RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7674
(164 letters)
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium
falciparum [TaxId: 5833]}
Length = 117
Score = 52.4 bits (125), Expect = 4e-10
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 122 YPDIPGAHLGITSDDLFSLNKDPGKVLLVGASYIALECAGC 162
+P + G I+SD+ F++ K+ K+ +VG+ YIA+E
Sbjct: 1 FPPVKGIENTISSDEFFNI-KESKKIGIVGSGYIAVELINV 40
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli
[TaxId: 562]}
Length = 116
Score = 50.1 bits (119), Expect = 2e-09
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 124 DIPGAHLGITSDDLFSLNKDPGKVLLVGASYIALECAGC 162
DIPG GI SD F+L P +V +VGA YI +E G
Sbjct: 1 DIPGVEYGIDSDGFFALPALPERVAVVGAGYIGVELGGV 39
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia
fasciculata [TaxId: 5656]}
Length = 117
Score = 48.3 bits (114), Expect = 1e-08
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 127 GAHLGITSDDLFSLNKDPGKVLLVGASYIALECAGC 162
G L ITS++ F L++ P + L VG YI++E AG
Sbjct: 1 GDDLCITSNEAFYLDEAPKRALCVGGGYISIEFAGI 36
>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma
cruzi [TaxId: 5693]}
Length = 117
Score = 47.9 bits (113), Expect = 2e-08
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 125 IPGAHLGITSDDLFSLNKDPGKVLLVGASYIALECAGCD 163
IPG I+S++ F L + P +VL VG +I++E AG
Sbjct: 1 IPGIEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIF 39
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase
{Pyrococcus furiosus [TaxId: 2261]}
Length = 122
Score = 46.2 bits (109), Expect = 8e-08
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Query: 119 RPTYPDIPGAHLGITSDDLFSLN------KDPGKVLLVGASYIALECAGC 162
R P I G +T +F + ++ G+ +++G +I LE AG
Sbjct: 1 RAREPQIKGKEYLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGN 50
>d1ktea_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 105
Score = 45.8 bits (108), Expect = 8e-08
Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 11/96 (11%)
Query: 48 KHIDNNSVVIFSKSWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTV 107
I VV+F K CPFC K +E + K + F D + ++ ++ T
Sbjct: 7 SKIQPGKVVVFIKPTCPFCRKTQE-LLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTG 65
Query: 108 SAQNFIIAVGGRPTYPDIPGAHLGITSDDLFSLNKD 143
+ + +G +G DL S++K
Sbjct: 66 ARTVPRVFIGKE---------CIG-GCTDLESMHKR 91
Score = 27.0 bits (59), Expect = 0.57
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 12 NFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHI 50
+ V++ + +IQ L + TG +TVP +FI + I
Sbjct: 41 LLEFVDITATSDTNEIQDYLQQLTGARTVPRVFIGKECI 79
>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 45.2 bits (106), Expect = 2e-07
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 124 DIPGAHLGITSDDLFSLNKDPGKVLLVGASYIALECAGC 162
IPGA LGITSD F L + PG+ ++VGA YIA+E AG
Sbjct: 2 QIPGASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGI 40
>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Escherichia coli [TaxId: 562]}
Length = 85
Score = 44.2 bits (104), Expect = 2e-07
Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 14/91 (15%)
Query: 55 VVIFSKSWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFII 114
VIF +S CP+C +AK+ EK + + + +VD E+
Sbjct: 3 TVIFGRSGCPYCVRAKD-----LAEKLSNERDDFQYQYVDIRAEGITKEDL------QQK 51
Query: 115 AVGGRPTYP--DIPGAHLGITSDDLFSLNKD 143
A T P + H+G D + K+
Sbjct: 52 AGKPVETVPQIFVDQQHIG-GYTDFAAWVKE 81
Score = 29.6 bits (66), Expect = 0.043
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 12 NFQVVELDKLPNGAQIQTALFE-RTGQKTVPNIFIHGKHI 50
+FQ +D G + + +TVP IF+ +HI
Sbjct: 30 DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFVDQQHI 69
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 122
Score = 44.7 bits (105), Expect = 3e-07
Identities = 24/36 (66%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 126 PGAH-LGITSDDLFSLNKDPGKVLLVGASYIALECA 160
PG I+SDDLFSL PGK L+VGASY+ALECA
Sbjct: 1 PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECA 36
>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase
{Neisseria meningitidis [TaxId: 487]}
Length = 125
Score = 43.3 bits (101), Expect = 1e-06
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 120 PTYPDIPGAHLGITSDDLFSLNKDPGKVLLVGASYIALECAGC 162
P IP I S +L + PGK+L++G I LE
Sbjct: 2 TKLPFIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTV 44
>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 117
Score = 41.0 bits (95), Expect = 8e-06
Identities = 8/37 (21%), Positives = 19/37 (51%)
Query: 123 PDIPGAHLGITSDDLFSLNKDPGKVLLVGASYIALEC 159
P+ ++ + S +L + P ++++G YI +E
Sbjct: 1 PNFKFSNRILDSTGALNLGEVPKSLVVIGGGYIGIEL 37
>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Escherichia coli, Grx3 [TaxId: 562]}
Length = 82
Score = 40.0 bits (93), Expect = 8e-06
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 21/91 (23%)
Query: 55 VVIFSKSWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFII 114
V I++K CP+C +AK K + ++ + + + +I
Sbjct: 3 VEIYTKETCPYCHRAKALLSSKGVSFQELPI------------------DGNAAKREEMI 44
Query: 115 AVGGRPTYP--DIPGAHLGITSDDLFSLNKD 143
GR T P I H+G DDL++L+
Sbjct: 45 KRSGRTTVPQIFIDAQHIG-GYDDLYALDAR 74
Score = 29.6 bits (66), Expect = 0.043
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 26 QIQTALFERTGQKTVPNIFIHGKHI 50
+ + +R+G+ TVP IFI +HI
Sbjct: 38 AKREEMIKRSGRTTVPQIFIDAQHI 62
>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of
Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}
Length = 74
Score = 39.5 bits (92), Expect = 9e-06
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 53 NSVVIFSKSWCPFCTKAKE 71
S+ IF+K CPFC KAK+
Sbjct: 5 ESISIFTKPGCPFCAKAKQ 23
Score = 29.1 bits (65), Expect = 0.064
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 27 IQTALFERTGQKTVPNIFIHGKHI 50
++ +G+ TVP +FI GKHI
Sbjct: 42 TIVSVRAVSGRTTVPQVFIGGKHI 65
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 115
Score = 40.2 bits (93), Expect = 1e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 125 IPGAHLGITSDDLFSLNKDPGKVLLVGASYIALECAG 161
+P I+S + + P +++VG YI LE
Sbjct: 2 LPLGGPVISSTEALAPKALPQHLVVVGGGYIGLELGI 38
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin
{Corynebacterium ammoniagenes [TaxId: 1697]}
Length = 74
Score = 37.3 bits (86), Expect = 6e-05
Identities = 9/51 (17%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Query: 54 SVVIFSKSWCPFCTKAKE--NNYEKELEKNKIDYFNAKAVFVDKHRVKFAG 102
S+ +++K C CT K+ + I + +V A
Sbjct: 2 SITLYTKPACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMALGYVQAP 52
Score = 26.5 bits (58), Expect = 0.51
Identities = 4/21 (19%), Positives = 7/21 (33%)
Query: 30 ALFERTGQKTVPNIFIHGKHI 50
G P + + G+H
Sbjct: 41 DYVMALGYVQAPVVEVDGEHW 61
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase,
BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 121
Score = 36.6 bits (84), Expect = 2e-04
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
Query: 123 PDIPGAHLGI----TSDDLFSLN---KDPGKVLLVGASYIALECAGC 162
P + GA + + T +D + + ++L+VG I LE A
Sbjct: 2 PTLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAAT 48
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 122
Score = 36.7 bits (84), Expect = 3e-04
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Query: 126 PGAHLG----ITSDDLFSLNKDPGKVLLVGASYIALECAGC 162
PG + ++S SL + P ++ ++G I LE
Sbjct: 1 PGIEIDEEKIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSV 41
>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden
pea (Pisum sativum) [TaxId: 3888]}
Length = 123
Score = 35.6 bits (81), Expect = 7e-04
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 125 IPGAHLG----ITSDDLFSLNKDPGKVLLVGASYIALECAGC 162
+PG + ++S +L++ P K++++GA YI LE
Sbjct: 2 LPGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSV 43
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 119
Score = 34.7 bits (79), Expect = 0.001
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 132 ITSDDLFSLNKDPGKVLLVGASYIALECAGC 162
+ S PGK+ ++GA I LE
Sbjct: 10 VDSTGALDFQNVPGKLGVIGAGVIGLELGSV 40
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia
coli [TaxId: 562]}
Length = 76
Score = 33.9 bits (77), Expect = 0.001
Identities = 4/17 (23%), Positives = 9/17 (52%)
Query: 54 SVVIFSKSWCPFCTKAK 70
+ I++++ C C K
Sbjct: 2 RITIYTRNDCVQCHATK 18
Score = 27.0 bits (59), Expect = 0.34
Identities = 6/41 (14%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Query: 10 DYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHI 50
++F+++ +D++P A+ G + +P +
Sbjct: 25 GFDFEMINVDRVPEAAE----ALRAQGFRQLPVVIAGDLSW 61
>d1wika_ c.47.1.1 (A:) Thioredoxin-like protein 2 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 109
Score = 33.8 bits (77), Expect = 0.002
Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 26/101 (25%)
Query: 50 IDNNSVVIFSK-----SWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEE 104
+ SV++F K + C F + E L ++Y + + +
Sbjct: 12 TNKASVMLFMKGNKQEAKCGFSKQILE-----ILNSTGVEY---ETFDILEDEEV----- 58
Query: 105 RTVSAQNFIIAVGGRPTYP--DIPGAHLGITSDDLFSLNKD 143
+ + PTYP + G +G D + L +
Sbjct: 59 -----RQGLKTFSNWPTYPQLYVRGDLVG-GLDIVKELKDN 93
Score = 27.7 bits (61), Expect = 0.31
Identities = 5/41 (12%), Positives = 15/41 (36%)
Query: 10 DYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHI 50
+ E + +++ L + T P +++ G +
Sbjct: 41 NSTGVEYETFDILEDEEVRQGLKTFSNWPTYPQLYVRGDLV 81
>d1abaa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Bacteriophage T4 [TaxId: 10665]}
Length = 87
Score = 32.4 bits (73), Expect = 0.006
Identities = 10/67 (14%), Positives = 18/67 (26%), Gaps = 8/67 (11%)
Query: 59 SKSWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGG 118
+ C C AK L K + + + + + F E+
Sbjct: 10 NIHKCGPCDNAKR-----LLTVKKQPF---EFINIMPEKGVFDDEKIAELLTKLGRDTQI 61
Query: 119 RPTYPDI 125
T P +
Sbjct: 62 GLTMPQV 68
Score = 28.1 bits (62), Expect = 0.15
Identities = 6/25 (24%), Positives = 10/25 (40%), Gaps = 1/25 (4%)
Query: 27 IQTALFERTGQKTVPNIFIH-GKHI 50
+ + T+P +F G HI
Sbjct: 52 LTKLGRDTQIGLTMPQVFAPDGSHI 76
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 31.4 bits (70), Expect = 0.031
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 18/103 (17%)
Query: 72 NNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGA--- 128
+YE L KN +D A FVD ++ G T++A + +IA GGRP++P P
Sbjct: 95 TSYENVLGKNNVDVIKGFARFVDAKTLEVNG--ETITADHILIATGGRPSHPREPANDNI 152
Query: 129 -----------HLGITSDDLFSLNKDPGKVLLVGASYIALECA 160
I D + N + VG + A+E
Sbjct: 153 NLEAAGVKTNEKGYIVVDKYQNTN--IEGIYAVGDNTGAVELT 193
>d1ttza_ c.47.1.1 (A:) Hypothetical protein XCC2852 {Xanthomonas
campestris [TaxId: 339]}
Length = 75
Score = 29.1 bits (65), Expect = 0.063
Identities = 4/18 (22%), Positives = 10/18 (55%)
Query: 54 SVVIFSKSWCPFCTKAKE 71
++ ++ + C C +A E
Sbjct: 1 ALTLYQRDDCHLCDQAVE 18
>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing
protein C330018D20Rik {Mouse (Mus musculus) [TaxId:
10090]}
Length = 100
Score = 28.6 bits (63), Expect = 0.13
Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Query: 55 VVIFSKSWCPFCTKAKE------NNYEKELEKNKIDYFNAKA 90
+ +F+K+ CP C +AKE + + + + +
Sbjct: 19 LTLFTKAPCPLCDEAKEVLQPYKDRFILQEVDITLPENSTWY 60
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis
[TaxId: 1351]}
Length = 123
Score = 27.9 bits (61), Expect = 0.32
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 10/48 (20%)
Query: 125 IPGAHL-GI----TSDDLFSL-----NKDPGKVLLVGASYIALECAGC 162
IPG L I L + + V+++G+ YI +E A
Sbjct: 1 IPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEA 48
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 27.9 bits (61), Expect = 0.59
Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 20/111 (18%)
Query: 43 IFIHGKHIDNNSVVIFSKSWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAG 102
I ++G N + +K K E +KNK+ Y+ F D+ +++
Sbjct: 74 IDVNGDIKINVANFQKAKDDA---VKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTP 130
Query: 103 E---------ERTVSAQNFII--------AVGGRPTYPDIPGAHLGITSDD 136
+ + +N I+ VG RP + +G+ D
Sbjct: 131 VDGLEGTVKEDHILDVKNIIVATGSEVTPFVGRRPYIAGLGAEKIGLEVDK 181
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase
{Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 27.0 bits (58), Expect = 0.84
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 146 KVLLVGASYIALECAG 161
KV++VG E A
Sbjct: 2 KVVIVGNGPGGFELAK 17
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M
oxidoreductase/carboxylase {Xanthobacter sp., py2
[TaxId: 35809]}
Length = 121
Score = 26.9 bits (58), Expect = 0.86
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 8/37 (21%)
Query: 131 GITSDDLF-------SLNKDPGK-VLLVGASYIALEC 159
G+ + +F L+ +PG V++VG S A+E
Sbjct: 1 GVNAKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEY 37
>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like
protein {Archaeon Methanococcus jannaschii [TaxId:
2190]}
Length = 85
Score = 26.1 bits (56), Expect = 0.92
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 55 VVIFSKSWCPFCTKAKENNY 74
+ +F+ CP C AK
Sbjct: 6 IELFTSPMCPHCPAAKRVVE 25
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 26.6 bits (57), Expect = 1.1
Identities = 3/18 (16%), Positives = 8/18 (44%)
Query: 144 PGKVLLVGASYIALECAG 161
V+++GA ++
Sbjct: 3 KAPVVVLGAGLASVSFVA 20
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 26.7 bits (57), Expect = 1.3
Identities = 5/16 (31%), Positives = 10/16 (62%)
Query: 146 KVLLVGASYIALECAG 161
KV+++G+S+ E
Sbjct: 2 KVIVLGSSHGGYEAVE 17
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit
F (AhpF), N-terminal domain {Salmonella typhimurium
[TaxId: 90371]}
Length = 96
Score = 25.9 bits (56), Expect = 1.4
Identities = 6/68 (8%), Positives = 10/68 (14%), Gaps = 3/68 (4%)
Query: 55 VVIFSKSWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEER--TVSAQNF 112
+ C C N A ++ + V
Sbjct: 19 FETYYSLSCHNC-PDVVQALNLMAVLNPRIKHTAIDGGTFQNEITERNVMGVPAVFVNGK 77
Query: 113 IIAVGGRP 120
G
Sbjct: 78 EFGQGRMT 85
>d1i5ga_ c.47.1.10 (A:) Tryparedoxin II {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 25.9 bits (56), Expect = 1.6
Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 4/95 (4%)
Query: 55 VVIFSKSWCPFCTKAKENNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFII 114
FS SWCP + K + N + + + ++ +
Sbjct: 32 FFYFSASWCPPSR--AFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLAL 89
Query: 115 AVGGRPTYPDIPGAHLGITS-DDLFSLNKDPGKVL 148
R + + S L + D G ++
Sbjct: 90 PFEDRKGMEFL-TTGFDVKSIPTLVGVEADSGNII 123
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 25.9 bits (55), Expect = 2.0
Identities = 5/16 (31%), Positives = 8/16 (50%)
Query: 146 KVLLVGASYIALECAG 161
V++VG +E A
Sbjct: 5 NVVIVGTGLAGVEVAF 20
>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial
p450 systems {Cow (Bos taurus) [TaxId: 9913]}
Length = 225
Score = 26.0 bits (56), Expect = 2.5
Identities = 11/117 (9%), Positives = 28/117 (23%), Gaps = 10/117 (8%)
Query: 4 IQTAPPDYNFQVVELDKLPNGAQIQTALFERTGQKTVPNIFIHGKHIDNNSVVIFSKSWC 63
P D+ + + + L RT + P + + +
Sbjct: 115 PMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEK-PGVEEAARRASASRAWGLRFFRS 173
Query: 64 PFCTKAKENNYEK---ELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVG 117
P + L +++ R G+ + + ++G
Sbjct: 174 PQQVLPSPDGRRAAGIRLAVTRLEGIGEA------TRAVPTGDVEDLPCGLVLSSIG 224
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 25.1 bits (53), Expect = 3.7
Identities = 5/15 (33%), Positives = 7/15 (46%)
Query: 146 KVLLVGASYIALECA 160
KV++VG A
Sbjct: 4 KVVVVGGGTGGATAA 18
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 137
Score = 25.1 bits (54), Expect = 3.7
Identities = 4/26 (15%), Positives = 13/26 (50%)
Query: 135 DDLFSLNKDPGKVLLVGASYIALECA 160
L ++++ + ++G ++ E A
Sbjct: 28 RSLEKISREVKSITIIGGGFLGSELA 53
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like
protein {Archaeon Methanobacterium thermoautotrophicum
[TaxId: 145262]}
Length = 85
Score = 24.3 bits (52), Expect = 3.8
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 55 VVIFSKSWCPFCTKAK 70
+ +F+ CP+C A
Sbjct: 5 IEVFTSPTCPYCPMAI 20
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY,
DsbE) {Escherichia coli [TaxId: 562]}
Length = 136
Score = 24.6 bits (52), Expect = 4.7
Identities = 7/43 (16%), Positives = 15/43 (34%), Gaps = 4/43 (9%)
Query: 32 FERTGQKTVPNIFIHGKHIDNNSVVIFSKSWCPFCTKAKENNY 74
+ GQ ++ GK + ++ +WCP +
Sbjct: 5 LDNPGQFYQADVLTQGKPV----LLNVWATWCPTSRAEHQYLN 43
>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 162
Score = 24.5 bits (52), Expect = 5.5
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 97 RVKFAGEERTVSAQNFIIAVG 117
V GE + ++ N +I G
Sbjct: 140 HVVINGETQVLAVDNVVICAG 160
>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus
subtilis [TaxId: 1423]}
Length = 114
Score = 23.8 bits (51), Expect = 6.7
Identities = 8/31 (25%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 55 VVIFSKSWCPFCTKAKENNYEKELEKNKIDY 85
V +++ C C KA+ LE+++I +
Sbjct: 2 VTLYTSPSCTSCRKAR-----AWLEEHEIPF 27
>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein
Bta {Streptococcus pneumoniae [TaxId: 1313]}
Length = 115
Score = 24.1 bits (51), Expect = 7.2
Identities = 4/17 (23%), Positives = 6/17 (35%)
Query: 55 VVIFSKSWCPFCTKAKE 71
+ CP+C K
Sbjct: 30 TFFIGRKTCPYCRKFAG 46
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.413
Gapped
Lambda K H
0.267 0.0505 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 621,810
Number of extensions: 27760
Number of successful extensions: 154
Number of sequences better than 10.0: 1
Number of HSP's gapped: 150
Number of HSP's successfully gapped: 64
Length of query: 164
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 85
Effective length of database: 1,322,926
Effective search space: 112448710
Effective search space used: 112448710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.2 bits)