 98
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.37 E-value=4.5e-07 Score=74.35 Aligned_cols=79 Identities=11% Similarity=0.012 Sum_probs=54.9
Q ss_pred hcCceEEee-EEEEee--CcEEEe----CCeeEEEEeceEEEecCCCCCCCCCCCc--cceechhhhccC-----cCCCC
Q psy7674 80 KNKIDYFNA-KAVFVD--KHRVKF----AGEERTVSAQNFIIAVGGRPTYPDIPGA--HLGITSDDLFSL-----NKDPG 145 (164)
Q Consensus 80 ~~gv~~~~~-~~~~~~--~~~v~v----~~~~~~~~~d~liiAtGs~~~~p~i~g~--~~v~~~~~~~~~-----~~~~~ 145 (164)
+.+++++.+ ++..++ .+.+.+ ++....+.||++++|||++|+.|++||. ..+++.+++..+ ...++
T Consensus 172 ~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~ 251 (493)
T 1y56_A 172 NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTMLFENNDMPGVFRRDFALEVMNVWEVAPGR 251 (493)
T ss_dssp CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCCCTTTTSTTEEEHHHHHHHHHTSCBCSCS
T ss_pred hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCCCCCCCCCCEEEcHHHHHHHHhcccCCCC
Confidence 458888765 344443 222222 2322368999999999999999999986 567776665432 12348
Q ss_pred cEEEECCcHHHHH
Q psy7674 146 KVLLVGASYIALE 158 (164)
Q Consensus 146 ~vvViGgG~~g~E 158 (164)
+++|||+|++|+|
T Consensus 252 ~vvViGgG~~gle 264 (493)
T 1y56_A 252 KVAVTGSKADEVI 264 (493)
T ss_dssp EEEEESTTHHHHH
T ss_pred EEEEECCCHHHHH
Confidence 9999999999997
No 99
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=98.35 E-value=1.7e-07 Score=62.96 Aligned_cols=72 Identities=13% Similarity=0.182 Sum_probs=51.3
Q ss_pred cccccCCCCCc---cEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecCCceEEEeccCCcccccccchhhHHHH
Q psy7674 2 VDIQTAPPDYN---FQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNNSVVIFSKSWCPFCTKAKENNYEKEL 78 (164)
Q Consensus 2 ~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d~vvv~~~~~cp~~~~~~~~~~~~~l 78 (164)
++-+|++.++. |..++|+.+ .++++.|.+.+|++++|++||+|++||+.+.+. ....+..+..+|
T Consensus 37 ak~lL~~~gv~~~~~~~~dv~~~---~~~~~~l~~~sg~~tvP~vfI~g~~iGG~d~l~---------~l~~~G~L~~~L 104 (121)
T 3gx8_A 37 TIGLLGNQGVDPAKFAAYNVLED---PELREGIKEFSEWPTIPQLYVNKEFIGGCDVIT---------SMARSGELADLL 104 (121)
T ss_dssp HHHHHHHHTBCGGGEEEEECTTC---HHHHHHHHHHHTCCSSCEEEETTEEEESHHHHH---------HHHHHTHHHHHH
T ss_pred HHHHHHHcCCCcceEEEEEecCC---HHHHHHHHHHhCCCCCCeEEECCEEEecHHHHH---------HHHHcCChHHHH
Confidence 34567778888 677777654 889999999999999999999999999554321 001233456677
Q ss_pred hhcCceE
Q psy7674 79 EKNKIDY 85 (164)
Q Consensus 79 ~~~gv~~ 85 (164)
++.|+-.
T Consensus 105 ~~~g~~~ 111 (121)
T 3gx8_A 105 EEAQALV 111 (121)
T ss_dssp HHTTCBC
T ss_pred HHcCCCC
Confidence 7777643
No 100
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.31 E-value=5.7e-07 Score=60.00 Aligned_cols=50 Identities=42% Similarity=0.692 Sum_probs=45.4
Q ss_pred ccccCCCC---CccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecC
Q psy7674 3 DIQTAPPD---YNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDN 52 (164)
Q Consensus 3 ~~~~~~~~---~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~ 52 (164)
+.+|++.+ ++|..++||..+++.+.++.|.+.+|.+++|++|++|+++++
T Consensus 43 k~~L~~~~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~vfi~g~~igG 95 (118)
T 3c1r_A 43 NTLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYINGKHIGG 95 (118)
T ss_dssp HHHHTTSCCCGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETTEEEES
T ss_pred HHHHHHcCCCCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEEEECCEEEEc
Confidence 67888888 999999999998888999999999999999999999997774
No 101
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.31 E-value=2.1e-07 Score=79.78 Aligned_cols=59 Identities=27% Similarity=0.313 Sum_probs=46.9
Q ss_pred EEEEeceEEEecCCC--------CCCCCCCCcc----ceechhhhccCcC-CCCcEEEEC--CcHHHHHhhccc
Q psy7674 105 RTVSAQNFIIAVGGR--------PTYPDIPGAH----LGITSDDLFSLNK-DPGKVLLVG--ASYIALECAGCD 163 (164)
Q Consensus 105 ~~~~~d~liiAtGs~--------~~~p~i~g~~----~v~~~~~~~~~~~-~~~~vvViG--gG~~g~E~A~~l 163 (164)
..+.||+||+|||++ |+.|++||.+ ++++..+++.... ..++|+||| ||++|+|+|..|
T Consensus 476 ~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l 549 (729)
T 1o94_A 476 LQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKL 549 (729)
T ss_dssp HTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHH
T ss_pred cccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHH
Confidence 357899999999998 4567788853 6788777765433 357999998 999999999876
No 102
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=98.30 E-value=4.9e-07 Score=61.89 Aligned_cols=50 Identities=16% Similarity=0.227 Sum_probs=43.6
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecCCc
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNNS 54 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d~ 54 (164)
++.+|++.+++|..++|+.+ ++.++.|.+++|.+++|++||+|++||+-+
T Consensus 56 ak~~L~~~gv~y~~vdI~~d---~~~~~~L~~~~G~~tvP~VfI~G~~iGG~d 105 (135)
T 2wci_A 56 AVQALAACGERFAYVDILQN---PDIRAELPKYANWPTFPQLWVDGELVGGCD 105 (135)
T ss_dssp HHHHHHTTCSCCEEEEGGGC---HHHHHHHHHHHTCCSSCEEEETTEEEESHH
T ss_pred HHHHHHHcCCceEEEECCCC---HHHHHHHHHHHCCCCcCEEEECCEEEEChH
Confidence 45678899999999999987 778899999999999999999999888543
No 103
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=98.29 E-value=3.4e-07 Score=60.39 Aligned_cols=53 Identities=45% Similarity=0.619 Sum_probs=45.6
Q ss_pred cccccCCCCCccEEEEecCC-CChhHHHHHHHhhcCCCCcceEEeeceEecCCc
Q psy7674 2 VDIQTAPPDYNFQVVELDKL-PNGAQIQTALFERTGQKTVPNIFIHGKHIDNNS 54 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d~ 54 (164)
++.+|++.++.|.+++|+.. ++..++++.+.+.+|.+++|++|++|++||+-+
T Consensus 35 ~~~~L~~~~i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~ifi~g~~igG~~ 88 (113)
T 3rhb_A 35 VKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFVCGKHIGGCT 88 (113)
T ss_dssp HHHHHHHTTCCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEEETTEEEESHH
T ss_pred HHHHHHHcCCCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEEECCEEEcCcH
Confidence 45678899999999999986 456888999999999999999999999888443
No 104
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=98.29 E-value=3.2e-07 Score=57.73 Aligned_cols=51 Identities=18% Similarity=0.330 Sum_probs=42.6
Q ss_pred cccccCCCCCccEEEEecCCC--ChhHHHHHHHhhcCCC-----CcceEEe-eceEecC
Q psy7674 2 VDIQTAPPDYNFQVVELDKLP--NGAQIQTALFERTGQK-----TVPNIFI-HGKHIDN 52 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~l~~~~g~~-----~vp~v~i-~~~~ig~ 52 (164)
++.+|++.+++|++++|+..+ +.++.++.|.+++|.+ ++|++|+ +|+++|+
T Consensus 20 ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~~igG 78 (87)
T 1aba_A 20 AKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGG 78 (87)
T ss_dssp HHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEES
T ss_pred HHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCEEEeC
Confidence 356788899999999998543 3478888898889999 9999999 9998874
No 105
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=98.28 E-value=4.4e-07 Score=57.86 Aligned_cols=48 Identities=15% Similarity=0.209 Sum_probs=41.0
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcC--CCCcceEEeeceEecC
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTG--QKTVPNIFIHGKHIDN 52 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g--~~~vp~v~i~~~~ig~ 52 (164)
++.+|++.++.|+.++|+.+ .+.++.|.+++| .+++|++||+|+++|+
T Consensus 24 ak~~L~~~~i~~~~~di~~~---~~~~~~l~~~~g~~~~~vP~ifi~g~~igG 73 (93)
T 1t1v_A 24 VTRILDGKRIQYQLVDISQD---NALRDEMRTLAGNPKATPPQIVNGNHYCGD 73 (93)
T ss_dssp HHHHHHHTTCCCEEEETTSC---HHHHHHHHHHTTCTTCCSCEEEETTEEEEE
T ss_pred HHHHHHHCCCceEEEECCCC---HHHHHHHHHHhCCCCCCCCEEEECCEEEeC
Confidence 34578889999999999877 678888888889 7899999999998873
No 106
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.28 E-value=1.5e-07 Score=80.24 Aligned_cols=82 Identities=20% Similarity=0.161 Sum_probs=58.9
Q ss_pred hHHHHhhc-CceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCC--------CCCCCCCc--cceechhhhccCcC
Q psy7674 74 YEKELEKN-KIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRP--------TYPDIPGA--HLGITSDDLFSLNK 142 (164)
Q Consensus 74 ~~~~l~~~-gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~--------~~p~i~g~--~~v~~~~~~~~~~~ 142 (164)
+...+++. +++++.++ .++.+. ...+.||++++|||++| ..|++||. ..+++..+.+....
T Consensus 449 ~~~~~~~~~gv~~~~~~-------~v~~~~-~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~~~ 520 (690)
T 3k30_A 449 REAVLAELPNVEIYRES-------PMTGDD-IVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRL 520 (690)
T ss_dssp HHHHHHTCTTEEEESSC-------CCCHHH-HHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTTCC
T ss_pred HHHHHHHcCCCEEEECC-------eecHHH-HhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCCCC
Confidence 44556666 88887652 232211 14578999999999994 46778886 46788777765533
Q ss_pred -CCCcEEEEC--CcHHHHHhhccc
Q psy7674 143 -DPGKVLLVG--ASYIALECAGCD 163 (164)
Q Consensus 143 -~~~~vvViG--gG~~g~E~A~~l 163 (164)
..++|+||| ||++|+|+|..|
T Consensus 521 ~~g~~VvViG~ggG~~g~e~A~~L 544 (690)
T 3k30_A 521 PDGKKVVVYDDDHYYLGGVVAELL 544 (690)
T ss_dssp CSSSEEEEEECSCSSHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCccHHHHHHHH
Confidence 347899999 999999999876
No 107
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.25 E-value=4.3e-06 Score=68.69 Aligned_cols=62 Identities=21% Similarity=0.216 Sum_probs=44.0
Q ss_pred CeeEEEEeceEEEecCCCCCCCCCCCc-cceechhhh-------ccCcCCCCcEEEECCcHHHHHhhccc
Q psy7674 102 GEERTVSAQNFIIAVGGRPTYPDIPGA-HLGITSDDL-------FSLNKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 102 ~~~~~~~~d~liiAtGs~~~~p~i~g~-~~v~~~~~~-------~~~~~~~~~vvViGgG~~g~E~A~~l 163 (164)
+....+.++.||+|||..|.+|..++. ..++.+.+. ......+|+|+|||+|.+|+|++..|
T Consensus 196 g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L 265 (501)
T 4b63_A 196 GEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDL 265 (501)
T ss_dssp CCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHH
T ss_pred ceEEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHH
Confidence 334578999999999999988875443 334433222 12223578999999999999998655
No 108
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.20 E-value=5.5e-08 Score=62.35 Aligned_cols=28 Identities=36% Similarity=0.966 Sum_probs=26.1
Q ss_pred CceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 53 NSVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
..++||+++|||||.++| ++|++.||+|
T Consensus 4 a~I~vYs~~~Cp~C~~aK-----~~L~~~gi~y 31 (92)
T 2lqo_A 4 AALTIYTTSWCGYCLRLK-----TALTANRIAY 31 (92)
T ss_dssp SCEEEEECTTCSSHHHHH-----HHHHHTTCCC
T ss_pred CcEEEEcCCCCHhHHHHH-----HHHHhcCCce
Confidence 468999999999999999 8999999998
No 109
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.19 E-value=5.3e-07 Score=71.54 Aligned_cols=51 Identities=24% Similarity=0.289 Sum_probs=42.4
Q ss_pred HHHhhcCceEEeeEEEEeeC--cEEEe-CCeeEEEEeceEEEecCCCCCCCCCCCc
Q psy7674 76 KELEKNKIDYFNAKAVFVDK--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA 128 (164)
Q Consensus 76 ~~l~~~gv~~~~~~~~~~~~--~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~ 128 (164)
+.+.+.|++++.++++.+|+ +++.+ ++ .++.||+|++|||++++.|++||.
T Consensus 63 ~~~~~~gv~~i~~~v~~id~~~~~v~~~~g--~~i~yd~LviAtG~~~~~~~i~G~ 116 (401)
T 3vrd_B 63 DGLRAHGIQVVHDSALGIDPDKKLVKTAGG--AEFAYDRCVVAPGIDLLYDKIEGY 116 (401)
T ss_dssp HHHHHTTCEEECSCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECGGGSBTC
T ss_pred HHHHHCCCEEEEeEEEEEEccCcEEEeccc--ceeecceeeeccCCccccCCccCc
Confidence 34567899999999999985 45655 55 689999999999999999999886
No 110
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.17 E-value=6.9e-07 Score=58.67 Aligned_cols=49 Identities=8% Similarity=0.198 Sum_probs=42.3
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecCC
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNN 53 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d 53 (164)
++.+|++.++.|..++|+.+ .+.++.|.+++|.+++|++|++|+++|+-
T Consensus 36 ak~~L~~~~i~~~~vdi~~~---~~~~~~l~~~~g~~~vP~ifi~g~~igG~ 84 (109)
T 1wik_A 36 ILEILNSTGVEYETFDILED---EEVRQGLKTFSNWPTYPQLYVRGDLVGGL 84 (109)
T ss_dssp HHHHHHHTCSCEEEEESSSC---HHHHHHHHHHHSCCSSCEEECSSSEEECH
T ss_pred HHHHHHHcCCCeEEEECCCC---HHHHHHHHHHhCCCCCCEEEECCEEEcCH
Confidence 45678888999999999886 78888888889999999999999988843
No 111
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=98.17 E-value=6.7e-07 Score=57.86 Aligned_cols=49 Identities=24% Similarity=0.374 Sum_probs=41.9
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhc-CCCCcceEEeeceEecCC
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERT-GQKTVPNIFIHGKHIDNN 53 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-g~~~vp~v~i~~~~ig~d 53 (164)
++.+|++.++.|..++|+.. .+.++.+.+++ |.+++|++|++|+++|+-
T Consensus 32 ak~~L~~~~i~y~~idI~~~---~~~~~~l~~~~~g~~~vP~ifi~g~~igG~ 81 (99)
T 3qmx_A 32 ALALLKRKGVEFQEYCIDGD---NEAREAMAARANGKRSLPQIFIDDQHIGGC 81 (99)
T ss_dssp HHHHHHHHTCCCEEEECTTC---HHHHHHHHHHTTTCCCSCEEEETTEEEESH
T ss_pred HHHHHHHCCCCCEEEEcCCC---HHHHHHHHHHhCCCCCCCEEEECCEEEeCh
Confidence 45678889999999999987 67788888888 999999999999988743
No 112
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.15 E-value=1.1e-06 Score=58.08 Aligned_cols=48 Identities=15% Similarity=0.239 Sum_probs=40.0
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhc--------CCCCcceEEeeceEecC
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERT--------GQKTVPNIFIHGKHIDN 52 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--------g~~~vp~v~i~~~~ig~ 52 (164)
++.+|++.+++|++++|+.+ .+.++.|.+.. |.+++|++||++++||+
T Consensus 30 ak~~L~~~gi~y~~vdI~~~---~~~~~~l~~~~~~~~~~~~g~~tvP~vfi~g~~iGG 85 (111)
T 2ct6_A 30 VVRFLEANKIEFEEVDITMS---EEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDRYCGD 85 (111)
T ss_dssp HHHHHHHTTCCEEEEETTTC---HHHHHHHHHSCCTTTCCSSSSCCSCEEEETTEEEEE
T ss_pred HHHHHHHcCCCEEEEECCCC---HHHHHHHHHHhcccccccCCCCCCCEEEECCEEEeC
Confidence 45678889999999999876 67777777774 99999999999998883
No 113
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.13 E-value=1.1e-06 Score=56.19 Aligned_cols=44 Identities=14% Similarity=0.259 Sum_probs=34.3
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhc-CCCCcceEEee-ce
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERT-GQKTVPNIFIH-GK 48 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-g~~~vp~v~i~-~~ 48 (164)
++.+|++.++.|+.++|+.+ ++.++.+.+++ |+++||+|||+ |+
T Consensus 20 aK~~L~~~gi~y~~idi~~d---~~~~~~~~~~~~G~~tVP~I~i~Dg~ 65 (92)
T 2lqo_A 20 LKTALTANRIAYDEVDIEHN---RAAAEFVGSVNGGNRTVPTVKFADGS 65 (92)
T ss_dssp HHHHHHHTTCCCEEEETTTC---HHHHHHHHHHSSSSSCSCEEEETTSC
T ss_pred HHHHHHhcCCceEEEEcCCC---HHHHHHHHHHcCCCCEeCEEEEeCCE
Confidence 46789999999999999877 44455555554 89999999995 55
No 114
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.05 E-value=3.5e-06 Score=55.59 Aligned_cols=50 Identities=20% Similarity=0.338 Sum_probs=44.6
Q ss_pred cccccCCCCCc---cEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEec
Q psy7674 2 VDIQTAPPDYN---FQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHID 51 (164)
Q Consensus 2 ~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig 51 (164)
++.+|++.++. |..++|+..+++.+.++.|.+..|.+++|++|++|++++
T Consensus 35 ~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~~ig 87 (114)
T 2hze_A 35 ALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGKTVPRIFFGKTSIG 87 (114)
T ss_dssp HHHHHTTSCBCTTSEEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEETTEEEE
T ss_pred HHHHHHHcCCCcCceEEEEccCCCChHHHHHHHHHHhCCCCcCEEEECCEEEe
Confidence 45678888999 999999999888899999998899999999999998776
No 115
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=98.03 E-value=1.6e-06 Score=56.37 Aligned_cols=48 Identities=8% Similarity=0.238 Sum_probs=41.6
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecC
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDN 52 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~ 52 (164)
++.+|++.+++|..++|+.+ ++.++.+.+.+|.+++|++|++|+++|+
T Consensus 38 ~~~~L~~~~i~~~~vdi~~~---~~~~~~l~~~~g~~~vP~v~i~g~~igg 85 (105)
T 2yan_A 38 ILEILNSTGVEYETFDILED---EEVRQGLKAYSNWPTYPQLYVKGELVGG 85 (105)
T ss_dssp HHHHHHHHTCCCEEEEGGGC---HHHHHHHHHHHTCCSSCEEEETTEEEEC
T ss_pred HHHHHHHCCCCeEEEECCCC---HHHHHHHHHHHCCCCCCeEEECCEEEeC
Confidence 45677888999999999987 6788888888999999999999998884
No 116
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.97 E-value=3.5e-06 Score=54.42 Aligned_cols=51 Identities=24% Similarity=0.392 Sum_probs=43.7
Q ss_pred cccccCCCCCc---cEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecC
Q psy7674 2 VDIQTAPPDYN---FQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDN 52 (164)
Q Consensus 2 ~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~ 52 (164)
++++|++.+++ |.+++|+.++++.+.++.|.+..|.+++|++|++|+++++
T Consensus 28 ~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~~~g~~i~g 81 (105)
T 1kte_A 28 TQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPRVFIGKECIGG 81 (105)
T ss_dssp HHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEEETTEEEES
T ss_pred HHHHHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCCCCcCeEEECCEEEec
Confidence 35667777888 9999999988888888999888999999999999997764
No 117
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=97.97 E-value=1.3e-07 Score=62.61 Aligned_cols=74 Identities=22% Similarity=0.342 Sum_probs=49.8
Q ss_pred ecCCceEEEec-----cCCcccccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCC
Q psy7674 50 IDNNSVVIFSK-----SWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD 124 (164)
Q Consensus 50 ig~d~vvv~~~-----~~cp~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~ 124 (164)
+..+.+++|++ +|||||.+++ ++|++.|+++. .+.++.+ .. ..+.+.--+| .+.+|.
T Consensus 13 i~~~~Vvlf~kg~~~~~~Cp~C~~ak-----~~L~~~gi~y~----------~~di~~d-~~-~~~~l~~~~g-~~tvP~ 74 (111)
T 3zyw_A 13 THAAPCMLFMKGTPQEPRCGFSKQMV-----EILHKHNIQFS----------SFDIFSD-EE-VRQGLKAYSS-WPTYPQ 74 (111)
T ss_dssp HTSSSEEEEESBCSSSBSSHHHHHHH-----HHHHHTTCCCE----------EEEGGGC-HH-HHHHHHHHHT-CCSSCE
T ss_pred HhcCCEEEEEecCCCCCcchhHHHHH-----HHHHHcCCCeE----------EEECcCC-HH-HHHHHHHHHC-CCCCCE
Confidence 55678999999 9999999999 89999999872 3444221 11 1122222355 445676
Q ss_pred --CCCccceechhhhccCcC
Q psy7674 125 --IPGAHLGITSDDLFSLNK 142 (164)
Q Consensus 125 --i~g~~~v~~~~~~~~~~~ 142 (164)
+.| +++++++++..+.+
T Consensus 75 ifi~g-~~iGG~d~l~~l~~ 93 (111)
T 3zyw_A 75 LYVSG-ELIGGLDIIKELEA 93 (111)
T ss_dssp EEETT-EEEECHHHHHHHHH
T ss_pred EEECC-EEEecHHHHHHHHH
Confidence 355 88888888776543
No 118
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.92 E-value=2.6e-07 Score=59.82 Aligned_cols=72 Identities=21% Similarity=0.508 Sum_probs=46.0
Q ss_pred CCceEEEeccCCcccccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCC--CCCcc
Q psy7674 52 NNSVVIFSKSWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD--IPGAH 129 (164)
Q Consensus 52 ~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~--i~g~~ 129 (164)
...++||+++|||||.+++ .+|++.+++| ..+.++.+.. ..+.+.--++....+|. +.| +
T Consensus 15 ~~~v~vy~~~~Cp~C~~ak-----~~L~~~~i~y----------~~idI~~~~~--~~~~l~~~~~g~~~vP~ifi~g-~ 76 (99)
T 3qmx_A 15 SAKIEIYTWSTCPFCMRAL-----ALLKRKGVEF----------QEYCIDGDNE--AREAMAARANGKRSLPQIFIDD-Q 76 (99)
T ss_dssp CCCEEEEECTTCHHHHHHH-----HHHHHHTCCC----------EEEECTTCHH--HHHHHHHHTTTCCCSCEEEETT-E
T ss_pred CCCEEEEEcCCChhHHHHH-----HHHHHCCCCC----------EEEEcCCCHH--HHHHHHHHhCCCCCCCEEEECC-E
Confidence 5689999999999999999 8899999987 3355533111 11222222323445665 344 7
Q ss_pred ceechhhhccCc
Q psy7674 130 LGITSDDLFSLN 141 (164)
Q Consensus 130 ~v~~~~~~~~~~ 141 (164)
.+.+++++..+.
T Consensus 77 ~igG~d~l~~~~ 88 (99)
T 3qmx_A 77 HIGGCDDIYALD 88 (99)
T ss_dssp EEESHHHHHHHH
T ss_pred EEeChHHHHHHH
Confidence 788888776543
No 119
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=97.90 E-value=1.3e-05 Score=63.22 Aligned_cols=51 Identities=43% Similarity=0.665 Sum_probs=43.8
Q ss_pred cccCCCCCcc---EEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecCCc
Q psy7674 4 IQTAPPDYNF---QVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNNS 54 (164)
Q Consensus 4 ~~~~~~~~~~---~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d~ 54 (164)
.||++.++.| .++++|..++..++|++|.+++|+++||+|||+|++||+.+
T Consensus 280 ~LL~~~gV~y~eidVlEld~~~~~~e~~~~L~~~tG~~TVPqVFI~Gk~IGG~D 333 (362)
T 2jad_A 280 TLFEKLKVPRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYINGKHIGGND 333 (362)
T ss_dssp HHHTTTCCCTTTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCEEEETTEEEESHH
T ss_pred HHHHHcCCCcceEEEEEeccccCCHHHHHHHHHHHCCCCcCEEEECCEEEEChH
Confidence 4788888876 56677888888999999999999999999999999998544
No 120
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=97.89 E-value=7.5e-08 Score=65.33 Aligned_cols=75 Identities=23% Similarity=0.376 Sum_probs=45.8
Q ss_pred cCCceEEEeccCCcccccccchhhHHHHhhc---CceEEeeEEEEeeCcEEEeCCeeE-EEEeceEEEecCCCCCCCC--
Q psy7674 51 DNNSVVIFSKSWCPFCTKAKENNYEKELEKN---KIDYFNAKAVFVDKHRVKFAGEER-TVSAQNFIIAVGGRPTYPD-- 124 (164)
Q Consensus 51 g~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~---gv~~~~~~~~~~~~~~v~v~~~~~-~~~~d~liiAtGs~~~~p~-- 124 (164)
....++||+++|||||.+++ ++|++. ++++ ..+.++.... ....+.+--.|| .+.+|.
T Consensus 12 ~~~~Vvvysk~~Cp~C~~ak-----~lL~~~~~~~v~~----------~~idid~~~d~~~~~~~l~~~~G-~~tVP~If 75 (127)
T 3l4n_A 12 DLSPIIIFSKSTCSYSKGMK-----ELLENEYQFIPNY----------YIIELDKHGHGEELQEYIKLVTG-RGTVPNLL 75 (127)
T ss_dssp TSCSEEEEECTTCHHHHHHH-----HHHHHHEEEESCC----------EEEEGGGSTTHHHHHHHHHHHHS-CCSSCEEE
T ss_pred ccCCEEEEEcCCCccHHHHH-----HHHHHhcccCCCc----------EEEEecCCCCHHHHHHHHHHHcC-CCCcceEE
Confidence 34569999999999999999 788774 4555 3344422100 011122222356 446776
Q ss_pred CCCccceechhhhccCcC
Q psy7674 125 IPGAHLGITSDDLFSLNK 142 (164)
Q Consensus 125 i~g~~~v~~~~~~~~~~~ 142 (164)
|.| +.+++++++..+.+
T Consensus 76 I~G-~~IGG~ddl~~l~~ 92 (127)
T 3l4n_A 76 VNG-VSRGGNEEIKKLHT 92 (127)
T ss_dssp ETT-EECCCHHHHHHHHH
T ss_pred ECC-EEEcCHHHHHHHHH
Confidence 355 78888888776643
No 121
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.81 E-value=7e-06 Score=56.79 Aligned_cols=75 Identities=31% Similarity=0.422 Sum_probs=53.8
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecCCceEEEeccCCcccccccchhhHHHHhhc
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNNSVVIFSKSWCPFCTKAKENNYEKELEKN 81 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~ 81 (164)
++++|++.++.|..++||..+++.+.++.|.+..|.+++|++|++|+++++-+.++ .......+.++++..
T Consensus 65 ~k~~L~~~~i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~ifi~G~~igG~d~l~---------~l~~~g~L~~~L~~~ 135 (146)
T 2ht9_A 65 AKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNGTFIGGATDTH---------RLHKEGKLLPLVHQC 135 (146)
T ss_dssp HHHHHHHHTCCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEEETTEEEESHHHHH---------HHHHTTCHHHHHHHT
T ss_pred HHHHHHHcCCCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEEECCEEEeCchHHH---------HHHHcChHHHHHHHc
Confidence 45677888999999999998778888899998899999999999999776422110 001122355677777
Q ss_pred CceE
Q psy7674 82 KIDY 85 (164)
Q Consensus 82 gv~~ 85 (164)
|+..
T Consensus 136 g~~~ 139 (146)
T 2ht9_A 136 YLKK 139 (146)
T ss_dssp TC--
T ss_pred Ccch
Confidence 7765
No 122
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.80 E-value=7.1e-06 Score=55.49 Aligned_cols=50 Identities=42% Similarity=0.656 Sum_probs=43.6
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEec
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHID 51 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig 51 (164)
++.+|++.+++|..++||..+++.+.++.|.+..|.+++|++|++|++++
T Consensus 43 ~~~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~i~G~~ig 92 (130)
T 2cq9_A 43 AKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNGTFIG 92 (130)
T ss_dssp HHHHHHHHTCCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEEETTEEEE
T ss_pred HHHHHHHcCCCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEEECCEEEc
Confidence 45677888999999999988777888889988899999999999998776
No 123
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.78 E-value=6.1e-06 Score=51.40 Aligned_cols=50 Identities=22% Similarity=0.393 Sum_probs=39.7
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCC-----CCcceEEeeceEecC
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQ-----KTVPNIFIHGKHIDN 52 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~-----~~vp~v~i~~~~ig~ 52 (164)
++.+|++.+++|+++++|..+++...+ .+.++.|. +++|++|++|+++++
T Consensus 20 ~~~~L~~~~i~~~~~~vd~~~~~~~~~-el~~~~g~~~~~~~~vP~i~i~g~~i~g 74 (89)
T 3msz_A 20 AKQWFEENNIAFDETIIDDYAQRSKFY-DEMNQSGKVIFPISTVPQIFIDDEHIGG 74 (89)
T ss_dssp HHHHHHHTTCCCEEEECCSHHHHHHHH-HHHHTTTCCSSCCCSSCEEEETTEEEES
T ss_pred HHHHHHHcCCCceEEEeecCCChhHHH-HHHHHhCCCCCCCCccCEEEECCEEEeC
Confidence 456788899999999998876544444 46667899 999999999997773
No 124
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=97.74 E-value=8.7e-07 Score=59.49 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=48.8
Q ss_pred ecCCceEEEecc-----CCcccccccchhhHHHHhhcCce---EEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCC
Q psy7674 50 IDNNSVVIFSKS-----WCPFCTKAKENNYEKELEKNKID---YFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 50 ig~d~vvv~~~~-----~cp~~~~~~~~~~~~~l~~~gv~---~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~ 121 (164)
|..+.++||+++ |||||..++ ++|+++|++ | ..+.++.+ .. ..+.+.--+| .+.
T Consensus 13 i~~~~Vvvfsk~t~~~p~Cp~C~~ak-----~lL~~~gv~~~~~----------~~~dv~~~-~~-~~~~l~~~sg-~~t 74 (121)
T 3gx8_A 13 IESAPVVLFMKGTPEFPKCGFSRATI-----GLLGNQGVDPAKF----------AAYNVLED-PE-LREGIKEFSE-WPT 74 (121)
T ss_dssp HHSCSEEEEESBCSSSBCTTHHHHHH-----HHHHHHTBCGGGE----------EEEECTTC-HH-HHHHHHHHHT-CCS
T ss_pred hccCCEEEEEeccCCCCCCccHHHHH-----HHHHHcCCCcceE----------EEEEecCC-HH-HHHHHHHHhC-CCC
Confidence 556789999996 999999999 899999998 5 22444221 11 1122222355 456
Q ss_pred CCC--CCCccceechhhhccCc
Q psy7674 122 YPD--IPGAHLGITSDDLFSLN 141 (164)
Q Consensus 122 ~p~--i~g~~~v~~~~~~~~~~ 141 (164)
+|. |.| +++++++++..+.
T Consensus 75 vP~vfI~g-~~iGG~d~l~~l~ 95 (121)
T 3gx8_A 75 IPQLYVNK-EFIGGCDVITSMA 95 (121)
T ss_dssp SCEEEETT-EEEESHHHHHHHH
T ss_pred CCeEEECC-EEEecHHHHHHHH
Confidence 776 355 8889988877654
No 125
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=97.73 E-value=7.9e-07 Score=59.45 Aligned_cols=74 Identities=22% Similarity=0.350 Sum_probs=50.3
Q ss_pred ecCCceEEEecc-----CCcccccccchhhHHHHhhcCc-eEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCC
Q psy7674 50 IDNNSVVIFSKS-----WCPFCTKAKENNYEKELEKNKI-DYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 50 ig~d~vvv~~~~-----~cp~~~~~~~~~~~~~l~~~gv-~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p 123 (164)
|..+.|++|+|+ +||||.+++ ++|++.|+ +| ..+.++.+ .. ..+.+.--|| .|.+|
T Consensus 17 i~~~~VvvF~Kgt~~~P~C~fc~~ak-----~lL~~~gv~~~----------~~~~v~~~-~~-~r~~l~~~sg-~~TvP 78 (118)
T 2wul_A 17 VKKDKVVVFLKGTPEQPQCGFSNAVV-----QILRLHGVRDY----------AAYNVLDD-PE-LRQGIKDYSN-WPTIP 78 (118)
T ss_dssp HHHSSEEEEESBCSSSBSSHHHHHHH-----HHHHHTTCCSC----------EEEETTSC-HH-HHHHHHHHHT-CCSSC
T ss_pred HhcCCEEEEEcCCCCCCCCHHHHHHH-----HHHHHhCCcCe----------EeecccCC-HH-HHHHHHHhcc-CCCCC
Confidence 456789999995 599999999 89999998 45 23444221 11 1233444466 45678
Q ss_pred C--CCCccceechhhhccCcC
Q psy7674 124 D--IPGAHLGITSDDLFSLNK 142 (164)
Q Consensus 124 ~--i~g~~~v~~~~~~~~~~~ 142 (164)
. |.| +++++++++..+.+
T Consensus 79 qIFI~g-~~IGG~Ddl~~l~~ 98 (118)
T 2wul_A 79 QVYLNG-EFVGGCDILLQMHQ 98 (118)
T ss_dssp EEEETT-EEEECHHHHHHHHH
T ss_pred eEeECC-EEECCHHHHHHHHH
Confidence 7 456 89999999877653
No 126
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=97.70 E-value=8.3e-07 Score=58.40 Aligned_cols=73 Identities=21% Similarity=0.321 Sum_probs=48.9
Q ss_pred ecCCceEEEecc-----CCcccccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCC
Q psy7674 50 IDNNSVVIFSKS-----WCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD 124 (164)
Q Consensus 50 ig~d~vvv~~~~-----~cp~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~ 124 (164)
+..+.++||+++ |||||.+++ ++|+++|++| ..+.++.+ . ...+.+.--+|. +.+|.
T Consensus 15 i~~~~Vvvy~k~t~~~p~Cp~C~~ak-----~~L~~~gi~~----------~~~dI~~~-~-~~~~~l~~~~g~-~tvP~ 76 (109)
T 3ipz_A 15 VNSEKVVLFMKGTRDFPMCGFSNTVV-----QILKNLNVPF----------EDVNILEN-E-MLRQGLKEYSNW-PTFPQ 76 (109)
T ss_dssp HTSSSEEEEESBCSSSBSSHHHHHHH-----HHHHHTTCCC----------EEEEGGGC-H-HHHHHHHHHHTC-SSSCE
T ss_pred HccCCEEEEEecCCCCCCChhHHHHH-----HHHHHcCCCc----------EEEECCCC-H-HHHHHHHHHHCC-CCCCe
Confidence 456789999996 999999999 8999999998 33444221 1 112223223553 45666
Q ss_pred --CCCccceechhhhccCc
Q psy7674 125 --IPGAHLGITSDDLFSLN 141 (164)
Q Consensus 125 --i~g~~~v~~~~~~~~~~ 141 (164)
|.| +++++++++..+.
T Consensus 77 ifi~g-~~iGG~d~l~~l~ 94 (109)
T 3ipz_A 77 LYIGG-EFFGGCDITLEAF 94 (109)
T ss_dssp EEETT-EEEECHHHHHHHH
T ss_pred EEECC-EEEeCHHHHHHHH
Confidence 355 8888988877654
No 127
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=97.66 E-value=1.3e-06 Score=58.45 Aligned_cols=73 Identities=21% Similarity=0.325 Sum_probs=48.7
Q ss_pred ecCCceEEEecc-----CCcccccccchhhHHHHhhcCce-EEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCC
Q psy7674 50 IDNNSVVIFSKS-----WCPFCTKAKENNYEKELEKNKID-YFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 50 ig~d~vvv~~~~-----~cp~~~~~~~~~~~~~l~~~gv~-~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p 123 (164)
+..+.++||+++ |||||.+++ ++|+++|+. | +.+.++.+ .. ..+.+.--|| .+.+|
T Consensus 17 i~~~~Vvvfsk~t~~~p~Cp~C~~ak-----~lL~~~gv~~~----------~~vdV~~d-~~-~~~~l~~~tg-~~tvP 78 (118)
T 2wem_A 17 VKKDKVVVFLKGTPEQPQCGFSNAVV-----QILRLHGVRDY----------AAYNVLDD-PE-LRQGIKDYSN-WPTIP 78 (118)
T ss_dssp HHHSSEEEEESBCSSSBSSHHHHHHH-----HHHHHTTCCCC----------EEEESSSC-HH-HHHHHHHHHT-CCSSC
T ss_pred hccCCEEEEEecCCCCCccHHHHHHH-----HHHHHcCCCCC----------EEEEcCCC-HH-HHHHHHHHhC-CCCcC
Confidence 556789999996 999999999 899999994 7 33444321 11 1122222245 45677
Q ss_pred C--CCCccceechhhhccCc
Q psy7674 124 D--IPGAHLGITSDDLFSLN 141 (164)
Q Consensus 124 ~--i~g~~~v~~~~~~~~~~ 141 (164)
. |.| +++++++++..+.
T Consensus 79 ~vfI~g-~~IGG~d~l~~l~ 97 (118)
T 2wem_A 79 QVYLNG-EFVGGCDILLQMH 97 (118)
T ss_dssp EEEETT-EEEESHHHHHHHH
T ss_pred eEEECC-EEEeChHHHHHHH
Confidence 6 355 8888888877654
No 128
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=97.65 E-value=2.2e-06 Score=53.79 Aligned_cols=71 Identities=18% Similarity=0.229 Sum_probs=45.6
Q ss_pred eEEEecc----CCcccccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCe---eEEEEeceEEEecCCCC----CCC
Q psy7674 55 VVIFSKS----WCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGE---ERTVSAQNFIIAVGGRP----TYP 123 (164)
Q Consensus 55 vvv~~~~----~cp~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~---~~~~~~d~liiAtGs~~----~~p 123 (164)
+++|+++ |||||.+++ .+|+++|+++. .+.++.. ......+.+.-.+|.+. .+|
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak-----~~L~~~gi~y~----------~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP 66 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAK-----RLLTVKKQPFE----------FINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMP 66 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHH-----HHHHHTTCCEE----------EEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSC
T ss_pred EEEEEeCCCCCcCccHHHHH-----HHHHHcCCCEE----------EEEeeccccccCHHHHHHHHHHhCCCCCCCCccC
Confidence 6899999 999999999 89999999973 3444310 01111123444466552 567
Q ss_pred C--CCCccceechhhhccC
Q psy7674 124 D--IPGAHLGITSDDLFSL 140 (164)
Q Consensus 124 ~--i~g~~~v~~~~~~~~~ 140 (164)
. +++.+.+++++++..+
T Consensus 67 ~v~i~~g~~igG~d~l~~~ 85 (87)
T 1aba_A 67 QVFAPDGSHIGGFDQLREY 85 (87)
T ss_dssp EEECTTSCEEESHHHHHHH
T ss_pred EEEEECCEEEeCHHHHHHh
Confidence 6 4243788888887654
No 129
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=97.63 E-value=1.8e-06 Score=54.93 Aligned_cols=71 Identities=14% Similarity=0.199 Sum_probs=45.7
Q ss_pred ceEEEeccCCccc------ccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCC-CCCCCC--
Q psy7674 54 SVVIFSKSWCPFC------TKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGG-RPTYPD-- 124 (164)
Q Consensus 54 ~vvv~~~~~cp~~------~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs-~~~~p~-- 124 (164)
.+++|++++||+| .+++ .+|++.|++| ..+.++.+ . ...+.+.-.+|. ...+|.
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak-----~~L~~~~i~~----------~~~di~~~-~-~~~~~l~~~~g~~~~~vP~if 65 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVT-----RILDGKRIQY----------QLVDISQD-N-ALRDEMRTLAGNPKATPPQIV 65 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHH-----HHHHHTTCCC----------EEEETTSC-H-HHHHHHHHHTTCTTCCSCEEE
T ss_pred CEEEEEcCCCCCchhhHHHHHHH-----HHHHHCCCce----------EEEECCCC-H-HHHHHHHHHhCCCCCCCCEEE
Confidence 5889999999999 7888 8899999987 33555321 1 111223323563 335666
Q ss_pred CCCccceechhhhccCcC
Q psy7674 125 IPGAHLGITSDDLFSLNK 142 (164)
Q Consensus 125 i~g~~~v~~~~~~~~~~~ 142 (164)
+.| +++++++++..+.+
T Consensus 66 i~g-~~igG~d~l~~l~~ 82 (93)
T 1t1v_A 66 NGN-HYCGDYELFVEAVE 82 (93)
T ss_dssp ETT-EEEEEHHHHHHHHH
T ss_pred ECC-EEEeCHHHHHHHHh
Confidence 344 78888888776543
No 130
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.57 E-value=4e-06 Score=54.93 Aligned_cols=72 Identities=24% Similarity=0.370 Sum_probs=46.2
Q ss_pred ecCCceEEEec-----cCCcccccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCC
Q psy7674 50 IDNNSVVIFSK-----SWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD 124 (164)
Q Consensus 50 ig~d~vvv~~~-----~~cp~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~ 124 (164)
+....+++|++ +|||||..++ .+|++.+++| ..+.++.+ ....+.+.-.+| .+.+|.
T Consensus 12 i~~~~vvvy~~g~~~~~~Cp~C~~ak-----~~L~~~~i~~----------~~vdi~~~--~~~~~~l~~~~g-~~~vP~ 73 (109)
T 1wik_A 12 TNKASVMLFMKGNKQEAKCGFSKQIL-----EILNSTGVEY----------ETFDILED--EEVRQGLKTFSN-WPTYPQ 73 (109)
T ss_dssp HTTSSEEEEESSTTTCCCSSTHHHHH-----HHHHHTCSCE----------EEEESSSC--HHHHHHHHHHHS-CCSSCE
T ss_pred hccCCEEEEEecCCCCCCCchHHHHH-----HHHHHcCCCe----------EEEECCCC--HHHHHHHHHHhC-CCCCCE
Confidence 34567999999 9999999999 8899999987 33555321 111122222345 345666
Q ss_pred --CCCccceechhhhccC
Q psy7674 125 --IPGAHLGITSDDLFSL 140 (164)
Q Consensus 125 --i~g~~~v~~~~~~~~~ 140 (164)
+.| +.+.+++++..+
T Consensus 74 ifi~g-~~igG~d~l~~l 90 (109)
T 1wik_A 74 LYVRG-DLVGGLDIVKEL 90 (109)
T ss_dssp EECSS-SEEECHHHHHHH
T ss_pred EEECC-EEEcCHHHHHHH
Confidence 344 778877765543
No 131
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.55 E-value=2.7e-05 Score=50.32 Aligned_cols=51 Identities=16% Similarity=0.174 Sum_probs=40.2
Q ss_pred cccccCCCCCccEEEEecCCC--ChhHHHHHHHhhcCCCCcceEEeec-eEecC
Q psy7674 2 VDIQTAPPDYNFQVVELDKLP--NGAQIQTALFERTGQKTVPNIFIHG-KHIDN 52 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~l~~~~g~~~vp~v~i~~-~~ig~ 52 (164)
++.+|++.++.|+.++|+..+ +..++.+.+.+.+|.+++|++|+++ +++++
T Consensus 38 ak~~L~~~~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i~~~~~igg 91 (103)
T 3nzn_A 38 TKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTIINDEKAIVG 91 (103)
T ss_dssp HHHHHHHHTBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEETTTEEEES
T ss_pred HHHHHHHcCCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEECCCEEEEc
Confidence 456788899999999999753 3345566666778999999999998 87763
No 132
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.50 E-value=5.8e-06 Score=54.47 Aligned_cols=69 Identities=23% Similarity=0.301 Sum_probs=43.5
Q ss_pred ceEEEeccCCcccc------cccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEe--------cCCC
Q psy7674 54 SVVIFSKSWCPFCT------KAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIA--------VGGR 119 (164)
Q Consensus 54 ~vvv~~~~~cp~~~------~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiA--------tGs~ 119 (164)
.++||++++||||. +++ .+|++++++| ..+.++.+ .. ..+.+.-. +| .
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak-----~~L~~~gi~y----------~~vdI~~~-~~-~~~~l~~~~~~~~~~~~g-~ 70 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVV-----RFLEANKIEF----------EEVDITMS-EE-QRQWMYKNVPPEKKPTQG-N 70 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHH-----HHHHHTTCCE----------EEEETTTC-HH-HHHHHHHSCCTTTCCSSS-S
T ss_pred EEEEEEcCCCCCcccchhHHHHH-----HHHHHcCCCE----------EEEECCCC-HH-HHHHHHHHhcccccccCC-C
Confidence 58899999999999 677 8899999988 33444321 11 11111111 24 4
Q ss_pred CCCCCC--CCccceechhhhccCc
Q psy7674 120 PTYPDI--PGAHLGITSDDLFSLN 141 (164)
Q Consensus 120 ~~~p~i--~g~~~v~~~~~~~~~~ 141 (164)
+.+|.+ .| +++.+++++..+.
T Consensus 71 ~tvP~vfi~g-~~iGG~d~l~~l~ 93 (111)
T 2ct6_A 71 PLPPQIFNGD-RYCGDYDSFFESK 93 (111)
T ss_dssp CCSCEEEETT-EEEEEHHHHHHHH
T ss_pred CCCCEEEECC-EEEeCHHHHHHHH
Confidence 456663 44 7888888766554
No 133
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.50 E-value=0.00012 Score=58.53 Aligned_cols=89 Identities=17% Similarity=0.138 Sum_probs=55.2
Q ss_pred hhHHHHhhcCceEEee-EEEEe--e----CcEEEe--CCeeEEEEeceEEEecCCCCC--------------------CC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFV--D----KHRVKF--AGEERTVSAQNFIIAVGGRPT--------------------YP 123 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~--~----~~~v~v--~~~~~~~~~d~liiAtGs~~~--------------------~p 123 (164)
.+.+.+++.|++++.+ .++.+ + ...+.+ ++ ..+.+|++|+|||+.+. .|
T Consensus 114 ~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~--g~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~ 191 (401)
T 2gqf_A 114 MLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNS--TQWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIP 191 (401)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETT--EEEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECC--CEEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCccc
Confidence 3556677889999987 44444 3 333444 43 36999999999999873 23
Q ss_pred CCCCc-cceechhh-h---ccCcCCCCcEEEEC---------------CcHHHHHhhccc
Q psy7674 124 DIPGA-HLGITSDD-L---FSLNKDPGKVLLVG---------------ASYIALECAGCD 163 (164)
Q Consensus 124 ~i~g~-~~v~~~~~-~---~~~~~~~~~vvViG---------------gG~~g~E~A~~l 163 (164)
..|+. ....+..+ + +.....+.++.|+| +|++++|++..+
T Consensus 192 ~~p~l~~~~~~~~~~~~~~l~g~~~~~~~~i~G~~~~~g~~l~t~~g~sG~~~l~~s~~~ 251 (401)
T 2gqf_A 192 PRASLVPFTYRETDKFLTALSGISLPVTITALCGKSFYNQLLFTHRGISGPAVLQISNYW 251 (401)
T ss_dssp EEEESCCEECCGGGGGGGGGTTCEEEEEEEETTSCEEEEEEEECSSEEESHHHHHHTTTC
T ss_pred CcceeeceecCCchhhcccCCCeeeeeEEEEcCCceEEeCEEEECCCccHHHHHHHHHHH
Confidence 34443 11122222 3 22223345666669 899999999875
No 134
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.38 E-value=4.8e-05 Score=50.10 Aligned_cols=73 Identities=22% Similarity=0.348 Sum_probs=46.8
Q ss_pred cCCceEEEeccCCcccccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCC--eeEEEEeceEEEecCCCCCCCC--CC
Q psy7674 51 DNNSVVIFSKSWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAG--EERTVSAQNFIIAVGGRPTYPD--IP 126 (164)
Q Consensus 51 g~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~--~~~~~~~d~liiAtGs~~~~p~--i~ 126 (164)
....+++|+++|||||.+++ ..|++.|+++ ..+.++. +...+ .+.+.-.+| .+.+|. +.
T Consensus 15 ~~~~v~vy~~~~Cp~C~~ak-----~~L~~~~i~~----------~~~dvd~~~~~~~~-~~~l~~~~g-~~tvP~vfi~ 77 (114)
T 3h8q_A 15 ERSRVVIFSKSYCPHSTRVK-----ELFSSLGVEC----------NVLELDQVDDGARV-QEVLSEITN-QKTVPNIFVN 77 (114)
T ss_dssp HHCSEEEEECTTCHHHHHHH-----HHHHHTTCCC----------EEEETTTSTTHHHH-HHHHHHHHS-CCSSCEEEET
T ss_pred ccCCEEEEEcCCCCcHHHHH-----HHHHHcCCCc----------EEEEecCCCChHHH-HHHHHHHhC-CCccCEEEEC
Confidence 34568999999999999999 8899999987 2344432 00110 112222355 445666 44
Q ss_pred CccceechhhhccCc
Q psy7674 127 GAHLGITSDDLFSLN 141 (164)
Q Consensus 127 g~~~v~~~~~~~~~~ 141 (164)
| +.+++++++..+.
T Consensus 78 g-~~igG~d~l~~l~ 91 (114)
T 3h8q_A 78 K-VHVGGCDQTFQAY 91 (114)
T ss_dssp T-EEEESHHHHHHHH
T ss_pred C-EEEeCHHHHHHHH
Confidence 5 7888888776554
No 135
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.37 E-value=0.00011 Score=46.01 Aligned_cols=47 Identities=23% Similarity=0.455 Sum_probs=38.6
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEec
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHID 51 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig 51 (164)
++.+|++.+++|..++++.. ...++.+.+..|.+++|++|++|++++
T Consensus 22 ~~~~L~~~~i~~~~~di~~~---~~~~~~l~~~~~~~~vP~l~~~g~~i~ 68 (92)
T 2khp_A 22 AKALLARKGAEFNEIDASAT---PELRAEMQERSGRNTFPQIFIGSVHVG 68 (92)
T ss_dssp HHHHHHHTTCCCEEEESTTS---HHHHHHHHHHHTSSCCCEEEETTEEEE
T ss_pred HHHHHHHcCCCcEEEECCCC---HHHHHHHHHHhCCCCcCEEEECCEEEc
Confidence 35677888999999999865 667777777789999999999998666
No 136
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.37 E-value=7.8e-05 Score=45.49 Aligned_cols=47 Identities=30% Similarity=0.517 Sum_probs=37.7
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEec
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHID 51 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig 51 (164)
++.+|++.+++|..++++.. .+.++.+.+..|.+++|++|++|+.++
T Consensus 17 ~~~~l~~~~i~~~~~~i~~~---~~~~~~~~~~~~~~~vP~l~~~g~~i~ 63 (82)
T 1fov_A 17 AKALLSSKGVSFQELPIDGN---AAKREEMIKRSGRTTVPQIFIDAQHIG 63 (82)
T ss_dssp HHHHHHHHTCCCEEEECTTC---SHHHHHHHHHHSSCCSCEEEETTEEEE
T ss_pred HHHHHHHCCCCcEEEECCCC---HHHHHHHHHHhCCCCcCEEEECCEEEe
Confidence 34567778899999999875 556667777789999999999998665
No 137
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=97.36 E-value=5.9e-06 Score=55.35 Aligned_cols=71 Identities=20% Similarity=0.202 Sum_probs=45.9
Q ss_pred ceEEEeccCCccc------ccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecC-------CCC
Q psy7674 54 SVVIFSKSWCPFC------TKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVG-------GRP 120 (164)
Q Consensus 54 ~vvv~~~~~cp~~------~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtG-------s~~ 120 (164)
.|+||+.++|||| .+++ .+|+++||+| .++.++.+ . ...+.+.-.++ .++
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK-----~lL~~kgV~f----------eEidI~~d-~-~~r~eM~~~~~~~~~~~~G~~ 63 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVL-----GFLEANKIGF----------EEKDIAAN-E-ENRKWMRENVPENSRPATGYP 63 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHH-----HHHHHTTCCE----------EEEECTTC-H-HHHHHHHHHSCGGGSCSSSSC
T ss_pred CEEEEecCCCCCccchHHHHHHH-----HHHHHCCCce----------EEEECCCC-H-HHHHHHHHhccccccccCCCc
Confidence 3789999999999 5667 8999999998 44555331 1 11222333342 355
Q ss_pred CCCCC-CCccceechhhhccCc
Q psy7674 121 TYPDI-PGAHLGITSDDLFSLN 141 (164)
Q Consensus 121 ~~p~i-~g~~~v~~~~~~~~~~ 141 (164)
.+|.| -|..++++++|+..+.
T Consensus 64 tvPQIFi~~~~iGG~Dd~~~l~ 85 (121)
T 1u6t_A 64 LPPQIFNESQYRGDYDAFFEAR 85 (121)
T ss_dssp CSCEEEETTEEEEEHHHHHHHH
T ss_pred CCCEEEECCEEEechHHHHHhh
Confidence 66664 3338899988776654
No 138
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=97.36 E-value=4.9e-06 Score=56.88 Aligned_cols=70 Identities=19% Similarity=0.313 Sum_probs=46.5
Q ss_pred CCceEEEec-----cCCcccccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCC--
Q psy7674 52 NNSVVIFSK-----SWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD-- 124 (164)
Q Consensus 52 ~d~vvv~~~-----~~cp~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~-- 124 (164)
...+++|++ +|||||.+++ .+|++.|++| ..+.++.+ . ...+.+.--+| .+.+|.
T Consensus 34 ~~~Vvvy~ks~~~~~~Cp~C~~ak-----~~L~~~gv~y----------~~vdI~~d-~-~~~~~L~~~~G-~~tvP~Vf 95 (135)
T 2wci_A 34 ENPILLYMKGSPKLPSCGFSAQAV-----QALAACGERF----------AYVDILQN-P-DIRAELPKYAN-WPTFPQLW 95 (135)
T ss_dssp HCSEEEEESBCSSSBSSHHHHHHH-----HHHHTTCSCC----------EEEEGGGC-H-HHHHHHHHHHT-CCSSCEEE
T ss_pred cCCEEEEEEecCCCCCCccHHHHH-----HHHHHcCCce----------EEEECCCC-H-HHHHHHHHHHC-CCCcCEEE
Confidence 557899999 8999999999 8899999987 33544321 1 12233333355 446676
Q ss_pred CCCccceechhhhccC
Q psy7674 125 IPGAHLGITSDDLFSL 140 (164)
Q Consensus 125 i~g~~~v~~~~~~~~~ 140 (164)
+.| +.+++++++..+
T Consensus 96 I~G-~~iGG~d~l~~l 110 (135)
T 2wci_A 96 VDG-ELVGGCDIVIEM 110 (135)
T ss_dssp ETT-EEEESHHHHHHH
T ss_pred ECC-EEEEChHHHHHH
Confidence 345 788888777654
No 139
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.30 E-value=6.6e-05 Score=49.13 Aligned_cols=72 Identities=25% Similarity=0.451 Sum_probs=44.7
Q ss_pred cCCceEEEeccCCcccccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCe---eEEEEeceEEEecCCCCCCCC--C
Q psy7674 51 DNNSVVIFSKSWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGE---ERTVSAQNFIIAVGGRPTYPD--I 125 (164)
Q Consensus 51 g~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~---~~~~~~d~liiAtGs~~~~p~--i 125 (164)
....+++|+++|||||...+ .+|+++++++. .+.++.. ...+ .+.+--.+| .+.+|. +
T Consensus 17 ~~~~v~vy~~~~Cp~C~~~~-----~~L~~~~i~~~----------~~di~~~~~~~~~~-~~~l~~~~g-~~tvP~ifi 79 (113)
T 3rhb_A 17 TENTVVIYSKTWCSYCTEVK-----TLFKRLGVQPL----------VVELDQLGPQGPQL-QKVLERLTG-QHTVPNVFV 79 (113)
T ss_dssp HHSSEEEEECTTCHHHHHHH-----HHHHHTTCCCE----------EEEGGGSTTHHHHH-HHHHHHHHS-CCSSCEEEE
T ss_pred hcCCEEEEECCCChhHHHHH-----HHHHHcCCCCe----------EEEeecCCCChHHH-HHHHHHHhC-CCCcCEEEE
Confidence 34568999999999999999 88999999872 3444210 0111 111222245 345666 3
Q ss_pred CCccceechhhhccC
Q psy7674 126 PGAHLGITSDDLFSL 140 (164)
Q Consensus 126 ~g~~~v~~~~~~~~~ 140 (164)
.| +.+.+++++..+
T Consensus 80 ~g-~~igG~~~~~~~ 93 (113)
T 3rhb_A 80 CG-KHIGGCTDTVKL 93 (113)
T ss_dssp TT-EEEESHHHHHHH
T ss_pred CC-EEEcCcHHHHHH
Confidence 44 788888776544
No 140
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.21 E-value=6.3e-05 Score=61.99 Aligned_cols=20 Identities=25% Similarity=0.227 Sum_probs=17.4
Q ss_pred CCcEEEECCcHHHHHhhccc
Q psy7674 144 PGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 144 ~~~vvViGgG~~g~E~A~~l 163 (164)
..+|+|||||+.|+.+|..|
T Consensus 212 ~~dVvIIGgG~AGl~aA~~l 231 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYS 231 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHH
T ss_pred cccEEEECCcHHHHHHHHHH
Confidence 35799999999999999765
No 141
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.11 E-value=0.00019 Score=44.95 Aligned_cols=50 Identities=20% Similarity=0.264 Sum_probs=39.1
Q ss_pred cccccCCCCCccEEEEecCCCCh--hHHHHHHHhhcCCCCcceEEeeceEec
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNG--AQIQTALFERTGQKTVPNIFIHGKHID 51 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~l~~~~g~~~vp~v~i~~~~ig 51 (164)
++.+|++.++.|+.++|+..+.. .++++.+.+..|..++|+++++|++++
T Consensus 28 ~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~~g~~i~ 79 (92)
T 3ic4_A 28 TLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVKGDKHVL 79 (92)
T ss_dssp HHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEETTEEEE
T ss_pred HHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEECCEEEe
Confidence 45678888999999999976432 344577777789999999999998665
No 142
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.05 E-value=0.0002 Score=46.09 Aligned_cols=29 Identities=31% Similarity=0.660 Sum_probs=26.5
Q ss_pred CCceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 52 NNSVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 52 ~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
...+++|+++|||+|...+ ..|++.++++
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak-----~~L~~~~i~y 49 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTK-----KLLTDLGVDF 49 (103)
T ss_dssp CSCEEEEECSSCHHHHHHH-----HHHHHHTBCE
T ss_pred CCeEEEEcCCCCchHHHHH-----HHHHHcCCCc
Confidence 5679999999999999999 8899999987
No 143
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=96.98 E-value=1.5e-05 Score=65.43 Aligned_cols=56 Identities=21% Similarity=0.078 Sum_probs=38.9
Q ss_pred EeceEEEecCCCCCCCCCCCc--cceec---hhhhccC--------------cCCCCcEEEECCcHHHHHhhccc
Q psy7674 108 SAQNFIIAVGGRPTYPDIPGA--HLGIT---SDDLFSL--------------NKDPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 108 ~~d~liiAtGs~~~~p~i~g~--~~v~~---~~~~~~~--------------~~~~~~vvViGgG~~g~E~A~~l 163 (164)
.||+++++||++|+.|++.+. +.+.+ ..+.... .....+|+|||||++|+++|..|
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~L 111 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVEL 111 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHH
Confidence 578899999999887776553 33322 2222222 12347899999999999999876
No 144
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=96.98 E-value=0.00024 Score=44.25 Aligned_cols=46 Identities=17% Similarity=0.398 Sum_probs=35.5
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhc-CCCCcceEEeeceEecC
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERT-GQKTVPNIFIHGKHIDN 52 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-g~~~vp~v~i~~~~ig~ 52 (164)
++.+|++.+++|..++++ .+.++.+.+.. |.+++|++|++|+.+++
T Consensus 22 ~~~~L~~~~i~~~~vdv~-----~~~~~~l~~~~~~~~~vP~l~~~g~~i~g 68 (89)
T 2klx_A 22 ARDLLDKKGVKYTDIDAS-----TSLRQEMVQRANGRNTFPQIFIGDYHVGG 68 (89)
T ss_dssp HHHHHHHHTCCEEEECSC-----HHHHHHHHHHHHSSCCSCEEEETTEECCS
T ss_pred HHHHHHHcCCCcEEEECC-----HHHHHHHHHHhCCCCCcCEEEECCEEEeC
Confidence 345677778888888777 45566676777 99999999999987763
No 145
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.87 E-value=0.00029 Score=43.47 Aligned_cols=27 Identities=37% Similarity=0.829 Sum_probs=24.4
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+++|||+|+..+ ..|++.++++
T Consensus 5 ~v~ly~~~~Cp~C~~~~-----~~L~~~~i~~ 31 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAK-----QWFEENNIAF 31 (89)
T ss_dssp CEEEEECTTCHHHHHHH-----HHHHHTTCCC
T ss_pred EEEEEEcCCChhHHHHH-----HHHHHcCCCc
Confidence 57899999999999998 8899999887
No 146
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.80 E-value=0.00044 Score=44.59 Aligned_cols=71 Identities=24% Similarity=0.375 Sum_probs=44.4
Q ss_pred CCceEEEec-----cCCcccccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCC--
Q psy7674 52 NNSVVIFSK-----SWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD-- 124 (164)
Q Consensus 52 ~d~vvv~~~-----~~cp~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~-- 124 (164)
...+++|++ +|||||...+ ..|++.+++| ..+.++.+ . ...+.+.-.+| .+.+|.
T Consensus 16 ~~~vvvf~~g~~~~~~C~~C~~~~-----~~L~~~~i~~----------~~vdi~~~-~-~~~~~l~~~~g-~~~vP~v~ 77 (105)
T 2yan_A 16 KASVMLFMKGNKQEAKCGFSKQIL-----EILNSTGVEY----------ETFDILED-E-EVRQGLKAYSN-WPTYPQLY 77 (105)
T ss_dssp SSSEEEEESBCSSSBCTTHHHHHH-----HHHHHHTCCC----------EEEEGGGC-H-HHHHHHHHHHT-CCSSCEEE
T ss_pred cCCEEEEEecCCCCCCCccHHHHH-----HHHHHCCCCe----------EEEECCCC-H-HHHHHHHHHHC-CCCCCeEE
Confidence 345888998 9999999999 8889999887 23444321 1 11111222245 345665
Q ss_pred CCCccceechhhhccCc
Q psy7674 125 IPGAHLGITSDDLFSLN 141 (164)
Q Consensus 125 i~g~~~v~~~~~~~~~~ 141 (164)
+.| +.+.+++++..+.
T Consensus 78 i~g-~~igg~d~~~~l~ 93 (105)
T 2yan_A 78 VKG-ELVGGLDIVKELK 93 (105)
T ss_dssp ETT-EEEECHHHHHHHH
T ss_pred ECC-EEEeChHHHHHHH
Confidence 344 7788888776554
No 147
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=96.78 E-value=0.0005 Score=45.45 Aligned_cols=71 Identities=27% Similarity=0.408 Sum_probs=42.7
Q ss_pred CceEEEeccCCcccccc-cchhhHHHHhhcC---ceEEeeEEEEeeCcEEEeCCeeE-EEEeceEEEecCCCCCCCC--C
Q psy7674 53 NSVVIFSKSWCPFCTKA-KENNYEKELEKNK---IDYFNAKAVFVDKHRVKFAGEER-TVSAQNFIIAVGGRPTYPD--I 125 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~-~~~~~~~~l~~~g---v~~~~~~~~~~~~~~v~v~~~~~-~~~~d~liiAtGs~~~~p~--i 125 (164)
..+++|+++|||||... + ..|++.+ +++. .+.++.... .-..+.+.-.+|. +.+|. +
T Consensus 25 ~~Vvvf~~~~Cp~C~~alk-----~~L~~~~~~~i~~~----------~vdid~~~~~~~~~~~l~~~~g~-~tvP~vfi 88 (118)
T 3c1r_A 25 NEIFVASKTYCPYCHAALN-----TLFEKLKVPRSKVL----------VLQLNDMKEGADIQAALYEINGQ-RTVPNIYI 88 (118)
T ss_dssp SSEEEEECSSCHHHHHHHH-----HHHTTSCCCGGGEE----------EEEGGGSTTHHHHHHHHHHHHSC-CSSCEEEE
T ss_pred CcEEEEEcCCCcCHHHHHH-----HHHHHcCCCCCCeE----------EEECccCCChHHHHHHHHHHhCC-CCcCEEEE
Confidence 35889999999999999 7 8888888 7762 344422100 0011122223553 34565 3
Q ss_pred CCccceechhhhccC
Q psy7674 126 PGAHLGITSDDLFSL 140 (164)
Q Consensus 126 ~g~~~v~~~~~~~~~ 140 (164)
.| +.+.+++++..+
T Consensus 89 ~g-~~igG~d~l~~l 102 (118)
T 3c1r_A 89 NG-KHIGGNDDLQEL 102 (118)
T ss_dssp TT-EEEESHHHHHHH
T ss_pred CC-EEEEcHHHHHHH
Confidence 44 677777776554
No 148
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=96.77 E-value=0.00056 Score=43.73 Aligned_cols=30 Identities=37% Similarity=0.716 Sum_probs=25.7
Q ss_pred ecCCceEEEeccCCcccccccchhhHHHHhhcCce
Q psy7674 50 IDNNSVVIFSKSWCPFCTKAKENNYEKELEKNKID 84 (164)
Q Consensus 50 ig~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~ 84 (164)
+....+++|+++|||+|...+ ..|++.+++
T Consensus 9 i~~~~v~~f~~~~C~~C~~~~-----~~L~~~~~~ 38 (105)
T 1kte_A 9 IQPGKVVVFIKPTCPFCRKTQ-----ELLSQLPFK 38 (105)
T ss_dssp CCTTCEEEEECSSCHHHHHHH-----HHHHHSCBC
T ss_pred cccCCEEEEEcCCCHhHHHHH-----HHHHHcCCC
Confidence 345568999999999999988 888888888
No 149
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.72 E-value=0.00047 Score=46.43 Aligned_cols=73 Identities=18% Similarity=0.307 Sum_probs=44.7
Q ss_pred CCceEEEeccCCcccccc-cchhhHHHHhhcC---ceEEeeEEEEeeCcEEEeCCeeE-EEEeceEEEecCCCCCCCC--
Q psy7674 52 NNSVVIFSKSWCPFCTKA-KENNYEKELEKNK---IDYFNAKAVFVDKHRVKFAGEER-TVSAQNFIIAVGGRPTYPD-- 124 (164)
Q Consensus 52 ~d~vvv~~~~~cp~~~~~-~~~~~~~~l~~~g---v~~~~~~~~~~~~~~v~v~~~~~-~~~~d~liiAtGs~~~~p~-- 124 (164)
...+++|+++|||||.+. + ..|++.+ +++ ..+.++.... ....+.+.-.+|. +.+|.
T Consensus 36 ~~~Vvvy~~~~Cp~C~~a~k-----~~L~~~~~~~i~~----------~~vdvd~~~~~~~~~~~L~~~~g~-~tVP~vf 99 (129)
T 3ctg_A 36 QKEVFVAAKTYCPYCKATLS-----TLFQELNVPKSKA----------LVLELDEMSNGSEIQDALEEISGQ-KTVPNVY 99 (129)
T ss_dssp HSSEEEEECTTCHHHHHHHH-----HHHTTSCCCGGGE----------EEEEGGGSTTHHHHHHHHHHHHSC-CSSCEEE
T ss_pred CCCEEEEECCCCCchHHHHH-----HHHHhcCccCCCc----------EEEEccccCCHHHHHHHHHHHhCC-CCCCEEE
Confidence 345899999999999999 8 8899988 776 2344422100 0011223333553 45666
Q ss_pred CCCccceechhhhccCc
Q psy7674 125 IPGAHLGITSDDLFSLN 141 (164)
Q Consensus 125 i~g~~~v~~~~~~~~~~ 141 (164)
+.| +.+.+++++..+.
T Consensus 100 i~g-~~igG~d~l~~l~ 115 (129)
T 3ctg_A 100 ING-KHIGGNSDLETLK 115 (129)
T ss_dssp ETT-EEEESHHHHHHHH
T ss_pred ECC-EEEcCHHHHHHHH
Confidence 344 7788888776543
No 150
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=96.72 E-value=0.00067 Score=44.37 Aligned_cols=30 Identities=43% Similarity=0.715 Sum_probs=25.9
Q ss_pred ecCCceEEEeccCCcccccccchhhHHHHhhcCce
Q psy7674 50 IDNNSVVIFSKSWCPFCTKAKENNYEKELEKNKID 84 (164)
Q Consensus 50 ig~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~ 84 (164)
+....+++|+++|||+|...+ ..|++.+++
T Consensus 16 i~~~~vv~f~~~~Cp~C~~~~-----~~L~~~~~~ 45 (114)
T 2hze_A 16 LANNKVTIFVKYTCPFCRNAL-----DILNKFSFK 45 (114)
T ss_dssp CCTTCEEEEECTTCHHHHHHH-----HHHTTSCBC
T ss_pred hccCCEEEEEeCCChhHHHHH-----HHHHHcCCC
Confidence 345678999999999999998 888888888
No 151
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=96.62 E-value=0.00087 Score=41.60 Aligned_cols=27 Identities=26% Similarity=0.957 Sum_probs=24.0
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+++|||+|...+ ..|++.++++
T Consensus 7 ~v~~y~~~~C~~C~~~~-----~~L~~~~i~~ 33 (89)
T 2klx_A 7 EIILYTRPNCPYCKRAR-----DLLDKKGVKY 33 (89)
T ss_dssp CEEEESCSCCTTTHHHH-----HHHHHHTCCE
T ss_pred eEEEEECCCChhHHHHH-----HHHHHcCCCc
Confidence 57899999999999988 7888888887
No 152
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.61 E-value=0.00079 Score=49.64 Aligned_cols=47 Identities=26% Similarity=0.381 Sum_probs=37.9
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEecC
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDN 52 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig~ 52 (164)
++.+|++.++.|+.++|+.++.. +.|.+..|.+++|++|++|+++++
T Consensus 186 a~~~L~~~~i~~~~~~i~~~~~~----~~l~~~~g~~~vP~~~~~g~~i~g 232 (241)
T 1nm3_A 186 AKQLLHDKGLSFEEIILGHDATI----VSVRAVSGRTTVPQVFIGGKHIGG 232 (241)
T ss_dssp HHHHHHHHTCCCEEEETTTTCCH----HHHHHHTCCSSSCEEEETTEEEES
T ss_pred HHHHHHHcCCceEEEECCCchHH----HHHHHHhCCCCcCEEEECCEEEEC
Confidence 35577888999999999877442 566677899999999999998874
No 153
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=96.59 E-value=0.00048 Score=43.00 Aligned_cols=27 Identities=26% Similarity=0.737 Sum_probs=24.3
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+.+|||+|.+.+ ..|++.++++
T Consensus 13 ~v~ly~~~~Cp~C~~~~-----~~L~~~gi~~ 39 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTL-----EFLKREGVDF 39 (92)
T ss_dssp SSEEEECTTCHHHHHHH-----HHHHHHTCCC
T ss_pred eEEEEECCCChHHHHHH-----HHHHHcCCCc
Confidence 47899999999999998 8888889887
No 154
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.50 E-value=0.0012 Score=40.32 Aligned_cols=27 Identities=44% Similarity=0.933 Sum_probs=20.6
Q ss_pred ceEEEeccCCcccccccchhhHHHHhh-----cCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEK-----NKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~-----~gv~~ 85 (164)
.+++|+++|||+|...+ ..|++ .++++
T Consensus 2 ~v~~f~~~~C~~C~~~~-----~~l~~l~~~~~~i~~ 33 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAK-----DLAEKLSNERDDFQY 33 (85)
T ss_dssp EEEEECCTTSTHHHHHH-----HHHHHHHHHHSSCEE
T ss_pred EEEEEeCCCCCCHHHHH-----HHHHHHHhcCCCceE
Confidence 47889999999999988 44444 56666
No 155
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.49 E-value=0.00057 Score=41.61 Aligned_cols=32 Identities=25% Similarity=0.519 Sum_probs=22.8
Q ss_pred CceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 53 NSVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
..+++|+++|||+|...+.. +.+.++++++++
T Consensus 2 ~~~~~f~~~~C~~C~~~~~~-l~~~~~~~~~~~ 33 (80)
T 2k8s_A 2 ASKAIFYHAGCPVCVSAEQA-VANAIDPSKYTV 33 (80)
T ss_dssp CEEEEEEECSCHHHHHHHHH-HHHHSCTTTEEE
T ss_pred cceEEEeCCCCCchHHHHHH-HHHHHHhcCCeE
Confidence 35789999999999998721 223556666665
No 156
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.49 E-value=0.00099 Score=40.36 Aligned_cols=27 Identities=22% Similarity=0.661 Sum_probs=23.6
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+++|||+|...+ ..|++.++++
T Consensus 2 ~v~~f~~~~C~~C~~~~-----~~l~~~~i~~ 28 (81)
T 1h75_A 2 RITIYTRNDCVQCHATK-----RAMENRGFDF 28 (81)
T ss_dssp CEEEEECTTCHHHHHHH-----HHHHHTTCCC
T ss_pred EEEEEcCCCChhHHHHH-----HHHHHCCCCe
Confidence 47889999999999988 7788888887
No 157
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=96.45 E-value=0.0017 Score=42.05 Aligned_cols=49 Identities=45% Similarity=0.691 Sum_probs=40.2
Q ss_pred ccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEec
Q psy7674 3 DIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHID 51 (164)
Q Consensus 3 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig 51 (164)
.+++++.+.+|.+++++..+++...++.+.+..|..++|++|++|+.++
T Consensus 37 ~~~l~~~~~~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~~~~g~~v~ 85 (116)
T 2e7p_A 37 KQLLTQVGASYKVVELDELSDGSQLQSALAHWTGRGTVPNVFIGGKQIG 85 (116)
T ss_dssp HHHHHHHTCCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEETTEEEE
T ss_pred HHHHHHcCCCeEEEEccCCCChHHHHHHHHHHhCCCCcCEEEECCEEEC
Confidence 3456667788999999998877777888887789999999999998554
No 158
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.43 E-value=0.0023 Score=38.70 Aligned_cols=46 Identities=13% Similarity=0.325 Sum_probs=34.3
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEec
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHID 51 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig 51 (164)
++++|++.+++|..++++.. .+..+.+.+ .|.+++|++|++|+.++
T Consensus 17 ~~~~l~~~~i~~~~vdi~~~---~~~~~~~~~-~g~~~vP~~~~~g~~~~ 62 (81)
T 1h75_A 17 TKRAMENRGFDFEMINVDRV---PEAAEALRA-QGFRQLPVVIAGDLSWS 62 (81)
T ss_dssp HHHHHHHTTCCCEEEETTTC---HHHHHHHHH-TTCCSSCEEEETTEEEE
T ss_pred HHHHHHHCCCCeEEEECCCC---HHHHHHHHH-hCCCccCEEEECCEEEe
Confidence 35667788899999888876 445555544 58899999999987544
No 159
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.40 E-value=0.0022 Score=38.03 Aligned_cols=46 Identities=11% Similarity=0.221 Sum_probs=34.9
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceEec
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHID 51 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ig 51 (164)
+..+|++.+++|..++++.. .+.++.+. ..|.+++|+++++|+.++
T Consensus 17 ~~~~l~~~~i~~~~~di~~~---~~~~~~~~-~~~~~~vP~l~~~g~~~~ 62 (75)
T 1r7h_A 17 TKKALDRAGLAYNTVDISLD---DEARDYVM-ALGYVQAPVVEVDGEHWS 62 (75)
T ss_dssp HHHHHHHTTCCCEEEETTTC---HHHHHHHH-HTTCBCCCEEEETTEEEE
T ss_pred HHHHHHHcCCCcEEEECCCC---HHHHHHHH-HcCCCccCEEEECCeEEc
Confidence 35677888999999998876 45555564 468899999999887543
No 160
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.38 E-value=0.0013 Score=44.06 Aligned_cols=28 Identities=50% Similarity=0.898 Sum_probs=24.3
Q ss_pred CceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 53 NSVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
..+++|+++|||+|+..+ ..|++.++++
T Consensus 27 ~~vvvf~~~~Cp~C~~~~-----~~L~~~~i~~ 54 (130)
T 2cq9_A 27 NCVVIFSKTSCSYCTMAK-----KLFHDMNVNY 54 (130)
T ss_dssp SSEEEEECSSCSHHHHHH-----HHHHHHTCCC
T ss_pred CcEEEEEcCCChHHHHHH-----HHHHHcCCCc
Confidence 357889999999999988 7888888877
No 161
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=96.35 E-value=0.0013 Score=38.96 Aligned_cols=27 Identities=33% Similarity=0.749 Sum_probs=23.6
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+.+|||+|...+ ..|++.++++
T Consensus 2 ~i~~y~~~~C~~C~~~~-----~~l~~~~i~~ 28 (75)
T 1r7h_A 2 SITLYTKPACVQCTATK-----KALDRAGLAY 28 (75)
T ss_dssp CEEEEECTTCHHHHHHH-----HHHHHTTCCC
T ss_pred eEEEEeCCCChHHHHHH-----HHHHHcCCCc
Confidence 46889999999999988 7888888887
No 162
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.34 E-value=0.0013 Score=39.80 Aligned_cols=27 Identities=33% Similarity=0.816 Sum_probs=23.8
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+++|||+|...+ ..+++.++++
T Consensus 2 ~i~~y~~~~C~~C~~~~-----~~l~~~~i~~ 28 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAK-----ALLSSKGVSF 28 (82)
T ss_dssp CEEEEECSSCHHHHHHH-----HHHHHHTCCC
T ss_pred cEEEEECCCChhHHHHH-----HHHHHCCCCc
Confidence 47899999999999988 7888888887
No 163
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.29 E-value=0.0016 Score=40.52 Aligned_cols=27 Identities=30% Similarity=0.882 Sum_probs=24.2
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+++|||+|+..+ ..|++.+++|
T Consensus 7 ~v~ly~~~~C~~C~~~~-----~~L~~~~i~~ 33 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAK-----ALLARKGAEF 33 (92)
T ss_dssp CEEEEECTTCHHHHHHH-----HHHHHTTCCC
T ss_pred cEEEEECCCChhHHHHH-----HHHHHcCCCc
Confidence 57899999999999988 7888889887
No 164
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=96.29 E-value=0.0014 Score=43.02 Aligned_cols=26 Identities=27% Similarity=0.511 Sum_probs=24.5
Q ss_pred eEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 55 VVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
+++|+.++||+|+.++ .+|+++|++|
T Consensus 2 i~iY~~~~C~~C~kak-----~~L~~~gi~~ 27 (114)
T 1rw1_A 2 YVLYGIKACDTMKKAR-----TWLDEHKVAY 27 (114)
T ss_dssp EEEEECSSCHHHHHHH-----HHHHHTTCCE
T ss_pred EEEEECCCChHHHHHH-----HHHHHCCCce
Confidence 6899999999999999 8999999998
No 165
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=96.24 E-value=0.0014 Score=41.05 Aligned_cols=27 Identities=15% Similarity=0.511 Sum_probs=23.7
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+++|||+|...+ ..|++.++++
T Consensus 2 ~vv~f~a~~C~~C~~~~-----~~L~~~~~~~ 28 (87)
T 1ttz_A 2 ALTLYQRDDCHLCDQAV-----EALAQARAGA 28 (87)
T ss_dssp CEEEEECSSCHHHHHHH-----HHHHHTTCCC
T ss_pred EEEEEECCCCchHHHHH-----HHHHHHHHhh
Confidence 47899999999999999 8888888874
No 166
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=96.18 E-value=0.0013 Score=45.12 Aligned_cols=29 Identities=48% Similarity=0.892 Sum_probs=25.3
Q ss_pred CCceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 52 NNSVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 52 ~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
...+++|+++|||+|...+ ..|++.++++
T Consensus 48 ~~~Vvvf~~~~Cp~C~~~k-----~~L~~~~i~~ 76 (146)
T 2ht9_A 48 DNCVVIFSKTSCSYCTMAK-----KLFHDMNVNY 76 (146)
T ss_dssp HCSEEEEECTTCHHHHHHH-----HHHHHHTCCC
T ss_pred CCCEEEEECCCChhHHHHH-----HHHHHcCCCe
Confidence 4568899999999999988 7888888887
No 167
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.09 E-value=0.006 Score=44.85 Aligned_cols=84 Identities=27% Similarity=0.394 Sum_probs=52.7
Q ss_pred hHHHHHHHhhcCCCCcceEEeeceEecCCceEEEeccCCcccccccchhhHHHHhhcCceEEeeEEEEeeCcEEEeCCee
Q psy7674 25 AQIQTALFERTGQKTVPNIFIHGKHIDNNSVVIFSKSWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEE 104 (164)
Q Consensus 25 ~~~~~~l~~~~g~~~vp~v~i~~~~ig~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~v~v~~~~ 104 (164)
...++.|..+.... +....+++|+++|||||.+++ .+|+++|+++ +.+.++.+
T Consensus 153 ~~~~~il~~l~~~~-----------i~~~~i~ly~~~~Cp~C~~a~-----~~L~~~~i~~----------~~~~i~~~- 205 (241)
T 1nm3_A 153 SDADTMLKYLAPQH-----------QVQESISIFTKPGCPFCAKAK-----QLLHDKGLSF----------EEIILGHD- 205 (241)
T ss_dssp SSHHHHHHHHCTTS-----------CCCCCEEEEECSSCHHHHHHH-----HHHHHHTCCC----------EEEETTTT-
T ss_pred cCHHHHHHHhhhhc-----------cccceEEEEECCCChHHHHHH-----HHHHHcCCce----------EEEECCCc-
Confidence 45666666653221 345678999999999999999 8899999987 33444321
Q ss_pred EEEEeceEEEecCCCCCCCCC--CCccceechhhhcc
Q psy7674 105 RTVSAQNFIIAVGGRPTYPDI--PGAHLGITSDDLFS 139 (164)
Q Consensus 105 ~~~~~d~liiAtGs~~~~p~i--~g~~~v~~~~~~~~ 139 (164)
. ..+.+.-.+|. ..+|.+ .| +.+++++++..
T Consensus 206 ~--~~~~l~~~~g~-~~vP~~~~~g-~~i~g~~~i~~ 238 (241)
T 1nm3_A 206 A--TIVSVRAVSGR-TTVPQVFIGG-KHIGGSDDLEK 238 (241)
T ss_dssp C--CHHHHHHHTCC-SSSCEEEETT-EEEESHHHHHH
T ss_pred h--HHHHHHHHhCC-CCcCEEEECC-EEEECHHHHHH
Confidence 1 11333333553 345653 44 67777777654
No 168
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.05 E-value=0.0024 Score=41.66 Aligned_cols=27 Identities=15% Similarity=0.477 Sum_probs=21.8
Q ss_pred ceEEEeccCCcccccccchhhHHHHhh----cCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEK----NKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~----~gv~~ 85 (164)
.+++|+++|||+|...+ ..|++ ++++|
T Consensus 31 ~vv~y~~~~C~~C~~a~-----~~L~~l~~e~~i~~ 61 (107)
T 2fgx_A 31 KLVVYGREGCHLCEEMI-----ASLRVLQKKSWFEL 61 (107)
T ss_dssp CEEEEECSSCHHHHHHH-----HHHHHHHHHSCCCC
T ss_pred EEEEEeCCCChhHHHHH-----HHHHHHHHhcCCeE
Confidence 57899999999999988 44544 67777
No 169
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=95.89 E-value=0.00072 Score=41.29 Aligned_cols=41 Identities=29% Similarity=0.578 Sum_probs=27.6
Q ss_pred CCCccEEEEecCCCChhHHHHHHHhhcC--CCCcceEEeeceEecC
Q psy7674 9 PDYNFQVVELDKLPNGAQIQTALFERTG--QKTVPNIFIHGKHIDN 52 (164)
Q Consensus 9 ~~~~~~~~~i~~~~~~~~~~~~l~~~~g--~~~vp~v~i~~~~ig~ 52 (164)
+++.+..++++..+. . .+.+.+..| ..++|++|++|+.+++
T Consensus 29 ~~i~~~~vdi~~~~~--~-~~~l~~~~~~~~~~vP~i~~~g~~i~~ 71 (85)
T 1ego_A 29 DDFQYQYVDIRAEGI--T-KEDLQQKAGKPVETVPQIFVDQQHIGG 71 (85)
T ss_dssp SSCEEEEECHHHHTC--C-SHHHHHHTCCCSCCSCEEEETTEEEES
T ss_pred CCceEEEEecccChH--H-HHHHHHHhCCCCceeCeEEECCEEEEC
Confidence 567777777765432 1 134555567 7899999999987763
No 170
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=95.85 E-value=0.0029 Score=41.94 Aligned_cols=26 Identities=27% Similarity=0.598 Sum_probs=24.4
Q ss_pred eEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 55 VVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
+++|+.++||+|++++ .+|+++|++|
T Consensus 2 i~iY~~~~C~~c~ka~-----~~L~~~gi~~ 27 (120)
T 3l78_A 2 VTLFLSPSCTSCRKAR-----AWLNRHDVVF 27 (120)
T ss_dssp EEEEECSSCHHHHHHH-----HHHHHTTCCE
T ss_pred EEEEeCCCCHHHHHHH-----HHHHHcCCCe
Confidence 6789999999999999 8999999998
No 171
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.83 E-value=0.025 Score=45.31 Aligned_cols=80 Identities=15% Similarity=0.212 Sum_probs=57.3
Q ss_pred eEEeeceEec----------CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEeeCcEEEe-CCeeEEE
Q psy7674 42 NIFIHGKHID----------NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDKHRVKF-AGEERTV 107 (164)
Q Consensus 42 ~v~i~~~~ig----------~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~~~v~v-~~~~~~~ 107 (164)
.+.|++-.++ +.+++++.+.. .|.........+.+.+++.||+++.+ .+..++...+.+ ++ +.+
T Consensus 150 vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g--~~~ 227 (437)
T 4eqs_A 150 VLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSG--KVE 227 (437)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETTEEEETTS--CEE
T ss_pred EEEECCccchhhhHHHHHhcCCcceeeeeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCCeeeecCC--eEE
Confidence 4455555555 66777776644 33444444556778889999999988 566677777777 55 679
Q ss_pred EeceEEEecCCCCCCC
Q psy7674 108 SAQNFIIAVGGRPTYP 123 (164)
Q Consensus 108 ~~d~liiAtGs~~~~p 123 (164)
.+|.+++|+|.+|+..
T Consensus 228 ~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 228 HYDMIIEGVGTHPNSK 243 (437)
T ss_dssp ECSEEEECCCEEESCG
T ss_pred eeeeEEEEeceecCcH
Confidence 9999999999988653
No 172
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=95.82 E-value=0.0018 Score=51.06 Aligned_cols=79 Identities=25% Similarity=0.339 Sum_probs=48.2
Q ss_pred ecCCceEEEeccCCcccccccchhhHH-HHhhcCceEEeeEEEEeeCcEEEeCCe-eEEEEeceEEEecCCCCCCCC--C
Q psy7674 50 IDNNSVVIFSKSWCPFCTKAKENNYEK-ELEKNKIDYFNAKAVFVDKHRVKFAGE-ERTVSAQNFIIAVGGRPTYPD--I 125 (164)
Q Consensus 50 ig~d~vvv~~~~~cp~~~~~~~~~~~~-~l~~~gv~~~~~~~~~~~~~~v~v~~~-~~~~~~d~liiAtGs~~~~p~--i 125 (164)
+....++||+++|||||.+++ + +|+++++++.. . ..+.++.. ......+.|.-.+| .+.+|. |
T Consensus 258 I~~~~VvVYsk~~CPyC~~Ak-----~~LL~~~gV~y~e--i-----dVlEld~~~~~~e~~~~L~~~tG-~~TVPqVFI 324 (362)
T 2jad_A 258 IAENEIFVASKTYCPYSHAAL-----NTLFEKLKVPRSK--V-----LVLQLNDMKEGADIQAALYEING-QRTVPNIYI 324 (362)
T ss_dssp HHTCSEEEEECTTCHHHHHHH-----HHHHTTTCCCTTT--E-----EEEEGGGSTTHHHHHHHHHHHHC-CCSSCEEEE
T ss_pred hccCCEEEEEcCCCcchHHHH-----HHHHHHcCCCcce--E-----EEEEeccccCCHHHHHHHHHHHC-CCCcCEEEE
Confidence 558899999999999999998 6 68888987611 0 01122110 00011133333356 446776 3
Q ss_pred CCccceechhhhccCcC
Q psy7674 126 PGAHLGITSDDLFSLNK 142 (164)
Q Consensus 126 ~g~~~v~~~~~~~~~~~ 142 (164)
.| +.+++++++..+.+
T Consensus 325 ~G-k~IGG~DdL~~L~~ 340 (362)
T 2jad_A 325 NG-KHIGGNDDLQELRE 340 (362)
T ss_dssp TT-EEEESHHHHHHHHH
T ss_pred CC-EEEEChHHHHHhhh
Confidence 55 78888888776643
No 173
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=95.72 E-value=0.0063 Score=36.76 Aligned_cols=41 Identities=27% Similarity=0.484 Sum_probs=29.8
Q ss_pred cccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeece
Q psy7674 4 IQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGK 48 (164)
Q Consensus 4 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~ 48 (164)
-++++.+.++.++++|.+++.. +.. +..|.+++|+++++|+
T Consensus 24 ~~~~~~~~~~~~~~v~~~~~~~---~~~-~~~gv~~vPt~~i~g~ 64 (80)
T 2k8s_A 24 NAIDPSKYTVEIVHLGTDKARI---AEA-EKAGVKSVPALVIDGA 64 (80)
T ss_dssp HHSCTTTEEEEEEETTTCSSTH---HHH-HHHTCCEEEEEEETTE
T ss_pred HHHHhcCCeEEEEEecCChhhH---HHH-HHcCCCcCCEEEECCE
Confidence 3788888899999998742112 222 3458899999999887
No 174
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=95.65 E-value=0.0034 Score=41.53 Aligned_cols=27 Identities=41% Similarity=0.543 Sum_probs=25.0
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+.++||+|++++ .+|+++|++|
T Consensus 6 ~i~iY~~~~C~~C~ka~-----~~L~~~gi~y 32 (120)
T 2kok_A 6 SVTIYGIKNCDTMKKAR-----IWLEDHGIDY 32 (120)
T ss_dssp CEEEEECSSCHHHHHHH-----HHHHHHTCCE
T ss_pred EEEEEECCCChHHHHHH-----HHHHHcCCcE
Confidence 47899999999999999 8999999998
No 175
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.59 E-value=0.0037 Score=39.84 Aligned_cols=29 Identities=31% Similarity=0.658 Sum_probs=22.4
Q ss_pred CCceEEEeccCCcccccccchhhHHHHh--hcCceE
Q psy7674 52 NNSVVIFSKSWCPFCTKAKENNYEKELE--KNKIDY 85 (164)
Q Consensus 52 ~d~vvv~~~~~cp~~~~~~~~~~~~~l~--~~gv~~ 85 (164)
...+++|+++|||+|...+ ..|+ ..++.|
T Consensus 16 ~~~v~~f~~~~C~~C~~~~-----~~L~~l~~~i~~ 46 (100)
T 1wjk_A 16 LPVLTLFTKAPCPLCDEAK-----EVLQPYKDRFIL 46 (100)
T ss_dssp CCEEEEEECSSCHHHHHHH-----HHTSTTSSSSEE
T ss_pred CCEEEEEeCCCCcchHHHH-----HHHHHhhhCCeE
Confidence 3458889999999999988 6666 345665
No 176
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=95.51 E-value=0.0035 Score=40.47 Aligned_cols=27 Identities=37% Similarity=0.859 Sum_probs=22.0
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|.++|||+|+..+ ..+++.++++
T Consensus 21 ~vv~f~a~~C~~C~~~~-----~~l~~~~~~~ 47 (116)
T 2e7p_A 21 PVVVFSKTYCGYCNRVK-----QLLTQVGASY 47 (116)
T ss_dssp SEEEEECTTCHHHHHHH-----HHHHHHTCCC
T ss_pred CEEEEECCCChhHHHHH-----HHHHHcCCCe
Confidence 56779999999999887 6677777765
No 177
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=95.48 E-value=0.015 Score=49.25 Aligned_cols=53 Identities=17% Similarity=0.151 Sum_probs=38.3
Q ss_pred hHHHHhh-cCceEEeeEEEEe--eCcE---EEe-CCeeEEEEeceEEEecCCCCCCCCCCCc
Q psy7674 74 YEKELEK-NKIDYFNAKAVFV--DKHR---VKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA 128 (164)
Q Consensus 74 ~~~~l~~-~gv~~~~~~~~~~--~~~~---v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~ 128 (164)
+.+.+++ .|++++.++++.+ +... +.+ ++ ..+.+|.+|+|||+.+..+.++|.
T Consensus 130 L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG--~~I~Ad~VVLATGt~s~~~~i~G~ 189 (651)
T 3ces_A 130 VRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMG--LKFRAKAVVLTVGTFLDGKIHIGL 189 (651)
T ss_dssp HHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTS--EEEEEEEEEECCSTTTCCEEECC-
T ss_pred HHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCC--CEEECCEEEEcCCCCccCccccCc
Confidence 4556666 6999987777776 3332 333 44 679999999999999887777774
No 178
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=95.46 E-value=0.0049 Score=41.49 Aligned_cols=27 Identities=30% Similarity=0.641 Sum_probs=24.7
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+.++||+|..++ .+|++.|++|
T Consensus 2 mi~lY~~~~C~~C~ka~-----~~L~~~gi~y 28 (132)
T 1z3e_A 2 MVTLYTSPSCTSCRKAR-----AWLEEHEIPF 28 (132)
T ss_dssp CEEEEECTTCHHHHHHH-----HHHHHTTCCE
T ss_pred eEEEEeCCCChHHHHHH-----HHHHHcCCce
Confidence 36899999999999999 8899999998
No 179
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=94.95 E-value=0.0079 Score=39.88 Aligned_cols=27 Identities=30% Similarity=0.599 Sum_probs=24.9
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
-+.+|..++||+|++++ .+|+++|++|
T Consensus 4 Mi~iY~~~~C~~c~ka~-----~~L~~~gi~~ 30 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAK-----AELDDLAWDY 30 (120)
T ss_dssp SEEEEECSSCHHHHHHH-----HHHHHHTCCE
T ss_pred eEEEEeCCCChHHHHHH-----HHHHHcCCce
Confidence 46789999999999999 8999999998
No 180
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=94.93 E-value=0.0069 Score=40.17 Aligned_cols=27 Identities=37% Similarity=0.621 Sum_probs=24.9
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+.++||+|++++ .+|+++|++|
T Consensus 5 ~i~iY~~p~C~~c~ka~-----~~L~~~gi~~ 31 (120)
T 3gkx_A 5 KTLFLQYPACSTCQKAK-----KWLIENNIEY 31 (120)
T ss_dssp CCEEEECTTCHHHHHHH-----HHHHHTTCCC
T ss_pred EEEEEECCCChHHHHHH-----HHHHHcCCce
Confidence 36889999999999999 8999999998
No 181
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=94.86 E-value=0.007 Score=41.32 Aligned_cols=27 Identities=4% Similarity=0.101 Sum_probs=24.8
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+.++||+|++++ .+|+++|++|
T Consensus 3 ~itiY~~p~C~~crkak-----~~L~~~gi~~ 29 (141)
T 1s3c_A 3 NITIYHNPASGTSRNTL-----EMIRNSGTEP 29 (141)
T ss_dssp CCEEECCTTCHHHHHHH-----HHHHHTTCCC
T ss_pred cEEEEECCCChHHHHHH-----HHHHHcCCCE
Confidence 46899999999999999 8999999987
No 182
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=94.76 E-value=0.0074 Score=40.08 Aligned_cols=26 Identities=19% Similarity=0.313 Sum_probs=24.5
Q ss_pred eEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 55 VVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
+++|+.++||+|++++ .+|+++|++|
T Consensus 7 i~iY~~p~C~~c~ka~-----~~L~~~gi~~ 32 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETL-----ALVEQQGITP 32 (121)
T ss_dssp CEEECCTTCHHHHHHH-----HHHHTTTCCC
T ss_pred EEEEECCCCHHHHHHH-----HHHHHcCCCc
Confidence 7899999999999999 8999999998
No 183
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=94.61 E-value=0.007 Score=46.42 Aligned_cols=122 Identities=12% Similarity=0.013 Sum_probs=71.3
Q ss_pred HHHHHhhcCCCCcceEEeeceEec------------CCceEEEeccC-------Cccccccc---chhhHHHHhhcCceE
Q psy7674 28 QTALFERTGQKTVPNIFIHGKHID------------NNSVVIFSKSW-------CPFCTKAK---ENNYEKELEKNKIDY 85 (164)
Q Consensus 28 ~~~l~~~~g~~~vp~v~i~~~~ig------------~d~vvv~~~~~-------cp~~~~~~---~~~~~~~l~~~gv~~ 85 (164)
++++..+......-.+.|++-+.| +-++++|.+.. ++.|+..+ ......++++.|+++
T Consensus 54 ~~~~~~~~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~ 133 (326)
T 3fpz_A 54 SRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPY 133 (326)
T ss_dssp HHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCC
T ss_pred HHHHhhhhhccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEE
Confidence 334444444555667777775444 45788888743 23344333 234556778889987
Q ss_pred EeeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCCCCCCCCcc--ceechhhhc---cCcCCCCcEEEECCcHHHHHhh
Q psy7674 86 FNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGAH--LGITSDDLF---SLNKDPGKVLLVGASYIALECA 160 (164)
Q Consensus 86 ~~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~~p~i~g~~--~v~~~~~~~---~~~~~~~~vvViGgG~~g~E~A 160 (164)
... +. .....+..+++++..++.+.++|.+ ......++. ......++++++|+|++++|.|
T Consensus 134 ~~~------------~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a 199 (326)
T 3fpz_A 134 EDE------------GD--YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQA 199 (326)
T ss_dssp EEC------------SS--EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTC
T ss_pred EEC------------Cc--ceecceeEEEEcchhhhccccccceeecccccceeeccCCcccCCCEEEEEccCceeeehh
Confidence 532 11 2334455666777777777788751 111111111 1123458999999999999999
Q ss_pred ccc
Q psy7674 161 GCD 163 (164)
Q Consensus 161 ~~l 163 (164)
..+
T Consensus 200 ~~~ 202 (326)
T 3fpz_A 200 HGT 202 (326)
T ss_dssp TTS
T ss_pred hhh
Confidence 765
No 184
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.58 E-value=0.075 Score=42.55 Aligned_cols=71 Identities=17% Similarity=0.249 Sum_probs=47.4
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEee--CcEEEe---CCeeEEEEeceEEEecCCCCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD--KHRVKF---AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~~v~v---~~~~~~~~~d~liiAtGs~~~~p 123 (164)
+..++++.+.. .|+........+.+.+++.|++++.+ ++..++ ...+.+ ++ ..+.+|.+++|||.+|+.+
T Consensus 190 g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 190 GAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGG--EVLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTS--CEEEESEEEECSCEEECCT
T ss_pred CCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCC--eEEEcCEEEECcCCCcCCC
Confidence 45667776543 34333333445667788899999987 555554 333433 34 6799999999999998875
Q ss_pred C
Q psy7674 124 D 124 (164)
Q Consensus 124 ~ 124 (164)
.
T Consensus 268 ~ 268 (455)
T 2yqu_A 268 G 268 (455)
T ss_dssp T
T ss_pred C
Confidence 4
No 185
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=94.28 E-value=0.2 Score=39.98 Aligned_cols=84 Identities=19% Similarity=0.198 Sum_probs=53.4
Q ss_pred cceEEeeceEec----------CCceEEEeccCCc---ccccccchhhHHHHhhcCceEEee-EEEEeeCc----EEEeC
Q psy7674 40 VPNIFIHGKHID----------NNSVVIFSKSWCP---FCTKAKENNYEKELEKNKIDYFNA-KAVFVDKH----RVKFA 101 (164)
Q Consensus 40 vp~v~i~~~~ig----------~d~vvv~~~~~cp---~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~~----~v~v~ 101 (164)
-..+.|++-.+| +..++++.+...+ +........+.+.+++.|++++.+ .+..++.. .+..+
T Consensus 150 ~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~ 229 (447)
T 1nhp_A 150 NNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTD 229 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEEC
Confidence 344556665455 5577777765422 222222345567788899999987 45556432 23345
Q ss_pred CeeEEEEeceEEEecCCCCCCCCC
Q psy7674 102 GEERTVSAQNFIIAVGGRPTYPDI 125 (164)
Q Consensus 102 ~~~~~~~~d~liiAtGs~~~~p~i 125 (164)
+ ..+.+|.+++|+|.+|+.+.+
T Consensus 230 ~--~~i~~d~vi~a~G~~p~~~~~ 251 (447)
T 1nhp_A 230 K--NAYDADLVVVAVGVRPNTAWL 251 (447)
T ss_dssp S--CEEECSEEEECSCEEESCGGG
T ss_pred C--CEEECCEEEECcCCCCChHHH
Confidence 5 579999999999999876543
No 186
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.17 E-value=0.071 Score=42.84 Aligned_cols=73 Identities=16% Similarity=0.156 Sum_probs=48.0
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPD 124 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~~p~ 124 (164)
+.+++++.+.. .|+..+.....+.+.+++.||+++.+ .+..++...+.+ +++...+.+|.+++|||.+|+.+.
T Consensus 194 g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 194 GAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCEECCSCEEECCCEEECCSS
T ss_pred CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEEEECCEEEECcCCCcCCCC
Confidence 55677776543 33333333345567788899999987 566665432444 232257999999999999988754
No 187
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=94.14 E-value=0.012 Score=38.83 Aligned_cols=27 Identities=30% Similarity=0.362 Sum_probs=24.7
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+.+|..++|++|++++ .+|+++|++|
T Consensus 5 ~i~iY~~p~C~~c~ka~-----~~L~~~gi~~ 31 (119)
T 3f0i_A 5 SVVIYHNPKCSKSRETL-----ALLENQGIAP 31 (119)
T ss_dssp CCEEECCTTCHHHHHHH-----HHHHHTTCCC
T ss_pred EEEEEECCCChHHHHHH-----HHHHHcCCce
Confidence 36889999999999999 8999999987
No 188
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=93.95 E-value=0.025 Score=45.82 Aligned_cols=50 Identities=12% Similarity=0.141 Sum_probs=34.2
Q ss_pred hHHHHhhcCceEEeeE-EEEe--eCcEE---Ee-CCeeEEEEeceEEEecCCCCCCCCC
Q psy7674 74 YEKELEKNKIDYFNAK-AVFV--DKHRV---KF-AGEERTVSAQNFIIAVGGRPTYPDI 125 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~-~~~~--~~~~v---~v-~~~~~~~~~d~liiAtGs~~~~p~i 125 (164)
+.+.+++.|++++.++ + .+ +...+ .+ +.+ ..+.+|.+|+|||+.+..+++
T Consensus 125 L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~-g~~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 125 LLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRG-LVEDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp HHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTE-EECCCSEEEECCCCCGGGSSS
T ss_pred HHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCC-CeEEeeeEEECCCCCcccCcc
Confidence 4455667899999885 5 54 33433 33 222 357799999999999877664
No 189
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.95 E-value=0.11 Score=39.14 Aligned_cols=74 Identities=12% Similarity=0.121 Sum_probs=43.6
Q ss_pred CCceEEEeccCCcccccccchhhHHHHhhcCceEEee-EEEEeeCc--E---EEe-C----CeeEEEEeceEEEecCCCC
Q psy7674 52 NNSVVIFSKSWCPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDKH--R---VKF-A----GEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 52 ~d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~~--~---v~v-~----~~~~~~~~d~liiAtGs~~ 120 (164)
...++++.+...+.........+.+.+++.||+++.+ .+..++.. . +.+ + ++...+.+|.+++|+|.+|
T Consensus 168 g~~Vtlv~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 168 ASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp SSEEEEECSSSSCCCCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred CCeEEEEEeCCccccCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 3455666654333211111223445667789999987 55555321 1 444 3 4335799999999999988
Q ss_pred CCCCC
Q psy7674 121 TYPDI 125 (164)
Q Consensus 121 ~~p~i 125 (164)
....+
T Consensus 248 ~~~~~ 252 (320)
T 1trb_A 248 NTAIF 252 (320)
T ss_dssp SCGGG
T ss_pred ChHHh
Confidence 75433
No 190
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=93.84 E-value=0.1 Score=38.56 Aligned_cols=48 Identities=15% Similarity=0.125 Sum_probs=37.2
Q ss_pred hHHHHhhcCceEEeeEEEEeeCc-EEEe-CCeeEEEEeceEEEecCCCCCCC
Q psy7674 74 YEKELEKNKIDYFNAKAVFVDKH-RVKF-AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~~~-~v~v-~~~~~~~~~d~liiAtGs~~~~p 123 (164)
+.+.+++.||+++...+..++.. .+.+ ++ +.+.+|.+++|+|.+|..+
T Consensus 180 ~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g--~~~~~D~vi~a~G~~p~~~ 229 (297)
T 3fbs_A 180 QHALLAARGVRVETTRIREIAGHADVVLADG--RSIALAGLFTQPKLRITVD 229 (297)
T ss_dssp HHHHHHHTTCEEECSCEEEEETTEEEEETTS--CEEEESEEEECCEEECCCS
T ss_pred HHHHHHHCCcEEEcceeeeeecCCeEEeCCC--CEEEEEEEEEccCcccCch
Confidence 55778889999987666667654 5666 55 6799999999999988754
No 191
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=93.77 E-value=0.15 Score=40.20 Aligned_cols=69 Identities=9% Similarity=0.017 Sum_probs=46.6
Q ss_pred CCceEEEeccCCcc---cccccchhhHHHHhhcCceEEee-EEEEeeCcEEEe-CCeeEEEEeceEEEecCCCCCC
Q psy7674 52 NNSVVIFSKSWCPF---CTKAKENNYEKELEKNKIDYFNA-KAVFVDKHRVKF-AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 52 ~d~vvv~~~~~cp~---~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~~~v~v-~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+..++++.+..-+. ........+.+.+++.||+++.+ .+..++...+.+ ++ +.+.+|.+++|+|.+|+.
T Consensus 168 g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g--~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 168 GVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDG--TRIAADMVVVGIGVLAND 241 (408)
T ss_dssp TCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEETTEEEETTS--CEEECSEEEECSCEEECC
T ss_pred CCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEECCEEEECCC--CEEEcCEEEECcCCCccH
Confidence 45677777643221 22222344567788999999988 555565335666 55 679999999999998875
No 192
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.68 E-value=0.16 Score=42.07 Aligned_cols=80 Identities=8% Similarity=0.074 Sum_probs=51.4
Q ss_pred eEEeeceEec----------CCceEEEeccC-CcccccccchhhHHHHhhcCceEEeeE-EEEee--CcEEEe---CCee
Q psy7674 42 NIFIHGKHID----------NNSVVIFSKSW-CPFCTKAKENNYEKELEKNKIDYFNAK-AVFVD--KHRVKF---AGEE 104 (164)
Q Consensus 42 ~v~i~~~~ig----------~d~vvv~~~~~-cp~~~~~~~~~~~~~l~~~gv~~~~~~-~~~~~--~~~v~v---~~~~ 104 (164)
.+.|++-.|| +-.++++.++. .|.........+.+.|++.|++++.+. +..+. ...+.+ ++
T Consensus 226 lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~-- 303 (542)
T 4b1b_A 226 TLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDK-- 303 (542)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTS--
T ss_pred EEEECCCHHHHHHHHHHHhcCCeEEEecccccccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCC--
Confidence 4566665566 55666666543 333333334456788899999999883 44432 333333 34
Q ss_pred EEEEeceEEEecCCCCCCC
Q psy7674 105 RTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 105 ~~~~~d~liiAtGs~~~~p 123 (164)
..+.+|.+++|+|-+|+.-
T Consensus 304 ~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 304 TSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp CEEEESEEEECSCEEESCG
T ss_pred CeEEEEEEEEcccccCCcc
Confidence 5678999999999888764
No 193
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=93.67 E-value=0.24 Score=40.11 Aligned_cols=82 Identities=16% Similarity=0.156 Sum_probs=53.1
Q ss_pred cceEEeeceEec----------CCceEEEeccC--Cc-ccccccchhhHHHHhhcCceEEee-EEEEeeCc----EEEeC
Q psy7674 40 VPNIFIHGKHID----------NNSVVIFSKSW--CP-FCTKAKENNYEKELEKNKIDYFNA-KAVFVDKH----RVKFA 101 (164)
Q Consensus 40 vp~v~i~~~~ig----------~d~vvv~~~~~--cp-~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~~----~v~v~ 101 (164)
-..++|++-.++ ...++++.+.. .| .........+.+.+++.||+++.+ .+..++.. .+.++
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~~ 274 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIITD 274 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEES
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEEC
Confidence 345666665555 55777777643 22 222223344567788899999987 45555421 24445
Q ss_pred CeeEEEEeceEEEecCCCCCCC
Q psy7674 102 GEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 102 ~~~~~~~~d~liiAtGs~~~~p 123 (164)
+ ..+.+|.+++|+|.+|+.+
T Consensus 275 g--~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 275 K--NEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp S--CEEECSEEEECCCEEECCG
T ss_pred C--cEEECCEEEECCCCCcChH
Confidence 5 6799999999999988754
No 194
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=93.45 E-value=0.11 Score=35.93 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=34.4
Q ss_pred hhhHHHHhhcCceEEeeEEEEee--Cc--EEEeCCeeEEEEeceEEEecCCCCCC
Q psy7674 72 NNYEKELEKNKIDYFNAKAVFVD--KH--RVKFAGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 72 ~~~~~~l~~~gv~~~~~~~~~~~--~~--~v~v~~~~~~~~~d~liiAtGs~~~~ 122 (164)
..+.+.+++.|++++.++++.++ .. .+.+++ ..+.+|.+|+|||.+|.+
T Consensus 60 ~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~--g~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 60 RRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEE--GVEKAERLLLCTHKDPTL 112 (180)
T ss_dssp HHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSS--CEEEEEEEEECCTTCCHH
T ss_pred HHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECC--CEEEECEEEECCCCCCCc
Confidence 34567788889999888555553 22 233333 278999999999999854
No 195
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=93.41 E-value=0.082 Score=33.38 Aligned_cols=42 Identities=19% Similarity=0.353 Sum_probs=26.0
Q ss_pred cccccCC--CCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceE
Q psy7674 2 VDIQTAP--PDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKH 49 (164)
Q Consensus 2 ~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ 49 (164)
++++|++ .++.|..++++...+ ..+.+..| +++|++|++|+.
T Consensus 33 ~~~~L~~l~~~i~~~~vdi~~~~~-----~el~~~~g-~~vP~l~~~g~~ 76 (100)
T 1wjk_A 33 AKEVLQPYKDRFILQEVDITLPEN-----STWYERYK-FDIPVFHLNGQF 76 (100)
T ss_dssp HHHHTSTTSSSSEEEEEETTSSTT-----HHHHHHSS-SSCSEEEESSSE
T ss_pred HHHHHHHhhhCCeEEEEECCCcch-----HHHHHHHC-CCCCEEEECCEE
Confidence 4556663 346666666662121 33444568 999999999873
No 196
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=93.20 E-value=0.16 Score=40.43 Aligned_cols=49 Identities=14% Similarity=0.215 Sum_probs=38.3
Q ss_pred hhHHHHhhcCceEEee-EEEEeeCcEEEe---CCeeEEEEeceEEEecCCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~~~~v~v---~~~~~~~~~d~liiAtGs~~~ 121 (164)
.+++.++++||+++.+ .+..++...+.+ +++.+++.+|.+++++|.+|.
T Consensus 205 ~l~~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~ 257 (430)
T 3hyw_A 205 LVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECC
T ss_pred HHHHHHHhCCeEEEeCceEEEEeCCceEEEeeCCCceEeecceEEEeccCCCc
Confidence 4567788999999998 566787776665 444568999999999997764
No 197
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=93.02 E-value=0.052 Score=32.35 Aligned_cols=17 Identities=35% Similarity=0.938 Sum_probs=14.5
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.+++|..+|||+|....
T Consensus 5 ~vv~f~~~~C~~C~~~~ 21 (85)
T 1fo5_A 5 KIELFTSPMCPHCPAAK 21 (85)
T ss_dssp EEEEEECCCSSCCCTHH
T ss_pred EEEEEeCCCCCchHHHH
Confidence 36779999999999876
No 198
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.99 E-value=0.25 Score=39.49 Aligned_cols=73 Identities=22% Similarity=0.319 Sum_probs=46.2
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEee--CcEE--Ee--CCeeEEEEeceEEEecCCCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD--KHRV--KF--AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~~v--~v--~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+.+++++.+.. .|.........+.+.+++.||+++.+ .+..++ ...+ .+ +++...+.+|.+++|+|.+|+.
T Consensus 193 g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 193 GTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp TCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESC
T ss_pred CCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCccc
Confidence 55677777643 23222222334567788899999987 455553 2223 32 2334679999999999999876
Q ss_pred CC
Q psy7674 123 PD 124 (164)
Q Consensus 123 p~ 124 (164)
..
T Consensus 273 ~~ 274 (455)
T 1ebd_A 273 DE 274 (455)
T ss_dssp SS
T ss_pred Cc
Confidence 43
No 199
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=92.90 E-value=0.051 Score=32.39 Aligned_cols=18 Identities=33% Similarity=0.907 Sum_probs=15.2
Q ss_pred ceEEEeccCCcccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAKE 71 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~ 71 (164)
.+++|..+|||+|.....
T Consensus 4 ~vv~f~~~~C~~C~~~~~ 21 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIE 21 (85)
T ss_dssp CEEEESCSSSCCSTTHHH
T ss_pred EEEEEECCCCcchHHHHH
Confidence 467899999999998763
No 200
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=92.89 E-value=0.19 Score=41.56 Aligned_cols=79 Identities=14% Similarity=0.247 Sum_probs=51.3
Q ss_pred eEEeeceEec----------CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEeeC--cEEEe-CCeeE
Q psy7674 42 NIFIHGKHID----------NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDK--HRVKF-AGEER 105 (164)
Q Consensus 42 ~v~i~~~~ig----------~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~--~~v~v-~~~~~ 105 (164)
.++|++..++ +..++++.+.. .|.........+.+.+++.||+++.+ .+..++. ..+.+ ++ +
T Consensus 190 vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g--~ 267 (588)
T 3ics_A 190 ATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSG--S 267 (588)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTS--C
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCC--C
Confidence 4556655454 55667776543 22212222334567788899999987 4555643 45666 45 6
Q ss_pred EEEeceEEEecCCCCCC
Q psy7674 106 TVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 106 ~~~~d~liiAtGs~~~~ 122 (164)
.+.+|.+++|||.+|+.
T Consensus 268 ~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 268 VIQTDMLILAIGVQPES 284 (588)
T ss_dssp EEECSEEEECSCEEECC
T ss_pred EEEcCEEEEccCCCCCh
Confidence 79999999999988875
No 201
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=92.85 E-value=0.15 Score=40.04 Aligned_cols=66 Identities=15% Similarity=0.090 Sum_probs=45.1
Q ss_pred ceEEEeccC-CcccccccchhhHHHHhhcCceEEee-EEEEeeCcEEEe-CCeeEEEEeceEEEecCCCCC
Q psy7674 54 SVVIFSKSW-CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDKHRVKF-AGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 54 ~vvv~~~~~-cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~~~v~v-~~~~~~~~~d~liiAtGs~~~ 121 (164)
.++++.... .|...+.....+.+.+++.||+++.+ .++.++.+.+.+ ++ +.+.+|.+++|+|.+|.
T Consensus 203 ~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g--~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 203 HVTVFSPGEYLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKG--NTIPADITILLPPYTGN 271 (409)
T ss_dssp EEEEECSSSSSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTS--CEEECSEEEEECCEECC
T ss_pred EEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCC--CEEeeeEEEECCCCCcc
Confidence 455565543 12111222334567788999999987 567787777776 55 67999999999998764
No 202
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.69 E-value=0.32 Score=39.49 Aligned_cols=70 Identities=21% Similarity=0.298 Sum_probs=44.4
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEeeC---c--EEEe-CCeeEE-EEeceEEEecCCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDK---H--RVKF-AGEERT-VSAQNFIIAVGGRPT 121 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~---~--~v~v-~~~~~~-~~~d~liiAtGs~~~ 121 (164)
+..++++.+.. .|...+.....+.+.+++.||+++.+ .+..++. . .+.+ ++ +. +.+|.+++|+|.+|+
T Consensus 199 g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g--~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 199 GIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDG--RIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTS--CEEEEESEEEECCCBCCT
T ss_pred CCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCC--cEEEECCEEEECCCCCcC
Confidence 44566666533 22222222334567788999999988 4555532 2 3444 45 45 899999999999987
Q ss_pred CC
Q psy7674 122 YP 123 (164)
Q Consensus 122 ~p 123 (164)
..
T Consensus 277 ~~ 278 (500)
T 1onf_A 277 TE 278 (500)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 203
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=92.65 E-value=0.21 Score=39.94 Aligned_cols=70 Identities=14% Similarity=0.158 Sum_probs=45.9
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEeeC---c--EEEe-CCeeEEEEeceEEEecCCCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDK---H--RVKF-AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~---~--~v~v-~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+..++++.+.. .|...+.....+.+.+++.|++++.+ .+..++. . .+.+ ++ +.+.+|.+++|+|.+|+.
T Consensus 190 g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g--~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 190 GAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDG--RSETVDCLIWAIGREPAN 267 (450)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTS--CEEEESEEEECSCEEESC
T ss_pred CCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCC--cEEEcCEEEECCCCCcCC
Confidence 55677777643 23222222334567788899999988 4555532 2 3444 45 579999999999999876
Q ss_pred C
Q psy7674 123 P 123 (164)
Q Consensus 123 p 123 (164)
.
T Consensus 268 ~ 268 (450)
T 1ges_A 268 D 268 (450)
T ss_dssp T
T ss_pred C
Confidence 4
No 204
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=92.60 E-value=0.21 Score=40.19 Aligned_cols=73 Identities=14% Similarity=0.202 Sum_probs=45.8
Q ss_pred CCceEEEeccCC--c-ccccccchhhHHHHhhcCceEEee-EEEEee--Cc---EEEe----CCeeEEEEeceEEEecCC
Q psy7674 52 NNSVVIFSKSWC--P-FCTKAKENNYEKELEKNKIDYFNA-KAVFVD--KH---RVKF----AGEERTVSAQNFIIAVGG 118 (164)
Q Consensus 52 ~d~vvv~~~~~c--p-~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~---~v~v----~~~~~~~~~d~liiAtGs 118 (164)
+..++++.+..- | .........+.+.+++.||+++.+ .+..++ .. .+.+ ++++..+.+|.+++|+|.
T Consensus 201 g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 201 GADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGR 280 (474)
T ss_dssp TCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCE
T ss_pred CCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCC
Confidence 556777766432 2 222222334567788999999988 455553 21 2332 233367999999999999
Q ss_pred CCCCCC
Q psy7674 119 RPTYPD 124 (164)
Q Consensus 119 ~~~~p~ 124 (164)
+|+...
T Consensus 281 ~p~~~~ 286 (474)
T 1zmd_A 281 RPFTKN 286 (474)
T ss_dssp EECCTT
T ss_pred CcCCCc
Confidence 987643
No 205
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=92.58 E-value=0.25 Score=39.75 Aligned_cols=70 Identities=11% Similarity=0.101 Sum_probs=44.9
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEeeC--c--EEEe-CCeeE-EEEeceEEEecCCCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDK--H--RVKF-AGEER-TVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~--~--~v~v-~~~~~-~~~~d~liiAtGs~~~~ 122 (164)
+.+++++.+.. .+.........+.+.+++.||+++.+ .+..++. . .+.+ ++ + .+.+|.+++|||.+|+.
T Consensus 189 G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G--~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 189 GSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDG--TRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTC--CEEEEESEEEECSCEEESC
T ss_pred CCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCC--cEEEEcCEEEECCCCCcCC
Confidence 45667776543 22111122334567788899999988 4555542 2 3444 45 4 79999999999999876
Q ss_pred C
Q psy7674 123 P 123 (164)
Q Consensus 123 p 123 (164)
.
T Consensus 267 ~ 267 (463)
T 2r9z_A 267 R 267 (463)
T ss_dssp T
T ss_pred C
Confidence 4
No 206
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.43 E-value=0.2 Score=40.69 Aligned_cols=73 Identities=16% Similarity=0.260 Sum_probs=44.3
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEee--CcEEEe-CCeeEEEEeceEEEecCCCCCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD--KHRVKF-AGEERTVSAQNFIIAVGGRPTYPD 124 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~~v~v-~~~~~~~~~d~liiAtGs~~~~p~ 124 (164)
+..++++.+.. .|.........+.+.+++.||+++.+ .+..++ ...+.+ .+++..+.+|.+++|+|.+|+...
T Consensus 205 g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 205 GVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSG 283 (499)
T ss_dssp TCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSS
T ss_pred CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCc
Confidence 44566665543 22211222334567788999999987 455553 222333 111257999999999999987643
No 207
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=92.35 E-value=0.22 Score=39.97 Aligned_cols=84 Identities=25% Similarity=0.308 Sum_probs=52.1
Q ss_pred ceEEeeceEec----------CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEee--CcE--EEe--C
Q psy7674 41 PNIFIHGKHID----------NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD--KHR--VKF--A 101 (164)
Q Consensus 41 p~v~i~~~~ig----------~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~~--v~v--~ 101 (164)
..++|++-.+| +.+++++.+.. .|.........+.+.+++.||+++.+ ++..++ ... +.+ +
T Consensus 171 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~ 250 (464)
T 2eq6_A 171 RLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPA 250 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEET
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeec
Confidence 34555654444 45677777643 22222222334567788899999988 455554 222 333 3
Q ss_pred --CeeEEEEeceEEEecCCCCCCCC
Q psy7674 102 --GEERTVSAQNFIIAVGGRPTYPD 124 (164)
Q Consensus 102 --~~~~~~~~d~liiAtGs~~~~p~ 124 (164)
++...+.+|.+++|+|.+|+.+.
T Consensus 251 ~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 251 EGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp TCCSCEEEEESEEEECSCEEESCTT
T ss_pred CCCceeEEEcCEEEECCCcccCCCC
Confidence 42237999999999999988754
No 208
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.29 E-value=0.28 Score=39.30 Aligned_cols=73 Identities=19% Similarity=0.198 Sum_probs=46.2
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEee--Cc--EEEe--CCeeEEEEeceEEEecCCCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD--KH--RVKF--AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~--~v~v--~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+.+++++.+.. .|.........+.+.+++.||+++.+ .+..++ .. .+.+ +++...+.+|.+++|+|.+|+.
T Consensus 194 g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 194 GVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred CCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 45677777643 22222222334567788899999987 455553 22 2333 3433578999999999999876
Q ss_pred CC
Q psy7674 123 PD 124 (164)
Q Consensus 123 p~ 124 (164)
..
T Consensus 274 ~~ 275 (464)
T 2a8x_A 274 EG 275 (464)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 209
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=92.28 E-value=0.067 Score=40.41 Aligned_cols=24 Identities=29% Similarity=0.528 Sum_probs=19.8
Q ss_pred CceEEEeccCCcccccccchhhHHHHhhc
Q psy7674 53 NSVVIFSKSWCPFCTKAKENNYEKELEKN 81 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~~~~~~~~l~~~ 81 (164)
-.+.+|+.++||||.+++ .+|++.
T Consensus 44 ~~VelyTs~gCp~C~~Ak-----~lL~~~ 67 (270)
T 2axo_A 44 GVVELFTSQGCASCPPAD-----EALRKM 67 (270)
T ss_dssp CEEEEEECTTCTTCHHHH-----HHHHHH
T ss_pred cEEEEEeCCCCCChHHHH-----HHHHHh
Confidence 367889999999999999 566555
No 210
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=92.25 E-value=0.25 Score=40.38 Aligned_cols=71 Identities=4% Similarity=0.130 Sum_probs=44.9
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEee---Cc-----EEEeCCeeE-EEEeceEEEecCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD---KH-----RVKFAGEER-TVSAQNFIIAVGGR 119 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~---~~-----~v~v~~~~~-~~~~d~liiAtGs~ 119 (164)
+..++++.+.. .|.........+.+.+++.||+++.+ .+..++ .. .+.+++. + .+.+|.+++|+|.+
T Consensus 237 G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G-~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 237 GRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNG-EMRIETDFVFLGLGEQ 315 (523)
T ss_dssp TCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTE-EEEEECSCEEECCCCE
T ss_pred CCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCC-cEEEEcCEEEECcCCc
Confidence 45666766543 22222222345567788999999988 555553 22 2333331 4 79999999999999
Q ss_pred CCCC
Q psy7674 120 PTYP 123 (164)
Q Consensus 120 ~~~p 123 (164)
|+..
T Consensus 316 p~~~ 319 (523)
T 1mo9_A 316 PRSA 319 (523)
T ss_dssp ECCH
T ss_pred cCCc
Confidence 8764
No 211
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=92.12 E-value=0.3 Score=39.43 Aligned_cols=81 Identities=12% Similarity=0.181 Sum_probs=51.3
Q ss_pred ceEEeeceEec----------CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEeeC---c---EEEe-
Q psy7674 41 PNIFIHGKHID----------NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDK---H---RVKF- 100 (164)
Q Consensus 41 p~v~i~~~~ig----------~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~---~---~v~v- 100 (164)
..+.|++-.++ +..++++.+.. +|...+.....+.+.+++.||+++.+ .+..++. . .+.+
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~ 266 (479)
T 2hqm_A 187 KVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMN 266 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEET
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEEC
Confidence 34555655455 45677776543 33222223344567788899999988 4555532 1 3444
Q ss_pred CCeeEEEEeceEEEecCCCCCC
Q psy7674 101 AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 101 ~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+++ ..+.+|.+++|+|.+|+.
T Consensus 267 ~G~-~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 267 DSK-SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp TSC-EEEEESEEEECSCEEECC
T ss_pred CCc-EEEEcCEEEECCCCCCcc
Confidence 332 478999999999998876
No 212
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.12 E-value=0.31 Score=36.82 Aligned_cols=51 Identities=14% Similarity=0.165 Sum_probs=35.3
Q ss_pred hhHHHHhhcCceEEee-EEEEeeCc----EEEe----CCeeEEEEeceEEEecCCCCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVDKH----RVKF----AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~~~----~v~v----~~~~~~~~~d~liiAtGs~~~~p 123 (164)
.+.+.+++.||+++.+ .+..++.. .+.+ +++...+.+|.+++|+|.+|..+
T Consensus 196 ~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 255 (335)
T 2zbw_A 196 ELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLG 255 (335)
T ss_dssp HHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECG
T ss_pred HHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCch
Confidence 3455667779999988 45555422 3544 34335789999999999988753
No 213
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.12 E-value=0.56 Score=35.88 Aligned_cols=51 Identities=22% Similarity=0.391 Sum_probs=35.4
Q ss_pred hhHHHHhhcCceEEee-EEEEeeC--c---EEEe---CCeeEEEEeceEEEecCCCCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVDK--H---RVKF---AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~~--~---~v~v---~~~~~~~~~d~liiAtGs~~~~p 123 (164)
.+.+.+++.||+++.+ .+..++. . .+.+ +++...+.+|.+++|+|.+|...
T Consensus 207 ~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 266 (360)
T 3ab1_A 207 EVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLG 266 (360)
T ss_dssp SSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCG
T ss_pred HHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHH
Confidence 3456677789999988 5555542 2 3444 34335789999999999888653
No 214
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=92.05 E-value=0.25 Score=38.95 Aligned_cols=69 Identities=16% Similarity=0.232 Sum_probs=44.3
Q ss_pred CCceEEEeccCCccc---ccccchhhHHHHhhcCceEEee-EEEEeeC---c--EEEe-CCeeEEEEeceEEEecCCCCC
Q psy7674 52 NNSVVIFSKSWCPFC---TKAKENNYEKELEKNKIDYFNA-KAVFVDK---H--RVKF-AGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 52 ~d~vvv~~~~~cp~~---~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~---~--~v~v-~~~~~~~~~d~liiAtGs~~~ 121 (164)
...++++.+..-+.. .......+.+.+++.||+++.+ .+..+.. + .+.+ ++ +.+.+|.+|+|+|.+|+
T Consensus 175 g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG--~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 175 GVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDG--SVIPADIVIVGIGIVPC 252 (415)
T ss_dssp TCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSS--CEEECSEEEECSCCEES
T ss_pred CCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCC--CEEEcCEEEECCCCccC
Confidence 456666665443211 1122334567788899999987 4555532 2 2444 55 67999999999999987
Q ss_pred C
Q psy7674 122 Y 122 (164)
Q Consensus 122 ~ 122 (164)
.
T Consensus 253 ~ 253 (415)
T 3lxd_A 253 V 253 (415)
T ss_dssp C
T ss_pred h
Confidence 5
No 215
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=92.05 E-value=0.2 Score=39.55 Aligned_cols=69 Identities=19% Similarity=0.120 Sum_probs=44.0
Q ss_pred CCceEEEeccCCccc---ccccchhhHHHHhhcCceEEee-EEEEeeCc----EEEe-CCeeEEEEeceEEEecCCCCCC
Q psy7674 52 NNSVVIFSKSWCPFC---TKAKENNYEKELEKNKIDYFNA-KAVFVDKH----RVKF-AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 52 ~d~vvv~~~~~cp~~---~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~~----~v~v-~~~~~~~~~d~liiAtGs~~~~ 122 (164)
...++++.+...+.. .......+.+.+++.||+++.+ .+..++.. .+.+ ++ +.+.+|.+++|+|.+|+.
T Consensus 166 g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg--~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 166 GLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDG--RSFVADSALICVGAEPAD 243 (410)
T ss_dssp TCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTS--CEEECSEEEECSCEEECC
T ss_pred CCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCC--CEEEcCEEEEeeCCeecH
Confidence 445555555432211 1112334567788899999977 45555432 3555 55 689999999999998875
No 216
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=92.03 E-value=0.55 Score=37.66 Aligned_cols=72 Identities=22% Similarity=0.344 Sum_probs=44.8
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEee--CcE--EEe-CCe-eEEEEeceEEEecCCCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD--KHR--VKF-AGE-ERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~~--v~v-~~~-~~~~~~d~liiAtGs~~~~ 122 (164)
+..++++.+.. .|.........+.+.+++.||+++.+ .+..++ ... +.+ +++ ...+.+|.+++|+|.+|+.
T Consensus 203 g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 203 GAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp TCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred CCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 44566666543 23222223345567788899999987 455553 222 333 322 2578999999999998876
Q ss_pred C
Q psy7674 123 P 123 (164)
Q Consensus 123 p 123 (164)
.
T Consensus 283 ~ 283 (476)
T 3lad_A 283 T 283 (476)
T ss_dssp T
T ss_pred C
Confidence 4
No 217
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=91.99 E-value=0.046 Score=41.08 Aligned_cols=19 Identities=32% Similarity=0.235 Sum_probs=17.0
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
.+|+|||||++|+++|..|
T Consensus 40 ~dVvIIGgG~aGl~aA~~l 58 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEI 58 (284)
T ss_dssp EEEEEECCSHHHHHHHHHH
T ss_pred cCEEEECccHHHHHHHHHH
Confidence 3699999999999999876
No 218
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=91.98 E-value=0.059 Score=33.39 Aligned_cols=41 Identities=22% Similarity=0.251 Sum_probs=26.4
Q ss_pred cccccCCCCCc-cEEEEecCCCChhHHHHHHHhhcCCCCcceEE-eeceEe
Q psy7674 2 VDIQTAPPDYN-FQVVELDKLPNGAQIQTALFERTGQKTVPNIF-IHGKHI 50 (164)
Q Consensus 2 ~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~-i~~~~i 50 (164)
++++|++.+.. +..++||.+ +++.+ ..|.+ +|+++ ++|+.+
T Consensus 17 ~~~~L~~~~~~~~~~vdid~~---~~l~~----~~g~~-vPtl~~~~G~~v 59 (87)
T 1ttz_A 17 AVEALAQARAGAFFSVFIDDD---AALES----AYGLR-VPVLRDPMGREL 59 (87)
T ss_dssp HHHHHHHTTCCCEEEEECTTC---HHHHH----HHTTT-CSEEECTTCCEE
T ss_pred HHHHHHHHHHhheEEEECCCC---HHHHH----HhCCC-cCeEEEECCEEE
Confidence 56777888876 666666655 33322 23666 99999 777744
No 219
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.93 E-value=0.19 Score=39.13 Aligned_cols=80 Identities=18% Similarity=0.170 Sum_probs=52.0
Q ss_pred ceEEeeceEec----------CCceEEEeccCCc-ccccccchhhHHHHhhcCceEEee-EEEEeeCcEEEeCCeeEEEE
Q psy7674 41 PNIFIHGKHID----------NNSVVIFSKSWCP-FCTKAKENNYEKELEKNKIDYFNA-KAVFVDKHRVKFAGEERTVS 108 (164)
Q Consensus 41 p~v~i~~~~ig----------~d~vvv~~~~~cp-~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~~~v~v~~~~~~~~ 108 (164)
..++|++-.++ +.+++++.+..-+ ...+.....+.+.+++.||+++.+ ++..++...+.+++. + +.
T Consensus 145 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g-~-i~ 222 (367)
T 1xhc_A 145 EAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEETGVKFFLNSELLEANEEGVLTNSG-F-IE 222 (367)
T ss_dssp EEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHHTTEEEECSCCEEEECSSEEEETTE-E-EE
T ss_pred cEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeeccCCHHHHHHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCC-E-EE
Confidence 34556665455 5567777654322 111122334567788899999988 566676556766432 5 99
Q ss_pred eceEEEecCCCCCC
Q psy7674 109 AQNFIIAVGGRPTY 122 (164)
Q Consensus 109 ~d~liiAtGs~~~~ 122 (164)
+|.+++|+|.+|+.
T Consensus 223 ~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 223 GKVKICAIGIVPNV 236 (367)
T ss_dssp CSCEEEECCEEECC
T ss_pred cCEEEECcCCCcCH
Confidence 99999999998875
No 220
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=91.83 E-value=0.17 Score=40.82 Aligned_cols=71 Identities=14% Similarity=0.133 Sum_probs=45.0
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEee--Cc--EEEe-C-Ce-eEEEEeceEEEecCCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD--KH--RVKF-A-GE-ERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~--~v~v-~-~~-~~~~~~d~liiAtGs~~~ 121 (164)
+..++++.+.. +|...+.....+.+.+++.||+++.+ .+..++ .. .+.+ + +. ++.+.+|.+++|+|.+|+
T Consensus 208 G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 208 GSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPN 287 (482)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEEC
T ss_pred CCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcC
Confidence 55677777543 33222223345567788899999988 555553 22 2333 3 00 156889999999999987
Q ss_pred C
Q psy7674 122 Y 122 (164)
Q Consensus 122 ~ 122 (164)
.
T Consensus 288 ~ 288 (482)
T 1ojt_A 288 G 288 (482)
T ss_dssp G
T ss_pred C
Confidence 5
No 221
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=91.75 E-value=0.2 Score=39.35 Aligned_cols=69 Identities=14% Similarity=0.158 Sum_probs=43.8
Q ss_pred CCceEEEeccCCccc---ccccchhhHHHHhhcCceEEee-EEEEeeC--c---EEEe-CCeeEEEEeceEEEecCCCCC
Q psy7674 52 NNSVVIFSKSWCPFC---TKAKENNYEKELEKNKIDYFNA-KAVFVDK--H---RVKF-AGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 52 ~d~vvv~~~~~cp~~---~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~--~---~v~v-~~~~~~~~~d~liiAtGs~~~ 121 (164)
...++++.+...+.. .......+.+.+++.||+++.+ .+..+.. . .+.+ ++ +.+.+|.+|+|+|.+|+
T Consensus 165 g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG--~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 165 GLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDG--NTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp TCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTS--CEEECSEEEECCCEEEC
T ss_pred CCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCC--CEEEcCEEEECcCCccC
Confidence 445666655432211 1122334567788899999987 4555532 2 2444 55 67999999999999887
Q ss_pred C
Q psy7674 122 Y 122 (164)
Q Consensus 122 ~ 122 (164)
.
T Consensus 243 ~ 243 (404)
T 3fg2_P 243 V 243 (404)
T ss_dssp C
T ss_pred H
Confidence 5
No 222
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=91.73 E-value=0.44 Score=38.26 Aligned_cols=72 Identities=17% Similarity=0.242 Sum_probs=45.5
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEeeC----cE--EEeC----CeeEEEEeceEEEecCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDK----HR--VKFA----GEERTVSAQNFIIAVGG 118 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~----~~--v~v~----~~~~~~~~d~liiAtGs 118 (164)
+..++++.+.. .|.........+.+.+++.||+++.+ .+..++. +. +.+. ++...+.+|.+++|+|.
T Consensus 206 g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 206 GSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred CCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 45677776543 22212222334567788899999988 4555532 22 3332 23467999999999999
Q ss_pred CCCCC
Q psy7674 119 RPTYP 123 (164)
Q Consensus 119 ~~~~p 123 (164)
+|+..
T Consensus 286 ~p~~~ 290 (478)
T 1v59_A 286 RPYIA 290 (478)
T ss_dssp EECCT
T ss_pred CcCCC
Confidence 98865
No 223
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=91.51 E-value=0.4 Score=40.62 Aligned_cols=71 Identities=17% Similarity=0.195 Sum_probs=45.8
Q ss_pred CCceEEEeccCC--cccc-cccchhhHHHHhhcCceEEee-EEEEeeCcEEEe----CCeeEEEEeceEEEecCCCCCC
Q psy7674 52 NNSVVIFSKSWC--PFCT-KAKENNYEKELEKNKIDYFNA-KAVFVDKHRVKF----AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 52 ~d~vvv~~~~~c--p~~~-~~~~~~~~~~l~~~gv~~~~~-~~~~~~~~~v~v----~~~~~~~~~d~liiAtGs~~~~ 122 (164)
...++++..... +... ......+.+.+++.||+++.+ .+..++...+.+ ++++..+.+|.+|+|+|.+|+.
T Consensus 548 g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 548 GYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPRE 626 (690)
T ss_dssp TCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEECC
T ss_pred CCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCCh
Confidence 445666654332 2211 222345667888999999988 556676554443 3344679999999999988764
No 224
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=91.48 E-value=0.38 Score=38.34 Aligned_cols=70 Identities=16% Similarity=0.232 Sum_probs=45.8
Q ss_pred CCceEEEeccC--Cc-ccccccchhhHHHHhhcCceEEee-EEEEee--CcEEE-e--CCeeEEEEeceEEEecCCCCCC
Q psy7674 52 NNSVVIFSKSW--CP-FCTKAKENNYEKELEKNKIDYFNA-KAVFVD--KHRVK-F--AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 52 ~d~vvv~~~~~--cp-~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~~v~-v--~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+..++++.+.. +| .........+.+.+++.||+++.+ ++..++ ...+. + ++ ..+.+|.+++|+|.+|+.
T Consensus 172 g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g--~~i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 172 NYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDG--KEIKSDIAILCIGFRPNT 249 (452)
T ss_dssp TCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTS--CEEEESEEEECCCEEECC
T ss_pred CCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCC--CEEECCEEEECcCCCCCH
Confidence 45677776543 33 222233345667788999999988 455553 23332 2 55 679999999999999875
Q ss_pred C
Q psy7674 123 P 123 (164)
Q Consensus 123 p 123 (164)
.
T Consensus 250 ~ 250 (452)
T 2cdu_A 250 E 250 (452)
T ss_dssp G
T ss_pred H
Confidence 4
No 225
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=91.35 E-value=0.22 Score=36.05 Aligned_cols=53 Identities=23% Similarity=0.212 Sum_probs=35.1
Q ss_pred hhHHHHhhc-CceEEeeEEEEee--CcE---EEe-CCeeEEEEeceEEEecCCCCCCCCCCC
Q psy7674 73 NYEKELEKN-KIDYFNAKAVFVD--KHR---VKF-AGEERTVSAQNFIIAVGGRPTYPDIPG 127 (164)
Q Consensus 73 ~~~~~l~~~-gv~~~~~~~~~~~--~~~---v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g 127 (164)
.+.+.+++. |++++..+++.+. ... +.+ ++ ..+.+|.+|+|||..++....+|
T Consensus 73 ~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g--~~i~a~~VV~A~G~~s~~~~~~G 132 (232)
T 2cul_A 73 RAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEG--PPARGEKVVLAVGSFLGARLFLG 132 (232)
T ss_dssp HHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTS--CCEECSEEEECCTTCSSCEEEET
T ss_pred HHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCC--CEEECCEEEECCCCChhhceecC
Confidence 345667776 9999866666553 332 333 44 57999999999999765443344
No 226
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=91.29 E-value=0.65 Score=38.03 Aligned_cols=80 Identities=13% Similarity=0.155 Sum_probs=49.5
Q ss_pred ceEEeeceEec----------CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEeeC------------
Q psy7674 41 PNIFIHGKHID----------NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDK------------ 95 (164)
Q Consensus 41 p~v~i~~~~ig----------~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~------------ 95 (164)
..+.|++-.++ +..++++.+.. .|.........+.+.+++.||+++.+ .+..+..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~ 232 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAG 232 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGT
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccc
Confidence 35556665454 45677776543 23222222334567788899999987 4444432
Q ss_pred ---------cE--EEe-CCeeEEEEeceEEEecCCCCCC
Q psy7674 96 ---------HR--VKF-AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 96 ---------~~--v~v-~~~~~~~~~d~liiAtGs~~~~ 122 (164)
.. +.. ++ +.+.+|.+++|||.+|+.
T Consensus 233 ~~~~~~~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 233 EDTAHQHIKGHLSLTLSNG--ELLETDLLIMAIGVRPET 269 (565)
T ss_dssp CCCTTCCTTCEEEEEETTS--CEEEESEEEECSCEEECC
T ss_pred cccccccCCCcEEEEEcCC--CEEEcCEEEECcCCccch
Confidence 22 333 44 579999999999998874
No 227
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=91.28 E-value=0.021 Score=43.17 Aligned_cols=27 Identities=22% Similarity=0.543 Sum_probs=21.5
Q ss_pred hHHHHHHHhhcCCCCc--ceEEeece-Eec
Q psy7674 25 AQIQTALFERTGQKTV--PNIFIHGK-HID 51 (164)
Q Consensus 25 ~~~~~~l~~~~g~~~v--p~v~i~~~-~ig 51 (164)
.+.|+++.+..|.++| |++||||+ |++
T Consensus 98 ~~r~~~~~~~~G~~tVyTPqI~Ing~~~v~ 127 (270)
T 2axo_A 98 TERQYGYMRALGRNGVYTPQAILNGRDHVK 127 (270)
T ss_dssp HHHHHHHHHHTTCSCCCSSEEEETTTEEEE
T ss_pred hHHHHHHHHHhCCCcccCCEEEECCEEeec
Confidence 4456778777899999 99999997 554
No 228
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.07 E-value=0.43 Score=38.16 Aligned_cols=73 Identities=19% Similarity=0.344 Sum_probs=46.1
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEeeCc----EEEe----CCeeEEEEeceEEEecCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDKH----RVKF----AGEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~~----~v~v----~~~~~~~~~d~liiAtGs~~ 120 (164)
+..++++.+.. .|...+.....+.+.+++.||+++.+ ++..++.. .+.+ +++...+.+|.+++|+|.+|
T Consensus 200 g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 200 GSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEE
T ss_pred CCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCc
Confidence 45677776543 33222222344567788899999987 45556421 2333 23235799999999999998
Q ss_pred CCCC
Q psy7674 121 TYPD 124 (164)
Q Consensus 121 ~~p~ 124 (164)
+...
T Consensus 280 ~~~~ 283 (470)
T 1dxl_A 280 FTSG 283 (470)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 7643
No 229
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=90.96 E-value=0.59 Score=37.89 Aligned_cols=69 Identities=19% Similarity=0.277 Sum_probs=43.9
Q ss_pred CceEEEeccCC--cccccccchhhHHHHhhcCceEEee-EEEEeeC---c--EEEe-CCeeEEEEeceEEEecCCCCCCC
Q psy7674 53 NSVVIFSKSWC--PFCTKAKENNYEKELEKNKIDYFNA-KAVFVDK---H--RVKF-AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 53 d~vvv~~~~~c--p~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~---~--~v~v-~~~~~~~~~d~liiAtGs~~~~p 123 (164)
..++++.+..- |.........+.+.+++.||+++.+ .+..++. . .+.+ ++ +.+.+|.+++|+|.+|+..
T Consensus 218 ~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G--~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 218 GKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESG--KTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp CEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTS--CEEEESEEEECSCEEECCG
T ss_pred CeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCC--cEEEcCEEEECCCCccccc
Confidence 35666665432 2211222334567788899999988 4555532 1 3444 45 5799999999999988764
No 230
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=90.73 E-value=0.55 Score=37.61 Aligned_cols=73 Identities=19% Similarity=0.321 Sum_probs=44.3
Q ss_pred CCceEEEeccC--CcccccccchhhHHHH-hhcCceEEee-EEEEeeC--c--EEEe---CCeeEEEEeceEEEecCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKEL-EKNKIDYFNA-KAVFVDK--H--RVKF---AGEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l-~~~gv~~~~~-~~~~~~~--~--~v~v---~~~~~~~~~d~liiAtGs~~ 120 (164)
+..++++.+.. .|...+.....+.+.+ ++.||+++.+ ++..++. . .+.+ +++...+.+|.+++|+|.+|
T Consensus 197 g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 197 GAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEE
T ss_pred CCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCccc
Confidence 45666766543 2222222233456778 8899999987 5555542 1 2333 23225789999999999998
Q ss_pred CCCC
Q psy7674 121 TYPD 124 (164)
Q Consensus 121 ~~p~ 124 (164)
+...
T Consensus 277 ~~~~ 280 (468)
T 2qae_A 277 FTGG 280 (468)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 7643
No 231
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=90.72 E-value=0.27 Score=40.58 Aligned_cols=56 Identities=13% Similarity=0.153 Sum_probs=42.2
Q ss_pred cccccc-chhhHHHHhhcCceEE---eeEEEEeeCcEEEe-CCeeEEEEeceEEEecCCCCCC
Q psy7674 65 FCTKAK-ENNYEKELEKNKIDYF---NAKAVFVDKHRVKF-AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 65 ~~~~~~-~~~~~~~l~~~gv~~~---~~~~~~~~~~~v~v-~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+|++.. ...|.+.+.+.+|+++ ...+..+.++.+.+ +| +.+.+|.+|.|||-++..
T Consensus 326 g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~~~dG--~~~~~DvIV~ATGf~~~~ 386 (540)
T 3gwf_A 326 FAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDG--VLHELDVLVFATGFDAVD 386 (540)
T ss_dssp CCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEEEETTC--CEEECSEEEECCCBSCSS
T ss_pred CccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeEEcCCC--CEEECCEEEECCccCccc
Confidence 666653 3345566788899998 56777787777777 66 679999999999988763
No 232
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=90.71 E-value=0.093 Score=42.38 Aligned_cols=21 Identities=24% Similarity=-0.012 Sum_probs=18.4
Q ss_pred CCCcEEEECCcHHHHHhhccc
Q psy7674 143 DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l 163 (164)
..++|+|||||+.|+.+|..|
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L 141 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEEL 141 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHH
Confidence 347899999999999999876
No 233
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=90.58 E-value=0.48 Score=37.92 Aligned_cols=70 Identities=14% Similarity=0.214 Sum_probs=44.5
Q ss_pred CCceEEEeccCCcc-cccccchhhHHHHhhcCceEEee-EEEEee--CcE--EEeCCeeEEEEeceEEEecCCCCCCC
Q psy7674 52 NNSVVIFSKSWCPF-CTKAKENNYEKELEKNKIDYFNA-KAVFVD--KHR--VKFAGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 52 ~d~vvv~~~~~cp~-~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~~--v~v~~~~~~~~~d~liiAtGs~~~~p 123 (164)
+..++++.+..-+. ..+.....+.+.+++.|++++.+ .+..++ ... +.+++ ..+.+|.+++|+|.+|+..
T Consensus 199 g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~--~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 199 GSKVTVLARNTLFFREDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTTH--GELRADKLLVATGRTPNTR 274 (467)
T ss_dssp TCEEEEECSSCTTTTSCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEETT--EEEEESEEEECSCEEESCT
T ss_pred CCEEEEEEECCccCCCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEECC--cEEEcCEEEECCCCCcCCC
Confidence 44666666543221 22222334567788899999987 455553 232 33354 5799999999999988753
No 234
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=90.50 E-value=0.36 Score=37.60 Aligned_cols=69 Identities=13% Similarity=0.112 Sum_probs=43.9
Q ss_pred CCceEEEeccCCc--cc-ccccchhhHHHHhhcCceEEee-EEEEee--Cc--EEEe-CCeeEEEEeceEEEecCCCCCC
Q psy7674 52 NNSVVIFSKSWCP--FC-TKAKENNYEKELEKNKIDYFNA-KAVFVD--KH--RVKF-AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 52 ~d~vvv~~~~~cp--~~-~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~--~v~v-~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+..++++.+..-+ .. .......+.+.+++.|++++.+ .+..++ .. .+.+ ++ +.+.+|.+++|+|.+|+.
T Consensus 168 g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 168 GYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDG--EVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp TCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTS--CEEEESEEEECSCEEECC
T ss_pred CCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCC--CEEECCEEEECcCCCcCH
Confidence 4566666654322 11 1122344567788899999987 455553 22 2334 44 679999999999998875
No 235
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=90.49 E-value=0.56 Score=37.84 Aligned_cols=73 Identities=22% Similarity=0.221 Sum_probs=44.3
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEee--CcE--EEeC----CeeEEEEeceEEEecCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD--KHR--VKFA----GEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~~--v~v~----~~~~~~~~d~liiAtGs~~ 120 (164)
+.+++++.+.. .+.........+.+.+++.||+++.+ .+..+. ... +.+. ++...+.+|.+++|||-+|
T Consensus 221 g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 221 GAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKP 300 (491)
T ss_dssp TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEE
T ss_pred CCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCcc
Confidence 44566665433 22212222334567788899999987 444443 222 3332 3335799999999999988
Q ss_pred CCCC
Q psy7674 121 TYPD 124 (164)
Q Consensus 121 ~~p~ 124 (164)
+...
T Consensus 301 ~~~~ 304 (491)
T 3urh_A 301 STDG 304 (491)
T ss_dssp CCTT
T ss_pred CCCc
Confidence 7643
No 236
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=90.23 E-value=0.45 Score=37.69 Aligned_cols=50 Identities=14% Similarity=0.212 Sum_probs=37.5
Q ss_pred hhhHHHHhhcCceEEee-EEEEeeCcEEEe-C--CeeEEEEeceEEEecCCCCC
Q psy7674 72 NNYEKELEKNKIDYFNA-KAVFVDKHRVKF-A--GEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 72 ~~~~~~l~~~gv~~~~~-~~~~~~~~~v~v-~--~~~~~~~~d~liiAtGs~~~ 121 (164)
..+.+.+++.||+++.+ .++.++...+.+ + +++..+.+|.+++|+|.++.
T Consensus 204 ~~l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~ 257 (430)
T 3h28_A 204 RLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECC
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCccc
Confidence 34567788999999987 566777666665 3 22378999999999997653
No 237
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=90.22 E-value=0.69 Score=37.42 Aligned_cols=69 Identities=17% Similarity=0.178 Sum_probs=43.8
Q ss_pred CceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEeeC---c--EEEe-CCeeEEEEeceEEEecCCCCCCC
Q psy7674 53 NSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDK---H--RVKF-AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 53 d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~---~--~v~v-~~~~~~~~~d~liiAtGs~~~~p 123 (164)
..++++.+.. .|.........+.+.+++.||+++.+ .+..++. . .+.+ ++ +.+.+|.+++|+|.+|+..
T Consensus 214 ~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G--~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 214 GQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESG--AEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTS--CEEEESEEEECSCEEESCT
T ss_pred CeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCC--cEEEcCEEEEccCCCcCcc
Confidence 3566666543 22211222334567788899999988 4555532 1 3444 44 5799999999999998764
No 238
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=90.18 E-value=0.77 Score=36.58 Aligned_cols=52 Identities=15% Similarity=0.253 Sum_probs=36.6
Q ss_pred hhhHHHHhhcCceEEee-EEEEee--CcEE--EeCCeeEEEEeceEEEecCCCCCCCCC
Q psy7674 72 NNYEKELEKNKIDYFNA-KAVFVD--KHRV--KFAGEERTVSAQNFIIAVGGRPTYPDI 125 (164)
Q Consensus 72 ~~~~~~l~~~gv~~~~~-~~~~~~--~~~v--~v~~~~~~~~~d~liiAtGs~~~~p~i 125 (164)
..+.+.+++.||+++.+ .+..++ ...+ ..++ ..+.+|.+++|||.+|+....
T Consensus 193 ~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~--g~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 193 AEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSE--QEISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp HHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESS--CEEEESEEEECSCCBCCCSSC
T ss_pred HHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECC--CEEEeCEEEECcCCCCChHHH
Confidence 34567788899999987 455553 3333 3344 379999999999999876543
No 239
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=89.80 E-value=0.14 Score=36.88 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=20.6
Q ss_pred CceEEEeccCCcccccccchhhHHHHhhcCceEE
Q psy7674 53 NSVVIFSKSWCPFCTKAKENNYEKELEKNKIDYF 86 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~~ 86 (164)
..+++|+.+|||||+..... +.++ .+.+++++
T Consensus 88 ~~vv~F~d~~Cp~C~~~~~~-l~~l-~~~~v~v~ 119 (216)
T 1eej_A 88 HVITVFTDITCGYCHKLHEQ-MADY-NALGITVR 119 (216)
T ss_dssp EEEEEEECTTCHHHHHHHTT-HHHH-HHTTEEEE
T ss_pred EEEEEEECCCCHHHHHHHHH-HHHH-HhCCcEEE
Confidence 35777999999999986532 2232 23366653
No 240
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=89.75 E-value=0.59 Score=39.41 Aligned_cols=49 Identities=16% Similarity=0.308 Sum_probs=37.1
Q ss_pred hHHHHhhcCceEEee-EEEEeeCcEEEe--CCeeEEEEeceEEEecCCCCCC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVDKHRVKF--AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~~~~v~v--~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+.+.+++.||+++.+ .+..++...+.+ +++...+.+|.+++|+|.+|+.
T Consensus 579 ~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G~~p~~ 630 (671)
T 1ps9_A 579 HRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNR 630 (671)
T ss_dssp HHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEECCCEEECC
T ss_pred HHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCCccccH
Confidence 456788899999988 455666555555 5544579999999999988864
No 241
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=89.70 E-value=0.6 Score=38.06 Aligned_cols=50 Identities=20% Similarity=0.286 Sum_probs=36.6
Q ss_pred hhhHHHHhhcCceEEee-EEEEeeCcEEEe-----CCe--eEEEEeceEEEecCCCCC
Q psy7674 72 NNYEKELEKNKIDYFNA-KAVFVDKHRVKF-----AGE--ERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 72 ~~~~~~l~~~gv~~~~~-~~~~~~~~~v~v-----~~~--~~~~~~d~liiAtGs~~~ 121 (164)
....+.|++.||+++.+ .+..+++..+.+ ++. ++.+.+|.+|.|+|-+|+
T Consensus 276 ~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 276 SYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp HHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred HHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCC
Confidence 34567889999999988 456677665544 221 246999999999998765
No 242
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=89.40 E-value=1 Score=36.22 Aligned_cols=73 Identities=12% Similarity=0.212 Sum_probs=44.1
Q ss_pred CCceEEEeccC-CcccccccchhhHHHHhhcCceEEee-EEEEee---Cc--EEEe-C---CeeEEEEeceEEEecCCCC
Q psy7674 52 NNSVVIFSKSW-CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD---KH--RVKF-A---GEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 52 ~d~vvv~~~~~-cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~---~~--~v~v-~---~~~~~~~~d~liiAtGs~~ 120 (164)
+..++++.+.. .|.........+.+.+++.||+++.+ .+..+. .. .+.+ + ++...+.+|.+++|+|-+|
T Consensus 208 g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p 287 (488)
T 3dgz_A 208 GLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVP 287 (488)
T ss_dssp TCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred CCceEEEEcCcccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCc
Confidence 55677776542 22222222334567788999999987 444442 22 2333 2 4223578999999999888
Q ss_pred CCCC
Q psy7674 121 TYPD 124 (164)
Q Consensus 121 ~~p~ 124 (164)
+...
T Consensus 288 ~~~~ 291 (488)
T 3dgz_A 288 ETRT 291 (488)
T ss_dssp SCGG
T ss_pred ccCc
Confidence 7643
No 243
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=89.15 E-value=0.89 Score=32.30 Aligned_cols=16 Identities=31% Similarity=0.945 Sum_probs=13.7
Q ss_pred eEEEeccCCccccccc
Q psy7674 55 VVIFSKSWCPFCTKAK 70 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~ 70 (164)
++.|..+|||+|+...
T Consensus 138 ~v~F~a~wC~~C~~~~ 153 (226)
T 1a8l_A 138 ILVFVTPTCPYCPLAV 153 (226)
T ss_dssp EEEEECSSCTTHHHHH
T ss_pred EEEEeCCCCCccHHHH
Confidence 5669999999999875
No 244
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=89.01 E-value=0.49 Score=38.13 Aligned_cols=50 Identities=18% Similarity=0.289 Sum_probs=35.6
Q ss_pred hhHHHHhhcCceEEee-EEEEeeC--c--EEEe-CCeeEEEEeceEEEecCCCCCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVDK--H--RVKF-AGEERTVSAQNFIIAVGGRPTYPD 124 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~~--~--~v~v-~~~~~~~~~d~liiAtGs~~~~p~ 124 (164)
.+.+.+++.|++++.+ .+..++. . .+.+ ++ +.+.+|.+++|+|.+|....
T Consensus 237 ~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 237 LLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNG--QTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp HHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTS--CEEEESEEEECCCEEECCTT
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCC--cEEEcCEEEEeeCCCcCCCC
Confidence 3556778889999986 4555532 2 3444 44 57999999999999887653
No 245
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=88.95 E-value=0.074 Score=34.42 Aligned_cols=34 Identities=15% Similarity=0.331 Sum_probs=23.5
Q ss_pred CCCccEEEEecCCCChhHHHHHHHhhcCCCCcceE--EeeceEe
Q psy7674 9 PDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNI--FIHGKHI 50 (164)
Q Consensus 9 ~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v--~i~~~~i 50 (164)
.+++|..++||.+ .++ .+..|.+ +|++ |++|+.+
T Consensus 57 ~~i~~~~vDId~d---~~l----~~~ygv~-VP~l~~~~dG~~v 92 (107)
T 2fgx_A 57 SWFELEVINIDGN---EHL----TRLYNDR-VPVLFAVNEDKEL 92 (107)
T ss_dssp SCCCCEEEETTTC---HHH----HHHSTTS-CSEEEETTTTEEE
T ss_pred cCCeEEEEECCCC---HHH----HHHhCCC-CceEEEEECCEEE
Confidence 6788888888866 232 2233655 9999 8899844
No 246
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=88.95 E-value=0.33 Score=33.80 Aligned_cols=33 Identities=9% Similarity=0.153 Sum_probs=22.1
Q ss_pred ceEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... ..+.+.+++.++.++
T Consensus 49 vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi 83 (187)
T 3dwv_A 49 LLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVL 83 (187)
T ss_dssp EEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEE
T ss_pred EEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEE
Confidence 344588999999998642 234455566677775
No 247
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=88.63 E-value=0.19 Score=31.78 Aligned_cols=17 Identities=35% Similarity=0.993 Sum_probs=14.3
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 22 ~vv~f~a~wC~~C~~~~ 38 (110)
T 2l6c_A 22 AIVFFHKNLCPHCKNME 38 (110)
T ss_dssp EEEEEECSSCSTHHHHH
T ss_pred EEEEEECCCCHhHHHHH
Confidence 36679999999999876
No 248
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=88.62 E-value=0.13 Score=32.80 Aligned_cols=17 Identities=24% Similarity=0.763 Sum_probs=14.3
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|.++|||+|+...
T Consensus 32 ~~v~f~a~wC~~C~~~~ 48 (118)
T 1zma_A 32 ATFFIGRKTCPYCRKFA 48 (118)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCccHHHHH
Confidence 46779999999999865
No 249
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=88.48 E-value=0.13 Score=32.81 Aligned_cols=17 Identities=29% Similarity=0.999 Sum_probs=14.7
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 15 ~vV~F~A~WC~~C~~~~ 31 (106)
T 3kp8_A 15 GGTMYGAYWCPHCQDQK 31 (106)
T ss_dssp TCEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 36889999999999876
No 250
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=88.25 E-value=1.3 Score=36.51 Aligned_cols=58 Identities=17% Similarity=0.146 Sum_probs=43.7
Q ss_pred CCccccccc-chhhHHHHhhcCceEE---eeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCC
Q psy7674 62 WCPFCTKAK-ENNYEKELEKNKIDYF---NAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 62 ~cp~~~~~~-~~~~~~~l~~~gv~~~---~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~ 121 (164)
+-+.|++.. ...|.+.|.+.+|+++ ...+..+.++.+.+.+ + .+.+|.+|.|||-++.
T Consensus 331 ~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv~~~d-G-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 331 HPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTAD-A-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp SCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTEEEESS-C-EEECSEEEECCCCBSS
T ss_pred CCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCeEEeCC-C-eeecCEEEECCccccc
Confidence 445777754 4456777888899998 4677778877777744 2 7899999999998764
No 251
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=88.25 E-value=0.17 Score=43.22 Aligned_cols=20 Identities=35% Similarity=0.295 Sum_probs=17.9
Q ss_pred CCcEEEECCcHHHHHhhccc
Q psy7674 144 PGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 144 ~~~vvViGgG~~g~E~A~~l 163 (164)
.++|+|||||+.|+++|..|
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L 408 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVL 408 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHH
Confidence 46899999999999999876
No 252
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=88.14 E-value=0.66 Score=37.12 Aligned_cols=50 Identities=16% Similarity=0.249 Sum_probs=35.8
Q ss_pred hhhHHHHhhcCceEEee-EEEEeeC---c--EEE-e-CCeeEEEEeceEEEecCCCCCCCC
Q psy7674 72 NNYEKELEKNKIDYFNA-KAVFVDK---H--RVK-F-AGEERTVSAQNFIIAVGGRPTYPD 124 (164)
Q Consensus 72 ~~~~~~l~~~gv~~~~~-~~~~~~~---~--~v~-v-~~~~~~~~~d~liiAtGs~~~~p~ 124 (164)
..+.+.+++.|++++.+ .+..++. . .+. + ++ + +.+|.+++|+|.+|+...
T Consensus 215 ~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g--~-i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 215 RGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHG--E-IVADQVMLALGRMPNTNG 272 (463)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSC--E-EEESEEEECSCEEESCTT
T ss_pred HHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCC--e-EEeCEEEEeeCcccCCCC
Confidence 34556788899999987 4555532 2 455 5 34 4 999999999999887653
No 253
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=88.00 E-value=0.16 Score=38.72 Aligned_cols=19 Identities=32% Similarity=0.331 Sum_probs=16.9
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
..|+|||||+.|+-+|..|
T Consensus 66 ~DV~IIGaGPAGlsAA~~l 84 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVI 84 (326)
T ss_dssp ESEEEECCSHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHH
Confidence 4799999999999999765
No 254
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=87.88 E-value=0.66 Score=38.29 Aligned_cols=58 Identities=10% Similarity=0.192 Sum_probs=43.7
Q ss_pred CCccccccc-chhhHHHHhhcCceEE---eeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCC
Q psy7674 62 WCPFCTKAK-ENNYEKELEKNKIDYF---NAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 62 ~cp~~~~~~-~~~~~~~l~~~gv~~~---~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~ 121 (164)
|.+.|++.. ...|.+.+.+.+|+++ ...+..+.++.+.+++ + .+.+|.+|.|||-++.
T Consensus 336 ~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~~~d-G-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 336 HAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVTTG-A-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp CCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEEESS-C-EEECSEEEECCCEEES
T ss_pred CCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEEeCC-C-ceecCEEEECCccccc
Confidence 556777754 3455667788899998 6777778777777744 2 7899999999998765
No 255
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=87.81 E-value=1.4 Score=35.32 Aligned_cols=72 Identities=14% Similarity=0.143 Sum_probs=44.3
Q ss_pred CCceEEEeccC-CcccccccchhhHHHHhhcCceEEee-EEEEee---Cc--EEEe-CC---eeEEEEeceEEEecCCCC
Q psy7674 52 NNSVVIFSKSW-CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD---KH--RVKF-AG---EERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 52 ~d~vvv~~~~~-cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~---~~--~v~v-~~---~~~~~~~d~liiAtGs~~ 120 (164)
+.+++++.++. .+.........+.+.+++.||+++.+ .+..+. .. .+.+ ++ ....+.+|.+++|+|.+|
T Consensus 210 g~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 210 GYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp TCEEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred CCEEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 55677776542 22222222344567788999999987 444453 22 2333 22 234789999999999888
Q ss_pred CCC
Q psy7674 121 TYP 123 (164)
Q Consensus 121 ~~p 123 (164)
+..
T Consensus 290 ~~~ 292 (483)
T 3dgh_A 290 LVD 292 (483)
T ss_dssp CCG
T ss_pred CcC
Confidence 754
No 256
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=87.79 E-value=0.7 Score=39.04 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=37.9
Q ss_pred hhHHHHhh-cCceEEeeEEEEe--eCcE---EEe-CCeeEEEEeceEEEecCCCCCCCCCCCc
Q psy7674 73 NYEKELEK-NKIDYFNAKAVFV--DKHR---VKF-AGEERTVSAQNFIIAVGGRPTYPDIPGA 128 (164)
Q Consensus 73 ~~~~~l~~-~gv~~~~~~~~~~--~~~~---v~v-~~~~~~~~~d~liiAtGs~~~~p~i~g~ 128 (164)
.+.+.+++ .|++++.++++.+ +... +.+ ++ ..+.+|.+|+|||+.++.+.++|.
T Consensus 128 ~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG--~~i~AdaVVLATG~~s~~~~~~G~ 188 (637)
T 2zxi_A 128 YMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLG--VEYKTKAVVVTTGTFLNGVIYIGD 188 (637)
T ss_dssp HHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTS--CEEECSEEEECCTTCBTCEEEETT
T ss_pred HHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCC--cEEEeCEEEEccCCCccCceeccc
Confidence 34556666 5999987777765 3333 333 44 679999999999998877666653
No 257
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=87.75 E-value=0.52 Score=34.99 Aligned_cols=49 Identities=22% Similarity=0.205 Sum_probs=33.3
Q ss_pred HHHHhhcCceEEee-EEEEeeCc-----EEEe---CCeeEEEEeceEEEecCCCCCCC
Q psy7674 75 EKELEKNKIDYFNA-KAVFVDKH-----RVKF---AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 75 ~~~l~~~gv~~~~~-~~~~~~~~-----~v~v---~~~~~~~~~d~liiAtGs~~~~p 123 (164)
.+.+++.||+++.+ .+..++.. .+.+ +++...+.+|.+++|+|.+|...
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 247 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNE 247 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCG
T ss_pred HHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCch
Confidence 45567789999976 45555321 2444 44334799999999999988754
No 258
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=87.72 E-value=0.25 Score=35.49 Aligned_cols=32 Identities=16% Similarity=0.348 Sum_probs=20.9
Q ss_pred CceEEEeccCCcccccccchhhHHHHhhcCceEE
Q psy7674 53 NSVVIFSKSWCPFCTKAKENNYEKELEKNKIDYF 86 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~~ 86 (164)
..+++|+..|||||+..... +.+ +.+.++++.
T Consensus 88 ~~vv~F~d~~Cp~C~~~~~~-l~~-~~~~~v~v~ 119 (211)
T 1t3b_A 88 HVVTVFMDITCHYCHLLHQQ-LKE-YNDLGITVR 119 (211)
T ss_dssp EEEEEEECTTCHHHHHHHTT-HHH-HHHTTEEEE
T ss_pred EEEEEEECCCCHhHHHHHHH-HHH-HHhCCcEEE
Confidence 35777999999999986532 223 333466653
No 259
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=87.60 E-value=0.38 Score=31.45 Aligned_cols=33 Identities=15% Similarity=0.393 Sum_probs=20.9
Q ss_pred ceEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... ..+.+.+...++.++
T Consensus 34 vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v 68 (148)
T 3hcz_A 34 TILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVY 68 (148)
T ss_dssp EEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEE
Confidence 345588999999987652 223444555566664
No 260
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=87.58 E-value=0.36 Score=32.55 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=20.4
Q ss_pred ceEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... ..+.+.+++.++.++
T Consensus 34 vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv 68 (169)
T 2v1m_A 34 CLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRIL 68 (169)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEE
Confidence 344577899999987642 123344455567664
No 261
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=87.55 E-value=0.34 Score=30.46 Aligned_cols=17 Identities=29% Similarity=0.766 Sum_probs=14.3
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 27 ~lv~f~~~~C~~C~~~~ 43 (120)
T 1mek_A 27 LLVEFYAPWCGHCKALA 43 (120)
T ss_dssp EEEEEECSSCSTTSTTH
T ss_pred EEEEEECCCCHHHHHhh
Confidence 36778999999999876
No 262
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=87.54 E-value=0.89 Score=33.75 Aligned_cols=47 Identities=15% Similarity=0.269 Sum_probs=31.7
Q ss_pred HHHhhcCceEEeeE-EEEeeCc----EEEe-C---CeeEEEEeceEEEecCCCCCC
Q psy7674 76 KELEKNKIDYFNAK-AVFVDKH----RVKF-A---GEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 76 ~~l~~~gv~~~~~~-~~~~~~~----~v~v-~---~~~~~~~~d~liiAtGs~~~~ 122 (164)
+.+++.||+++.+. +..++.. .+.+ + ++...+.+|.+++|+|.+|..
T Consensus 198 ~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 253 (323)
T 3f8d_A 198 TVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPT 253 (323)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCH
T ss_pred HHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCCh
Confidence 34444599999884 5555422 2444 3 533479999999999998873
No 263
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=87.53 E-value=1.2 Score=35.65 Aligned_cols=72 Identities=11% Similarity=0.084 Sum_probs=44.0
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEee---Cc-E--EEe-C---Ce--eEEEEeceEEEec
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD---KH-R--VKF-A---GE--ERTVSAQNFIIAV 116 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~---~~-~--v~v-~---~~--~~~~~~d~liiAt 116 (164)
+.+++++.+.. .|.........+.+.+++.||+++.+ .+..++ .. . +.+ + +. +..+.+|.+++|+
T Consensus 210 g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~ 289 (478)
T 3dk9_A 210 GSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAI 289 (478)
T ss_dssp TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECS
T ss_pred CCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEee
Confidence 45566666533 22222222334567788999999987 445553 12 2 333 2 11 1578999999999
Q ss_pred CCCCCCC
Q psy7674 117 GGRPTYP 123 (164)
Q Consensus 117 Gs~~~~p 123 (164)
|-+|+..
T Consensus 290 G~~p~~~ 296 (478)
T 3dk9_A 290 GRVPNTK 296 (478)
T ss_dssp CEEESCT
T ss_pred ccccCCC
Confidence 9988765
No 264
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=87.45 E-value=0.33 Score=32.28 Aligned_cols=33 Identities=15% Similarity=0.324 Sum_probs=20.0
Q ss_pred ceEEEeccCCcccccccch--hhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKEN--NYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~--~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|...... .+.+.+.+.++.++
T Consensus 32 vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv 66 (152)
T 2lrn_A 32 VLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIY 66 (152)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEE
Confidence 3555889999999876421 22333444456653
No 265
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=87.44 E-value=1.4 Score=35.70 Aligned_cols=72 Identities=17% Similarity=0.221 Sum_probs=43.1
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEee--CcE--EEe---CCeeEEEEeceEEEecCCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVD--KHR--VKF---AGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~~--v~v---~~~~~~~~~d~liiAtGs~~~ 121 (164)
+.+++++.+.. .|.........+.+.+++. |+++.+ .+..+. ... +.+ +++...+.+|.+++|+|.+|+
T Consensus 197 g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 197 GVIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp TCEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred CCeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 45667766543 2222222233455667766 999877 444453 222 333 233357999999999999987
Q ss_pred CCC
Q psy7674 122 YPD 124 (164)
Q Consensus 122 ~p~ 124 (164)
...
T Consensus 276 ~~~ 278 (492)
T 3ic9_A 276 VDK 278 (492)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 266
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=87.44 E-value=0.16 Score=35.35 Aligned_cols=17 Identities=24% Similarity=0.788 Sum_probs=14.3
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|+...
T Consensus 57 vvv~F~A~WC~pC~~~~ 73 (167)
T 1z6n_A 57 RLLVAGEMWCPDCQINL 73 (167)
T ss_dssp EEEEECCTTCHHHHHHH
T ss_pred EEEEEECCCChhHHHHH
Confidence 45669999999999875
No 267
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=87.37 E-value=0.28 Score=32.10 Aligned_cols=33 Identities=15% Similarity=0.419 Sum_probs=22.0
Q ss_pred ceEEEeccCCcccccccc-----hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE-----NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~-----~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... ..+.+.+++.++.++
T Consensus 30 vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v 67 (142)
T 3ewl_A 30 TMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVL 67 (142)
T ss_dssp EEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEE
T ss_pred EEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEE
Confidence 345588999999998731 124455666677764
No 268
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=87.20 E-value=0.72 Score=36.96 Aligned_cols=68 Identities=24% Similarity=0.314 Sum_probs=42.9
Q ss_pred CceEEEeccC--Cc-ccccccchhhHHHHhhcCceEEee-EEEEee--CcE--EEe-CCeeEEEEeceEEEecCCCCCC
Q psy7674 53 NSVVIFSKSW--CP-FCTKAKENNYEKELEKNKIDYFNA-KAVFVD--KHR--VKF-AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 53 d~vvv~~~~~--cp-~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~--~~~--v~v-~~~~~~~~~d~liiAtGs~~~~ 122 (164)
..++++.+.. .| ...+.....+.+.+++.||+++.+ .+..++ ... +.+ ++ +.+.+|.+++|||.+|+.
T Consensus 184 ~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g--~~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 184 IDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDK--RTLDADLVILAAGVSPNT 260 (472)
T ss_dssp CEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESS--CEEECSEEEECSCEEECC
T ss_pred CcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCC--CEEEcCEEEECCCCCcCH
Confidence 3455555432 22 222222344567788899999987 555553 233 333 55 579999999999998864
No 269
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=86.87 E-value=0.41 Score=33.26 Aligned_cols=33 Identities=6% Similarity=-0.080 Sum_probs=20.7
Q ss_pred ceEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... ..+.+.+++.++.++
T Consensus 52 vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv 86 (185)
T 2gs3_A 52 CIVTNVASQGGKTEVNYTQLVDLHARYAECGLRIL 86 (185)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEE
Confidence 345588899999987642 123344555567764
No 270
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=86.80 E-value=1 Score=36.46 Aligned_cols=49 Identities=18% Similarity=0.308 Sum_probs=35.8
Q ss_pred hhHHHHhhcCceEEee-EEEEee--CcE--EEe-CCeeEEEEeceEEEecCCCCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVD--KHR--VKF-AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~--~~~--v~v-~~~~~~~~~d~liiAtGs~~~~p 123 (164)
.+.+.+++.||+++.+ .+..++ ... +.+ ++ +.+.+|.+++|+|.+|+..
T Consensus 231 ~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG--~~i~aD~Vv~a~G~~pn~~ 285 (493)
T 1m6i_A 231 WTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDG--RKVETDHIVAAVGLEPNVE 285 (493)
T ss_dssp HHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTS--CEEEESEEEECCCEEECCT
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCC--CEEECCEEEECCCCCccHH
Confidence 4556788899999988 455553 233 334 45 6799999999999998753
No 271
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=86.76 E-value=0.21 Score=41.45 Aligned_cols=20 Identities=10% Similarity=0.029 Sum_probs=17.8
Q ss_pred CCcEEEECCcHHHHHhhccc
Q psy7674 144 PGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 144 ~~~vvViGgG~~g~E~A~~l 163 (164)
..+|+|||||..|+.+|..|
T Consensus 107 ~~DVVIVGgGpaGL~aA~~L 126 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVL 126 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHH
Confidence 36899999999999999876
No 272
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=86.65 E-value=0.37 Score=33.24 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=20.3
Q ss_pred eEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 55 VVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
++.|-.+|||+|..... ..+.+.++..++.++
T Consensus 42 lv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi 75 (180)
T 3kij_A 42 LVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVL 75 (180)
T ss_dssp EEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred EEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEE
Confidence 44488899999998642 223344555566664
No 273
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=86.61 E-value=1.1 Score=33.50 Aligned_cols=49 Identities=24% Similarity=0.383 Sum_probs=32.5
Q ss_pred HHHHhhc-CceEEee-EEEEeeCc-----EEEe-C---CeeEEEEeceEEEecCCCCCCC
Q psy7674 75 EKELEKN-KIDYFNA-KAVFVDKH-----RVKF-A---GEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 75 ~~~l~~~-gv~~~~~-~~~~~~~~-----~v~v-~---~~~~~~~~d~liiAtGs~~~~p 123 (164)
.+.+.+. ||+++.+ .+..++.. .+.+ + ++...+.+|.+++|+|.+|...
T Consensus 215 ~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 274 (338)
T 3itj_A 215 QKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATK 274 (338)
T ss_dssp HHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCG
T ss_pred HHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChh
Confidence 3445554 9999987 45555321 1444 2 3346799999999999988654
No 274
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=86.45 E-value=0.44 Score=32.94 Aligned_cols=33 Identities=18% Similarity=0.368 Sum_probs=20.5
Q ss_pred ceEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... ..+.+.+++.++.++
T Consensus 52 vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv 86 (181)
T 2p31_A 52 SLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVL 86 (181)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEE
Confidence 344488899999997642 123344455567664
No 275
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=86.43 E-value=0.83 Score=34.57 Aligned_cols=50 Identities=22% Similarity=0.434 Sum_probs=34.0
Q ss_pred HHHhhcCceEEee-EEEEeeCc----EEEe----CCeeEEEEeceEEEecCCCCCCCCC
Q psy7674 76 KELEKNKIDYFNA-KAVFVDKH----RVKF----AGEERTVSAQNFIIAVGGRPTYPDI 125 (164)
Q Consensus 76 ~~l~~~gv~~~~~-~~~~~~~~----~v~v----~~~~~~~~~d~liiAtGs~~~~p~i 125 (164)
+++++.||+++.+ .+..++.. .+.+ +++...+.+|.+++|+|.+|....+
T Consensus 199 ~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~ 257 (335)
T 2a87_A 199 RARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLV 257 (335)
T ss_dssp HHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTT
T ss_pred HHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHh
Confidence 4456789999987 45555432 2444 2333578999999999998876433
No 276
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=86.42 E-value=0.41 Score=31.62 Aligned_cols=33 Identities=15% Similarity=0.331 Sum_probs=20.8
Q ss_pred ceEEEeccCCcccccccch--hhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKEN--NYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~--~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|...... .+.+.+.+.++.++
T Consensus 31 vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v 65 (152)
T 3gl3_A 31 VYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVV 65 (152)
T ss_dssp EEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 3455889999999875422 33344555566664
No 277
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=86.41 E-value=0.47 Score=31.33 Aligned_cols=17 Identities=18% Similarity=0.446 Sum_probs=13.3
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 33 ~lv~f~~~~C~~C~~~~ 49 (152)
T 2lja_A 33 IYIDVWATWCGPCRGEL 49 (152)
T ss_dssp EEEEECCSSCCGGGGTH
T ss_pred EEEEEECCcCHhHHHHh
Confidence 35558899999998764
No 278
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=86.32 E-value=0.35 Score=32.01 Aligned_cols=33 Identities=21% Similarity=0.448 Sum_probs=20.6
Q ss_pred ceEEEeccCCcccccccch--hhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKEN--NYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~--~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|...... .+.+.+...++.++
T Consensus 29 vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv 63 (151)
T 2f9s_A 29 VFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIV 63 (151)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEE
Confidence 4555889999999976522 23334444466664
No 279
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=86.13 E-value=1.2 Score=33.22 Aligned_cols=49 Identities=8% Similarity=0.175 Sum_probs=33.9
Q ss_pred HHHhhcCceEEee-EEEEeeCc----EEEe-C---CeeEEEEeceEEEecCCCCCCCC
Q psy7674 76 KELEKNKIDYFNA-KAVFVDKH----RVKF-A---GEERTVSAQNFIIAVGGRPTYPD 124 (164)
Q Consensus 76 ~~l~~~gv~~~~~-~~~~~~~~----~v~v-~---~~~~~~~~d~liiAtGs~~~~p~ 124 (164)
+.+++.||+++.+ .+..++.. .+.+ + ++...+.+|.+++|+|.+|..+.
T Consensus 197 ~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 254 (332)
T 3lzw_A 197 ENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGP 254 (332)
T ss_dssp HHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGG
T ss_pred HHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchH
Confidence 4578889999986 45555432 2444 2 22367999999999999886543
No 280
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=86.03 E-value=1 Score=38.02 Aligned_cols=52 Identities=21% Similarity=0.280 Sum_probs=35.5
Q ss_pred hHHHHhhc-CceEEeeEEEEe--eCcEEE---e-CCeeEEEEeceEEEecCCCCCCCCCCC
Q psy7674 74 YEKELEKN-KIDYFNAKAVFV--DKHRVK---F-AGEERTVSAQNFIIAVGGRPTYPDIPG 127 (164)
Q Consensus 74 ~~~~l~~~-gv~~~~~~~~~~--~~~~v~---v-~~~~~~~~~d~liiAtGs~~~~p~i~g 127 (164)
+.+.+++. |++++.++++.+ +...+. + ++ ..+.+|.+|+|||+.++.+..+|
T Consensus 123 L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G--~~i~Ad~VVLATG~~s~~~i~~G 181 (641)
T 3cp8_A 123 MRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSG--RAIQAKAAILACGTFLNGLIHIG 181 (641)
T ss_dssp HHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTS--CEEEEEEEEECCTTCBTCEEEET
T ss_pred HHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCC--cEEEeCEEEECcCCCCCccceee
Confidence 44566664 999988777664 344433 3 44 57999999999999876544433
No 281
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=85.98 E-value=0.47 Score=30.53 Aligned_cols=17 Identities=29% Similarity=0.811 Sum_probs=14.4
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 38 ~lv~f~a~wC~~C~~~~ 54 (130)
T 2dml_A 38 WLVEFYAPWCGHCQRLT 54 (130)
T ss_dssp EEEEEECTTCSTTGGGH
T ss_pred EEEEEECCCCHHHHhhC
Confidence 46779999999999876
No 282
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=85.97 E-value=0.5 Score=32.93 Aligned_cols=33 Identities=9% Similarity=0.153 Sum_probs=21.3
Q ss_pred ceEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... ..+.+.+++.++.++
T Consensus 51 vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv 85 (190)
T 2vup_A 51 LLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVL 85 (190)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred EEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEE
Confidence 455588899999987542 233344555677764
No 283
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=85.97 E-value=0.89 Score=36.07 Aligned_cols=69 Identities=16% Similarity=0.169 Sum_probs=43.6
Q ss_pred CCceEEEeccCCcc---cccccchhhHHHHhhcCceEEee-EEEEeeC----c---EEEe-CCeeEEEEeceEEEecCCC
Q psy7674 52 NNSVVIFSKSWCPF---CTKAKENNYEKELEKNKIDYFNA-KAVFVDK----H---RVKF-AGEERTVSAQNFIIAVGGR 119 (164)
Q Consensus 52 ~d~vvv~~~~~cp~---~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~----~---~v~v-~~~~~~~~~d~liiAtGs~ 119 (164)
+..++++.+..-+. ........+.+.+++.||+++.+ .+..++. . .+.+ ++ +.+.+|.+++|+|.+
T Consensus 172 G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G--~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 172 NMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDG--TRLPADLVIAGIGLI 249 (431)
T ss_dssp TCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTS--CEEECSEEEECCCEE
T ss_pred CCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCC--CEEEcCEEEECCCCC
Confidence 44666666543221 11222334567788899999988 4555532 2 2444 45 679999999999988
Q ss_pred CCC
Q psy7674 120 PTY 122 (164)
Q Consensus 120 ~~~ 122 (164)
|+.
T Consensus 250 p~~ 252 (431)
T 1q1r_A 250 PNC 252 (431)
T ss_dssp ECC
T ss_pred cCc
Confidence 864
No 284
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=85.91 E-value=0.92 Score=34.10 Aligned_cols=49 Identities=20% Similarity=0.270 Sum_probs=33.1
Q ss_pred HHHhhcCceEEee-EEEEee--C---c--EEEe----CCeeEEEEeceEEEecCCCCCCCC
Q psy7674 76 KELEKNKIDYFNA-KAVFVD--K---H--RVKF----AGEERTVSAQNFIIAVGGRPTYPD 124 (164)
Q Consensus 76 ~~l~~~gv~~~~~-~~~~~~--~---~--~v~v----~~~~~~~~~d~liiAtGs~~~~p~ 124 (164)
+.+++.||+++.+ .+..++ . + .+.+ +++...+.+|.+++|+|.+|....
T Consensus 203 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~ 263 (333)
T 1vdc_A 203 RALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKF 263 (333)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGG
T ss_pred HHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHH
Confidence 4456789999876 445553 2 1 1444 233357899999999999887643
No 285
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=85.80 E-value=1.4 Score=34.89 Aligned_cols=50 Identities=16% Similarity=0.216 Sum_probs=35.8
Q ss_pred hhhHHHHhhcCceEEee-EEEEeeCcEEEe-C----Ce---eEEEEeceEEEecCCCCC
Q psy7674 72 NNYEKELEKNKIDYFNA-KAVFVDKHRVKF-A----GE---ERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 72 ~~~~~~l~~~gv~~~~~-~~~~~~~~~v~v-~----~~---~~~~~~d~liiAtGs~~~ 121 (164)
..+.+.+++.||+++.+ .+..++...+.+ + +. ...+.+|.+++++|.++.
T Consensus 212 ~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~ 270 (437)
T 3sx6_A 212 GILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGV 270 (437)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECC
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCc
Confidence 34567788999999987 456677665554 1 11 367999999999986553
No 286
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=85.73 E-value=2 Score=34.11 Aligned_cols=45 Identities=18% Similarity=0.265 Sum_probs=31.7
Q ss_pred hHHHHhhcCceEEee-EEEEe--eCcEEEe--CCeeEEEEeceEEEecCCCC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFV--DKHRVKF--AGEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~--~~~~v~v--~~~~~~~~~d~liiAtGs~~ 120 (164)
+.+.+++.|++++.+ +++.+ +...+.+ ++ ..+.+|++|+|||+.+
T Consensus 138 L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~--g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 138 LMAEMKEAGVQLRLETSIGEVERTASGFRVTTSA--GTVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEEETTEEEEEETT--EEEEESEEEECCCCSS
T ss_pred HHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECC--cEEEeeEEEECCCCcc
Confidence 455667789999887 45555 3333444 33 3799999999999876
No 287
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=85.72 E-value=0.91 Score=36.54 Aligned_cols=70 Identities=17% Similarity=0.209 Sum_probs=43.2
Q ss_pred CCceEEEeccC--CcccccccchhhHHHHhhcCceEEee-EEEEeeC-cE---EEeCCeeEEEEeceEEEecCCCCCCC
Q psy7674 52 NNSVVIFSKSW--CPFCTKAKENNYEKELEKNKIDYFNA-KAVFVDK-HR---VKFAGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 52 ~d~vvv~~~~~--cp~~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~-~~---v~v~~~~~~~~~d~liiAtGs~~~~p 123 (164)
+.+++++.+.. .+.........+.+.+++.||+++.+ .+..++. .. +..++ ..+.+|.+++|+|.+|+.+
T Consensus 209 g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~--~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 209 GKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDK--GTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp TCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETT--EEEECSEEEECSCEEESCG
T ss_pred CCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECC--CEEEcCEEEECcCCCcChH
Confidence 44566666532 22111222234567788899999987 4555532 22 23354 5799999999999988754
No 288
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=85.66 E-value=0.25 Score=38.88 Aligned_cols=19 Identities=21% Similarity=0.329 Sum_probs=17.1
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
.+|+|||||.+|+-+|..|
T Consensus 37 ~dVvIIGaGi~Gls~A~~L 55 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYL 55 (405)
T ss_dssp EEEEEECCSHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHH
Confidence 5799999999999999876
No 289
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=85.55 E-value=0.53 Score=31.69 Aligned_cols=33 Identities=9% Similarity=0.220 Sum_probs=20.4
Q ss_pred ceEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... ..+.+.+++.++.++
T Consensus 35 vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv 69 (170)
T 2p5q_A 35 LLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEIL 69 (170)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEE
Confidence 344577899999987542 223344555567664
No 290
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=85.55 E-value=1.2 Score=33.32 Aligned_cols=45 Identities=18% Similarity=0.305 Sum_probs=30.5
Q ss_pred hhcCceEEee-EEEEeeCc----EEEe----CCeeEEEEeceEEEecCCCCCCC
Q psy7674 79 EKNKIDYFNA-KAVFVDKH----RVKF----AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 79 ~~~gv~~~~~-~~~~~~~~----~v~v----~~~~~~~~~d~liiAtGs~~~~p 123 (164)
++.||+++.+ .+..++.. .+.+ +++...+.+|.+++|||.+|+..
T Consensus 199 ~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 252 (325)
T 2q7v_A 199 ANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTA 252 (325)
T ss_dssp TCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCG
T ss_pred hcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChH
Confidence 4469999887 45555322 3444 34334789999999999888753
No 291
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=85.48 E-value=3.8 Score=33.27 Aligned_cols=83 Identities=14% Similarity=0.197 Sum_probs=48.3
Q ss_pred eEEeeceEec----------CCceEEEeccC-CcccccccchhhHHHHhhcCceEEeeE-EEEe---eC---cE--EEe-
Q psy7674 42 NIFIHGKHID----------NNSVVIFSKSW-CPFCTKAKENNYEKELEKNKIDYFNAK-AVFV---DK---HR--VKF- 100 (164)
Q Consensus 42 ~v~i~~~~ig----------~d~vvv~~~~~-cp~~~~~~~~~~~~~l~~~gv~~~~~~-~~~~---~~---~~--v~v- 100 (164)
.++|++-.++ ...++++.+.. .+.........+.+.+++.||+++.+. +..+ +. .. +.+
T Consensus 213 vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~ 292 (519)
T 3qfa_A 213 TLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQ 292 (519)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEE
T ss_pred EEEECCcHHHHHHHHHHHHcCCeEEEEecccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEE
Confidence 4556664454 55677776642 222222223345677889999999873 2333 21 22 222
Q ss_pred --CCee-EEEEeceEEEecCCCCCCCC
Q psy7674 101 --AGEE-RTVSAQNFIIAVGGRPTYPD 124 (164)
Q Consensus 101 --~~~~-~~~~~d~liiAtGs~~~~p~ 124 (164)
++.. ..+.+|.+++|+|-+|+...
T Consensus 293 ~~~g~~~~~~~~D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 293 STNSEEIIEGEYNTVMLAIGRDACTRK 319 (519)
T ss_dssp ESSSSCEEEEEESEEEECSCEEESCSS
T ss_pred ECCCcEEEEEECCEEEEecCCcccCCC
Confidence 2311 35789999999999887643
No 292
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=85.32 E-value=0.42 Score=31.99 Aligned_cols=33 Identities=3% Similarity=0.076 Sum_probs=20.5
Q ss_pred ceEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... ..+.+.+++.++.++
T Consensus 38 vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv 72 (152)
T 2lrt_A 38 VLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIY 72 (152)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEE
Confidence 355577899999997542 223344555567664
No 293
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=85.16 E-value=0.24 Score=32.46 Aligned_cols=19 Identities=16% Similarity=0.613 Sum_probs=15.3
Q ss_pred CCceEEEeccCCccccccc
Q psy7674 52 NNSVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 52 ~d~vvv~~~~~cp~~~~~~ 70 (164)
...+++|.++||++|..-.
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~ 37 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWD 37 (116)
T ss_dssp CEEEEEEECTTCHHHHHHH
T ss_pred CCEEEEEECCCCHHHHHHH
Confidence 3458889999999999753
No 294
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=85.10 E-value=0.38 Score=30.54 Aligned_cols=18 Identities=22% Similarity=0.779 Sum_probs=14.8
Q ss_pred CceEEEeccCCccccccc
Q psy7674 53 NSVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~ 70 (164)
..++.|..+||++|+...
T Consensus 27 ~vlv~f~a~wC~~C~~~~ 44 (121)
T 2djj_A 27 DVLIEFYAPWCGHCKALA 44 (121)
T ss_dssp CEEEEEECSSCTTHHHHH
T ss_pred CEEEEEECCCCHhHHHhh
Confidence 356679999999999875
No 295
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=85.04 E-value=0.38 Score=32.20 Aligned_cols=33 Identities=21% Similarity=0.574 Sum_probs=20.2
Q ss_pred ceEEEeccCCcccccccch--hhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKEN--NYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~--~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|...... .+.+.+...++.++
T Consensus 37 vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v 71 (165)
T 3or5_A 37 YIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFV 71 (165)
T ss_dssp EEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred EEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEE
Confidence 3455889999999976522 23334444456653
No 296
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=84.96 E-value=0.39 Score=31.51 Aligned_cols=34 Identities=12% Similarity=0.297 Sum_probs=21.9
Q ss_pred ceEEEeccCCcccccccch--h---hHHHHhhcCceEEe
Q psy7674 54 SVVIFSKSWCPFCTKAKEN--N---YEKELEKNKIDYFN 87 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~--~---~~~~l~~~gv~~~~ 87 (164)
.++.|-.+|||+|+..... . +.+.+++.++.++.
T Consensus 34 vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~ 72 (142)
T 3eur_A 34 TLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLS 72 (142)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEE
T ss_pred EEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEE
Confidence 3455889999999986421 2 34455556777643
No 297
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.91 E-value=0.54 Score=30.16 Aligned_cols=17 Identities=29% Similarity=0.929 Sum_probs=14.5
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 25 vlv~f~a~wC~~C~~~~ 41 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQ 41 (126)
T ss_dssp EEEEEECSSCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHh
Confidence 46779999999999875
No 298
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=84.87 E-value=1.4 Score=32.91 Aligned_cols=50 Identities=28% Similarity=0.469 Sum_probs=33.7
Q ss_pred hHHHHhhcCceEEee-EEEEeeC--c---EEEe----CCeeEEEEeceEEEecCCCCCCC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVDK--H---RVKF----AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~~--~---~v~v----~~~~~~~~~d~liiAtGs~~~~p 123 (164)
+.+.+.+.||+++.+ .+..+.. . .+.+ +++...+.+|.+++|||.+|+..
T Consensus 196 l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 255 (319)
T 3cty_A 196 YVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTS 255 (319)
T ss_dssp HHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCG
T ss_pred HHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChH
Confidence 445667889999887 4455532 1 2444 34334689999999999888753
No 299
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=84.85 E-value=0.35 Score=30.27 Aligned_cols=17 Identities=35% Similarity=0.694 Sum_probs=12.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 24 ~~v~f~a~wC~~C~~~~ 40 (112)
T 3d6i_A 24 IVLYFHTSWAEPCKALK 40 (112)
T ss_dssp EEEEEECCC--CHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 45668899999999865
No 300
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=84.84 E-value=0.46 Score=29.89 Aligned_cols=17 Identities=18% Similarity=0.368 Sum_probs=13.8
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 20 ~lv~f~a~wC~~C~~~~ 36 (112)
T 2voc_A 20 VLADFWAPWCGPSKMIA 36 (112)
T ss_dssp EEEEEECTTBGGGGGHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 35668899999999876
No 301
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=84.80 E-value=0.3 Score=30.40 Aligned_cols=17 Identities=29% Similarity=0.520 Sum_probs=14.2
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 24 v~v~f~a~wC~~C~~~~ 40 (107)
T 1gh2_A 24 AVVKFTMRGCGPCLRIA 40 (107)
T ss_dssp EEEEEECSSCHHHHHHH
T ss_pred EEEEEECCCChhhHHHH
Confidence 46679999999999865
No 302
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=84.74 E-value=0.58 Score=30.88 Aligned_cols=33 Identities=12% Similarity=0.348 Sum_probs=19.9
Q ss_pred ceEEEeccCCcccccccch--hhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKEN--NYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~--~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|...... .+.+.+...++.++
T Consensus 31 ~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv 65 (153)
T 2l5o_A 31 TLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVL 65 (153)
T ss_dssp EEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEE
Confidence 4555788999999875421 22333444456654
No 303
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.51 E-value=0.52 Score=30.87 Aligned_cols=16 Identities=25% Similarity=0.548 Sum_probs=14.0
Q ss_pred eEEEeccCCccccccc
Q psy7674 55 VVIFSKSWCPFCTKAK 70 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~ 70 (164)
++.|..+|||+|+...
T Consensus 30 lv~f~a~wC~~C~~~~ 45 (137)
T 2dj0_A 30 IVEFFANWSNDCQSFA 45 (137)
T ss_dssp EEEECCTTCSTTTTTH
T ss_pred EEEEECCCCHHHHHHH
Confidence 6779999999999876
No 304
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=84.50 E-value=0.35 Score=32.26 Aligned_cols=32 Identities=16% Similarity=0.406 Sum_probs=18.7
Q ss_pred eEEEeccCCcccccc-cc--hhhHHHHhhcCceEE
Q psy7674 55 VVIFSKSWCPFCTKA-KE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 55 vvv~~~~~cp~~~~~-~~--~~~~~~l~~~gv~~~ 86 (164)
++.|..+|||+|... .. ..+.+.++..++.++
T Consensus 34 lv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v 68 (160)
T 3lor_A 34 VVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVI 68 (160)
T ss_dssp EEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEE
T ss_pred EEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEE
Confidence 445888999999874 31 122233334456654
No 305
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=84.47 E-value=1.8 Score=35.40 Aligned_cols=58 Identities=12% Similarity=0.170 Sum_probs=43.0
Q ss_pred CCccccccc-chhhHHHHhhcCceEE---eeEEEEeeCcEEEeCCeeEEEEeceEEEecCCCCC
Q psy7674 62 WCPFCTKAK-ENNYEKELEKNKIDYF---NAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 62 ~cp~~~~~~-~~~~~~~l~~~gv~~~---~~~~~~~~~~~v~v~~~~~~~~~d~liiAtGs~~~ 121 (164)
+-++|++.. ..+|-+.+.+-+|+++ ...+..++++.+.+.+ +.+.+|.+|.|||-++.
T Consensus 331 ~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~~d--~~~~~D~ii~atG~~~~ 392 (542)
T 1w4x_A 331 YPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE--REYELDSLVLATGFDAL 392 (542)
T ss_dssp SCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEESS--CEEECSEEEECCCCCCT
T ss_pred CCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEeCC--eEEecCEEEEcCCcccc
Confidence 334676653 3456677788899987 4567777777777754 57999999999998874
No 306
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=84.47 E-value=0.33 Score=30.91 Aligned_cols=17 Identities=29% Similarity=0.747 Sum_probs=14.2
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 33 vvv~F~a~wC~~C~~~~ 49 (114)
T 2oe3_A 33 LVIDFYATWCGPCKMMQ 49 (114)
T ss_dssp EEEEEECTTCHHHHHTH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 35668899999999876
No 307
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=84.47 E-value=0.28 Score=32.62 Aligned_cols=17 Identities=29% Similarity=0.719 Sum_probs=13.4
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 27 vlv~F~a~wC~~C~~~~ 43 (151)
T 3raz_A 27 RIVNLWATWCGPCRKEM 43 (151)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEEcCcCHHHHHHH
Confidence 34558899999999865
No 308
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=84.46 E-value=0.31 Score=30.56 Aligned_cols=17 Identities=18% Similarity=0.364 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 27 vlv~f~a~wC~~C~~~~ 43 (111)
T 2pu9_C 27 VVLDMFTQWCGPSKAMA 43 (111)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCcCHhHHHHC
Confidence 45668899999999765
No 309
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=84.41 E-value=0.62 Score=33.28 Aligned_cols=33 Identities=9% Similarity=0.034 Sum_probs=20.5
Q ss_pred ceEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|-.+|||+|+.... ..+.+.++..++.++
T Consensus 50 vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv 84 (208)
T 2f8a_A 50 LLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVL 84 (208)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEE
Confidence 345588899999987432 223344555677664
No 310
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=84.40 E-value=0.31 Score=30.04 Aligned_cols=17 Identities=29% Similarity=0.665 Sum_probs=14.2
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 20 ~~v~f~~~~C~~C~~~~ 36 (105)
T 1nsw_A 20 VLVDFWAAWCGPCRMMA 36 (105)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 46778899999999765
No 311
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=84.37 E-value=1.9 Score=33.81 Aligned_cols=46 Identities=15% Similarity=0.279 Sum_probs=32.4
Q ss_pred hhHHHHhhcCceEEeeE----EEEee--CcEEE-e---CCeeEEEEeceEEEecCCCC
Q psy7674 73 NYEKELEKNKIDYFNAK----AVFVD--KHRVK-F---AGEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~~----~~~~~--~~~v~-v---~~~~~~~~~d~liiAtGs~~ 120 (164)
.+.+.+++.|++++.++ ++.+. ...+. + ++ ..+.+|.+|+|||+..
T Consensus 166 ~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G--~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 166 AAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADG--KIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTT--EEEECSEEEECCGGGG
T ss_pred HHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCC--CEEECCEEEECCCCCh
Confidence 45566778899999874 65553 33333 3 44 5799999999999854
No 312
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=84.32 E-value=0.31 Score=30.41 Aligned_cols=17 Identities=35% Similarity=0.786 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 27 ~vv~f~~~~C~~C~~~~ 43 (112)
T 1ep7_A 27 IVVDFTATWCGPCKMIA 43 (112)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 36778899999999876
No 313
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=84.26 E-value=0.65 Score=32.04 Aligned_cols=33 Identities=9% Similarity=0.056 Sum_probs=20.5
Q ss_pred ceEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... ..+.+.+++.++.++
T Consensus 50 vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv 84 (183)
T 2obi_A 50 CIVTNVASQCGKTEVNYTQLVDLHARYAECGLRIL 84 (183)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEE
Confidence 344588899999987642 123344455567664
No 314
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=84.18 E-value=0.29 Score=32.87 Aligned_cols=34 Identities=18% Similarity=0.603 Sum_probs=20.3
Q ss_pred CceEEEeccCCcccccccch--hhHHHHhhcCceEE
Q psy7674 53 NSVVIFSKSWCPFCTKAKEN--NYEKELEKNKIDYF 86 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~~~--~~~~~l~~~gv~~~ 86 (164)
-.++.|..+|||+|...... .+.+.++..++.++
T Consensus 40 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv 75 (164)
T 2h30_A 40 PTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLI 75 (164)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEE
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEE
Confidence 34666889999999976521 12222334466654
No 315
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=84.10 E-value=0.32 Score=29.91 Aligned_cols=17 Identities=24% Similarity=0.352 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 22 ~lv~f~~~~C~~C~~~~ 38 (106)
T 3die_A 22 QLVDFWATACGPCKMIA 38 (106)
T ss_dssp EEEEEECSBCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHh
Confidence 35668899999999875
No 316
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=84.03 E-value=0.46 Score=37.44 Aligned_cols=21 Identities=29% Similarity=0.444 Sum_probs=18.2
Q ss_pred CCCcEEEECCcHHHHHhhccc
Q psy7674 143 DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l 163 (164)
.+.+|+|||||..|+-+|..|
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L 63 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLL 63 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHH
Confidence 357899999999999999766
No 317
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=83.93 E-value=0.33 Score=30.51 Aligned_cols=17 Identities=35% Similarity=0.735 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|+...
T Consensus 27 vlv~f~a~wC~~C~~~~ 43 (109)
T 3f3q_A 27 VVVDFYATWCGPCKMIA 43 (109)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCcCHhHHHHH
Confidence 35669999999999865
No 318
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=83.88 E-value=0.45 Score=29.68 Aligned_cols=18 Identities=33% Similarity=0.689 Sum_probs=14.5
Q ss_pred CceEEEeccCCccccccc
Q psy7674 53 NSVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~ 70 (164)
..++.|..+|||+|....
T Consensus 27 ~~lv~f~~~~C~~C~~~~ 44 (115)
T 1thx_A 27 PVLVYFWASWCGPCQLMS 44 (115)
T ss_dssp CEEEEEECTTCTTHHHHH
T ss_pred eEEEEEECCCCHHHHHhH
Confidence 346678899999999765
No 319
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=83.88 E-value=0.34 Score=31.16 Aligned_cols=18 Identities=22% Similarity=0.947 Sum_probs=14.7
Q ss_pred CceEEEeccCCccccccc
Q psy7674 53 NSVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~ 70 (164)
..++.|..+|||+|....
T Consensus 28 ~~lv~f~a~wC~~C~~~~ 45 (126)
T 2l57_A 28 PTIIMFKTDTCPYCVEMQ 45 (126)
T ss_dssp CEEEEEECSSCHHHHHHH
T ss_pred cEEEEEECCCCccHHHHH
Confidence 456669999999999865
No 320
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=83.86 E-value=0.34 Score=30.31 Aligned_cols=17 Identities=29% Similarity=0.720 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 26 ~vv~f~~~~C~~C~~~~ 42 (112)
T 1t00_A 26 VLVDFWAAWCGPCRQIA 42 (112)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHhHHhcC
Confidence 46678999999999765
No 321
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=83.74 E-value=0.35 Score=29.48 Aligned_cols=17 Identities=35% Similarity=0.712 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 19 ~~v~f~~~~C~~C~~~~ 35 (104)
T 2e0q_A 19 AVVDFWAEWCAPCLILA 35 (104)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCChhHHHHh
Confidence 45668899999999876
No 322
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=83.71 E-value=0.37 Score=31.17 Aligned_cols=17 Identities=24% Similarity=0.851 Sum_probs=14.2
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 28 vlv~f~a~wC~~C~~~~ 44 (133)
T 2dj3_A 28 VLIEFYAPWCGHCKQLE 44 (133)
T ss_dssp EEEEECCTTCSHHHHHH
T ss_pred EEEEEECCCChhHHHHH
Confidence 45668999999999876
No 323
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=83.65 E-value=0.35 Score=30.98 Aligned_cols=17 Identities=24% Similarity=0.587 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|+...
T Consensus 40 ~vv~f~a~wC~~C~~~~ 56 (124)
T 1faa_A 40 VVLDMFTQWCGPCKAMA 56 (124)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCcCHhHHHHh
Confidence 45668899999999866
No 324
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=83.59 E-value=0.48 Score=30.94 Aligned_cols=17 Identities=29% Similarity=0.540 Sum_probs=13.3
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 36 vll~F~~~~C~~C~~~~ 52 (148)
T 3fkf_A 36 LLLNFWASWCDPQPEAN 52 (148)
T ss_dssp EEEEEECGGGCCCHHHH
T ss_pred EEEEEECCCCHHHHHHh
Confidence 34558899999999765
No 325
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=83.56 E-value=0.35 Score=29.94 Aligned_cols=17 Identities=29% Similarity=0.636 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 23 ~~v~f~~~~C~~C~~~~ 39 (108)
T 2trx_A 23 ILVDFWAEWCGPCKMIA 39 (108)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHhHHHHH
Confidence 36678899999999865
No 326
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=83.54 E-value=0.36 Score=29.70 Aligned_cols=17 Identities=47% Similarity=0.886 Sum_probs=13.9
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 23 ~~v~f~~~~C~~C~~~~ 39 (105)
T 3m9j_A 23 VVVDFSATWCGPCKMIK 39 (105)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCChhhHHHH
Confidence 35668899999998875
No 327
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=83.54 E-value=0.35 Score=30.64 Aligned_cols=17 Identities=35% Similarity=0.747 Sum_probs=14.2
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 36 ~vv~f~a~wC~~C~~~~ 52 (117)
T 2xc2_A 36 VVVDFFATWCGPCKTIA 52 (117)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHhHHHHh
Confidence 46678999999999876
No 328
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=83.38 E-value=0.3 Score=39.61 Aligned_cols=20 Identities=15% Similarity=0.076 Sum_probs=17.6
Q ss_pred CcEEEECCcHHHHHhhcccC
Q psy7674 145 GKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l~ 164 (164)
.+|+|||||+.|+.+|..|+
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~ 128 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQ 128 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHT
T ss_pred CCEEEECccHHHHHHHHHHH
Confidence 47999999999999998763
No 329
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=83.33 E-value=0.41 Score=31.43 Aligned_cols=17 Identities=41% Similarity=0.931 Sum_probs=14.2
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 43 vvv~F~a~wC~~C~~~~ 59 (133)
T 3cxg_A 43 IVIKFGAVWCKPCNKIK 59 (133)
T ss_dssp EEEEEECTTCHHHHHTH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 35668999999999875
No 330
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=83.20 E-value=2.7 Score=32.36 Aligned_cols=48 Identities=19% Similarity=0.153 Sum_probs=33.9
Q ss_pred hhHHHHhhcCceEEee-EEEEeeCc-EEEe-CCeeEEEEeceEEEecCCCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVDKH-RVKF-AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~~~-~v~v-~~~~~~~~~d~liiAtGs~~~~ 122 (164)
.+.+.+++.|++++.+ +++.++.. .+++ ++ ..+.+|.+|.|+|..+.+
T Consensus 112 ~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g--~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 112 ALVNRARALGVDISVNSEAVAADPVGRLTLQTG--EVLEADLIVGADGVGSKV 162 (379)
T ss_dssp HHHHHHHHTTCEEESSCCEEEEETTTEEEETTS--CEEECSEEEECCCTTCHH
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCC--CEEEcCEEEECCCccHHH
Confidence 3456667789999887 45555322 4555 45 579999999999988753
No 331
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=83.20 E-value=0.37 Score=29.54 Aligned_cols=17 Identities=29% Similarity=0.638 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 21 ~~v~f~~~~C~~C~~~~ 37 (105)
T 1fb6_A 21 VMVDFWAPWCGPCKLIA 37 (105)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCChHHHHHH
Confidence 46678899999999865
No 332
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=83.19 E-value=0.37 Score=29.77 Aligned_cols=17 Identities=29% Similarity=0.636 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 22 ~lv~f~~~~C~~C~~~~ 38 (107)
T 1dby_A 22 VLVDFWAPWCGPCRIIA 38 (107)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHhHHHHH
Confidence 46678899999999875
No 333
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=83.18 E-value=0.38 Score=37.54 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=16.9
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
-.|+|||||..|+.+|..|
T Consensus 80 ~DVvIVGgG~AGL~aA~~L 98 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVL 98 (344)
T ss_dssp CSEEEECCSHHHHHHHHHH
T ss_pred CCEEEECccHHHHHHHHHH
Confidence 4799999999999999765
No 334
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=83.18 E-value=0.77 Score=31.22 Aligned_cols=32 Identities=13% Similarity=0.220 Sum_probs=19.9
Q ss_pred ceEEEeccCCcccccccch--hhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKEN--NYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~--~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||.|. .... .+.+.+++.++.++
T Consensus 35 vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv 68 (171)
T 3cmi_A 35 VLIVNVASKCGFTP-QYKELEALYKRYKDEGFTII 68 (171)
T ss_dssp EEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEE
Confidence 34557889999999 5321 23344555567764
No 335
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=83.16 E-value=0.37 Score=30.31 Aligned_cols=17 Identities=29% Similarity=0.792 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 31 ~vv~f~~~~C~~C~~~~ 47 (118)
T 2vm1_A 31 VIIDFTASWCGPCRVIA 47 (118)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHhHHHHh
Confidence 36678899999999875
No 336
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=83.10 E-value=0.38 Score=30.82 Aligned_cols=17 Identities=29% Similarity=0.743 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 26 vlv~f~a~wC~~C~~~~ 42 (118)
T 2f51_A 26 VLVDFFATWCGPCQRLG 42 (118)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 45668999999999865
No 337
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=83.07 E-value=0.38 Score=29.44 Aligned_cols=17 Identities=35% Similarity=0.714 Sum_probs=13.8
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 22 ~~v~f~~~~C~~C~~~~ 38 (104)
T 2vim_A 22 IVVDFFAQWCGPCRNIA 38 (104)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHhh
Confidence 35668899999999876
No 338
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=83.04 E-value=0.6 Score=34.18 Aligned_cols=31 Identities=19% Similarity=0.598 Sum_probs=20.1
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.+++|+..|||||..... .+..++++.+|++
T Consensus 100 ~v~~F~D~~Cp~C~~~~~-~l~~~~~~g~v~v 130 (241)
T 1v58_A 100 IVYVFADPFCPYCKQFWQ-QARPWVDSGKVQL 130 (241)
T ss_dssp EEEEEECTTCHHHHHHHH-HHHHHHHTTSEEE
T ss_pred EEEEEECCCChhHHHHHH-HHHHHHhCCcEEE
Confidence 577799999999997642 1223344434665
No 339
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=82.91 E-value=0.51 Score=30.25 Aligned_cols=17 Identities=29% Similarity=0.761 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 39 ~vv~f~~~~C~~C~~~~ 55 (130)
T 1wmj_A 39 VIIDFTASWCGPCRFIA 55 (130)
T ss_dssp CBEECCSSSCSCSSSSH
T ss_pred EEEEEECCCChhHHHHH
Confidence 45668889999999876
No 340
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=82.89 E-value=1.5 Score=32.47 Aligned_cols=48 Identities=17% Similarity=0.311 Sum_probs=31.5
Q ss_pred HHHh-hcCceEEee-EEEEeeC--c---EEEe----CCeeEEEEeceEEEecCCCCCCC
Q psy7674 76 KELE-KNKIDYFNA-KAVFVDK--H---RVKF----AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 76 ~~l~-~~gv~~~~~-~~~~~~~--~---~v~v----~~~~~~~~~d~liiAtGs~~~~p 123 (164)
+.+. +.||+++.+ .+..++. . .+.+ +++...+.+|.+++|+|.+|+.+
T Consensus 186 ~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 244 (311)
T 2q0l_A 186 EHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNA 244 (311)
T ss_dssp HHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCG
T ss_pred HHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChh
Confidence 3444 479999877 4455532 2 2444 24334789999999999988754
No 341
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=82.86 E-value=0.39 Score=31.10 Aligned_cols=16 Identities=44% Similarity=0.841 Sum_probs=13.5
Q ss_pred eEEEeccCCccccccc
Q psy7674 55 VVIFSKSWCPFCTKAK 70 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~ 70 (164)
++.|..+|||+|....
T Consensus 42 vv~f~a~wC~~C~~~~ 57 (124)
T 1xfl_A 42 VVDFTASWCGPCRFIA 57 (124)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEECCCCHHHHHHH
Confidence 5668899999999876
No 342
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=82.85 E-value=0.4 Score=37.12 Aligned_cols=19 Identities=32% Similarity=0.331 Sum_probs=16.8
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
-+|+|||||+.|+.+|..|
T Consensus 66 ~dv~IiG~G~aGl~aA~~l 84 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVI 84 (326)
T ss_dssp ESEEEECCSHHHHHHHHHH
T ss_pred CCEEEECccHHHHHHHHHH
Confidence 3799999999999998765
No 343
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=82.84 E-value=0.39 Score=30.57 Aligned_cols=18 Identities=33% Similarity=0.739 Sum_probs=14.5
Q ss_pred ceEEEeccCCcccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAKE 71 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~ 71 (164)
.++.|..+|||+|.....
T Consensus 37 ~vv~f~~~~C~~C~~~~~ 54 (122)
T 2vlu_A 37 VVIDFTASWCGPCRIMAP 54 (122)
T ss_dssp EEEEEECTTCHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHH
Confidence 466788999999998763
No 344
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=82.72 E-value=0.38 Score=29.89 Aligned_cols=17 Identities=12% Similarity=0.362 Sum_probs=13.8
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 21 vlv~f~a~wC~~C~~~~ 37 (105)
T 4euy_A 21 VLLFIKTENCGVCDVML 37 (105)
T ss_dssp EEEEEEESSCHHHHHHH
T ss_pred EEEEEeCCCCcchHHHH
Confidence 35558999999999865
No 345
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=82.71 E-value=2.4 Score=31.41 Aligned_cols=48 Identities=13% Similarity=0.326 Sum_probs=32.2
Q ss_pred HHHHhh-cCceEEee-EEEEeeCc-----EEEe-C---CeeEEEEeceEEEecCCCCCC
Q psy7674 75 EKELEK-NKIDYFNA-KAVFVDKH-----RVKF-A---GEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 75 ~~~l~~-~gv~~~~~-~~~~~~~~-----~v~v-~---~~~~~~~~d~liiAtGs~~~~ 122 (164)
.+.+++ .||+++.+ .+..++.. .+.+ + ++...+.+|.+++|+|.+|+.
T Consensus 186 ~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 244 (310)
T 1fl2_A 186 QDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNT 244 (310)
T ss_dssp HHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESC
T ss_pred HHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCc
Confidence 445666 69999987 45555321 2444 2 333478999999999988865
No 346
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=82.69 E-value=0.38 Score=31.53 Aligned_cols=18 Identities=28% Similarity=0.709 Sum_probs=14.8
Q ss_pred CceEEEeccCCccccccc
Q psy7674 53 NSVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~ 70 (164)
..++.|..+|||+|....
T Consensus 40 ~~lv~f~a~wC~~C~~~~ 57 (136)
T 2l5l_A 40 PAIVDFYADWCGPCKMVA 57 (136)
T ss_dssp CEEEEEECTTSHHHHHHH
T ss_pred EEEEEEECCcCHHHHHHH
Confidence 346779999999999875
No 347
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=82.65 E-value=0.53 Score=30.81 Aligned_cols=18 Identities=28% Similarity=0.709 Sum_probs=14.5
Q ss_pred CceEEEeccCCccccccc
Q psy7674 53 NSVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~ 70 (164)
..++.|..+|||+|....
T Consensus 53 ~vlv~f~a~wC~~C~~~~ 70 (141)
T 3hxs_A 53 PAIVDFYADWCGPCKMVA 70 (141)
T ss_dssp CEEEEEECTTCTTHHHHH
T ss_pred EEEEEEECCCCHHHHHHH
Confidence 346668999999999865
No 348
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=82.60 E-value=0.52 Score=34.54 Aligned_cols=16 Identities=25% Similarity=0.654 Sum_probs=13.6
Q ss_pred eEEEeccCCccccccc
Q psy7674 55 VVIFSKSWCPFCTKAK 70 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~ 70 (164)
+++|.++|||+|....
T Consensus 142 vv~F~a~wC~~C~~~~ 157 (243)
T 2hls_A 142 IETIITPSCPYCPYAV 157 (243)
T ss_dssp EEEEECSSCSSHHHHH
T ss_pred EEEEECCCCCCcHHHH
Confidence 4569999999999876
No 349
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=82.57 E-value=0.41 Score=29.47 Aligned_cols=17 Identities=29% Similarity=0.682 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 21 ~lv~f~~~~C~~C~~~~ 37 (109)
T 2yzu_A 21 VLVDFWAEWCAPCRMIA 37 (109)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHhh
Confidence 45668899999999865
No 350
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=82.56 E-value=0.4 Score=39.85 Aligned_cols=19 Identities=32% Similarity=0.321 Sum_probs=16.9
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
-+|+|||||..|+-+|..|
T Consensus 36 ~DVvIVGaG~aGlaaA~~L 54 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRL 54 (584)
T ss_dssp CSEEEECCSHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHH
Confidence 4699999999999999776
No 351
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.52 E-value=0.44 Score=30.71 Aligned_cols=17 Identities=29% Similarity=0.794 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|+...
T Consensus 28 ~lv~f~a~wC~~C~~~~ 44 (133)
T 1x5d_A 28 WMVEFYAPWCGHCKNLE 44 (133)
T ss_dssp EEEEEECTTCHHHHTHH
T ss_pred EEEEEECCCCHHHHhhc
Confidence 35668999999999865
No 352
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=82.46 E-value=0.41 Score=29.50 Aligned_cols=17 Identities=24% Similarity=0.518 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 24 ~lv~f~~~~C~~C~~~~ 40 (109)
T 3tco_A 24 VLVDCWAEWCAPCHLYE 40 (109)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHhhh
Confidence 35668899999999865
No 353
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=82.46 E-value=1 Score=36.55 Aligned_cols=52 Identities=13% Similarity=0.060 Sum_probs=34.0
Q ss_pred hHHHHhhcCceEEee-EEEEeeC-----c--EEEe-CC-ee--EEEEeceEEEecCCCCCCCCC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVDK-----H--RVKF-AG-EE--RTVSAQNFIIAVGGRPTYPDI 125 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~~-----~--~v~v-~~-~~--~~~~~d~liiAtGs~~~~p~i 125 (164)
+.+.+++.|++++.+ +++.+.. . .+.+ +. ++ ..+.+|++|+|||+++.....
T Consensus 172 L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~ 235 (497)
T 2bry_A 172 LLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGF 235 (497)
T ss_dssp HHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTC
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccccc
Confidence 345566679999887 4555532 1 3444 11 22 358999999999998876544
No 354
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=82.43 E-value=0.41 Score=30.07 Aligned_cols=17 Identities=29% Similarity=0.767 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 29 vlv~f~a~~C~~C~~~~ 45 (112)
T 1syr_A 29 VIVDFFAEWCGPCKRIA 45 (112)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 35668899999999876
No 355
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=82.38 E-value=0.42 Score=29.36 Aligned_cols=16 Identities=31% Similarity=0.760 Sum_probs=13.5
Q ss_pred eEEEeccCCccccccc
Q psy7674 55 VVIFSKSWCPFCTKAK 70 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~ 70 (164)
++.|..+|||+|....
T Consensus 24 vv~f~~~~C~~C~~~~ 39 (106)
T 1xwb_A 24 VLDFFATWCGPCKMIS 39 (106)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEECCcCHHHHHhh
Confidence 5678889999999765
No 356
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=82.38 E-value=0.43 Score=29.59 Aligned_cols=17 Identities=24% Similarity=0.819 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 24 ~lv~f~~~~C~~C~~~~ 40 (111)
T 3uvt_A 24 TFIKFYAPWCGHCKTLA 40 (111)
T ss_dssp EEEEEECSSCHHHHHHH
T ss_pred EEEEEECCCChhHHHhh
Confidence 36678999999999765
No 357
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=82.18 E-value=0.43 Score=29.36 Aligned_cols=17 Identities=29% Similarity=0.637 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 23 ~lv~f~~~~C~~C~~~~ 39 (107)
T 2i4a_A 23 VLVDFWAEWCGPCKMIG 39 (107)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCChhHHHHh
Confidence 35668899999999875
No 358
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=82.17 E-value=0.44 Score=29.59 Aligned_cols=17 Identities=35% Similarity=0.815 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 25 vlv~f~a~~C~~C~~~~ 41 (111)
T 3gnj_A 25 CLVMFSRKNCHVCQKVT 41 (111)
T ss_dssp EEEEEECSSCHHHHHHH
T ss_pred EEEEEeCCCChhHHHHH
Confidence 46779999999999865
No 359
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=82.07 E-value=0.43 Score=30.36 Aligned_cols=17 Identities=41% Similarity=0.663 Sum_probs=13.9
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|+...
T Consensus 34 vlv~F~a~wC~~C~~~~ 50 (116)
T 3qfa_C 34 VVVDFSATWCGPSKMIK 50 (116)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 35668899999999866
No 360
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=82.01 E-value=0.45 Score=42.31 Aligned_cols=20 Identities=30% Similarity=0.516 Sum_probs=17.9
Q ss_pred CCcEEEECCcHHHHHhhccc
Q psy7674 144 PGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 144 ~~~vvViGgG~~g~E~A~~l 163 (164)
.++|+|||||+.|+.+|..|
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L 206 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFL 206 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHH
Confidence 46899999999999999876
No 361
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=81.90 E-value=0.44 Score=39.33 Aligned_cols=19 Identities=21% Similarity=0.209 Sum_probs=17.0
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
.+|+|||||..|+.+|..|
T Consensus 127 ~DVvVVGaG~aGl~aA~~l 145 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISA 145 (571)
T ss_dssp CSEEEECCSHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHH
Confidence 5799999999999999765
No 362
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=81.84 E-value=0.44 Score=39.51 Aligned_cols=19 Identities=32% Similarity=0.357 Sum_probs=16.7
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
-.|+|||||.+|+-+|..|
T Consensus 50 ~DVvIVGaG~aGL~~A~~L 68 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGEL 68 (570)
T ss_dssp -CEEEECCSHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHH
Confidence 4699999999999999876
No 363
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=81.80 E-value=0.46 Score=29.59 Aligned_cols=16 Identities=50% Similarity=1.078 Sum_probs=13.4
Q ss_pred eEEEeccCCccccccc
Q psy7674 55 VVIFSKSWCPFCTKAK 70 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~ 70 (164)
++.|..+|||+|....
T Consensus 30 vv~f~~~~C~~C~~~~ 45 (113)
T 1ti3_A 30 VVDFTASWCPPCKMIA 45 (113)
T ss_dssp EEEEECSSCHHHHHHH
T ss_pred EEEEECCCCHHHHHHH
Confidence 5668889999999765
No 364
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=81.65 E-value=0.62 Score=29.80 Aligned_cols=17 Identities=29% Similarity=0.688 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 36 vvv~f~a~~C~~C~~~~ 52 (121)
T 2j23_A 36 VVIDFWATWCGPCKMIG 52 (121)
T ss_dssp EEEEEECTTCSTHHHHH
T ss_pred EEEEEECCCCHhHHHHH
Confidence 45678899999999865
No 365
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=81.42 E-value=0.55 Score=31.24 Aligned_cols=15 Identities=27% Similarity=0.474 Sum_probs=12.0
Q ss_pred eEEEeccCCcccccc
Q psy7674 55 VVIFSKSWCPFCTKA 69 (164)
Q Consensus 55 vvv~~~~~cp~~~~~ 69 (164)
++.|..+|||+|...
T Consensus 32 lv~f~a~wC~~C~~~ 46 (158)
T 3eyt_A 32 VIEAFQMLCPGCVMH 46 (158)
T ss_dssp EEEEECTTCHHHHHT
T ss_pred EEEEECCcCcchhhh
Confidence 444788999999984
No 366
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=81.32 E-value=0.39 Score=31.17 Aligned_cols=17 Identities=24% Similarity=0.933 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|+...
T Consensus 32 vlv~f~a~wC~~C~~~~ 48 (133)
T 3fk8_A 32 TLLVFGANWCTDCRALD 48 (133)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEcCCCCHHHHHHH
Confidence 35668999999999876
No 367
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=81.30 E-value=0.47 Score=30.81 Aligned_cols=17 Identities=41% Similarity=1.026 Sum_probs=13.4
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 37 ~ll~f~~~~C~~C~~~~ 53 (145)
T 3erw_A 37 TILHFWTSWCPPCKKEL 53 (145)
T ss_dssp EEEEEECSSCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 35558899999999864
No 368
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=81.28 E-value=2 Score=34.38 Aligned_cols=32 Identities=22% Similarity=0.393 Sum_probs=23.6
Q ss_pred eeCcEEEe-CCeeEEEEeceEEEecCCCCCCCCCC
Q psy7674 93 VDKHRVKF-AGEERTVSAQNFIIAVGGRPTYPDIP 126 (164)
Q Consensus 93 ~~~~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i~ 126 (164)
++...+.+ +| +.+.+|.+|+|||-+|..|-++
T Consensus 250 i~~~~V~~~dG--~~i~~D~Vi~atG~~p~~~~l~ 282 (464)
T 2xve_A 250 VDTENAYFADG--SSEKVDAIILCTGYIHHFPFLN 282 (464)
T ss_dssp ECSSEEEETTS--CEEECSEEEECCCBCCCCTTBC
T ss_pred EeCCEEEECCC--CEEeCCEEEECCCCCCCCCCcC
Confidence 34445555 55 5789999999999998876554
No 369
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=81.26 E-value=0.52 Score=30.74 Aligned_cols=17 Identities=24% Similarity=0.772 Sum_probs=14.2
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+||++|+...
T Consensus 37 vlv~f~a~wC~~C~~~~ 53 (140)
T 2dj1_A 37 VLLEFYAPWCGHCKQFA 53 (140)
T ss_dssp EEEEECCTTCHHHHTTH
T ss_pred EEEEEECCCCHHHHHhh
Confidence 36778999999999875
No 370
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=81.23 E-value=0.78 Score=31.48 Aligned_cols=29 Identities=17% Similarity=0.409 Sum_probs=18.3
Q ss_pred eEEEeccCCcccccccc--hhhHHHHhhcCc
Q psy7674 55 VVIFSKSWCPFCTKAKE--NNYEKELEKNKI 83 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv 83 (164)
++.|..+|||+|..... ..+.+.++..++
T Consensus 63 lv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~ 93 (183)
T 3lwa_A 63 ILNAWGQWCAPCRSESDDLQIIHEELQAAGN 93 (183)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHHHHCC-
T ss_pred EEEEECCcCHhHHHHHHHHHHHHHHHHhcCC
Confidence 44477899999997642 233445566666
No 371
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=81.18 E-value=0.66 Score=31.28 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=21.5
Q ss_pred ceEEEe-ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFS-KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~-~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|. .+|||+|..... ..+.+.+++.|+.++
T Consensus 32 vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv 67 (161)
T 3drn_A 32 IVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVI 67 (161)
T ss_dssp EEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEE
T ss_pred EEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEE
Confidence 455577 899999998642 233445556677764
No 372
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=81.09 E-value=0.55 Score=30.57 Aligned_cols=17 Identities=24% Similarity=0.421 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 43 vlv~F~a~wC~~C~~~~ 59 (128)
T 2o8v_B 43 ILVDFWAEWCGPAKMIA 59 (128)
T ss_dssp EEEEEECSSCHHHHHTH
T ss_pred EEEEEECCCCHHHHHHh
Confidence 45668999999999875
No 373
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=81.05 E-value=0.5 Score=30.06 Aligned_cols=17 Identities=35% Similarity=0.680 Sum_probs=14.3
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 24 ~lv~f~a~~C~~C~~~~ 40 (122)
T 3aps_A 24 WVVDFYAPWCGPCQNFA 40 (122)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 46779999999999865
No 374
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=80.95 E-value=0.46 Score=31.19 Aligned_cols=31 Identities=10% Similarity=0.308 Sum_probs=19.9
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~ 85 (164)
.++.|..+|||+|+.... .+.++.+++++.+
T Consensus 34 vlv~F~a~wC~~C~~~~p-~l~~l~~~~~v~~ 64 (135)
T 3emx_A 34 AILAVYSKTCPHCHRDWP-QLIQASKEVDVPI 64 (135)
T ss_dssp EEEEEEETTCHHHHHHHH-HHHHHHTTCCSCE
T ss_pred EEEEEECCcCHhhhHhCh-hHHHHHHHCCCEE
Confidence 356688999999998652 2233444455554
No 375
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=80.90 E-value=0.41 Score=32.68 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=12.9
Q ss_pred ceEEEeccCCcccccc
Q psy7674 54 SVVIFSKSWCPFCTKA 69 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~ 69 (164)
.++.|..+|||+|+..
T Consensus 50 vlv~F~A~WC~~C~~~ 65 (172)
T 3f9u_A 50 VMLDFTGYGCVNCRKM 65 (172)
T ss_dssp EEEEEECTTCHHHHHH
T ss_pred EEEEEECCCCHHHHHH
Confidence 3555999999999974
No 376
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=80.82 E-value=0.55 Score=39.73 Aligned_cols=20 Identities=10% Similarity=0.107 Sum_probs=17.7
Q ss_pred CCcEEEECCcHHHHHhhccc
Q psy7674 144 PGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 144 ~~~vvViGgG~~g~E~A~~l 163 (164)
..+|+|||||.+|+-+|..|
T Consensus 264 ~~DVvIIGgGiaGlsaA~~L 283 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALAL 283 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHH
Confidence 36799999999999999876
No 377
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=80.72 E-value=0.52 Score=30.06 Aligned_cols=17 Identities=35% Similarity=0.708 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 34 vlv~f~a~~C~~C~~~~ 50 (119)
T 1w4v_A 34 VVVDFHAQWCGPCKILG 50 (119)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 46678899999999865
No 378
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=80.65 E-value=0.5 Score=39.82 Aligned_cols=19 Identities=5% Similarity=-0.001 Sum_probs=17.2
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
.+|+|||||.+|+-+|..|
T Consensus 273 ~DVvIIGgGiaGlsaA~~L 291 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLAL 291 (676)
T ss_dssp CEEEEECCSHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHH
Confidence 6899999999999999776
No 379
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=80.64 E-value=0.43 Score=31.26 Aligned_cols=17 Identities=18% Similarity=0.630 Sum_probs=13.6
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|+...
T Consensus 34 vlv~F~a~wC~~C~~~~ 50 (134)
T 2fwh_A 34 VMLDLYADWCVACKEFE 50 (134)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 45668899999999754
No 380
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=80.51 E-value=0.23 Score=37.89 Aligned_cols=23 Identities=26% Similarity=0.826 Sum_probs=18.7
Q ss_pred eEecCCceEEEeccCCccccccc
Q psy7674 48 KHIDNNSVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 48 ~~ig~d~vvv~~~~~cp~~~~~~ 70 (164)
+++....+++|.++|||+|+..+
T Consensus 194 ~~l~~~~vV~F~A~WC~~Ck~l~ 216 (291)
T 3kp9_A 194 AHLRQIGGTMYGAYWCPHCQDQK 216 (291)
T ss_dssp HHHHHTTCEEEECTTCHHHHHHH
T ss_pred HHhCCCCEEEEECCCCHHHHHHH
Confidence 34455668999999999999877
No 381
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=80.49 E-value=0.81 Score=32.74 Aligned_cols=33 Identities=18% Similarity=0.441 Sum_probs=20.8
Q ss_pred ceEEEeccCCcccccccch--hhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKEN--NYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~--~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|...... .+.+.+++.++.++
T Consensus 62 vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv 96 (218)
T 3u5r_E 62 LLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVV 96 (218)
T ss_dssp EEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEE
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEE
Confidence 4555888999999876422 23344455567664
No 382
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=80.48 E-value=0.81 Score=31.68 Aligned_cols=33 Identities=15% Similarity=0.499 Sum_probs=20.8
Q ss_pred ceEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... ..+.+.+.+.++.++
T Consensus 49 vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv 83 (196)
T 2ywi_A 49 TVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFV 83 (196)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEE
Confidence 466688999999986542 123334444567764
No 383
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=80.35 E-value=2.5 Score=31.91 Aligned_cols=48 Identities=19% Similarity=0.219 Sum_probs=31.9
Q ss_pred hhHHHHhhcCceEEee-EEEEee--C-c--EEEe-CCeeEEEEeceEEEecCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVD--K-H--RVKF-AGEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~--~-~--~v~v-~~~~~~~~~d~liiAtGs~~ 120 (164)
.+.+.+++.|++++.+ +++.+. . . .+.+ +++...+.+|.+|+|+|+..
T Consensus 155 ~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 155 AYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 3556677889999976 555553 2 2 2333 33224799999999999753
No 384
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=80.21 E-value=0.55 Score=29.68 Aligned_cols=17 Identities=29% Similarity=0.694 Sum_probs=14.4
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 33 ~lv~f~~~~C~~C~~~~ 49 (121)
T 2i1u_A 33 VLVDFWATWCGPCKMVA 49 (121)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 46779999999999876
No 385
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=80.19 E-value=0.55 Score=30.36 Aligned_cols=17 Identities=35% Similarity=0.829 Sum_probs=13.7
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|+...
T Consensus 45 vlv~F~a~wC~~C~~~~ 61 (128)
T 3ul3_B 45 IVLYFFAKWCQACTMQS 61 (128)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHh
Confidence 34558999999999865
No 386
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=80.05 E-value=0.42 Score=32.62 Aligned_cols=17 Identities=24% Similarity=0.346 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|.++||++|+.-.
T Consensus 47 VlV~F~A~WC~~Ck~m~ 63 (151)
T 3ph9_A 47 LMVIHHLEDCQYSQALK 63 (151)
T ss_dssp EEEEECCTTCHHHHHHH
T ss_pred EEEEEECCCCHhHHHHH
Confidence 45669999999999865
No 387
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=81.00 E-value=0.36 Score=29.51 Aligned_cols=17 Identities=29% Similarity=0.649 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 22 ~~v~f~~~~C~~C~~~~ 38 (106)
T 2yj7_A 22 VLVDFWAPWCGPCRMIA 38 (106)
Confidence 46668899999999876
No 388
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=79.82 E-value=0.42 Score=31.39 Aligned_cols=16 Identities=6% Similarity=0.048 Sum_probs=12.7
Q ss_pred eEEEeccCCccccccc
Q psy7674 55 VVIFSKSWCPFCTKAK 70 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~ 70 (164)
++.|..+|||+|....
T Consensus 36 ll~F~a~wC~~C~~~~ 51 (143)
T 4fo5_A 36 LLNFWAAYDAESRARN 51 (143)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEEcCcCHHHHHHH
Confidence 4458899999998764
No 389
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=79.72 E-value=0.52 Score=30.32 Aligned_cols=17 Identities=24% Similarity=0.571 Sum_probs=13.9
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 30 vlv~f~a~wC~~C~~~~ 46 (130)
T 2kuc_A 30 LFVDCFTTWCGPCKRLS 46 (130)
T ss_dssp EEEEECCTTCTHHHHHH
T ss_pred EEEEEECCCCccHHHHH
Confidence 45668899999999865
No 390
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=79.68 E-value=0.57 Score=38.64 Aligned_cols=19 Identities=26% Similarity=0.361 Sum_probs=16.7
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
-.|+|||||..|+.+|..|
T Consensus 122 ~DVvVVG~G~aGl~aA~~l 140 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAA 140 (566)
T ss_dssp EEEEEECCSHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHH
Confidence 3799999999999999765
No 391
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=79.44 E-value=1.7 Score=31.31 Aligned_cols=31 Identities=10% Similarity=0.221 Sum_probs=19.1
Q ss_pred ceEEEeccCCcccccccchhhHH---HHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEK---ELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~---~l~~~gv~~~ 86 (164)
.++.|.++|||+|. . ...+.+ .+++.|+.++
T Consensus 59 vll~FwAt~C~~c~-e-~p~L~~l~~~~~~~g~~Vl 92 (215)
T 2i3y_A 59 ILFVNVATYCGLTA-Q-YPELNALQEELKPYGLVVL 92 (215)
T ss_dssp EEEEEECSSSGGGG-G-HHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEeCCCCCChH-h-HHHHHHHHHHhccCCeEEE
Confidence 34448899999997 3 333333 3445567664
No 392
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=79.33 E-value=0.57 Score=32.03 Aligned_cols=17 Identities=47% Similarity=0.942 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|+...
T Consensus 49 vlv~F~a~WC~~C~~~~ 65 (164)
T 1sen_A 49 LMVIIHKSWCGACKALK 65 (164)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 45668899999999876
No 393
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=79.11 E-value=0.88 Score=30.93 Aligned_cols=17 Identities=41% Similarity=0.921 Sum_probs=13.2
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 51 vll~F~a~wC~~C~~~~ 67 (165)
T 3s9f_A 51 VFFYFSASWCPPCRGFT 67 (165)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCcChhHHHHH
Confidence 34458899999998765
No 394
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=79.08 E-value=3.4 Score=31.94 Aligned_cols=46 Identities=13% Similarity=0.235 Sum_probs=31.6
Q ss_pred hHHHHhhc-CceEEee-EEEEee--Cc----EEEe-CCeeEEEEeceEEEecCCCCC
Q psy7674 74 YEKELEKN-KIDYFNA-KAVFVD--KH----RVKF-AGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 74 ~~~~l~~~-gv~~~~~-~~~~~~--~~----~v~v-~~~~~~~~~d~liiAtGs~~~ 121 (164)
+.+.+++. |++++.+ +++.++ .. .+++ ++ +.+.+|.+|.|+|..+.
T Consensus 113 L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g--~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 113 VLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDG--RVLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTS--CEEEEEEEEECCCTTCH
T ss_pred HHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCC--CEEECCEEEECCCCChH
Confidence 44556666 8999877 555553 22 3444 44 57999999999998764
No 395
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=80.19 E-value=0.4 Score=30.93 Aligned_cols=17 Identities=29% Similarity=0.919 Sum_probs=13.9
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 22 vlv~f~a~wC~~C~~~~ 38 (130)
T 2lst_A 22 VMVYFHSEHCPYCQQMN 38 (130)
Confidence 45668899999998865
No 396
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=78.83 E-value=1.4 Score=30.31 Aligned_cols=33 Identities=24% Similarity=0.441 Sum_probs=20.5
Q ss_pred ceEEEe-ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFS-KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~-~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|- .+|||+|..... ..+.+.+++.++.++
T Consensus 34 vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv 69 (187)
T 1we0_A 34 SIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVY 69 (187)
T ss_dssp EEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEE
T ss_pred EEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEE
Confidence 355577 899999997542 123344555567664
No 397
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=78.78 E-value=2.8 Score=34.68 Aligned_cols=46 Identities=11% Similarity=0.172 Sum_probs=32.4
Q ss_pred hHHHHhhcCceEEee-EEEEee--CcE---EEe-CCeeEEEEeceEEEecCCCCC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVD--KHR---VKF-AGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~--~~~---v~v-~~~~~~~~~d~liiAtGs~~~ 121 (164)
+.+.+++.|++++.+ +++.+. ... +.+ ++ +.+.+|.+|+|+|.+++
T Consensus 226 L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G--~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 226 MRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNG--EEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTS--CEEECSCEEECCCTTCH
T ss_pred HHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCC--CEEECCEEEECCCCChh
Confidence 455667789999988 455552 222 334 44 57999999999999874
No 398
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=78.64 E-value=4.3 Score=32.22 Aligned_cols=45 Identities=18% Similarity=0.342 Sum_probs=31.3
Q ss_pred hHHHHhhcCceEEee-EEEEe--eCcE---EEe-CCeeEEEEeceEEEecCCCC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFV--DKHR---VKF-AGEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~--~~~~---v~v-~~~~~~~~~d~liiAtGs~~ 120 (164)
+.+.+++.|++++.+ +++.+ +... +.+ ++ ..+.+|.+|+|||+.+
T Consensus 140 L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G--~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 140 LLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTG--EVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTC--CEEECSCEEECCCCSS
T ss_pred HHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCC--CEEECCEEEECCCCCc
Confidence 455667789999877 45554 3332 333 34 4689999999999876
No 399
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=78.57 E-value=0.72 Score=29.91 Aligned_cols=17 Identities=29% Similarity=0.837 Sum_probs=14.2
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 40 vvv~F~a~wC~~C~~~~ 56 (125)
T 1r26_A 40 TVAWFTAVWCGPCKTIE 56 (125)
T ss_dssp EEEEEECTTCHHHHHTH
T ss_pred EEEEEECCcCHhHHHHH
Confidence 45668899999999876
No 400
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=78.46 E-value=0.66 Score=37.22 Aligned_cols=19 Identities=21% Similarity=0.336 Sum_probs=17.0
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
.+|+|||||..|+-+|..|
T Consensus 40 ~~v~iiGaG~aGl~aA~~l 58 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDL 58 (495)
T ss_dssp EEEEEECCBHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHH
Confidence 4799999999999999766
No 401
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=78.30 E-value=1.6 Score=30.45 Aligned_cols=33 Identities=12% Similarity=0.306 Sum_probs=20.5
Q ss_pred ceEEEe-ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFS-KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~-~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|. .+|||+|..... ..+.+.+++.++.++
T Consensus 36 vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv 71 (198)
T 1zof_A 36 VILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVI 71 (198)
T ss_dssp EEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEE
T ss_pred EEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEE
Confidence 345577 899999997642 123344555567664
No 402
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=78.06 E-value=0.86 Score=30.05 Aligned_cols=17 Identities=35% Similarity=0.929 Sum_probs=13.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 31 vll~f~~~~C~~C~~~~ 47 (154)
T 3kcm_A 31 VIVNFWATWCPPCREEI 47 (154)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 34557889999999864
No 403
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=78.05 E-value=0.69 Score=31.00 Aligned_cols=17 Identities=35% Similarity=0.776 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 35 vvv~F~a~wC~~C~~~~ 51 (153)
T 2wz9_A 35 LVVHFWAPWAPQCAQMN 51 (153)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHhHHHHH
Confidence 46668999999999865
No 404
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=77.99 E-value=0.93 Score=31.17 Aligned_cols=29 Identities=7% Similarity=0.287 Sum_probs=19.2
Q ss_pred EeccCCcccccc-cc--hhhHHHHhhcCce-EE
Q psy7674 58 FSKSWCPFCTKA-KE--NNYEKELEKNKID-YF 86 (164)
Q Consensus 58 ~~~~~cp~~~~~-~~--~~~~~~l~~~gv~-~~ 86 (164)
|-.+|||+|..+ .. ....+.+++.|+. ++
T Consensus 51 ~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv 83 (171)
T 2pwj_A 51 LPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVI 83 (171)
T ss_dssp CSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEE
T ss_pred ecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
Confidence 567999999986 32 1233456667888 64
No 405
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.99 E-value=1 Score=31.05 Aligned_cols=20 Identities=20% Similarity=0.189 Sum_probs=17.5
Q ss_pred CCcEEEECCcHHHHHhhccc
Q psy7674 144 PGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 144 ~~~vvViGgG~~g~E~A~~l 163 (164)
.++++|+|.|.+|..+|..|
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L 58 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDEL 58 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHH
Confidence 46899999999999998765
No 406
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=77.75 E-value=0.72 Score=30.10 Aligned_cols=17 Identities=24% Similarity=0.534 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 49 vvv~f~a~wC~~C~~~~ 65 (139)
T 3d22_A 49 VLANFSARWCGPSRQIA 65 (139)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 45668889999999865
No 407
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=77.54 E-value=6 Score=32.60 Aligned_cols=49 Identities=20% Similarity=0.151 Sum_probs=32.0
Q ss_pred hhHHHHhhcCceEEee-EEEEe--eC-cE---EEe---CCeeEEEEeceEEEecCCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFV--DK-HR---VKF---AGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~--~~-~~---v~v---~~~~~~~~~d~liiAtGs~~~ 121 (164)
.+.+.+++.|++++.+ .++.+ +. .. +.+ ++....+.+|.+|+|||+.+.
T Consensus 260 ~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 260 VLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 3456677789999987 44444 22 22 333 343346889999999998764
No 408
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=77.32 E-value=0.81 Score=30.57 Aligned_cols=17 Identities=41% Similarity=1.091 Sum_probs=12.9
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 44 vll~F~~~~C~~C~~~~ 60 (158)
T 3hdc_A 44 VLVNFWASWCPYCRDEM 60 (158)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCcCHHHHHHH
Confidence 34558899999998754
No 409
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=77.31 E-value=2.8 Score=33.15 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=28.3
Q ss_pred cCceEEeeE-EEEee--CcE--EEe----CCeeEEEEeceEEEecCCCCC
Q psy7674 81 NKIDYFNAK-AVFVD--KHR--VKF----AGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 81 ~gv~~~~~~-~~~~~--~~~--v~v----~~~~~~~~~d~liiAtGs~~~ 121 (164)
.+++++.+. ++.+. ... +.+ +++...+.+|.+|+|||.+|+
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCC
Confidence 589998874 44442 232 333 343346999999999999988
No 410
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=77.24 E-value=1.2 Score=30.47 Aligned_cols=31 Identities=19% Similarity=0.528 Sum_probs=19.3
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... .+.++.++ ++.++
T Consensus 61 vll~F~a~~C~~C~~~~~-~l~~l~~~-~v~vv 91 (176)
T 3kh7_A 61 ALVNVWGTWCPSCRVEHP-ELTRLAEQ-GVVIY 91 (176)
T ss_dssp EEEEEECTTCHHHHHHHH-HHHHHHHT-TCEEE
T ss_pred EEEEEECCcCHHHHHHHH-HHHHHHHC-CCEEE
Confidence 455588999999987642 23333333 66664
No 411
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=77.15 E-value=4 Score=33.18 Aligned_cols=47 Identities=21% Similarity=0.188 Sum_probs=32.9
Q ss_pred hHHHHhhcCceEEeeEEEEee--C-c---EEEe-CCeeEEEEeceEEEecCCCCCC
Q psy7674 74 YEKELEKNKIDYFNAKAVFVD--K-H---RVKF-AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~--~-~---~v~v-~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+.+.+++.|++++.++++.+. . . .+.. ++ ..+.+|.+|.|+|.....
T Consensus 171 L~~~a~~~gv~~~~~~v~~i~~~~~g~~~~v~~~~g--~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 171 LKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEG--RTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHTTCEEEECCEEEEEECTTSCEEEEEETTS--CEECCSEEEECCGGGCCC
T ss_pred HHHHHHHCCCEEEEeeEeEEEEcCCCcEEEEEECCC--cEEEeCEEEECCCCchhh
Confidence 455566789999988766653 1 1 2333 44 579999999999987655
No 412
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=76.79 E-value=0.97 Score=38.10 Aligned_cols=20 Identities=30% Similarity=0.454 Sum_probs=17.8
Q ss_pred CCcEEEECCcHHHHHhhccc
Q psy7674 144 PGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 144 ~~~vvViGgG~~g~E~A~~l 163 (164)
.++|+|||+|..|+.+|..|
T Consensus 107 ~~~v~viG~G~~gl~~a~~l 126 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQL 126 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHH
Confidence 47899999999999999765
No 413
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=76.73 E-value=0.8 Score=29.44 Aligned_cols=17 Identities=18% Similarity=0.417 Sum_probs=14.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+||++|+...
T Consensus 36 vlv~F~a~wC~~C~~~~ 52 (127)
T 3h79_A 36 VFVLYYVPWSRHSVAAM 52 (127)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCccHHHHHHh
Confidence 45668999999999875
No 414
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=76.59 E-value=2.7 Score=31.96 Aligned_cols=45 Identities=13% Similarity=0.167 Sum_probs=30.6
Q ss_pred hhHHHHhhcCceEEee-EEEEe--eCcEEEe--CCeeEEEEeceEEEecCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFV--DKHRVKF--AGEERTVSAQNFIIAVGGR 119 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~--~~~~v~v--~~~~~~~~~d~liiAtGs~ 119 (164)
.+.+.+++.|++++.+ .++.+ +...+.+ ++ ..+.+|++|+|||+.
T Consensus 159 ~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~--g~i~a~~VV~A~G~~ 208 (381)
T 3nyc_A 159 GYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDA--GSYRAAVLVNAAGAW 208 (381)
T ss_dssp HHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSS--EEEEESEEEECCGGG
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCC--CEEEcCEEEECCChh
Confidence 3456677889999876 44444 2333444 33 379999999999974
No 415
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=76.50 E-value=1.2 Score=29.35 Aligned_cols=32 Identities=22% Similarity=0.695 Sum_probs=19.5
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... .+.++.+++++.++
T Consensus 33 vll~f~~~~C~~C~~~~~-~l~~l~~~~~v~~v 64 (154)
T 3ia1_A 33 AVIVFWASWCTVCKAEFP-GLHRVAEETGVPFY 64 (154)
T ss_dssp EEEEEECTTCHHHHHHHH-HHHHHHHHHCCCEE
T ss_pred EEEEEEcccChhHHHHHH-HHHHHHHHcCCeEE
Confidence 355588999999997642 22333333366653
No 416
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=76.39 E-value=1.5 Score=30.46 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=20.2
Q ss_pred ceEEEe-ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFS-KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~-~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|. .+|||+|..... ..+.+.+++.++.++
T Consensus 48 vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv 83 (195)
T 2bmx_A 48 RVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQIL 83 (195)
T ss_dssp EEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEE
T ss_pred EEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEE
Confidence 345577 899999987542 123344455567664
No 417
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=76.38 E-value=0.81 Score=31.00 Aligned_cols=19 Identities=37% Similarity=0.873 Sum_probs=15.7
Q ss_pred CCceEEEeccCCccccccc
Q psy7674 52 NNSVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 52 ~d~vvv~~~~~cp~~~~~~ 70 (164)
.-.+++|+..+||||.+..
T Consensus 15 ~~~vv~f~D~~Cp~C~~~~ 33 (147)
T 3gv1_A 15 KLKVAVFSDPDCPFCKRLE 33 (147)
T ss_dssp CEEEEEEECTTCHHHHHHH
T ss_pred CEEEEEEECCCChhHHHHH
Confidence 3457889999999999876
No 418
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=76.12 E-value=2.1 Score=30.46 Aligned_cols=31 Identities=10% Similarity=0.044 Sum_probs=18.9
Q ss_pred ceEEEeccCCcccccccchhhH---HHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYE---KELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~---~~l~~~gv~~~ 86 (164)
.++.|..+|||+| .. .-.+. +.++..|+.++
T Consensus 41 vll~F~At~C~~c-~e-~p~L~~l~~~~~~~g~~vl 74 (207)
T 2r37_A 41 VLFVNVASYGGLT-GQ-YIELNALQEELAPFGLVIL 74 (207)
T ss_dssp EEEEEECSSSTTT-TH-HHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEeCCCCCCh-HH-HHHHHHHHHHhccCCEEEE
Confidence 3444889999999 43 22333 33455577664
No 419
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=76.08 E-value=3.5 Score=31.77 Aligned_cols=44 Identities=11% Similarity=-0.007 Sum_probs=30.6
Q ss_pred hHHHHhhcCceEEee-EEEEee--CcEEEe--CCeeEEEEeceEEEecCCC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVD--KHRVKF--AGEERTVSAQNFIIAVGGR 119 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~--~~~v~v--~~~~~~~~~d~liiAtGs~ 119 (164)
+.+.+++.|++++.+ +++.+. ...+.+ ++ ..+.+|++|+|+|+.
T Consensus 159 l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~--g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 159 LFTLAQAAGATLRAGETVTELVPDADGVSVTTDR--GTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEEETTEEEEEESS--CEEEEEEEEECCGGG
T ss_pred HHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECC--CEEEcCEEEEcCCcC
Confidence 445667789999887 455553 333444 33 368999999999975
No 420
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=76.04 E-value=0.85 Score=29.99 Aligned_cols=17 Identities=35% Similarity=0.905 Sum_probs=14.2
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+||++|....
T Consensus 27 vlv~F~a~wC~~C~~~~ 43 (140)
T 3hz4_A 27 VVVMFYSPACPYCKAME 43 (140)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCChhHHHHH
Confidence 46779999999999865
No 421
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=76.00 E-value=1.3 Score=29.63 Aligned_cols=32 Identities=22% Similarity=0.208 Sum_probs=20.1
Q ss_pred eEEEec-cCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 55 VVIFSK-SWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 55 vvv~~~-~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
++.|-. +|||.|..... ..+.+.+++.|+.++
T Consensus 39 vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv 73 (163)
T 3gkn_A 39 VIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKIL 73 (163)
T ss_dssp EEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEE
Confidence 444555 99999997642 233345566677764
No 422
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=75.79 E-value=1.4 Score=30.01 Aligned_cols=27 Identities=26% Similarity=0.470 Sum_probs=16.6
Q ss_pred ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 60 KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 60 ~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.+|||+|..... ....+.+++.|+.++
T Consensus 43 ~~~cp~C~~e~~~l~~~~~~~~~~~v~vv 71 (164)
T 4gqc_A 43 AAFSPVCTKELCTFRDKMAQLEKANAEVL 71 (164)
T ss_dssp CTTCCEECSSCEESCCCGGGGGGSSSEEE
T ss_pred CCCCCCcccchhhhhhhHHHhhccCceEE
Confidence 799999987631 122234556666654
No 423
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=75.73 E-value=6.1 Score=32.42 Aligned_cols=48 Identities=23% Similarity=0.177 Sum_probs=31.6
Q ss_pred hhHHHHhhcCceEEee-EEEEe--eC-cE---EEe---CCeeEEEEeceEEEecCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFV--DK-HR---VKF---AGEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~--~~-~~---v~v---~~~~~~~~~d~liiAtGs~~ 120 (164)
.+.+.+++.|++++.+ +++.+ +. .. +.+ ++....+.+|.+|+|||+..
T Consensus 260 ~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 260 VLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 3456667789999987 45444 23 22 333 34323689999999999854
No 424
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=77.40 E-value=0.57 Score=31.29 Aligned_cols=17 Identities=35% Similarity=0.942 Sum_probs=13.4
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 36 vll~f~a~~C~~C~~~~ 52 (159)
T 2ls5_A 36 VMLQFTASWCGVCRKEM 52 (159)
Confidence 45557889999998765
No 425
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=75.28 E-value=6 Score=31.98 Aligned_cols=51 Identities=22% Similarity=0.261 Sum_probs=33.9
Q ss_pred hhHHHHhhcCceEEee-EEEEee--CcE---EEe---CCeeEEEEeceEEEecCCCCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVD--KHR---VKF---AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~--~~~---v~v---~~~~~~~~~d~liiAtGs~~~~p 123 (164)
.+.+.+++.|++++.+ +++.+. ... +.+ +++...+.+|.+|.|+|....+.
T Consensus 116 ~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr 175 (512)
T 3e1t_A 116 MLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVS 175 (512)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSG
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHH
Confidence 3455666789999987 455542 332 333 34324799999999999876543
No 426
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=75.19 E-value=0.92 Score=36.84 Aligned_cols=18 Identities=11% Similarity=0.132 Sum_probs=16.1
Q ss_pred cEEEECCcHHHHHhhccc
Q psy7674 146 KVLLVGASYIALECAGCD 163 (164)
Q Consensus 146 ~vvViGgG~~g~E~A~~l 163 (164)
.|+|||+|..|+-+|..|
T Consensus 43 DVvVVGaG~AGl~AA~~a 60 (510)
T 4at0_A 43 DVVVAGYGIAGVAASIEA 60 (510)
T ss_dssp EEEEECCSHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHH
Confidence 699999999999998765
No 427
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=75.08 E-value=7.3 Score=28.78 Aligned_cols=48 Identities=19% Similarity=0.194 Sum_probs=30.1
Q ss_pred HHHhh-cCceEEee-EEEEee--CcEE---EeC-------------CeeEEEEeceEEEecCCCCCCC
Q psy7674 76 KELEK-NKIDYFNA-KAVFVD--KHRV---KFA-------------GEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 76 ~~l~~-~gv~~~~~-~~~~~~--~~~v---~v~-------------~~~~~~~~d~liiAtGs~~~~p 123 (164)
+.+.+ .|++++.+ +++.+. ...+ .+. ++...+.+|.+|+|||..+.+.
T Consensus 127 ~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~ 194 (284)
T 1rp0_A 127 SKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFG 194 (284)
T ss_dssp HHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTT
T ss_pred HHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHH
Confidence 34444 69999887 455553 3322 221 1125789999999999877643
No 428
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=75.05 E-value=1.9 Score=30.82 Aligned_cols=33 Identities=12% Similarity=0.211 Sum_probs=20.7
Q ss_pred ceEEEe-ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFS-KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~-~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|- .+|||+|..... ..+.+.+++.++.++
T Consensus 59 vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv 94 (220)
T 1zye_A 59 LVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVV 94 (220)
T ss_dssp EEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 344477 899999997642 223344555677764
No 429
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=74.80 E-value=0.79 Score=30.82 Aligned_cols=17 Identities=29% Similarity=0.952 Sum_probs=13.4
Q ss_pred ceEEEe-ccCCccccccc
Q psy7674 54 SVVIFS-KSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~-~~~cp~~~~~~ 70 (164)
.++.|. .+|||+|+...
T Consensus 50 vlv~F~ga~wC~~C~~~~ 67 (154)
T 2ju5_A 50 IGLFFTGSDWCMWCIKMQ 67 (154)
T ss_dssp EEEEEECTTTCHHHHHHH
T ss_pred EEEEEeCCCCCHhHHHHH
Confidence 355577 89999999865
No 430
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=74.78 E-value=1.2 Score=38.98 Aligned_cols=20 Identities=30% Similarity=0.454 Sum_probs=17.8
Q ss_pred CCcEEEECCcHHHHHhhccc
Q psy7674 144 PGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 144 ~~~vvViGgG~~g~E~A~~l 163 (164)
.++|+|||+|..|+.+|..|
T Consensus 278 ~~~v~viG~G~aGl~~A~~l 297 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQL 297 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHH
Confidence 46899999999999999876
No 431
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=74.78 E-value=0.87 Score=28.73 Aligned_cols=16 Identities=31% Similarity=0.796 Sum_probs=12.7
Q ss_pred eEEEeccCCccccccc
Q psy7674 55 VVIFSKSWCPFCTKAK 70 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~ 70 (164)
++.|.++||+.|....
T Consensus 24 vv~F~a~wC~~C~~~~ 39 (105)
T 3zzx_A 24 VIDFYATWCGPCKMIA 39 (105)
T ss_dssp EEEEECTTCHHHHHHH
T ss_pred EEEEECCCCCCccCCC
Confidence 3448999999998755
No 432
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=74.78 E-value=4.2 Score=32.18 Aligned_cols=68 Identities=16% Similarity=0.197 Sum_probs=41.3
Q ss_pred CCceEEEeccCC--cc-cccccchhhHHHHhhcCceEEee-EEEEeeCc----EEEeCCeeEEEEeceEEEecCCCCCC
Q psy7674 52 NNSVVIFSKSWC--PF-CTKAKENNYEKELEKNKIDYFNA-KAVFVDKH----RVKFAGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 52 ~d~vvv~~~~~c--p~-~~~~~~~~~~~~l~~~gv~~~~~-~~~~~~~~----~v~v~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+..++++.+... +. ........+.+.+++. |+++.+ .+..++.. .+..++ ..+.+|.+++|||.+|+.
T Consensus 171 g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g--~~i~~D~Vv~a~G~~p~~ 246 (449)
T 3kd9_A 171 GKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEERVEKVVTDA--GEYKAELVILATGIKPNI 246 (449)
T ss_dssp TCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSSSCCEEEETT--EEEECSEEEECSCEEECC
T ss_pred CCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCC--CEEECCEEEEeeCCccCH
Confidence 455666665432 21 2222233455677777 999877 45555422 122255 679999999999988864
No 433
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=74.75 E-value=0.97 Score=28.80 Aligned_cols=18 Identities=33% Similarity=0.896 Sum_probs=14.0
Q ss_pred CceEEEeccCCccccccc
Q psy7674 53 NSVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~ 70 (164)
..++.|..+|||+|....
T Consensus 27 ~~ll~f~~~~C~~C~~~~ 44 (136)
T 1zzo_A 27 PAVLWFWAPWCPTCQGEA 44 (136)
T ss_dssp CEEEEEECTTCHHHHHHH
T ss_pred eEEEEEEcCCChhHHHHH
Confidence 345668899999999765
No 434
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=74.67 E-value=1.4 Score=30.23 Aligned_cols=28 Identities=7% Similarity=0.026 Sum_probs=18.3
Q ss_pred eccCCccccc-ccc--hhhHHHHhhcCc-eEE
Q psy7674 59 SKSWCPFCTK-AKE--NNYEKELEKNKI-DYF 86 (164)
Q Consensus 59 ~~~~cp~~~~-~~~--~~~~~~l~~~gv-~~~ 86 (164)
-.+|||.|.. ... ..+.+.+++.|+ .++
T Consensus 40 ~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv 71 (167)
T 2wfc_A 40 PGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIA 71 (167)
T ss_dssp SCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
Confidence 4799999998 432 123345666788 764
No 435
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=74.61 E-value=1.9 Score=31.04 Aligned_cols=32 Identities=16% Similarity=0.383 Sum_probs=19.9
Q ss_pred eEEEe-ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 55 VVIFS-KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 55 vvv~~-~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
++.|- .+|||.|..... ..+.+.+++.++.++
T Consensus 60 vl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv 94 (221)
T 2c0d_A 60 CLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELL 94 (221)
T ss_dssp EEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEE
T ss_pred EEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEE
Confidence 44466 899999997642 123344555677764
No 436
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=74.50 E-value=4.5 Score=33.09 Aligned_cols=48 Identities=17% Similarity=0.181 Sum_probs=33.3
Q ss_pred hhHHHHhhc-CceEEeeEEEEee--C-c---EEEe-CCeeEEEEeceEEEecCCCCCC
Q psy7674 73 NYEKELEKN-KIDYFNAKAVFVD--K-H---RVKF-AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 73 ~~~~~l~~~-gv~~~~~~~~~~~--~-~---~v~v-~~~~~~~~~d~liiAtGs~~~~ 122 (164)
.+.+.+++. |++++.++++.+. . . .+.+ ++ ..+.+|.+|.|+|..+..
T Consensus 199 ~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~~v~~~~G--~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 199 FLRRFATEKLGVRHVEDRVEHVQRDANGNIESVRTATG--RVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHSCCEEEECCEEEEEECTTSCEEEEEETTS--CEEECSEEEECCGGGCCC
T ss_pred HHHHHHHhcCCcEEEECeEeEEEEcCCCCEEEEEECCC--CEEECCEEEECCCCchhh
Confidence 345666677 9999988766653 2 1 2333 44 579999999999986654
No 437
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=74.37 E-value=1.6 Score=35.17 Aligned_cols=21 Identities=19% Similarity=0.211 Sum_probs=18.5
Q ss_pred CCCcEEEECCcHHHHHhhccc
Q psy7674 143 DPGKVLLVGASYIALECAGCD 163 (164)
Q Consensus 143 ~~~~vvViGgG~~g~E~A~~l 163 (164)
..++++|+|||.+|..+|..|
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L 254 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRL 254 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHH
T ss_pred cccEEEEEcchHHHHHHHHHh
Confidence 458999999999999999765
No 438
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=74.31 E-value=0.98 Score=30.30 Aligned_cols=16 Identities=25% Similarity=0.513 Sum_probs=13.5
Q ss_pred eEEEeccCCccccccc
Q psy7674 55 VVIFSKSWCPFCTKAK 70 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~ 70 (164)
++.|.++||+.|+...
T Consensus 27 lv~F~a~WC~~C~~~~ 42 (149)
T 3gix_A 27 VLRFGRDEDPVCLQLD 42 (149)
T ss_dssp EEEEECTTSHHHHHHH
T ss_pred EEEEECCCCHHHHHHH
Confidence 5569999999999865
No 439
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=74.28 E-value=1 Score=37.26 Aligned_cols=19 Identities=21% Similarity=0.312 Sum_probs=16.9
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
.+|+|||+|..|+.+|..|
T Consensus 127 ~~v~viG~G~aG~~aa~~~ 145 (572)
T 1d4d_A 127 TDVVIIGSGGAGLAAAVSA 145 (572)
T ss_dssp CSEEEECCSHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHH
Confidence 5799999999999999765
No 440
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=74.15 E-value=3.7 Score=31.14 Aligned_cols=48 Identities=17% Similarity=0.270 Sum_probs=31.3
Q ss_pred hHHHHhhcC-ceEEee-EEEEe--eCcE--EEe-CCeeEEE-EeceEEEecCCCCCCC
Q psy7674 74 YEKELEKNK-IDYFNA-KAVFV--DKHR--VKF-AGEERTV-SAQNFIIAVGGRPTYP 123 (164)
Q Consensus 74 ~~~~l~~~g-v~~~~~-~~~~~--~~~~--v~v-~~~~~~~-~~d~liiAtGs~~~~p 123 (164)
+.+.+++.| |+++.+ .+..+ +... +.+ ++ +.+ .+|.+++|||.+|...
T Consensus 220 l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~~d~vi~a~G~~~~~~ 275 (369)
T 3d1c_A 220 LGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSG--QSVHTPHEPILATGFDATKN 275 (369)
T ss_dssp HHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSS--CCEEESSCCEECCCBCGGGS
T ss_pred HHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCC--eEeccCCceEEeeccCCccc
Confidence 345566675 999877 45555 3333 444 45 334 4599999999988763
No 441
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=74.08 E-value=1 Score=28.77 Aligned_cols=18 Identities=39% Similarity=1.097 Sum_probs=14.0
Q ss_pred CceEEEeccCCccccccc
Q psy7674 53 NSVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~ 70 (164)
..++.|..+|||+|....
T Consensus 26 ~~lv~f~~~~C~~C~~~~ 43 (136)
T 1lu4_A 26 PAVLWFWTPWCPFCNAEA 43 (136)
T ss_dssp CEEEEEECTTCHHHHHHH
T ss_pred EEEEEEECCcChhHHHHH
Confidence 345668899999999865
No 442
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=74.02 E-value=5.3 Score=32.09 Aligned_cols=47 Identities=13% Similarity=0.044 Sum_probs=32.2
Q ss_pred hHHHHhhcCceEEeeEEEEee--C-c---EEEe-CCeeEEEEeceEEEecCCCCCC
Q psy7674 74 YEKELEKNKIDYFNAKAVFVD--K-H---RVKF-AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~~~~~~~--~-~---~v~v-~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+.+.+.+.|++++.++++.+. . . .+.. ++ +.+.+|.+|.|+|.....
T Consensus 179 L~~~a~~~gv~~~~~~v~~i~~~~~~~~~~v~~~~g--~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 179 LSEYAIARGVRHVVDDVQHVGQDERGWISGVHTKQH--GEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHTTCEEEECCEEEEEECTTSCEEEEEESSS--CEEECSEEEECCGGGCCC
T ss_pred HHHHHHHCCCEEEECeEeEEEEcCCCCEEEEEECCC--CEEEcCEEEECCCcchHH
Confidence 445566789999888666553 2 1 1333 34 579999999999986554
No 443
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=73.86 E-value=5.8 Score=32.16 Aligned_cols=47 Identities=11% Similarity=0.130 Sum_probs=32.5
Q ss_pred hHHHHhh-cCceEEeeEEEEee---C-c--EEEe-CCeeEEEEeceEEEecCCCCCC
Q psy7674 74 YEKELEK-NKIDYFNAKAVFVD---K-H--RVKF-AGEERTVSAQNFIIAVGGRPTY 122 (164)
Q Consensus 74 ~~~~l~~-~gv~~~~~~~~~~~---~-~--~v~v-~~~~~~~~~d~liiAtGs~~~~ 122 (164)
+.+.+++ .|++++.++++.+. . . .+.. ++ ..+.+|.+|.|+|.+..+
T Consensus 181 L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g--~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 181 LTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQN--GEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSS--CEEECSEEEECSGGGCCC
T ss_pred HHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCC--CEEEcCEEEECCCcchHH
Confidence 4455666 79999988766653 1 2 2333 43 459999999999987654
No 444
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=73.76 E-value=1 Score=29.92 Aligned_cols=16 Identities=38% Similarity=0.893 Sum_probs=13.5
Q ss_pred eEEEeccCCccccccc
Q psy7674 55 VVIFSKSWCPFCTKAK 70 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~ 70 (164)
++.|..+||++|+...
T Consensus 27 lv~F~a~wC~~C~~~~ 42 (142)
T 1qgv_A 27 VIRFGHDWDPTCMKMD 42 (142)
T ss_dssp EEEEECTTSHHHHHHH
T ss_pred EEEEECCCCHHHHHHH
Confidence 5668999999999865
No 445
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=73.69 E-value=2.4 Score=29.37 Aligned_cols=33 Identities=6% Similarity=0.241 Sum_probs=20.8
Q ss_pred ceEEEe-ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFS-KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~-~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|- .+|||+|..... ..+.+.+++.++.++
T Consensus 34 vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv 69 (192)
T 2h01_A 34 VLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELL 69 (192)
T ss_dssp EEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEE
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 344577 899999997542 123344555677764
No 446
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=73.69 E-value=1.4 Score=29.48 Aligned_cols=31 Identities=26% Similarity=0.626 Sum_probs=19.0
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhc-CceE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKN-KIDY 85 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~-gv~~ 85 (164)
.++.|..+|||+|..... .+.++.+++ ++.+
T Consensus 40 ~lv~F~~~~C~~C~~~~~-~l~~l~~~~~~v~v 71 (165)
T 3ha9_A 40 VILWFMAAWCPSCVYMAD-LLDRLTEKYREISV 71 (165)
T ss_dssp EEEEEECTTCTTHHHHHH-HHHHHHHHCTTEEE
T ss_pred EEEEEECCCCcchhhhHH-HHHHHHHHcCCcEE
Confidence 345588999999997652 233344444 4554
No 447
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=73.18 E-value=1.9 Score=31.85 Aligned_cols=17 Identities=12% Similarity=0.256 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|+...
T Consensus 29 v~v~f~a~wC~~C~~~~ 45 (287)
T 3qou_A 29 VLFYFWSERSQHCLQLT 45 (287)
T ss_dssp EEEEEECTTCTTTTTTH
T ss_pred EEEEEECCCChHHHHHH
Confidence 35669999999999875
No 448
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=73.04 E-value=6 Score=30.62 Aligned_cols=49 Identities=16% Similarity=0.161 Sum_probs=32.1
Q ss_pred hhHHHHhhcCceEEee-EEEEee--Cc--EEEe---CCeeEEEEeceEEEecCCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVD--KH--RVKF---AGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~--~~--~v~v---~~~~~~~~~d~liiAtGs~~~ 121 (164)
.+.+.+++.|++++.+ +++.++ .. .+.+ +++...+.+|.+|.|+|..+.
T Consensus 111 ~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~ 167 (421)
T 3nix_A 111 TLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRV 167 (421)
T ss_dssp HHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCH
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchh
Confidence 3455666779999988 455543 22 2333 442236999999999997753
No 449
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=73.02 E-value=1.4 Score=30.83 Aligned_cols=29 Identities=10% Similarity=0.203 Sum_probs=18.8
Q ss_pred EeccCCccccc-ccc--hhhHHHHhhcCce-EE
Q psy7674 58 FSKSWCPFCTK-AKE--NNYEKELEKNKID-YF 86 (164)
Q Consensus 58 ~~~~~cp~~~~-~~~--~~~~~~l~~~gv~-~~ 86 (164)
|-.+|||+|.. ... ..+.+.+++.|+. ++
T Consensus 64 ~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv 96 (184)
T 3uma_A 64 VPGAFTPTCSLNHLPGYLENRDAILARGVDDIA 96 (184)
T ss_dssp ESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEE
T ss_pred EcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEE
Confidence 44799999998 331 2333456677887 53
No 450
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=72.99 E-value=3.3 Score=27.74 Aligned_cols=33 Identities=15% Similarity=0.359 Sum_probs=21.1
Q ss_pred ceEEEeccCCc-ccccccc--hhhHHHHhhcC--ceEE
Q psy7674 54 SVVIFSKSWCP-FCTKAKE--NNYEKELEKNK--IDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp-~~~~~~~--~~~~~~l~~~g--v~~~ 86 (164)
.++.|-.+||| .|..... ..+.+.+++.+ +.++
T Consensus 36 vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv 73 (174)
T 1xzo_A 36 WLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRII 73 (174)
T ss_dssp EEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEE
Confidence 45558899999 9987542 23344555554 6664
No 451
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=72.96 E-value=1.4 Score=30.17 Aligned_cols=17 Identities=29% Similarity=0.653 Sum_probs=13.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 63 vll~F~a~~C~~C~~~~ 79 (186)
T 1jfu_A 63 LLVNLWATWCVPCRKEM 79 (186)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEEeCCCHhHHHHH
Confidence 34557889999998764
No 452
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=72.81 E-value=1.5 Score=30.46 Aligned_cols=27 Identities=15% Similarity=0.222 Sum_probs=16.5
Q ss_pred ccCCcccccccch--hhHHHHhhcCceEE
Q psy7674 60 KSWCPFCTKAKEN--NYEKELEKNKIDYF 86 (164)
Q Consensus 60 ~~~cp~~~~~~~~--~~~~~l~~~gv~~~ 86 (164)
.+|||.|...... .+.+.+++.++.++
T Consensus 40 ~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv 68 (186)
T 1n8j_A 40 ADFTFVSPTELGDVADHYEELQKLGVDVY 68 (186)
T ss_dssp CTTCSHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred CCCCCccHHHHHHHHHHHHHHHHCCCEEE
Confidence 5899999976421 23334455677664
No 453
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=72.60 E-value=1.2 Score=28.55 Aligned_cols=17 Identities=41% Similarity=1.032 Sum_probs=13.7
Q ss_pred ceEEEecc-------CCccccccc
Q psy7674 54 SVVIFSKS-------WCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~-------~cp~~~~~~ 70 (164)
.++.|..+ |||+|+...
T Consensus 27 v~v~F~a~~~~~~~~wC~~C~~~~ 50 (123)
T 1wou_A 27 IFAYFTGSKDAGGKSWCPDCVQAE 50 (123)
T ss_dssp EEEEEECCBCTTCCBSCHHHHHHH
T ss_pred EEEEEEccCCCCCCCcCHHHHHhh
Confidence 35668888 999999876
No 454
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=72.41 E-value=1.8 Score=30.15 Aligned_cols=33 Identities=12% Similarity=0.151 Sum_probs=21.0
Q ss_pred ceEEEe-ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFS-KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~-~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|- .+|||.|..... ..+.+.+++.++.++
T Consensus 37 vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv 72 (197)
T 1qmv_A 37 VVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVL 72 (197)
T ss_dssp EEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEE
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 455577 899999998642 223344555577764
No 455
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=72.41 E-value=1.2 Score=38.40 Aligned_cols=19 Identities=26% Similarity=0.293 Sum_probs=17.1
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
.+|+|||||.+|+-+|..|
T Consensus 337 ~~v~viG~G~~Gl~aA~~l 355 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQL 355 (776)
T ss_dssp CEEEEECCSHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHH
Confidence 5899999999999998765
No 456
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=72.34 E-value=1.2 Score=28.98 Aligned_cols=17 Identities=41% Similarity=0.954 Sum_probs=13.3
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|+...
T Consensus 31 vll~F~a~wC~~C~~~~ 47 (144)
T 1o73_A 31 VFLYFSASWCPPCRGFT 47 (144)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECcCCHHHHHHH
Confidence 45558899999998764
No 457
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=72.34 E-value=1.2 Score=29.08 Aligned_cols=17 Identities=35% Similarity=0.712 Sum_probs=13.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 31 vll~F~a~wC~~C~~~~ 47 (144)
T 1i5g_A 31 VFFYFSASWCPPSRAFT 47 (144)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 34558889999998765
No 458
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=72.32 E-value=1.9 Score=30.26 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=20.8
Q ss_pred ceEEEe-ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFS-KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~-~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|- .+|||+|..... ..+.+.+++.++.++
T Consensus 39 vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi 74 (202)
T 1uul_A 39 LVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVL 74 (202)
T ss_dssp EEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEE
T ss_pred EEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEE
Confidence 344577 899999997642 223344555677764
No 459
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=74.78 E-value=0.76 Score=29.84 Aligned_cols=17 Identities=35% Similarity=0.792 Sum_probs=13.5
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 29 vll~F~a~wC~~C~~~~ 45 (143)
T 2lus_A 29 IGFYFSAHWCPPCRGFT 45 (143)
Confidence 45668889999998765
No 460
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=72.23 E-value=1.1 Score=29.35 Aligned_cols=16 Identities=25% Similarity=0.513 Sum_probs=13.5
Q ss_pred eEEEeccCCccccccc
Q psy7674 55 VVIFSKSWCPFCTKAK 70 (164)
Q Consensus 55 vvv~~~~~cp~~~~~~ 70 (164)
++.|..+||++|....
T Consensus 34 vv~f~a~wC~~C~~~~ 49 (135)
T 2dbc_A 34 VIHLYRSSVPMCLVVN 49 (135)
T ss_dssp EEEECCTTCHHHHHHH
T ss_pred EEEEECCCChHHHHHH
Confidence 5668899999999876
No 461
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=72.23 E-value=1.2 Score=28.85 Aligned_cols=17 Identities=24% Similarity=0.571 Sum_probs=13.4
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 32 ~lv~f~~~~C~~C~~~~ 48 (148)
T 2b5x_A 32 TLIHFWSISCHLCKEAM 48 (148)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEEcCCCHHHHHHh
Confidence 45668889999998754
No 462
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=72.12 E-value=1.2 Score=29.29 Aligned_cols=18 Identities=33% Similarity=0.600 Sum_probs=13.9
Q ss_pred CceEEEeccCCccccccc
Q psy7674 53 NSVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~ 70 (164)
..++.|..+|||+|....
T Consensus 44 ~~ll~f~~~~C~~C~~~~ 61 (156)
T 1kng_A 44 VSLVNVWASWCVPCHDEA 61 (156)
T ss_dssp CEEEEEECTTCHHHHHHH
T ss_pred EEEEEEEcccCHhHHHHH
Confidence 345668899999998754
No 463
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=72.10 E-value=1.5 Score=35.57 Aligned_cols=18 Identities=28% Similarity=0.139 Sum_probs=15.9
Q ss_pred cEEEECCcHHHHHhhccc
Q psy7674 146 KVLLVGASYIALECAGCD 163 (164)
Q Consensus 146 ~vvViGgG~~g~E~A~~l 163 (164)
.|+|||+|+.|+-+|..|
T Consensus 41 Dvi~IGaGp~gLa~A~~L 58 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIAL 58 (501)
T ss_dssp EEEEECCSHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHH
Confidence 599999999999998765
No 464
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=72.10 E-value=10 Score=28.89 Aligned_cols=48 Identities=23% Similarity=0.156 Sum_probs=32.3
Q ss_pred hhHHHHhhcCceEEee-EEEEe--eCcE---EEe--CCeeEEEEeceEEEecCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFV--DKHR---VKF--AGEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~--~~~~---v~v--~~~~~~~~~d~liiAtGs~~ 120 (164)
.+.+.+++.|++++.+ +++.+ +... +.+ .++...+.+|.+|.|+|...
T Consensus 107 ~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 107 HLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 3455666789999877 45554 2333 333 23446899999999999875
No 465
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=72.03 E-value=5.3 Score=30.46 Aligned_cols=45 Identities=4% Similarity=0.003 Sum_probs=31.1
Q ss_pred hHHHHhhcCceEEee-EEEEee--CcEE---EeCCeeEEEEeceEEEecCCCC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVD--KHRV---KFAGEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~--~~~v---~v~~~~~~~~~d~liiAtGs~~ 120 (164)
+.+.+++.|++++.+ +++.+. ...+ ..++ ..+.+|.+|+|||+..
T Consensus 155 l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~--g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 155 FAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNK--GIIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETT--EEEECSEEEECCGGGH
T ss_pred HHHHHHHCCCEEECCceEEEEEEECCEEEEEEECC--cEEECCEEEECcchhH
Confidence 456677889999887 565553 2333 3333 3699999999999754
No 466
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=72.00 E-value=1.2 Score=29.15 Aligned_cols=17 Identities=35% Similarity=0.706 Sum_probs=13.2
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 31 vll~F~a~wC~~C~~~~ 47 (146)
T 1o8x_A 31 VFFYFSASWCPPARGFT 47 (146)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEEccCCHHHHHHH
Confidence 35558889999998764
No 467
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=71.63 E-value=4 Score=31.02 Aligned_cols=46 Identities=11% Similarity=0.096 Sum_probs=30.7
Q ss_pred hhHHHHhhcCceEEee-EEEEee--CcEEEe--CCeeEEEEeceEEEecCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVD--KHRVKF--AGEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~--~~~v~v--~~~~~~~~~d~liiAtGs~~ 120 (164)
.+.+.+++.|++++.+ +++.+. ...+.+ ++ ..+.+|.+|+|||+..
T Consensus 154 ~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~--g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 154 TWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETAD--GEYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESS--CEEEEEEEEECCGGGG
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECC--CeEEcCEEEEcCCccH
Confidence 3456667789999887 565553 222333 33 2589999999999743
No 468
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=71.37 E-value=1.3 Score=37.20 Aligned_cols=19 Identities=26% Similarity=0.172 Sum_probs=16.7
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
-.|+|||||..|+.+|..|
T Consensus 47 ~dvvIIG~G~aGl~aA~~l 65 (623)
T 3pl8_A 47 YDVVIVGSGPIGCTYAREL 65 (623)
T ss_dssp EEEEEECCSHHHHHHHHHH
T ss_pred CCEEEECCcHHHHHHHHHH
Confidence 3699999999999999765
No 469
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=71.29 E-value=7.1 Score=32.78 Aligned_cols=45 Identities=4% Similarity=0.048 Sum_probs=31.4
Q ss_pred hHHHHhhcCceEEee-EEEEe--eCcEEEe---CCeeEEEEeceEEEecCCCC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFV--DKHRVKF---AGEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~--~~~~v~v---~~~~~~~~~d~liiAtGs~~ 120 (164)
+.+.+++.|++++.+ +++.+ +...+.+ ++ ..+.+|.+|+|||...
T Consensus 423 L~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G--~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 423 VLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGD--QQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTS--CEEEESEEEECCGGGG
T ss_pred HHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCC--CEEECCEEEECCCcch
Confidence 445667789999887 55554 3333444 33 4699999999999864
No 470
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=71.14 E-value=8.8 Score=31.46 Aligned_cols=49 Identities=18% Similarity=0.240 Sum_probs=32.2
Q ss_pred hhHHHHhhcCceEEee-EEEEe--eC-cE---EEe---CCeeEEEEeceEEEecCCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFV--DK-HR---VKF---AGEERTVSAQNFIIAVGGRPT 121 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~--~~-~~---v~v---~~~~~~~~~d~liiAtGs~~~ 121 (164)
.+.+.+++.|++++.+ +++.+ +. .. +.+ ++....+.+|.+|+|||+...
T Consensus 255 ~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 255 TLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 3456667789999987 45444 23 32 333 342236889999999998764
No 471
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=71.08 E-value=4 Score=26.15 Aligned_cols=41 Identities=15% Similarity=0.238 Sum_probs=33.1
Q ss_pred CCCCCccEEEEecCCCCh----hHHHHHHHhhcCCCCcceEEeece
Q psy7674 7 APPDYNFQVVELDKLPNG----AQIQTALFERTGQKTVPNIFIHGK 48 (164)
Q Consensus 7 ~~~~~~~~~~~i~~~~~~----~~~~~~l~~~~g~~~vp~v~i~~~ 48 (164)
++.|+.+..+++..+|.. +...+.|++ .|....|.++|+|+
T Consensus 40 k~~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~-~G~~~LP~~~VDGe 84 (106)
T 3ktb_A 40 KKQGIIVTRHNLRDEPQVYVSNKTVNDFLQK-HGADALPITLVDGE 84 (106)
T ss_dssp HHTTCCCEEEETTTCTTHHHHSHHHHHHHHT-TCGGGCSEEEETTE
T ss_pred HHCCCEEEEEccccChHHHhcCHHHHHHHHH-cCcccCCEEEECCE
Confidence 457999999999999853 556666654 58889999999999
No 472
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=71.05 E-value=11 Score=30.48 Aligned_cols=48 Identities=21% Similarity=0.215 Sum_probs=31.1
Q ss_pred hhHHHHhhcCceEEee-EEEEe--e-CcE---EEe--CCeeEEEEec-eEEEecCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFV--D-KHR---VKF--AGEERTVSAQ-NFIIAVGGRP 120 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~--~-~~~---v~v--~~~~~~~~~d-~liiAtGs~~ 120 (164)
.+.+.+++.|++++.+ .++.+ + ... +.+ ++....+.++ .+|+|||+-.
T Consensus 207 ~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 207 PLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 3455667789999987 45544 3 222 233 3433468896 9999999865
No 473
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=71.00 E-value=1.2 Score=28.17 Aligned_cols=17 Identities=29% Similarity=0.764 Sum_probs=13.1
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 25 ~lv~f~~~~C~~C~~~~ 41 (138)
T 4evm_A 25 VYLKFWASWCSICLASL 41 (138)
T ss_dssp EEEEECCTTCHHHHHHH
T ss_pred EEEEEEcCcCHHHHHHH
Confidence 35558899999998754
No 474
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=70.78 E-value=1.4 Score=29.66 Aligned_cols=31 Identities=16% Similarity=0.435 Sum_probs=18.9
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... .+.++.+ .++.++
T Consensus 54 vll~F~a~~C~~C~~~~~-~l~~l~~-~~v~vv 84 (168)
T 2b1k_A 54 VLLNVWATWCPTCRAEHQ-YLNQLSA-QGIRVV 84 (168)
T ss_dssp EEEEEECTTCHHHHHHHH-HHHHHHH-TTCCEE
T ss_pred EEEEEECCCCHHHHHHHH-HHHHHHH-CCCEEE
Confidence 455578999999997642 2233333 366664
No 475
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=70.75 E-value=2.2 Score=30.44 Aligned_cols=33 Identities=6% Similarity=0.206 Sum_probs=20.9
Q ss_pred ceEEEe-ccCCcccccccch--hhHHHHhhcCceEE
Q psy7674 54 SVVIFS-KSWCPFCTKAKEN--NYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~-~~~cp~~~~~~~~--~~~~~l~~~gv~~~ 86 (164)
.++.|- .+|||+|...... .+.+.+++.++.++
T Consensus 55 vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv 90 (213)
T 2i81_A 55 VLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELL 90 (213)
T ss_dssp EEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEE
T ss_pred EEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 344577 8999999986522 23344555677764
No 476
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=70.74 E-value=7.1 Score=30.88 Aligned_cols=50 Identities=18% Similarity=0.220 Sum_probs=32.7
Q ss_pred hHHHHhhcCceEEee-EEEEe--eCcE---EEe----CCeeEEEEeceEEEecCCCCCCC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFV--DKHR---VKF----AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~--~~~~---v~v----~~~~~~~~~d~liiAtGs~~~~p 123 (164)
+.+.+.+.|++++.+ +++.+ +... +.+ +++...+.+|.+|.|+|..+.+.
T Consensus 106 L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr 165 (453)
T 3atr_A 106 VLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFR 165 (453)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTG
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhH
Confidence 445566689999987 44444 2333 333 33223789999999999876543
No 477
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=70.67 E-value=1.1 Score=30.56 Aligned_cols=28 Identities=25% Similarity=0.545 Sum_probs=18.8
Q ss_pred CceEEEeccCCcccccccchhhHHHHhhc
Q psy7674 53 NSVVIFSKSWCPFCTKAKENNYEKELEKN 81 (164)
Q Consensus 53 d~vvv~~~~~cp~~~~~~~~~~~~~l~~~ 81 (164)
-.+++|...|||||..... .+.+++++.
T Consensus 24 v~i~~f~d~~Cp~C~~~~~-~l~~l~~~~ 51 (175)
T 3gyk_A 24 VTVVEFFDYNCPYCRRAMA-EVQGLVDAD 51 (175)
T ss_dssp EEEEEEECTTCHHHHHHHH-HHHHHHHHC
T ss_pred EEEEEEECCCCccHHHHHH-HHHHHHHhC
Confidence 3567799999999998752 233444443
No 478
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=70.44 E-value=1.3 Score=33.45 Aligned_cols=21 Identities=29% Similarity=0.594 Sum_probs=17.5
Q ss_pred ecCCceEEEeccCCccccccc
Q psy7674 50 IDNNSVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 50 ig~d~vvv~~~~~cp~~~~~~ 70 (164)
-+...+++|+-+.||||++..
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~ 166 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKEL 166 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHH
Confidence 356678999999999999865
No 479
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=70.28 E-value=2.6 Score=28.33 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=14.5
Q ss_pred eEEEe-ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 55 VVIFS-KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 55 vvv~~-~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
++.|- .+|||.|..... ....+.+++.++.++
T Consensus 34 vl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v 68 (157)
T 4g2e_A 34 VLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVL 68 (157)
T ss_dssp EEEECSCTTCCC------CCSCGGGGGGGCSSEEE
T ss_pred EEEecCCCCCCccccchhhcccccccccccCceEe
Confidence 33344 799999987642 122233455666654
No 480
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=70.10 E-value=7.2 Score=29.71 Aligned_cols=46 Identities=20% Similarity=0.294 Sum_probs=31.5
Q ss_pred hhHHHHhhcCceEEee-EEEEee--CcEEEe--CCeeEEEEeceEEEecCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVD--KHRVKF--AGEERTVSAQNFIIAVGGRP 120 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~--~~~v~v--~~~~~~~~~d~liiAtGs~~ 120 (164)
.+.+.+++.|++++.+ +++.+. ...+.+ ++ ..+.+|.+|+|+|...
T Consensus 155 ~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~--g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 155 AYRELAEARGAKVLTHTRVEDFDISPDSVKIETAN--GSYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETT--EEEEEEEEEECCGGGH
T ss_pred HHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCC--CEEEeCEEEEecCccH
Confidence 3456677889999887 555553 222333 44 3689999999999753
No 481
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=69.78 E-value=11 Score=29.18 Aligned_cols=44 Identities=14% Similarity=0.088 Sum_probs=31.0
Q ss_pred hHHHHhhcCceEEee-EEEEee--CcE---EEeCCeeEEEEeceEEEecCCC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVD--KHR---VKFAGEERTVSAQNFIIAVGGR 119 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~--~~~---v~v~~~~~~~~~d~liiAtGs~ 119 (164)
+.+.+++.|++++.+ .++.+. ... +.+++ +.+.+|.+|+|+|..
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~g--~~~~ad~VV~a~~~~ 251 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKILIENGKAAGIIADD--RIHDADLVISNLGHA 251 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETT--EEEECSEEEECSCHH
T ss_pred HHHHHHHcCCEEEECCceeEEEEECCEEEEEEECC--EEEECCEEEECCCHH
Confidence 445667789999987 555553 333 33365 679999999999864
No 482
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=69.43 E-value=1.5 Score=30.39 Aligned_cols=28 Identities=14% Similarity=0.252 Sum_probs=18.6
Q ss_pred eccCCccccc-cc--chhhHHHHhhcCceEE
Q psy7674 59 SKSWCPFCTK-AK--ENNYEKELEKNKIDYF 86 (164)
Q Consensus 59 ~~~~cp~~~~-~~--~~~~~~~l~~~gv~~~ 86 (164)
-++|||.|.. .. .....+.+++.|++++
T Consensus 52 pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv 82 (173)
T 3mng_A 52 PGAFTPGCSKTHLPGFVEQAEALKAKGVQVV 82 (173)
T ss_dssp SCTTCHHHHHTHHHHHHHTHHHHHTTTCCEE
T ss_pred eCCCCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 3799999994 42 2233455677788875
No 483
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=69.36 E-value=1.6 Score=37.38 Aligned_cols=19 Identities=11% Similarity=-0.011 Sum_probs=17.1
Q ss_pred CcEEEECCcHHHHHhhccc
Q psy7674 145 GKVLLVGASYIALECAGCD 163 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l 163 (164)
++|+|||||..|+-+|..|
T Consensus 57 ~~v~IiGaGiaGL~aA~~L 75 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYEL 75 (721)
T ss_dssp EEEEEECCSHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHH
Confidence 6899999999999999765
No 484
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=69.34 E-value=2.3 Score=30.23 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=19.8
Q ss_pred eEEEe-ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 55 VVIFS-KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 55 vvv~~-~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
++.|- .+|||.|..... ..+.+.+++.++.++
T Consensus 52 vl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv 86 (211)
T 2pn8_A 52 VFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVV 86 (211)
T ss_dssp EEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEE
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 34466 899999997642 123344555677764
No 485
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=69.10 E-value=2.7 Score=28.32 Aligned_cols=29 Identities=17% Similarity=0.271 Sum_probs=18.5
Q ss_pred Ee-ccCCcccc-cccc--hhhHHHHhhcCce-EE
Q psy7674 58 FS-KSWCPFCT-KAKE--NNYEKELEKNKID-YF 86 (164)
Q Consensus 58 ~~-~~~cp~~~-~~~~--~~~~~~l~~~gv~-~~ 86 (164)
|- .+|||.|. .... ..+.+.+++.|++ ++
T Consensus 42 f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv 75 (162)
T 1tp9_A 42 GVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEIL 75 (162)
T ss_dssp EESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEE
T ss_pred EeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE
Confidence 44 79999999 5542 1233445667888 64
No 486
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=68.96 E-value=2.5 Score=30.26 Aligned_cols=32 Identities=13% Similarity=0.268 Sum_probs=20.4
Q ss_pred eEEEec-cCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 55 VVIFSK-SWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 55 vvv~~~-~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
++.|-. +|||+|..... ..+.+.+++.++.++
T Consensus 73 ll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv 107 (222)
T 3ztl_A 73 VLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVI 107 (222)
T ss_dssp EEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEE
T ss_pred EEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEE
Confidence 344665 99999998652 233445556677764
No 487
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=68.55 E-value=1.2 Score=29.72 Aligned_cols=17 Identities=12% Similarity=0.387 Sum_probs=12.7
Q ss_pred ceEEEe-ccCCccccccc
Q psy7674 54 SVVIFS-KSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~-~~~cp~~~~~~ 70 (164)
.++.|- .+|||.|....
T Consensus 39 vvl~F~~a~~C~~C~~~~ 56 (160)
T 1xvw_A 39 VLLVFFPLAFTGICQGEL 56 (160)
T ss_dssp EEEEECSCTTSSHHHHHH
T ss_pred EEEEEECCCCCCchHHHH
Confidence 455575 89999998654
No 488
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=68.53 E-value=2.4 Score=33.01 Aligned_cols=33 Identities=12% Similarity=0.234 Sum_probs=20.0
Q ss_pred ceEEEeccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
.++.|..+|||+|..... ..+.+.+++.++.++
T Consensus 85 vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi 119 (352)
T 2hyx_A 85 VLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVI 119 (352)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEE
Confidence 344478899999987542 123334444566664
No 489
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=68.50 E-value=4.9 Score=27.66 Aligned_cols=30 Identities=20% Similarity=0.190 Sum_probs=20.1
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcCce
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNKID 84 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~gv~ 84 (164)
.+++|...|||||..... .+.++.++.+.+
T Consensus 25 ~i~~f~d~~Cp~C~~~~~-~l~~l~~~~~~~ 54 (195)
T 2znm_A 25 EVLEFFGYFCVHCHHFDP-LLLKLGKALPSD 54 (195)
T ss_dssp EEEEEECTTSCCTTSSCH-HHHHHHHHSCTT
T ss_pred EEEEEECCCChhHHHHhH-HHHHHHHHCCCc
Confidence 467799999999998753 234555555433
No 490
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=68.48 E-value=2.2 Score=29.29 Aligned_cols=31 Identities=16% Similarity=0.113 Sum_probs=19.0
Q ss_pred EEEe-ccCCcccccccc--hhhHHHHhhcCceEE
Q psy7674 56 VIFS-KSWCPFCTKAKE--NNYEKELEKNKIDYF 86 (164)
Q Consensus 56 vv~~-~~~cp~~~~~~~--~~~~~~l~~~gv~~~ 86 (164)
+.|- .+|||+|..... ..+.+.+++.|+.++
T Consensus 56 l~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv 89 (179)
T 3ixr_A 56 LYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVL 89 (179)
T ss_dssp EEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred EEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEE
Confidence 3344 799999997642 223344556677764
No 491
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=68.35 E-value=8.1 Score=30.03 Aligned_cols=43 Identities=23% Similarity=0.295 Sum_probs=30.9
Q ss_pred hHHHHhhcCceEEee-EEEEee--CcEEEe--CCeeEEEEeceEEEecCCC
Q psy7674 74 YEKELEKNKIDYFNA-KAVFVD--KHRVKF--AGEERTVSAQNFIIAVGGR 119 (164)
Q Consensus 74 ~~~~l~~~gv~~~~~-~~~~~~--~~~v~v--~~~~~~~~~d~liiAtGs~ 119 (164)
+.+.+++.|++++.+ .++.+. ...+ + ++ +.+.+|.+|+|+|..
T Consensus 195 l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V~~~g--~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 195 LERIIMENKGKILTRKEVVEINIEEKKV-YTRDN--EEYSFDVAISNVGVR 242 (421)
T ss_dssp HHHHHHTTTCEEESSCCEEEEETTTTEE-EETTC--CEEECSEEEECSCHH
T ss_pred HHHHHHHCCCEEEcCCeEEEEEEECCEE-EEeCC--cEEEeCEEEECCCHH
Confidence 345567789999988 566664 2344 4 44 679999999999864
No 492
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=68.17 E-value=1.7 Score=28.64 Aligned_cols=17 Identities=29% Similarity=0.667 Sum_probs=13.9
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+||++|....
T Consensus 58 vlv~F~a~wC~~C~~~~ 74 (148)
T 3p2a_A 58 MVIDFWAPWCGPCRSFA 74 (148)
T ss_dssp EEEEEECSSCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 45668999999999865
No 493
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=67.99 E-value=1.7 Score=28.35 Aligned_cols=17 Identities=29% Similarity=0.722 Sum_probs=14.0
Q ss_pred ceEEEeccCCccccccc
Q psy7674 54 SVVIFSKSWCPFCTKAK 70 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~ 70 (164)
.++.|..+|||+|....
T Consensus 53 vvv~f~~~~C~~C~~~~ 69 (140)
T 1v98_A 53 TLVDFFAPWCGPCRLVS 69 (140)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCCHHHHHHH
Confidence 45668999999998865
No 494
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=67.75 E-value=5.4 Score=29.77 Aligned_cols=33 Identities=15% Similarity=0.268 Sum_probs=24.2
Q ss_pred EEeeCcEEEe-CCeeEEEEeceEEEecCCCCCCCCC
Q psy7674 91 VFVDKHRVKF-AGEERTVSAQNFIIAVGGRPTYPDI 125 (164)
Q Consensus 91 ~~~~~~~v~v-~~~~~~~~~d~liiAtGs~~~~p~i 125 (164)
..++...+.+ ++ +.+.+|.+++|||.+|..+.+
T Consensus 257 ~~~~~~~v~~~~g--~~i~~D~vi~a~G~~p~~~~l 290 (357)
T 4a9w_A 257 ARFSPTGMQWADG--TERAFDAVIWCTGFRPALSHL 290 (357)
T ss_dssp SEEETTEEECTTS--CEEECSEEEECCCBCCCCGGG
T ss_pred ceEeCCeeEECCC--CEecCCEEEECCCcCCCCccc
Confidence 3445555666 55 689999999999999886543
No 495
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=67.61 E-value=0.96 Score=34.41 Aligned_cols=47 Identities=17% Similarity=0.121 Sum_probs=30.0
Q ss_pred cccccCCCCCccEEEEecCCCChhHHHHHHHhhcCCCCcceEEeeceE
Q psy7674 2 VDIQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKH 49 (164)
Q Consensus 2 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~g~~~vp~v~i~~~~ 49 (164)
+++.+++...++..+++|..+.. +.+..+.+..|-+++|++|++|+.
T Consensus 215 l~p~le~lA~~l~~Vd~d~~d~~-~~~~~la~~~gI~~vPT~~i~G~~ 261 (291)
T 3kp9_A 215 QKELFGAAFDQVPYVECSPNGPG-TPQAQECTEAGITSYPTWIINGRT 261 (291)
T ss_dssp HHHHHGGGGGGSCEEESCSSCSS-SCCCHHHHTTTCCSTTEEEETTEE
T ss_pred HHHHHHHHHHHcCEEEEeecCch-hhHHHHHHHcCCcccCeEEECCEE
Confidence 34566666666678888854321 112334445688999999998873
No 496
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=67.58 E-value=1.9 Score=32.76 Aligned_cols=20 Identities=20% Similarity=0.032 Sum_probs=17.8
Q ss_pred CcEEEECCcHHHHHhhcccC
Q psy7674 145 GKVLLVGASYIALECAGCDK 164 (164)
Q Consensus 145 ~~vvViGgG~~g~E~A~~l~ 164 (164)
.+|+|||.|-+|.++|..|+
T Consensus 37 ~~VlVvGaGGlGs~va~~La 56 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLT 56 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHH
Confidence 58999999999999998763
No 497
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=67.47 E-value=8.9 Score=30.49 Aligned_cols=42 Identities=21% Similarity=0.440 Sum_probs=28.2
Q ss_pred CceEEee-EEEEeeC---cEE--EeC---CeeEEEEeceEEEecCCCCCCC
Q psy7674 82 KIDYFNA-KAVFVDK---HRV--KFA---GEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 82 gv~~~~~-~~~~~~~---~~v--~v~---~~~~~~~~d~liiAtGs~~~~p 123 (164)
.|+++.+ .+..++. ..+ .++ ++...+.+|.+++|+|.+|+..
T Consensus 225 ~v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 225 KLNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp CCCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC
T ss_pred EEEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc
Confidence 4888877 4555532 333 333 3234799999999999998765
No 498
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=67.41 E-value=2.6 Score=29.13 Aligned_cols=28 Identities=25% Similarity=0.178 Sum_probs=19.6
Q ss_pred ceEEEeccCCcccccccchhhHHHHhhcC
Q psy7674 54 SVVIFSKSWCPFCTKAKENNYEKELEKNK 82 (164)
Q Consensus 54 ~vvv~~~~~cp~~~~~~~~~~~~~l~~~g 82 (164)
.++.|...|||+|..... .+.++.++++
T Consensus 28 ~i~~f~d~~Cp~C~~~~~-~l~~l~~~~~ 55 (192)
T 3h93_A 28 EVVELFWYGCPHCYAFEP-TIVPWSEKLP 55 (192)
T ss_dssp EEEEEECTTCHHHHHHHH-HHHHHHHTCC
T ss_pred EEEEEECCCChhHHHhhH-HHHHHHHhCC
Confidence 467799999999998763 3445555553
No 499
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=67.37 E-value=21 Score=27.19 Aligned_cols=51 Identities=14% Similarity=0.041 Sum_probs=33.3
Q ss_pred hhHHHHhhcCceEEee-EEEEeeC-----cEEEe--CCeeEEEEeceEEEecCCCCCCC
Q psy7674 73 NYEKELEKNKIDYFNA-KAVFVDK-----HRVKF--AGEERTVSAQNFIIAVGGRPTYP 123 (164)
Q Consensus 73 ~~~~~l~~~gv~~~~~-~~~~~~~-----~~v~v--~~~~~~~~~d~liiAtGs~~~~p 123 (164)
.+.+.+.+.|++++.+ +++.+.. -.+++ ++....+.+|.+|.|+|..+.+.
T Consensus 108 ~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~vr 166 (394)
T 1k0i_A 108 DLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGISR 166 (394)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCSTG
T ss_pred HHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHHH
Confidence 3445556679999887 4555531 23444 45222699999999999877643
No 500
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=67.34 E-value=3.2 Score=27.19 Aligned_cols=32 Identities=16% Similarity=0.285 Sum_probs=19.2
Q ss_pred eEEEeccCCcc--cccccch--hhHHHH-hhcCceEE
Q psy7674 55 VVIFSKSWCPF--CTKAKEN--NYEKEL-EKNKIDYF 86 (164)
Q Consensus 55 vvv~~~~~cp~--~~~~~~~--~~~~~l-~~~gv~~~ 86 (164)
++.|..+|||+ |...... .+.+.+ +..++.++
T Consensus 37 ll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v 73 (150)
T 3fw2_A 37 LINFWASWNDSISQKQSNSELREIYKKYKKNKYIGML 73 (150)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEE
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEE
Confidence 44478899999 9876421 233334 44456664
Done!