Query psy7679
Match_columns 608
No_of_seqs 493 out of 3358
Neff 7.6
Searched_HMMs 46136
Date Sat Aug 17 00:38:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7679.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7679hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03863 M14_CPD_II The second 100.0 2E-80 4.4E-85 654.6 35.2 359 117-506 2-375 (375)
2 cd03869 M14_CPX_like Peptidase 100.0 9.4E-80 2E-84 649.3 33.4 359 118-504 2-405 (405)
3 cd03865 M14_CPE_H Peptidase M1 100.0 2.3E-78 5E-83 639.1 34.1 361 117-505 1-402 (402)
4 cd03864 M14_CPN Peptidase M14 100.0 8.8E-78 1.9E-82 637.2 34.8 353 121-505 1-392 (392)
5 cd06245 M14_CPD_III The third 100.0 1.6E-75 3.4E-80 616.4 35.0 348 120-505 1-362 (363)
6 KOG2649|consensus 100.0 1.6E-75 3.5E-80 606.8 30.7 365 117-510 65-459 (500)
7 cd03866 M14_CPM Peptidase M14 100.0 1.2E-72 2.6E-77 597.8 34.5 344 118-492 2-361 (376)
8 cd03867 M14_CPZ Peptidase M14- 100.0 1.8E-71 3.8E-76 593.7 34.8 355 121-504 1-395 (395)
9 cd03868 M14_CPD_I The first ca 100.0 4.1E-70 8.9E-75 581.4 35.3 354 121-504 1-372 (372)
10 cd03858 M14_CP_N-E_like Carbox 100.0 1.8E-66 3.9E-71 555.3 35.7 357 121-504 1-374 (374)
11 KOG2650|consensus 100.0 3.8E-51 8.2E-56 430.8 18.7 270 30-425 115-417 (418)
12 cd03870 M14_CPA Peptidase M14 100.0 7.3E-50 1.6E-54 411.8 23.9 270 31-426 1-298 (301)
13 cd03871 M14_CPB Peptidase M14 100.0 5.1E-50 1.1E-54 412.4 22.7 269 31-425 1-298 (300)
14 cd06246 M14_CPB2 Peptidase M14 100.0 3.3E-48 7.1E-53 399.8 23.0 262 120-425 4-298 (300)
15 cd06247 M14_CPO Peptidase M14 100.0 7.9E-48 1.7E-52 395.4 23.3 262 120-425 3-297 (298)
16 cd03872 M14_CPA6 Carboxypeptid 100.0 1.2E-46 2.7E-51 386.5 22.7 262 121-426 2-296 (300)
17 cd03859 M14_CPT Peptidase M14- 100.0 1.6E-46 3.6E-51 388.4 22.4 252 120-419 3-295 (295)
18 cd06248 M14_CPA_CPB_like Pepti 100.0 3.5E-46 7.6E-51 386.4 22.2 262 120-424 3-302 (304)
19 cd03860 M14_CP_A-B_like The Pe 100.0 7.8E-44 1.7E-48 368.7 23.6 261 121-425 1-293 (294)
20 cd06226 M14_CPT_like Peptidase 100.0 6.7E-44 1.5E-48 365.5 20.1 234 138-422 1-292 (293)
21 cd06905 Peptidase_M14-like_8 A 100.0 1.8E-42 3.8E-47 363.4 22.4 244 33-400 1-339 (360)
22 smart00631 Zn_pept Zn_pept. 100.0 4.4E-41 9.6E-46 345.6 21.9 234 121-401 1-262 (277)
23 cd06227 Peptidase_M14-like_2 A 100.0 1E-39 2.3E-44 331.5 21.9 230 121-400 2-259 (272)
24 cd06228 Peptidase_M14-like_3 A 100.0 3.7E-40 7.9E-45 340.1 17.3 232 147-417 6-329 (332)
25 PF00246 Peptidase_M14: Zinc c 100.0 1.9E-40 4.2E-45 341.8 14.1 251 127-418 1-279 (279)
26 cd06229 M14_Endopeptidase_I Pe 100.0 2.2E-35 4.8E-40 299.4 15.8 208 150-418 1-254 (255)
27 cd06237 M14_Nna1_like_3 A bact 100.0 5.8E-31 1.3E-35 263.7 17.9 209 122-400 8-226 (244)
28 cd03869 M14_CPX_like Peptidase 100.0 1.5E-31 3.2E-36 283.1 11.8 179 35-245 4-217 (405)
29 cd06246 M14_CPB2 Peptidase M14 100.0 5.3E-31 1.1E-35 272.0 14.1 180 33-244 2-203 (300)
30 cd06247 M14_CPO Peptidase M14 100.0 1.2E-30 2.5E-35 268.4 13.9 180 33-244 1-202 (298)
31 cd03872 M14_CPA6 Carboxypeptid 100.0 1.1E-30 2.4E-35 268.6 12.5 178 35-244 1-200 (300)
32 cd06248 M14_CPA_CPB_like Pepti 100.0 1E-29 2.2E-34 263.5 11.9 180 33-244 1-206 (304)
33 cd06245 M14_CPD_III The third 100.0 8.8E-30 1.9E-34 269.0 11.3 169 35-244 1-182 (363)
34 cd06234 M14_Nna1_like_1 A bact 100.0 1.4E-28 3E-33 248.2 19.0 224 122-402 11-240 (263)
35 cd03865 M14_CPE_H Peptidase M1 100.0 1.3E-29 2.9E-34 268.4 11.6 179 35-245 4-213 (402)
36 cd03863 M14_CPD_II The second 100.0 1.6E-29 3.5E-34 267.5 10.7 170 35-245 5-187 (375)
37 cd03862 Peptidase_M14-like_7 A 100.0 2E-28 4.4E-33 248.6 16.0 192 153-400 9-241 (273)
38 cd03868 M14_CPD_I The first ca 100.0 1.1E-28 2.4E-33 263.4 11.1 172 36-245 1-187 (372)
39 cd03864 M14_CPN Peptidase M14 100.0 1.1E-28 2.3E-33 262.5 10.7 179 36-245 1-205 (392)
40 cd03867 M14_CPZ Peptidase M14- 100.0 1.1E-28 2.4E-33 264.2 10.4 178 36-245 1-207 (395)
41 cd03859 M14_CPT Peptidase M14- 99.9 8.1E-28 1.7E-32 249.0 13.3 179 34-244 2-209 (295)
42 cd03866 M14_CPM Peptidase M14 99.9 5.4E-28 1.2E-32 256.9 10.5 169 35-244 4-184 (376)
43 cd03856 M14_Nna1_like Peptidas 99.9 7.4E-27 1.6E-31 237.6 17.0 218 123-402 12-243 (269)
44 cd00596 Peptidase_M14_like The 99.9 9E-27 1.9E-31 227.7 15.3 190 172-418 1-195 (196)
45 cd06227 Peptidase_M14-like_2 A 99.9 2.6E-27 5.7E-32 240.8 11.6 176 36-244 2-194 (272)
46 cd03858 M14_CP_N-E_like Carbox 99.9 2.7E-27 5.8E-32 253.5 11.5 174 36-245 1-188 (374)
47 cd06908 M14_AGBL4_like Peptida 99.9 3.2E-26 7E-31 230.6 17.7 213 131-403 1-231 (261)
48 cd03860 M14_CP_A-B_like The Pe 99.9 3.3E-26 7.2E-31 237.1 12.5 174 36-243 1-196 (294)
49 smart00631 Zn_pept Zn_pept. 99.9 3.8E-26 8.2E-31 234.9 12.7 177 36-244 1-193 (277)
50 cd06238 Peptidase_M14-like_1_1 99.9 9E-26 1.9E-30 229.0 14.8 180 168-400 47-255 (271)
51 PRK10602 murein peptide amidas 99.9 4.7E-25 1E-29 218.9 14.6 195 143-418 16-230 (237)
52 KOG2649|consensus 99.9 5.7E-25 1.2E-29 229.9 11.8 187 35-245 68-269 (500)
53 cd06226 M14_CPT_like Peptidase 99.9 1.8E-24 3.9E-29 222.1 9.9 160 53-244 1-210 (293)
54 cd06242 Peptidase_M14-like_1_5 99.9 1.4E-23 2.9E-28 213.6 14.3 147 121-310 2-156 (268)
55 cd06235 M14_Nna1_like_2 Subgro 99.9 3.4E-22 7.5E-27 202.5 16.8 205 138-402 9-230 (258)
56 cd06239 Peptidase_M14-like_1_2 99.9 4.6E-22 9.9E-27 197.2 15.2 202 134-399 2-218 (231)
57 PF00246 Peptidase_M14: Zinc c 99.9 2.4E-23 5.1E-28 214.7 5.6 170 42-244 1-188 (279)
58 cd06228 Peptidase_M14-like_3 A 99.9 1.3E-22 2.9E-27 209.8 7.8 160 62-244 6-201 (332)
59 cd06241 Peptidase_M14-like_1_4 99.9 3.6E-21 7.8E-26 195.6 14.5 151 130-318 2-171 (266)
60 cd06904 M14_MpaA_like Peptidas 99.9 1.5E-21 3.2E-26 187.6 10.9 155 172-401 1-164 (178)
61 cd06244 Peptidase_M14-like_1_7 99.9 8.3E-21 1.8E-25 190.2 15.6 150 147-346 1-202 (268)
62 cd06243 Peptidase_M14-like_1_6 99.8 1.5E-20 3.2E-25 187.3 15.8 118 147-307 1-130 (236)
63 cd06907 M14_AGBL2-3_like Pepti 99.8 4.1E-20 8.8E-25 185.1 16.8 205 139-402 11-231 (261)
64 cd06229 M14_Endopeptidase_I Pe 99.8 7.8E-21 1.7E-25 193.0 7.7 149 65-243 1-181 (255)
65 cd06908 M14_AGBL4_like Peptida 99.8 2.7E-20 5.8E-25 187.7 8.5 149 46-245 1-164 (261)
66 cd06236 M14_AGBL5_like Peptida 99.8 3.6E-19 7.8E-24 182.0 15.9 138 142-318 16-188 (304)
67 cd06237 M14_Nna1_like_3 A bact 99.8 6.9E-20 1.5E-24 183.8 9.5 152 35-242 6-165 (244)
68 cd03857 Peptidase_M14-like_1 P 99.8 6.3E-19 1.4E-23 175.8 16.1 127 147-316 1-140 (226)
69 cd06240 Peptidase_M14-like_1_3 99.8 4.7E-19 1E-23 179.4 14.1 178 168-400 56-258 (273)
70 cd06234 M14_Nna1_like_1 A bact 99.8 1.3E-19 2.7E-24 183.2 9.2 149 36-237 10-163 (263)
71 cd06242 Peptidase_M14-like_1_5 99.8 2.1E-18 4.5E-23 175.6 9.3 141 36-232 2-151 (268)
72 cd03870 M14_CPA Peptidase M14 99.7 2.6E-18 5.6E-23 177.7 7.0 88 156-244 99-202 (301)
73 cd03856 M14_Nna1_like Peptidas 99.7 6.7E-18 1.5E-22 172.0 9.0 146 36-235 10-163 (269)
74 cd03871 M14_CPB Peptidase M14 99.7 5.6E-18 1.2E-22 175.0 7.1 89 155-244 98-203 (300)
75 PRK10602 murein peptide amidas 99.7 2E-16 4.4E-21 157.3 9.3 128 57-232 15-157 (237)
76 cd06906 M14_Nna1 Peptidase M14 99.7 2.5E-15 5.5E-20 151.2 17.2 212 138-402 11-250 (278)
77 cd06235 M14_Nna1_like_2 Subgro 99.6 1.5E-16 3.2E-21 161.4 6.2 133 53-236 9-155 (258)
78 cd06239 Peptidase_M14-like_1_2 99.6 4.2E-16 9E-21 154.8 7.5 139 49-244 2-142 (231)
79 cd06231 Peptidase_M14-like_4 A 99.6 2.2E-15 4.8E-20 150.4 12.3 122 142-309 15-141 (236)
80 cd03862 Peptidase_M14-like_7 A 99.6 7E-16 1.5E-20 157.1 6.5 132 67-234 8-159 (273)
81 cd06905 Peptidase_M14-like_8 A 99.6 2.4E-15 5.3E-20 158.5 6.4 62 181-243 208-270 (360)
82 PF13715 DUF4480: Domain of un 99.6 2.6E-14 5.6E-19 121.1 11.3 86 430-525 2-88 (88)
83 cd06241 Peptidase_M14-like_1_4 99.6 4.2E-15 9E-20 151.3 6.7 135 44-232 1-159 (266)
84 cd06236 M14_AGBL5_like Peptida 99.5 3E-14 6.5E-19 146.0 7.1 128 56-233 15-175 (304)
85 cd06232 Peptidase_M14-like_5 P 99.5 1.1E-13 2.3E-18 134.8 9.4 117 148-309 21-145 (240)
86 cd06907 M14_AGBL2-3_like Pepti 99.5 4.8E-14 1E-18 141.5 6.3 136 53-239 10-159 (261)
87 cd06243 Peptidase_M14-like_1_6 99.4 7.4E-14 1.6E-18 139.3 5.7 117 62-232 1-128 (236)
88 cd06244 Peptidase_M14-like_1_7 99.4 9.5E-14 2.1E-18 139.6 5.4 62 152-234 108-169 (268)
89 cd03857 Peptidase_M14-like_1 P 99.3 3E-12 6.6E-17 127.8 5.4 118 62-234 1-131 (226)
90 KOG2650|consensus 99.3 5.7E-12 1.2E-16 134.1 7.8 89 156-244 214-321 (418)
91 PF13620 CarboxypepD_reg: Carb 99.3 2.3E-11 5E-16 101.4 9.5 75 430-505 2-82 (82)
92 cd06904 M14_MpaA_like Peptidas 99.2 3.7E-11 7.9E-16 115.6 7.7 92 126-234 17-110 (178)
93 cd06906 M14_Nna1 Peptidase M14 99.0 3.2E-10 7E-15 114.5 6.5 135 46-235 4-162 (278)
94 cd00596 Peptidase_M14_like The 99.0 1.6E-09 3.5E-14 105.8 8.7 99 126-244 17-115 (196)
95 cd06238 Peptidase_M14-like_1_1 98.9 3.1E-10 6.7E-15 115.7 2.8 122 62-233 1-175 (271)
96 cd06250 M14_PaAOTO_like An unc 98.9 2.8E-08 6E-13 105.8 17.2 128 154-311 14-173 (359)
97 cd06254 M14_ASTE_ASPA_like_4 A 98.9 2E-08 4.4E-13 104.1 15.0 218 170-472 18-242 (288)
98 cd06231 Peptidase_M14-like_4 A 98.9 7.6E-09 1.6E-13 103.6 10.2 119 55-233 13-138 (236)
99 cd06233 Peptidase_M14-like_6 P 98.9 2.9E-08 6.3E-13 101.3 14.6 114 164-318 46-224 (283)
100 cd06232 Peptidase_M14-like_5 P 98.8 2.4E-09 5.2E-14 104.6 4.3 126 38-232 3-141 (240)
101 cd06251 M14_ASTE_ASPA_like_1 A 98.8 2.9E-08 6.3E-13 102.8 12.6 214 170-472 21-238 (287)
102 cd06252 M14_ASTE_ASPA_like_2 A 98.6 8.1E-07 1.7E-11 93.3 16.5 224 169-472 34-263 (316)
103 TIGR02994 ectoine_eutE ectoine 98.6 7.5E-07 1.6E-11 93.6 14.8 222 169-472 47-274 (325)
104 PF10994 DUF2817: Protein of u 98.6 1.5E-06 3.3E-11 91.3 16.9 216 123-399 4-288 (341)
105 cd06255 M14_ASTE_ASPA_like_5 A 98.6 5.1E-07 1.1E-11 93.8 13.4 224 170-473 25-251 (293)
106 cd06230 M14_ASTE_ASPA_like The 98.6 2.1E-07 4.5E-12 94.7 9.5 101 172-318 1-105 (252)
107 cd06253 M14_ASTE_ASPA_like_3 A 98.5 6.6E-07 1.4E-11 93.1 11.9 222 169-472 19-248 (298)
108 PF04952 AstE_AspA: Succinylgl 98.5 1.7E-07 3.6E-12 97.4 5.8 226 170-471 3-238 (292)
109 KOG3641|consensus 98.3 2E-06 4.3E-11 92.6 7.8 158 122-318 380-551 (650)
110 COG2866 Predicted carboxypepti 98.1 3.2E-06 6.9E-11 90.3 6.4 97 141-271 120-222 (374)
111 COG2866 Predicted carboxypepti 98.0 7.6E-06 1.6E-10 87.4 5.1 201 56-316 120-336 (374)
112 PRK02259 aspartoacylase; Provi 98.0 6.7E-05 1.5E-09 77.8 12.0 98 171-309 4-108 (288)
113 PF08400 phage_tail_N: Prophag 97.9 3.7E-05 8E-10 69.4 8.0 64 429-492 4-78 (134)
114 cd06909 M14_ASPA Aspartoacylas 97.9 0.00019 4.1E-09 74.1 13.5 96 172-307 3-104 (282)
115 cd06256 M14_ASTE_ASPA_like_6 A 97.9 5.4E-05 1.2E-09 79.6 9.2 98 170-309 35-132 (327)
116 cd06240 Peptidase_M14-like_1_3 97.8 1.1E-05 2.4E-10 82.4 2.6 125 58-232 1-176 (273)
117 cd06910 M14_ASTE_ASPA_like_7 A 97.8 6.8E-05 1.5E-09 77.1 8.1 109 171-317 2-112 (272)
118 cd03855 M14_ASTE Peptidase M14 97.8 0.00029 6.2E-09 74.3 12.7 95 169-307 42-149 (322)
119 COG3608 Predicted deacylase [G 97.8 0.00058 1.3E-08 70.9 14.5 189 166-436 45-240 (331)
120 PRK05324 succinylglutamate des 97.5 0.0005 1.1E-08 72.6 10.5 95 169-307 47-153 (329)
121 PRK15036 hydroxyisourate hydro 97.4 0.0006 1.3E-08 62.4 8.3 57 429-485 28-97 (137)
122 TIGR03242 arg_catab_astE succi 97.4 0.00058 1.2E-08 71.9 8.6 102 159-307 34-148 (319)
123 PF08308 PEGA: PEGA domain; I 97.2 0.002 4.3E-08 52.0 8.0 59 443-507 11-70 (71)
124 PF07210 DUF1416: Protein of u 97.1 0.0031 6.7E-08 51.6 8.3 51 429-480 9-63 (85)
125 KOG3641|consensus 96.6 0.0024 5.2E-08 69.5 5.1 151 32-232 375-537 (650)
126 cd00421 intradiol_dioxygenase 96.4 0.0091 2E-07 55.5 7.0 46 429-474 13-79 (146)
127 COG2988 Succinylglutamate desu 96.1 0.034 7.4E-07 56.2 9.8 191 134-400 9-213 (324)
128 PF02369 Big_1: Bacterial Ig-l 95.9 0.05 1.1E-06 47.1 8.9 62 429-490 26-99 (100)
129 PF00775 Dioxygenase_C: Dioxyg 95.8 0.042 9.1E-07 53.0 8.5 47 429-475 31-98 (183)
130 cd03458 Catechol_intradiol_dio 95.7 0.038 8.2E-07 55.9 8.1 45 429-473 106-169 (256)
131 TIGR02465 chlorocat_1_2 chloro 95.5 0.046 9.9E-07 55.1 7.9 45 429-473 100-163 (246)
132 cd03462 1,2-CCD chlorocatechol 95.5 0.049 1.1E-06 54.8 8.0 45 429-473 101-164 (247)
133 TIGR02439 catechol_proteo cate 95.4 0.056 1.2E-06 55.5 8.0 46 429-474 130-194 (285)
134 cd03459 3,4-PCD Protocatechuat 95.1 0.073 1.6E-06 50.1 7.5 46 429-474 17-86 (158)
135 cd03463 3,4-PCD_alpha Protocat 95.1 0.071 1.5E-06 51.5 7.5 46 429-474 38-106 (185)
136 cd03460 1,2-CTD Catechol 1,2 d 95.1 0.072 1.6E-06 54.7 7.8 46 429-474 126-190 (282)
137 cd06233 Peptidase_M14-like_6 P 95.0 0.13 2.9E-06 52.9 9.6 118 37-197 3-126 (283)
138 PF05738 Cna_B: Cna protein B- 94.9 0.086 1.9E-06 42.1 6.3 51 442-492 1-62 (70)
139 TIGR02438 catachol_actin catec 94.8 0.091 2E-06 53.8 7.7 46 429-474 134-198 (281)
140 PF12985 DUF3869: Domain of un 94.7 0.15 3.3E-06 43.9 7.6 73 427-510 21-99 (104)
141 cd03461 1,2-HQD Hydroxyquinol 94.7 0.099 2.1E-06 53.6 7.5 46 429-474 122-186 (277)
142 PF14686 fn3_3: Polysaccharide 94.5 0.28 6.1E-06 42.1 8.9 64 429-492 4-85 (95)
143 TIGR02423 protocat_alph protoc 94.4 0.16 3.4E-06 49.5 7.8 47 429-475 41-111 (193)
144 smart00634 BID_1 Bacterial Ig- 94.3 0.18 3.8E-06 42.9 7.1 59 429-487 21-90 (92)
145 KOG1948|consensus 94.1 0.14 3E-06 58.7 7.6 63 428-491 316-381 (1165)
146 COG3485 PcaH Protocatechuate 3 94.0 0.096 2.1E-06 52.0 5.6 50 427-476 72-144 (226)
147 cd03464 3,4-PCD_beta Protocate 94.0 0.21 4.6E-06 49.5 8.0 46 429-474 67-136 (220)
148 TIGR02422 protocat_beta protoc 93.7 0.25 5.4E-06 49.0 7.9 47 429-475 62-132 (220)
149 cd06250 M14_PaAOTO_like An unc 93.5 0.12 2.5E-06 55.4 5.8 95 61-193 4-106 (359)
150 TIGR02962 hdxy_isourate hydrox 91.6 0.83 1.8E-05 40.4 7.5 55 430-484 3-71 (112)
151 PF11974 MG1: Alpha-2-macroglo 91.4 0.58 1.3E-05 40.3 6.3 50 429-478 14-69 (97)
152 PF12866 DUF3823: Protein of u 90.9 0.93 2E-05 45.1 8.0 78 427-507 21-114 (222)
153 PF09430 DUF2012: Protein of u 90.2 1.2 2.5E-05 40.2 7.3 51 442-492 7-61 (123)
154 PF10670 DUF4198: Domain of un 90.1 0.71 1.5E-05 45.2 6.5 51 429-480 152-212 (215)
155 PF10994 DUF2817: Protein of u 89.4 5.7 0.00012 42.2 12.9 117 37-194 3-123 (341)
156 PF09892 DUF2119: Uncharacteri 88.5 1.4 2.9E-05 42.3 6.6 81 170-309 7-88 (193)
157 PF10794 DUF2606: Protein of u 87.9 3.7 8.1E-05 36.2 8.4 62 430-492 44-118 (131)
158 cd06254 M14_ASTE_ASPA_like_4 A 87.4 0.86 1.9E-05 47.3 5.2 34 159-194 55-88 (288)
159 cd06251 M14_ASTE_ASPA_like_1 A 87.4 0.81 1.8E-05 47.5 5.0 31 159-193 58-88 (287)
160 COG5266 CbiK ABC-type Co2+ tra 86.4 2 4.2E-05 43.2 6.7 53 428-481 172-242 (264)
161 PF00576 Transthyretin: HIUase 85.7 0.91 2E-05 40.2 3.6 54 429-482 2-70 (112)
162 PF06488 L_lac_phage_MSP: Lact 85.2 1.7 3.6E-05 42.0 5.3 38 455-492 259-298 (301)
163 cd06255 M14_ASTE_ASPA_like_5 A 84.6 2.3 4.9E-05 44.3 6.6 29 159-191 62-91 (293)
164 KOG1948|consensus 84.2 2.6 5.6E-05 48.9 7.1 53 429-481 908-967 (1165)
165 cd03457 intradiol_dioxygenase_ 82.3 2.5 5.5E-05 41.0 5.4 46 429-474 28-100 (188)
166 cd05469 Transthyretin_like Tra 80.3 8.1 0.00018 34.2 7.4 55 430-484 3-71 (113)
167 cd05822 TLP_HIUase HIUase (5-h 79.0 3.1 6.8E-05 36.8 4.4 56 429-484 2-71 (112)
168 COG1470 Predicted membrane pro 77.5 8.3 0.00018 42.1 7.8 73 429-504 188-261 (513)
169 PF01190 Pollen_Ole_e_I: Polle 76.7 5.1 0.00011 34.2 5.0 33 438-470 17-57 (97)
170 cd05821 TLP_Transthyretin Tran 76.1 4.3 9.4E-05 36.3 4.5 56 429-484 8-77 (121)
171 cd06252 M14_ASTE_ASPA_like_2 A 75.3 5.2 0.00011 42.1 5.7 31 159-193 72-103 (316)
172 smart00095 TR_THY Transthyreti 74.9 5 0.00011 36.0 4.5 56 429-484 5-74 (121)
173 KOG3006|consensus 74.2 22 0.00048 31.5 8.1 51 429-479 22-86 (132)
174 PF03785 Peptidase_C25_C: Pept 70.0 20 0.00043 29.6 6.5 48 443-491 26-81 (81)
175 COG2351 Transthyretin-like pro 68.0 11 0.00024 33.4 5.0 55 430-484 11-79 (124)
176 cd06230 M14_ASTE_ASPA_like The 62.0 9.9 0.00021 38.5 4.3 57 159-232 37-93 (252)
177 PF11008 DUF2846: Protein of u 61.8 46 0.00099 29.4 8.0 60 442-503 40-102 (117)
178 PF07523 Big_3: Bacterial Ig-l 61.1 21 0.00045 28.1 5.1 48 429-489 18-65 (67)
179 KOG4659|consensus 59.5 29 0.00063 42.5 7.8 103 422-525 46-158 (1899)
180 PF14347 DUF4399: Domain of un 59.0 32 0.0007 28.9 6.1 52 429-483 21-74 (87)
181 TIGR02994 ectoine_eutE ectoine 58.6 19 0.00041 38.1 5.8 30 159-192 85-115 (325)
182 COG4073 Uncharacterized protei 58.3 30 0.00066 32.5 6.2 28 282-309 68-95 (198)
183 PF10577 UPF0560: Uncharacteri 57.5 21 0.00047 41.6 6.2 59 430-488 3-68 (807)
184 PF01060 DUF290: Transthyretin 56.4 15 0.00032 30.2 3.7 30 438-467 7-44 (80)
185 PF13953 PapC_C: PapC C-termin 53.8 28 0.00061 27.6 4.8 45 433-477 2-47 (68)
186 cd06253 M14_ASTE_ASPA_like_3 A 51.9 32 0.0007 35.9 6.2 32 156-192 61-93 (298)
187 PF01835 A2M_N: MG2 domain; I 46.9 1.4E+02 0.003 25.1 8.4 50 430-479 19-85 (99)
188 PF13115 YtkA: YtkA-like 45.1 77 0.0017 25.9 6.3 16 435-450 28-43 (86)
189 PF05688 DUF824: Salmonella re 44.1 28 0.00061 25.8 3.0 21 430-450 17-37 (47)
190 COG3422 Uncharacterized conser 40.5 21 0.00045 27.5 1.8 32 455-486 6-37 (59)
191 COG3608 Predicted deacylase [G 40.4 78 0.0017 33.5 6.8 25 374-399 250-275 (331)
192 PF07550 DUF1533: Protein of u 40.0 81 0.0017 24.8 5.3 20 469-488 45-64 (65)
193 PF14054 DUF4249: Domain of un 39.3 1.5E+02 0.0033 30.3 8.9 53 440-492 58-121 (298)
194 PHA02265 hypothetical protein 34.7 16 0.00034 30.2 0.5 25 575-599 64-88 (103)
195 TIGR03000 plancto_dom_1 Planct 28.4 2.2E+02 0.0048 23.3 6.1 56 443-501 11-74 (75)
196 PF07411 DUF1508: Domain of un 28.1 31 0.00067 25.6 1.1 27 459-485 1-27 (49)
197 cd06909 M14_ASPA Aspartoacylas 27.6 1.7E+02 0.0036 30.3 6.7 62 159-232 38-102 (282)
198 PF05751 FixH: FixH; InterPro 27.4 2.1E+02 0.0045 25.9 6.8 50 428-477 69-130 (146)
199 PRK13484 putative iron-regulat 27.3 39 0.00085 39.2 2.3 57 519-575 29-95 (682)
200 PRK15310 fimbrial outer membra 26.5 1.1E+02 0.0024 36.5 5.6 39 429-470 787-825 (895)
201 TIGR02867 spore_II_P stage II 24.2 4.9E+02 0.011 25.4 8.9 95 287-400 71-173 (196)
202 TIGR01779 TonB-B12 TonB-depend 23.7 51 0.0011 37.7 2.3 57 519-575 27-96 (614)
203 PF13754 Big_3_4: Bacterial Ig 23.6 1.7E+02 0.0036 22.0 4.4 27 453-479 3-32 (54)
204 PRK10641 btuB vitamin B12/coba 23.5 51 0.0011 37.7 2.3 56 519-574 24-92 (614)
205 PRK13486 bifunctional enteroba 22.0 48 0.001 38.6 1.7 56 520-575 25-93 (696)
206 COG4932 Predicted outer membra 20.2 1.1E+02 0.0023 37.9 3.9 50 435-484 1163-1221(1531)
No 1
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=100.00 E-value=2e-80 Score=654.65 Aligned_cols=359 Identities=48% Similarity=0.876 Sum_probs=330.1
Q ss_pred ccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCC---ccceeEEeCCCCCcccccCCCCCCCc
Q psy7679 117 VQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGS---CNSLARFVGRNNANGVDLNRNFPDQF 193 (608)
Q Consensus 117 ~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg---~~~~~~~~g~~ha~evdLNRNf~~~w 193 (608)
.+|.||+|++|.++|++|+++||+++++.+||+|++||+||++.++.||+. .++.+++.|++|||||.
T Consensus 2 ~~f~~h~y~ei~~~l~~l~~~~P~i~~l~~IG~S~eGR~I~~l~Is~~~~~~~~~kp~v~~~g~iHg~E~i--------- 72 (375)
T cd03863 2 VDFRHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEPGEPEFKYIGNMHGNEVV--------- 72 (375)
T ss_pred CCCccCCHHHHHHHHHHHHHHCCCcEEEEEcccCCccceEEEEEEecCCCcccCCCCeEEEEccccCCcHH---------
Confidence 357899999999999999999999999999999999999999999988753 46779999999999999
Q ss_pred CCCCcccccCCCCCCchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCCccccc
Q psy7679 194 DSSSERREQPLNVKKLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRKNAHDV 263 (608)
Q Consensus 194 ~~~~~~~~~~G~~p~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~n~~Gv 263 (608)
|.+. ++.++++|++. .+++++++| |||++||||++ +++++.|+++|.|++||
T Consensus 73 -----g~~~----------~l~li~~L~~~y~~d~~v~~ll~~~~i~---IvP~~NPDG~e~~~~~~~~~~~~R~n~~GV 134 (375)
T cd03863 73 -----GREL----------LLNLIEYLCKNFGTDPEVTDLVQSTRIH---IMPSMNPDGYEKSQEGDRGGTVGRNNSNNY 134 (375)
T ss_pred -----HHHH----------HHHHHHHHHHhccCCHHHHHHHhCCEEE---EEeccCCchHHheecCCcccccccccCCCc
Confidence 8776 77888888753 478999999 99999999965 78899999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy7679 264 DLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYA 343 (608)
Q Consensus 264 DLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a 343 (608)
|||||||++|... ...+||||+||++|+.+++|++++++||++++++|||+++..+ ...+.++||+++|+.||+.|+
T Consensus 135 DLNRNfp~~~~~~--~~~~EpEt~Av~~~~~~~~f~l~~~lHsg~~~~~yPy~~~~~~-~~~~~~~pd~~~~~~la~~~a 211 (375)
T cd03863 135 DLNRNFPDQFFQV--TDPPQPETLAVMSWLKSYPFVLSANLHGGSLVVNYPFDDDEQG-IAIYSKSPDDAVFQQLALSYS 211 (375)
T ss_pred ccccCCccccccC--CCCCcHHHHHHHHHHhhCCceEEEEecCCCEEEEccCcCCCcc-cccCCCCCCHHHHHHHHHHHH
Confidence 9999999999865 3578999999999999999999999999999999999987543 224568999999999999999
Q ss_pred HhhccccCCCCCCCC-CCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCCCCCCCcchHHHhhhhhhhhh
Q psy7679 344 NAHKKMYKDPGCPEY-PEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPAKDLPSYWEDNLPALLSY 422 (608)
Q Consensus 344 ~~~~~~~~~~~~~~~-~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~P~~~~l~~~w~~N~~alls~ 422 (608)
.+|..|+.+.+|... ..+.|..||+||+.||+++|+|+||+|.+++||+||+||+|||||++++|+.+|++||++|+.|
T Consensus 212 ~a~~~m~~~~~c~~~~~~~~~~~Gi~nga~wY~~~GgmqDw~y~~~~~~e~T~El~~~k~p~~~~l~~~w~~n~~all~~ 291 (375)
T cd03863 212 KENKKMYQGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKEEELPKYWEQNRRSLLQF 291 (375)
T ss_pred HHHHHHhcCCCCccccccccCCCCccCCceEEecCCChhhhhhhhcCeEEEEEecCcccCCCHHHHHHHHHHHHHHHHHH
Confidence 999999998889743 2456899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEEC-CCCCcccCceEEEcCceeeEEeCCCeeEEEecCCceEEEEEEecceeeEEEEEEEecCCcceEEE
Q psy7679 423 IEQVHRGVAGFVKG-REGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAIHQVSVENSTKATQLN 501 (608)
Q Consensus 423 ~eqv~~gI~G~V~D-~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~s~~GY~~~~~~v~v~~~~~~~~~~ 501 (608)
|+|++++|+|+|+| .+|+||++|+|.|+|++++++||.+|+|++.++||+|+|++|++||++++++|.|. .++.+.++
T Consensus 292 ~~~~~~gI~G~V~D~~~g~pl~~AtV~V~g~~~~~~Td~~G~f~~~l~pG~ytl~vs~~GY~~~~~~v~V~-~~~~~~~~ 370 (375)
T cd03863 292 MKQVHRGVRGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVPGTYKVTASARGYDPVTKTVEVD-SKGAVQVN 370 (375)
T ss_pred HHHhcCeEEEEEEeCCCCCCCCCeEEEEecCcCceEECCCccEEEccCCeeEEEEEEEcCcccEEEEEEEc-CCCcEEEE
Confidence 99999999999999 58999999999999999999999999999999999999999999999999999998 77888899
Q ss_pred EEEec
Q psy7679 502 ITLAR 506 (608)
Q Consensus 502 i~L~~ 506 (608)
|.|++
T Consensus 371 ~~L~~ 375 (375)
T cd03863 371 FTLSR 375 (375)
T ss_pred EEecC
Confidence 99874
No 2
>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro
Probab=100.00 E-value=9.4e-80 Score=649.25 Aligned_cols=359 Identities=38% Similarity=0.704 Sum_probs=324.1
Q ss_pred cccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCC---ccceeEEeCCCCCcccccCCCCCCCcC
Q psy7679 118 QFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGS---CNSLARFVGRNNANGVDLNRNFPDQFD 194 (608)
Q Consensus 118 ~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg---~~~~~~~~g~~ha~evdLNRNf~~~w~ 194 (608)
+|+||+|++|.++|++|++.||+++++.+||+|++||+||+++++.+|+. .++.+++.|++|||||.
T Consensus 2 ~f~yh~y~em~~~L~~la~~yP~i~~l~sIGkS~EGR~L~~l~Is~~~~~~~~~kP~v~~~g~iHgrE~i---------- 71 (405)
T cd03869 2 DFKHHNYKDMRQLMKVVNEMCPNITRIYNIGKSYQGLKLYAMEISDNPGEHELGEPEFRYVAGMHGNEVL---------- 71 (405)
T ss_pred CCccCCHHHHHHHHHHHHHHCCCceEEEEeEECcCCceEEEEEEecCCccccCCCCeEEEEcccCCCcHH----------
Confidence 57899999999999999999999999999999999999999999988865 36779999999999999
Q ss_pred CCCcccccCCCCCCchHHHHHHHHHHhcC---------CceeeceeeeeeeeeecCCCCCc--cCC---CCCCCCCCCcc
Q psy7679 195 SSSERREQPLNVKKLEPETLAMISFIKNN---------PFVLSGNLHGGAIVASYPFDDSK--CLG---DRSSMIGRKNA 260 (608)
Q Consensus 195 ~~~~~~~~~G~~p~sePEt~al~~~l~~~---------~~l~~~~~h~g~ivp~~NpDG~~--~~~---~~~~~~~R~n~ 260 (608)
|++. ++.++++|++. .+++++++| |||++||||++ ++. .++|+++|+||
T Consensus 72 ----g~~~----------~l~li~~L~~~y~~~d~~v~~Ll~~~~i~---IvP~~NPDG~e~s~~~~~~~~~Wrk~R~na 134 (405)
T cd03869 72 ----GREL----------LLLLMQFLCQEYLAGNPRVVHLVEETRIH---LLPSMNPDGYEKAYEAGSELGGWALGRWTE 134 (405)
T ss_pred ----HHHH----------HHHHHHHHHHhhhcCCHHHHHHHhcCeEE---EEeeeCCchhhhhhhcCccccccccCccCC
Confidence 8776 77888888642 588999999 99999999975 443 46899999999
Q ss_pred cccCCCCCCCC----CCC----------------CCCC-----CCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecC
Q psy7679 261 HDVDLNRNFPG----QFG----------------PSKY-----NSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPY 315 (608)
Q Consensus 261 ~GvDLNRnf~~----~w~----------------~~~~-----~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~ 315 (608)
+|||||||||. .|+ +|++ .|+|||||+||++|+++++|++++++|++..++.|||
T Consensus 135 ~GVDLNRNFp~~~~~~W~~~~~~~~~~~~~~~~~Pc~~~Y~G~~~~sEPET~Av~~~i~~~~FvLSanlHgG~lv~~YPy 214 (405)
T cd03869 135 EGIDINHNFPDLNTILWEAEDKKKVPRKVPNHHIPIPEWYLSENATVAPETRAVIAWMEKIPFVLGANLQGGELVVSYPY 214 (405)
T ss_pred CCccccCCCcccccccccccccccccccccccCCCCccccCCCCCCCcHHHHHHHHHHHhCCceEEEEecCccEEEEcCc
Confidence 99999999994 775 2332 6999999999999999999999999999999999999
Q ss_pred CCCCCCC-CCCCCCCCCHHHHHHHHHHHHHhhccccCCC--CCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEE
Q psy7679 316 DDNQAMK-PQVDSPTPDDSIFKLLASSYANAHKKMYKDP--GCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLE 392 (608)
Q Consensus 316 ~~~~~~~-~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~--~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~ 392 (608)
+++.... ...+.++||+++|+.||+.||.+|+.|+.+. +|.+. ...|.+||+|||.||++.|+|+||.|.+.+||+
T Consensus 215 d~~~~~~~~~~~~~tpDd~~Fr~LA~~Ya~~h~~M~~~~~~~c~~~-~~~~~~GitNGa~Wy~~~GgmqD~nY~~~ncfE 293 (405)
T cd03869 215 DMTRTPWATQEATPTPDDAVFRWLATSYASTHLLMTDASRRVCHTE-DFQKEDGIINGASWHTVAGSMNDFSYLHTNCFE 293 (405)
T ss_pred ccccCCccccCCCCCCCHHHHHHHHHHHHHhCHHhhcCCCCCCCCc-ccccCCCceeCCeeccCCCcccchhhhccCeEE
Confidence 9876532 3467899999999999999999999998864 58642 235689999999999999999999999999999
Q ss_pred EEEeecCCCCCCCCCcchHHHhhhhhhhhhHHHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCce
Q psy7679 393 ITLELGCYKFPPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGN 472 (608)
Q Consensus 393 ~t~El~~~~~P~~~~l~~~w~~N~~alls~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~ 472 (608)
+|+||+|+|||++++|+.+|++||++||.||+|+|.||+|+|+|.+|+||++|+|.|.|..+.++|..+|+|++.|.||+
T Consensus 294 iTlElsc~K~P~~~~L~~~W~~N~~all~~~~~vh~GikG~V~d~~g~~i~~a~i~v~g~~~~v~t~~~GdywRll~pG~ 373 (405)
T cd03869 294 LSVYLGCDKFPHESELPEEWENNKESLLVFMEQVHRGIKGVVRDKTGKGIPNAIISVEGINHDIRTASDGDYWRLLNPGE 373 (405)
T ss_pred EEEeccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcCceEEEECCCCCcCCCcEEEEecCccceeeCCCCceEEecCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecceeeEEEEEEEecCCcceEEEEEE
Q psy7679 473 YTLHVSAPGYEPAIHQVSVENSTKATQLNITL 504 (608)
Q Consensus 473 y~l~~s~~GY~~~~~~v~v~~~~~~~~~~i~L 504 (608)
|+|++++.||.+++++++|+.....+.+||.|
T Consensus 374 y~v~~~a~gy~~~~~~~~v~~~~~~~~~~f~l 405 (405)
T cd03869 374 YRVTAHAEGYTSSTKNCEVGYEMGPTQCNFTL 405 (405)
T ss_pred EEEEEEecCCCcccEEEEEcCCCCceeeccCC
Confidence 99999999999999999987322556677765
No 3
>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe
Probab=100.00 E-value=2.3e-78 Score=639.09 Aligned_cols=361 Identities=43% Similarity=0.764 Sum_probs=325.4
Q ss_pred ccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCC---ccceeEEeCCCCCcccccCCCCCCCc
Q psy7679 117 VQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGS---CNSLARFVGRNNANGVDLNRNFPDQF 193 (608)
Q Consensus 117 ~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg---~~~~~~~~g~~ha~evdLNRNf~~~w 193 (608)
|+|.||+|++|.++|++|+.+||+++++.+||+|++||+||+++++.+|+. .++.+++.|++|||||.
T Consensus 1 ~~f~Yh~y~e~~~~L~~l~~~~p~i~~l~~IG~S~eGR~I~~l~Is~~~~~~~~~kP~v~i~g~iHg~E~i--------- 71 (402)
T cd03865 1 ISFEYHRYPELREALVSVWLQCPSISRIYTVGRSFEGRELLVIEMSDNPGEHEPGEPEFKYIGNMHGNEAV--------- 71 (402)
T ss_pred CCcccCCHHHHHHHHHHHHHHCCCceEEEecccccCCCeEEEEEeecCCCCCCCCCCEEEEECCcCCCcHH---------
Confidence 367899999999999999999999999999999999999999999988764 36679999999999999
Q ss_pred CCCCcccccCCCCCCchHHHHHHHHHHhcC---------CceeeceeeeeeeeeecCCCCCc--cC---CCCCCCCCCCc
Q psy7679 194 DSSSERREQPLNVKKLEPETLAMISFIKNN---------PFVLSGNLHGGAIVASYPFDDSK--CL---GDRSSMIGRKN 259 (608)
Q Consensus 194 ~~~~~~~~~~G~~p~sePEt~al~~~l~~~---------~~l~~~~~h~g~ivp~~NpDG~~--~~---~~~~~~~~R~n 259 (608)
|++. ++.++++|++. .+++++++| |||++||||++ .+ ..+.|+++|.|
T Consensus 72 -----g~~~----------~l~l~~~L~~~y~~~d~~v~~LLd~~~i~---IvP~~NPDG~e~~~~~~~~~~~w~~~R~N 133 (402)
T cd03865 72 -----GREL----------LIYLAQYLCNEYQKGNETIINLIHSTRIH---IMPSLNPDGFEKAASQPGELKDWFVGRSN 133 (402)
T ss_pred -----HHHH----------HHHHHHHHHHhcccCCHHHHHHHhcCEEE---EEeeeCCchHHhhhhcCccccchhhhccc
Confidence 8776 78888888742 588999999 99999999975 22 23679999999
Q ss_pred ccccCCCCCCCCCCCC--------CC-------------CCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCC
Q psy7679 260 AHDVDLNRNFPGQFGP--------SK-------------YNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDN 318 (608)
Q Consensus 260 ~~GvDLNRnf~~~w~~--------~~-------------~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~ 318 (608)
|+|||||||||..+.. .+ .....||||+||++|+++++|+++++||+|+.|++||||.+
T Consensus 134 a~GvDLNRNFp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pEt~Avm~w~~~~~FvlsanlHgG~lva~YP~D~~ 213 (402)
T cd03865 134 AQGIDLNRNFPDLDRIVYVNEREGGPNNHLLKNMKKAVDENTKLAPETKAVIHWIMDIPFVLSANLHGGDLVANYPYDET 213 (402)
T ss_pred ccCcccCCCCCcccchhhhhhccCCCccccccccccccccccCCChHHHHHHHHHHhCCcEEEEEccCccEEEECCCCCC
Confidence 9999999999975321 00 01246999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHhhccccCCC--CCCCCC-CCCCCCcccccceeeeccCcccchhhhccCeEEEEE
Q psy7679 319 QAMKPQVDSPTPDDSIFKLLASSYANAHKKMYKDP--GCPEYP-EENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITL 395 (608)
Q Consensus 319 ~~~~~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~--~~~~~~-~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~ 395 (608)
..+....+.++||+++|+.||..||.+|+.|+.++ +|...+ .+.|++||+|||.||++.|+|+||.|.+.+||++|+
T Consensus 214 ~~~~~~~~s~~pDd~~f~~lA~~Ya~~h~~m~~~~~~~c~~~~~~~~f~~GitNGa~Wy~~~GgmqD~ny~~~nc~eiT~ 293 (402)
T cd03865 214 RSGSAHEYSACPDDAIFKSLARAYSSLNPAMSDPNRPPCRKNDDDSSFVDGTTNGGAWYSVPGGMQDFNYLSSNCFEITV 293 (402)
T ss_pred CCCCcccccCCCChHHHHHHHHHHHhhCHHhhcCCCCCCCCCCccccCCCCeecCceecccCCcccchhhhccCceEEEE
Confidence 65434467899999999999999999999998753 587642 568999999999999999999999999999999999
Q ss_pred eecCCCCCCCCCcchHHHhhhhhhhhhHHHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCceEEE
Q psy7679 396 ELGCYKFPPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTL 475 (608)
Q Consensus 396 El~~~~~P~~~~l~~~w~~N~~alls~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l 475 (608)
||+|||||++++|+.+|++||++|+.||+|++.||+|+|+|.+|+||++|+|.|+|++++++||.+|+|++.++||+|+|
T Consensus 294 El~c~K~P~~~~L~~~W~~n~~all~~~~q~~~gI~G~V~D~~g~pI~~AtV~V~g~~~~~~T~~~G~Y~~~L~pG~Ytv 373 (402)
T cd03865 294 ELSCDKFPPEETLKQYWEDNKNSLVNYIEQVHRGVKGFVKDLQGNPIANATISVEGIDHDITSAKDGDYWRLLAPGNYKL 373 (402)
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHHHHHhccceEEEEECCCCCcCCCeEEEEEcCccccEECCCeeEEECCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999899999999
Q ss_pred EEEecceeeEEEEEEEecCCcceEEEEEEe
Q psy7679 476 HVSAPGYEPAIHQVSVENSTKATQLNITLA 505 (608)
Q Consensus 476 ~~s~~GY~~~~~~v~v~~~~~~~~~~i~L~ 505 (608)
++++.||+++++.|+|. .++.+.++|.|+
T Consensus 374 ~vsa~Gy~~~~~~V~V~-~~~~~~vdf~Le 402 (402)
T cd03865 374 TASAPGYLAVVKKVAVP-YSPAVRVDFELE 402 (402)
T ss_pred EEEecCcccEEEEEEEc-CCCcEEEeEEeC
Confidence 99999999999999998 677888999885
No 4
>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu
Probab=100.00 E-value=8.8e-78 Score=637.20 Aligned_cols=353 Identities=45% Similarity=0.767 Sum_probs=319.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCc---cceeEEeCCCCCcccccCCCCCCCcCCCC
Q psy7679 121 HHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSC---NSLARFVGRNNANGVDLNRNFPDQFDSSS 197 (608)
Q Consensus 121 y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~---~~~~~~~g~~ha~evdLNRNf~~~w~~~~ 197 (608)
||+|++|.++|++|++.||+++++.+||+|++||+||+++++.+|+.. ++.+++.|++||+|+.
T Consensus 1 ~h~y~em~~~L~~l~~~yP~i~~l~sIG~SveGR~i~~l~is~~~~~~~~~kp~v~~~g~iHg~E~i------------- 67 (392)
T cd03864 1 HHRYDDLVRALYAVQNECPYITRIYSIGRSVEGRHLYVLEFSDNPGIHEPLEPEFKYVGNMHGNEVL------------- 67 (392)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEEeeeccCCceEEEEEecCCCccccCCCCEEEEEcccCCCcHH-------------
Confidence 689999999999999999999999999999999999999999887543 6779999999999999
Q ss_pred cccccCCCCCCchHHHHHHHHHHhcC---------CceeeceeeeeeeeeecCCCCCc--cCCCC---CCCCCCCccccc
Q psy7679 198 ERREQPLNVKKLEPETLAMISFIKNN---------PFVLSGNLHGGAIVASYPFDDSK--CLGDR---SSMIGRKNAHDV 263 (608)
Q Consensus 198 ~~~~~~G~~p~sePEt~al~~~l~~~---------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~---~~~~~R~n~~Gv 263 (608)
|++. ++.++++|++. .+++++++| |||++||||++ .+.++ .|..+|.|++||
T Consensus 68 -g~e~----------ll~l~~~L~~~y~~~d~~v~~lL~~~~i~---ivP~~NPDG~e~~~~~~~~~~~~~~~R~Na~GV 133 (392)
T cd03864 68 -GREL----------LIQLSEFLCEEYRNGNERITRLIQDTRIH---ILPSMNPDGYEVAARQGPEFNGYLVGRNNANGV 133 (392)
T ss_pred -HHHH----------HHHHHHHHHHhcccCCHHHHHHHhcCeEE---EEeeeCCchHHhhhccCCCcCccccccccccCc
Confidence 8876 77888888742 478999999 99999999975 33222 245689999999
Q ss_pred CCCCCCCCCCC---------------CCCC--CCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCC----
Q psy7679 264 DLNRNFPGQFG---------------PSKY--NSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMK---- 322 (608)
Q Consensus 264 DLNRnf~~~w~---------------~~~~--~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~---- 322 (608)
|||||||..|. |+++ .+++||||+||++|+++++|++++++|+++.+++|||+++..+.
T Consensus 134 DLNRNFp~~~~~~~~~~~~~g~~~~~P~~~~~~~~~epET~Av~~~~~~~~fvls~nlHgG~~v~~YPyd~~~~~~~~~~ 213 (392)
T cd03864 134 DLNRNFPDLNTLMYYNEKYGGPNHHLPLPDNWKSQVEPETLAVIQWMQNYNFVLSANLHGGAVVANYPYDKSREPRVRGF 213 (392)
T ss_pred ccccCCCcccccchhhhccCCccccCCCccccccccCHHHHHHHHHHHhcCcEEEEEccCCceeeeCCcccccccccccc
Confidence 99999997642 2222 47899999999999999999999999999999999999876531
Q ss_pred -CCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCC
Q psy7679 323 -PQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYK 401 (608)
Q Consensus 323 -~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~ 401 (608)
...+.++||+++|+.||..||.+|+.|+.+.+|. +.|.+||+|||.||++.|+|+||.|.+.+||++|+||+|||
T Consensus 214 ~~~~~~~tpDd~~f~~la~~ya~~h~~m~~~~~c~----~~f~~gitnGa~wy~~~GgmqD~~Y~~~nc~e~t~el~c~k 289 (392)
T cd03864 214 RRTAYSPTPDDKLFQKLAKTYSYAHGWMHKGWNCG----DYFDEGITNGASWYSLSKGMQDFNYLHTNCFEITLELSCDK 289 (392)
T ss_pred cccccCCCCChHHHHHHHHHHHHhCCcccCCCCCc----ccCCCCcccCceeEecCCCchhhhhhccCeeEEEEeccccC
Confidence 2457899999999999999999999999988894 57999999999999999999999999999999999999999
Q ss_pred CCCCCCcchHHHhhhhhhhhhHHHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCceEEEEEEecc
Q psy7679 402 FPPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPG 481 (608)
Q Consensus 402 ~P~~~~l~~~w~~N~~alls~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~s~~G 481 (608)
||++++|+.+|++||++|+.||+|++.+|+|+|+|.+|+||++|+|.|+|++++++||.+|+|++.++||+|+|++|+.|
T Consensus 290 ~p~~~~l~~~w~~n~~all~~~~~~~~gI~G~V~D~~g~pi~~A~V~v~g~~~~~~T~~~G~y~r~l~pG~Y~l~vs~~G 369 (392)
T cd03864 290 FPPEEELEREWLGNREALISYIEQVHQGIKGMVTDENNNGIANAVISVSGISHDVTSGTLGDYFRLLLPGTYTVTASAPG 369 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCCCCccCCeEEEEECCccceEECCCCcEEecCCCeeEEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999987899999999999999
Q ss_pred eeeEEEEEEEecCCcceEEEEEEe
Q psy7679 482 YEPAIHQVSVENSTKATQLNITLA 505 (608)
Q Consensus 482 Y~~~~~~v~v~~~~~~~~~~i~L~ 505 (608)
|++++++|+|. .++.+.++|+|+
T Consensus 370 y~~~t~~v~V~-~~~~~~~df~L~ 392 (392)
T cd03864 370 YQPSTVTVTVG-PAEATLVNFQLK 392 (392)
T ss_pred ceeEEEEEEEc-CCCcEEEeeEeC
Confidence 99999999998 666677888874
No 5
>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a
Probab=100.00 E-value=1.6e-75 Score=616.39 Aligned_cols=348 Identities=34% Similarity=0.546 Sum_probs=318.3
Q ss_pred cCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCC---ccceeEEeCCCCCcccccCCCCCCCcCCC
Q psy7679 120 SHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGS---CNSLARFVGRNNANGVDLNRNFPDQFDSS 196 (608)
Q Consensus 120 ~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg---~~~~~~~~g~~ha~evdLNRNf~~~w~~~ 196 (608)
+||+|++|.++|++|++.||+++++.+||+|++||+|+++.++.+++. .++.+++.|++|||||.
T Consensus 1 ~Yh~y~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~l~~l~Is~~~~~~~~~kp~v~~~~giHg~E~i------------ 68 (363)
T cd06245 1 RYHHYKELSEFLRGLTLNYPHITNLTSLGQSVEFRPILSLEISNKPNNSEPEEPKIRFVAGIHGNAPV------------ 68 (363)
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCceEEEEEecCCCCCCCCCCCEEEEECCccCCcHH------------
Confidence 489999999999999999999999999999999999999999987643 36779999999999999
Q ss_pred CcccccCCCCCCchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCCcccccCCC
Q psy7679 197 SERREQPLNVKKLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRKNAHDVDLN 266 (608)
Q Consensus 197 ~~~~~~~G~~p~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~n~~GvDLN 266 (608)
|++. ++.++++|+.. .+++++++| |||++||||++ ++.++.+..+|.||+|||||
T Consensus 69 --g~e~----------~l~l~~~L~~~y~~d~~v~~ll~~~~i~---ivP~~NPDG~e~~~~~~~~~~~~r~na~GvDLN 133 (363)
T cd06245 69 --GTEL----------LLALAEFLCMNYGKNPAVTKLIDRTRIV---IVPSLNPDGREKAQEKQCTSKEGHTNAHGKDLD 133 (363)
T ss_pred --HHHH----------HHHHHHHHHHHccCCHHHHHHHhCCEEE---EEeccCCchHHHeecCCCcccCCCCCcccccCC
Confidence 8776 78888888652 488999999 99999999976 55553334568899999999
Q ss_pred CCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhh
Q psy7679 267 RNFPGQFGPSKYNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAH 346 (608)
Q Consensus 267 Rnf~~~w~~~~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a~~~ 346 (608)
||||..|... .|+|||||+||++|+.+++|++++++|+|+++++|||+++. ..+||+++|+.||+.||.+|
T Consensus 134 RNf~~~~~g~--~~~sepEt~Av~~~~~~~~f~l~~~lH~~~~~~~yPy~~~~-------~~~pd~~~~~~la~~~a~ah 204 (363)
T cd06245 134 TDFTSNASNM--SADVQPETKAIIDNLISKDFTLSVALDGGSVVATYPYDKPV-------QTVENKETLKHLAKVYANNH 204 (363)
T ss_pred CCCCcccCCC--CCCCcHHHHHHHHHHHhCCceEEEEEcCCcEEEEecCCCCC-------cCCCCHHHHHHHHHHHHHhC
Confidence 9999888643 68999999999999999999999999999999999999874 35899999999999999999
Q ss_pred ccccCCC-CCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCCCCCCCcchHHHhhhhhhhhhHHH
Q psy7679 347 KKMYKDP-GCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPAKDLPSYWEDNLPALLSYIEQ 425 (608)
Q Consensus 347 ~~~~~~~-~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~P~~~~l~~~w~~N~~alls~~eq 425 (608)
+.|+.+. .|+..+.+.|++||+||+.||++.|+|+||.|.+.+||++|+|++|||||++++|+.+|++||++|+.||++
T Consensus 205 ~~m~~~~~~c~~~~~~~~~~Gitnga~wy~~~g~mqd~~y~~~~~~e~t~e~~~~k~P~~~~l~~~w~~n~~all~~~~~ 284 (363)
T cd06245 205 PTMHLGQPGCPNNSDENIPGGVMRGAEWNSHLGSMKDFSVDFGHCPEITVYTSCCLFPSASQLPDLWAENKKSLLSMIVE 284 (363)
T ss_pred hhhhcCCCCCCCCcccccCCCccccceeecccCCcchhhhhhcCCceeEEEeccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9998875 587655678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCceEEEEEEecceeeEEEEEEEecCCcceEEEEEEe
Q psy7679 426 VHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAIHQVSVENSTKATQLNITLA 505 (608)
Q Consensus 426 v~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~s~~GY~~~~~~v~v~~~~~~~~~~i~L~ 505 (608)
++.||+|+|+|.+|+||++|+|.|+|+. +++||.+|.|++.++||+|+|++++.||++++++|++. .++.+.++|.|.
T Consensus 285 ~~~gI~G~V~d~~g~pi~~A~V~v~g~~-~~~T~~~G~y~~~L~pG~y~v~vs~~Gy~~~~~~V~v~-~~~~~~~~f~L~ 362 (363)
T cd06245 285 AHKGVHGVVTDKAGKPISGATIVLNGGH-RVYTKEGGYFHVLLAPGQHNINVIAEGYQQEHLPVVVS-HDEASSVKIVLD 362 (363)
T ss_pred cCcEEEEEEEcCCCCCccceEEEEeCCC-ceEeCCCcEEEEecCCceEEEEEEEeCceeEEEEEEEc-CCCeEEEEEEec
Confidence 9999999999999999999999999987 89999999999889999999999999999999999998 677778899886
No 6
>KOG2649|consensus
Probab=100.00 E-value=1.6e-75 Score=606.78 Aligned_cols=365 Identities=47% Similarity=0.813 Sum_probs=339.3
Q ss_pred ccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce---eEEeCCCCCcccccCCCCCCCc
Q psy7679 117 VQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL---ARFVGRNNANGVDLNRNFPDQF 193 (608)
Q Consensus 117 ~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~---~~~~g~~ha~evdLNRNf~~~w 193 (608)
+++.||+|++|..+|+++..+||+++++++||+|++||++|+++++.+|+.++++ +.+.|++||+|+.
T Consensus 65 l~f~hh~y~~m~~~l~~~~~~~p~itrlYSiGkSv~Gr~L~Vle~sd~PgeH~~gePEfKyv~nmHGnE~v--------- 135 (500)
T KOG2649|consen 65 LTFGHHNYDDLEKALKDFTKRCPNITRLYSIGKSVEGRELWVIEISDRPGEHEPGEPEFKYIGNMHGNEVV--------- 135 (500)
T ss_pred ccCCCCCHHHHHHHHHHHHhhCCcceeeeeccccccCceEEEEEcCCCCCcccCCCCcceeeeeccccccc---------
Confidence 7788999999999999999999999999999999999999999999999988765 8999999999999
Q ss_pred CCCCcccccCCCCCCchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCCccccc
Q psy7679 194 DSSSERREQPLNVKKLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRKNAHDV 263 (608)
Q Consensus 194 ~~~~~~~~~~G~~p~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~n~~Gv 263 (608)
|+++ .+.+++|+|.. .++.++++| |||.+|||||+ ..+++.|-.||+|++||
T Consensus 136 -----GREl----------ll~L~e~Lc~~y~~n~~i~~Lv~~trIH---lmPSmNPDGyE~a~~~~~~~~~GR~Nang~ 197 (500)
T KOG2649|consen 136 -----GREL----------LLRLAEYLCDNYGKDPRITQLVNNTRIH---IMPSMNPDGYEIAKRGDRGWATGRNNANGV 197 (500)
T ss_pred -----cHHH----------HHHHHHHHHHhcCCChHHHHHHhhceEE---EecccCcchhhhhhcccccceecccCcccc
Confidence 9998 88899999875 589999999 99999999987 56899999999999999
Q ss_pred CCCCCCCCCCCCCC-----------------CCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCCCCCC
Q psy7679 264 DLNRNFPGQFGPSK-----------------YNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMKPQVD 326 (608)
Q Consensus 264 DLNRnf~~~w~~~~-----------------~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~ 326 (608)
|||||||..+.... +....+|||+||+.|+.+++|++++++|++..+++|||+..... ...+
T Consensus 198 DLNrnFPd~~~~~~~~~~~~~~n~~l~~~~~~~~~~~pEt~Avm~W~~~~pFvLSAnLHGG~lvanYPfD~~~~~-~~~~ 276 (500)
T KOG2649|consen 198 DLNRNFPDQFRLVYFIVTFDLLNSHLIMFNDDLNLRQPETIAVMKWLRDIPFVLSANLHGGALVANYPFDDTEDK-RKYY 276 (500)
T ss_pred chhccCcccccceeeeeeecccccccccccccccccCccHHHHHHHHhhcceeeeccccCCceEEEccccCCccc-cccc
Confidence 99999998766421 13478999999999999999999999999999999999998765 3677
Q ss_pred CCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCCCCCC
Q psy7679 327 SPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPAK 406 (608)
Q Consensus 327 ~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~P~~~ 406 (608)
.++||+++|+.||..||.+|..|+.+..|.......+.+||+|||.||++.|+|+||.|.+.+||++||||+|+|||+++
T Consensus 277 s~tpDd~~F~~La~~YA~~h~~M~~~~~~~~~~~~~~~~GItNGA~Wy~v~GgMqDfnYLhTNCfEiTiElgC~KfP~e~ 356 (500)
T KOG2649|consen 277 SASPDDATFRFLARIYAKSHRNMSLGKRCECDGNNGSVGGITNGASWYPVYGGMQDWNYLHTNCFEITLELSCEKFPKES 356 (500)
T ss_pred CCCCCcHHHHHHHHHHHhhChhhhcCCCCcccccCCCcCceecCcceeecCCcccchhhhhcCeEEEEEEeccccCCchh
Confidence 89999999999999999999999998887664333334899999999999999999999999999999999999999999
Q ss_pred CcchHHHhhhhhhhhhHHHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCceEEEEEEecceeeEE
Q psy7679 407 DLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAI 486 (608)
Q Consensus 407 ~l~~~w~~N~~alls~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~s~~GY~~~~ 486 (608)
+|+.+|++||++|+.|+||+|+||+|.|+|.+|+||++|+|+|.|.++.++|..+|+||+.++||.|.|++++.||.+.+
T Consensus 357 eLp~~WE~Nr~sLl~f~eqvH~GIkG~V~D~~G~~I~NA~IsV~ginHdv~T~~~GDYWRLL~PG~y~vta~A~Gy~~~t 436 (500)
T KOG2649|consen 357 ELPTLWEYNRKSLLNFVEQVHRGIKGLVFDDTGNPIANATISVDGINHDVTTAKEGDYWRLLPPGKYIITASAEGYDPVT 436 (500)
T ss_pred hhHHHHHhhHHHHHHHHHHHHhccceeEEcCCCCccCceEEEEecCcCceeecCCCceEEeeCCcceEEEEecCCCccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCcceEEEEEEeccccc
Q psy7679 487 HQVSVENSTKATQLNITLARINLI 510 (608)
Q Consensus 487 ~~v~v~~~~~~~~~~i~L~~~~~~ 510 (608)
++|+|+ ......+||.|++...+
T Consensus 437 k~v~V~-~~~a~~~df~L~~~~~~ 459 (500)
T KOG2649|consen 437 KTVTVP-PDRAARVNFTLQRSIPQ 459 (500)
T ss_pred eEEEeC-CCCccceeEEEecCCCc
Confidence 999998 46677899999988776
No 7
>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont
Probab=100.00 E-value=1.2e-72 Score=597.80 Aligned_cols=344 Identities=44% Similarity=0.757 Sum_probs=313.0
Q ss_pred cccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCC---ccceeEEeCCCCCcccccCCCCCCCcC
Q psy7679 118 QFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGS---CNSLARFVGRNNANGVDLNRNFPDQFD 194 (608)
Q Consensus 118 ~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg---~~~~~~~~g~~ha~evdLNRNf~~~w~ 194 (608)
+++||++++|.++|++|++.||+++++.+||+|++||+|++++++.+|.. .++.+++.|++|||||.
T Consensus 2 ~~~Y~~~~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~i~~l~ig~~~~~~~~~~P~v~~~~~iHg~E~i---------- 71 (376)
T cd03866 2 DFNYHNTEQMEAYLKDVNKNYPSITHLHSIGQSVEGRELWVLVLGRFPREHRIGIPEFKYVANMHGNEVV---------- 71 (376)
T ss_pred CcccCCHHHHHHHHHHHHHhCCCcEEEEEeeccCCCceEEEEEeccCCccccCCCCeEEEEcccCCCcHH----------
Confidence 46899999999999999999999999999999999999999999876643 35679999999999999
Q ss_pred CCCcccccCCCCCCchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc-cCCCCCCCCCCCcccccCC
Q psy7679 195 SSSERREQPLNVKKLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK-CLGDRSSMIGRKNAHDVDL 265 (608)
Q Consensus 195 ~~~~~~~~~G~~p~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~-~~~~~~~~~~R~n~~GvDL 265 (608)
|.+. ++.++++|+.. .+++++++| |+|++||||++ ...++.|+++|.||+||||
T Consensus 72 ----g~~~----------~l~l~~~L~~~y~~d~~i~~lL~~~~i~---ivP~~NPDG~e~~~~~~~~~~~R~N~~GvDL 134 (376)
T cd03866 72 ----GREL----------LLHLIDYLVTSYGSDPVITRLLNSTRIH---IMPSMNPDGFEASKPDCYYSVGRYNKNGYDL 134 (376)
T ss_pred ----HHHH----------HHHHHHHHHHhcCCCHHHHHHHhCCEEE---EEeccCCchhhhcccccccccccccCCCccc
Confidence 8776 77788877652 488999999 99999999976 3478999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCC--CCCCCCCCCHHHHHHHHHHHH
Q psy7679 266 NRNFPGQFGPSKYNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMK--PQVDSPTPDDSIFKLLASSYA 343 (608)
Q Consensus 266 NRnf~~~w~~~~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~--~~~~~~~~d~~~~~~la~~~a 343 (608)
|||||++|...+ ..|||||+||++|+++++|++++++|+++++++|||+++.... ......+||+.+|+.||+.|+
T Consensus 135 NRnf~~~w~~~~--~~sepEt~al~~~~~~~~~~l~~~~H~~~~~~~YP~~~~~~~~~~~~~~~~~pd~~~~~~la~~~a 212 (376)
T cd03866 135 NRNFPDAFEENN--EQRQPETRAVMEWLKSETFVLSANLHGGALVASYPYDNGNGGTGQQGYRSVSPDDDVFVHLAKTYS 212 (376)
T ss_pred CcCchhhhccCC--CCCcHHHHHHHHHHHhcCcEEEEEccCCceEEeccccCCCCccccccCCCCCCCHHHHHHHHHHHH
Confidence 999999998764 4599999999999999999999999999999999999864311 012456899999999999999
Q ss_pred HhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCCCCCCCcchHHHhhhhhhhhhH
Q psy7679 344 NAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPAKDLPSYWEDNLPALLSYI 423 (608)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~P~~~~l~~~w~~N~~alls~~ 423 (608)
++|..|+.+..|.. ...|..||+||+.||+++|+|+||+|.+++||+||+||+|+|||+.++|+.+|++|+++|+.++
T Consensus 213 ~~~~~~~~g~~~~~--~~~~~~Gi~nga~~Y~~sG~~~Dw~y~~~~~~~~T~El~~~k~p~~~~l~~~w~~n~~~ll~~i 290 (376)
T cd03866 213 YNHANMYKGNHCSD--KQSFPSGITNGYQWYPLQGGMQDYNYVWAQCFEITLELSCCKYPPEEQLPAFWEDNKAALIEYI 290 (376)
T ss_pred HhCHHhhCCCCCCc--cccCCCCcccceEEEEcCCCchhhhhhhCceEEEEEEecCCCCCCHHHHHHHHHHhHHHHHHHH
Confidence 99999998778864 4689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEECCCCCcccCceEEEcCcee--eEEeCCCeeEEEecCCceEEEEEEecceeeEEEEEEEe
Q psy7679 424 EQVHRGVAGFVKGREGEGVAGASIAVEGLGH--VVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAIHQVSVE 492 (608)
Q Consensus 424 eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~--~~~Td~~G~f~~~l~~g~y~l~~s~~GY~~~~~~v~v~ 492 (608)
++++.||+|+|+|.+|+||++|+|.|.|+.. .++||.+|.|++.++||+|+|++++.||++++++|.+.
T Consensus 291 ~q~~~gI~G~V~D~~g~pi~~A~V~v~g~~~~~~~~T~~~G~y~~~l~pG~Y~v~vsa~Gy~~~~~~v~v~ 361 (376)
T cd03866 291 KQVHLGVKGQVFDSNGNPIPNAIVEVKGRKHICPYRTNVNGEYFLLLLPGKYMINVTAPGFKTVITNVIIP 361 (376)
T ss_pred HHhcCceEEEEECCCCCccCCeEEEEEcCCceeEEEECCCceEEEecCCeeEEEEEEeCCcceEEEEEEeC
Confidence 9999999999999999999999999999875 45899999998889999999999999999999998886
No 8
>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.
Probab=100.00 E-value=1.8e-71 Score=593.70 Aligned_cols=355 Identities=40% Similarity=0.753 Sum_probs=315.0
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCC---ccceeEEeCCCCCcccccCCCCCCCcCCCC
Q psy7679 121 HHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGS---CNSLARFVGRNNANGVDLNRNFPDQFDSSS 197 (608)
Q Consensus 121 y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg---~~~~~~~~g~~ha~evdLNRNf~~~w~~~~ 197 (608)
||+|++|.++|++|++.||+++++.+||+|++||+|+++.++.+|+. .++.+++.|++|||||.
T Consensus 1 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~EGR~i~~l~is~~~~~~~~~kp~v~i~~giHg~E~i------------- 67 (395)
T cd03867 1 HHSYSQMVSVLKRTAARCSHIARTYSIGRSFEGRDLLVIEFSSNPGQHELLEPEVKYIGNMHGNEVL------------- 67 (395)
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEccccCCCceEEEEEeccCCCcccccCCeEEEEccccCCcHH-------------
Confidence 78999999999999999999999999999999999999999887654 36789999999999999
Q ss_pred cccccCCCCCCchHHHHHHHHHHhcC---------CceeeceeeeeeeeeecCCCCCc--cCCC---CCCCCCCCccccc
Q psy7679 198 ERREQPLNVKKLEPETLAMISFIKNN---------PFVLSGNLHGGAIVASYPFDDSK--CLGD---RSSMIGRKNAHDV 263 (608)
Q Consensus 198 ~~~~~~G~~p~sePEt~al~~~l~~~---------~~l~~~~~h~g~ivp~~NpDG~~--~~~~---~~~~~~R~n~~Gv 263 (608)
|.+. ++.++++|++. .+++++++| |||++||||++ ++.+ ++|+++|.||+||
T Consensus 68 -g~~~----------~~~l~~~L~~~~~~~d~~v~~ll~~~~i~---ivP~~NPDG~e~~~~~~~~~~~wr~~R~n~~Gv 133 (395)
T cd03867 68 -GREL----------LIYLAQFLCSEYLLGNQRIQTLINTTRIH---LLPSMNPDGYEAAASEGAGYNGWTNGRQNAQNI 133 (395)
T ss_pred -HHHH----------HHHHHHHHHHhhhcCCHHHHHHhhCcEEE---EEeccCCchHHhhhhcCccccccccCCcCCCCc
Confidence 8665 66677776542 488999999 99999999976 4444 5799999999999
Q ss_pred CCCCCCCCCCCC----------------CCC---CCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCC-C
Q psy7679 264 DLNRNFPGQFGP----------------SKY---NSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMK-P 323 (608)
Q Consensus 264 DLNRnf~~~w~~----------------~~~---~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~-~ 323 (608)
|||||||+.|.. |++ +++|||||+||++|+.+++|+++++|||++++++|||+++.+.. .
T Consensus 134 DLNRNf~~~~~~~~~~~~~~g~~~~~~p~p~~~~~~~sepEt~Av~~~~~~~~~~l~~s~Hs~~~~~~yP~~~t~~~~~~ 213 (395)
T cd03867 134 DLNRNFPDLTSEVYRRRRQRGARTDHIPIPDSYWFGKVAPETKAVMKWMRSIPFVLSASLHGGDLVVSYPYDFSRHPLEE 213 (395)
T ss_pred ccccCCCcchhhhcchhhcccccccCCCCccccccCccCHHHHHHHHHHhhCCceEEEEccCcceeEEcccccccCcccc
Confidence 999999999852 322 35799999999999999999999999999999999999875421 2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhccccCCC--CCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCC
Q psy7679 324 QVDSPTPDDSIFKLLASSYANAHKKMYKDP--GCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYK 401 (608)
Q Consensus 324 ~~~~~~~d~~~~~~la~~~a~~~~~~~~~~--~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~ 401 (608)
..+.++||+++|+.||+.|+++|..|+.+. .|.. ...+.+||++|+.||+++|+|+||+|.+++|++||+||+|++
T Consensus 214 ~~~~~~~d~~~~~~lA~~~a~a~~~~~~~~~~~~~~--~~~~~g~i~~ga~~Y~~sG~~~Dw~y~~~~~~~~T~EL~~~~ 291 (395)
T cd03867 214 KMFSPTPDEKVFKMLARTYADAHPTMSDRSTRRCGG--NFHKRGGIINGAEWYSFSGGMSDFNYLHTNCFEVTVELGCDK 291 (395)
T ss_pred cccCCCCcHHHHHHHHHHHHHhCccccCCCCCCCcc--ccccCCCceecceeeEcCCCcchhhhhccCceEEEEEecCCC
Confidence 345689999999999999999999998654 4643 345689999999999999999999999999999999999999
Q ss_pred CCCCCCcchHHHhhhhhhhhhHHHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCceEEEEEEecc
Q psy7679 402 FPPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPG 481 (608)
Q Consensus 402 ~P~~~~l~~~w~~N~~alls~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~s~~G 481 (608)
|||.++|+++|++|+++|+.++++++.+|+|+|+|++|+||++|+|.|+|++.+++||.+|.|++.+++|+|+|++++.|
T Consensus 292 ~pp~~~i~~~~~e~~~~l~~~~~~~~~~i~G~V~D~~g~pi~~A~V~v~g~~~~~~Td~~G~y~~~l~~G~y~l~vs~~G 371 (395)
T cd03867 292 FPPEEELYTIWQENKEALLSFMEMVHRGIKGFVKDKDGNPIKGARISVRGIRHDITTAEDGDYWRLLPPGIHIVSAQAPG 371 (395)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhccceeEEEEEcCCCCccCCeEEEEeccccceEECCCceEEEecCCCcEEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred eeeEEEEEEEec-CCcceEEEEEE
Q psy7679 482 YEPAIHQVSVEN-STKATQLNITL 504 (608)
Q Consensus 482 Y~~~~~~v~v~~-~~~~~~~~i~L 504 (608)
|++++++|++.+ .+....+||+|
T Consensus 372 y~~~~~~v~v~~~~~~~~~~d~~l 395 (395)
T cd03867 372 YTKVMKRVTLPARMKRAGRVDFVL 395 (395)
T ss_pred eeeEEEEEEeCCcCCCceEeeeEC
Confidence 999999998862 24556777765
No 9
>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p
Probab=100.00 E-value=4.1e-70 Score=581.43 Aligned_cols=354 Identities=46% Similarity=0.804 Sum_probs=318.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCC---ccceeEEeCCCCCcccccCCCCCCCcCCCC
Q psy7679 121 HHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGS---CNSLARFVGRNNANGVDLNRNFPDQFDSSS 197 (608)
Q Consensus 121 y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg---~~~~~~~~g~~ha~evdLNRNf~~~w~~~~ 197 (608)
||+|++|.++|++|+++||+++++.+||+|++||+|++++++.+++. .++.+++.|++|||||.
T Consensus 1 Y~~y~ei~~~l~~l~~~~p~~~~l~~iG~S~eGR~i~~l~is~~~~~~~~~kp~v~~~~~iH~~E~i------------- 67 (372)
T cd03868 1 YHHYEELTDLLHSLAKKYPNIARLHSIGRSVEGRELWVLRITDNVNRREPGEPMFKYVGNMHGDETV------------- 67 (372)
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEeccccCCCceEEEEEEecCCCCCCCCCCeEEEECCcCCCcHH-------------
Confidence 78999999999999999999999999999999999999999876542 36779999999999999
Q ss_pred cccccCCCCCCchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc--cCCC--CCCCCCCCcccccCC
Q psy7679 198 ERREQPLNVKKLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK--CLGD--RSSMIGRKNAHDVDL 265 (608)
Q Consensus 198 ~~~~~~G~~p~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~--~~~~--~~~~~~R~n~~GvDL 265 (608)
|.+. ++.+++.|++. .+++.+++| |||++||||+. ++++ +.|+++|.||+||||
T Consensus 68 -g~~~----------~l~l~~~L~~~y~~d~~~~~ll~~~~~~---ivP~~NPDG~~~~~~~~~~~~~~~~R~n~~GvDL 133 (372)
T cd03868 68 -GRQV----------LIYLAQYLLENYGGDERVTELVNTTDIY---LMPSMNPDGFERSQEGDCSCGGYGGRENANNVDL 133 (372)
T ss_pred -HHHH----------HHHHHHHHHHhcccCHHHHHHHhCCEEE---EEeeeCCchHHhhcccCccccCCCccCCCCCccC
Confidence 8766 77788777653 488999999 99999999975 5566 789999999999999
Q ss_pred CCCCCCCCCCCC-CCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCC-CCCCCCCCCHHHHHHHHHHHH
Q psy7679 266 NRNFPGQFGPSK-YNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMK-PQVDSPTPDDSIFKLLASSYA 343 (608)
Q Consensus 266 NRnf~~~w~~~~-~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~-~~~~~~~~d~~~~~~la~~~a 343 (608)
|||||++|+..+ ..++|||||+||++|+++++|++++++|+++++++|||+++.... ...+.++||++.|+.||+.++
T Consensus 134 NRnf~~~~~~~~~~~~~sepEt~av~~~~~~~~~~l~~~lH~~~~~~~yP~~~~~~~~~~~~~~~~pd~~~~~~la~~~a 213 (372)
T cd03868 134 NRNFPDQFEGKLQRLSERQPETVAMMKWIRSNPFVLSGNLHGGSVVASYPYDDSSSHNECGVYSKSPDDAVFKYLALTYA 213 (372)
T ss_pred CCCCCcccCCcCCCCCCCCHHHHHHHHHHhhCCcEEEEEccCccEEEeccccccCCCCCCcccCCCCCHHHHHHHHHHHH
Confidence 999999998643 379999999999999999999999999999999999999865421 233567999999999999999
Q ss_pred HhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCCCCCCCcchHHHhhhhhhhhhH
Q psy7679 344 NAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPAKDLPSYWEDNLPALLSYI 423 (608)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~P~~~~l~~~w~~N~~alls~~ 423 (608)
++|..|..+.+|+. +..|..|+++|+.||+++|+++||+|.+++|++||+||+|+|||+.++|+.+|++|+++|+.++
T Consensus 214 ~~~~~~~~~~~~~~--~~~~~~G~~~~~~~Y~~~G~~~Dw~y~~~~~~~~T~El~~~~~p~~~~l~~~w~~n~~al~~~~ 291 (372)
T cd03868 214 NNHPTMRTGKPCCE--GETFKDGITNGAHWYDVPGGMQDYNYLHSNCFEITLELSCCKYPPASELPEEWNNNRESLLAYL 291 (372)
T ss_pred hhCHHhhCCCCCCc--cccCCCCcccCceeeeCCCCcchhhhhccCeeEEEEEecCCCCCCHHHHHHHHHHhHHHHHHHH
Confidence 99999877655322 5789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCceEEEEEEecceeeEEEE-EEEecCCcceEEEE
Q psy7679 424 EQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAIHQ-VSVENSTKATQLNI 502 (608)
Q Consensus 424 eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~s~~GY~~~~~~-v~v~~~~~~~~~~i 502 (608)
++++.+|+|+|+|.+|+||++|+|.|.++.++++||.+|.|++.+++|+|+|++++.||++++++ +.+. .++.+.++|
T Consensus 292 ~~~~~~i~G~V~d~~g~pv~~A~V~v~~~~~~~~td~~G~y~~~l~~G~Y~l~vs~~Gf~~~~~~~v~v~-~g~~~~~~~ 370 (372)
T cd03868 292 EQVHIGVKGFVRDASGNPIEDATIMVAGIDHNVTTAKFGDYWRLLLPGTYTITAVAPGYEPSTVTDVVVK-EGEATSVNF 370 (372)
T ss_pred HHhCCceEEEEEcCCCCcCCCcEEEEEecccceEeCCCceEEecCCCEEEEEEEEecCCCceEEeeEEEc-CCCeEEEee
Confidence 99999999999999999999999999999999999999999877899999999999999999887 4566 677777787
Q ss_pred EE
Q psy7679 503 TL 504 (608)
Q Consensus 503 ~L 504 (608)
.|
T Consensus 371 ~L 372 (372)
T cd03868 371 TL 372 (372)
T ss_pred EC
Confidence 65
No 10
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr
Probab=100.00 E-value=1.8e-66 Score=555.34 Aligned_cols=357 Identities=51% Similarity=0.891 Sum_probs=322.0
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCC---CccceeEEeCCCCCcccccCCCCCCCcCCCC
Q psy7679 121 HHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEG---SCNSLARFVGRNNANGVDLNRNFPDQFDSSS 197 (608)
Q Consensus 121 y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npd---g~~~~~~~~g~~ha~evdLNRNf~~~w~~~~ 197 (608)
||+|+++.++|++|+..||+++++..||+|++||+|++++++.++. ..++.+++.+++||+|+.
T Consensus 1 Y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~agiH~~E~~------------- 67 (374)
T cd03858 1 YHNYAELESFLKEVAANYPNITRLYSIGKSVQGRDLWVLEISDNPGVHEPGEPEFKYVGNMHGNEVV------------- 67 (374)
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccCCCCCEEEEEEEecCCCCCCCCCceEEEeccccCCchh-------------
Confidence 7899999999999999999999999999999999999999987653 246779999999999999
Q ss_pred cccccCCCCCCchHHHHHHHHHHhcC---------CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCCcccccCCC
Q psy7679 198 ERREQPLNVKKLEPETLAMISFIKNN---------PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRKNAHDVDLN 266 (608)
Q Consensus 198 ~~~~~~G~~p~sePEt~al~~~l~~~---------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~n~~GvDLN 266 (608)
|.+. ++.+++.|+.. .+++.++++ |||++||||+. +++++.|+++|.|++|||||
T Consensus 68 -g~~~----------~~~l~~~L~~~~~~~d~~~~~ll~~~~~~---ivP~~NPDG~~~~~~~~~~w~~~R~n~~GvDLN 133 (374)
T cd03858 68 -GREL----------LLRLAQYLCENYGAGDPRITRLVDNTRIH---IMPSMNPDGYEKAAEGDCGGLTGRYNANGVDLN 133 (374)
T ss_pred -HHHH----------HHHHHHHHHHHhccCCHHHHHHHhCCEEE---EEcccCCchhhhhcccCCcccccCCCCcceecc
Confidence 8766 67777776642 488899999 99999999965 67899999999999999999
Q ss_pred CCCCCCCCCC---CCCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q psy7679 267 RNFPGQFGPS---KYNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYA 343 (608)
Q Consensus 267 Rnf~~~w~~~---~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a 343 (608)
||||+.|... +..||||||||||++|+.+++|.+++|+|+++++++|||++++........++||.++++.||+.++
T Consensus 134 Rnf~~~~~~~~~~G~~~~sepEt~al~~~~~~~~~~~~i~~Hs~~~~~~yp~~~~~~~~~~~~~~~~d~~~~~~la~~~a 213 (374)
T cd03858 134 RNFPDLFFTNYRSSDNGPRQPETKAVMNWIKSIPFVLSANLHGGALVANYPYDDSPSGKRTAYSATPDDELFRYLAKTYA 213 (374)
T ss_pred cCCCcccccccccCCCcccCHHHHHHHHHHhhCCceEEEEccCCceEEEcccccCCCccccCCCCCCCHHHHHHHHHHHH
Confidence 9999999864 3479999999999999999999999999999999999999974311123567999999999999999
Q ss_pred HhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCCCCCCCcchHHHhhhhhhhhhH
Q psy7679 344 NAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPAKDLPSYWEDNLPALLSYI 423 (608)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~P~~~~l~~~w~~N~~alls~~ 423 (608)
+++..|+..+.|++.....|+.|+++++.||+++|+++||+|..+++++||+||+|+++||.++++.+|.+|+++++.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~y~~G~~~~~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~p~~~~i~~i~~en~~all~l~ 293 (374)
T cd03858 214 DAHPTMHKGGPCCCNDDEEFPGGITNGAAWYSVTGGMQDWNYLHTNCFEITLELSCCKFPPASELPKYWEENREALLAYI 293 (374)
T ss_pred HhCHHhcCCCCCCCcccccCCCCcEEcceeeEcCCCchhhhhhccCceEEEEeccCCCCCChhHhHHHHHHHHHHHHHHH
Confidence 99999988766654446689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCceEEEEEEecceeeEEEEEEEecCCcceEEEEE
Q psy7679 424 EQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAIHQVSVENSTKATQLNIT 503 (608)
Q Consensus 424 eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~s~~GY~~~~~~v~v~~~~~~~~~~i~ 503 (608)
++++.+|+|+|+|.+|+||++|+|.|.|+..+++||.+|.|.+.+++|+|+|.+++.||+++++++.+...++..++++.
T Consensus 294 ~~a~~~i~G~V~d~~g~pl~~A~V~i~~~~~~~~Td~~G~f~~~l~~G~y~l~vs~~Gy~~~~~~v~v~~~g~~~~~~~~ 373 (374)
T cd03858 294 EQVHRGIKGFVRDANGNPIANATISVEGINHDVTTAEDGDYWRLLLPGTYNVTASAPGYEPQTKSVVVPNDNSAVVVDFT 373 (374)
T ss_pred hhcCCceEEEEECCCCCccCCeEEEEecceeeeEECCCceEEEecCCEeEEEEEEEcCcceEEEEEEEecCCceEEEeeE
Confidence 99999999999999999999999999999999999999999988899999999999999999999888722677777776
Q ss_pred E
Q psy7679 504 L 504 (608)
Q Consensus 504 L 504 (608)
|
T Consensus 374 l 374 (374)
T cd03858 374 L 374 (374)
T ss_pred C
Confidence 5
No 11
>KOG2650|consensus
Probab=100.00 E-value=3.8e-51 Score=430.77 Aligned_cols=270 Identities=25% Similarity=0.279 Sum_probs=225.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC---Ccceeeeec--cceEEEecCCCCcccc
Q psy7679 30 FLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT---NKNKVSIIS--LYRLVTVSTTPAPIEE 104 (608)
Q Consensus 30 ~~~~~~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~---~~~~v~~~~--hare~~~~~~~~~~~~ 104 (608)
.+.|.+||+++||.+||+.|+.+||+++++..||+|+|||+|.+|+||++ .|+.|++++ ||||||+|+++.++++
T Consensus 115 ~~~~~~Y~~le~I~~~l~~l~~~~P~~v~~~~IG~s~EgR~i~~lkIs~~~~~~k~~I~id~GiHAREWIspAta~~~i~ 194 (418)
T KOG2650|consen 115 DFNWERYHSLEEIYEWLDNLAERYPDLVSLIHIGRSYEGRPLKVLKISGGDNRNKKAIFIDAGIHAREWISPATALWFIN 194 (418)
T ss_pred cccHHHhcCHHHHHHHHHHHHHhCCCceEEEEcccccCCceEEEEEecCCCCCCCceEEEecchhHHhhccHHHHHHHHH
Confidence 58889999999999999999999999999999999999999999999863 467899998 9999999999888766
Q ss_pred ccccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccc
Q psy7679 105 DIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVD 184 (608)
Q Consensus 105 ~l~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evd 184 (608)
+|+. .|...
T Consensus 195 qLv~-----------~y~~~------------------------------------------------------------ 203 (418)
T KOG2650|consen 195 QLVS-----------SYGRD------------------------------------------------------------ 203 (418)
T ss_pred HHHh-----------hhccC------------------------------------------------------------
Confidence 6543 00000
Q ss_pred cCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCC----
Q psy7679 185 LNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRK---- 258 (608)
Q Consensus 185 LNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~---- 258 (608)
|+.+ .+++.++|+ |+|++|||||+ ++.+|+|||+|.
T Consensus 204 --------------------------~~~~---------~ll~~~dwy---I~Pv~NPDGYeYS~t~~R~WRKnRs~~~~ 245 (418)
T KOG2650|consen 204 --------------------------PAVT---------KLLDKLDWY---ILPVVNPDGYEYSRTTDRLWRKNRSPNGC 245 (418)
T ss_pred --------------------------HHHH---------HHHhcCcEE---EEeeecCCcceeeecccccccccCCCCCC
Confidence 1122 255678899 99999999965 889999999986
Q ss_pred --cccccCCCCCCCCCCCC--------CC-----CCCCCcHHHHHHHHHHHhCC--cEEEEEEcccceeeeecCCCCCCC
Q psy7679 259 --NAHDVDLNRNFPGQFGP--------SK-----YNSVPEPETLAVEKWLQDIP--FVLSANLHGGSLVANYPYDDNQAM 321 (608)
Q Consensus 259 --n~~GvDLNRnf~~~w~~--------~~-----~~~~sepEt~ai~~~~~~~~--~~~~~~~Hs~~~~i~yP~~~~~~~ 321 (608)
.|.||||||||+++|+. |+ +.|||||||+||.+|+.++. +.+++++||||++++|||+++.+
T Consensus 246 ~~~C~GvDlNRNfd~~W~~~~Gas~~PCse~Y~G~~pfSEpEt~av~~fi~~~~~~i~~yislHSYsQ~llyPyg~~~~- 324 (418)
T KOG2650|consen 246 ASRCIGVDLNRNFDFHWGGGKGASSDPCSETYAGPSPFSEPETRAVRDFITSFENNIKAYISLHSYSQLLLYPYGYTND- 324 (418)
T ss_pred CCeeeCCCCCCCccCcCCCCCCCCCCCCccccCCCCCCCcHHHHHHHHHHHhcCcceEEEEEecccceeEEecccccCC-
Confidence 28999999999999985 43 39999999999999999875 58999999999999999999864
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhh-ccCeEEEEEeecCC
Q psy7679 322 KPQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYI-HANTLEITLELGCY 400 (608)
Q Consensus 322 ~~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~-~~~~~~~t~El~~~ 400 (608)
.++|.+.++.+|+.++++....++ ..|..|.+ +..+|+++|++.||+|. .+.+++||+||++.
T Consensus 325 ------~~~~~~dl~~va~~a~~ai~~~~g---------t~Y~~G~~-~~~~y~asG~S~Dway~~~gi~~~ft~ELrd~ 388 (418)
T KOG2650|consen 325 ------LPEDYEDLQEVARAAADALKSVYG---------TKYTVGSS-ADTLYPASGGSDDWAYDVLGIPYAFTFELRDT 388 (418)
T ss_pred ------CCCCHHHHHHHHHHHHHHHHHHhC---------CEEEeccc-cceeeccCCchHHHhhhccCCCEEEEEEeccC
Confidence 459999999999999998877632 24455533 35789999999999996 89999999999965
Q ss_pred ---CC-CCCCCcchHHHhhhhhhhhhHHH
Q psy7679 401 ---KF-PPAKDLPSYWEDNLPALLSYIEQ 425 (608)
Q Consensus 401 ---~~-P~~~~l~~~w~~N~~alls~~eq 425 (608)
+| +|+.+|.+..++-..++..++++
T Consensus 389 g~~GF~LP~~~I~pt~~Et~~~i~~i~~~ 417 (418)
T KOG2650|consen 389 GRYGFLLPASQIIPTAKETWAGIKAIAEK 417 (418)
T ss_pred CCCCccCChHHhhhhHHHHHHHHHHHHhh
Confidence 35 78888888878777777666653
No 12
>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p
Probab=100.00 E-value=7.3e-50 Score=411.82 Aligned_cols=270 Identities=23% Similarity=0.302 Sum_probs=216.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC--Ccceeeeec--cceEEEecCCCCcccccc
Q psy7679 31 LENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT--NKNKVSIIS--LYRLVTVSTTPAPIEEDI 106 (608)
Q Consensus 31 ~~~~~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~--~~~~v~~~~--hare~~~~~~~~~~~~~l 106 (608)
++|.+||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||++ .|+.+++.+ |||||+++..
T Consensus 1 ~~~~~Y~~~~ei~~~l~~L~~~~p~~v~~~~iG~S~eGR~I~~l~is~~~~~kp~v~i~~giHarE~i~~~~-------- 72 (301)
T cd03870 1 FNYATYHTLDEIYDFMDLLVAEHPNLVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDAGIHSREWITQAT-------- 72 (301)
T ss_pred CCccccCCHHHHHHHHHHHHHHCCCceEEEecccCCCCCeEEEEEEecCCCCCceEEEeccccccchhhHHH--------
Confidence 4688999999999999999999999999999999999999999999854 345566655 6777764322
Q ss_pred ccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccC
Q psy7679 107 KKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLN 186 (608)
Q Consensus 107 ~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLN 186 (608)
+..+++.|+..+ ..+
T Consensus 73 --------------------~l~~~~~L~~~~-----------------------~~d---------------------- 87 (301)
T cd03870 73 --------------------GVWFAKKITEDY-----------------------GQD---------------------- 87 (301)
T ss_pred --------------------HHHHHHHHHHhc-----------------------ccC----------------------
Confidence 223333332111 000
Q ss_pred CCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCC-----c
Q psy7679 187 RNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRK-----N 259 (608)
Q Consensus 187 RNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~-----n 259 (608)
|+.+ .++++++++ |||++||||+. ++.+++|||+|. +
T Consensus 88 ------------------------~~~~---------~lLd~~~i~---ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~ 131 (301)
T cd03870 88 ------------------------PSFT---------AILDSMDIF---LEIVTNPDGYVFTHSQNRLWRKTRSVTSGSL 131 (301)
T ss_pred ------------------------HHHH---------HHHHhCcEE---EEeeecCchhhheecccceeecCCCCCCCCC
Confidence 1111 367899999 99999999965 677999999987 6
Q ss_pred ccccCCCCCCCCCCC-------CCC-----CCCCCcHHHHHHHHHHHhC-CcEEEEEEcccceeeeecCCCCCCCCCCCC
Q psy7679 260 AHDVDLNRNFPGQFG-------PSK-----YNSVPEPETLAVEKWLQDI-PFVLSANLHGGSLVANYPYDDNQAMKPQVD 326 (608)
Q Consensus 260 ~~GvDLNRnf~~~w~-------~~~-----~~~~sepEt~ai~~~~~~~-~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~ 326 (608)
|+||||||||+++|+ +|+ ..||||||||||++|+.++ ++.+++++||+|++|+|||+++..
T Consensus 132 ~~GVDLNRNf~~~w~~~g~s~~p~~~~Y~G~~pfSEpEt~av~~~~~~~~~~~~~l~lHS~g~~i~yP~~~~~~------ 205 (301)
T cd03870 132 CVGVDPNRNWDAGFGGAGASSNPCSETYHGPYANSEVEVKSIVDFVKSHGNFKAFISIHSYSQLLLYPYGYTTQ------ 205 (301)
T ss_pred ccccccccCCCcccCcCCCCCCCCccccCCCCCCccHHHHHHHHHHhhCCCeEEEEEeccCCceEEecCcCCCC------
Confidence 999999999999997 343 3899999999999999987 478999999999999999999753
Q ss_pred CCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCC---CC-
Q psy7679 327 SPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCY---KF- 402 (608)
Q Consensus 327 ~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~---~~- 402 (608)
.+||.+.++.||+.+++++...+. ..|+.|.+. ..||+++|+++||+|..+++++||+||+|+ +|
T Consensus 206 -~~~~~~~~~~la~~~~~ai~~~~g---------~~y~~g~~~-~~~y~a~G~s~Dw~y~~~~~~s~t~El~~~g~~gF~ 274 (301)
T cd03870 206 -SIPDKTELNQVAKSAVAALKSLYG---------TSYKYGSII-TTIYQASGGSIDWSYNQGIKYSFTFELRDTGRYGFL 274 (301)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHhcC---------Ccccccccc-ceeecCCCChhhhhhcCCCcEEEEEEeCCCCCCCCC
Confidence 577999999999999888776532 234445443 468999999999999999999999999986 34
Q ss_pred CCCCCcchHHHhhhhhhhhhHHHh
Q psy7679 403 PPAKDLPSYWEDNLPALLSYIEQV 426 (608)
Q Consensus 403 P~~~~l~~~w~~N~~alls~~eqv 426 (608)
+|.+++.+.-++....+..+++++
T Consensus 275 lP~~~i~p~~~E~~~~i~~~~~~~ 298 (301)
T cd03870 275 LPASQIIPTAQETWLGLLTIMEHT 298 (301)
T ss_pred CChHHCchhhHHHHHHHHHHHHHH
Confidence 888888888888888888877654
No 13
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=100.00 E-value=5.1e-50 Score=412.39 Aligned_cols=269 Identities=17% Similarity=0.219 Sum_probs=215.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC--Ccceeeeec--cceEEEecCCCCcccccc
Q psy7679 31 LENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT--NKNKVSIIS--LYRLVTVSTTPAPIEEDI 106 (608)
Q Consensus 31 ~~~~~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~--~~~~v~~~~--hare~~~~~~~~~~~~~l 106 (608)
++|.+||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||+. .|+.+++++ |||||++++.
T Consensus 1 ~~~~~Y~~~~ei~~~l~~la~~~p~~v~~~~IG~S~eGR~i~~l~i~~~~~~kp~v~i~~giHarE~i~~~~-------- 72 (300)
T cd03871 1 HSYEKYNNWETIEAWTEQVASENPDLISRSQIGTTFEGRPIYLLKVGKPGVNKPAIFMDCGFHAREWISPAF-------- 72 (300)
T ss_pred CCccccCCHHHHHHHHHHHHHHCCCceEEEEeeeCCCCCeeEEEEEccCCCCCCeEEEeccccccccccHHH--------
Confidence 4688999999999999999999999999999999999999999999864 356777776 7888885432
Q ss_pred ccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccC
Q psy7679 107 KKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLN 186 (608)
Q Consensus 107 ~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLN 186 (608)
+..++++|+..| .. +
T Consensus 73 --------------------~l~~i~~l~~~y-----------------------~~--------------------d-- 87 (300)
T cd03871 73 --------------------CQWFVREAVRTY-----------------------GR--------------------E-- 87 (300)
T ss_pred --------------------HHHHHHHHHHHc-----------------------cC--------------------C--
Confidence 233334442111 00 0
Q ss_pred CCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCC-----c
Q psy7679 187 RNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRK-----N 259 (608)
Q Consensus 187 RNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~-----n 259 (608)
++.+ .+++++++| |||++||||++ ++.+++|||+|. +
T Consensus 88 ------------------------~~~~---------~lL~~~~~~---ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~ 131 (300)
T cd03871 88 ------------------------AIMT---------ELLDKLDFY---VLPVLNIDGYIYTWTKNRMWRKTRSTNAGSS 131 (300)
T ss_pred ------------------------HHHH---------HHHHcCeEE---EEEeecCCcCeeeeccCHHHHHhcCCCCCCC
Confidence 1122 356789999 99999999965 788999999886 3
Q ss_pred ccccCCCCCCCCCCCC-------CC-----CCCCCcHHHHHHHHHHHhCC--cEEEEEEcccceeeeecCCCCCCCCCCC
Q psy7679 260 AHDVDLNRNFPGQFGP-------SK-----YNSVPEPETLAVEKWLQDIP--FVLSANLHGGSLVANYPYDDNQAMKPQV 325 (608)
Q Consensus 260 ~~GvDLNRnf~~~w~~-------~~-----~~~~sepEt~ai~~~~~~~~--~~~~~~~Hs~~~~i~yP~~~~~~~~~~~ 325 (608)
|.|||||||||++|+. |. ..||||||||||++|+.+.+ +.+++++||+|++++|||+++..
T Consensus 132 c~GVDLNRNf~~~w~~~g~s~~pc~~~Y~G~~p~SEpEt~Al~~~~~~~~~~~~~~l~~HSyg~~i~~Py~~~~~----- 206 (300)
T cd03871 132 CIGTDPNRNFNAGWCTVGASRNPCDETYCGSAPESEKETKALADFIRNNLSSIKAYLTIHSYSQMLLYPYSYTYK----- 206 (300)
T ss_pred ccccccCcCCCCccCCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHhcCcceeEEEEeccCccEEEecCcCCCC-----
Confidence 7899999999999963 43 38999999999999999975 57899999999999999998743
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCC---CC
Q psy7679 326 DSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCY---KF 402 (608)
Q Consensus 326 ~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~---~~ 402 (608)
.++|.+.++.||+.+++++..++. ..| ..|.. ++.||+++|+++||+|..+++++||+||+|. +|
T Consensus 207 --~~~~~~~~~~la~~~~~ai~~~~g-~~y--------~~g~~-~~~~Y~a~G~s~Dw~y~~~~~~s~t~El~~~g~~gf 274 (300)
T cd03871 207 --LPENHAELNSVAKGAVKELASLYG-TKY--------TYGPG-ATTIYPAAGGSDDWAYDQGIKYSFTFELRDKGRYGF 274 (300)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHhhC-CCC--------cCCcc-ccccccCCCCHHHHHhcCCCcEEEEEEeCCCCCCCC
Confidence 578999999999998888776542 222 23322 3579999999999999999999999999885 45
Q ss_pred -CCCCCcchHHHhhhhhhhhhHHH
Q psy7679 403 -PPAKDLPSYWEDNLPALLSYIEQ 425 (608)
Q Consensus 403 -P~~~~l~~~w~~N~~alls~~eq 425 (608)
+|.++|.+.+++....+..+.++
T Consensus 275 ~lp~~~I~~~~~E~~~~i~~~~~~ 298 (300)
T cd03871 275 LLPESQIKPTCEETMLAVKYIANY 298 (300)
T ss_pred CCCHHHCccccHHHHHHHHHHHHh
Confidence 68899999999998888776654
No 14
>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil
Probab=100.00 E-value=3.3e-48 Score=399.76 Aligned_cols=262 Identities=20% Similarity=0.245 Sum_probs=224.2
Q ss_pred cCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcc
Q psy7679 120 SHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSER 199 (608)
Q Consensus 120 ~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~ 199 (608)
.||+++++.++|++|++.||+++++.+||+|++||+|++++++.+++..++.+|+.+++|||||. +
T Consensus 4 ~Y~~~~ei~~~l~~l~~~~p~~v~~~~iG~S~egR~I~~l~is~~~~~~k~~v~i~~giHarE~i--------------~ 69 (300)
T cd06246 4 QYHSLNEIYSWIEFITERHSDMLEKIHIGSSFEKRPLYVLKVSGKEQTAKNAIWIDCGIHAREWI--------------S 69 (300)
T ss_pred ccCCHHHHHHHHHHHHHHCCCcEEEEecccCCCCCeEEEEEEeCCCCCCCCeEEEecccCccchh--------------h
Confidence 59999999999999999999999999999999999999999987766668889999999999999 7
Q ss_pred cccCCCCCCchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCC-----cccccC
Q psy7679 200 REQPLNVKKLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRK-----NAHDVD 264 (608)
Q Consensus 200 ~~~~G~~p~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~-----n~~GvD 264 (608)
.+. ++.+++.|+.. .++++++++ |||++||||+. ++.+++|||+|. +|.|||
T Consensus 70 ~~~----------~l~~i~~Ll~~~~~d~~~~~lL~~~~i~---ivP~~NPDG~~~~~~~~r~wRknr~~~~~~~~~GVD 136 (300)
T cd06246 70 PAF----------CLWFVGHATQFYGIDGQMTNLLRHMDFY---IMPVMNVDGYDYTWKKNRMWRKNRSFYANSHCIGTD 136 (300)
T ss_pred HHH----------HHHHHHHHHHHhcCCHHHHHHHHhCeEE---EEEeecCCceeEEEeccceeecCCCCCCCCCccCcc
Confidence 665 66666666542 588999999 99999999965 678999999985 699999
Q ss_pred CCCCCCCCCCC-------CC-----CCCCCcHHHHHHHHHHHhCC--cEEEEEEcccceeeeecCCCCCCCCCCCCCCCC
Q psy7679 265 LNRNFPGQFGP-------SK-----YNSVPEPETLAVEKWLQDIP--FVLSANLHGGSLVANYPYDDNQAMKPQVDSPTP 330 (608)
Q Consensus 265 LNRnf~~~w~~-------~~-----~~~~sepEt~ai~~~~~~~~--~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~ 330 (608)
||||||++|+. |+ ..|||||||+||++|+++++ +.+++++||++++++|||+++.. +++
T Consensus 137 LNRNf~~~w~~~g~s~~p~~~~y~G~~p~SEpEt~av~~~~~~~~~~i~~~is~Hs~g~~i~~P~~~~~~-------~~~ 209 (300)
T cd06246 137 LNRNFDAKWCCEGASSSSCSETYCGPYPESEPEVKAVASFLRRHINQIKAYISMHSYSQMILFPYSYTRS-------KSK 209 (300)
T ss_pred cccccccccCCCCCCCCCCCCCcCCCCCCccHHHHHHHHHHHhCCcceeEEEEeccCCcEEEeccccCCC-------CCC
Confidence 99999999963 33 28999999999999999986 56899999999999999999743 578
Q ss_pred CHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCC---CC-CCCC
Q psy7679 331 DDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCY---KF-PPAK 406 (608)
Q Consensus 331 d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~---~~-P~~~ 406 (608)
|.+.++.||+.++++....+. ..|..|.+. ..+|+++|+++||+|..+++++||+||+|+ +| +|.+
T Consensus 210 ~~~~~~~la~~~~~ai~~~~~---------~~y~~g~~~-~~~Y~a~G~s~Dw~y~~~~~~s~t~El~~~g~~gF~lp~~ 279 (300)
T cd06246 210 DHEELSLLAKEAVRAIRRTSN---------NRYTHGSGA-ETIYLAPGGSDDWAYDLGIKYSFTFELRDTGTYGFLLPES 279 (300)
T ss_pred CHHHHHHHHHHHHHHHHHhhC---------CCCeecCCC-CeeeccCCChhhHhhcCCCCEEEEEEecCCCCCCCCCCHH
Confidence 999999999998887665432 234444332 358999999999999999999999999986 45 8889
Q ss_pred CcchHHHhhhhhhhhhHHH
Q psy7679 407 DLPSYWEDNLPALLSYIEQ 425 (608)
Q Consensus 407 ~l~~~w~~N~~alls~~eq 425 (608)
+|.+..+|...++..++++
T Consensus 280 ~I~p~~~E~~~~~~~~~~~ 298 (300)
T cd06246 280 YIKPTCSEALAAVKKIAWH 298 (300)
T ss_pred HcccccHHHHHHHHHHHHh
Confidence 9999988888888777654
No 15
>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3.4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.
Probab=100.00 E-value=7.9e-48 Score=395.35 Aligned_cols=262 Identities=20% Similarity=0.222 Sum_probs=224.7
Q ss_pred cCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcc
Q psy7679 120 SHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSER 199 (608)
Q Consensus 120 ~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~ 199 (608)
.||+++++.++|++|++.||+++++.+||+|++||+|+++.++.+.+..++.+|+.|++|||||+ +
T Consensus 3 ~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EgR~I~~l~i~~~~~~~k~~i~i~~giHarEwi--------------~ 68 (298)
T cd06247 3 KYHPMDEIYNWMDQIKEKYSELVSQHYLGCTYELRPMYYLKIGWPSDKPKKIIWMDCGIHAREWI--------------S 68 (298)
T ss_pred CcCCHHHHHHHHHHHHHHCCCcEEEEeceECcCCceEEEEEeecCCCCCCcEEEEeccccccccc--------------c
Confidence 59999999999999999999999999999999999999999986555556789999999999999 7
Q ss_pred cccCCCCCCchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCC-----cccccC
Q psy7679 200 REQPLNVKKLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRK-----NAHDVD 264 (608)
Q Consensus 200 ~~~~G~~p~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~-----n~~GvD 264 (608)
.+. ++.+++.|+.. .++++++++ |||++||||+. ++.+++|||+|. +|.|||
T Consensus 69 ~~~----------~l~~i~~Ll~~y~~d~~~~~ll~~~~i~---ivP~~NPDGy~ys~~~~r~wRknr~~~~~~~c~GVD 135 (298)
T cd06247 69 PAF----------CQWFVKEILQNYKTDPILRKVLKNVDFY---VLPVLNIDGYIYTWTTDRLWRKNRSPHNNGTCYGVD 135 (298)
T ss_pred HHH----------HHHHHHHHHHHhccCHHHHHHHhcCeEE---EEeeecCCcceEEecccceecccCCCCCCCCccccc
Confidence 665 66666666542 488999999 99999999976 678999999986 689999
Q ss_pred CCCCCCCCCCC-------CC-----CCCCCcHHHHHHHHHHHhCCc--EEEEEEcccceeeeecCCCCCCCCCCCCCCCC
Q psy7679 265 LNRNFPGQFGP-------SK-----YNSVPEPETLAVEKWLQDIPF--VLSANLHGGSLVANYPYDDNQAMKPQVDSPTP 330 (608)
Q Consensus 265 LNRnf~~~w~~-------~~-----~~~~sepEt~ai~~~~~~~~~--~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~ 330 (608)
|||||+++|+. |+ ..|||||||+||++|++++++ .+++++||+|++++|||+++.. +++
T Consensus 136 LNRNf~~~w~~~g~s~~p~~~~y~G~~pfSEpEt~ai~~~~~~~~~~i~~~l~~Hsyg~~i~~P~g~~~~-------~~~ 208 (298)
T cd06247 136 LNRNFNSQWCSIGASRNCRSNIFCGTGPESEPETKAVARLIESKKSDILCYLTIHSYGQLILLPYGYTKE-------PSS 208 (298)
T ss_pred cccCCCCccccCCCCCCCCCCCcCCCCCCCcHHHHHHHHHHHhcCcceEEEEEeccCCCeEEeCCcCCCC-------CCC
Confidence 99999999974 33 279999999999999999874 4699999999999999999753 578
Q ss_pred CHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCC---CC-CCCC
Q psy7679 331 DDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCY---KF-PPAK 406 (608)
Q Consensus 331 d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~---~~-P~~~ 406 (608)
|.+.++.||+.++++....+. ..|..|.+. ..+|+++|++.||+|..+++++||+||++. +| ||.+
T Consensus 209 n~~~~~~~a~~~~~ai~~~~~---------~~y~~g~~~-~~~y~a~G~s~Dwa~~~~~~~s~t~El~~~g~~gF~lp~~ 278 (298)
T cd06247 209 NHEEMMLVAQKAAAALKEKHG---------TEYRVGSSA-LILYSNSGSSRDWAVDIGIPFSYTFELRDNGTYGFVLPED 278 (298)
T ss_pred CHHHHHHHHHHHHHHHHHhcC---------CCCccCCcc-cccccCCCChhhhhhccCCCEEEEEEeCCCCCCCCCCChH
Confidence 999999999998887765432 345556553 468999999999999989999999999985 45 8999
Q ss_pred CcchHHHhhhhhhhhhHHH
Q psy7679 407 DLPSYWEDNLPALLSYIEQ 425 (608)
Q Consensus 407 ~l~~~w~~N~~alls~~eq 425 (608)
+|.+..+|...++..+++.
T Consensus 279 ~I~p~~~E~~~~i~~~~~~ 297 (298)
T cd06247 279 QIQPTCEETMTAVMSMVEY 297 (298)
T ss_pred HCcchhHHHHHHHHHHHhh
Confidence 9999999999988877654
No 16
>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse
Probab=100.00 E-value=1.2e-46 Score=386.46 Aligned_cols=262 Identities=20% Similarity=0.223 Sum_probs=222.4
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCccc
Q psy7679 121 HHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERR 200 (608)
Q Consensus 121 y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~ 200 (608)
||+++++.++|+.|++.+|+++++.+||+|++||+|++++++.+.+..++.+++.|++|||||+ +.
T Consensus 2 Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EGR~i~~l~i~~~~~~~k~~i~i~~giHarEwi--------------~~ 67 (300)
T cd03872 2 YHPLEEIESWMFYMNKTHSDLVHLFSIGKSYEGRSLYVLKLGKRTRSYKKAVWIDCGIHAREWI--------------GP 67 (300)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEEecCCCCCCCeEEEeccccccccc--------------CH
Confidence 8999999999999999999999999999999999999999987766667889999999999999 86
Q ss_pred ccCCCCCCchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCC-----cccccCC
Q psy7679 201 EQPLNVKKLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRK-----NAHDVDL 265 (608)
Q Consensus 201 ~~~G~~p~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~-----n~~GvDL 265 (608)
+. ++.+++.+... .++++++++ |||++||||+. ++.+++|||+|. +|.||||
T Consensus 68 ~~----------~~~~i~~Ll~~~~~d~~~~~lL~~~~~~---ivP~vNPDGy~ys~~~~r~wrknR~~~~~~~c~GVDL 134 (300)
T cd03872 68 AF----------CQWFVKEALNSYQTDPAMKKMLNQLYFY---VMPVFNVDGYHYSWTNDRFWRKTRSKNSRYQCRGVDA 134 (300)
T ss_pred HH----------HHHHHHHHHHhccCChHHHHHHhhCeEE---EEeeecCCcceeeeccchhhhccCCCCCCCCcccccc
Confidence 65 56666555431 488999999 99999999965 788999999976 5899999
Q ss_pred CCCCCCCCCC-------CC-----CCCCCcHHHHHHHHHHHhCC--cEEEEEEcccceeeeecCCCCCCCCCCCCCCCCC
Q psy7679 266 NRNFPGQFGP-------SK-----YNSVPEPETLAVEKWLQDIP--FVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPD 331 (608)
Q Consensus 266 NRnf~~~w~~-------~~-----~~~~sepEt~ai~~~~~~~~--~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d 331 (608)
||||+++|+. |+ ..|||||||+||++|+.++. +.+++|+||++++++|||+++.. ++|+
T Consensus 135 NRNf~~~w~~~g~s~~Pcs~~Y~G~~pfSEpEt~al~~~~~~~~~~i~~~ls~Hsyg~~i~~P~g~~~~-------~~~~ 207 (300)
T cd03872 135 NRNWKVKWCDEGASLHPCDDTYCGPFPESEPEVKAVAQFLRKHRKHVRAYLSFHAYAQMLLYPYSYKYA-------TIPN 207 (300)
T ss_pred ccccCcccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCccceEEEEEccCCcEEEecCCCcCC-------CCCC
Confidence 9999999963 43 28999999999999999974 68899999999999999999743 4678
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCC---C-CCCCC
Q psy7679 332 DSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYK---F-PPAKD 407 (608)
Q Consensus 332 ~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~---~-P~~~~ 407 (608)
.+.++.+|..++++....+. ..|..|... ..+|.++|++.||+|..+.+++||+||++.+ | +|.++
T Consensus 208 ~~~~~~~~~~~~~ai~~~~~---------~~Y~~g~~~-~~lY~a~G~s~Dw~y~~~i~~s~t~EL~~~g~~gF~lp~~~ 277 (300)
T cd03872 208 FGCVESAAYNAVNALQSAYG---------VRYRYGPAS-STLYVSSGSSMDWAYKNGIPYAFAFELRDTGYYGFLLPEGL 277 (300)
T ss_pred hHHHHHHHHHHHHHHHHhhC---------CCCcccCcc-cceecCCCCHHHHhhcCCCcEEEEEEeCCCCCCCCcCCHHH
Confidence 88888998888777655432 234444432 3579999999999998888899999999863 4 88899
Q ss_pred cchHHHhhhhhhhhhHHHh
Q psy7679 408 LPSYWEDNLPALLSYIEQV 426 (608)
Q Consensus 408 l~~~w~~N~~alls~~eqv 426 (608)
|.+..+|...++..++.++
T Consensus 278 I~p~~~E~~~~i~~~~~~~ 296 (300)
T cd03872 278 IKPTCTETMLAVKNITMHL 296 (300)
T ss_pred CCcccHHHHHHHHHHHHHH
Confidence 9999999999888887654
No 17
>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.
Probab=100.00 E-value=1.6e-46 Score=388.40 Aligned_cols=252 Identities=25% Similarity=0.372 Sum_probs=217.6
Q ss_pred cCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCC--CCccceeEEeCCCCCcccccCCCCCCCcCCCC
Q psy7679 120 SHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEE--GSCNSLARFVGRNNANGVDLNRNFPDQFDSSS 197 (608)
Q Consensus 120 ~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~np--dg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~ 197 (608)
+||+|++|.++|++|++.||+++++..||+|++||+|++++++.++ +..++.+++.+++||+|+.
T Consensus 3 ~y~~y~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~~~~~~kp~i~i~~~iH~~E~~------------- 69 (295)
T cd03859 3 GYHNYLEMVDELNAAAAAYPNLTKVKSIGKSYEGRDIIAVKISDNVATDENKPEVLYTSTHHAREWL------------- 69 (295)
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEeeeecCCCCeEEEEEEecCCCCCCCCCEEEEECCcCccchh-------------
Confidence 5899999999999999999999999999999999999999999875 3457789999999999999
Q ss_pred cccccCCCCCCchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc--cC--CCCCCCCCC-------C
Q psy7679 198 ERREQPLNVKKLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK--CL--GDRSSMIGR-------K 258 (608)
Q Consensus 198 ~~~~~~G~~p~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~--~~--~~~~~~~~R-------~ 258 (608)
|.+. ++.+++.|+.. .++..++++ |||++||||+. ++ .+++||++| .
T Consensus 70 -g~~~----------~l~~i~~L~~~~~~d~~~~~lL~~~~i~---ivP~~NPDG~~~~~~~~~~~~wrkn~~~~~~~~~ 135 (295)
T cd03859 70 -SLEM----------AIYLMHYLLENYGKDPRIQNLVDNRELW---FVPVVNPDGYEYDETTGGYRSWRKNRRDNSGDIS 135 (295)
T ss_pred -hHHH----------HHHHHHHHHHhhccCHHHHHHHhcCeEE---EEeeeCCCcceEEeeccCccceeccCCCCCCCcC
Confidence 8765 67777776542 478999999 99999999976 44 688999987 3
Q ss_pred cccccCCCCCCCCCCCCC---------C-----CCCCCcHHHHHHHHHHHhC-CcEEEEEEcccceeeeecCCCCCCCCC
Q psy7679 259 NAHDVDLNRNFPGQFGPS---------K-----YNSVPEPETLAVEKWLQDI-PFVLSANLHGGSLVANYPYDDNQAMKP 323 (608)
Q Consensus 259 n~~GvDLNRnf~~~w~~~---------~-----~~~~sepEt~ai~~~~~~~-~~~~~~~~Hs~~~~i~yP~~~~~~~~~ 323 (608)
||.|||||||||++|+.+ + ..||||||||||++|+.++ ++.+++++|+++++++|||+++..
T Consensus 136 ~~~GvDLNRNf~~~w~~~~~g~s~~p~~~~y~G~~p~sepEt~av~~~~~~~~~~~~~l~~Hs~g~~i~~P~~~~~~--- 212 (295)
T cd03859 136 SSDGVDLNRNYGYKWGYDSGGSSNDPSSETYRGPSAFSEPETQAIRDFVESHKNIKTALNYHTYSNLWLYPYGYQYN--- 212 (295)
T ss_pred cceeecCCCCCCcccCCCCCCCCCCCCCCCccCCCCCchHHHHHHHHHHHhCCCeEEEEEeecCCceEEeCCcCCCC---
Confidence 789999999999999753 2 2799999999999999999 899999999999999999998743
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCC---
Q psy7679 324 QVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCY--- 400 (608)
Q Consensus 324 ~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~--- 400 (608)
...+++|.++++.||+.++.+++. ..|.+ +.||+++|+++||+|.+.++++||+||++.
T Consensus 213 -~~~~~~d~~~~~~la~~~~~~~~y---------------~~~~~--~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~~ 274 (295)
T cd03859 213 -EPMPSKDEIDFVALGGTMAESNGY---------------TPKVS--SDLYTANGDADDWMYGRHKIISLTPEMGPESGG 274 (295)
T ss_pred -CCCCCccHHHHHHHHHHHHHHhCC---------------cccCc--ceeEecCCchHHHHhhCCCcEEEEEEeCCCCCC
Confidence 124689999999999999887521 12222 358999999999999999999999999994
Q ss_pred --CCCCCCCcchHHHhhhhhh
Q psy7679 401 --KFPPAKDLPSYWEDNLPAL 419 (608)
Q Consensus 401 --~~P~~~~l~~~w~~N~~al 419 (608)
++||.++|.++|++|+++|
T Consensus 275 ~gf~~p~~~i~~~~~~~~~~~ 295 (295)
T cd03859 275 TGFYPPDEEISRETSRNYPAL 295 (295)
T ss_pred CCCcCCHHHHHHHHHhccCCC
Confidence 2599999999999999875
No 18
>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,
Probab=100.00 E-value=3.5e-46 Score=386.41 Aligned_cols=262 Identities=21% Similarity=0.237 Sum_probs=222.0
Q ss_pred cCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCC--CccceeEEeCCCCCcccccCCCCCCCcCCCC
Q psy7679 120 SHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEG--SCNSLARFVGRNNANGVDLNRNFPDQFDSSS 197 (608)
Q Consensus 120 ~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npd--g~~~~~~~~g~~ha~evdLNRNf~~~w~~~~ 197 (608)
.||+++++.++|+.|+++||+++++.+||+|++||+|++++++.++. ..++.+++.|++|||||.
T Consensus 3 ~Y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~I~~~~~~~~~k~~v~i~~giHarE~~------------- 69 (304)
T cd06248 3 SYHPLEDHLQWLRDLQAAFPNNSELFTIGKSYEGRTILGLHIWGSGGEKGSKPAIVIHGTVHAREWI------------- 69 (304)
T ss_pred ccCCHHHHHHHHHHHHHHCCCceEEeceEECCCCCeEEEEEEecCCCCCCCCcEEEEECCcCcCccc-------------
Confidence 48999999999999999999999999999999999999999987653 557889999999999999
Q ss_pred cccccCCCCCCchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCC-----cccc
Q psy7679 198 ERREQPLNVKKLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRK-----NAHD 262 (608)
Q Consensus 198 ~~~~~~G~~p~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~-----n~~G 262 (608)
+.+. ++.+++.|++. .+++.++++ |||++||||+. ++.+++||++|. +|.|
T Consensus 70 -~~~~----------~l~~~~~L~~~~~~d~~~~~ll~~~~i~---ivP~~NPDG~~~~~~~~~~wRknr~~~~~~~~~G 135 (304)
T cd06248 70 -STMT----------VEYLAYQLLTGYGSDATVTALLDKFDFY---IIPVVNPDGFVYTQTSDRLWRKNRQPTSGSSCVG 135 (304)
T ss_pred -cHHH----------HHHHHHHHHHhhccCHHHHHHHHhCcEE---EEeeecCchhhhhccchhhhhhcCCCCCCCCcee
Confidence 7654 55555555542 478999999 99999999965 667899999985 5899
Q ss_pred cCCCCCCCCCCCC-------CCC-----CCCCcHHHHHHHHHHHhCC----cEEEEEEcccceeeeecCCCCCCCCCCCC
Q psy7679 263 VDLNRNFPGQFGP-------SKY-----NSVPEPETLAVEKWLQDIP----FVLSANLHGGSLVANYPYDDNQAMKPQVD 326 (608)
Q Consensus 263 vDLNRnf~~~w~~-------~~~-----~~~sepEt~ai~~~~~~~~----~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~ 326 (608)
||||||||++|+. |++ .||||||||||++|+.+++ +++++|+||++++++|||+++..
T Consensus 136 VDLNRNf~~~w~~~g~s~~p~s~~Y~G~~~~sEpEt~av~~~~~~~~~~~~~~~~l~~Hs~~~~i~~P~~~~~~------ 209 (304)
T cd06248 136 TDLNRNWPYKWDGGGSSTNPCSETYRGESPGDAPEAKALAAFLNKLAEGQGIVGYIDWHSYSQLILYPYGYSCD------ 209 (304)
T ss_pred ecCCCCCCCcccCCCCCCCCCCCCcCCCCCCccHHHHHHHHHHHhccccCceEEEEEeccCcceEEecCcCCCC------
Confidence 9999999999973 432 7999999999999999974 89999999999999999999753
Q ss_pred CCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccC-eEEEEEeecCC---CC
Q psy7679 327 SPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHAN-TLEITLELGCY---KF 402 (608)
Q Consensus 327 ~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~-~~~~t~El~~~---~~ 402 (608)
..++|.+.++.||..+++++...+. ..|..|.+. +.||+++|++.||+|...+ +++||+||++. +|
T Consensus 210 ~~~~d~~~~~~la~~~a~ai~~~~g---------~~y~~g~~~-~~~y~~~G~~~D~~y~~~gi~~~~t~El~~~~~~gf 279 (304)
T cd06248 210 AVPPNLENLEELAAGLAKAIRAVSG---------TTYTVGPAC-NTLYQTTGSSVDWVYHVAGAAWSYQLELRDTGTYGF 279 (304)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcC---------CCCcccccc-cccccCCCCcchhhhccCCCcEEEEEEeCCCCCCCC
Confidence 3578999999999999988765422 235555543 5689999999999998766 89999999874 35
Q ss_pred -CCCCCcchHHHhhhhhhhhhHH
Q psy7679 403 -PPAKDLPSYWEDNLPALLSYIE 424 (608)
Q Consensus 403 -P~~~~l~~~w~~N~~alls~~e 424 (608)
+|.++|.+..++....+..++.
T Consensus 280 ~~p~~~i~p~~~e~~~~~~~~~~ 302 (304)
T cd06248 280 VLPAKQIIPTGEETWAGIKYLLK 302 (304)
T ss_pred CCCHHHCcchhHHHHHHHHHHHh
Confidence 7888999999999988877764
No 19
>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the
Probab=100.00 E-value=7.8e-44 Score=368.69 Aligned_cols=261 Identities=23% Similarity=0.293 Sum_probs=222.2
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCccc
Q psy7679 121 HHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERR 200 (608)
Q Consensus 121 y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~ 200 (608)
||+|+++.++|++|++.+|+++++.+||+|++||+|++++++.+++..++.+++.|++||+|+. |.
T Consensus 1 Y~ty~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~~~~~k~~v~i~~~~Hg~E~~--------------g~ 66 (294)
T cd03860 1 YHTYDEIYAWLDELAQKYPDLVTVETIGRSYEGRPIKGVKISNGGRSNKPAIFIDAGIHAREWI--------------SP 66 (294)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEeeeeCCCCCeEEEEEEecCCCCCCcEEEEECCcCcCccc--------------cH
Confidence 7899999999999999999999999999999999999999988765667889999999999999 76
Q ss_pred ccCCCCCCchHHHHHHHHHHhcC------CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCCc-----ccccCCCC
Q psy7679 201 EQPLNVKKLEPETLAMISFIKNN------PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRKN-----AHDVDLNR 267 (608)
Q Consensus 201 ~~~G~~p~sePEt~al~~~l~~~------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~n-----~~GvDLNR 267 (608)
+. ++.+++.|.+. .++++++++ |||++||||+. ++.+++||++|.+ |.||||||
T Consensus 67 ~~----------~~~~~~~L~~~~~~~~~~ll~~~~i~---iiP~~NPDG~~~~~~~~~~wrknr~~~~~~~~~GvDLNR 133 (294)
T cd03860 67 AT----------ALYIINQLVESYDPEVTDLLDNYDWY---ILPVANPDGYEYTHTTDRLWRKNRSPNSGGGCVGVDLNR 133 (294)
T ss_pred HH----------HHHHHHHHHHccCHHHHHHHHcCeEE---EEeeecCCchhhhccccchhcccCCCCCCCCceeeccCC
Confidence 65 56666666543 377889999 99999999976 6678999999864 79999999
Q ss_pred CCCCCCCC-------CC-----CCCCCcHHHHHHHHHHHhC--CcEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCHH
Q psy7679 268 NFPGQFGP-------SK-----YNSVPEPETLAVEKWLQDI--PFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDS 333 (608)
Q Consensus 268 nf~~~w~~-------~~-----~~~~sepEt~ai~~~~~~~--~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~~ 333 (608)
|||+.|.. |. ..||||||||||++++.++ ++++++|+|+++.+++|||++.. .+++|.+
T Consensus 134 nf~~~w~~~~~~~~p~~~~y~G~~~~sepEt~al~~~~~~~~~~~~~~ld~Hs~~~~i~~P~~~~~-------~~~~d~~ 206 (294)
T cd03860 134 NFDYHWGGGGASSDPCSETYAGPSAFSEPETRAVRDFLLSLRGRIKAYLSLHSYGQLILYPWGYTS-------ELPPNYE 206 (294)
T ss_pred CCCCCCccCCCCCCCCCCCccCCCCCchHHHHHHHHHHHhccccEEEEEEeccCCceEEcCCCCCC-------CCCCCHH
Confidence 99999974 32 2789999999999999999 69999999999999999999863 3688999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhcc-CeEEEEEeecCC---CC-CCCCCc
Q psy7679 334 IFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHA-NTLEITLELGCY---KF-PPAKDL 408 (608)
Q Consensus 334 ~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~-~~~~~t~El~~~---~~-P~~~~l 408 (608)
.++.||..++++...... ..|..|... ..||++.|++.||+|... .+++||+||+++ +| ||.+++
T Consensus 207 ~~~~la~~~~~~~~~~~g---------~~Y~~g~~~-~~~y~~~G~~~Dw~y~~~~~~~~~t~El~~~~~~gf~~p~~~i 276 (294)
T cd03860 207 DLREVAKAAADAIRAVYG---------TRYTVGSSA-ETLYPASGGSDDWAYGVAGIPYSYTLELRDTGRYGFLLPASQI 276 (294)
T ss_pred HHHHHHHHHHHHHHHhcC---------CCCcccccc-CccccCCCchhhhhhccCCCcEEEEEEecCCCCCCCcCChHHc
Confidence 999999999988654421 123344432 468999999999999766 569999999986 45 889999
Q ss_pred chHHHhhhhhhhhhHHH
Q psy7679 409 PSYWEDNLPALLSYIEQ 425 (608)
Q Consensus 409 ~~~w~~N~~alls~~eq 425 (608)
.+..++..+.|..++..
T Consensus 277 ~~~~~e~~~~~~~~~~~ 293 (294)
T cd03860 277 IPTAEETFAGIKAMADE 293 (294)
T ss_pred hhHHHHHHHHHHHHHhh
Confidence 99999999998887653
No 20
>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.
Probab=100.00 E-value=6.7e-44 Score=365.45 Aligned_cols=234 Identities=22% Similarity=0.302 Sum_probs=197.5
Q ss_pred CCCceeeeeccccc------cCeEEEEEEeeCCCC----CccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCC
Q psy7679 138 YPNLTRLYSVGQSV------EKRELWVLVYNDEEG----SCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVK 207 (608)
Q Consensus 138 ~p~~~~l~~ig~s~------~gr~i~~l~~~~npd----g~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p 207 (608)
||+++++.+||+|+ +||+|++++++.++. ..++.+++.|++|||||. +.+.
T Consensus 1 ~p~~~~~~~iG~S~~~~~~~eGR~I~~l~ig~~~~~~~~~~kp~v~i~~~iHarE~i--------------g~~~----- 61 (293)
T cd06226 1 YPNLAQWVDIGDSWDKPGGPAGYDIRALKLTNKATNSPTGPKPVFFIMGAIHAREYT--------------TAEL----- 61 (293)
T ss_pred CCcceEEEEeeEecccCcccCCceEEEEEEecCCCCcCCCCCCEEEEECCcCCCcHH--------------HHHH-----
Confidence 68999999999999 999999999987653 457779999999999999 8765
Q ss_pred CchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc-cCCCCCCCCCCC---------cccccCCCCCC
Q psy7679 208 KLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK-CLGDRSSMIGRK---------NAHDVDLNRNF 269 (608)
Q Consensus 208 ~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~-~~~~~~~~~~R~---------n~~GvDLNRnf 269 (608)
++.+++.|++. .++++++++ |||++||||+. .+.+++||++|. |++||||||||
T Consensus 62 -----~l~~i~~L~~~~~~d~~v~~lL~~~~i~---ivP~~NPDG~~~~~~~~~wRkNr~~~~~~~~~~n~~GVDLNRNf 133 (293)
T cd06226 62 -----VLRFAEDLLEGYGTDADATWLLDYHEIH---VVPIVNPDGRKIAEQGLSQRKNANTSGGSNCSGSSYGVDLNRNY 133 (293)
T ss_pred -----HHHHHHHHHHhcccCHHHHHHHhcCeEE---EEecccCCcceeeccCcceeccCCCCCCCCccccccccccccCC
Confidence 66777776542 488999999 99999999987 345789999875 45899999999
Q ss_pred CCCCCC--------CC-----CCCCCcHHHHHHHHHHHhCC----------------cEEEEEEcccceeeeecCCCCCC
Q psy7679 270 PGQFGP--------SK-----YNSVPEPETLAVEKWLQDIP----------------FVLSANLHGGSLVANYPYDDNQA 320 (608)
Q Consensus 270 ~~~w~~--------~~-----~~~~sepEt~ai~~~~~~~~----------------~~~~~~~Hs~~~~i~yP~~~~~~ 320 (608)
|++|+. |+ ..||||||||||++|+.++. +.+++++||++++|+|||+++.
T Consensus 134 ~~~w~~~~~~~~~p~~~~y~G~~p~SEpEt~Av~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~HS~g~~i~~P~g~~~- 212 (293)
T cd06226 134 SFGWGGAGASSGDPCSETYRGPAPGSEPETAALEDYIRGLFPDQRGPGDTDPAPDDTTGVYLDIHSYSNLVLYPWGWTT- 212 (293)
T ss_pred CCcCCcCCCCCCCCCCCCcCCCCCCCcHHHHHHHHHHHhccccccccccccccccccceEEEEeccCCCeEeecCcCCC-
Confidence 999963 43 27999999999999999986 7789999999999999999873
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCC
Q psy7679 321 MKPQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCY 400 (608)
Q Consensus 321 ~~~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~ 400 (608)
.++||.+.++.||+.++...+. .. .....+|+++|+++||+|...++++||+||+++
T Consensus 213 ------~~~p~~~~~~~la~~~~~~~gy---------------~~--~~~~~~Y~~~G~~~Dw~y~~~gi~s~TiElg~~ 269 (293)
T cd06226 213 ------QPAPNDTQLRALGRKFASFNGY---------------TP--QQSVGLYPTDGTTDDWSYGELGVAAYTFEIGTS 269 (293)
T ss_pred ------CCCCCHHHHHHHHHHHhhcCCc---------------cc--cccceEEecCCChhHhHhhcCCceEEEEEccCC
Confidence 3688999999999988753221 11 223468999999999999988999999999999
Q ss_pred CCCCCCCc-chHHHhhhhhhhhh
Q psy7679 401 KFPPAKDL-PSYWEDNLPALLSY 422 (608)
Q Consensus 401 ~~P~~~~l-~~~w~~N~~alls~ 422 (608)
+||+.+.+ +.+|.+||++|+..
T Consensus 270 ~~~~~~~~~~~~~~~n~~~~~~~ 292 (293)
T cd06226 270 FFQSCSSFESGILPDNRPALYYA 292 (293)
T ss_pred CCCCcccccccccccCHHHHhhc
Confidence 99887755 79999999998753
No 21
>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=1.8e-42 Score=363.38 Aligned_cols=244 Identities=25% Similarity=0.269 Sum_probs=190.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCCCcceeeeeccceEEEecCCCCcccccccccccc
Q psy7679 33 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGTNKNKVSIISLYRLVTVSTTPAPIEEDIKKNKYG 112 (608)
Q Consensus 33 ~~~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~~~~~v~~~~hare~~~~~~~~~~~~~l~~~~~~ 112 (608)
|.+||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||+...
T Consensus 1 ~~~Y~ty~ei~~~L~~La~~~P~lv~l~~IG~S~EGR~I~~l~Is~~~~------------------------------- 49 (360)
T cd06905 1 FSRYYRYDELTAALQAWASAYPQLCSLESIGKSYEGRDIWLLTLTNQAT------------------------------- 49 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEecCCCC-------------------------------
Confidence 5689999999999999999999999999999999999999999985210
Q ss_pred ccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCC
Q psy7679 113 FIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQ 192 (608)
Q Consensus 113 ~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~ 192 (608)
+++..++.+|+.+++|||||.
T Consensus 50 ---------------------------------------------------~~~~~Kp~I~i~~giHarEwi-------- 70 (360)
T cd06905 50 ---------------------------------------------------GPDREKPAFWIDANIHATEVT-------- 70 (360)
T ss_pred ---------------------------------------------------CCCCCCcEEEEecCCCCCchH--------
Confidence 011123456677778888887
Q ss_pred cCCCCcccccCCCCCCchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc--cC-CCCCCCCCCCc--
Q psy7679 193 FDSSSERREQPLNVKKLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK--CL-GDRSSMIGRKN-- 259 (608)
Q Consensus 193 w~~~~~~~~~~G~~p~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~--~~-~~~~~~~~R~n-- 259 (608)
+.+. ++.+++.|+.. .++++++++ |||++||||+. ++ .+++||++|.+
T Consensus 71 ------g~~~----------~l~li~~Ll~~y~~d~~i~~lLd~~~~~---IvP~vNPDG~e~~~~~~~r~wRk~r~~~~ 131 (360)
T cd06905 71 ------GSAV----------ALYVIQTLLNGYGSDPEVTRLLDGYTFY---ILPRLNPDGAEQALTHPPYVRRSSRRPYP 131 (360)
T ss_pred ------HHHH----------HHHHHHHHHHhccCCHHHHHHHhcCeEE---EEeeeCCChheEEeeccccccccCCCCcc
Confidence 6554 55566655542 478899999 99999999966 66 78889887742
Q ss_pred ---------------------------------------------------------------------------ccccC
Q psy7679 260 ---------------------------------------------------------------------------AHDVD 264 (608)
Q Consensus 260 ---------------------------------------------------------------------------~~GvD 264 (608)
+.|||
T Consensus 132 ~~~~~~g~~~~D~n~D~~~~~mr~~d~~g~w~~~~~~p~~m~~~~~~~~~g~~y~~~~eg~~~~~dg~~~~~~~~~~GvD 211 (360)
T cd06905 132 YPDRIDGLYPEDIDGDGLILQMRVKDPCGAWKVSERDPRIMVRREPDEFGGTYYRLLPEGLIRNYDGYNIKIAPPLEGLD 211 (360)
T ss_pred cccccccccccccCccchhheeeccccccccccccccchhhccccccccCceeeeecccccccccccccccccccccCCC
Confidence 15999
Q ss_pred CCCCCCCCCCCCC------CCCCCcHHHHHHHHHHHhCC-cEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCHHHHHH
Q psy7679 265 LNRNFPGQFGPSK------YNSVPEPETLAVEKWLQDIP-FVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKL 337 (608)
Q Consensus 265 LNRnf~~~w~~~~------~~~~sepEt~ai~~~~~~~~-~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~~~~~~ 337 (608)
||||||++|.+++ ++||||||||||++|+.+++ +.+++++||+|++|+|||+++.+ ....++|.++++.
T Consensus 212 lNRNf~~~W~~~~~~~y~G~~p~SEpEt~av~~~~~~~~~i~~~is~Hsyg~~il~P~g~~~~----~~~~~~~~~~~~~ 287 (360)
T cd06905 212 FNRNFPHDWRPEGEQYGAGPFPFSEPETRAVVEFWTDHPNINGFISYHTYSGVILRPYSDKPD----DQMPVDDLELYKA 287 (360)
T ss_pred cccCcCCCCCCCCCcCCCCCCCCChHHHHHHHHHHhcCCCeEEEEEecCCcCeeeeCCCCCcC----cCCChhhHHHHHH
Confidence 9999999997643 49999999999999999985 67999999999999999999754 1344678888899
Q ss_pred HHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCC
Q psy7679 338 LASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCY 400 (608)
Q Consensus 338 la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~ 400 (608)
||+.++.. .++++.+. .+.|..|.+ ++++|++.||+|...|+++||+||++.
T Consensus 288 la~~~~~~-----~~y~~~~~-~~~~~~~~~-----~~~~G~~~Dw~y~~~gi~s~t~EL~~~ 339 (360)
T cd06905 288 LGEKGEEL-----TGYPTVSV-YHEFRYHPK-----EVTYGAFDDWAYDHLGIFAFTVELWDL 339 (360)
T ss_pred HHHHHHHh-----cCcccccc-ccceecCCc-----ccccCChhhhhhhcCCeEEEEEEcCCC
Confidence 99887752 23332211 122333322 378899999999888889999999985
No 22
>smart00631 Zn_pept Zn_pept.
Probab=100.00 E-value=4.4e-41 Score=345.60 Aligned_cols=234 Identities=32% Similarity=0.458 Sum_probs=195.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCccc
Q psy7679 121 HHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERR 200 (608)
Q Consensus 121 y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~ 200 (608)
||+|+++.++|++|++.+|+++++..||+|.+||+|++++++.+++..++.+++.+++||+|+. |.
T Consensus 1 y~ty~e~~~~l~~l~~~~~~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~k~~v~i~a~~Hg~E~~--------------g~ 66 (277)
T smart00631 1 YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISDGGSHNKPAIFIDAGIHAREWI--------------GP 66 (277)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEeceecCCCCceEEEEEeCCCCCCCcEEEEECCccccccc--------------cH
Confidence 6899999999999999999999999999999999999999987754457889999999999999 87
Q ss_pred ccCCCCCCchHHHHHHHHHHhcC--------CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCC---cccccCCCC
Q psy7679 201 EQPLNVKKLEPETLAMISFIKNN--------PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRK---NAHDVDLNR 267 (608)
Q Consensus 201 ~~~G~~p~sePEt~al~~~l~~~--------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~---n~~GvDLNR 267 (608)
+. ++.+++.|+.. .++..++++ |||++||||++ .+++++|+++|. |++||||||
T Consensus 67 ~~----------~~~~i~~L~~~~~~~~~~~~ll~~~~i~---ivP~~NPDG~~~~~~~~~~wr~~r~~~~~~~GvDLNR 133 (277)
T smart00631 67 AT----------ALYLINQLLENYGRDPRITKLLDKTDIY---IVPVLNPDGYEYTHTGDRLWRKNRSPNSNCRGVDLNR 133 (277)
T ss_pred HH----------HHHHHHHHHHhcccCHHHHHHHHcCcEE---EEEeecCchhhheecccccccCCCCCCCCCcCcccCC
Confidence 65 66777777663 377889999 99999999976 677899999998 999999999
Q ss_pred CCCCCCCC----CC-----CCCCCcHHHHHHHHHHHhC-CcEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCH----H
Q psy7679 268 NFPGQFGP----SK-----YNSVPEPETLAVEKWLQDI-PFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDD----S 333 (608)
Q Consensus 268 nf~~~w~~----~~-----~~~~sepEt~ai~~~~~~~-~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~----~ 333 (608)
|||+.|+. |. ..||||||||||++++.++ ++.+++|+|+++++++|||++.... .+++. +
T Consensus 134 nf~~~w~~~~~p~~~~y~G~~~~sepEt~ai~~~~~~~~~~~~~id~Hs~~~~i~~p~~~~~~~------~~~~~~~~~~ 207 (277)
T smart00631 134 NFPFHWGKTGNPCSETYAGPSPFSEPETKAVRDFIRSNRRFVLYIDLHSYSQLILYPYGYTKND------LPPNVDDLDA 207 (277)
T ss_pred CCCCCCCCCCCCCCCCcCCCCCCCcHHHHHHHHHHHhcCCeeEEEEeccCCcEEEecCcCCCCC------CCCCHHHHHH
Confidence 99999975 33 2789999999999999999 8999999999999999999986431 23443 4
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccC-eEEEEEeecCCC
Q psy7679 334 IFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHAN-TLEITLELGCYK 401 (608)
Q Consensus 334 ~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~-~~~~t~El~~~~ 401 (608)
+++.+|+.++..++. .|..|...++ +|.+.|++.||+|.+.+ +++||+||++++
T Consensus 208 ~~~~~~~~~~~~~g~-------------~y~~g~~~~~-~y~~~G~~~D~~~~~~gi~~~~t~El~~~~ 262 (277)
T smart00631 208 VAKALAKALASVHGT-------------RYTYGISNGA-IYPASGGSDDWAYGTLGIPFSFTLELRDDG 262 (277)
T ss_pred HHHHHHHHHHHhcCC-------------ccccccccCc-ccCCCCchhhhhhccCCCcEEEEEEecCCC
Confidence 455555555444322 2444556554 58889999999998767 799999999985
No 23
>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=1e-39 Score=331.50 Aligned_cols=230 Identities=22% Similarity=0.246 Sum_probs=189.5
Q ss_pred CCC-HHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCC--CccceeEEeCCCCCcccccCCCCCCCcCCCC
Q psy7679 121 HHN-YTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEG--SCNSLARFVGRNNANGVDLNRNFPDQFDSSS 197 (608)
Q Consensus 121 y~~-~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npd--g~~~~~~~~g~~ha~evdLNRNf~~~w~~~~ 197 (608)
||+ +++|.++|++|++.||+ .++..||+|++||+|+.+.++.+.+ ..++.+++.+++|||||+
T Consensus 2 Yh~~~~ei~~~l~~l~~~~p~-~~~~~ig~S~egr~i~~i~~~~~~~~~~~k~~i~i~agiHarE~i------------- 67 (272)
T cd06227 2 YHTATDEINEEADALVKNIRL-SRLGELIESVKVRNFSSITLNPNGDPSKKKVKALLLFGEHARELI------------- 67 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCC-cEEeeeeeccCCceeeEEEecCCCCCCCCCCEEEEECCccCCchh-------------
Confidence 789 99999999999999999 8888999999999999888876543 246779999999999999
Q ss_pred cccccCCCCCCchHHHHHHHHHHhcC------------CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCCccccc
Q psy7679 198 ERREQPLNVKKLEPETLAMISFIKNN------------PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRKNAHDV 263 (608)
Q Consensus 198 ~~~~~~G~~p~sePEt~al~~~l~~~------------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~n~~Gv 263 (608)
+.+. ++.+++.|+.. .++++++++ |||++||||+. ++++++| |.|++||
T Consensus 68 -~~~~----------~l~li~~L~~~~~~~~~~~~~~~~lL~~~~i~---ivP~~NPDG~~~~~~~~~~w---R~N~~GV 130 (272)
T cd06227 68 -SPET----------GLHLLSNLCGELAETFDWGDLLKNILDNFDLK---IIPNENPDGRKKVESGNYCL---RENENGV 130 (272)
T ss_pred -hHHH----------HHHHHHHHHHhcccccchhHHHHHHHhcCcEE---EEeccCCchheeEeccCccc---ccCCccc
Confidence 7665 66676666542 278999999 99999999976 5677777 6666899
Q ss_pred CCCCCCCCCCCC-----CC-----CCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCHH
Q psy7679 264 DLNRNFPGQFGP-----SK-----YNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDS 333 (608)
Q Consensus 264 DLNRnf~~~w~~-----~~-----~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~~ 333 (608)
|||||||++|+. |+ ..||||||||||++|++++++++++++|+++++++|||+++.. .++++..
T Consensus 131 DLNRNf~~~w~~~~~~~~~~~y~G~~~~sEpEt~av~~~~~~~~~~~~i~~Hs~~~~i~~P~~~~~~------~~~~~~~ 204 (272)
T cd06227 131 DLNRNYGADWGFKEDDYEDEEYSGPAPFSEPETRVLRDLLTSFSPDVFLSVHSGTLALFTPYAYKKE------QPEPNLA 204 (272)
T ss_pred cccccCCcccccCCCCccccccCCCCCCCcHHHHHHHHHHHhCCCeEEEEeccCCCEEEecCCCCCC------CCCCCHH
Confidence 999999999974 33 3799999999999999999999999999999999999999754 2347888
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccC-eEEEEEeecCC
Q psy7679 334 IFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHAN-TLEITLELGCY 400 (608)
Q Consensus 334 ~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~-~~~~t~El~~~ 400 (608)
....++..++..++. .|+.|.+.....|+++|++.||+|...+ +++||+||+..
T Consensus 205 ~~~~~~~~~~~~~~~-------------~y~~G~~~~~~~Y~a~G~s~Dway~~~gip~s~t~EL~~~ 259 (272)
T cd06227 205 EDMRILLLISNKHCP-------------RCQVGSAGKLVGYLAHGTSMDYMYDVLKVPYSFTFEIYGD 259 (272)
T ss_pred HHHHHHHHHHHHhCC-------------CCceecCccceeecCCCCHHHHHhhcCCCcEEEEEEccCC
Confidence 888888877763332 3444554433459999999999996544 68999999953
No 24
>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=3.7e-40 Score=340.08 Aligned_cols=232 Identities=17% Similarity=0.151 Sum_probs=186.6
Q ss_pred ccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC---
Q psy7679 147 VGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN--- 223 (608)
Q Consensus 147 ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~--- 223 (608)
.++|++||+|++++++.+....++.+++.+++|||||. +.+. ++.+++.|+..
T Consensus 6 ~~~S~EgR~I~~l~I~~~~~~~kp~V~i~ggiHAREwi--------------s~~~----------~l~~i~~Ll~~y~~ 61 (332)
T cd06228 6 PHKTYEGRTPHGAKIGAGTLTSRYGALFIGGVHARERG--------------SPDN----------LIYFVSDLLNARKA 61 (332)
T ss_pred CCCCCCCCeeEEEEEeCCCCCCCCEEEEEccccccchh--------------hHHH----------HHHHHHHHHHhhhc
Confidence 47899999999999998766668889999999999999 7655 66666666541
Q ss_pred -----------------CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCC--------cccccCCCCCCCCCCC--
Q psy7679 224 -----------------PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRK--------NAHDVDLNRNFPGQFG-- 274 (608)
Q Consensus 224 -----------------~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~--------n~~GvDLNRnf~~~w~-- 274 (608)
.+++ ++++ |||++||||+. ++.+++|||+|. +|.||||||||+++|+
T Consensus 62 ~~~~~yg~~~~~d~~v~~lL~-~~i~---IvP~vNPDGy~~s~~~~r~WRKNr~~~~~~~~~~c~GVDLNRNf~~~W~~~ 137 (332)
T cd06228 62 GRGIKYGGRTYTAADVKAILD-AGIV---VFPLVNPDGRAHDQTANSCWRKNRNPASAGPNPSSVGVDINRNFDFLWDFQ 137 (332)
T ss_pred cccccccccccccHHHHHHHh-CeEE---EEEeecCcchhheeccchhhhccCCCCcccccCcccccccCCCCCCCcCcc
Confidence 3677 9999 99999999976 678999999986 6999999999999996
Q ss_pred ---------------CCCC-----CCCCcHHHHHHHHHHHhCC-cEEEEEEcccceeeeecCCCCCCCC-----------
Q psy7679 275 ---------------PSKY-----NSVPEPETLAVEKWLQDIP-FVLSANLHGGSLVANYPYDDNQAMK----------- 322 (608)
Q Consensus 275 ---------------~~~~-----~~~sepEt~ai~~~~~~~~-~~~~~~~Hs~~~~i~yP~~~~~~~~----------- 322 (608)
+|++ .||||||||||++++++.+ +.++|++||++++|+|||+++....
T Consensus 138 ~~~~~~~~~~g~S~~Pcse~Y~G~~pfSEPET~av~~~~~~~~~~~~yls~HSygq~il~P~g~~~~~~~~~~~~~~~~~ 217 (332)
T cd06228 138 KYFDPGASRSVASTDPASETFHGTAAFSEPETRNVVWVMDTFKNIRWFVDLHSYGGDVLYSWGDDENQSTNPAMNFMNPA 217 (332)
T ss_pred cccccccccCCCCCCCCccccCCCCCCccHHHHHHHHHHhccCCeEEEEEeccCCceEEecccCCccccccccccccccc
Confidence 2432 9999999999999999987 7899999999999999999975321
Q ss_pred --------------CCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhc-
Q psy7679 323 --------------PQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIH- 387 (608)
Q Consensus 323 --------------~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~- 387 (608)
.+++..++|.+.+..+|+.+++++...+. ..|..|.+. .+|+++|++.||+|..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~ai~~~~g---------~~Y~~g~~~--~lY~~sG~s~D~ay~~~ 286 (332)
T cd06228 218 YDGKRGIVAAPDTRYGEYIDSDDWDAAVNLAARMGLAMAAARG---------RIYTVSQSV--GLYPTSGASDDYAFSRH 286 (332)
T ss_pred cccccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHhC---------CCceeCCcc--cccCCCCChhhhhhhcc
Confidence 01234478999999999999888766532 234445443 4899999999999963
Q ss_pred ------cCeEEEEEeecCC------CC-CCCCCcchHHHhhhh
Q psy7679 388 ------ANTLEITLELGCY------KF-PPAKDLPSYWEDNLP 417 (608)
Q Consensus 388 ------~~~~~~t~El~~~------~~-P~~~~l~~~w~~N~~ 417 (608)
..+++||+||++. +| ||.+++.+.-+|...
T Consensus 287 ~~~~~~~~~~s~t~El~~~~~~~~~gF~~p~~~i~~~~~E~~~ 329 (332)
T cd06228 287 FADAVKRKVFSYTIEFGETNSEAECPFYPTYSEYNQIIKEVAA 329 (332)
T ss_pred ccccccCceEEEEEEeCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 5789999999974 45 787777766554443
No 25
>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification. ; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....
Probab=100.00 E-value=1.9e-40 Score=341.85 Aligned_cols=251 Identities=31% Similarity=0.521 Sum_probs=210.0
Q ss_pred HHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCC---CCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccC
Q psy7679 127 MQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDE---EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQP 203 (608)
Q Consensus 127 i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~n---pdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~ 203 (608)
|.++|+.|+..+|+++++..||+|.+||+|++++++.+ .+..++.+++.+++||+|+. |.+.
T Consensus 1 i~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~k~~v~i~~~~Hg~E~~--------------g~~~- 65 (279)
T PF00246_consen 1 INAYLDALAARYPDIVRLESIGKSYEGRPIYALTIGSNSNGSDPGKPTVLIIAGIHGNEWI--------------GSEA- 65 (279)
T ss_dssp HHHHHHHHHHHSTTTEEEEEEEE-TTS-EEEEEEESSSTTTTSTTSEEEEEEE-SSTT-TH--------------HHHH-
T ss_pred CHHHHHHHHHHCCCcEEEEEeeECCCCCeEEEEEeecccccccccccceEEEecccccccC--------------chHH-
Confidence 57899999999999999999999999999999999875 24557779999999999999 8776
Q ss_pred CCCCCchHHHHHHHHHHhc--C-----CceeeceeeeeeeeeecCCCCCc--cCCCCCCCCCCCcccccCCCCCCCCCCC
Q psy7679 204 LNVKKLEPETLAMISFIKN--N-----PFVLSGNLHGGAIVASYPFDDSK--CLGDRSSMIGRKNAHDVDLNRNFPGQFG 274 (608)
Q Consensus 204 G~~p~sePEt~al~~~l~~--~-----~~l~~~~~h~g~ivp~~NpDG~~--~~~~~~~~~~R~n~~GvDLNRnf~~~w~ 274 (608)
++.+++.|.+ . .+++++.++ |||++||||+. ...++.|+++|.|++|||||||||..|+
T Consensus 66 ---------~l~~~~~L~~~~~~~~~~~ll~~~~i~---iiP~~NPDG~~~~~~~~~~w~~~R~n~~GvDlNRnf~~~w~ 133 (279)
T PF00246_consen 66 ---------LLYLIEELLSGYDDPEVKELLDNVVIY---IIPMVNPDGYEYGTSGDRGWRKNRSNANGVDLNRNFPYQWN 133 (279)
T ss_dssp ---------HHHHHHHHHHHTTSHHHHHHHHHEEEE---EES-SSHHHHHHHHHT-TTCCSTSSBTTS--GGGSSSSSTT
T ss_pred ---------HHHHHHHhhccccchhhhhhcccceEE---EEeeecccceeeeeecccccccccccccccccccccCcccc
Confidence 7888888876 2 488999999 99999999966 5678999999999999999999999995
Q ss_pred C-------CC-----CCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy7679 275 P-------SK-----YNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSY 342 (608)
Q Consensus 275 ~-------~~-----~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~ 342 (608)
. |. ..|+||||||||+++++++++.+++|+|+++..++|||++... .+++|.+.++.|++.+
T Consensus 134 ~~~~~~~~~~~~y~g~~~~sepEt~al~~~~~~~~~~~~id~H~~~~~~~~p~~~~~~------~~~~~~~~~~~la~~~ 207 (279)
T PF00246_consen 134 EEGSSSNPCSETYRGPAPFSEPETRALRNLIQDWNPDFFIDFHSGGNAILYPYGYSYD------EPPPDADELRSLARAF 207 (279)
T ss_dssp SSSSBSSTTSTTB--SSTTTSHHHHHHHHHHHHTTEEEEEEEEESSSEEEESESSSST------SSTTTHHHHHHHHHHH
T ss_pred cccccCCCCCcccCCCcchhhhHHHHHHHHHhhcceeEEEeccccccceeeecccccc------cCCchhhhhhHHHHHH
Confidence 4 22 2799999999999999999999999999999999999998642 4788999999999999
Q ss_pred HHhhccccCCCCCCCCCCCCC-CCcccccceeeeccCcccchhhhccCe-EEEEEeecCCC--CCCCCCcchHHHhhhhh
Q psy7679 343 ANAHKKMYKDPGCPEYPEENF-PGGIVNGAQWYVVSGGMQDYNYIHANT-LEITLELGCYK--FPPAKDLPSYWEDNLPA 418 (608)
Q Consensus 343 a~~~~~~~~~~~~~~~~~~~f-~~g~~~g~~~Y~~~G~~~Dw~y~~~~~-~~~t~El~~~~--~P~~~~l~~~w~~N~~a 418 (608)
+.+.+.+..+. .| ..|+.++..||++.|++.||+|...++ ++||+|++|++ +||.+++..+|++|.++
T Consensus 208 ~~~~~~~~~~~--------~y~~~~~~~~~~~~~~~G~~~D~~~~~~g~~~~~t~E~~~~~~f~p~~~~i~~~~~~~~~~ 279 (279)
T PF00246_consen 208 AEALGSMSRGQ--------NYDSYGITNGDNWYPASGSSDDYAYYHHGIPFSFTLELGCCGNFYPPASEIEPIWEENWEA 279 (279)
T ss_dssp HHHHHCHTTTT--------TBSEEEEEHHHHTTTTSSSHHHHHHHHTTSSEEEEEEESSSSSTSS-GGGHHHHHHHHHH-
T ss_pred HHHhhhccccc--------cccccCCcccccccccccccceeehhhcCCcEEEEEEeCCCCCccCCHHHHHHHHHHHhhC
Confidence 99988764421 23 456566666999999999999988888 99999999998 79999999999998764
No 26
>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.
Probab=100.00 E-value=2.2e-35 Score=299.38 Aligned_cols=208 Identities=19% Similarity=0.198 Sum_probs=163.7
Q ss_pred cccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhc-------
Q psy7679 150 SVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN------- 222 (608)
Q Consensus 150 s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~------- 222 (608)
|++||+|++++++.++ +.+++.|++|||||. +... ++.+++.|+.
T Consensus 1 S~eGR~I~~~~ig~~~----~~v~i~agiHarE~~--------------~~~~----------~l~~i~~L~~~~~~~~~ 52 (255)
T cd06229 1 SVLGRDIYEVKLGNGP----KTVFYNASFHAREWI--------------TTLL----------LMKFIEEYARAYENNEK 52 (255)
T ss_pred CCCCceeeEEEEcCCC----ceEEEECCccccchh--------------hHHH----------HHHHHHHHHHHhccCcc
Confidence 6799999999998653 679999999999999 7655 5666655543
Q ss_pred ------CCceeeceeeeeeeeeecCCCCCc--cCC----------CCCCCCC-------CCcccccCCCCCCCCCCCC--
Q psy7679 223 ------NPFVLSGNLHGGAIVASYPFDDSK--CLG----------DRSSMIG-------RKNAHDVDLNRNFPGQFGP-- 275 (608)
Q Consensus 223 ------~~~l~~~~~h~g~ivp~~NpDG~~--~~~----------~~~~~~~-------R~n~~GvDLNRnf~~~w~~-- 275 (608)
..++++++++ |||++||||+. +.+ +.+|+++ |.||+|||||||||+.|..
T Consensus 53 ~~~~~~~~lL~~~~i~---ivP~~NPDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~GVDLNRNf~~~w~~~~ 129 (255)
T cd06229 53 LGGYDLRELLENVTIC---FVPMVNPDGVEIVQNGPYAIRNYYLELLVINAGSINFKEWKANARGVDLNRNFPAGWEKEK 129 (255)
T ss_pred ccchhHHHHHhcCeEE---EEeCccCCchheeeecccccccchhhhHHhhcCCCcccccccCCcccccCCCCCCCCCcCC
Confidence 1477899999 99999999976 332 2345444 5589999999999999964
Q ss_pred ------CC-----CCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy7679 276 ------SK-----YNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYAN 344 (608)
Q Consensus 276 ------~~-----~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a~ 344 (608)
|+ ..||||||||||++|+.++++.+++++|+++++|+|||+.. .+ ...+.||+.+++
T Consensus 130 ~~s~~p~~~~y~G~~p~SEpEtral~~~~~~~~~~~~i~~Hs~g~~i~~~~~~~----------~~--~~~~~~~~~~~~ 197 (255)
T cd06229 130 AGPKAPAPRNYKGEQPLSEPETIALAELTRENRFRAVLAYHSQGEEIYWGYGGL----------EP--PESQKMAELLAE 197 (255)
T ss_pred CCCCCCCccCcCCCCCCCchhHHHHHHHHHhCCCeEEEEecCCCCeEEecCCCC----------Cc--hHHHHHHHHHhh
Confidence 32 28999999999999999999999999999999999999743 11 345566666555
Q ss_pred hhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCCC-CCCCcchHHHhhhhh
Q psy7679 345 AHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFP-PAKDLPSYWEDNLPA 418 (608)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~P-~~~~l~~~w~~N~~a 418 (608)
.++ +.+ +...+ |+++|++.||+|...++++||+||+...-| |.++++.+|++|+.-
T Consensus 198 ~~g-----y~~----------~~~~~---~~~~G~~~Dw~~~~~gi~s~t~El~~~~~~~~~~~~~~~~~~~~~~ 254 (255)
T cd06229 198 VSG-----YEL----------VDSES---KRSYGGYKDWFIQKFRRPGFTIEIGRGTNPLPLSQFKTIYKENKGI 254 (255)
T ss_pred ccC-----Ccc----------ccccc---cCCCCCHHHHHHhhcCCeEEEEEeCCCCCCCChHHhHHHHHhhcCC
Confidence 433 222 22212 888999999999988899999999997664 789999999999863
No 27
>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=99.97 E-value=5.8e-31 Score=263.68 Aligned_cols=209 Identities=19% Similarity=0.213 Sum_probs=159.0
Q ss_pred CCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccc
Q psy7679 122 HNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERRE 201 (608)
Q Consensus 122 ~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~ 201 (608)
.+++++.+||++|+.. +.+++..||+|++||+|+++.++. ++ .++.+++.|++||+|+. |..
T Consensus 8 ~~~~~i~~~l~~L~~~--~~v~~~~iG~S~eGR~i~~l~ig~-~~-~k~~v~i~~~iH~~E~~--------------g~~ 69 (244)
T cd06237 8 IDNQDVKDWVDSLIKQ--PFVELELLGLSTQGRPLKALERGN-PD-SKEWIVVISRQHPPEVT--------------GAL 69 (244)
T ss_pred CCHHHHHHHHHHHhcC--CCeEEEEeeEcCCCCEEEEEEecC-CC-CCceEEEEcCcCCCcHH--------------HHH
Confidence 4788999999999755 678999999999999999998754 33 35779999999999999 755
Q ss_pred cCCCCCCchHHHHHHHHHHhcC-----CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCC
Q psy7679 202 QPLNVKKLEPETLAMISFIKNN-----PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPS 276 (608)
Q Consensus 202 ~~G~~p~sePEt~al~~~l~~~-----~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~ 276 (608)
. ++.+++++.+. .++++++++ |||++||||+... .| |.|++||||||||+
T Consensus 70 ~----------~~~~~~~l~~~~~~~~~ll~~~~i~---ivP~~NPDG~~~~---~w---R~N~~GvDLNRnw~------ 124 (244)
T cd06237 70 A----------MKAFIETLLSDSELAKKFRAKYNVL---LVPNMNPDGVDLG---HW---RHNANGIDLNRDWS------ 124 (244)
T ss_pred H----------HHHHHHHHHhCCHHHHHHHHhCEEE---EEEeeCcchhhcC---Cc---cCCCCCcCCCCCCC------
Confidence 4 56666766643 578999999 9999999997742 24 78889999999994
Q ss_pred CCCCCCcHHHHHHHHHHHhC-----CcEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhhccccC
Q psy7679 277 KYNSVPEPETLAVEKWLQDI-----PFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAHKKMYK 351 (608)
Q Consensus 277 ~~~~~sepEt~ai~~~~~~~-----~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a~~~~~~~~ 351 (608)
++|||||||+++++.+. ++.+++|+|++++.++|||++... . ..|+ ...+ ....+. ..| .
T Consensus 125 ---~~sepEt~a~~~~~~~~~~~~~~~~~~id~Hs~~~~i~~~~~~~~~----~--~~p~-~~~~-~~~~l~---~~~-~ 189 (244)
T cd06237 125 ---NFNQPETRAIRDYLVRLVKEGGKIVFALDFHSTWHDVFYTMPEDYK----L--QFPG-FVAD-WLKELD---KRI-L 189 (244)
T ss_pred ---CCCCHHHHHHHHHHHHHhccCCCEEEEEEeccCCcceEecCCCCCC----c--ccch-HHHH-HHHHhc---CcC-C
Confidence 89999999999999854 789999999999999999986322 1 1121 1122 222211 112 2
Q ss_pred CCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCC
Q psy7679 352 DPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCY 400 (608)
Q Consensus 352 ~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~ 400 (608)
++.+ +.. +..|.++|++.||+|...++++||+||++.
T Consensus 190 ~Y~~----------~~~--~~~~~~~g~~~Dw~~~~~~~~~~T~E~g~~ 226 (244)
T cd06237 190 DYKV----------NNR--SGSSPDRGVSKQYFADEHGAHAITYEVGDN 226 (244)
T ss_pred Ccee----------ccc--cCcccCCCcHHHHHHHhCCCcEEEEecCCC
Confidence 2221 111 123678899999999988889999999974
No 28
>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro
Probab=99.97 E-value=1.5e-31 Score=283.15 Aligned_cols=179 Identities=21% Similarity=0.354 Sum_probs=146.2
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC------Ccceeeeec--cceEEEecCCCCcccccc
Q psy7679 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT------NKNKVSIIS--LYRLVTVSTTPAPIEEDI 106 (608)
Q Consensus 35 ~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~------~~~~v~~~~--hare~~~~~~~~~~~~~l 106 (608)
+||+|+||.+||++|+++||+++++++||+|+|||+|++|+||++ +++.+++++ |+|||++.....++++.|
T Consensus 4 ~yh~y~em~~~L~~la~~yP~i~~l~sIGkS~EGR~L~~l~Is~~~~~~~~~kP~v~~~g~iHgrE~ig~~~~l~li~~L 83 (405)
T cd03869 4 KHHNYKDMRQLMKVVNEMCPNITRIYNIGKSYQGLKLYAMEISDNPGEHELGEPEFRYVAGMHGNEVLGRELLLLLMQFL 83 (405)
T ss_pred ccCCHHHHHHHHHHHHHHCCCceEEEEeEECcCCceEEEEEEecCCccccCCCCeEEEEcccCCCcHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999863 367888888 999999776655555544
Q ss_pred ccccccccccccccCC-CHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce--------eEEeCC
Q psy7679 107 KKNKYGFIIPVQFSHH-NYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL--------ARFVGR 177 (608)
Q Consensus 107 ~~~~~~~~~~~~~~y~-~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~--------~~~~g~ 177 (608)
+. .|. +.+.++++| ++.+++ ++|+.||||++.+ .|..++
T Consensus 84 ~~-----------~y~~~d~~v~~Ll--------------------~~~~i~-IvP~~NPDG~e~s~~~~~~~~~Wrk~R 131 (405)
T cd03869 84 CQ-----------EYLAGNPRVVHLV--------------------EETRIH-LLPSMNPDGYEKAYEAGSELGGWALGR 131 (405)
T ss_pred HH-----------hhhcCCHHHHHHH--------------------hcCeEE-EEeeeCCchhhhhhhcCccccccccCc
Confidence 43 121 122333333 445566 5599999999764 467789
Q ss_pred CCCcccccCCCCCC----CcCCC--------------CcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeee
Q psy7679 178 NNANGVDLNRNFPD----QFDSS--------------SERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVAS 239 (608)
Q Consensus 178 ~ha~evdLNRNf~~----~w~~~--------------~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~ 239 (608)
.+|+|||||||||+ .|+.. +.+..|+|+.|++||||+|+++|+++.+|+++.++|||++|..
T Consensus 132 ~na~GVDLNRNFp~~~~~~W~~~~~~~~~~~~~~~~~Pc~~~Y~G~~~~sEPET~Av~~~i~~~~FvLSanlHgG~lv~~ 211 (405)
T cd03869 132 WTEEGIDINHNFPDLNTILWEAEDKKKVPRKVPNHHIPIPEWYLSENATVAPETRAVIAWMEKIPFVLGANLQGGELVVS 211 (405)
T ss_pred cCCCCccccCCCcccccccccccccccccccccccCCCCccccCCCCCCCcHHHHHHHHHHHhCCceEEEEecCccEEEE
Confidence 99999999999996 78632 1233578999999999999999999999999999999999999
Q ss_pred cCCCCC
Q psy7679 240 YPFDDS 245 (608)
Q Consensus 240 ~NpDG~ 245 (608)
|++|..
T Consensus 212 YPyd~~ 217 (405)
T cd03869 212 YPYDMT 217 (405)
T ss_pred cCcccc
Confidence 999983
No 29
>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil
Probab=99.97 E-value=5.3e-31 Score=271.99 Aligned_cols=180 Identities=19% Similarity=0.213 Sum_probs=147.4
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC---Ccceeeeec--cceEEEecCCCCccccccc
Q psy7679 33 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT---NKNKVSIIS--LYRLVTVSTTPAPIEEDIK 107 (608)
Q Consensus 33 ~~~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~---~~~~v~~~~--hare~~~~~~~~~~~~~l~ 107 (608)
|.+||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||+. .|+.+++++ |||||++++.+.+++.+|+
T Consensus 2 ~~~Y~~~~ei~~~l~~l~~~~p~~v~~~~iG~S~egR~I~~l~is~~~~~~k~~v~i~~giHarE~i~~~~~l~~i~~Ll 81 (300)
T cd06246 2 YEQYHSLNEIYSWIEFITERHSDMLEKIHIGSSFEKRPLYVLKVSGKEQTAKNAIWIDCGIHAREWISPAFCLWFVGHAT 81 (300)
T ss_pred CCccCCHHHHHHHHHHHHHHCCCcEEEEecccCCCCCeEEEEEEeCCCCCCCCeEEEecccCccchhhHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999863 467899888 9999999888777777765
Q ss_pred cccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce-----eEEeCC-----
Q psy7679 108 KNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL-----ARFVGR----- 177 (608)
Q Consensus 108 ~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~-----~~~~g~----- 177 (608)
. .|.+...+.++|+++ +++ ++|+.||||++.. +|...+
T Consensus 82 ~-----------~~~~d~~~~~lL~~~--------------------~i~-ivP~~NPDG~~~~~~~~r~wRknr~~~~~ 129 (300)
T cd06246 82 Q-----------FYGIDGQMTNLLRHM--------------------DFY-IMPVMNVDGYDYTWKKNRMWRKNRSFYAN 129 (300)
T ss_pred H-----------HhcCCHHHHHHHHhC--------------------eEE-EEEeecCCceeEEEeccceeecCCCCCCC
Confidence 5 233444555555443 355 5699999999865 555333
Q ss_pred CCCcccccCCCCCCCcCCC-----CcccccCCCCCCchHHHHHHHHHHhcCC--ceeeceeeeeeeeeecCCCC
Q psy7679 178 NNANGVDLNRNFPDQFDSS-----SERREQPLNVKKLEPETLAMISFIKNNP--FVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 178 ~ha~evdLNRNf~~~w~~~-----~~~~~~~G~~p~sePEt~al~~~l~~~~--~l~~~~~h~g~ivp~~NpDG 244 (608)
.+|+|||||||||+.|+.. +++..|+|++|||||||+++++|+.+++ +...+++|++..+.+++++-
T Consensus 130 ~~~~GVDLNRNf~~~w~~~g~s~~p~~~~y~G~~p~SEpEt~av~~~~~~~~~~i~~~is~Hs~g~~i~~P~~~ 203 (300)
T cd06246 130 SHCIGTDLNRNFDAKWCCEGASSSSCSETYCGPYPESEPEVKAVASFLRRHINQIKAYISMHSYSQMILFPYSY 203 (300)
T ss_pred CCccCcccccccccccCCCCCCCCCCCCCcCCCCCCccHHHHHHHHHHHhCCcceeEEEEeccCCcEEEecccc
Confidence 4699999999999999732 2334689999999999999999999874 66788999999999999875
No 30
>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3.4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.
Probab=99.97 E-value=1.2e-30 Score=268.43 Aligned_cols=180 Identities=18% Similarity=0.163 Sum_probs=145.0
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC---Ccceeeeec--cceEEEecCCCCccccccc
Q psy7679 33 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT---NKNKVSIIS--LYRLVTVSTTPAPIEEDIK 107 (608)
Q Consensus 33 ~~~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~---~~~~v~~~~--hare~~~~~~~~~~~~~l~ 107 (608)
|.+||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||+. +|+.+++++ |||||+++..+.+++++|+
T Consensus 1 ~~~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EgR~I~~l~i~~~~~~~k~~i~i~~giHarEwi~~~~~l~~i~~Ll 80 (298)
T cd06247 1 YTKYHPMDEIYNWMDQIKEKYSELVSQHYLGCTYELRPMYYLKIGWPSDKPKKIIWMDCGIHAREWISPAFCQWFVKEIL 80 (298)
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCcEEEEeceECcCCceEEEEEeecCCCCCCcEEEEeccccccccccHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999853 456788887 9999999888777777766
Q ss_pred cccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce-----eEEeCC-----
Q psy7679 108 KNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL-----ARFVGR----- 177 (608)
Q Consensus 108 ~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~-----~~~~g~----- 177 (608)
. .|.+...+.++|++ .+++ ++|+.||||++.. +|...+
T Consensus 81 ~-----------~y~~d~~~~~ll~~--------------------~~i~-ivP~~NPDGy~ys~~~~r~wRknr~~~~~ 128 (298)
T cd06247 81 Q-----------NYKTDPILRKVLKN--------------------VDFY-VLPVLNIDGYIYTWTTDRLWRKNRSPHNN 128 (298)
T ss_pred H-----------HhccCHHHHHHHhc--------------------CeEE-EEeeecCCcceEEecccceecccCCCCCC
Confidence 5 23333444444443 3355 6699999999865 454332
Q ss_pred CCCcccccCCCCCCCcCCC---C--cccccCCCCCCchHHHHHHHHHHhcC--CceeeceeeeeeeeeecCCCC
Q psy7679 178 NNANGVDLNRNFPDQFDSS---S--ERREQPLNVKKLEPETLAMISFIKNN--PFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 178 ~ha~evdLNRNf~~~w~~~---~--~~~~~~G~~p~sePEt~al~~~l~~~--~~l~~~~~h~g~ivp~~NpDG 244 (608)
..|+||||||||+++|+.. . ++..|+|+.|||||||+++.+++.+. .+...+++|++..+.+++++-
T Consensus 129 ~~c~GVDLNRNf~~~w~~~g~s~~p~~~~y~G~~pfSEpEt~ai~~~~~~~~~~i~~~l~~Hsyg~~i~~P~g~ 202 (298)
T cd06247 129 GTCYGVDLNRNFNSQWCSIGASRNCRSNIFCGTGPESEPETKAVARLIESKKSDILCYLTIHSYGQLILLPYGY 202 (298)
T ss_pred CCccccccccCCCCccccCCCCCCCCCCCcCCCCCCCcHHHHHHHHHHHhcCcceEEEEEeccCCCeEEeCCcC
Confidence 3689999999999999742 2 23468999999999999999999987 466789999998888888754
No 31
>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse
Probab=99.97 E-value=1.1e-30 Score=268.58 Aligned_cols=178 Identities=20% Similarity=0.197 Sum_probs=147.0
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC---Ccceeeeec--cceEEEecCCCCccccccccc
Q psy7679 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT---NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKN 109 (608)
Q Consensus 35 ~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~---~~~~v~~~~--hare~~~~~~~~~~~~~l~~~ 109 (608)
.||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||+. .|+.|++++ |||||++++.+.+++++|+.
T Consensus 1 ~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EGR~i~~l~i~~~~~~~k~~i~i~~giHarEwi~~~~~~~~i~~Ll~- 79 (300)
T cd03872 1 VYHPLEEIESWMFYMNKTHSDLVHLFSIGKSYEGRSLYVLKLGKRTRSYKKAVWIDCGIHAREWIGPAFCQWFVKEALN- 79 (300)
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEEecCCCCCCCeEEEecccccccccCHHHHHHHHHHHHH-
Confidence 399999999999999999999999999999999999999999864 467899988 99999998888887777765
Q ss_pred cccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce-----eEEe-----CCCC
Q psy7679 110 KYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL-----ARFV-----GRNN 179 (608)
Q Consensus 110 ~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~-----~~~~-----g~~h 179 (608)
.|.+..++..+|+++ ++ .++|+.||||++.+ +|.. .+.+
T Consensus 80 ----------~~~~d~~~~~lL~~~--------------------~~-~ivP~vNPDGy~ys~~~~r~wrknR~~~~~~~ 128 (300)
T cd03872 80 ----------SYQTDPAMKKMLNQL--------------------YF-YVMPVFNVDGYHYSWTNDRFWRKTRSKNSRYQ 128 (300)
T ss_pred ----------hccCChHHHHHHhhC--------------------eE-EEEeeecCCcceeeeccchhhhccCCCCCCCC
Confidence 233445566655544 34 46699999999875 3432 2456
Q ss_pred CcccccCCCCCCCcCCC-----CcccccCCCCCCchHHHHHHHHHHhcC--CceeeceeeeeeeeeecCCCC
Q psy7679 180 ANGVDLNRNFPDQFDSS-----SERREQPLNVKKLEPETLAMISFIKNN--PFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 180 a~evdLNRNf~~~w~~~-----~~~~~~~G~~p~sePEt~al~~~l~~~--~~l~~~~~h~g~ivp~~NpDG 244 (608)
|+||||||||++.|+.. ++...|+|+.||||||++++.+|+.+. .+...+++|++..+.+++++-
T Consensus 129 c~GVDLNRNf~~~w~~~g~s~~Pcs~~Y~G~~pfSEpEt~al~~~~~~~~~~i~~~ls~Hsyg~~i~~P~g~ 200 (300)
T cd03872 129 CRGVDANRNWKVKWCDEGASLHPCDDTYCGPFPESEPEVKAVAQFLRKHRKHVRAYLSFHAYAQMLLYPYSY 200 (300)
T ss_pred ccccccccccCcccCCCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCccceEEEEEccCCcEEEecCCC
Confidence 99999999999999742 233468999999999999999999986 578889999999999999854
No 32
>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,
Probab=99.96 E-value=1e-29 Score=263.52 Aligned_cols=180 Identities=19% Similarity=0.232 Sum_probs=146.8
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC-----Ccceeeeec--cceEEEecCCCCccccc
Q psy7679 33 NPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT-----NKNKVSIIS--LYRLVTVSTTPAPIEED 105 (608)
Q Consensus 33 ~~~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~-----~~~~v~~~~--hare~~~~~~~~~~~~~ 105 (608)
|.+||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||+. .|+.+++.+ |||||+++....+++..
T Consensus 1 ~~~Y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~I~~~~~~~~~k~~v~i~~giHarE~~~~~~~l~~~~~ 80 (304)
T cd06248 1 FDSYHPLEDHLQWLRDLQAAFPNNSELFTIGKSYEGRTILGLHIWGSGGEKGSKPAIVIHGTVHAREWISTMTVEYLAYQ 80 (304)
T ss_pred CCccCCHHHHHHHHHHHHHHCCCceEEeceEECCCCCeEEEEEEecCCCCCCCCcEEEEECCcCcCccccHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999853 467888888 99999988877777766
Q ss_pred cccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce-----eEEeCC---
Q psy7679 106 IKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL-----ARFVGR--- 177 (608)
Q Consensus 106 l~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~-----~~~~g~--- 177 (608)
|+. .|.+..++..+|+++ +++ ++|+.||||++.. +|...+
T Consensus 81 L~~-----------~~~~d~~~~~ll~~~--------------------~i~-ivP~~NPDG~~~~~~~~~~wRknr~~~ 128 (304)
T cd06248 81 LLT-----------GYGSDATVTALLDKF--------------------DFY-IIPVVNPDGFVYTQTSDRLWRKNRQPT 128 (304)
T ss_pred HHH-----------hhccCHHHHHHHHhC--------------------cEE-EEeeecCchhhhhccchhhhhhcCCCC
Confidence 665 233444555555554 344 6699999999754 333222
Q ss_pred --CCCcccccCCCCCCCcCC-----CCcccccCCCCCCchHHHHHHHHHHhcC----CceeeceeeeeeeeeecCCCC
Q psy7679 178 --NNANGVDLNRNFPDQFDS-----SSERREQPLNVKKLEPETLAMISFIKNN----PFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 178 --~ha~evdLNRNf~~~w~~-----~~~~~~~~G~~p~sePEt~al~~~l~~~----~~l~~~~~h~g~ivp~~NpDG 244 (608)
..|+|||||||||..|+. .+++..|+|+.|+||||++++++|+.+. ++...+++|++..+.+++++-
T Consensus 129 ~~~~~~GVDLNRNf~~~w~~~g~s~~p~s~~Y~G~~~~sEpEt~av~~~~~~~~~~~~~~~~l~~Hs~~~~i~~P~~~ 206 (304)
T cd06248 129 SGSSCVGTDLNRNWPYKWDGGGSSTNPCSETYRGESPGDAPEAKALAAFLNKLAEGQGIVGYIDWHSYSQLILYPYGY 206 (304)
T ss_pred CCCCceeecCCCCCCCcccCCCCCCCCCCCCcCCCCCCccHHHHHHHHHHHhccccCceEEEEEeccCcceEEecCcC
Confidence 358999999999999974 2334468999999999999999999986 599999999999888888875
No 33
>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a
Probab=99.96 E-value=8.8e-30 Score=269.04 Aligned_cols=169 Identities=23% Similarity=0.357 Sum_probs=140.1
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC------Ccceeeeec--cceEEEecCCCCcccccc
Q psy7679 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT------NKNKVSIIS--LYRLVTVSTTPAPIEEDI 106 (608)
Q Consensus 35 ~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~------~~~~v~~~~--hare~~~~~~~~~~~~~l 106 (608)
+||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||++ +++++++++ |+|||++++...++++.|
T Consensus 1 ~Yh~y~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~l~~l~Is~~~~~~~~~kp~v~~~~giHg~E~ig~e~~l~l~~~L 80 (363)
T cd06245 1 RYHHYKELSEFLRGLTLNYPHITNLTSLGQSVEFRPILSLEISNKPNNSEPEEPKIRFVAGIHGNAPVGTELLLALAEFL 80 (363)
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCceEEEEEecCCCCCCCCCCCEEEEECCccCCcHHHHHHHHHHHHHH
Confidence 599999999999999999999999999999999999999999864 377899988 999999776666655555
Q ss_pred ccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCcccee-----EEeCCCCCc
Q psy7679 107 KKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLA-----RFVGRNNAN 181 (608)
Q Consensus 107 ~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~-----~~~g~~ha~ 181 (608)
+. .|.+.+.+.++| ++.+++ ++|+.||||++.+. ...++.+|+
T Consensus 81 ~~-----------~y~~d~~v~~ll--------------------~~~~i~-ivP~~NPDG~e~~~~~~~~~~~~r~na~ 128 (363)
T cd06245 81 CM-----------NYGKNPAVTKLI--------------------DRTRIV-IVPSLNPDGREKAQEKQCTSKEGHTNAH 128 (363)
T ss_pred HH-----------HccCCHHHHHHH--------------------hCCEEE-EEeccCCchHHHeecCCCcccCCCCCcc
Confidence 43 122333334433 444565 56999999998752 234678999
Q ss_pred ccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCC
Q psy7679 182 GVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 182 evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG 244 (608)
|+|||||||+.| .|+.|+||||++|+++|+.+.+|...+++|||+.+.+||+|.
T Consensus 129 GvDLNRNf~~~~---------~g~~~~sepEt~Av~~~~~~~~f~l~~~lH~~~~~~~yPy~~ 182 (363)
T cd06245 129 GKDLDTDFTSNA---------SNMSADVQPETKAIIDNLISKDFTLSVALDGGSVVATYPYDK 182 (363)
T ss_pred cccCCCCCCccc---------CCCCCCCcHHHHHHHHHHHhCCceEEEEEcCCcEEEEecCCC
Confidence 999999999875 367899999999999999999999999999999999999997
No 34
>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=99.96 E-value=1.4e-28 Score=248.25 Aligned_cols=224 Identities=17% Similarity=0.173 Sum_probs=169.3
Q ss_pred CCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccc
Q psy7679 122 HNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERRE 201 (608)
Q Consensus 122 ~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~ 201 (608)
|+++++.++|+.+.. ...+++..||+|++||+|++++++. |+..++.+|+.+++|++|+. +..
T Consensus 11 ys~~~~~~~l~~~~~--~~~v~~~~iG~S~eGR~i~~l~I~~-~~~~k~~V~i~a~iH~~E~~--------------g~~ 73 (263)
T cd06234 11 YSYERHLALIARAQG--APDVRLEVLGQTVQGRDIDLLTFGE-PGPGKKKLWIIARQHPGETM--------------AEW 73 (263)
T ss_pred CCHHHHHHHHHHHhc--CCCeEEEEEEEcCCCCeEEEEEEcc-CCCCCCEEEEECCCCCCcHH--------------HHH
Confidence 689999999999875 3478999999999999999998875 55567889999999999988 654
Q ss_pred cCCCCCCchHHHHHHHHHHhcC------CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCC
Q psy7679 202 QPLNVKKLEPETLAMISFIKNN------PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGP 275 (608)
Q Consensus 202 ~~G~~p~sePEt~al~~~l~~~------~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~ 275 (608)
. +..+++.+.+. .+++.++++ |||++||||+... ..|.||.||||||||+.
T Consensus 74 ~----------~~~ll~~L~~~~d~~~~~ll~~~~~~---IvP~~NPDG~~~g------~~R~n~~GvDLNRnw~~---- 130 (263)
T cd06234 74 F----------MEGLLERLLDPDDAVARALLEKAVFY---VVPNMNPDGSARG------HLRTNAAGANLNREWAE---- 130 (263)
T ss_pred H----------HHHHHHHHhhcCCHHHHHHHhcCEEE---EEeeecchhhhhc------CCccCCCCCCCCCCCCC----
Confidence 4 55566666532 478999999 9999999997642 24889999999999962
Q ss_pred CCCCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhhccccCCCCC
Q psy7679 276 SKYNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAHKKMYKDPGC 355 (608)
Q Consensus 276 ~~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~ 355 (608)
..++|||||++|++++++.++++++|+|+++++ ||.+... ...++.....++.|++.++++.........+
T Consensus 131 --p~~~s~PEt~av~~~~~~~~~~~~ld~Hs~~~~---py~f~~g----~~~~p~~~~~l~~l~~~~~~al~~~~~~f~~ 201 (263)
T cd06234 131 --PSAERSPEVFAVRQRMEETGVDFFLDVHGDEAL---PYNFIAG----SEGVPGWTPRLAALEARFKAALLRASPDFQT 201 (263)
T ss_pred --CCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCC---CccEecc----CCCCCCccHHHHHHHHHHHHHHHHhCccccc
Confidence 158999999999999999999999999999986 8876521 0112333446788888887776554322111
Q ss_pred CCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCC
Q psy7679 356 PEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKF 402 (608)
Q Consensus 356 ~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~ 402 (608)
. | |....+.-+..-|.+.+|.+...+|++||+|+...+.
T Consensus 202 ~------~--~y~~~~~g~~~~~~a~~~~~~~~~~~s~TlEmpf~~~ 240 (263)
T cd06234 202 E------H--GYPKDAPGQANLTIATNWVAHRFDCLSMTLEMPFKDN 240 (263)
T ss_pred c------c--ccCCCCCCchhHHHHHHHHHhhcCceEEEEEeecCCc
Confidence 1 1 1111111133457889999999999999999987543
No 35
>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe
Probab=99.96 E-value=1.3e-29 Score=268.40 Aligned_cols=179 Identities=29% Similarity=0.446 Sum_probs=138.8
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC------Ccceeeeec--cceEEEecCCCCcccccc
Q psy7679 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT------NKNKVSIIS--LYRLVTVSTTPAPIEEDI 106 (608)
Q Consensus 35 ~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~------~~~~v~~~~--hare~~~~~~~~~~~~~l 106 (608)
+||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||++ .++.+++++ |+|||++.....++++.|
T Consensus 4 ~Yh~y~e~~~~L~~l~~~~p~i~~l~~IG~S~eGR~I~~l~Is~~~~~~~~~kP~v~i~g~iHg~E~ig~~~~l~l~~~L 83 (402)
T cd03865 4 EYHRYPELREALVSVWLQCPSISRIYTVGRSFEGRELLVIEMSDNPGEHEPGEPEFKYIGNMHGNEAVGRELLIYLAQYL 83 (402)
T ss_pred ccCCHHHHHHHHHHHHHHCCCceEEEecccccCCCeEEEEEeecCCCCCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999863 477899988 999999765555444444
Q ss_pred ccccccccccccccCC-CHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce--------eEEeCC
Q psy7679 107 KKNKYGFIIPVQFSHH-NYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL--------ARFVGR 177 (608)
Q Consensus 107 ~~~~~~~~~~~~~~y~-~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~--------~~~~g~ 177 (608)
+. .|. ..+.+.++| ++.+++ ++|+.||||++.. .|..+|
T Consensus 84 ~~-----------~y~~~d~~v~~LL--------------------d~~~i~-IvP~~NPDG~e~~~~~~~~~~~w~~~R 131 (402)
T cd03865 84 CN-----------EYQKGNETIINLI--------------------HSTRIH-IMPSLNPDGFEKAASQPGELKDWFVGR 131 (402)
T ss_pred HH-----------hcccCCHHHHHHH--------------------hcCEEE-EEeeeCCchHHhhhhcCccccchhhhc
Confidence 33 111 122233333 455566 4599999999853 467789
Q ss_pred CCCcccccCCCCCCCcCC----CCc-cc------ccCCC---CCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCC
Q psy7679 178 NNANGVDLNRNFPDQFDS----SSE-RR------EQPLN---VKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFD 243 (608)
Q Consensus 178 ~ha~evdLNRNf~~~w~~----~~~-~~------~~~G~---~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpD 243 (608)
.+|+|+|||||||+.+.. ... +. .+++. ....||||+|+++|+++.+|+++.++|||++|..|++|
T Consensus 132 ~Na~GvDLNRNFp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pEt~Avm~w~~~~~FvlsanlHgG~lva~YP~D 211 (402)
T cd03865 132 SNAQGIDLNRNFPDLDRIVYVNEREGGPNNHLLKNMKKAVDENTKLAPETKAVIHWIMDIPFVLSANLHGGDLVANYPYD 211 (402)
T ss_pred ccccCcccCCCCCcccchhhhhhccCCCccccccccccccccccCCChHHHHHHHHHHhCCcEEEEEccCccEEEECCCC
Confidence 999999999999987431 111 11 11121 12568999999999999999999999999999999999
Q ss_pred CC
Q psy7679 244 DS 245 (608)
Q Consensus 244 G~ 245 (608)
..
T Consensus 212 ~~ 213 (402)
T cd03865 212 ET 213 (402)
T ss_pred CC
Confidence 84
No 36
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=99.96 E-value=1.6e-29 Score=267.53 Aligned_cols=170 Identities=34% Similarity=0.506 Sum_probs=141.6
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC------Ccceeeeec--cceEEEecCCCCcccccc
Q psy7679 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT------NKNKVSIIS--LYRLVTVSTTPAPIEEDI 106 (608)
Q Consensus 35 ~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~------~~~~v~~~~--hare~~~~~~~~~~~~~l 106 (608)
+||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||++ +++++++.+ |+|||+++....++++.|
T Consensus 5 ~~h~y~ei~~~l~~l~~~~P~i~~l~~IG~S~eGR~I~~l~Is~~~~~~~~~kp~v~~~g~iHg~E~ig~~~~l~li~~L 84 (375)
T cd03863 5 RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEPGEPEFKYIGNMHGNEVVGRELLLNLIEYL 84 (375)
T ss_pred ccCCHHHHHHHHHHHHHHCCCcEEEEEcccCCccceEEEEEEecCCCcccCCCCeEEEEccccCCcHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999863 578899988 999999776666665555
Q ss_pred ccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce-----eEEeCCCCCc
Q psy7679 107 KKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL-----ARFVGRNNAN 181 (608)
Q Consensus 107 ~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~-----~~~~g~~ha~ 181 (608)
+. .|.+..++..+| ++.+++ ++|+.||||++.. .|..++.+++
T Consensus 85 ~~-----------~y~~d~~v~~ll--------------------~~~~i~-IvP~~NPDG~e~~~~~~~~~~~~R~n~~ 132 (375)
T cd03863 85 CK-----------NFGTDPEVTDLV--------------------QSTRIH-IMPSMNPDGYEKSQEGDRGGTVGRNNSN 132 (375)
T ss_pred HH-----------hccCCHHHHHHH--------------------hCCEEE-EEeccCCchHHheecCCcccccccccCC
Confidence 44 233333444443 444566 5699999999876 5677899999
Q ss_pred ccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCC
Q psy7679 182 GVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDS 245 (608)
Q Consensus 182 evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~ 245 (608)
|+|||||||+.|... ...+||||+|+++|+.+.+|..++++|||+.+.+|++|..
T Consensus 133 GVDLNRNfp~~~~~~---------~~~~EpEt~Av~~~~~~~~f~l~~~lHsg~~~~~yPy~~~ 187 (375)
T cd03863 133 NYDLNRNFPDQFFQV---------TDPPQPETLAVMSWLKSYPFVLSANLHGGSLVVNYPFDDD 187 (375)
T ss_pred CcccccCCccccccC---------CCCCcHHHHHHHHHHhhCCceEEEEecCCCEEEEccCcCC
Confidence 999999999999732 2356999999999999999999999999999999999973
No 37
>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.96 E-value=2e-28 Score=248.60 Aligned_cols=192 Identities=19% Similarity=0.264 Sum_probs=147.1
Q ss_pred CeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC--------C
Q psy7679 153 KRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN--------P 224 (608)
Q Consensus 153 gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~--------~ 224 (608)
..+|+++.++. ++..++.+++.|++||+|+. |... ++.+++.+... .
T Consensus 9 ~~pi~~v~ig~-~~~~~p~v~i~~giHg~E~i--------------g~~~----------~l~~l~~L~~~~~~d~~~~~ 63 (273)
T cd03862 9 RFPIYALELGS-PDPKAPVLGLVGGVHGLERI--------------GTQV----------LLAFLESLLERLRWDKLLQE 63 (273)
T ss_pred cceeEEEEecC-CCCCCCEEEEEcCcCCCcHH--------------HHHH----------HHHHHHHHHHhccccHHHHH
Confidence 45678777654 44456889999999999999 7655 56666666531 4
Q ss_pred ceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCC-------------CCCC------CCCCcHH
Q psy7679 225 FVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFG-------------PSKY------NSVPEPE 285 (608)
Q Consensus 225 ~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~-------------~~~~------~~~sepE 285 (608)
++++++++ |||++||||. |+++|.|++|||||||||+.|. +|.+ .|+||||
T Consensus 64 ll~~~~i~---ivP~vNPdG~-------~~~~R~n~~GVDLNRNfp~~~~~~~~~~~~G~~~~p~~~~Y~G~~~~~sEpE 133 (273)
T cd03862 64 LLEKVRLV---FLPLVNPVGM-------ALKTRSNGNGVDLMRNAPVDAEDKPPFLVGGQRLSPRLPWYRGKNGAGMELE 133 (273)
T ss_pred HHhCCeEE---EEeccCcCHH-------HhcccCCCCCcccCCCCCCCccccccccccCccCCCCCCCCCCCCCCCCCHH
Confidence 78899999 9999999994 5688999999999999999985 2332 2799999
Q ss_pred HHHHHHHHHhC----CcEEEEEEccc---ceeeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCC
Q psy7679 286 TLAVEKWLQDI----PFVLSANLHGG---SLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEY 358 (608)
Q Consensus 286 t~ai~~~~~~~----~~~~~~~~Hs~---~~~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~ 358 (608)
|+||+++++++ ++++++|+||+ ++.++|||+++.. +.++.+.+..+++.+.++++.
T Consensus 134 t~al~~~~~~~~~~~~~~~~ld~HSg~G~~~~i~~Pyg~~~~-------~~~~~~~~~~l~~~~~~~~~~---------- 196 (273)
T cd03862 134 AQALCRFVRELLFESPFSIALDCHSGFGLVDRIWFPYAYTKE-------PIPHLAEIYALKELLERTYPN---------- 196 (273)
T ss_pred HHHHHHHHHHhcccCCeEEEEEECCCCCccCEEEcCCcCCCC-------CCCCHHHHHHHHHHHHHhCCC----------
Confidence 99999999986 68999999995 3799999999743 456778888888876554311
Q ss_pred CCCCCCCcccccceeeeccCcccchhhhccC-------eEEEEEeecCC
Q psy7679 359 PEENFPGGIVNGAQWYVVSGGMQDYNYIHAN-------TLEITLELGCY 400 (608)
Q Consensus 359 ~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~-------~~~~t~El~~~ 400 (608)
..|..|.. +..|.++|++.||+|...+ .++||+|+|.-
T Consensus 197 --~~Y~~g~~--s~~Y~a~G~~~D~~y~~~~~~~~~~~~l~~TlE~Gt~ 241 (273)
T cd03862 197 --HVYRFEPQ--SRHYLTHGDLWDYLYDQHQKQQPNGRFLPLTLEMGSW 241 (273)
T ss_pred --CceEECCc--ceeEECCCCHHHHHHhhcCcccccccceeEEEEeecc
Confidence 01222211 2369999999999996433 47999999984
No 38
>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p
Probab=99.95 E-value=1.1e-28 Score=263.35 Aligned_cols=172 Identities=35% Similarity=0.619 Sum_probs=141.4
Q ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC------Ccceeeeec--cceEEEecCCCCccccccc
Q psy7679 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT------NKNKVSIIS--LYRLVTVSTTPAPIEEDIK 107 (608)
Q Consensus 36 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~------~~~~v~~~~--hare~~~~~~~~~~~~~l~ 107 (608)
||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||+. .|+++++.+ |+|||+++..+.++++.|+
T Consensus 1 Y~~y~ei~~~l~~l~~~~p~~~~l~~iG~S~eGR~i~~l~is~~~~~~~~~kp~v~~~~~iH~~E~ig~~~~l~l~~~L~ 80 (372)
T cd03868 1 YHHYEELTDLLHSLAKKYPNIARLHSIGRSVEGRELWVLRITDNVNRREPGEPMFKYVGNMHGDETVGRQVLIYLAQYLL 80 (372)
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEeccccCCCceEEEEEEecCCCCCCCCCCeEEEECCcCCCcHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999864 367899988 9999998776666555554
Q ss_pred cccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce-------eEEeCCCCC
Q psy7679 108 KNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL-------ARFVGRNNA 180 (608)
Q Consensus 108 ~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~-------~~~~g~~ha 180 (608)
. .|.+..++.++| ++.+++ ++|+.||||++.. .|..++.+|
T Consensus 81 ~-----------~y~~d~~~~~ll--------------------~~~~~~-ivP~~NPDG~~~~~~~~~~~~~~~~R~n~ 128 (372)
T cd03868 81 E-----------NYGGDERVTELV--------------------NTTDIY-LMPSMNPDGFERSQEGDCSCGGYGGRENA 128 (372)
T ss_pred H-----------hcccCHHHHHHH--------------------hCCEEE-EEeeeCCchHHhhcccCccccCCCccCCC
Confidence 4 122223333333 444566 5599999999764 344567899
Q ss_pred cccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCC
Q psy7679 181 NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDS 245 (608)
Q Consensus 181 ~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~ 245 (608)
+|+|||||||+.|+.... +.|+||||++++++|+.+.+|...+++|||+.+.+|++|..
T Consensus 129 ~GvDLNRnf~~~~~~~~~------~~~~sepEt~av~~~~~~~~~~l~~~lH~~~~~~~yP~~~~ 187 (372)
T cd03868 129 NNVDLNRNFPDQFEGKLQ------RLSERQPETVAMMKWIRSNPFVLSGNLHGGSVVASYPYDDS 187 (372)
T ss_pred CCccCCCCCCcccCCcCC------CCCCCCHHHHHHHHHHhhCCcEEEEEccCccEEEecccccc
Confidence 999999999999975321 67899999999999999999999999999999999999873
No 39
>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu
Probab=99.95 E-value=1.1e-28 Score=262.46 Aligned_cols=179 Identities=34% Similarity=0.481 Sum_probs=136.7
Q ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC------Ccceeeeec--cceEEEecCCCCccccccc
Q psy7679 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT------NKNKVSIIS--LYRLVTVSTTPAPIEEDIK 107 (608)
Q Consensus 36 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~------~~~~v~~~~--hare~~~~~~~~~~~~~l~ 107 (608)
||+|+||.++|++|+++||+++++.+||+|+|||+|++|+||+. .++++++.+ |+|||++.....
T Consensus 1 ~h~y~em~~~L~~l~~~yP~i~~l~sIG~SveGR~i~~l~is~~~~~~~~~kp~v~~~g~iHg~E~ig~e~ll------- 73 (392)
T cd03864 1 HHRYDDLVRALYAVQNECPYITRIYSIGRSVEGRHLYVLEFSDNPGIHEPLEPEFKYVGNMHGNEVLGRELLI------- 73 (392)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEEeeeccCCceEEEEEecCCCccccCCCCEEEEEcccCCCcHHHHHHHH-------
Confidence 79999999999999999999999999999999999999999874 257888888 999999654433
Q ss_pred cccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCcccee--------EEeCCCC
Q psy7679 108 KNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLA--------RFVGRNN 179 (608)
Q Consensus 108 ~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~--------~~~g~~h 179 (608)
.+++.|+..|..-. ..+.+.++..+|+ ++|+.||||++... +..++.|
T Consensus 74 ---------------------~l~~~L~~~y~~~d--~~v~~lL~~~~i~-ivP~~NPDG~e~~~~~~~~~~~~~~~R~N 129 (392)
T cd03864 74 ---------------------QLSEFLCEEYRNGN--ERITRLIQDTRIH-ILPSMNPDGYEVAARQGPEFNGYLVGRNN 129 (392)
T ss_pred ---------------------HHHHHHHHhcccCC--HHHHHHHhcCeEE-EEeeeCCchHHhhhccCCCcCcccccccc
Confidence 34444443331100 0011122455677 45999999997642 3457889
Q ss_pred CcccccCCCCCCCcCCC-----Ccccc--cC---CCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCC
Q psy7679 180 ANGVDLNRNFPDQFDSS-----SERRE--QP---LNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDS 245 (608)
Q Consensus 180 a~evdLNRNf~~~w~~~-----~~~~~--~~---G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~ 245 (608)
|+|||||||||+.|... ..|.. .+ ...+++||||+|+++|+++.+|+.++++|||+++..|++|..
T Consensus 130 a~GVDLNRNFp~~~~~~~~~~~~~g~~~~~P~~~~~~~~~epET~Av~~~~~~~~fvls~nlHgG~~v~~YPyd~~ 205 (392)
T cd03864 130 ANGVDLNRNFPDLNTLMYYNEKYGGPNHHLPLPDNWKSQVEPETLAVIQWMQNYNFVLSANLHGGAVVANYPYDKS 205 (392)
T ss_pred ccCcccccCCCcccccchhhhccCCccccCCCccccccccCHHHHHHHHHHHhcCcEEEEEccCCceeeeCCcccc
Confidence 99999999999886411 01111 11 124789999999999999999999999999999999999984
No 40
>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.
Probab=99.95 E-value=1.1e-28 Score=264.24 Aligned_cols=178 Identities=26% Similarity=0.376 Sum_probs=140.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC------Ccceeeeec--cceEEEecCCCCccccccc
Q psy7679 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT------NKNKVSIIS--LYRLVTVSTTPAPIEEDIK 107 (608)
Q Consensus 36 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~------~~~~v~~~~--hare~~~~~~~~~~~~~l~ 107 (608)
||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||+. .+++|++++ |+|||+++....+++..|+
T Consensus 1 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~EGR~i~~l~is~~~~~~~~~kp~v~i~~giHg~E~ig~~~~~~l~~~L~ 80 (395)
T cd03867 1 HHSYSQMVSVLKRTAARCSHIARTYSIGRSFEGRDLLVIEFSSNPGQHELLEPEVKYIGNMHGNEVLGRELLIYLAQFLC 80 (395)
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEccccCCCceEEEEEeccCCCcccccCCeEEEEccccCCcHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999863 257899988 9999998776666555554
Q ss_pred cccccccccccccCC-CHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce--------eEEeCCC
Q psy7679 108 KNKYGFIIPVQFSHH-NYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL--------ARFVGRN 178 (608)
Q Consensus 108 ~~~~~~~~~~~~~y~-~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~--------~~~~g~~ 178 (608)
. .|. ..+++..+| ++.+++ ++|+.||||++.. .|..++.
T Consensus 81 ~-----------~~~~~d~~v~~ll--------------------~~~~i~-ivP~~NPDG~e~~~~~~~~~~~wr~~R~ 128 (395)
T cd03867 81 S-----------EYLLGNQRIQTLI--------------------NTTRIH-LLPSMNPDGYEAAASEGAGYNGWTNGRQ 128 (395)
T ss_pred H-----------hhhcCCHHHHHHh--------------------hCcEEE-EEeccCCchHHhhhhcCccccccccCCc
Confidence 3 111 122333333 444555 5699999999863 4677899
Q ss_pred CCcccccCCCCCCCcCCCC-----cccc-cCCC------CCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCC
Q psy7679 179 NANGVDLNRNFPDQFDSSS-----ERRE-QPLN------VKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDS 245 (608)
Q Consensus 179 ha~evdLNRNf~~~w~~~~-----~~~~-~~G~------~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~ 245 (608)
+|+|+|||||||+.|.... .|.. ..++ .++|||||+|+++|+++.+|...+++|||+.+.+||+|.-
T Consensus 129 n~~GvDLNRNf~~~~~~~~~~~~~~g~~~~~~p~p~~~~~~~sepEt~Av~~~~~~~~~~l~~s~Hs~~~~~~yP~~~t 207 (395)
T cd03867 129 NAQNIDLNRNFPDLTSEVYRRRRQRGARTDHIPIPDSYWFGKVAPETKAVMKWMRSIPFVLSASLHGGDLVVSYPYDFS 207 (395)
T ss_pred CCCCcccccCCCcchhhhcchhhcccccccCCCCccccccCccCHHHHHHHHHHhhCCceEEEEccCcceeEEcccccc
Confidence 9999999999999996321 1111 1122 2469999999999999999999999999999999999873
No 41
>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.
Probab=99.95 E-value=8.1e-28 Score=249.03 Aligned_cols=179 Identities=25% Similarity=0.276 Sum_probs=142.7
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC-----Ccceeeeec--cceEEEecCCCCcccccc
Q psy7679 34 PHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT-----NKNKVSIIS--LYRLVTVSTTPAPIEEDI 106 (608)
Q Consensus 34 ~~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~-----~~~~v~~~~--hare~~~~~~~~~~~~~l 106 (608)
..||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++. .|+.+++.+ |+|||+++....+++..|
T Consensus 2 ~~y~~y~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~~~~~~kp~i~i~~~iH~~E~~g~~~~l~~i~~L 81 (295)
T cd03859 2 RGYHNYLEMVDELNAAAAAYPNLTKVKSIGKSYEGRDIIAVKISDNVATDENKPEVLYTSTHHAREWLSLEMAIYLMHYL 81 (295)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCceEEEeeeecCCCCeEEEEEEecCCCCCCCCCEEEEECCcCccchhhHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999864 357888888 999999877766666665
Q ss_pred ccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCcccee-------EEeCC--
Q psy7679 107 KKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLA-------RFVGR-- 177 (608)
Q Consensus 107 ~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~-------~~~g~-- 177 (608)
+. .|.+..++.++|+ ...++ ++|+.||||++... |...+
T Consensus 82 ~~-----------~~~~d~~~~~lL~--------------------~~~i~-ivP~~NPDG~~~~~~~~~~~~wrkn~~~ 129 (295)
T cd03859 82 LE-----------NYGKDPRIQNLVD--------------------NRELW-FVPVVNPDGYEYDETTGGYRSWRKNRRD 129 (295)
T ss_pred HH-----------hhccCHHHHHHHh--------------------cCeEE-EEeeeCCCcceEEeeccCccceeccCCC
Confidence 54 1222233444433 33455 56999999998542 32211
Q ss_pred -----CCCcccccCCCCCCCcCCC-------CcccccCCCCCCchHHHHHHHHHHhcC-CceeeceeeeeeeeeecCCCC
Q psy7679 178 -----NNANGVDLNRNFPDQFDSS-------SERREQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 178 -----~ha~evdLNRNf~~~w~~~-------~~~~~~~G~~p~sePEt~al~~~l~~~-~~l~~~~~h~g~ivp~~NpDG 244 (608)
.+|+|||||||||+.|+.. +++..|+|+.|+||||++++++++.+. ++...+++|++.-+.+++++-
T Consensus 130 ~~~~~~~~~GvDLNRNf~~~w~~~~~g~s~~p~~~~y~G~~p~sepEt~av~~~~~~~~~~~~~l~~Hs~g~~i~~P~~~ 209 (295)
T cd03859 130 NSGDISSSDGVDLNRNYGYKWGYDSGGSSNDPSSETYRGPSAFSEPETQAIRDFVESHKNIKTALNYHTYSNLWLYPYGY 209 (295)
T ss_pred CCCCcCcceeecCCCCCCcccCCCCCCCCCCCCCCCccCCCCCchHHHHHHHHHHHhCCCeEEEEEeecCCceEEeCCcC
Confidence 4789999999999999752 223468999999999999999999999 899999999988888888764
No 42
>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont
Probab=99.95 E-value=5.4e-28 Score=256.86 Aligned_cols=169 Identities=33% Similarity=0.524 Sum_probs=139.2
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC------Ccceeeeec--cceEEEecCCCCcccccc
Q psy7679 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT------NKNKVSIIS--LYRLVTVSTTPAPIEEDI 106 (608)
Q Consensus 35 ~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~------~~~~v~~~~--hare~~~~~~~~~~~~~l 106 (608)
+||+|+||.+||++|+++||+++++.+||+|+|||+|++|+||+. .++.+++.+ |+|||+++....+++..|
T Consensus 4 ~Y~~~~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~i~~l~ig~~~~~~~~~~P~v~~~~~iHg~E~ig~~~~l~l~~~L 83 (376)
T cd03866 4 NYHNTEQMEAYLKDVNKNYPSITHLHSIGQSVEGRELWVLVLGRFPREHRIGIPEFKYVANMHGNEVVGRELLLHLIDYL 83 (376)
T ss_pred ccCCHHHHHHHHHHHHHhCCCcEEEEEeeccCCCceEEEEEeccCCccccCCCCeEEEEcccCCCcHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999863 356778877 999999776666555555
Q ss_pred ccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce----eEEeCCCCCcc
Q psy7679 107 KKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL----ARFVGRNNANG 182 (608)
Q Consensus 107 ~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~----~~~~g~~ha~e 182 (608)
+. .|....++..+| ++.+++ ++|+.||||++.. .|..++.+|+|
T Consensus 84 ~~-----------~y~~d~~i~~lL--------------------~~~~i~-ivP~~NPDG~e~~~~~~~~~~~R~N~~G 131 (376)
T cd03866 84 VT-----------SYGSDPVITRLL--------------------NSTRIH-IMPSMNPDGFEASKPDCYYSVGRYNKNG 131 (376)
T ss_pred HH-----------hcCCCHHHHHHH--------------------hCCEEE-EEeccCCchhhhcccccccccccccCCC
Confidence 43 222333444433 344566 5699999999875 56678999999
Q ss_pred cccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCC
Q psy7679 183 VDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 183 vdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG 244 (608)
+|||||||+.|.... ..||||++++++|+.+.+|...+++|||+.+.+|++|.
T Consensus 132 vDLNRnf~~~w~~~~---------~~sepEt~al~~~~~~~~~~l~~~~H~~~~~~~YP~~~ 184 (376)
T cd03866 132 YDLNRNFPDAFEENN---------EQRQPETRAVMEWLKSETFVLSANLHGGALVASYPYDN 184 (376)
T ss_pred cccCcCchhhhccCC---------CCCcHHHHHHHHHHHhcCcEEEEEccCCceEEeccccC
Confidence 999999999997431 23899999999999999999999999999999999986
No 43
>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M
Probab=99.95 E-value=7.4e-27 Score=237.59 Aligned_cols=218 Identities=15% Similarity=0.096 Sum_probs=162.8
Q ss_pred CHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCccccc
Q psy7679 123 NYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQ 202 (608)
Q Consensus 123 ~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~ 202 (608)
+|.....+++.+. ++.+.+.+||+|.+||+|+++.+.. ...++.+|+.+++|++|+. |...
T Consensus 12 ~y~~~~~l~~sl~---~~~v~l~~IG~s~egr~i~~~~~~~--~~~k~~i~i~a~iH~~E~~--------------~~~~ 72 (269)
T cd03856 12 IYDRRLALCESLQ---GNSCDLLTITSPPEGNDIKYEHLCS--FANKKYIFLIARVHPGETN--------------ASWV 72 (269)
T ss_pred CHHHHHHHHHHhc---CCceeEEEeccCCCCccccceeccC--CCCCcEEEEEcCcCCCchH--------------HHHH
Confidence 6677777777774 8889999999999999999876653 3346779999999999999 7665
Q ss_pred CCCCCCchHHHHHHHHHHhcC-----CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCC
Q psy7679 203 PLNVKKLEPETLAMISFIKNN-----PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSK 277 (608)
Q Consensus 203 ~G~~p~sePEt~al~~~l~~~-----~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~ 277 (608)
++.++++|.+. .+++.++++ |||++||||+... ..|.|+.||||||||+.
T Consensus 73 ----------~~~li~~Ll~~~~~~~~ll~~~~~~---ivP~~NPDG~~~g------~~R~n~~G~DLNR~~~~------ 127 (269)
T cd03856 73 ----------MKGFLEFLLSDNPTAQSLRESFVFK---IVPMLNPDGVIRG------NYRCSLSGVDLNRQWQN------ 127 (269)
T ss_pred ----------HHHHHHHHHhCCHHHHHHHhcCeEE---EEeeeCCcccccc------CCcCCCCCCCcCCCCCC------
Confidence 67777777653 488899999 9999999997642 13889999999999973
Q ss_pred CCCCCcHHHHHHHHHHHhC-----CcEEEEEEcccc---eeeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhhccc
Q psy7679 278 YNSVPEPETLAVEKWLQDI-----PFVLSANLHGGS---LVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAHKKM 349 (608)
Q Consensus 278 ~~~~sepEt~ai~~~~~~~-----~~~~~~~~Hs~~---~~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a~~~~~~ 349 (608)
..+++|||++++++++.++ ++++++|+|+++ ++++|.+... .+++....+.+++.++... ..
T Consensus 128 p~~~~~pE~~~~~~~~~~~~~~~~~~~~~idlH~~~~~~~~f~yG~~~~---------~~~~~~~~~~~~~~~~~~~-~~ 197 (269)
T cd03856 128 PSPDLHPEIYLVKGLMLYLAAGKRGVLFYCDFHGHSRKKNVFMYGCSFK---------DEVWDQGYRIIPKMLSQNA-PL 197 (269)
T ss_pred CCCCCCCCHHHHHHHHHHHHhccCCceEEEEecCCCccCceEeecCCCc---------hhhhhhHHHHHHHHHHhhC-hh
Confidence 2589999999999999988 799999999999 7777444321 2334444444554432211 11
Q ss_pred cCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCe-EEEEEeecCCCC
Q psy7679 350 YKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANT-LEITLELGCYKF 402 (608)
Q Consensus 350 ~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~-~~~t~El~~~~~ 402 (608)
.....| .|..+... ..|++.|++.||+|...++ ++||+|++.++.
T Consensus 198 ~~~~~~------~f~~~~~~--~~~~~~gtsr~~~~~~~~i~~syTlE~~~~g~ 243 (269)
T cd03856 198 FCMFGC------SFKVEKSK--ASDPDRGTGRVVVAKQIKVQHSYTMEVTFNGN 243 (269)
T ss_pred hhhcCC------CcCCCcCC--cccCCCChHHHHHHHhcCCcEEEEEecCCCCc
Confidence 122233 34444433 2588999999999965555 999999998765
No 44
>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring
Probab=99.94 E-value=9e-27 Score=227.68 Aligned_cols=190 Identities=36% Similarity=0.550 Sum_probs=157.5
Q ss_pred eEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC-----CceeeceeeeeeeeeecCCCCCc
Q psy7679 172 ARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-----PFVLSGNLHGGAIVASYPFDDSK 246 (608)
Q Consensus 172 ~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~-----~~l~~~~~h~g~ivp~~NpDG~~ 246 (608)
+++.+++||+|+. |... ++.+++.++.. .++...+++ ++|++||||+.
T Consensus 1 v~i~ag~Hg~E~~--------------g~~~----------~~~~~~~l~~~~~~~~~l~~~~~i~---iiP~~NPdG~~ 53 (196)
T cd00596 1 VLIIAGIHGNETI--------------GVEA----------ALALLRRLLSNYGRDTKLLENGRLL---VVPVLNPDGYE 53 (196)
T ss_pred CEEECCcCCCcHH--------------HHHH----------HHHHHHHHHHcCcchHHHHhCCeEE---EEeCcccccce
Confidence 4788999999999 8655 56666666554 367899999 99999999976
Q ss_pred cCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCCCCCC
Q psy7679 247 CLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMKPQVD 326 (608)
Q Consensus 247 ~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~ 326 (608)
.. ..|.|..|+|||||||..|.. .+++|||++++++++.++++++++|+|+++..++|||++...
T Consensus 54 ~~------~~R~n~~g~DlNR~f~~~~~~---~~~~~~e~~~~~~~~~~~~~~~~idlH~~~~~~~~p~~~~~~------ 118 (196)
T cd00596 54 AV------NWRKNANGVDLNRNFPGLWGK---GPLSEPETRALAELIQQRKVDLYIDLHSGSLGVLYPYSHSDT------ 118 (196)
T ss_pred ee------eEEeCCCCcCccCCCCCcccC---CCCCcHHHHHHHHHHHhCCceEEEEEecCCceEEecCCCCCC------
Confidence 42 247788899999999998875 378999999999999999999999999999999999998753
Q ss_pred CCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCCCCCC
Q psy7679 327 SPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPAK 406 (608)
Q Consensus 327 ~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~P~~~ 406 (608)
+.+|...++.+|+.++..+.. . ..+......+|+..|++.||+|...++++||+|+++++.|+.+
T Consensus 119 -~~~~~~~~~~~a~~~~~~~~~-----~---------~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~tiE~g~~~~~~~~ 183 (196)
T cd00596 119 -PPPDAEIPKALAQLLADAARG-----S---------KYGVGFGAKWYETGGGFDDWAYGNHGCPSFTIELGGQGYPPEE 183 (196)
T ss_pred -CCCCHHHHHHHHHHHHHhccC-----C---------CCceeecceEEEcCCchhhhhhhCCCcEEEEEEeCCCCCCCHH
Confidence 347899999999998876541 1 1122233445899999999999889999999999999999888
Q ss_pred CcchHHHhhhhh
Q psy7679 407 DLPSYWEDNLPA 418 (608)
Q Consensus 407 ~l~~~w~~N~~a 418 (608)
++...|++++.+
T Consensus 184 ~~~~~~~~~~~~ 195 (196)
T cd00596 184 ELPSRGEENKEA 195 (196)
T ss_pred HHHHHHHHHHhh
Confidence 888989888765
No 45
>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.94 E-value=2.6e-27 Score=240.79 Aligned_cols=176 Identities=19% Similarity=0.217 Sum_probs=142.3
Q ss_pred CCC-HHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC-----Ccceeeeec--cceEEEecCCCCccccccc
Q psy7679 36 YLS-FDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT-----NKNKVSIIS--LYRLVTVSTTPAPIEEDIK 107 (608)
Q Consensus 36 y~~-y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~-----~~~~v~~~~--hare~~~~~~~~~~~~~l~ 107 (608)
||+ ++||.+||++|+++||+ +++.+||+|+|||+|++|+|++. +|+++++.+ |||||+++....+++.+|+
T Consensus 2 Yh~~~~ei~~~l~~l~~~~p~-~~~~~ig~S~egr~i~~i~~~~~~~~~~~k~~i~i~agiHarE~i~~~~~l~li~~L~ 80 (272)
T cd06227 2 YHTATDEINEEADALVKNIRL-SRLGELIESVKVRNFSSITLNPNGDPSKKKVKALLLFGEHARELISPETGLHLLSNLC 80 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCC-cEEeeeeeccCCceeeEEEecCCCCCCCCCCEEEEECCccCCchhhHHHHHHHHHHHH
Confidence 899 99999999999999999 89999999999999999999864 367788887 9999998877777766665
Q ss_pred cccccccccccccCCC----HHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCcccee--EEeCCCCCc
Q psy7679 108 KNKYGFIIPVQFSHHN----YTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLA--RFVGRNNAN 181 (608)
Q Consensus 108 ~~~~~~~~~~~~~y~~----~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~--~~~g~~ha~ 181 (608)
.. |.. .+++.++|++ .+++ ++|+.||||++... ....+.+++
T Consensus 81 ~~-----------~~~~~~~~~~~~~lL~~--------------------~~i~-ivP~~NPDG~~~~~~~~~~wR~N~~ 128 (272)
T cd06227 81 GE-----------LAETFDWGDLLKNILDN--------------------FDLK-IIPNENPDGRKKVESGNYCLRENEN 128 (272)
T ss_pred Hh-----------cccccchhHHHHHHHhc--------------------CcEE-EEeccCCchheeEeccCcccccCCc
Confidence 51 111 1234444433 3455 56999999988741 123578899
Q ss_pred ccccCCCCCCCcCCCC---cccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCC
Q psy7679 182 GVDLNRNFPDQFDSSS---ERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 182 evdLNRNf~~~w~~~~---~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG 244 (608)
|||||||||+.|+... ....++|+.|+||||++++++++.+.++...+++|++..+.+++++.
T Consensus 129 GVDLNRNf~~~w~~~~~~~~~~~y~G~~~~sEpEt~av~~~~~~~~~~~~i~~Hs~~~~i~~P~~~ 194 (272)
T cd06227 129 GVDLNRNYGADWGFKEDDYEDEEYSGPAPFSEPETRVLRDLLTSFSPDVFLSVHSGTLALFTPYAY 194 (272)
T ss_pred cccccccCCcccccCCCCccccccCCCCCCCcHHHHHHHHHHHhCCCeEEEEeccCCCEEEecCCC
Confidence 9999999999997542 34468999999999999999999999999999999988888888765
No 46
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr
Probab=99.94 E-value=2.7e-27 Score=253.46 Aligned_cols=174 Identities=35% Similarity=0.546 Sum_probs=144.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC------Ccceeeeec--cceEEEecCCCCccccccc
Q psy7679 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT------NKNKVSIIS--LYRLVTVSTTPAPIEEDIK 107 (608)
Q Consensus 36 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~------~~~~v~~~~--hare~~~~~~~~~~~~~l~ 107 (608)
||+|+||.+||++|+++||+++++.+||+|+|||+|++++||++ .|+.+++.+ |+|||+++..+.++++.|+
T Consensus 1 Y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~agiH~~E~~g~~~~~~l~~~L~ 80 (374)
T cd03858 1 YHNYAELESFLKEVAANYPNITRLYSIGKSVQGRDLWVLEISDNPGVHEPGEPEFKYVGNMHGNEVVGRELLLRLAQYLC 80 (374)
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccCCCCCEEEEEEEecCCCCCCCCCceEEEeccccCCchhHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999864 367888888 9999998777666666554
Q ss_pred cccccccccccccCC-CHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce-----eEEeCCCCCc
Q psy7679 108 KNKYGFIIPVQFSHH-NYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL-----ARFVGRNNAN 181 (608)
Q Consensus 108 ~~~~~~~~~~~~~y~-~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~-----~~~~g~~ha~ 181 (608)
. .|. +...+.++| ++..++ ++|+.||||++.. .|...+.+++
T Consensus 81 ~-----------~~~~~d~~~~~ll--------------------~~~~~~-ivP~~NPDG~~~~~~~~~~w~~~R~n~~ 128 (374)
T cd03858 81 E-----------NYGAGDPRITRLV--------------------DNTRIH-IMPSMNPDGYEKAAEGDCGGLTGRYNAN 128 (374)
T ss_pred H-----------HhccCCHHHHHHH--------------------hCCEEE-EEcccCCchhhhhcccCCcccccCCCCc
Confidence 4 122 223333333 334455 5699999999874 5667888999
Q ss_pred ccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCC
Q psy7679 182 GVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDS 245 (608)
Q Consensus 182 evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~ 245 (608)
|+|||||||+.|..... +|+.|+||||++++++++.+.++...+++|+|..+.+|++|..
T Consensus 129 GvDLNRnf~~~~~~~~~----~G~~~~sepEt~al~~~~~~~~~~~~i~~Hs~~~~~~yp~~~~ 188 (374)
T cd03858 129 GVDLNRNFPDLFFTNYR----SSDNGPRQPETKAVMNWIKSIPFVLSANLHGGALVANYPYDDS 188 (374)
T ss_pred ceecccCCCcccccccc----cCCCcccCHHHHHHHHHHhhCCceEEEEccCCceEEEcccccC
Confidence 99999999999975422 7999999999999999999999999999999999999998874
No 47
>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=99.94 E-value=3.2e-26 Score=230.57 Aligned_cols=213 Identities=19% Similarity=0.164 Sum_probs=162.8
Q ss_pred HHHHHHhCCCceeeeeccccccCeEEEEEEeeCCC----CCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCC
Q psy7679 131 LEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEE----GSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNV 206 (608)
Q Consensus 131 L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~np----dg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~ 206 (608)
|+.|+..+|+++++..||+|++||+|++++++.++ +..++.+|+.+++|++|+. +...
T Consensus 1 l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~It~~~~~~~~~~k~~I~i~ariHp~E~~--------------~s~~---- 62 (261)
T cd06908 1 LDALEKRSLDYFRREQLGQSVQKRRLDLLTIDSPDNLREDSEKKVIFITARVHPGESP--------------SSYV---- 62 (261)
T ss_pred ChHHHhhCCCcEEEEEeEEcCCCCeeEEEEEcCCCccccCCCCcEEEEECCcCCCChH--------------HHHH----
Confidence 46788899999999999999999999999998753 2456779999999999999 7665
Q ss_pred CCchHHHHHHHHHHhcC-----CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCC
Q psy7679 207 KKLEPETLAMISFIKNN-----PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSV 281 (608)
Q Consensus 207 p~sePEt~al~~~l~~~-----~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~ 281 (608)
++.++++|.+. .+++.++++ ||||+||||+... ..|.||.|+||||||+. ..++
T Consensus 63 ------~~~li~~L~~~~~~~~~L~~~~~~~---IvP~~NPDGv~~g------n~R~~~~G~DLNR~w~~------p~~~ 121 (261)
T cd06908 63 ------CQGLIDFLVSNHPIAKVLREHLVFK---IVPMLNPDGVFLG------NYRCSLMGHDLNRHWHD------PSPW 121 (261)
T ss_pred ------HHHHHHHHhhCCHHHHHHHHhCcEE---EEeeecCcceeec------CCcCcCcCcCCCCCCCC------CCcc
Confidence 67788888764 478899999 9999999998743 35899999999999973 2589
Q ss_pred CcHHHHHHHHHHHhC------CcEEEEEEcccceee-eecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhhccccCCCC
Q psy7679 282 PEPETLAVEKWLQDI------PFVLSANLHGGSLVA-NYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAHKKMYKDPG 354 (608)
Q Consensus 282 sepEt~ai~~~~~~~------~~~~~~~~Hs~~~~i-~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~ 354 (608)
+|||++++++++++. ++++++|+|++++.. +|||++..+ .+++....+.+.+.++...+.. .-..
T Consensus 122 ~~PEv~av~~~i~~~~~~~~~~i~~~lD~H~hs~~~~~F~yG~~~~-------~~~~~~~~~~fp~~l~~~~~~F-~~~~ 193 (261)
T cd06908 122 AHPTLHAVKNLLKELDNDSTTQLDFYIDLHAHSSLMNCFIYGNTYD-------DVYRYERQLVFPKLLAQNAEDF-SMEH 193 (261)
T ss_pred cChHHHHHHHHHHHhhhccccCeeEEEEeeccccccceeeccccCC-------ccccHHHHHHHHHHHHHhCHHh-cccC
Confidence 999999999999885 678999999999998 899998643 2344554455555555443322 2223
Q ss_pred CCCCCCCCCCCcccccceeeeccCcccchhhhccCe--EEEEEeecCCCCC
Q psy7679 355 CPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANT--LEITLELGCYKFP 403 (608)
Q Consensus 355 ~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~--~~~t~El~~~~~P 403 (608)
|. |.... ...|+..=|.+...++ .+||+|++-+++.
T Consensus 194 ~~------f~~~~-------~k~gtar~~~~~~~~~~~~s~TlE~sf~g~~ 231 (261)
T cd06908 194 TM------FNRDA-------VKAGTGRRFLGSLLSDNVNCYTLEVSFYGYN 231 (261)
T ss_pred Cc------ccCCC-------CCCChHHHHHHHHhCCCceEEEEeecCCccc
Confidence 31 21000 1125566688877765 9999999987764
No 48
>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the
Probab=99.93 E-value=3.3e-26 Score=237.12 Aligned_cols=174 Identities=21% Similarity=0.253 Sum_probs=137.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCCC---cceeeeec--cceEEEecCCCCcccccccccc
Q psy7679 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGTN---KNKVSIIS--LYRLVTVSTTPAPIEEDIKKNK 110 (608)
Q Consensus 36 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~~---~~~v~~~~--hare~~~~~~~~~~~~~l~~~~ 110 (608)
||+|+||.+||++|+++||+++++.+||+|+|||+|++|+|++.. ++.+++.+ |+|||+++....++++.|+..
T Consensus 1 Y~ty~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~~~~~k~~v~i~~~~Hg~E~~g~~~~~~~~~~L~~~- 79 (294)
T cd03860 1 YHTYDEIYAWLDELAQKYPDLVTVETIGRSYEGRPIKGVKISNGGRSNKPAIFIDAGIHAREWISPATALYIINQLVES- 79 (294)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEeeeeCCCCCeEEEEEEecCCCCCCcEEEEECCcCcCccccHHHHHHHHHHHHHc-
Confidence 899999999999999999999999999999999999999999763 67788887 999999766655555554430
Q ss_pred ccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce-----eEEeCC-----CCC
Q psy7679 111 YGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL-----ARFVGR-----NNA 180 (608)
Q Consensus 111 ~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~-----~~~~g~-----~ha 180 (608)
+. .++..+| ++..++ ++|+.||||++.. .|...+ .+|
T Consensus 80 ----------~~--~~~~~ll--------------------~~~~i~-iiP~~NPDG~~~~~~~~~~wrknr~~~~~~~~ 126 (294)
T cd03860 80 ----------YD--PEVTDLL--------------------DNYDWY-ILPVANPDGYEYTHTTDRLWRKNRSPNSGGGC 126 (294)
T ss_pred ----------cC--HHHHHHH--------------------HcCeEE-EEeeecCCchhhhccccchhcccCCCCCCCCc
Confidence 00 1222222 334465 5599999998754 343322 458
Q ss_pred cccccCCCCCCCcCCC-----CcccccCCCCCCchHHHHHHHHHHhcC--CceeeceeeeeeeeeecCCC
Q psy7679 181 NGVDLNRNFPDQFDSS-----SERREQPLNVKKLEPETLAMISFIKNN--PFVLSGNLHGGAIVASYPFD 243 (608)
Q Consensus 181 ~evdLNRNf~~~w~~~-----~~~~~~~G~~p~sePEt~al~~~l~~~--~~l~~~~~h~g~ivp~~NpD 243 (608)
+|+|||||||..|+.. +++..++|+.|+||||++++++++.+. ++...+++|++.-+.+++++
T Consensus 127 ~GvDLNRnf~~~w~~~~~~~~p~~~~y~G~~~~sepEt~al~~~~~~~~~~~~~~ld~Hs~~~~i~~P~~ 196 (294)
T cd03860 127 VGVDLNRNFDYHWGGGGASSDPCSETYAGPSAFSEPETRAVRDFLLSLRGRIKAYLSLHSYGQLILYPWG 196 (294)
T ss_pred eeeccCCCCCCCCccCCCCCCCCCCCccCCCCCchHHHHHHHHHHHhccccEEEEEEeccCCceEEcCCC
Confidence 9999999999999742 234468999999999999999999998 79999999988877777774
No 49
>smart00631 Zn_pept Zn_pept.
Probab=99.93 E-value=3.8e-26 Score=234.95 Aligned_cols=177 Identities=29% Similarity=0.408 Sum_probs=137.5
Q ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC---Ccceeeeec--cceEEEecCCCCcccccccccc
Q psy7679 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT---NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNK 110 (608)
Q Consensus 36 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~---~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~ 110 (608)
||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++. .|+.+++.+ |+|||+++.....
T Consensus 1 y~ty~e~~~~l~~l~~~~~~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~k~~v~i~a~~Hg~E~~g~~~~~~--------- 71 (277)
T smart00631 1 YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISDGGSHNKPAIFIDAGIHAREWIGPATALY--------- 71 (277)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEeceecCCCCceEEEEEeCCCCCCCcEEEEECCccccccccHHHHHH---------
Confidence 89999999999999999999999999999999999999999976 378899988 9999997654443
Q ss_pred ccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce-----eEEeCCC---CCcc
Q psy7679 111 YGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL-----ARFVGRN---NANG 182 (608)
Q Consensus 111 ~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~-----~~~~g~~---ha~e 182 (608)
+++.|+..+..-. .+...+++..++ ++|+.||||++.. .|...+. +++|
T Consensus 72 -------------------~i~~L~~~~~~~~---~~~~ll~~~~i~-ivP~~NPDG~~~~~~~~~~wr~~r~~~~~~~G 128 (277)
T smart00631 72 -------------------LINQLLENYGRDP---RITKLLDKTDIY-IVPVLNPDGYEYTHTGDRLWRKNRSPNSNCRG 128 (277)
T ss_pred -------------------HHHHHHHhcccCH---HHHHHHHcCcEE-EEEeecCchhhheecccccccCCCCCCCCCcC
Confidence 3444443321100 001112444566 5599999998854 3333343 7999
Q ss_pred cccCCCCCCCcCCCCc--ccccCCCCCCchHHHHHHHHHHhcC-CceeeceeeeeeeeeecCCCC
Q psy7679 183 VDLNRNFPDQFDSSSE--RREQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 183 vdLNRNf~~~w~~~~~--~~~~~G~~p~sePEt~al~~~l~~~-~~l~~~~~h~g~ivp~~NpDG 244 (608)
+|||||||..|+...+ ...++|+.|+||||++++++++.+. ++...+++|++..+..++++.
T Consensus 129 vDLNRnf~~~w~~~~~p~~~~y~G~~~~sepEt~ai~~~~~~~~~~~~~id~Hs~~~~i~~p~~~ 193 (277)
T smart00631 129 VDLNRNFPFHWGKTGNPCSETYAGPSPFSEPETKAVRDFIRSNRRFVLYIDLHSYSQLILYPYGY 193 (277)
T ss_pred cccCCCCCCCCCCCCCCCCCCcCCCCCCCcHHHHHHHHHHHhcCCeeEEEEeccCCcEEEecCcC
Confidence 9999999999986433 3467999999999999999999999 899999999877666777655
No 50
>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=99.93 E-value=9e-26 Score=229.02 Aligned_cols=180 Identities=13% Similarity=0.062 Sum_probs=131.1
Q ss_pred ccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC------CceeeceeeeeeeeeecC
Q psy7679 168 CNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN------PFVLSGNLHGGAIVASYP 241 (608)
Q Consensus 168 ~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~------~~l~~~~~h~g~ivp~~N 241 (608)
.++.+|+.+++||+|+. |.+. ++.++..|... .+++++.++ |+|++|
T Consensus 47 ~~~~v~i~~~iH~~E~~--------------g~~~----------~l~l~~~L~~~~~~~~~~ll~~~~i~---i~P~~N 99 (271)
T cd06238 47 QPVVVWLGYSVHGNEIS--------------GTEA----------ALLTAYHLAAAQGDEIEALLDNAVVL---IDPMQN 99 (271)
T ss_pred CCcEEEEECCcCCCChH--------------HHHH----------HHHHHHHHHHcCCHHHHHHHhcCEEE---EEeccC
Confidence 35669999999999999 7654 55566665443 589999999 999999
Q ss_pred CCCCcc-------------CCCCC-------CCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEE
Q psy7679 242 FDDSKC-------------LGDRS-------SMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDIPFVLS 301 (608)
Q Consensus 242 pDG~~~-------------~~~~~-------~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~~~~~~ 301 (608)
|||++. +.+++ |..+|.||+|+||||||. ++||||||++++++.+++++++
T Consensus 100 PDG~~r~~~w~~~~~~~~~~~d~~~r~~~~~wp~~R~n~~g~DLNRD~~---------~~s~pEtra~~~~~~~~~p~~~ 170 (271)
T cd06238 100 PDGRDRFVNWYNSNRGMVPSADPQDREHNEPWPGGRTNHYWFDLNRDWL---------PLTQPESRGRLAAYHEWRPNVV 170 (271)
T ss_pred CCHHHHHHHhhhhccCCccccchhhhhcccCCccccccccCcccccccc---------cccCHHHHHHHHHHHhcCCeEE
Confidence 999651 33444 445789999999999994 8999999999999999999999
Q ss_pred EEEcccc---eeeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccC
Q psy7679 302 ANLHGGS---LVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSG 378 (608)
Q Consensus 302 ~~~Hs~~---~~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G 378 (608)
+|+|+++ ..+++|..... ..+..++...++...+++..+++.... | . .|..|... ..||+..|
T Consensus 171 ~D~H~~g~~~~~~~~P~~~~~---~np~~~p~~~~~~~~~g~~~~~al~~~--G-------~-~Y~t~~~~-d~~ypg~g 236 (271)
T cd06238 171 VDFHEMGTNSTYFFAPGAPPR---TNPLTPDQNRDLTATIGRNHAKAFDEI--G-------W-LYFTREVF-DDFYPGYG 236 (271)
T ss_pred EEeccCCCccceEEeCCCCcc---CCCCCCHHHHHHHHHHHHHHHHHHHhc--C-------C-cEEecccc-cccccCcC
Confidence 9999987 55666732210 012234555667777887777665443 1 1 12222222 35899999
Q ss_pred cccchhhhccCeEEEEEeecCC
Q psy7679 379 GMQDYNYIHANTLEITLELGCY 400 (608)
Q Consensus 379 ~~~Dw~y~~~~~~~~t~El~~~ 400 (608)
++..|. .|..++++|.+..
T Consensus 237 ~s~~~~---~g~ig~l~E~~~~ 255 (271)
T cd06238 237 STYPDL---NGAIGMLYEQASS 255 (271)
T ss_pred cchhhh---cCceeEEEEecCC
Confidence 877774 6788899999853
No 51
>PRK10602 murein peptide amidase A; Provisional
Probab=99.92 E-value=4.7e-25 Score=218.88 Aligned_cols=195 Identities=19% Similarity=0.156 Sum_probs=138.5
Q ss_pred eeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhc
Q psy7679 143 RLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKN 222 (608)
Q Consensus 143 ~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~ 222 (608)
....+|+|++||+|+.+.++.++ +..+++.+++||+|+. |.+ ++..++.+
T Consensus 16 ~~~~iG~S~egrpi~~l~~~~~~---~~~vli~agiHG~E~~--------------g~~-------------~~~~l~~~ 65 (237)
T PRK10602 16 GTEHYGRSLLGAPLLWFPAPAAS---RESGLILAGTHGDETA--------------SVV-------------TLSCALRT 65 (237)
T ss_pred cccccccccCCCceEEEEcCCCC---CceEEEEecCCCCcHH--------------HHH-------------HHHHHHHh
Confidence 45689999999999988765432 4568899999999999 643 33333333
Q ss_pred CCceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCC-CCCC------------C-------CCCCCC
Q psy7679 223 NPFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPG-QFGP------------S-------KYNSVP 282 (608)
Q Consensus 223 ~~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~-~w~~------------~-------~~~~~s 282 (608)
. .......+ +||++||||+.. ..|.||+|||||||||. .|.. | ++.|+|
T Consensus 66 l-~~~~~~~~---iipvvNPDG~~~-------~~R~n~~GvDLNRnFp~~~w~~~~~~~~w~~~~~~~~~~~y~G~~p~S 134 (237)
T PRK10602 66 L-TPSLRRHH---VVLAVNPDGCQL-------GLRANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGS 134 (237)
T ss_pred h-hhhccceE---EEEEECcccccc-------ccccCCCCCchhhcCCCcccccccccccccCCCCccchhhccCCCCCC
Confidence 2 12344566 999999999864 25889999999999996 6642 1 247999
Q ss_pred cHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCC
Q psy7679 283 EPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEEN 362 (608)
Q Consensus 283 epEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~ 362 (608)
||||+|+++|+.++++.+++++|+ ||.... . + ....+++.++++.+.-
T Consensus 135 epEt~al~~~i~~~~~~~~~s~Hs-------P~~~~~--------~-~---~~~~~~~~la~af~~~------------- 182 (237)
T PRK10602 135 EPETQALCQLIHRLQPAWVVSFHD-------PLACIE--------D-P---RHSELGEWLAQAFELP------------- 182 (237)
T ss_pred CHHHHHHHHHHHHcCCCEEEEeec-------cccccC--------C-c---cchHHHHHHHHHhCCC-------------
Confidence 999999999999999999999999 565421 1 1 1344555555543221
Q ss_pred CCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCCCCCCCcchHHHhhhhh
Q psy7679 363 FPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPAKDLPSYWEDNLPA 418 (608)
Q Consensus 363 f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~P~~~~l~~~w~~N~~a 418 (608)
... ...|+++|++.||++. .++..+|+|+++ .+..+++..+|.+-+..
T Consensus 183 ----~~~-~~~y~~~Gs~~~~a~~-~giP~it~El~~--~~~~~~v~~~~~~~~~~ 230 (237)
T PRK10602 183 ----LVT-SVGYETPGSFGSWCAD-LNLHCITAELPP--ISADEASEKYLFAMANL 230 (237)
T ss_pred ----eEe-ecCCCCCCcHHHHHHH-cCCcEEEEecCC--cCcHHHHHHHHHHHHHH
Confidence 010 2358888999999995 566669999997 56666666666554443
No 52
>KOG2649|consensus
Probab=99.92 E-value=5.7e-25 Score=229.89 Aligned_cols=187 Identities=32% Similarity=0.484 Sum_probs=145.5
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCCCcceeeeeccceEEEecCCCCcccccccccccccc
Q psy7679 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGTNKNKVSIISLYRLVTVSTTPAPIEEDIKKNKYGFI 114 (608)
Q Consensus 35 ~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~~~~~v~~~~hare~~~~~~~~~~~~~l~~~~~~~~ 114 (608)
+||+|++|+++|++++++||.+++++|||||+|||+||++.||+.++.....++|.+....++..+.+.++|+.
T Consensus 68 ~hh~y~~m~~~l~~~~~~~p~itrlYSiGkSv~Gr~L~Vle~sd~PgeH~~gePEfKyv~nmHGnE~vGRElll------ 141 (500)
T KOG2649|consen 68 GHHNYDDLEKALKDFTKRCPNITRLYSIGKSVEGRELWVIEISDRPGEHEPGEPEFKYIGNMHGNEVVGRELLL------ 141 (500)
T ss_pred CCCCHHHHHHHHHHHHhhCCcceeeeeccccccCceEEEEEcCCCCCcccCCCCcceeeeeccccccccHHHHH------
Confidence 79999999999999999999999999999999999999999998776666666677777777776666665543
Q ss_pred ccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce-----eEEeCCCCCcccccCCCC
Q psy7679 115 IPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL-----ARFVGRNNANGVDLNRNF 189 (608)
Q Consensus 115 ~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~-----~~~~g~~ha~evdLNRNf 189 (608)
.+.+-|+..|-. -..|++.+++..|.+ +|+.||||++.+ .|..|+.|++++||||||
T Consensus 142 --------------~L~e~Lc~~y~~---n~~i~~Lv~~trIHl-mPSmNPDGyE~a~~~~~~~~~GR~Nang~DLNrnF 203 (500)
T KOG2649|consen 142 --------------RLAEYLCDNYGK---DPRITQLVNNTRIHI-MPSMNPDGYEIAKRGDRGWATGRNNANGVDLNRNF 203 (500)
T ss_pred --------------HHHHHHHHhcCC---ChHHHHHHhhceEEE-ecccCcchhhhhhcccccceecccCccccchhccC
Confidence 333334443311 111233346667875 599999999876 789999999999999999
Q ss_pred CCCcCCCCccccc----------CCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCC
Q psy7679 190 PDQFDSSSERREQ----------PLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDS 245 (608)
Q Consensus 190 ~~~w~~~~~~~~~----------~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~ 245 (608)
|+++.......+. .-...-.+||+.|++.|+++.+|+++.++|||++|..|++|.-
T Consensus 204 Pd~~~~~~~~~~~~~~n~~l~~~~~~~~~~~pEt~Avm~W~~~~pFvLSAnLHGG~lvanYPfD~~ 269 (500)
T KOG2649|consen 204 PDQFRLVYFIVTFDLLNSHLIMFNDDLNLRQPETIAVMKWLRDIPFVLSANLHGGALVANYPFDDT 269 (500)
T ss_pred cccccceeeeeeecccccccccccccccccCccHHHHHHHHhhcceeeeccccCCceEEEccccCC
Confidence 9997643221111 0113356899999999999999999999999999999999994
No 53
>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.
Probab=99.91 E-value=1.8e-24 Score=222.10 Aligned_cols=160 Identities=20% Similarity=0.168 Sum_probs=122.3
Q ss_pred CCCceEEEEccccc------CCceeEEEecCCC-------Ccceeeeec--cceEEEecCCCCccccccccccccccccc
Q psy7679 53 NPSKVKLHSIGKSV------QNRDLWALQGGGT-------NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPV 117 (608)
Q Consensus 53 ~p~~~~~~~iG~S~------eGR~i~~l~Is~~-------~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~ 117 (608)
||+++++.+||+|+ |||+|++|+||+. .|+.+++.+ |+|||+++..+.+++..|+.
T Consensus 1 ~p~~~~~~~iG~S~~~~~~~eGR~I~~l~ig~~~~~~~~~~kp~v~i~~~iHarE~ig~~~~l~~i~~L~~--------- 71 (293)
T cd06226 1 YPNLAQWVDIGDSWDKPGGPAGYDIRALKLTNKATNSPTGPKPVFFIMGAIHAREYTTAELVLRFAEDLLE--------- 71 (293)
T ss_pred CCcceEEEEeeEecccCcccCCceEEEEEEecCCCCcCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHHHH---------
Confidence 79999999999999 9999999999863 367788888 99999987776666666554
Q ss_pred cccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce----eEEeC---------CCCCcccc
Q psy7679 118 QFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL----ARFVG---------RNNANGVD 184 (608)
Q Consensus 118 ~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~----~~~~g---------~~ha~evd 184 (608)
.|.+..++..+|+ +..++ ++|+.||||++.. .|... +.+++|||
T Consensus 72 --~~~~d~~v~~lL~--------------------~~~i~-ivP~~NPDG~~~~~~~~~wRkNr~~~~~~~~~~n~~GVD 128 (293)
T cd06226 72 --GYGTDADATWLLD--------------------YHEIH-VVPIVNPDGRKIAEQGLSQRKNANTSGGSNCSGSSYGVD 128 (293)
T ss_pred --hcccCHHHHHHHh--------------------cCeEE-EEecccCCcceeeccCcceeccCCCCCCCCccccccccc
Confidence 2333344444443 34466 5699999999864 33321 23458999
Q ss_pred cCCCCCCCcCCC------CcccccCCCCCCchHHHHHHHHHHhcCC----------------ceeeceeeeeeeeeecCC
Q psy7679 185 LNRNFPDQFDSS------SERREQPLNVKKLEPETLAMISFIKNNP----------------FVLSGNLHGGAIVASYPF 242 (608)
Q Consensus 185 LNRNf~~~w~~~------~~~~~~~G~~p~sePEt~al~~~l~~~~----------------~l~~~~~h~g~ivp~~Np 242 (608)
||||||+.|+.. ++...|+|++|||||||+|+++|+.+.. +...+++|++..+.++++
T Consensus 129 LNRNf~~~w~~~~~~~~~p~~~~y~G~~p~SEpEt~Av~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~HS~g~~i~~P~ 208 (293)
T cd06226 129 LNRNYSFGWGGAGASSGDPCSETYRGPAPGSEPETAALEDYIRGLFPDQRGPGDTDPAPDDTTGVYLDIHSYSNLVLYPW 208 (293)
T ss_pred cccCCCCcCCcCCCCCCCCCCCCcCCCCCCCcHHHHHHHHHHHhccccccccccccccccccceEEEEeccCCCeEeecC
Confidence 999999999742 2334689999999999999999999874 677899998887777776
Q ss_pred CC
Q psy7679 243 DD 244 (608)
Q Consensus 243 DG 244 (608)
+-
T Consensus 209 g~ 210 (293)
T cd06226 209 GW 210 (293)
T ss_pred cC
Confidence 53
No 54
>cd06242 Peptidase_M14-like_1_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.90 E-value=1.4e-23 Score=213.60 Aligned_cols=147 Identities=16% Similarity=0.189 Sum_probs=128.8
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCC----CCccceeEEeCCCCCcccccCCCCCCCcCCC
Q psy7679 121 HHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEE----GSCNSLARFVGRNNANGVDLNRNFPDQFDSS 196 (608)
Q Consensus 121 y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~np----dg~~~~~~~~g~~ha~evdLNRNf~~~w~~~ 196 (608)
+.+|+++.++|+.|++.+|.+.++.+||+|++||+|+++.++..+ +..++.+|+.+++||+|++
T Consensus 2 ~t~y~e~~~~l~~La~~~~~i~~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~V~i~~giHg~E~~------------ 69 (268)
T cd06242 2 PTSHEEMESFMKSLASKNDWMSYHSDIGKSEEGRSIPYVYLSTSKSSSSSSKKLRVWLQGGVHGNEPA------------ 69 (268)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEECccccCCceeEEEEEecCCccccCCCCCEEEEECCcCCCCHH------------
Confidence 458999999999999999999989999999999999999888644 3456779999999999999
Q ss_pred CcccccCCCCCCchHHHHHHHHHHhcC----CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCC
Q psy7679 197 SERREQPLNVKKLEPETLAMISFIKNN----PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQ 272 (608)
Q Consensus 197 ~~~~~~~G~~p~sePEt~al~~~l~~~----~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~ 272 (608)
|.+. ++.+++.|... ++++++.++ |+|++||||+.. ..|.||.|+||||||
T Consensus 70 --g~~a----------~l~ll~~L~~~~~~~~lL~~~~i~---ivP~~NPDG~~~-------~~R~na~g~DlNRD~--- 124 (268)
T cd06242 70 --GDEA----------ALALLGKLDNNPKWASVLEKIDII---VLPRYNPDGSAY-------FQRTLATGYDPNRDH--- 124 (268)
T ss_pred --HHHH----------HHHHHHHHHhCchHHHHHhcCeEE---EEeccCcchhhh-------ccccCCcCcccCCCC---
Confidence 8665 66666666544 478899999 999999999764 358999999999999
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEccccee
Q psy7679 273 FGPSKYNSVPEPETLAVEKWLQDIPFVLSANLHGGSLV 310 (608)
Q Consensus 273 w~~~~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~ 310 (608)
.++++||||++++++.++.+++++|+|+++..
T Consensus 125 ------~~~~~pEtra~~~~~~~~~P~v~iD~He~~~~ 156 (268)
T cd06242 125 ------TKLARQQTRDIKEAFSKFNPHIAIDAHEYGAF 156 (268)
T ss_pred ------CcccCHHHHHHHHHHHHhCCcEEEEeccCCcc
Confidence 47899999999999999999999999999886
No 55
>cd06235 M14_Nna1_like_2 Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induc
Probab=99.88 E-value=3.4e-22 Score=202.53 Aligned_cols=205 Identities=14% Similarity=0.128 Sum_probs=150.5
Q ss_pred CCCceeeeeccccccCeEEEEEEeeCC-----CCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHH
Q psy7679 138 YPNLTRLYSVGQSVEKRELWVLVYNDE-----EGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPE 212 (608)
Q Consensus 138 ~p~~~~l~~ig~s~~gr~i~~l~~~~n-----pdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePE 212 (608)
.+...++..||+|++||+|+++.++.. ++..++.+++.+++|++|+. |...
T Consensus 9 ~~~~~~~~~iG~S~eGr~i~~l~i~~~~~~~~~~~~k~~V~i~a~iH~~E~~--------------~s~~---------- 64 (258)
T cd06235 9 NNQYLKRKILCTTLGGLPVPLLTITSPSSKSIPIKKKKVIVITARQHPGETN--------------SSFV---------- 64 (258)
T ss_pred CCCceEEEEeEEcCCCCeeeEEEEeCCcccccccCCCcEEEEECCcCCCChH--------------HHHH----------
Confidence 456788999999999999999999863 34567789999999999999 7665
Q ss_pred HHHHHHHHhcC-----CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHH
Q psy7679 213 TLAMISFIKNN-----PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETL 287 (608)
Q Consensus 213 t~al~~~l~~~-----~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ 287 (608)
++.+++++.+. .++..+.++ |||++||||+... ..|.|+.||||||||.. + .++++||++
T Consensus 65 ~~~ll~~Ll~~~~~~~~Ll~~~~~~---iiPm~NPDG~~~g------~~R~n~~GvDLNR~w~~---p---~~~~~PE~~ 129 (258)
T cd06235 65 MQGFIDFLLSDSPEAQYLRENFIFK---IIPMLNPDGVIHG------NYRCSLSGIDLNRQWKN---P---DKKLHPEIY 129 (258)
T ss_pred HHHHHHHHhcCCHHHHHHHhccEEE---EEccccccceeec------CCcCCCCCCCcCCCCCC---C---CcccCcHHH
Confidence 67777877654 477889999 9999999997642 35999999999999973 2 369999999
Q ss_pred HHHHHHHhC----CcEEEEEEccccee-eeecCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHhhccccCCCCCCCCCCC
Q psy7679 288 AVEKWLQDI----PFVLSANLHGGSLV-ANYPYDDNQAMKPQVDSPTPD-DSIFKLLASSYANAHKKMYKDPGCPEYPEE 361 (608)
Q Consensus 288 ai~~~~~~~----~~~~~~~~Hs~~~~-i~yP~~~~~~~~~~~~~~~~d-~~~~~~la~~~a~~~~~~~~~~~~~~~~~~ 361 (608)
+++++++++ ++++++|+|+++.. -.|+|+.... +.+. ....+.+.+.++...+. ..-..|.
T Consensus 130 ~~~~~i~~~~~~~~~~~~iDlH~~s~~~~~F~yg~~~~-------~~~~~~~~~~~~p~~~~~~~~~-f~~~~c~----- 196 (258)
T cd06235 130 HVKQLIKKLSQERNIALFIDLHGHSRKKNSFMYGCSNS-------DDPLNYYKERLFPKLLSKLCPY-FSFSSCS----- 196 (258)
T ss_pred HHHHHHHHHhccCCceEEEecccccccCCeeeecCCCC-------CcHHHHHHHHHHHHHHHhhCcc-cCccccc-----
Confidence 999999998 79999999999875 3467876532 1111 23334444444433222 1212342
Q ss_pred CCCCcccccceeeeccCcccchhhhccCe-EEEEEeecCCCC
Q psy7679 362 NFPGGIVNGAQWYVVSGGMQDYNYIHANT-LEITLELGCYKF 402 (608)
Q Consensus 362 ~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~-~~~t~El~~~~~ 402 (608)
|..+ ....|++..++|...++ .+||+|++-+++
T Consensus 197 -f~~~-------~~k~~tar~~~~~~~~~~~syTlE~sf~g~ 230 (258)
T cd06235 197 -FKVQ-------KDKEGTARVALWRELGIPNSYTLETSFGGY 230 (258)
T ss_pred -cCCC-------CCCCCcHHHHHHHHcCCceEEEEeeecccc
Confidence 2111 12347888888865555 999999997765
No 56
>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.88 E-value=4.6e-22 Score=197.23 Aligned_cols=202 Identities=18% Similarity=0.256 Sum_probs=144.8
Q ss_pred HHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHH
Q psy7679 134 ITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPET 213 (608)
Q Consensus 134 l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt 213 (608)
+.+++|+.+++..||+|++||+|+++.++. .++.+++.+++||+|+. |... +
T Consensus 2 ~~~~~p~~v~~~~iG~S~eGrpI~~l~ig~----g~~~vli~agiHG~E~~--------------g~~a----------l 53 (231)
T cd06239 2 LLEKLPAKFKVEVIGKSVEGRPIYSVKFGS----GKIKILLWSQMHGNEST--------------TTKA----------L 53 (231)
T ss_pred hHHHCCCeeEEEEeeECCCCCeEEEEEEcC----CCcEEEEEeccCCCCHH--------------HHHH----------H
Confidence 456789999999999999999999998875 25679999999999999 7655 6
Q ss_pred HHHHHHHhcC------CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHH
Q psy7679 214 LAMISFIKNN------PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETL 287 (608)
Q Consensus 214 ~al~~~l~~~------~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ 287 (608)
+.+++++.+. .++....++ +||++||||+.. ..|.|++||||||||+ +++|||+|
T Consensus 54 l~ll~~L~~~~~~~~~~ll~~~~v~---iiP~lNPDG~~~-------~~R~N~~GvDLNRdf~---------~~s~PEtr 114 (231)
T cd06239 54 LDLLNFLGTSKDQEAKKILDEVTLV---IIPMLNPDGAEA-------YTRVNANGVDLNRDAQ---------DLSQPESR 114 (231)
T ss_pred HHHHHHHHHCCCHHHHHHHhCCEEE---EEeccCccHHHH-------cccCCCcCCcCCCCCC---------CCChHHHH
Confidence 6677777654 367889999 999999999764 3588999999999996 67999999
Q ss_pred HHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCC-CCCCCCCCCHH----HHHHHHHHHHHhh----ccccCCCCCCCC
Q psy7679 288 AVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMK-PQVDSPTPDDS----IFKLLASSYANAH----KKMYKDPGCPEY 358 (608)
Q Consensus 288 ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~-~~~~~~~~d~~----~~~~la~~~a~~~----~~~~~~~~~~~~ 358 (608)
+++++++++.+.+++|+|+++.+ |+++.+.... -.-..|..|.+ ..+..|...+... ..+-. .+...
T Consensus 115 ~l~~~~~~~~pd~~iDlH~~~~~--y~~~~~~~~~~~sfl~p~~d~~~~~~~~r~~a~~~i~~~~~~l~~~~~--~~i~~ 190 (231)
T cd06239 115 LLRDVYDGFQPDFCFNLHDQRTI--YGVENTGKPATISFLAPAADEERSINVNRKSAMLLIAAMNAMLQSYIP--GQIGR 190 (231)
T ss_pred HHHHHHHhcCCEEEEEECCCCCc--cCCCCCCCcceecccCcccchhcCCCHHHHHHHHHHHHHHHHHHHhcC--Cceee
Confidence 99999999999999999999987 6665443211 11234455544 4555555443332 22211 12221
Q ss_pred CCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecC
Q psy7679 359 PEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGC 399 (608)
Q Consensus 359 ~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~ 399 (608)
..+.|... +.|+ .+...|...+.+|.|.
T Consensus 191 y~d~~~~~---------~~gd----~~~~~g~~til~e~g~ 218 (231)
T cd06239 191 YDDGFNPN---------CVGD----TFQYLGTPTVLFEAGG 218 (231)
T ss_pred ecCCCCCC---------cchh----hHhhcCCceEEEECCC
Confidence 12222111 1133 4555678889999986
No 57
>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification. ; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....
Probab=99.88 E-value=2.4e-23 Score=214.75 Aligned_cols=170 Identities=27% Similarity=0.316 Sum_probs=124.1
Q ss_pred HHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC------Ccceeeeec--cceEEEecCCCCccccccccccccc
Q psy7679 42 LTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT------NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGF 113 (608)
Q Consensus 42 i~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~------~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~ 113 (608)
|.+||++|+++||+++++.+||+|+|||+|++++|++. .++.|++.+ |++||+++..+..+++.|+.
T Consensus 1 i~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~k~~v~i~~~~Hg~E~~g~~~~l~~~~~L~~----- 75 (279)
T PF00246_consen 1 INAYLDALAARYPDIVRLESIGKSYEGRPIYALTIGSNSNGSDPGKPTVLIIAGIHGNEWIGSEALLYLIEELLS----- 75 (279)
T ss_dssp HHHHHHHHHHHSTTTEEEEEEEE-TTS-EEEEEEESSSTTTTSTTSEEEEEEE-SSTT-THHHHHHHHHHHHHHH-----
T ss_pred CHHHHHHHHHHCCCcEEEEEeeECCCCCeEEEEEeecccccccccccceEEEecccccccCchHHHHHHHHHhhc-----
Confidence 78999999999999999999999999999999999964 577888888 99999965544444333332
Q ss_pred cccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce-----eEEeCCCCCcccccCCC
Q psy7679 114 IIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL-----ARFVGRNNANGVDLNRN 188 (608)
Q Consensus 114 ~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~-----~~~~g~~ha~evdLNRN 188 (608)
.| ....+..+| ++..++ ++|+.||||++.. .|..++.+++|+|||||
T Consensus 76 ------~~-~~~~~~~ll--------------------~~~~i~-iiP~~NPDG~~~~~~~~~~w~~~R~n~~GvDlNRn 127 (279)
T PF00246_consen 76 ------GY-DDPEVKELL--------------------DNVVIY-IIPMVNPDGYEYGTSGDRGWRKNRSNANGVDLNRN 127 (279)
T ss_dssp ------HT-TSHHHHHHH--------------------HHEEEE-EES-SSHHHHHHHHHT-TTCCSTSSBTTS--GGGS
T ss_pred ------cc-cchhhhhhc--------------------ccceEE-EEeeecccceeeeeecccccccccccccccccccc
Confidence 01 122223333 233344 6799999998765 46777999999999999
Q ss_pred CCCCcCCC-----CcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCC
Q psy7679 189 FPDQFDSS-----SERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 189 f~~~w~~~-----~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG 244 (608)
|+..|+.. +....++|+.|+||||++++++++.+.++...+++|++.-..+++++.
T Consensus 128 f~~~w~~~~~~~~~~~~~y~g~~~~sepEt~al~~~~~~~~~~~~id~H~~~~~~~~p~~~ 188 (279)
T PF00246_consen 128 FPYQWNEEGSSSNPCSETYRGPAPFSEPETRALRNLIQDWNPDFFIDFHSGGNAILYPYGY 188 (279)
T ss_dssp SSSSTTSSSSBSSTTSTTB--SSTTTSHHHHHHHHHHHHTTEEEEEEEEESSSEEEESESS
T ss_pred cCcccccccccCCCCCcccCCCcchhhhHHHHHHHHHhhcceeEEEeccccccceeeeccc
Confidence 99999543 223457899999999999999999999999999999877666566553
No 58
>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.87 E-value=1.3e-22 Score=209.84 Aligned_cols=160 Identities=16% Similarity=0.092 Sum_probs=118.6
Q ss_pred cccccCCceeEEEecCCC---Ccceeeeec--cceEEEecCCCCccccccccccccccccccc--cCCCHHHHHHHHHHH
Q psy7679 62 IGKSVQNRDLWALQGGGT---NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPVQF--SHHNYTQMQAELEHI 134 (608)
Q Consensus 62 iG~S~eGR~i~~l~Is~~---~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~~~--~y~~~~~i~~~L~~l 134 (608)
-++|+|||+|++|+||+. .|+.|++++ |||||+++..+.+++++|+.... --..+.+ .+.+.+++.++|+ +
T Consensus 6 ~~~S~EgR~I~~l~I~~~~~~~kp~V~i~ggiHAREwis~~~~l~~i~~Ll~~y~-~~~~~~yg~~~~~d~~v~~lL~-~ 83 (332)
T cd06228 6 PHKTYEGRTPHGAKIGAGTLTSRYGALFIGGVHARERGSPDNLIYFVSDLLNARK-AGRGIKYGGRTYTAADVKAILD-A 83 (332)
T ss_pred CCCCCCCCeeEEEEEeCCCCCCCCEEEEEccccccchhhHHHHHHHHHHHHHhhh-ccccccccccccccHHHHHHHh-C
Confidence 489999999999999863 467899988 99999999888888888765100 0000000 0113445555554 3
Q ss_pred HHhCCCceeeeeccccccCeEEEEEEeeCCCCCccce-----eEEeCC--------CCCcccccCCCCCCCcCC------
Q psy7679 135 TKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL-----ARFVGR--------NNANGVDLNRNFPDQFDS------ 195 (608)
Q Consensus 135 ~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~-----~~~~g~--------~ha~evdLNRNf~~~w~~------ 195 (608)
+++ ++|++||||++.. +|...+ ..|+||||||||+++|+.
T Consensus 84 --------------------~i~-IvP~vNPDGy~~s~~~~r~WRKNr~~~~~~~~~~c~GVDLNRNf~~~W~~~~~~~~ 142 (332)
T cd06228 84 --------------------GIV-VFPLVNPDGRAHDQTANSCWRKNRNPASAGPNPSSVGVDINRNFDFLWDFQKYFDP 142 (332)
T ss_pred --------------------eEE-EEEeecCcchhheeccchhhhccCCCCcccccCcccccccCCCCCCCcCccccccc
Confidence 344 5699999999875 343222 268999999999999972
Q ss_pred -------C--CcccccCCCCCCchHHHHHHHHHHhcCC-ceeeceeeeeeeeeecCCCC
Q psy7679 196 -------S--SERREQPLNVKKLEPETLAMISFIKNNP-FVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 196 -------~--~~~~~~~G~~p~sePEt~al~~~l~~~~-~l~~~~~h~g~ivp~~NpDG 244 (608)
+ +++..|+|+.||||||++++.+++.+.+ +...+++|++..+.++++.-
T Consensus 143 ~~~~~g~S~~Pcse~Y~G~~pfSEPET~av~~~~~~~~~~~~yls~HSygq~il~P~g~ 201 (332)
T cd06228 143 GASRSVASTDPASETFHGTAAFSEPETRNVVWVMDTFKNIRWFVDLHSYGGDVLYSWGD 201 (332)
T ss_pred ccccCCCCCCCCccccCCCCCCccHHHHHHHHHHhccCCeEEEEEeccCCceEEecccC
Confidence 1 2334689999999999999999998875 88999999999888998843
No 59
>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.86 E-value=3.6e-21 Score=195.63 Aligned_cols=151 Identities=23% Similarity=0.288 Sum_probs=121.9
Q ss_pred HHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCC--------CccceeEEeCCCCCcccccCCCCCCCcCCCCcccc
Q psy7679 130 ELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEG--------SCNSLARFVGRNNANGVDLNRNFPDQFDSSSERRE 201 (608)
Q Consensus 130 ~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npd--------g~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~ 201 (608)
|+++|++.+|. +++.+||+|.+||+|++++++.+.. ..++.+|+.+++||+|++ |.+
T Consensus 2 ~~~~La~~~~~-v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~~~~~kp~v~i~agiH~~E~~--------------G~~ 66 (266)
T cd06241 2 FLERLAAASPL-IRLESFGKTPEGRPLHLLVLSKDGAFTPEEAKRSGKPVVLVQAGIHAGEID--------------GKD 66 (266)
T ss_pred HHHHHHHhCCc-eEEEEeEeCCCCCeeEEEEEecCCccchhhhcccCCCEEEEeCCcCCCCch--------------HHH
Confidence 78889888864 7999999999999999998876431 346779999999999999 866
Q ss_pred cCCCCCCchHHHHHHHHHHhcC---CceeeceeeeeeeeeecCCCCCccC--CCCC------CCCCCCcccccCCCCCCC
Q psy7679 202 QPLNVKKLEPETLAMISFIKNN---PFVLSGNLHGGAIVASYPFDDSKCL--GDRS------SMIGRKNAHDVDLNRNFP 270 (608)
Q Consensus 202 ~~G~~p~sePEt~al~~~l~~~---~~l~~~~~h~g~ivp~~NpDG~~~~--~~~~------~~~~R~n~~GvDLNRnf~ 270 (608)
. ++.+++.+... .+++.+.++ +||++||||+... ..+. ....|.|++|+||||||+
T Consensus 67 a----------~~~ll~~L~~~~~~~ll~~~~i~---ivP~~NpDG~~~~~~~~r~~q~gp~~~~~R~na~g~DLNRdf~ 133 (266)
T cd06241 67 A----------GLMLLRDLADGKKDALLDKVVLV---FIPVFNVDGHERRSPYNRTNQNGPEEYGWRGNARNLNLNRDFI 133 (266)
T ss_pred H----------HHHHHHHHHhcchHHHHhCCEEE---EEeCCCccHHHhcccccccccCCCCccCceecccceecCCCCc
Confidence 5 56666555433 488999999 9999999996521 1111 123689999999999995
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCC
Q psy7679 271 GQFGPSKYNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDN 318 (608)
Q Consensus 271 ~~w~~~~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~ 318 (608)
..++|||||+++++.++++++++|+|+.++. .|+|+..
T Consensus 134 ---------~~~~pEtra~~~~~~~~~p~~~iD~H~~~g~-~~~yd~t 171 (266)
T cd06241 134 ---------KLDAPEMRAFAKLFNKWNPDLFIDNHVTDGA-DYQYDLT 171 (266)
T ss_pred ---------ccCCHHHHHHHHHHHHhCCCEEEEeccCCCc-Cceeeec
Confidence 5799999999999999999999999998774 6787654
No 60
>cd06904 M14_MpaA_like Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.
Probab=99.86 E-value=1.5e-21 Score=187.60 Aligned_cols=155 Identities=19% Similarity=0.162 Sum_probs=115.3
Q ss_pred eEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCCccCCCC
Q psy7679 172 ARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDSKCLGDR 251 (608)
Q Consensus 172 ~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~~~~~~~ 251 (608)
+++.+++||+|+. |... ++.+++.+... .+...+++ +||++||||+..
T Consensus 1 vli~agiHG~E~~--------------g~~~----------~~~l~~~l~~~-~l~~~~i~---ivP~~NPdG~~~---- 48 (178)
T cd06904 1 VLIIGGIHGDEPA--------------SVSD----------LEELLRILPGL-ILRGLSWY---VIPVLNPDGLLR---- 48 (178)
T ss_pred CEEEeccCCCCHH--------------HHHH----------HHHHHHHHHHH-hhcCCeEE---EEeCcCccHHhh----
Confidence 4678999999999 7544 45555555443 35578899 999999999764
Q ss_pred CCCCCCCcccccCCCCCCCCCCCCC---------CCCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCC
Q psy7679 252 SSMIGRKNAHDVDLNRNFPGQFGPS---------KYNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMK 322 (608)
Q Consensus 252 ~~~~~R~n~~GvDLNRnf~~~w~~~---------~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~ 322 (608)
+.|.|++|||||||||..|... +..++|||||+++++++.+.++++++|+|+++..+.++.
T Consensus 49 ---~~R~n~~gvDLNRnFp~~~~~~~~~~~~~~~G~~~~sepEt~al~~~~~~~~~~~~idlHs~~~~~~~~~------- 118 (178)
T cd06904 49 ---ATRCNANGVDLNRNFPTKDWPPGASRYRRYPGPKPGSEPESRALMDLIERFKPDVVVSFHAPLGVLDGDG------- 118 (178)
T ss_pred ---CcccCCCCcChhhcCCccccccCCCcccccCCCCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCeecCCC-------
Confidence 4688999999999999998542 236899999999999999999999999999876654321
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCC
Q psy7679 323 PQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYK 401 (608)
Q Consensus 323 ~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~ 401 (608)
+. ..||+. .+. +.. . ...|+..|++.||++...+++++|+|++...
T Consensus 119 -------~~----~~la~~----~g~-----~~~-----------~--~~~~~~~G~~~~~a~~~~gip~it~Elg~~~ 164 (178)
T cd06904 119 -------PN----EPLARK----FGY-----LGF-----------D--DLGYPTPGSLGSWAGVERNIPVITIELPYNL 164 (178)
T ss_pred -------ch----hHHHHH----hCC-----Ccc-----------c--cCCccCCCcHHHHHhhcCCCeEEEEEcCCcc
Confidence 11 344443 221 100 0 0114467999999999889999999999853
No 61
>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.85 E-value=8.3e-21 Score=190.24 Aligned_cols=150 Identities=19% Similarity=0.131 Sum_probs=115.0
Q ss_pred ccccccCeEEEEEEeeCCC----------------CC-------------ccceeEEeCCCCCcccccCCCCCCCcCCCC
Q psy7679 147 VGQSVEKRELWVLVYNDEE----------------GS-------------CNSLARFVGRNNANGVDLNRNFPDQFDSSS 197 (608)
Q Consensus 147 ig~s~~gr~i~~l~~~~np----------------dg-------------~~~~~~~~g~~ha~evdLNRNf~~~w~~~~ 197 (608)
||+|++||++|+++++..+ |. .++.+++.+++||+|+.
T Consensus 1 iGkS~eGR~l~~~~Is~~~a~ld~~~~~~~~l~l~dp~~~~~~~~~~~~~~~k~v~~~~~iHg~E~~------------- 67 (268)
T cd06244 1 AGKSAEGRDIPVVVVAKPEAAVDKYENETLPLMLENPPELADKIEDGTIEDYKPPIINNNIHPDETP------------- 67 (268)
T ss_pred CCcCCCCCeeEEEEEeCcHHHHHHHHHHhhhhhhcCcccchhhhccccccccCeEEEEeCcCCCCHH-------------
Confidence 6999999999999999875 21 11225667899999999
Q ss_pred cccccCCCCCCchHHHHHHHHHHhcC----------------------CceeeceeeeeeeeeecCCCCCccCCCCCCCC
Q psy7679 198 ERREQPLNVKKLEPETLAMISFIKNN----------------------PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMI 255 (608)
Q Consensus 198 ~~~~~~G~~p~sePEt~al~~~l~~~----------------------~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~ 255 (608)
|.+. ++.++++|+.. .++.++.++ |+|++||||+.. .
T Consensus 68 -g~~a----------~l~ll~~L~~~~~~~~~~~~~~~~~~~~~~~i~~lL~~~~i~---i~P~~NPDG~~~-------~ 126 (268)
T cd06244 68 -GIDA----------QTELIEELAQEDEIEFNTTDADGNEVTETLDVDDLLEKVIFL---FNVTENPDGRVA-------G 126 (268)
T ss_pred -HHHH----------HHHHHHHHHhcccccccccccccccccCCHHHHHHHhcCEEE---EEecccCCccee-------e
Confidence 8765 66666666532 368899999 999999999864 3
Q ss_pred CCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeee-cCCCCCCCCCCCCCCCCCHHH
Q psy7679 256 GRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANY-PYDDNQAMKPQVDSPTPDDSI 334 (608)
Q Consensus 256 ~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~y-P~~~~~~~~~~~~~~~~d~~~ 334 (608)
+|.|++|+||||||. ..++||||++++++.++++++++|+|++..-.++ | +..+ ..|.-+.++
T Consensus 127 ~R~Na~G~DLNRD~~---------~~sqpEt~av~~~~~~w~P~~~~dlHg~~~~~~~~P-~~~p------~np~~~~~l 190 (268)
T cd06244 127 TRENANGFDLNRDNS---------FQTQPETQAIVALIAEWNPASFLDLHGYVEGFLIEP-CTPP------HEPNFEYDL 190 (268)
T ss_pred eecCCCccccCCCCC---------cccCHHHHHHHHHHHHhCCeEEEEeCCCCCceEEcC-CCCC------CCCCcCHHH
Confidence 699999999999995 4699999999999999999999999998844444 7 3332 335555566
Q ss_pred HHHHHHHHHHhh
Q psy7679 335 FKLLASSYANAH 346 (608)
Q Consensus 335 ~~~la~~~a~~~ 346 (608)
+..++...+++.
T Consensus 191 ~~~~~~~~~~~~ 202 (268)
T cd06244 191 LADHALAQAHAM 202 (268)
T ss_pred HHHHHHHHHHHH
Confidence 666555555443
No 62
>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.85 E-value=1.5e-20 Score=187.27 Aligned_cols=118 Identities=21% Similarity=0.267 Sum_probs=101.1
Q ss_pred ccccccCeEEEEEEeeCCCC------CccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHH
Q psy7679 147 VGQSVEKRELWVLVYNDEEG------SCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFI 220 (608)
Q Consensus 147 ig~s~~gr~i~~l~~~~npd------g~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l 220 (608)
||+|++||+|++++++..+. ..++.+++.+++||+|+. |.+. ++.++..|
T Consensus 1 iG~S~eGRpi~~l~i~~~~~~~~~~~~~~p~v~i~~giHG~E~~--------------G~~a----------~l~ll~~L 56 (236)
T cd06243 1 IGTSQRGRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEPA--------------GREA----------LLIIARDL 56 (236)
T ss_pred CccCCCCCeeEEEEEecCCCccccccCCCCEEEEECCcCCCChH--------------HHHH----------HHHHHHHH
Confidence 69999999999999886542 245779999999999999 7655 56666665
Q ss_pred hcC------CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q psy7679 221 KNN------PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQ 294 (608)
Q Consensus 221 ~~~------~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~ 294 (608)
... +++.++.++ |+|++||||+.. .+|.|+.|+||||||+ ++++||||++++++.
T Consensus 57 ~~~~~~~~~~lL~~~~i~---ivP~~NPDG~~~-------~~R~n~~g~DlNRd~~---------~~~~pEt~al~~~~~ 117 (236)
T cd06243 57 AFGEDEELVPLLHQTTVL---FVPTANPDGREA-------DTRSNADGIDINRDHL---------LLNTPEAQALASVLR 117 (236)
T ss_pred HhcCCHHHHHHHhcceEE---EEeCcCccHhhc-------CCcCCCCCcccCCCCC---------CCCCHHHHHHHHHHH
Confidence 432 578899999 999999999864 4699999999999996 689999999999999
Q ss_pred hCCcEEEEEEccc
Q psy7679 295 DIPFVLSANLHGG 307 (608)
Q Consensus 295 ~~~~~~~~~~Hs~ 307 (608)
++.+.+++|+|++
T Consensus 118 ~~~p~~~iDlHe~ 130 (236)
T cd06243 118 DYRPDVVVDAHEY 130 (236)
T ss_pred hcCCEEEEEeCCC
Confidence 9999999999999
No 63
>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N
Probab=99.84 E-value=4.1e-20 Score=185.09 Aligned_cols=205 Identities=13% Similarity=0.121 Sum_probs=141.4
Q ss_pred CCceeeeeccccccCeEEEEEEeeCCC-----CCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHH
Q psy7679 139 PNLTRLYSVGQSVEKRELWVLVYNDEE-----GSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPET 213 (608)
Q Consensus 139 p~~~~l~~ig~s~~gr~i~~l~~~~np-----dg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt 213 (608)
...+++..+|+|++||+|++++++... +..++.+|+.+++|++|+. +... +
T Consensus 11 ~~~~~~~~lg~S~eGR~i~~LtIt~~~~~~~~~~~K~~I~I~ariHp~E~~--------------~s~~----------~ 66 (261)
T cd06907 11 SKFCKLRVLCRTLAGNTVYLLTITSPSSNPSLAAAKKAVVLTARVHPGETN--------------ASWM----------M 66 (261)
T ss_pred CCceEEEEEEECCCCCeeeEEEEcCCCccccccCCCCEEEEECCcCCChHH--------------HHHH----------H
Confidence 356788999999999999999997632 2457789999999999987 5544 5
Q ss_pred HHHHHHHhcC-----CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHH
Q psy7679 214 LAMISFIKNN-----PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLA 288 (608)
Q Consensus 214 ~al~~~l~~~-----~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~a 288 (608)
..+++++.+. .++..++++ ||||+||||+... ..|.++.|+||||||...| +.+.||+.+
T Consensus 67 ~gll~~L~~~~~~a~~Lr~~~~f~---IvPmlNPDGv~~G------~~R~~~~G~DLNR~w~~p~------~~~~P~i~~ 131 (261)
T cd06907 67 KGFLDFLTSNSPDAQLLRDTFIFK---IVPMLNPDGVIVG------NYRCSLAGRDLNRNYKTPL------KDSFPTIWY 131 (261)
T ss_pred HHHHHHHhcCCHHHHHHHhcCCEE---EEEeecCcccccc------CCcCCCcCCCCCcCCCCCC------cccCchHHH
Confidence 6677777553 467889999 9999999998742 3488999999999997543 568899777
Q ss_pred HHHHHHh----CCcEEEEEEcccceeee-ecCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHhhccccCCCCCCCCCCCC
Q psy7679 289 VEKWLQD----IPFVLSANLHGGSLVAN-YPYDDNQAMKPQVDSPTPD-DSIFKLLASSYANAHKKMYKDPGCPEYPEEN 362 (608)
Q Consensus 289 i~~~~~~----~~~~~~~~~Hs~~~~i~-yP~~~~~~~~~~~~~~~~d-~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~ 362 (608)
++++++. .++++++|+|+.++... |||++... +.+. ...-+.+.+.++...+.+..-..|... .+.
T Consensus 132 ~k~li~~l~~~~~i~~ylDlHghs~~~~~F~yG~~~~-------~~~~~~~~~~~fp~l~~~~~~~~F~~~~c~F~-~~~ 203 (261)
T cd06907 132 TKNMVKRLLEEREVILYCDLHGHSRKNNVFMYGCENK-------LNPEKWLHERVFPLMMSKNAPDKFSFRSCKFK-VQK 203 (261)
T ss_pred HHHHHHHHHhcCCeEEEEEeccchhccceEeecCCCC-------CCHHHHHHHHHHHHHHHhcCccceecccCCcc-CCC
Confidence 7776544 35889999999999854 89998532 1111 112233444444433323333456321 111
Q ss_pred CCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCC
Q psy7679 363 FPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKF 402 (608)
Q Consensus 363 f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~ 402 (608)
.+. |+..=.++...+..+||+|.+-+++
T Consensus 204 ~k~------------~t~Rv~~~~~~~~~syTlE~s~~G~ 231 (261)
T cd06907 204 SKE------------GTGRVVMWRLGILNSFTMEATFCGS 231 (261)
T ss_pred CCC------------CCceEEhhhhcCceEEEEeeEcccc
Confidence 122 3333334555566999999997765
No 64
>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.
Probab=99.82 E-value=7.8e-21 Score=193.00 Aligned_cols=149 Identities=23% Similarity=0.289 Sum_probs=106.8
Q ss_pred ccCCceeEEEecCCCCcceeeeec--cceEEEecCCCCccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCce
Q psy7679 65 SVQNRDLWALQGGGTNKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLT 142 (608)
Q Consensus 65 S~eGR~i~~l~Is~~~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~ 142 (608)
|+|||+|++++||+.. +.+++++ |||||+++..+.+++.+|+. .+..-.
T Consensus 1 S~eGR~I~~~~ig~~~-~~v~i~agiHarE~~~~~~~l~~i~~L~~----------------------------~~~~~~ 51 (255)
T cd06229 1 SVLGRDIYEVKLGNGP-KTVFYNASFHAREWITTLLLMKFIEEYAR----------------------------AYENNE 51 (255)
T ss_pred CCCCceeeEEEEcCCC-ceEEEECCccccchhhHHHHHHHHHHHHH----------------------------HhccCc
Confidence 7999999999999754 7888888 99999976655555444443 221100
Q ss_pred ee--eeccccccCeEEEEEEeeCCCCCccceeE----------------------EeCCCCCcccccCCCCCCCcCCC--
Q psy7679 143 RL--YSVGQSVEKRELWVLVYNDEEGSCNSLAR----------------------FVGRNNANGVDLNRNFPDQFDSS-- 196 (608)
Q Consensus 143 ~l--~~ig~s~~gr~i~~l~~~~npdg~~~~~~----------------------~~g~~ha~evdLNRNf~~~w~~~-- 196 (608)
.+ ..+...+++.+++ ++|+.||||++.... -..+.+|+|||||||||+.|+..
T Consensus 52 ~~~~~~~~~lL~~~~i~-ivP~~NPDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~ 130 (255)
T cd06229 52 KLGGYDLRELLENVTIC-FVPMVNPDGVEIVQNGPYAIRNYYLELLVINAGSINFKEWKANARGVDLNRNFPAGWEKEKA 130 (255)
T ss_pred cccchhHHHHHhcCeEE-EEeCccCCchheeeecccccccchhhhHHhhcCCCcccccccCCcccccCCCCCCCCCcCCC
Confidence 00 0011112445566 559999999986521 01146799999999999999742
Q ss_pred ----CcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCC
Q psy7679 197 ----SERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFD 243 (608)
Q Consensus 197 ----~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpD 243 (608)
+++..|+|+.|+||||++++++++.+.++...+++|++.-+.++++.
T Consensus 131 ~s~~p~~~~y~G~~p~SEpEtral~~~~~~~~~~~~i~~Hs~g~~i~~~~~ 181 (255)
T cd06229 131 GPKAPAPRNYKGEQPLSEPETIALAELTRENRFRAVLAYHSQGEEIYWGYG 181 (255)
T ss_pred CCCCCCccCcCCCCCCCchhHHHHHHHHHhCCCeEEEEecCCCCeEEecCC
Confidence 23456899999999999999999999999999999977666666653
No 65
>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=99.81 E-value=2.7e-20 Score=187.72 Aligned_cols=149 Identities=18% Similarity=0.096 Sum_probs=116.8
Q ss_pred HHHHHHhCCCceEEEEcccccCCceeEEEecCCC-------Ccceeeeec--cceEEEecCCCCcccccccccccccccc
Q psy7679 46 LVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT-------NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIP 116 (608)
Q Consensus 46 l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~-------~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~ 116 (608)
|++|+++||+++++.+||+|+|||+|++|+||++ +|+.|++.+ |+|||+++..+..++..|+.
T Consensus 1 l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~It~~~~~~~~~~k~~I~i~ariHp~E~~~s~~~~~li~~L~~-------- 72 (261)
T cd06908 1 LDALEKRSLDYFRREQLGQSVQKRRLDLLTIDSPDNLREDSEKKVIFITARVHPGESPSSYVCQGLIDFLVS-------- 72 (261)
T ss_pred ChHHHhhCCCcEEEEEeEEcCCCCeeEEEEEcCCCccccCCCCcEEEEECCcCCCChHHHHHHHHHHHHHhh--------
Confidence 5789999999999999999999999999999874 467788888 99999987776666555544
Q ss_pred ccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCC
Q psy7679 117 VQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSS 196 (608)
Q Consensus 117 ~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~ 196 (608)
+.+....+++++ +|.++|+.||||+..+ ..+.+|.|+||||||+
T Consensus 73 ------~~~~~~~L~~~~---------------------~~~IvP~~NPDGv~~g---n~R~~~~G~DLNR~w~------ 116 (261)
T cd06908 73 ------NHPIAKVLREHL---------------------VFKIVPMLNPDGVFLG---NYRCSLMGHDLNRHWH------ 116 (261)
T ss_pred ------CCHHHHHHHHhC---------------------cEEEEeeecCcceeec---CCcCcCcCcCCCCCCC------
Confidence 223344444333 4567799999998765 4578899999999997
Q ss_pred CcccccCCCCCCchHHHHHHHHHHhcC------CceeeceeeeeeeeeecCCCCC
Q psy7679 197 SERREQPLNVKKLEPETLAMISFIKNN------PFVLSGNLHGGAIVASYPFDDS 245 (608)
Q Consensus 197 ~~~~~~~G~~p~sePEt~al~~~l~~~------~~l~~~~~h~g~ivp~~NpDG~ 245 (608)
++.|+++||++++.+++.+. ++...+++||.+..+.+=|-|+
T Consensus 117 -------~p~~~~~PEv~av~~~i~~~~~~~~~~i~~~lD~H~hs~~~~~F~yG~ 164 (261)
T cd06908 117 -------DPSPWAHPTLHAVKNLLKELDNDSTTQLDFYIDLHAHSSLMNCFIYGN 164 (261)
T ss_pred -------CCCcccChHHHHHHHHHHHhhhccccCeeEEEEeeccccccceeeccc
Confidence 35678999999999999863 6888999998887763333343
No 66
>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=99.81 E-value=3.6e-19 Score=182.04 Aligned_cols=138 Identities=14% Similarity=0.138 Sum_probs=112.4
Q ss_pred eeeeeccccccCeEEEEEEeeCCCC------------------------CccceeEEeCCCCCcccccCCCCCCCcCCCC
Q psy7679 142 TRLYSVGQSVEKRELWVLVYNDEEG------------------------SCNSLARFVGRNNANGVDLNRNFPDQFDSSS 197 (608)
Q Consensus 142 ~~l~~ig~s~~gr~i~~l~~~~npd------------------------g~~~~~~~~g~~ha~evdLNRNf~~~w~~~~ 197 (608)
.+...+|+|.+||++++++++...+ ..++.+|+.+++|++||.
T Consensus 16 ~~~~~Lg~S~eGR~i~lLtITs~~~~~~~~~~~~~~l~~~~~~~~~~~~~~K~~V~I~ariHp~E~~------------- 82 (304)
T cd06236 16 YHREVLCYSLEGRRIDLLTITSCHGKLEQREPRLEGLFPDRKTPRPHFFFGKPVVFISSRVHPGETP------------- 82 (304)
T ss_pred EEEEEeEECCCCCceEEEEEecCcccccccccccccccccccccccccccCCcEEEEECCcCCCCch-------------
Confidence 4677899999999999999986421 235669999999999999
Q ss_pred cccccCCCCCCchHHHHHHHHHHhcC------CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCC
Q psy7679 198 ERREQPLNVKKLEPETLAMISFIKNN------PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPG 271 (608)
Q Consensus 198 ~~~~~~G~~p~sePEt~al~~~l~~~------~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~ 271 (608)
+... ++.++++|.+. .+++.+.|+ ||||+||||+... ..|.|+.|+||||+|-.
T Consensus 83 -~s~~----------~~~ll~~Ll~~~d~~a~~L~~~~~~~---IvPmlNPDGv~~g------~~R~~~~G~DLNR~y~~ 142 (304)
T cd06236 83 -SSFV----------FNGFLKFLLNKDDPRAALLRRRFVFK---LIPMLNPDGVYRG------HYRTDTRGVNLNRVYLN 142 (304)
T ss_pred -HHHH----------HHHHHHHHHhCCCHHHHHHHhCCeEE---EEEeEcccccccC------ccccCCcCCCcCcCCCC
Confidence 7655 66778888653 356779999 9999999998752 24889999999999842
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHhC----CcEEEEEEcccceeee-ecCCCC
Q psy7679 272 QFGPSKYNSVPEPETLAVEKWLQDI----PFVLSANLHGGSLVAN-YPYDDN 318 (608)
Q Consensus 272 ~w~~~~~~~~sepEt~ai~~~~~~~----~~~~~~~~Hs~~~~i~-yP~~~~ 318 (608)
..++++||++|+++++..+ ++++++|+|+.+.... |+|++.
T Consensus 143 ------p~~~~~Pei~aik~~i~~~~~~~~i~~yiDlH~hs~~~~~F~Yg~~ 188 (304)
T cd06236 143 ------PDPELHPSIYAIKKLILYLHEESRLAFYIDLHAHASKRGCFIYGNA 188 (304)
T ss_pred ------CCcccCHHHHHHHHHHHHhhccCCceEEEEecccccccceEeeecC
Confidence 2589999999999999874 4899999999999876 888875
No 67
>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=99.80 E-value=6.9e-20 Score=183.82 Aligned_cols=152 Identities=24% Similarity=0.268 Sum_probs=112.8
Q ss_pred CCCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC-Ccceeeeec--cceEEEecCCCCccccccccccc
Q psy7679 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT-NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKY 111 (608)
Q Consensus 35 ~y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~-~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~ 111 (608)
.-.+++||.+||++|++. +++++.+||+|+|||+|++|+||++ .++.+++.+ |+|||+++.....++..|+.
T Consensus 6 ~~~~~~~i~~~l~~L~~~--~~v~~~~iG~S~eGR~i~~l~ig~~~~k~~v~i~~~iH~~E~~g~~~~~~~~~~l~~--- 80 (244)
T cd06237 6 ELIDNQDVKDWVDSLIKQ--PFVELELLGLSTQGRPLKALERGNPDSKEWIVVISRQHPPEVTGALAMKAFIETLLS--- 80 (244)
T ss_pred eeCCHHHHHHHHHHHhcC--CCeEEEEeeEcCCCCEEEEEEecCCCCCceEEEEcCcCCCcHHHHHHHHHHHHHHHh---
Confidence 356889999999999865 7889999999999999999999875 456788887 99999965544433333322
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCC
Q psy7679 112 GFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPD 191 (608)
Q Consensus 112 ~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~ 191 (608)
+.+.+..+| ++..++ ++|+.||||.+.+. .+.+++|+||||||+
T Consensus 81 -----------~~~~~~~ll--------------------~~~~i~-ivP~~NPDG~~~~~---wR~N~~GvDLNRnw~- 124 (244)
T cd06237 81 -----------DSELAKKFR--------------------AKYNVL-LVPNMNPDGVDLGH---WRHNANGIDLNRDWS- 124 (244)
T ss_pred -----------CCHHHHHHH--------------------HhCEEE-EEEeeCcchhhcCC---ccCCCCCcCCCCCCC-
Confidence 111122222 344455 56999999998753 478889999999985
Q ss_pred CcCCCCcccccCCCCCCchHHHHHHHHHHhcC-----CceeeceeeeeeeeeecCC
Q psy7679 192 QFDSSSERREQPLNVKKLEPETLAMISFIKNN-----PFVLSGNLHGGAIVASYPF 242 (608)
Q Consensus 192 ~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~-----~~l~~~~~h~g~ivp~~Np 242 (608)
++||||++++.+++.+. ++...+++|+..-...|++
T Consensus 125 ---------------~~sepEt~a~~~~~~~~~~~~~~~~~~id~Hs~~~~i~~~~ 165 (244)
T cd06237 125 ---------------NFNQPETRAIRDYLVRLVKEGGKIVFALDFHSTWHDVFYTM 165 (244)
T ss_pred ---------------CCCCHHHHHHHHHHHHHhccCCCEEEEEEeccCCcceEecC
Confidence 46899999999998853 6888899996554444443
No 68
>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.80 E-value=6.3e-19 Score=175.78 Aligned_cols=127 Identities=24% Similarity=0.333 Sum_probs=102.9
Q ss_pred ccccccCeEEEEEEeeCCCC--------CccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHH
Q psy7679 147 VGQSVEKRELWVLVYNDEEG--------SCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMIS 218 (608)
Q Consensus 147 ig~s~~gr~i~~l~~~~npd--------g~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~ 218 (608)
||+|++||+|++++++.... ..++.+++.+++||+|+. |.+. ++.+++
T Consensus 1 iG~S~eGRpi~~~~i~~~~~~~~~~~~~~~k~~v~i~~giHg~E~~--------------g~~a----------~~~l~~ 56 (226)
T cd03857 1 IGKSVEGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNESA--------------GSDA----------LLELLR 56 (226)
T ss_pred CccCCCCCeEEEEEEeCCccccccccccCCCcEEEEECCcCCCCch--------------HHHH----------HHHHHH
Confidence 68999999999998886321 135669999999999999 7655 566666
Q ss_pred HHhcC-----CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHH
Q psy7679 219 FIKNN-----PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWL 293 (608)
Q Consensus 219 ~l~~~-----~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~ 293 (608)
.+... .++....++ ++|++||||+.. ..|.|++|+||||||+ .+++||||++++++
T Consensus 57 ~l~~~~~~~~~ll~~~~i~---ivP~~NPDG~~~-------~~R~n~~g~DLNRd~~---------~~~~pEt~~~~~~~ 117 (226)
T cd03857 57 QLASASDEEAKMLENIVIV---LIPRANPDGAAL-------FTRENANGLDLNRDFL---------KLTQPETRAVREVF 117 (226)
T ss_pred HHHhCCHHHHHHHhCCEEE---EEeccCCChHHh-------ccccCCCcccCCCCCC---------CcCCHHHHHHHHHH
Confidence 66543 367889999 999999999764 2599999999999996 46999999999999
Q ss_pred HhCCcEEEEEEcccceeeeecCC
Q psy7679 294 QDIPFVLSANLHGGSLVANYPYD 316 (608)
Q Consensus 294 ~~~~~~~~~~~Hs~~~~i~yP~~ 316 (608)
.++++.+++|+|+++.-..++|.
T Consensus 118 ~~~~p~~~iDlH~~~~g~~~~~~ 140 (226)
T cd03857 118 IEWKPQFFIDLHEYGFGAVSFYD 140 (226)
T ss_pred HHcCCeEEEEcCCCCCcceecCC
Confidence 99999999999999322334444
No 69
>cd06240 Peptidase_M14-like_1_3 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=99.80 E-value=4.7e-19 Score=179.44 Aligned_cols=178 Identities=12% Similarity=0.028 Sum_probs=113.9
Q ss_pred ccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC------CceeeceeeeeeeeeecC
Q psy7679 168 CNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN------PFVLSGNLHGGAIVASYP 241 (608)
Q Consensus 168 ~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~------~~l~~~~~h~g~ivp~~N 241 (608)
.++.+|+.+++||+|+. |.+. ++.++..|... .+++++.++ |+|++|
T Consensus 56 ~kp~v~i~~~iHg~E~~--------------g~ea----------~l~l~~~L~~~~d~~~~~lLd~~~i~---i~P~~N 108 (273)
T cd06240 56 GKPIVWIDGGLHSTETG--------------GPQM----------LMELAYRLATEEDPEIKRILDNVIVL---IVPVAN 108 (273)
T ss_pred CCCEEEEECCcCCCchH--------------HHHH----------HHHHHHHHHhcCCHHHHHHHhcCEEE---EEeCcC
Confidence 35679999999999999 8765 66677666542 599999999 999999
Q ss_pred CCCCccCCC----C---------CCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEcccc
Q psy7679 242 FDDSKCLGD----R---------SSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDIPFVLSANLHGGS 308 (608)
Q Consensus 242 pDG~~~~~~----~---------~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~ 308 (608)
|||+..-.+ . ..+.-|.+..|+|||||| ...+.||+|++.+++.++.+.+++|+|..|
T Consensus 109 PDG~er~~~w~~~~~~~~~~~~~~~~~~~~~y~g~DlNRD~---------~~~~~~et~~~~~~~~~w~P~v~~D~He~g 179 (273)
T cd06240 109 PDGRDRVVDWYMRTLGPPKRDRSPLPPLYGKYVGHDNNRDG---------YMNQQETTNNSRKLFLEWHPQIMYDLHQSG 179 (273)
T ss_pred CCHHHHhhhhhhhccCCcccCCCCcccccCccCCcCCCccc---------chhcCHHHHHHHHHHHhcCCcEEEEcccCC
Confidence 999652111 0 111225678899999999 568999999999999999999999999875
Q ss_pred ee--eee-cCCCCCCCCCCCCCCCCCHH---HHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccc
Q psy7679 309 LV--ANY-PYDDNQAMKPQVDSPTPDDS---IFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQD 382 (608)
Q Consensus 309 ~~--i~y-P~~~~~~~~~~~~~~~~d~~---~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~D 382 (608)
.. .+| |-...+ ..|--|.. .+..+|..++++.-+.-. + +. |..+.- ..||+--|+.
T Consensus 180 ~~~~~~f~p~~~~p------~np~~~~~~~~~~~~~g~~~~~~~~~~g~--~-----G~-~t~~~f--D~~ypgyg~t-- 241 (273)
T cd06240 180 PAGPRLFVPPGTDP------FNPNIDPILITELQMVGAAMAARLTAEGK--P-----GV-FTHGFY--DTWWPGYLRW-- 241 (273)
T ss_pred CCCCeEeCCCCCCC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCC--C-----ce-eecCcc--CCccCCccch--
Confidence 33 233 421222 22323333 445556665554422100 0 00 212111 1356544441
Q ss_pred hhhhccCeEEEEEeecCC
Q psy7679 383 YNYIHANTLEITLELGCY 400 (608)
Q Consensus 383 w~y~~~~~~~~t~El~~~ 400 (608)
|. ...|..++..|....
T Consensus 242 ~p-~~~g~ig~l~E~~~~ 258 (273)
T cd06240 242 VA-YFHNSIGRLTETFGN 258 (273)
T ss_pred hh-hhcCceeeeeEeccC
Confidence 11 246777899998765
No 70
>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=99.79 E-value=1.3e-19 Score=183.25 Aligned_cols=149 Identities=23% Similarity=0.266 Sum_probs=112.0
Q ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC--Ccceeeeec--cceEEEecCCCCccccccccccc
Q psy7679 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT--NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKY 111 (608)
Q Consensus 36 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~--~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~ 111 (608)
=++|+++.+||+.+++. ..+++.+||+|+|||+|++|+||++ +|++|++.+ |+||+++...
T Consensus 10 Pys~~~~~~~l~~~~~~--~~v~~~~iG~S~eGR~i~~l~I~~~~~~k~~V~i~a~iH~~E~~g~~~------------- 74 (263)
T cd06234 10 PYSYERHLALIARAQGA--PDVRLEVLGQTVQGRDIDLLTFGEPGPGKKKLWIIARQHPGETMAEWF------------- 74 (263)
T ss_pred CCCHHHHHHHHHHHhcC--CCeEEEEEEEcCCCCeEEEEEEccCCCCCCEEEEECCCCCCcHHHHHH-------------
Confidence 36899999999999873 4789999999999999999999864 577899988 9999663311
Q ss_pred cccccccccCCCHHHHHHHHHHHHHh-CCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCC
Q psy7679 112 GFIIPVQFSHHNYTQMQAELEHITKN-YPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFP 190 (608)
Q Consensus 112 ~~~~~~~~~y~~~~~i~~~L~~l~~~-~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~ 190 (608)
+..+++.|... .|...++ .++.+ |.++|+.||||+..+. .+.+|+|+||||||+
T Consensus 75 ---------------~~~ll~~L~~~~d~~~~~l------l~~~~-~~IvP~~NPDG~~~g~---~R~n~~GvDLNRnw~ 129 (263)
T cd06234 75 ---------------MEGLLERLLDPDDAVARAL------LEKAV-FYVVPNMNPDGSARGH---LRTNAAGANLNREWA 129 (263)
T ss_pred ---------------HHHHHHHHhhcCCHHHHHH------HhcCE-EEEEeeecchhhhhcC---CccCCCCCCCCCCCC
Confidence 23333444332 1111111 13333 4467999999988752 367999999999997
Q ss_pred CCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeee
Q psy7679 191 DQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIV 237 (608)
Q Consensus 191 ~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~iv 237 (608)
++.+++|||++++.+++.+..+...+++|+...+
T Consensus 130 -------------~p~~~s~PEt~av~~~~~~~~~~~~ld~Hs~~~~ 163 (263)
T cd06234 130 -------------EPSAERSPEVFAVRQRMEETGVDFFLDVHGDEAL 163 (263)
T ss_pred -------------CCCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCC
Confidence 3458899999999999998888899999965544
No 71
>cd06242 Peptidase_M14-like_1_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.75 E-value=2.1e-18 Score=175.65 Aligned_cols=141 Identities=17% Similarity=0.110 Sum_probs=109.4
Q ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC-------Ccceeeeec--cceEEEecCCCCcccccc
Q psy7679 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT-------NKNKVSIIS--LYRLVTVSTTPAPIEEDI 106 (608)
Q Consensus 36 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~-------~~~~v~~~~--hare~~~~~~~~~~~~~l 106 (608)
+.+|+||.+||++|++++|.++++.+||+|+|||+|++++||++ .|+.|++.+ |++||++......+++.|
T Consensus 2 ~t~y~e~~~~l~~La~~~~~i~~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~V~i~~giHg~E~~g~~a~l~ll~~L 81 (268)
T cd06242 2 PTSHEEMESFMKSLASKNDWMSYHSDIGKSEEGRSIPYVYLSTSKSSSSSSKKLRVWLQGGVHGNEPAGDEAALALLGKL 81 (268)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEECccccCCceeEEEEEecCCccccCCCCCEEEEECCcCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999988999999999999999999864 356788887 999999765554444443
Q ss_pred ccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccC
Q psy7679 107 KKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLN 186 (608)
Q Consensus 107 ~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLN 186 (608)
+. +. ...++| ++. .+++.|+.||||.+.. .+.+|+++|||
T Consensus 82 ~~--------------~~-~~~~lL--------------------~~~-~i~ivP~~NPDG~~~~----~R~na~g~DlN 121 (268)
T cd06242 82 DN--------------NP-KWASVL--------------------EKI-DIIVLPRYNPDGSAYF----QRTLATGYDPN 121 (268)
T ss_pred Hh--------------Cc-hHHHHH--------------------hcC-eEEEEeccCcchhhhc----cccCCcCcccC
Confidence 32 00 011222 333 3446699999998763 57799999999
Q ss_pred CCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceee
Q psy7679 187 RNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLH 232 (608)
Q Consensus 187 RNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h 232 (608)
|||.. +++||++++.+++.+......+++|
T Consensus 122 RD~~~----------------~~~pEtra~~~~~~~~~P~v~iD~H 151 (268)
T cd06242 122 RDHTK----------------LARQQTRDIKEAFSKFNPHIAIDAH 151 (268)
T ss_pred CCCCc----------------ccCHHHHHHHHHHHHhCCcEEEEec
Confidence 99943 3579999999999987667788888
No 72
>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p
Probab=99.73 E-value=2.6e-18 Score=177.66 Aligned_cols=88 Identities=18% Similarity=0.201 Sum_probs=72.5
Q ss_pred EEEEEeeCCCCCccce-----eEEe-----CCCCCcccccCCCCCCCcCCC-----CcccccCCCCCCchHHHHHHHHHH
Q psy7679 156 LWVLVYNDEEGSCNSL-----ARFV-----GRNNANGVDLNRNFPDQFDSS-----SERREQPLNVKKLEPETLAMISFI 220 (608)
Q Consensus 156 i~~l~~~~npdg~~~~-----~~~~-----g~~ha~evdLNRNf~~~w~~~-----~~~~~~~G~~p~sePEt~al~~~l 220 (608)
++ ++|+.||||++.. +|.. ++..|+||||||||++.|+.. +++..|+|+.|||||||+++++|+
T Consensus 99 i~-ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~~~Y~G~~pfSEpEt~av~~~~ 177 (301)
T cd03870 99 IF-LEIVTNPDGYVFTHSQNRLWRKTRSVTSGSLCVGVDPNRNWDAGFGGAGASSNPCSETYHGPYANSEVEVKSIVDFV 177 (301)
T ss_pred EE-EEeeecCchhhheecccceeecCCCCCCCCCccccccccCCCcccCcCCCCCCCCccccCCCCCCccHHHHHHHHHH
Confidence 55 5699999999765 4543 334799999999999999732 234468999999999999999999
Q ss_pred hcC-CceeeceeeeeeeeeecCCCC
Q psy7679 221 KNN-PFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 221 ~~~-~~l~~~~~h~g~ivp~~NpDG 244 (608)
.+. ++...+++|++..+.+++++-
T Consensus 178 ~~~~~~~~~l~lHS~g~~i~yP~~~ 202 (301)
T cd03870 178 KSHGNFKAFISIHSYSQLLLYPYGY 202 (301)
T ss_pred hhCCCeEEEEEeccCCceEEecCcC
Confidence 876 588899999999999999875
No 73
>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M
Probab=99.73 E-value=6.7e-18 Score=172.01 Aligned_cols=146 Identities=16% Similarity=0.109 Sum_probs=114.5
Q ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC-Ccceeeeec--cceEEEecCCCCcccccccccccc
Q psy7679 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT-NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYG 112 (608)
Q Consensus 36 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~-~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~ 112 (608)
-.+|.+...+++.++ |+.+++.+||+|+|||+|++++++.. +|+.|++.+ |+|||+++.....++..|+.
T Consensus 10 ~~~y~~~~~l~~sl~---~~~v~l~~IG~s~egr~i~~~~~~~~~~k~~i~i~a~iH~~E~~~~~~~~~li~~Ll~---- 82 (269)
T cd03856 10 NQIYDRRLALCESLQ---GNSCDLLTITSPPEGNDIKYEHLCSFANKKYIFLIARVHPGETNASWVMKGFLEFLLS---- 82 (269)
T ss_pred CcCHHHHHHHHHHhc---CCceeEEEeccCCCCccccceeccCCCCCcEEEEEcCcCCCchHHHHHHHHHHHHHHh----
Confidence 457788888888886 78899999999999999999999754 577888888 99999987766655555543
Q ss_pred ccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCC
Q psy7679 113 FIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQ 192 (608)
Q Consensus 113 ~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~ 192 (608)
..+.+..+++++ .+.++|+.||||.+.+. .+.+|+|+||||||+
T Consensus 83 ----------~~~~~~~ll~~~---------------------~~~ivP~~NPDG~~~g~---~R~n~~G~DLNR~~~-- 126 (269)
T cd03856 83 ----------DNPTAQSLRESF---------------------VFKIVPMLNPDGVIRGN---YRCSLSGVDLNRQWQ-- 126 (269)
T ss_pred ----------CCHHHHHHHhcC---------------------eEEEEeeeCCccccccC---CcCCCCCCCcCCCCC--
Confidence 112233333332 45577999999988653 477999999999997
Q ss_pred cCCCCcccccCCCCCCchHHHHHHHHHHhcC-----Cceeeceeeeee
Q psy7679 193 FDSSSERREQPLNVKKLEPETLAMISFIKNN-----PFVLSGNLHGGA 235 (608)
Q Consensus 193 w~~~~~~~~~~G~~p~sePEt~al~~~l~~~-----~~l~~~~~h~g~ 235 (608)
++.++++||++++.+++.+. ++...+++||+.
T Consensus 127 -----------~p~~~~~pE~~~~~~~~~~~~~~~~~~~~~idlH~~~ 163 (269)
T cd03856 127 -----------NPSPDLHPEIYLVKGLMLYLAAGKRGVLFYCDFHGHS 163 (269)
T ss_pred -----------CCCCCCCCCHHHHHHHHHHHHhccCCceEEEEecCCC
Confidence 35689999999999999876 788899999776
No 74
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=99.72 E-value=5.6e-18 Score=174.95 Aligned_cols=89 Identities=19% Similarity=0.182 Sum_probs=71.1
Q ss_pred EEEEEEeeCCCCCccce-----eEE-----eCCCCCcccccCCCCCCCcCCC-----CcccccCCCCCCchHHHHHHHHH
Q psy7679 155 ELWVLVYNDEEGSCNSL-----ARF-----VGRNNANGVDLNRNFPDQFDSS-----SERREQPLNVKKLEPETLAMISF 219 (608)
Q Consensus 155 ~i~~l~~~~npdg~~~~-----~~~-----~g~~ha~evdLNRNf~~~w~~~-----~~~~~~~G~~p~sePEt~al~~~ 219 (608)
++| ++|..||||++.. +|. ..+..|+|||||||||+.|+.. +++..|+|+.|||||||+|+++|
T Consensus 98 ~~~-ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~pc~~~Y~G~~p~SEpEt~Al~~~ 176 (300)
T cd03871 98 DFY-VLPVLNIDGYIYTWTKNRMWRKTRSTNAGSSCIGTDPNRNFNAGWCTVGASRNPCDETYCGSAPESEKETKALADF 176 (300)
T ss_pred eEE-EEEeecCCcCeeeeccCHHHHHhcCCCCCCCccccccCcCCCCccCCCCCCCCCCCCCcCCCCCCCCHHHHHHHHH
Confidence 355 5699999999865 222 2344589999999999999742 23345899999999999999999
Q ss_pred HhcC--CceeeceeeeeeeeeecCCCC
Q psy7679 220 IKNN--PFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 220 l~~~--~~l~~~~~h~g~ivp~~NpDG 244 (608)
+.+. .+...+++|++..+.++|++-
T Consensus 177 ~~~~~~~~~~~l~~HSyg~~i~~Py~~ 203 (300)
T cd03871 177 IRNNLSSIKAYLTIHSYSQMLLYPYSY 203 (300)
T ss_pred HHhcCcceeEEEEeccCccEEEecCcC
Confidence 9886 467788999999999999853
No 75
>PRK10602 murein peptide amidase A; Provisional
Probab=99.66 E-value=2e-16 Score=157.28 Aligned_cols=128 Identities=24% Similarity=0.276 Sum_probs=96.2
Q ss_pred eEEEEcccccCCceeEEEecCCCCcceeeeec--cceEEEecCCCCccccccccccccccccccccCCCHHHHHHHHHHH
Q psy7679 57 VKLHSIGKSVQNRDLWALQGGGTNKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHI 134 (608)
Q Consensus 57 ~~~~~iG~S~eGR~i~~l~Is~~~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~~~~y~~~~~i~~~L~~l 134 (608)
....+||+|+|||+|++++++..+++++++.+ |++||++... +..+++++
T Consensus 15 ~~~~~iG~S~egrpi~~l~~~~~~~~~vli~agiHG~E~~g~~~----------------------------~~~l~~~l 66 (237)
T PRK10602 15 PGTEHYGRSLLGAPLLWFPAPAASRESGLILAGTHGDETASVVT----------------------------LSCALRTL 66 (237)
T ss_pred ccccccccccCCCceEEEEcCCCCCceEEEEecCCCCcHHHHHH----------------------------HHHHHHhh
Confidence 47789999999999999999877788888888 9999995432 33444444
Q ss_pred HHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCC-CcCCC---------Ccc---cc
Q psy7679 135 TKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPD-QFDSS---------SER---RE 201 (608)
Q Consensus 135 ~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~-~w~~~---------~~~---~~ 201 (608)
.... ... .++|..||||++.. .+.+|+++|||||||. .|... ... ..
T Consensus 67 ~~~~---------------~~~-~iipvvNPDG~~~~----~R~n~~GvDLNRnFp~~~w~~~~~~~~w~~~~~~~~~~~ 126 (237)
T PRK10602 67 TPSL---------------RRH-HVVLAVNPDGCQLG----LRANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVL 126 (237)
T ss_pred hhhc---------------cce-EEEEEECccccccc----cccCCCCCchhhcCCCcccccccccccccCCCCccchhh
Confidence 3211 112 24578999998764 5679999999999997 66432 111 23
Q ss_pred cCCCCCCchHHHHHHHHHHhcCCceeeceee
Q psy7679 202 QPLNVKKLEPETLAMISFIKNNPFVLSGNLH 232 (608)
Q Consensus 202 ~~G~~p~sePEt~al~~~l~~~~~l~~~~~h 232 (608)
++|+.|+||||++++++++.+......+++|
T Consensus 127 y~G~~p~SepEt~al~~~i~~~~~~~~~s~H 157 (237)
T PRK10602 127 LTGDKPGSEPETQALCQLIHRLQPAWVVSFH 157 (237)
T ss_pred ccCCCCCCCHHHHHHHHHHHHcCCCEEEEee
Confidence 6899999999999999999987656667777
No 76
>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna
Probab=99.66 E-value=2.5e-15 Score=151.22 Aligned_cols=212 Identities=15% Similarity=0.087 Sum_probs=136.7
Q ss_pred CCCceeeeeccccccCeEEEEEEeeCCCCC----------ccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCC
Q psy7679 138 YPNLTRLYSVGQSVEKRELWVLVYNDEEGS----------CNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVK 207 (608)
Q Consensus 138 ~p~~~~l~~ig~s~~gr~i~~l~~~~npdg----------~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p 207 (608)
.+...+...+++|.+|+++.+++++..|+. .++.+|+.+++|++|.. +...
T Consensus 11 ~~~y~~~~~Lc~Tl~G~~v~lltIt~~~~~~~~~~~~~~~~kp~I~I~ARvHPgEt~--------------~Swi----- 71 (278)
T cd06906 11 QQIYFRQQVLCETLGGNSCPLLTITAMPESNYYEHICQFRNRPYIFLSARVHPGETN--------------ASWV----- 71 (278)
T ss_pred cccEEeeecceeccCCCceeEEEEeCCCccccccccccccCCcEEEEEcccCCCcch--------------HHHH-----
Confidence 344567788999999999999999986542 45679999999999955 4333
Q ss_pred CchHHHHHHHHHHhcC-----CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCC
Q psy7679 208 KLEPETLAMISFIKNN-----PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVP 282 (608)
Q Consensus 208 ~sePEt~al~~~l~~~-----~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~s 282 (608)
+..+++++.+. .+++.++|+ ||||+||||+... ..|-|..|+||||||.. + .|-.
T Consensus 72 -----~~g~l~~L~~~d~~a~~Lr~~~~f~---IvPmlNPDGvv~G------n~Rc~~~G~DLNR~w~~---p---~~~~ 131 (278)
T cd06906 72 -----MKGTLEFLMSSSPTAQSLRESYIFK---IVPMLNPDGVING------NHRCSLSGEDLNRQWQS---P---NPEL 131 (278)
T ss_pred -----HHHHHHHHhCCCHHHHHHHHhCcEE---EEeeecCccceec------ccccCCCCCCCCCCCCC---C---Cccc
Confidence 67777777664 477889999 9999999998743 25778899999999862 1 3456
Q ss_pred cHH---HHHHHHHHHhC--CcEEEEEEcccceee-eecCCCCCCCCCCC------CCCCCCHHHHHHHHHHHHHhhcccc
Q psy7679 283 EPE---TLAVEKWLQDI--PFVLSANLHGGSLVA-NYPYDDNQAMKPQV------DSPTPDDSIFKLLASSYANAHKKMY 350 (608)
Q Consensus 283 epE---t~ai~~~~~~~--~~~~~~~~Hs~~~~i-~yP~~~~~~~~~~~------~~~~~d~~~~~~la~~~a~~~~~~~ 350 (608)
.|| ++++++++.+. .+.+++|+|+++..- .|=|+......... .....+....+.+.+.++...+. .
T Consensus 132 ~P~i~~~k~l~~~l~~~~~~~~~yiDlHghs~~~~~F~yG~~~~~~~~~~~~~~~~~~~~~~~~~~~fP~ll~~~~~~-F 210 (278)
T cd06906 132 HPTIYHTKGLLQYLAAIKRSPLVYCDYHGHSRKKNVFMYGCSIKETVWHTNVNSASCDLVEDSGYRTLPKILSHIAPA-F 210 (278)
T ss_pred ChHHHHHHHHHHHHHHhCCCceEEEeecccccccceEEeccCCCcchhhhhccccccccchhhhHHHHHHHHHhcCCc-c
Confidence 676 66666777654 467999999988642 12233321100000 00112333445566666554332 2
Q ss_pred CCCCCCCCCCCCCCCcccccceeeeccCcccchhhh-ccCeEEEEEeecCCCC
Q psy7679 351 KDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYI-HANTLEITLELGCYKF 402 (608)
Q Consensus 351 ~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~-~~~~~~~t~El~~~~~ 402 (608)
.-..|... -+..+. |+..=.+|. .+...+||+|.+-+++
T Consensus 211 s~~~C~F~-~~k~K~------------gTaRv~~~~~~~i~~syTlE~Sf~G~ 250 (278)
T cd06906 211 SMSSCSFV-VEKSKE------------STARVVVWREIGVQRSYTMESTLCGC 250 (278)
T ss_pred chhhCCcc-CCCCCC------------CCeeEehhhhcCCceEEEEEEEeccc
Confidence 32345321 111122 344444553 4567899999997765
No 77
>cd06235 M14_Nna1_like_2 Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induc
Probab=99.64 E-value=1.5e-16 Score=161.43 Aligned_cols=133 Identities=19% Similarity=0.130 Sum_probs=100.5
Q ss_pred CCCceEEEEcccccCCceeEEEecCCC--------Ccceeeeec--cceEEEecCCCCccccccccccccccccccccCC
Q psy7679 53 NPSKVKLHSIGKSVQNRDLWALQGGGT--------NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPVQFSHH 122 (608)
Q Consensus 53 ~p~~~~~~~iG~S~eGR~i~~l~Is~~--------~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~~~~y~ 122 (608)
.++.+++.+||+|+|||+|++++||++ .++.|++.+ |++||+++..+..++..|+.
T Consensus 9 ~~~~~~~~~iG~S~eGr~i~~l~i~~~~~~~~~~~~k~~V~i~a~iH~~E~~~s~~~~~ll~~Ll~-------------- 74 (258)
T cd06235 9 NNQYLKRKILCTTLGGLPVPLLTITSPSSKSIPIKKKKVIVITARQHPGETNSSFVMQGFIDFLLS-------------- 74 (258)
T ss_pred CCCceEEEEeEEcCCCCeeeEEEEeCCcccccccCCCcEEEEECCcCCCChHHHHHHHHHHHHHhc--------------
Confidence 577899999999999999999999873 567888888 99999976555544443332
Q ss_pred CHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCccccc
Q psy7679 123 NYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQ 202 (608)
Q Consensus 123 ~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~ 202 (608)
.++++..+++. . ++.++|+.||||...+ ..+.+++|+||||||..
T Consensus 75 ~~~~~~~Ll~~--------------------~-~~~iiPm~NPDG~~~g---~~R~n~~GvDLNR~w~~----------- 119 (258)
T cd06235 75 DSPEAQYLREN--------------------F-IFKIIPMLNPDGVIHG---NYRCSLSGIDLNRQWKN----------- 119 (258)
T ss_pred CCHHHHHHHhc--------------------c-EEEEEccccccceeec---CCcCCCCCCCcCCCCCC-----------
Confidence 11223333322 2 4557799999997543 45789999999999984
Q ss_pred CCCCCCchHHHHHHHHHHhcC----Cceeeceeeeeee
Q psy7679 203 PLNVKKLEPETLAMISFIKNN----PFVLSGNLHGGAI 236 (608)
Q Consensus 203 ~G~~p~sePEt~al~~~l~~~----~~l~~~~~h~g~i 236 (608)
+.|+++||++++.+++.+. ++...+++||.+-
T Consensus 120 --p~~~~~PE~~~~~~~i~~~~~~~~~~~~iDlH~~s~ 155 (258)
T cd06235 120 --PDKKLHPEIYHVKQLIKKLSQERNIALFIDLHGHSR 155 (258)
T ss_pred --CCcccCcHHHHHHHHHHHHhccCCceEEEecccccc
Confidence 2368899999999998876 7889999997654
No 78
>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.63 E-value=4.2e-16 Score=154.78 Aligned_cols=139 Identities=24% Similarity=0.298 Sum_probs=103.0
Q ss_pred HHHhCCCceEEEEcccccCCceeEEEecCCCCcceeeeec--cceEEEecCCCCccccccccccccccccccccCCCHHH
Q psy7679 49 AAQQNPSKVKLHSIGKSVQNRDLWALQGGGTNKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQ 126 (608)
Q Consensus 49 la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~~~~y~~~~~ 126 (608)
+.+++|+++++..||+|+|||+|++++|++ +++++++.+ |++||.+...
T Consensus 2 ~~~~~p~~v~~~~iG~S~eGrpI~~l~ig~-g~~~vli~agiHG~E~~g~~a---------------------------- 52 (231)
T cd06239 2 LLEKLPAKFKVEVIGKSVEGRPIYSVKFGS-GKIKILLWSQMHGNESTTTKA---------------------------- 52 (231)
T ss_pred hHHHCCCeeEEEEeeECCCCCeEEEEEEcC-CCcEEEEEeccCCCCHHHHHH----------------------------
Confidence 456799999999999999999999999996 677888887 9999985543
Q ss_pred HHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCC
Q psy7679 127 MQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNV 206 (608)
Q Consensus 127 i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~ 206 (608)
+..+++.|....... +..-.++..++ ++|+.||||.+. ..+.+++++||||||+.
T Consensus 53 ll~ll~~L~~~~~~~-----~~~ll~~~~v~-iiP~lNPDG~~~----~~R~N~~GvDLNRdf~~--------------- 107 (231)
T cd06239 53 LLDLLNFLGTSKDQE-----AKKILDEVTLV-IIPMLNPDGAEA----YTRVNANGVDLNRDAQD--------------- 107 (231)
T ss_pred HHHHHHHHHHCCCHH-----HHHHHhCCEEE-EEeccCccHHHH----cccCCCcCCcCCCCCCC---------------
Confidence 344444444322110 00112334455 569999999876 36778999999999974
Q ss_pred CCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCC
Q psy7679 207 KKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 207 p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG 244 (608)
.++||++++.+++.+..+...+++|++.-+ |+.++
T Consensus 108 -~s~PEtr~l~~~~~~~~pd~~iDlH~~~~~--y~~~~ 142 (231)
T cd06239 108 -LSQPESRLLRDVYDGFQPDFCFNLHDQRTI--YGVEN 142 (231)
T ss_pred -CChHHHHHHHHHHHhcCCEEEEEECCCCCc--cCCCC
Confidence 368999999999998888889999976544 44443
No 79
>cd06231 Peptidase_M14-like_4 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.62 E-value=2.2e-15 Score=150.45 Aligned_cols=122 Identities=20% Similarity=0.269 Sum_probs=98.6
Q ss_pred eeeeecccccc-CeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHH
Q psy7679 142 TRLYSVGQSVE-KRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFI 220 (608)
Q Consensus 142 ~~l~~ig~s~~-gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l 220 (608)
.++..+|+... +++|+++.. .+++..++.+++.|++||+|+. |. .+++.++
T Consensus 15 ~~~~~~g~~~~~~~pL~~l~~-~~~~~~~p~vlI~gGiHG~E~~--------------G~-------------~a~l~~l 66 (236)
T cd06231 15 LDVREYGQLAYQSYPLYALKS-RGWDSDLPRVLITAGIHGDEPA--------------GP-------------LGALEFL 66 (236)
T ss_pred eEEEEccccccCCeeEEEEEc-CCCCCCCCEEEEECCCCCCcHH--------------HH-------------HHHHHHH
Confidence 45667787654 999998865 4556567889999999999999 74 3444444
Q ss_pred hcC--CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--
Q psy7679 221 KNN--PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDI-- 296 (608)
Q Consensus 221 ~~~--~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~-- 296 (608)
... .++...+++ ++|++||||+.. ..|+|+.|+||||||+. ..++||++++++++.+.
T Consensus 67 ~~l~~~~l~~~~i~---ivP~vNPdG~~~-------~~R~n~~g~DLNR~F~~--------~~~~~E~~al~~~~~~~~~ 128 (236)
T cd06231 67 RAAALELAQDVNLS---VYPCINPSGFEA-------ITRWNRNGIDPNRSFRS--------ESPSPEVRLLMEWLRRLGA 128 (236)
T ss_pred HHHHHHHhcCCeEE---EEECcChhHHhc-------CccCCCCCccccCCCCC--------CCCCHHHHHHHHHHHHhCC
Confidence 432 367789999 999999999764 46889999999999974 46899999999999988
Q ss_pred CcEEEEEEcccce
Q psy7679 297 PFVLSANLHGGSL 309 (608)
Q Consensus 297 ~~~~~~~~Hs~~~ 309 (608)
++.+++|+|+++.
T Consensus 129 ~~~~~IDLH~~~~ 141 (236)
T cd06231 129 AFDLHIDLHEDTE 141 (236)
T ss_pred CcEEEEEeCCCCC
Confidence 7999999999983
No 80
>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.60 E-value=7e-16 Score=157.06 Aligned_cols=132 Identities=21% Similarity=0.192 Sum_probs=96.2
Q ss_pred CCceeEEEecCCC--Ccceeeeec--cceEEEecCCCCccccccccccccccccccccCCCHHHHHHHHHHHHHhCCCce
Q psy7679 67 QNRDLWALQGGGT--NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLT 142 (608)
Q Consensus 67 eGR~i~~l~Is~~--~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~ 142 (608)
.+.+|++++||+. .++.+++.+ |+|||+++..+.+++++|+. .|.....+.++|
T Consensus 8 ~~~pi~~v~ig~~~~~~p~v~i~~giHg~E~ig~~~~l~~l~~L~~-----------~~~~d~~~~~ll----------- 65 (273)
T cd03862 8 LRFPIYALELGSPDPKAPVLGLVGGVHGLERIGTQVLLAFLESLLE-----------RLRWDKLLQELL----------- 65 (273)
T ss_pred CcceeEEEEecCCCCCCCEEEEEcCcCCCcHHHHHHHHHHHHHHHH-----------hccccHHHHHHH-----------
Confidence 3578999999865 357788888 99999977666665555543 122222333333
Q ss_pred eeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCC-----------CCcccccCCCC-CCch
Q psy7679 143 RLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDS-----------SSERREQPLNV-KKLE 210 (608)
Q Consensus 143 ~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~-----------~~~~~~~~G~~-p~se 210 (608)
++.+++ ++|..||||. +...+.+++|||||||||..|.. .+++..|+|+. |+||
T Consensus 66 ---------~~~~i~-ivP~vNPdG~----~~~~R~n~~GVDLNRNfp~~~~~~~~~~~~G~~~~p~~~~Y~G~~~~~sE 131 (273)
T cd03862 66 ---------EKVRLV-FLPLVNPVGM----ALKTRSNGNGVDLMRNAPVDAEDKPPFLVGGQRLSPRLPWYRGKNGAGME 131 (273)
T ss_pred ---------hCCeEE-EEeccCcCHH----HhcccCCCCCcccCCCCCCCccccccccccCccCCCCCCCCCCCCCCCCC
Confidence 334455 5599999994 44577889999999999998752 12334578987 9999
Q ss_pred HHHHHHHHHHhcC----Cceeeceeeee
Q psy7679 211 PETLAMISFIKNN----PFVLSGNLHGG 234 (608)
Q Consensus 211 PEt~al~~~l~~~----~~l~~~~~h~g 234 (608)
||++++++++.+. ++...+++|+|
T Consensus 132 pEt~al~~~~~~~~~~~~~~~~ld~HSg 159 (273)
T cd03862 132 LEAQALCRFVRELLFESPFSIALDCHSG 159 (273)
T ss_pred HHHHHHHHHHHHhcccCCeEEEEEECCC
Confidence 9999999999874 68899999974
No 81
>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.56 E-value=2.4e-15 Score=158.55 Aligned_cols=62 Identities=26% Similarity=0.342 Sum_probs=52.0
Q ss_pred cccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC-CceeeceeeeeeeeeecCCC
Q psy7679 181 NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGGAIVASYPFD 243 (608)
Q Consensus 181 ~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~-~~l~~~~~h~g~ivp~~NpD 243 (608)
.|+|||||||+.|.... ...++|+.||||||++|+.+|+.++ .+...+++|++..+.++++.
T Consensus 208 ~GvDlNRNf~~~W~~~~-~~~y~G~~p~SEpEt~av~~~~~~~~~i~~~is~Hsyg~~il~P~g 270 (360)
T cd06905 208 EGLDFNRNFPHDWRPEG-EQYGAGPFPFSEPETRAVVEFWTDHPNINGFISYHTYSGVILRPYS 270 (360)
T ss_pred cCCCcccCcCCCCCCCC-CcCCCCCCCCChHHHHHHHHHHhcCCCeEEEEEecCCcCeeeeCCC
Confidence 59999999999997542 2346899999999999999999887 57788999988888888653
No 82
>PF13715 DUF4480: Domain of unknown function (DUF4480)
Probab=99.56 E-value=2.6e-14 Score=121.15 Aligned_cols=86 Identities=29% Similarity=0.426 Sum_probs=78.4
Q ss_pred eeeEEECC-CCCcccCceEEEcCceeeEEeCCCeeEEEecCCceEEEEEEecceeeEEEEEEEecCCcceEEEEEEeccc
Q psy7679 430 VAGFVKGR-EGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAIHQVSVENSTKATQLNITLARIN 508 (608)
Q Consensus 430 I~G~V~D~-~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~s~~GY~~~~~~v~v~~~~~~~~~~i~L~~~~ 508 (608)
|+|+|+|+ +|+||++|+|.+.++..++.||.+|.|.+.+++|.|+|.+|++||++.+..+... .++...+++.|.++.
T Consensus 2 i~G~V~d~~t~~pl~~a~V~~~~~~~~~~Td~~G~F~i~~~~g~~~l~is~~Gy~~~~~~i~~~-~~~~~~~~i~L~~~~ 80 (88)
T PF13715_consen 2 ISGKVVDSDTGEPLPGATVYLKNTKKGTVTDENGRFSIKLPEGDYTLKISYIGYETKTITISVN-SNKNTNLNIYLEPKS 80 (88)
T ss_pred EEEEEEECCCCCCccCeEEEEeCCcceEEECCCeEEEEEEcCCCeEEEEEEeCEEEEEEEEEec-CCCEEEEEEEEeeCc
Confidence 89999995 5999999999999999999999999999888899999999999999999998886 454457899999998
Q ss_pred ccccccCCCCCccccee
Q psy7679 509 LIAWSHQHDFSITDNIE 525 (608)
Q Consensus 509 ~~~~~~~~~~~l~evvv 525 (608)
.+ |+||+|
T Consensus 81 ~~---------L~eVvV 88 (88)
T PF13715_consen 81 NQ---------LDEVVV 88 (88)
T ss_pred cc---------CCeEEC
Confidence 88 999986
No 83
>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.55 E-value=4.2e-15 Score=151.34 Aligned_cols=135 Identities=21% Similarity=0.177 Sum_probs=101.8
Q ss_pred HHHHHHHHhCCCceEEEEcccccCCceeEEEecCCC-----------Ccceeeeec--cceEEEecCCCCcccccccccc
Q psy7679 44 KFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT-----------NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNK 110 (608)
Q Consensus 44 ~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~-----------~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~ 110 (608)
+||++|+++|| .+++.+||+|.|||+|++++||++ .|+.+++.+ |++||.+...
T Consensus 1 a~~~~La~~~~-~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~~~~~kp~v~i~agiH~~E~~G~~a------------ 67 (266)
T cd06241 1 AFLERLAAASP-LIRLESFGKTPEGRPLHLLVLSKDGAFTPEEAKRSGKPVVLVQAGIHAGEIDGKDA------------ 67 (266)
T ss_pred CHHHHHHHhCC-ceEEEEeEeCCCCCeeEEEEEecCCccchhhhcccCCCEEEEeCCcCCCCchHHHH------------
Confidence 48999999986 579999999999999999999863 467788887 9999985433
Q ss_pred ccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeE-----------EeCCCC
Q psy7679 111 YGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLAR-----------FVGRNN 179 (608)
Q Consensus 111 ~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~-----------~~g~~h 179 (608)
+..++++|+..... ...++..++ ++|+.||||++...- ...+.+
T Consensus 68 ----------------~~~ll~~L~~~~~~--------~ll~~~~i~-ivP~~NpDG~~~~~~~~r~~q~gp~~~~~R~n 122 (266)
T cd06241 68 ----------------GLMLLRDLADGKKD--------ALLDKVVLV-FIPVFNVDGHERRSPYNRTNQNGPEEYGWRGN 122 (266)
T ss_pred ----------------HHHHHHHHHhcchH--------HHHhCCEEE-EEeCCCccHHHhcccccccccCCCCccCceec
Confidence 34444555433211 112444455 569999999975411 125778
Q ss_pred CcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceee
Q psy7679 180 ANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLH 232 (608)
Q Consensus 180 a~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h 232 (608)
++++||||||+.. ++||++++++++....+...+++|
T Consensus 123 a~g~DLNRdf~~~----------------~~pEtra~~~~~~~~~p~~~iD~H 159 (266)
T cd06241 123 ARNLNLNRDFIKL----------------DAPEMRAFAKLFNKWNPDLFIDNH 159 (266)
T ss_pred ccceecCCCCccc----------------CCHHHHHHHHHHHHhCCCEEEEec
Confidence 9999999999842 469999999999988888889999
No 84
>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=99.49 E-value=3e-14 Score=146.03 Aligned_cols=128 Identities=16% Similarity=0.056 Sum_probs=93.2
Q ss_pred ceEEEEcccccCCceeEEEecCCC---------------------------Ccceeeeec--cceEEEecCCCCcccccc
Q psy7679 56 KVKLHSIGKSVQNRDLWALQGGGT---------------------------NKNKVSIIS--LYRLVTVSTTPAPIEEDI 106 (608)
Q Consensus 56 ~~~~~~iG~S~eGR~i~~l~Is~~---------------------------~~~~v~~~~--hare~~~~~~~~~~~~~l 106 (608)
..+...||+|.|||+|++|+|++. +|+.|++++ |+|||+++.....++..|
T Consensus 15 y~~~~~Lg~S~eGR~i~lLtITs~~~~~~~~~~~~~~l~~~~~~~~~~~~~~K~~V~I~ariHp~E~~~s~~~~~ll~~L 94 (304)
T cd06236 15 YYHREVLCYSLEGRRIDLLTITSCHGKLEQREPRLEGLFPDRKTPRPHFFFGKPVVFISSRVHPGETPSSFVFNGFLKFL 94 (304)
T ss_pred EEEEEEeEECCCCCceEEEEEecCcccccccccccccccccccccccccccCCcEEEEECCcCCCCchHHHHHHHHHHHH
Confidence 378999999999999999999863 356788888 999999765554444444
Q ss_pred ccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccC
Q psy7679 107 KKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLN 186 (608)
Q Consensus 107 ~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLN 186 (608)
+.. ..++...+++. . +|.++|+.||||+..+. .+.+|+|+|||
T Consensus 95 l~~-------------~d~~a~~L~~~--------------------~-~~~IvPmlNPDGv~~g~---~R~~~~G~DLN 137 (304)
T cd06236 95 LNK-------------DDPRAALLRRR--------------------F-VFKLIPMLNPDGVYRGH---YRTDTRGVNLN 137 (304)
T ss_pred HhC-------------CCHHHHHHHhC--------------------C-eEEEEEeEcccccccCc---cccCCcCCCcC
Confidence 330 01122222222 2 56677999999998763 36789999999
Q ss_pred CCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC----Cceeeceeee
Q psy7679 187 RNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN----PFVLSGNLHG 233 (608)
Q Consensus 187 RNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~----~~l~~~~~h~ 233 (608)
|+|. ++.|+++||+.++.+++... ++...+++||
T Consensus 138 R~y~-------------~p~~~~~Pei~aik~~i~~~~~~~~i~~yiDlH~ 175 (304)
T cd06236 138 RVYL-------------NPDPELHPSIYAIKKLILYLHEESRLAFYIDLHA 175 (304)
T ss_pred cCCC-------------CCCcccCHHHHHHHHHHHHhhccCCceEEEEecc
Confidence 9843 45688999999998888753 5888899994
No 85
>cd06232 Peptidase_M14-like_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.48 E-value=1.1e-13 Score=134.82 Aligned_cols=117 Identities=19% Similarity=0.109 Sum_probs=93.3
Q ss_pred cccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCcee
Q psy7679 148 GQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVL 227 (608)
Q Consensus 148 g~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~ 227 (608)
.+|++||+|+++.+ .+.++++++.|++|||||. |... ++.+++-+.. +.
T Consensus 21 a~S~EGR~I~~l~i----~~~Kp~I~I~gGvHarEwi--------------g~~~----------al~fi~~L~~---~~ 69 (240)
T cd06232 21 ARSRQGRPVTGRYV----AGLDHPVVISAGQHANETS--------------GVVG----------ALRAAEALAA---RP 69 (240)
T ss_pred ccccCCCeeeEEEe----cCCCcEEEEeCCcCCCcch--------------hHHH----------HHHHHHHHhc---cC
Confidence 46889999999887 2347889999999999999 7544 5666665554 67
Q ss_pred eceeeeeeeeeecCCCCCcc-CCCCCCC------CCCCcccccCCC-CCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcE
Q psy7679 228 SGNLHGGAIVASYPFDDSKC-LGDRSSM------IGRKNAHDVDLN-RNFPGQFGPSKYNSVPEPETLAVEKWLQDIPFV 299 (608)
Q Consensus 228 ~~~~h~g~ivp~~NpDG~~~-~~~~~~~------~~R~n~~GvDLN-Rnf~~~w~~~~~~~~sepEt~ai~~~~~~~~~~ 299 (608)
.+++. ++|++|||||+. ..-+.|. ..|.|+.|.|+| |++. ++ +|+++++.++.+..+.
T Consensus 70 ~~n~~---I~P~vNPDGYe~~~~L~r~nP~~~hHaaR~~A~g~D~~fr~~~---------~~--~Es~~~~~~~~~~~~~ 135 (240)
T cd06232 70 GAHFA---LIPLENPDGYALHERLRAEHPRHMHHAARYTALGDDLEYREFP---------PF--GEREARHQALAKSGAQ 135 (240)
T ss_pred CceEE---EEEeeCCcHHHhhchhhccCcccccchhhhcccCCCcccccCC---------cc--hHHHHHHHHHHhhCCc
Confidence 89999 999999999872 2122332 338899999999 9883 55 8999999999999999
Q ss_pred EEEEEcccce
Q psy7679 300 LSANLHGGSL 309 (608)
Q Consensus 300 ~~~~~Hs~~~ 309 (608)
+.+|+|++-.
T Consensus 136 ~hiDlHeyp~ 145 (240)
T cd06232 136 LHVNLHGYPA 145 (240)
T ss_pred EEEECCCCCc
Confidence 9999998543
No 86
>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N
Probab=99.47 E-value=4.8e-14 Score=141.53 Aligned_cols=136 Identities=16% Similarity=0.140 Sum_probs=91.0
Q ss_pred CCCceEEEEcccccCCceeEEEecCCC--------Ccceeeeec--cceEEEecCCCCccccccccccccccccccccCC
Q psy7679 53 NPSKVKLHSIGKSVQNRDLWALQGGGT--------NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPVQFSHH 122 (608)
Q Consensus 53 ~p~~~~~~~iG~S~eGR~i~~l~Is~~--------~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~~~~y~ 122 (608)
.++.+++.+||+|+|||+|++|+|++. .|+.|++++ |||||.++ ++.+.+++. -..
T Consensus 10 ~~~~~~~~~lg~S~eGR~i~~LtIt~~~~~~~~~~~K~~I~I~ariHp~E~~~s----~~~~gll~~----------L~~ 75 (261)
T cd06907 10 RSKFCKLRVLCRTLAGNTVYLLTITSPSSNPSLAAAKKAVVLTARVHPGETNAS----WMMKGFLDF----------LTS 75 (261)
T ss_pred cCCceEEEEEEECCCCCeeeEEEEcCCCccccccCCCCEEEEECCcCCChHHHH----HHHHHHHHH----------Hhc
Confidence 356899999999999999999999863 367899988 99997532 222222220 000
Q ss_pred CHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCccccc
Q psy7679 123 NYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQ 202 (608)
Q Consensus 123 ~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~ 202 (608)
+.++...+++.+ +|.++|+.||||+..+ ..+.++.|+||||||...|.
T Consensus 76 ~~~~a~~Lr~~~---------------------~f~IvPmlNPDGv~~G---~~R~~~~G~DLNR~w~~p~~-------- 123 (261)
T cd06907 76 NSPDAQLLRDTF---------------------IFKIVPMLNPDGVIVG---NYRCSLAGRDLNRNYKTPLK-------- 123 (261)
T ss_pred CCHHHHHHHhcC---------------------CEEEEEeecCcccccc---CCcCCCcCCCCCcCCCCCCc--------
Confidence 112222222222 5667899999998766 44789999999999997662
Q ss_pred CCCCCCchHHHHH---HHHHHhc-CCceeeceeeeeeeeee
Q psy7679 203 PLNVKKLEPETLA---MISFIKN-NPFVLSGNLHGGAIVAS 239 (608)
Q Consensus 203 ~G~~p~sePEt~a---l~~~l~~-~~~l~~~~~h~g~ivp~ 239 (608)
.+.||+.+ +++.+.+ .++...+++||.+....
T Consensus 124 -----~~~P~i~~~k~li~~l~~~~~i~~ylDlHghs~~~~ 159 (261)
T cd06907 124 -----DSFPTIWYTKNMVKRLLEEREVILYCDLHGHSRKNN 159 (261)
T ss_pred -----ccCchHHHHHHHHHHHHhcCCeEEEEEeccchhccc
Confidence 34466444 4444432 36888999997665543
No 87
>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.44 E-value=7.4e-14 Score=139.30 Aligned_cols=117 Identities=19% Similarity=0.216 Sum_probs=85.8
Q ss_pred cccccCCceeEEEecCCCC---------cceeeeec--cceEEEecCCCCccccccccccccccccccccCCCHHHHHHH
Q psy7679 62 IGKSVQNRDLWALQGGGTN---------KNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAE 130 (608)
Q Consensus 62 iG~S~eGR~i~~l~Is~~~---------~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~~~~y~~~~~i~~~ 130 (608)
||+|+|||+|++++||+.. ++.+++.+ |++||++...+..++.+|.. ....++..+
T Consensus 1 iG~S~eGRpi~~l~i~~~~~~~~~~~~~~p~v~i~~giHG~E~~G~~a~l~ll~~L~~-------------~~~~~~~~l 67 (236)
T cd06243 1 IGTSQRGRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEPAGREALLIIARDLAF-------------GEDEELVPL 67 (236)
T ss_pred CccCCCCCeeEEEEEecCCCccccccCCCCEEEEECCcCCCChHHHHHHHHHHHHHHh-------------cCCHHHHHH
Confidence 7999999999999998753 46777776 99999966554444333321 011122232
Q ss_pred HHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCch
Q psy7679 131 LEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLE 210 (608)
Q Consensus 131 L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~se 210 (608)
| ++..+ +++|+.||||.+. .++.+++++||||||+. +++
T Consensus 68 L--------------------~~~~i-~ivP~~NPDG~~~----~~R~n~~g~DlNRd~~~----------------~~~ 106 (236)
T cd06243 68 L--------------------HQTTV-LFVPTANPDGREA----DTRSNADGIDINRDHLL----------------LNT 106 (236)
T ss_pred H--------------------hcceE-EEEeCcCccHhhc----CCcCCCCCcccCCCCCC----------------CCC
Confidence 2 33334 4679999999876 36788999999999973 457
Q ss_pred HHHHHHHHHHhcCCceeeceee
Q psy7679 211 PETLAMISFIKNNPFVLSGNLH 232 (608)
Q Consensus 211 PEt~al~~~l~~~~~l~~~~~h 232 (608)
||++++++++.+......+++|
T Consensus 107 pEt~al~~~~~~~~p~~~iDlH 128 (236)
T cd06243 107 PEAQALASVLRDYRPDVVVDAH 128 (236)
T ss_pred HHHHHHHHHHHhcCCEEEEEeC
Confidence 9999999999998888888999
No 88
>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.43 E-value=9.5e-14 Score=139.57 Aligned_cols=62 Identities=32% Similarity=0.343 Sum_probs=51.6
Q ss_pred cCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeecee
Q psy7679 152 EKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNL 231 (608)
Q Consensus 152 ~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~ 231 (608)
++..+ .+.|+.||||.+. .++.+++++||||||... ++||++++++++.+..+...+++
T Consensus 108 ~~~~i-~i~P~~NPDG~~~----~~R~Na~G~DLNRD~~~~----------------sqpEt~av~~~~~~w~P~~~~dl 166 (268)
T cd06244 108 EKVIF-LFNVTENPDGRVA----GTRENANGFDLNRDNSFQ----------------TQPETQAIVALIAEWNPASFLDL 166 (268)
T ss_pred hcCEE-EEEecccCCccee----eeecCCCccccCCCCCcc----------------cCHHHHHHHHHHHHhCCeEEEEe
Confidence 44444 4779999999865 478899999999999642 67999999999999988899999
Q ss_pred eee
Q psy7679 232 HGG 234 (608)
Q Consensus 232 h~g 234 (608)
||.
T Consensus 167 Hg~ 169 (268)
T cd06244 167 HGY 169 (268)
T ss_pred CCC
Confidence 953
No 89
>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.28 E-value=3e-12 Score=127.81 Aligned_cols=118 Identities=26% Similarity=0.281 Sum_probs=84.6
Q ss_pred cccccCCceeEEEecCCC-----------Ccceeeeec--cceEEEecCCCCccccccccccccccccccccCCCHHHHH
Q psy7679 62 IGKSVQNRDLWALQGGGT-----------NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQ 128 (608)
Q Consensus 62 iG~S~eGR~i~~l~Is~~-----------~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~~~~y~~~~~i~ 128 (608)
||+|+|||+|++++||++ +++++++.+ |++|+.+... +.
T Consensus 1 iG~S~eGRpi~~~~i~~~~~~~~~~~~~~~k~~v~i~~giHg~E~~g~~a----------------------------~~ 52 (226)
T cd03857 1 IGKSVEGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNESAGSDA----------------------------LL 52 (226)
T ss_pred CccCCCCCeEEEEEEeCCccccccccccCCCcEEEEECCcCCCCchHHHH----------------------------HH
Confidence 799999999999999873 345677776 8888775433 34
Q ss_pred HHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCC
Q psy7679 129 AELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKK 208 (608)
Q Consensus 129 ~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~ 208 (608)
.+++.|+....... ...++..++ ++|+.||||.+.. .+.+++++||||||+..
T Consensus 53 ~l~~~l~~~~~~~~------~ll~~~~i~-ivP~~NPDG~~~~----~R~n~~g~DLNRd~~~~---------------- 105 (226)
T cd03857 53 ELLRQLASASDEEA------KMLENIVIV-LIPRANPDGAALF----TRENANGLDLNRDFLKL---------------- 105 (226)
T ss_pred HHHHHHHhCCHHHH------HHHhCCEEE-EEeccCCChHHhc----cccCCCcccCCCCCCCc----------------
Confidence 44444443221100 111334455 5699999998763 67888999999999863
Q ss_pred chHHHHHHHHHHhcCCceeeceeeee
Q psy7679 209 LEPETLAMISFIKNNPFVLSGNLHGG 234 (608)
Q Consensus 209 sePEt~al~~~l~~~~~l~~~~~h~g 234 (608)
++||++++.+++.+......+++|++
T Consensus 106 ~~pEt~~~~~~~~~~~p~~~iDlH~~ 131 (226)
T cd03857 106 TQPETRAVREVFIEWKPQFFIDLHEY 131 (226)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCC
Confidence 46999999999998877888999943
No 90
>KOG2650|consensus
Probab=99.28 E-value=5.7e-12 Score=134.11 Aligned_cols=89 Identities=25% Similarity=0.233 Sum_probs=74.3
Q ss_pred EEEEEeeCCCCCccce-----eEEeC------CCCCcccccCCCCCCCcCC----CCccc--ccCCCCCCchHHHHHHHH
Q psy7679 156 LWVLVYNDEEGSCNSL-----ARFVG------RNNANGVDLNRNFPDQFDS----SSERR--EQPLNVKKLEPETLAMIS 218 (608)
Q Consensus 156 i~~l~~~~npdg~~~~-----~~~~g------~~ha~evdLNRNf~~~w~~----~~~~~--~~~G~~p~sePEt~al~~ 218 (608)
.|.+.|..||||++++ +|... +..|.|+||||||+++|+. +.++| .|+|++||||||++++.+
T Consensus 214 dwyI~Pv~NPDGYeYS~t~~R~WRKnRs~~~~~~~C~GvDlNRNfd~~W~~~~Gas~~PCse~Y~G~~pfSEpEt~av~~ 293 (418)
T KOG2650|consen 214 DWYILPVVNPDGYEYSRTTDRLWRKNRSPNGCASRCIGVDLNRNFDFHWGGGKGASSDPCSETYAGPSPFSEPETRAVRD 293 (418)
T ss_pred cEEEEeeecCCcceeeecccccccccCCCCCCCCeeeCCCCCCCccCcCCCCCCCCCCCCccccCCCCCCCcHHHHHHHH
Confidence 4678899999999987 55422 2358999999999999975 23445 579999999999999999
Q ss_pred HHhcC--CceeeceeeeeeeeeecCCCC
Q psy7679 219 FIKNN--PFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 219 ~l~~~--~~l~~~~~h~g~ivp~~NpDG 244 (608)
++.+. .+...+++|+++.+.+||++-
T Consensus 294 fi~~~~~~i~~yislHSYsQ~llyPyg~ 321 (418)
T KOG2650|consen 294 FITSFENNIKAYISLHSYSQLLLYPYGY 321 (418)
T ss_pred HHHhcCcceEEEEEecccceeEEecccc
Confidence 99976 478999999999999999865
No 91
>PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A.
Probab=99.27 E-value=2.3e-11 Score=101.42 Aligned_cols=75 Identities=37% Similarity=0.647 Sum_probs=60.3
Q ss_pred eeeEEECCCCCcccCceEEEc----CceeeEEeCCCeeEEEe-cCCceEEEEEEecceeeEEE-EEEEecCCcceEEEEE
Q psy7679 430 VAGFVKGREGEGVAGASIAVE----GLGHVVYSAQDGDYWRL-LAPGNYTLHVSAPGYEPAIH-QVSVENSTKATQLNIT 503 (608)
Q Consensus 430 I~G~V~D~~g~pl~~A~V~i~----g~~~~~~Td~~G~f~~~-l~~g~y~l~~s~~GY~~~~~-~v~v~~~~~~~~~~i~ 503 (608)
|+|+|+|++|+||++|.|.+. +....+.||.+|.|.+. +++|.|+|.+++.||.+... .+.+. .++...++|.
T Consensus 2 I~G~V~d~~g~pv~~a~V~l~~~~~~~~~~~~Td~~G~f~~~~l~~g~Y~l~v~~~g~~~~~~~~v~v~-~~~~~~~~i~ 80 (82)
T PF13620_consen 2 ISGTVTDATGQPVPGATVTLTDQDGGTVYTTTTDSDGRFSFEGLPPGTYTLRVSAPGYQPQTQENVTVT-AGQTTTVDIT 80 (82)
T ss_dssp EEEEEEETTSCBHTT-EEEET--TTTECCEEE--TTSEEEEEEE-SEEEEEEEEBTTEE-EEEEEEEES-SSSEEE--EE
T ss_pred EEEEEEcCCCCCcCCEEEEEEEeeCCCEEEEEECCCceEEEEccCCEeEEEEEEECCcceEEEEEEEEe-CCCEEEEEEE
Confidence 899999999999999999999 34457899999999886 99999999999999999997 58888 6777788998
Q ss_pred Ee
Q psy7679 504 LA 505 (608)
Q Consensus 504 L~ 505 (608)
|+
T Consensus 81 L~ 82 (82)
T PF13620_consen 81 LE 82 (82)
T ss_dssp EE
T ss_pred EC
Confidence 85
No 92
>cd06904 M14_MpaA_like Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.
Probab=99.19 E-value=3.7e-11 Score=115.59 Aligned_cols=92 Identities=24% Similarity=0.258 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCc--ccccC
Q psy7679 126 QMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSE--RREQP 203 (608)
Q Consensus 126 ~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~--~~~~~ 203 (608)
.+..+++.|.... .++.+++ ++|+.||||.+. ..+.+++++|||||||..|..... ...++
T Consensus 17 ~~~~l~~~l~~~~------------l~~~~i~-ivP~~NPdG~~~----~~R~n~~gvDLNRnFp~~~~~~~~~~~~~~~ 79 (178)
T cd06904 17 DLEELLRILPGLI------------LRGLSWY-VIPVLNPDGLLR----ATRCNANGVDLNRNFPTKDWPPGASRYRRYP 79 (178)
T ss_pred HHHHHHHHHHHHh------------hcCCeEE-EEeCcCccHHhh----CcccCCCCcChhhcCCccccccCCCcccccC
Confidence 4556666665432 2344566 459999999876 356678899999999999974422 23578
Q ss_pred CCCCCchHHHHHHHHHHhcCCceeeceeeee
Q psy7679 204 LNVKKLEPETLAMISFIKNNPFVLSGNLHGG 234 (608)
Q Consensus 204 G~~p~sePEt~al~~~l~~~~~l~~~~~h~g 234 (608)
|+.|+||||++++++++.+..+...+++|++
T Consensus 80 G~~~~sepEt~al~~~~~~~~~~~~idlHs~ 110 (178)
T cd06904 80 GPKPGSEPESRALMDLIERFKPDVVVSFHAP 110 (178)
T ss_pred CCCCCCCHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 9999999999999999998878888999954
No 93
>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna
Probab=99.02 E-value=3.2e-10 Score=114.49 Aligned_cols=135 Identities=13% Similarity=0.117 Sum_probs=88.8
Q ss_pred HHHHHHhCCCceEEEEcccccCCceeEEEecCCC-------------Ccceeeeec--cceE----EEecCCCCcccccc
Q psy7679 46 LVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGT-------------NKNKVSIIS--LYRL----VTVSTTPAPIEEDI 106 (608)
Q Consensus 46 l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~-------------~~~~v~~~~--hare----~~~~~~~~~~~~~l 106 (608)
|+.....-+...+...+++|.+||++.+|.|++. .|+.|++++ |+|| |+.. .+
T Consensus 4 l~~~~~~~~~y~~~~~Lc~Tl~G~~v~lltIt~~~~~~~~~~~~~~~~kp~I~I~ARvHPgEt~~Swi~~--------g~ 75 (278)
T cd06906 4 LESLHDPQQIYFRQQVLCETLGGNSCPLLTITAMPESNYYEHICQFRNRPYIFLSARVHPGETNASWVMK--------GT 75 (278)
T ss_pred HhhhcCCcccEEeeecceeccCCCceeEEEEeCCCccccccccccccCCcEEEEEcccCCCcchHHHHHH--------HH
Confidence 3444444455689999999999999999999863 356788888 9999 5532 22
Q ss_pred ccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccC
Q psy7679 107 KKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLN 186 (608)
Q Consensus 107 ~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLN 186 (608)
+. +-..+.++...+++++ +|.++|+.||||+..+ ..+.+..|+|||
T Consensus 76 l~----------~L~~~d~~a~~Lr~~~---------------------~f~IvPmlNPDGvv~G---n~Rc~~~G~DLN 121 (278)
T cd06906 76 LE----------FLMSSSPTAQSLRESY---------------------IFKIVPMLNPDGVING---NHRCSLSGEDLN 121 (278)
T ss_pred HH----------HHhCCCHHHHHHHHhC---------------------cEEEEeeecCccceec---ccccCCCCCCCC
Confidence 21 0011223344444443 5778899999998644 234455899999
Q ss_pred CCCCCCcCCCCcccccCCCCCCchHH---HHHHHHHHhcC--Cceeeceeeeee
Q psy7679 187 RNFPDQFDSSSERREQPLNVKKLEPE---TLAMISFIKNN--PFVLSGNLHGGA 235 (608)
Q Consensus 187 RNf~~~w~~~~~~~~~~G~~p~sePE---t~al~~~l~~~--~~l~~~~~h~g~ 235 (608)
|||...- .+ ..|| ++++++++.+. .++..+++||.+
T Consensus 122 R~w~~p~-----~~--------~~P~i~~~k~l~~~l~~~~~~~~~yiDlHghs 162 (278)
T cd06906 122 RQWQSPN-----PE--------LHPTIYHTKGLLQYLAAIKRSPLVYCDYHGHS 162 (278)
T ss_pred CCCCCCC-----cc--------cChHHHHHHHHHHHHHHhCCCceEEEeecccc
Confidence 9987321 11 2243 67777887753 577889999644
No 94
>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring
Probab=98.97 E-value=1.6e-09 Score=105.78 Aligned_cols=99 Identities=32% Similarity=0.432 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCC
Q psy7679 126 QMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLN 205 (608)
Q Consensus 126 ~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~ 205 (608)
.+..+++.|...++.. ....+...++ +.|..||||.+.. ..+.+.+++|||||||..|..
T Consensus 17 ~~~~~~~~l~~~~~~~------~~l~~~~~i~-iiP~~NPdG~~~~---~~R~n~~g~DlNR~f~~~~~~---------- 76 (196)
T cd00596 17 AALALLRRLLSNYGRD------TKLLENGRLL-VVPVLNPDGYEAV---NWRKNANGVDLNRNFPGLWGK---------- 76 (196)
T ss_pred HHHHHHHHHHHcCcch------HHHHhCCeEE-EEeCcccccceee---eEEeCCCCcCccCCCCCcccC----------
Confidence 3455666665544322 1122455566 4599999998764 345567799999999999863
Q ss_pred CCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCC
Q psy7679 206 VKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 206 ~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG 244 (608)
.++++||++++.+++.+.++...+++|++....+++++.
T Consensus 77 ~~~~~~e~~~~~~~~~~~~~~~~idlH~~~~~~~~p~~~ 115 (196)
T cd00596 77 GPLSEPETRALAELIQQRKVDLYIDLHSGSLGVLYPYSH 115 (196)
T ss_pred CCCCcHHHHHHHHHHHhCCceEEEEEecCCceEEecCCC
Confidence 467899999999999998899999999887666676665
No 95
>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=98.95 E-value=3.1e-10 Score=115.72 Aligned_cols=122 Identities=13% Similarity=0.081 Sum_probs=89.9
Q ss_pred cccccCCceeEEEecCCCC----------------------------cceeeeec--cceEEEecCCCCccccccccccc
Q psy7679 62 IGKSVQNRDLWALQGGGTN----------------------------KNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKY 111 (608)
Q Consensus 62 iG~S~eGR~i~~l~Is~~~----------------------------~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~ 111 (608)
||+|+|||+|.++.||++. ++.|++.+ |+|||+++..+.+++.+|+..
T Consensus 1 ~G~s~egR~l~~~~I~s~~n~~~l~~~~~~~~~la~p~~~~~~~~~~~~~v~i~~~iH~~E~~g~~~~l~l~~~L~~~-- 78 (271)
T cd06238 1 YGRTHEGRPLLLATITSPENIARLDQIREDHLALADPAATSSLISDQPVVVWLGYSVHGNEISGTEAALLTAYHLAAA-- 78 (271)
T ss_pred CCcCCCCCeeEEEEEeCHHHHHhHHHHHHHHHHhcCccccccccccCCcEEEEECCcCCCChHHHHHHHHHHHHHHHc--
Confidence 6999999999999998741 23566666 888888776666665555440
Q ss_pred cccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccc-ee------------------
Q psy7679 112 GFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNS-LA------------------ 172 (608)
Q Consensus 112 ~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~-~~------------------ 172 (608)
..+++.++|+++ ++.+.|+.||||++. .-
T Consensus 79 -----------~~~~~~~ll~~~---------------------~i~i~P~~NPDG~~r~~~w~~~~~~~~~~~d~~~r~ 126 (271)
T cd06238 79 -----------QGDEIEALLDNA---------------------VVLIDPMQNPDGRDRFVNWYNSNRGMVPSADPQDRE 126 (271)
T ss_pred -----------CCHHHHHHHhcC---------------------EEEEEeccCCCHHHHHHHhhhhccCCccccchhhhh
Confidence 123344444333 345679999999984 21
Q ss_pred ----EEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeee
Q psy7679 173 ----RFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHG 233 (608)
Q Consensus 173 ----~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~ 233 (608)
|..++.+|+++||||||. ++++||++++++++.+......+++|+
T Consensus 127 ~~~~wp~~R~n~~g~DLNRD~~----------------~~s~pEtra~~~~~~~~~p~~~~D~H~ 175 (271)
T cd06238 127 HNEPWPGGRTNHYWFDLNRDWL----------------PLTQPESRGRLAAYHEWRPNVVVDFHE 175 (271)
T ss_pred cccCCccccccccCcccccccc----------------cccCHHHHHHHHHHHhcCCeEEEEecc
Confidence 223567899999999997 367999999999999988888999995
No 96
>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases. This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding
Probab=98.93 E-value=2.8e-08 Score=105.85 Aligned_cols=128 Identities=16% Similarity=0.113 Sum_probs=77.7
Q ss_pred eEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCC--ceeecee
Q psy7679 154 RELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP--FVLSGNL 231 (608)
Q Consensus 154 r~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~--~l~~~~~ 231 (608)
+.|.++++.. .+..+.+++.+++||+|+. |... ...+++.+.... -...-++
T Consensus 14 ~~ipv~~~~g--~~~gp~v~i~agiHGdE~~--------------G~~~----------~~~L~~~l~~~~~~~~l~G~v 67 (359)
T cd06250 14 RELTVFRFGG--AGAGPKVYIQASLHADELP--------------GMLV----------LHHLIELLKKLEAEGRILGEI 67 (359)
T ss_pred EEEEEEEEeC--CCCCCEEEEEeccccCchH--------------HHHH----------HHHHHHHHhhhccccccCceE
Confidence 4455554432 1224789999999999999 7544 555666655430 1235578
Q ss_pred eeeeeeeecCCCCCccCCCCCCCCCCC-cccccCCCCCCCCCCCCC---------------------------CCCCCCc
Q psy7679 232 HGGAIVASYPFDDSKCLGDRSSMIGRK-NAHDVDLNRNFPGQFGPS---------------------------KYNSVPE 283 (608)
Q Consensus 232 h~g~ivp~~NpDG~~~~~~~~~~~~R~-n~~GvDLNRnf~~~w~~~---------------------------~~~~~se 283 (608)
. +||++||+|+.. ..+.|..+|. +..|.||||.||-.=+.. .+.....
T Consensus 68 ~---ivP~~Np~g~~~-~~~~~~~~R~~p~dg~dlNR~FPg~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 143 (359)
T cd06250 68 T---LVPVANPIGLNQ-RLGGFHLGRFDLASGTNFNRDFPDLADAVADFVEGHLTSDPAANVALVRQALREALAALLPPT 143 (359)
T ss_pred E---EEeCcChHHHHh-hccccccccccCCCCCccCcCCCCcchhhHHHhhhhcccchHHHHHHHHHHHHHHHhccCCCc
Confidence 8 999999999753 1223334565 468999999998531100 0000122
Q ss_pred HHHHHHHHHHHhC--CcEEEEEEcccceee
Q psy7679 284 PETLAVEKWLQDI--PFVLSANLHGGSLVA 311 (608)
Q Consensus 284 pEt~ai~~~~~~~--~~~~~~~~Hs~~~~i 311 (608)
-.++.+...+.+. ..++++|+|+++..+
T Consensus 144 ~~~~rla~~l~~~~~~aD~~IDLHsg~~~~ 173 (359)
T cd06250 144 ELQSTLRLTLQRLALDADIVLDLHCDDEAV 173 (359)
T ss_pred cHHHHHHHHHHHHhhcCCEEEECCCCCccC
Confidence 2233355555443 468999999998754
No 97
>cd06254 M14_ASTE_ASPA_like_4 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.91 E-value=2e-08 Score=104.09 Aligned_cols=218 Identities=17% Similarity=0.107 Sum_probs=118.2
Q ss_pred ceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC-CceeeceeeeeeeeeecCCCCCccC
Q psy7679 170 SLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGGAIVASYPFDDSKCL 248 (608)
Q Consensus 170 ~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~-~~l~~~~~h~g~ivp~~NpDG~~~~ 248 (608)
+.+++.+++||+|+. | ..++.++++.. +....-.+. ++|+.||.|+...
T Consensus 18 p~v~i~agvHG~E~~--------------G-------------~~~~~~l~~~l~~~~~~g~v~---~vp~~N~~a~~~~ 67 (288)
T cd06254 18 PTLAITAGVHGGEYP--------------G-------------IQALQKLAREIDPAKLSGTLI---IVHVLNLSGFYAR 67 (288)
T ss_pred CEEEEEecccCCchh--------------H-------------HHHHHHHHHhCCcccCeEEEE---EEeCcCHHHHHhc
Confidence 679999999999999 7 34444554443 222355566 8999999996531
Q ss_pred CCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CcEEEEEEcccc-eeeeecCCCCCCCCCC
Q psy7679 249 GDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDI---PFVLSANLHGGS-LVANYPYDDNQAMKPQ 324 (608)
Q Consensus 249 ~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~---~~~~~~~~Hs~~-~~i~yP~~~~~~~~~~ 324 (608)
. ..+....|.||||.||-... ..+++.++.++.+. ..++.+|+|+++ ...+.||.....
T Consensus 68 -~----r~~~~~d~~dlNR~fpg~~~--------g~~~~r~a~~~~~~~~~~~d~~iDlHs~~~~~~~~p~~~~~~---- 130 (288)
T cd06254 68 -T----PYIVPEDGKNLNRVFPGDKD--------GTLTERIAYFLTEEVIDKADFLIDLHSGDGNEQLRPYVYYPV---- 130 (288)
T ss_pred -C----cccCCCCCCchhhcCCCCCC--------CCHHHHHHHHHHHHHHhhCcEEEECCCCCCccccCceEEecC----
Confidence 0 11235689999999986422 23455555555432 478999999986 445677764321
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeecc--CcccchhhhccCeEEEEEeecCCCC
Q psy7679 325 VDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVS--GGMQDYNYIHANTLEITLELGCYKF 402 (608)
Q Consensus 325 ~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~--G~~~Dw~y~~~~~~~~t~El~~~~~ 402 (608)
...++ .+..+...+.+..... .+... ++...+.-...++.++|+|+|....
T Consensus 131 --~~~~~---~~~~~~~~a~~~~~~~----------------------i~~~~~~~~~~~~~a~~~G~~a~tiE~G~~~~ 183 (288)
T cd06254 131 --TGDED---VRTASLAAAFGIDHII----------------------IYRSRDRSGGSYNYAATRGIPAILLERGGLGT 183 (288)
T ss_pred --Ccchh---hhHHHHHHHhCCCCeE----------------------EecCCCCCccHHHHHHHcCCcEEEEECCCCCC
Confidence 01111 1122222222211100 00101 1222222346799999999998533
Q ss_pred CCCCCcchHHHhhhhhhhhhHHHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCce
Q psy7679 403 PPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGN 472 (608)
Q Consensus 403 P~~~~l~~~w~~N~~alls~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~ 472 (608)
-.. ...+.-..+++.++... ..|.|.. . +.+ ....+........++..|-|.....+|.
T Consensus 184 ~~~----~~~~~~~~gi~~~L~~l-g~l~~~~----~-~~~-~~~~~~~~~~~v~Ap~~G~~~~~~~~G~ 242 (288)
T cd06254 184 CDA----EDVEAYKDDIYNVLRHL-GMLEGKK----P-PEE-VPIPEIDDVYYVTSPASGLWYPFVKAGD 242 (288)
T ss_pred CCH----HHHHHHHHHHHHHHHHc-CCccCCC----C-CCC-CCceeccCCEEEecCCCeEEEEecCCCC
Confidence 222 23344566777777542 1233331 1 111 2222222223456788888866665665
No 98
>cd06231 Peptidase_M14-like_4 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=98.89 E-value=7.6e-09 Score=103.62 Aligned_cols=119 Identities=20% Similarity=0.247 Sum_probs=88.6
Q ss_pred CceEEEEcccccC-CceeEEEecCCC--Ccceeeeec--cceEEEecCCCCccccccccccccccccccccCCCHHHHHH
Q psy7679 55 SKVKLHSIGKSVQ-NRDLWALQGGGT--NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQA 129 (608)
Q Consensus 55 ~~~~~~~iG~S~e-GR~i~~l~Is~~--~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~~~~y~~~~~i~~ 129 (608)
....+..+|+..+ |++|+++++.+. +++++++.+ |++||.+.. .+..
T Consensus 13 ~~~~~~~~g~~~~~~~pL~~l~~~~~~~~~p~vlI~gGiHG~E~~G~~----------------------------a~l~ 64 (236)
T cd06231 13 SRLDVREYGQLAYQSYPLYALKSRGWDSDLPRVLITAGIHGDEPAGPL----------------------------GALE 64 (236)
T ss_pred cceEEEEccccccCCeeEEEEEcCCCCCCCCEEEEECCCCCCcHHHHH----------------------------HHHH
Confidence 3468899999776 999999999764 578888888 999988533 2445
Q ss_pred HHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCc
Q psy7679 130 ELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKL 209 (608)
Q Consensus 130 ~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~s 209 (608)
+++++...+. ++..++ +.|+.||||++. ..+.+++++||||||+. ..+
T Consensus 65 ~l~~l~~~~l------------~~~~i~-ivP~vNPdG~~~----~~R~n~~g~DLNR~F~~---------------~~~ 112 (236)
T cd06231 65 FLRAAALELA------------QDVNLS-VYPCINPSGFEA----ITRWNRNGIDPNRSFRS---------------ESP 112 (236)
T ss_pred HHHHHHHHHh------------cCCeEE-EEECcChhHHhc----CccCCCCCccccCCCCC---------------CCC
Confidence 5555543211 223344 569999999876 35667899999999987 124
Q ss_pred hHHHHHHHHHHhcC--Cceeeceeee
Q psy7679 210 EPETLAMISFIKNN--PFVLSGNLHG 233 (608)
Q Consensus 210 ePEt~al~~~l~~~--~~l~~~~~h~ 233 (608)
+||++++++++... ++...+++|+
T Consensus 113 ~~E~~al~~~~~~~~~~~~~~IDLH~ 138 (236)
T cd06231 113 SPEVRLLMEWLRRLGAAFDLHIDLHE 138 (236)
T ss_pred CHHHHHHHHHHHHhCCCcEEEEEeCC
Confidence 69999999999876 6888899993
No 99
>cd06233 Peptidase_M14-like_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=98.88 E-value=2.9e-08 Score=101.28 Aligned_cols=114 Identities=16% Similarity=0.160 Sum_probs=81.4
Q ss_pred CCCCccceeEEeCCCCCcc-cccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCC---ceeeceeeeeeeeee
Q psy7679 164 EEGSCNSLARFVGRNNANG-VDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP---FVLSGNLHGGAIVAS 239 (608)
Q Consensus 164 npdg~~~~~~~~g~~ha~e-vdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~---~l~~~~~h~g~ivp~ 239 (608)
++....+.+++.+++||.| .. | +..++.|+++.. +...+.+. +||+
T Consensus 46 g~~~~~~~l~i~sGvHG~Eg~~--------------G-------------s~~~~~ll~~~~~~~~~~~~~vi---~vh~ 95 (283)
T cd06233 46 GPADAKRLLVITSGTHGVEGFC--------------G-------------SAIQLALLRELLPRSLPAGVAVL---LVHA 95 (283)
T ss_pred cCCCCCcEEEEEecccCCcccc--------------h-------------HHHHHHHHHhcchhhccCCceEE---EEeC
Confidence 3333445788999999999 67 5 455666776652 44567888 9999
Q ss_pred cCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCC------------------------------------------
Q psy7679 240 YPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSK------------------------------------------ 277 (608)
Q Consensus 240 ~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~------------------------------------------ 277 (608)
+||.|..+ ..|.|.+||||||||-+...+-+
T Consensus 96 vNP~Gf~~-------~~R~nedgvDLNRnf~d~~~~~p~N~~Y~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~G~~a~~~ 168 (283)
T cd06233 96 LNPYGFAH-------LRRVNENNVDLNRNFLDFSAPLPENPGYAELHPLLLPPRWPPAAAAFAAKLLAYILKHGEKALKQ 168 (283)
T ss_pred cCHHHHhh-------cccCCCCCCChhhcccccCCCCCCCccHHHHhhhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999765 45889999999999976544210
Q ss_pred ----------C-----CCCCcHHHHHHHHHHHhC----CcEEEEEEcccceeeeecCCCC
Q psy7679 278 ----------Y-----NSVPEPETLAVEKWLQDI----PFVLSANLHGGSLVANYPYDDN 318 (608)
Q Consensus 278 ----------~-----~~~sepEt~ai~~~~~~~----~~~~~~~~Hs~~~~i~yP~~~~ 318 (608)
+ --..+.-++.+++++.++ ..+++||+|++-+ ||++.
T Consensus 169 A~~~GQY~~P~GlfyGG~~p~wS~~~L~~il~~~~~~~~~v~~iD~HTGlG----p~g~~ 224 (283)
T cd06233 169 ALSGGQYTHPDGLFYGGTAPQWSNRTLREILRRHLAGAERVAWIDVHTGLG----PWGYG 224 (283)
T ss_pred HHhCCCccCCCccccCCCCccHHHHHHHHHHHHhcccccEEEEEEeCCCCC----CCCCC
Confidence 0 223455577777777776 3679999999877 67753
No 100
>cd06232 Peptidase_M14-like_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=98.83 E-value=2.4e-09 Score=104.62 Aligned_cols=126 Identities=20% Similarity=0.118 Sum_probs=82.7
Q ss_pred CHHHHHHHHHHHHHhCCCceEEEEcccccCCceeEEEecCCCCcceeeeec--cceEEEecCCCCccccccccccccccc
Q psy7679 38 SFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGTNKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFII 115 (608)
Q Consensus 38 ~y~ei~~~l~~la~~~p~~~~~~~iG~S~eGR~i~~l~Is~~~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~ 115 (608)
++.+|...|.+| |.+ . .-.+|+|||+|++++| +.+|+.|++++ |+|||++.+++.++
T Consensus 3 ~~~~i~~~l~~~----~g~-~--~~a~S~EGR~I~~l~i-~~~Kp~I~I~gGvHarEwig~~~al~f------------- 61 (240)
T cd06232 3 SAGQIAYELAVL----PGI-E--FAARSRQGRPVTGRYV-AGLDHPVVISAGQHANETSGVVGALRA------------- 61 (240)
T ss_pred CHHHHHHHHhhc----CCc-c--ccccccCCCeeeEEEe-cCCCcEEEEeCCcCCCcchhHHHHHHH-------------
Confidence 456666655543 333 1 2567999999999999 46789999998 99999977665544
Q ss_pred cccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCcccee--EE--------eCCCCCccccc
Q psy7679 116 PVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLA--RF--------VGRNNANGVDL 185 (608)
Q Consensus 116 ~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~--~~--------~g~~ha~evdL 185 (608)
+++|+. .+.. .|++.|+.||||++... +. -++.++.+.|+
T Consensus 62 ---------------i~~L~~--------------~~~~-n~~I~P~vNPDGYe~~~~L~r~nP~~~hHaaR~~A~g~D~ 111 (240)
T cd06232 62 ---------------AEALAA--------------RPGA-HFALIPLENPDGYALHERLRAEHPRHMHHAARYTALGDDL 111 (240)
T ss_pred ---------------HHHHhc--------------cCCc-eEEEEEeeCCcHHHhhchhhccCcccccchhhhcccCCCc
Confidence 344432 0222 34567999999998751 11 12444667776
Q ss_pred C-CCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceee
Q psy7679 186 N-RNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLH 232 (608)
Q Consensus 186 N-RNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h 232 (608)
| |.++. + .|+.++++++.......-+++|
T Consensus 112 ~fr~~~~----------------~--~Es~~~~~~~~~~~~~~hiDlH 141 (240)
T cd06232 112 EYREFPP----------------F--GEREARHQALAKSGAQLHVNLH 141 (240)
T ss_pred ccccCCc----------------c--hHHHHHHHHHHhhCCcEEEECC
Confidence 6 54332 1 4577777877766666777777
No 101
>cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.83 E-value=2.9e-08 Score=102.84 Aligned_cols=214 Identities=15% Similarity=0.111 Sum_probs=117.0
Q ss_pred ceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC-CceeeceeeeeeeeeecCCCCCccC
Q psy7679 170 SLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGGAIVASYPFDDSKCL 248 (608)
Q Consensus 170 ~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~-~~l~~~~~h~g~ivp~~NpDG~~~~ 248 (608)
+.+++.|++||+|+. | ..++.++++.. +....-.+. ++|+.||.|+..
T Consensus 21 p~v~i~~giHGdE~~--------------G-------------~~~~~~l~~~l~~~~~~g~v~---~vp~~Np~a~~~- 69 (287)
T cd06251 21 PTLLLTAAIHGDELN--------------G-------------VEIIRRLLRQLDPKTLRGTVI---AVPVVNVFGFLN- 69 (287)
T ss_pred CEEEEEcCccCCchh--------------H-------------HHHHHHHHhcCCcccCceEEE---EEeCCCHHHHHh-
Confidence 679999999999999 6 44555555543 223344556 899999999754
Q ss_pred CCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEcccce-eeeecCCCCCCCCCCC
Q psy7679 249 GDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDI--PFVLSANLHGGSL-VANYPYDDNQAMKPQV 325 (608)
Q Consensus 249 ~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~--~~~~~~~~Hs~~~-~i~yP~~~~~~~~~~~ 325 (608)
..|.+..|.||||+||-.. ..++|.|.-..+++.. ..++.+|+|+++. .-..||....
T Consensus 70 ------~~R~~~d~~dlNR~fpg~~-------~g~~~~~~a~~i~~~~~~~~d~~iDlHs~~~~~~~~~~v~~~------ 130 (287)
T cd06251 70 ------QSRYLPDRRDLNRSFPGSK-------NGSLASRIAHLFFTEILSHADYGIDLHTGAIGRTNLPQIRAD------ 130 (287)
T ss_pred ------ccccCCCccCHhhcCCCCC-------CCCHHHHHHHHHHHHHHhhCCEEEEcCCCCCCCCccceEEEc------
Confidence 2366668999999998542 1223333222333322 2789999999973 3345655421
Q ss_pred CCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCCCCC
Q psy7679 326 DSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPA 405 (608)
Q Consensus 326 ~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~P~~ 405 (608)
..+ .....||+. .+.-+. +. -...++..+......++.++|+|+|....-..
T Consensus 131 ---~~~-~~~~~la~~----~g~~~i---l~-----------------~~~~~g~l~~~~~~~g~~aitvE~G~~~~~~~ 182 (287)
T cd06251 131 ---LDN-PEVLELARA----FGAPVI---LN-----------------SPGRDGSLRAAAVDAGIPSITYEAGEALRFDE 182 (287)
T ss_pred ---CCC-HHHHHHHHh----cCCCEE---Ee-----------------eCCCCchHHHHHHHcCCcEEEEeCCCCcccCH
Confidence 122 234455543 221100 00 00112334444566899999999998532222
Q ss_pred CCcchHHHhhhhhhhhhHHHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCce
Q psy7679 406 KDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGN 472 (608)
Q Consensus 406 ~~l~~~w~~N~~alls~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~ 472 (608)
...+.-+..++.++.... .|.|. . .+ +...+.+........+...|.|.....+|.
T Consensus 183 ----~~~~~~~~gi~~~L~~~g-~l~~~----~-~~-~~~~~~~~~~~~~v~A~~~G~~~~~~~~Gd 238 (287)
T cd06251 183 ----DAIRAGVRGILNVLRHLG-MLDGR----R-TP-KESEPVIARSSVWVRAPQGGLLRSLVKLGD 238 (287)
T ss_pred ----HHHHHHHHHHHHHHHHCC-CccCC----C-CC-CCCceEEecCCeEEecCCCeEEEEecCCCC
Confidence 222333455566654311 12221 1 11 113344444434566778888865544544
No 102
>cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.64 E-value=8.1e-07 Score=93.35 Aligned_cols=224 Identities=15% Similarity=0.136 Sum_probs=118.4
Q ss_pred cceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC-CceeeceeeeeeeeeecCCCCCcc
Q psy7679 169 NSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGGAIVASYPFDDSKC 247 (608)
Q Consensus 169 ~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~-~~l~~~~~h~g~ivp~~NpDG~~~ 247 (608)
.+++++.|++||+|.. | ..++.+++... +....-.+. ++|+.||-|...
T Consensus 34 gp~v~I~aGiHGdE~~--------------G-------------~~~~~~L~~~l~~~~l~G~vi---~vP~~Np~a~~~ 83 (316)
T cd06252 34 GPTVLLTGGNHGDEYE--------------G-------------QIALLRLARRLDPEEVRGRVI---ILPALNFPAVQA 83 (316)
T ss_pred CCEEEEEccCCCCchH--------------H-------------HHHHHHHHHhCChhhCeEEEE---EEeCCCHHHHHh
Confidence 4679999999999999 6 44455555443 223344666 889999999653
Q ss_pred CCCCCCCCCCCcc-cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CcEEEEEEcccceee-eecCCCCCCCC
Q psy7679 248 LGDRSSMIGRKNA-HDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDI---PFVLSANLHGGSLVA-NYPYDDNQAMK 322 (608)
Q Consensus 248 ~~~~~~~~~R~n~-~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~---~~~~~~~~Hs~~~~i-~yP~~~~~~~~ 322 (608)
..|.+. .|.||||.||-.. ..+.| +.++.++.+. ..++.+|+|+++... ++|+.....
T Consensus 84 -------~~R~~p~D~~DLNR~Fpg~~-------~gs~~-~riA~~i~~~l~~~aD~~iDLHt~~~~~~~~p~~~~~~-- 146 (316)
T cd06252 84 -------GTRTSPIDGGNLNRVFPGDP-------DGTVT-EMIAHYLTTELLPRADYVIDLHSGGRSLDFLPFALMHR-- 146 (316)
T ss_pred -------ccccCCCCCCcHHhhCCCCC-------CCCHH-HHHHHHHHHhhhhcCcEEEEccCCCCccccCCeEEeec--
Confidence 235543 6899999998542 22233 4444444432 468999999986544 446653210
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCC
Q psy7679 323 PQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKF 402 (608)
Q Consensus 323 ~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~ 402 (608)
....+..+....||+. .+.-. -+.. .. . ..+++.+..-...++.++|+|+|+...
T Consensus 147 ---~~~~~~~~~~~~la~~----~~~~~---il~~------~~--------~-~~~g~~~~~a~~~G~~~itiE~G~~~~ 201 (316)
T cd06252 147 ---LPDPEQEARCLAAARA----FGAPY---TLLM------RE--------I-DEAGTFDAAAERLGKTFVSTELGGGGT 201 (316)
T ss_pred ---cCChhhhHHHHHHHHH----hCCCE---EEEe------cC--------C-CCcccHHHHHHHCCCcEEEEeCCCCCc
Confidence 0111112334444443 22100 0000 00 0 112333333455789999999998432
Q ss_pred CCCCCcchHHHhhhhhhhhhHHHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCce
Q psy7679 403 PPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGN 472 (608)
Q Consensus 403 P~~~~l~~~w~~N~~alls~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~ 472 (608)
-.. ...+.-+..++.++.... .|.|.. ...|-....+.+.....-..++..|-|.....+|.
T Consensus 202 ~~~----~~~~~~~~gi~~~L~~lg-~l~~~~---~~~~~~~~~~~~~~~~~~v~A~~~G~~~~~~~~G~ 263 (316)
T cd06252 202 VTP----DAVAIAERGVRNVLIHLG-ILDGDP---DAPPEATRALDVPDARCYVFAPHPGLFEPLVDLGD 263 (316)
T ss_pred cCH----HHHHHHHHHHHHHHHHcC-CccCCC---CCCCCCcceEEecCCcEEEEcCCCeEEEEecCCCC
Confidence 221 223334556666664321 233331 11111112223323334567788888876665665
No 103
>TIGR02994 ectoine_eutE ectoine utilization protein EutE. Members of this family, part of the succinylglutamate desuccinylase / aspartoacylase family (pfam04952), belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it the operon is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida.
Probab=98.60 E-value=7.5e-07 Score=93.60 Aligned_cols=222 Identities=15% Similarity=0.173 Sum_probs=122.2
Q ss_pred cceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC-CceeeceeeeeeeeeecCCCCCcc
Q psy7679 169 NSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGGAIVASYPFDDSKC 247 (608)
Q Consensus 169 ~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~-~~l~~~~~h~g~ivp~~NpDG~~~ 247 (608)
.+++++.++.||+|+. |. .++..+++.. +...+=.+. +||++||-|...
T Consensus 47 gp~v~i~agvHGdE~~--------------G~-------------~~~~~L~~~l~~~~l~G~v~---~vP~~N~~g~~~ 96 (325)
T TIGR02994 47 GPTALLTGGNHGDEYE--------------GP-------------IALFELARTLDAEDVSGRII---IVPAMNYPAFRA 96 (325)
T ss_pred CCEEEEEeccCCCchH--------------HH-------------HHHHHHHhhCChhhCcEEEE---EEcCCCHHHHHh
Confidence 4789999999999999 63 3333443332 223455566 899999988543
Q ss_pred CCCCCCCCCCCc-ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CcEEEEEEccccee-eeecCCCCCCCC
Q psy7679 248 LGDRSSMIGRKN-AHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDI---PFVLSANLHGGSLV-ANYPYDDNQAMK 322 (608)
Q Consensus 248 ~~~~~~~~~R~n-~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~---~~~~~~~~Hs~~~~-i~yP~~~~~~~~ 322 (608)
..|.+ ..|.||||.||-. +-.+. |+.++.++.+. ..++++|+|+++.. -++||.....
T Consensus 97 -------~~r~~p~d~~nlNR~fPG~-------~~gs~-~~riA~~l~~~l~~~aD~~iDlHs~~~~~~~~P~v~~~~-- 159 (325)
T TIGR02994 97 -------GTRTSPIDRGNLNRSFPGR-------PDGTV-TEKIADYFQRHLLPLADIVLDFHSGGKTLDFVPFAAAHI-- 159 (325)
T ss_pred -------hCCCCCCCCCccCCCCCCC-------CCCCH-HHHHHHHHHHhHHhhCCEEEECCCCCccccccceEEEec--
Confidence 12433 3688999999842 33333 66666666433 47899999998863 3456553210
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCCCC
Q psy7679 323 PQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKF 402 (608)
Q Consensus 323 ~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~ 402 (608)
+.....++..+.||+. .+.-+. +. ......|++.|++-...|+.++++|+|+...
T Consensus 160 ---~~~~~~~~~~~~lA~~----fg~p~~---~~---------------~~~~~~~gs~~~a~~~~Gip~i~~E~Gg~~~ 214 (325)
T TIGR02994 160 ---LPDKAQEAKCFDAVAA----FAAPYS---MK---------------MLEIDSVGMYDTAAEEMGKVFVTTELGGGGT 214 (325)
T ss_pred ---CCcchhhHHHHHHHHh----cCCCeE---EE---------------eccCCCCccHHHHHHHCCCeEEEEeCCCCCc
Confidence 1111122233444443 221100 00 0011235677777778999999999998643
Q ss_pred CCCCCcchHHHhhhhhhhhhHHHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCce
Q psy7679 403 PPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGN 472 (608)
Q Consensus 403 P~~~~l~~~w~~N~~alls~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~ 472 (608)
-..+. .+.-...++.++.... .|.|.+. +.+-..+.+.....-..+...|-|.....+|.
T Consensus 215 ~~~~~----~~~~~~gi~~vL~~lg-ml~~~~~-----~~~~~~~~~~~~~~~v~Ap~~Gi~~~~v~~G~ 274 (325)
T TIGR02994 215 ASART----IKIAKRGVRNVLRHAG-ILKGELE-----IAPTIWLDMPSDDCFIFAEDDGLIEFMIDLGD 274 (325)
T ss_pred CCHHH----HHHHHHHHHHHHHHcC-CcCCCCC-----CCCccceecCCCCeEEEcCCCeEEEEecCCCC
Confidence 33222 2233556777765421 2333221 11111222222222456788888866555554
No 104
>PF10994 DUF2817: Protein of unknown function (DUF2817); InterPro: IPR021259 This family of proteins has no known function.
Probab=98.60 E-value=1.5e-06 Score=91.29 Aligned_cols=216 Identities=18% Similarity=0.166 Sum_probs=125.0
Q ss_pred CHHHHHHHHHHHHHhCCC-ceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccc
Q psy7679 123 NYTQMQAELEHITKNYPN-LTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERRE 201 (608)
Q Consensus 123 ~~~~i~~~L~~l~~~~p~-~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~ 201 (608)
+|.+..+-..+.++.-.. +.+.....+-.+|.++..=+....|...+..+.+.++.||-|=- .|
T Consensus 4 sY~~AR~~Fl~aA~~~ga~~~~~~~p~~G~~ge~L~~Dva~lg~~~a~~lLv~~SGtHGVEGf-------------~G-- 68 (341)
T PF10994_consen 4 SYAEARERFLAAAEAAGAKLESYPHPLRGPDGEDLATDVAWLGPKDASRLLVLTSGTHGVEGF-------------AG-- 68 (341)
T ss_pred cHHHHHHHHHHHHHHcCCcceeeeCCCCCCCCCcceeEEEEecCCCCCeEEEEEecCCccccc-------------cc--
Confidence 566666555555554433 22221111223444333222222333333456778899987533 02
Q ss_pred cCCCCCCchHHHHHHHHHHhcC---CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCC-
Q psy7679 202 QPLNVKKLEPETLAMISFIKNN---PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSK- 277 (608)
Q Consensus 202 ~~G~~p~sePEt~al~~~l~~~---~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~- 277 (608)
.-.-+.||++. .+...+.+. +|-.+||=|.++ ..|.|.++|||||||-..-.+.+
T Consensus 69 -----------SaiQ~~~L~~~~~~~~~~~~avl---lVHAlNPyGfa~-------~RR~nE~NVDLNRNfldf~~~~p~ 127 (341)
T PF10994_consen 69 -----------SAIQIALLREDLARSLPAGVAVL---LVHALNPYGFAW-------LRRVNENNVDLNRNFLDFSQPLPA 127 (341)
T ss_pred -----------HHHHHHHHHcccccccCCCCeEE---EEEccCccccce-------eeccCCcCcCcccccCcccCCCCC
Confidence 22234455542 466678888 999999999886 46889999999999973222100
Q ss_pred ----------------------------------------------------C-----CCCCcHHHHHHHHHHHhC----
Q psy7679 278 ----------------------------------------------------Y-----NSVPEPETLAVEKWLQDI---- 296 (608)
Q Consensus 278 ----------------------------------------------------~-----~~~sepEt~ai~~~~~~~---- 296 (608)
+ ---.++-.+.++++++++
T Consensus 128 N~~Y~~l~~~l~p~~~~~~~~~~~~~~l~~~~~~~G~~a~~~av~~GQY~~P~GlfYGG~~p~wS~~~L~~il~~~~~~~ 207 (341)
T PF10994_consen 128 NPGYEELHPLLNPSDWPPPADAAAFAALAKYIARHGFAAFKQAVSGGQYTHPDGLFYGGTEPEWSNRTLREILREHLAGA 207 (341)
T ss_pred CccHHHHHHhhCCCCCCchhhHHHHHHHHHHHHHHhHHHHHHHHhCcCcCCCCccccCCCCccHHHHHHHHHHHHHhhcC
Confidence 0 223456677777887777
Q ss_pred CcEEEEEEcccceeeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeec
Q psy7679 297 PFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVV 376 (608)
Q Consensus 297 ~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~ 376 (608)
.-+++||+|++-+ ||++..- .....+|...++...+.+......... +.. .-|+.
T Consensus 208 ~~v~~iDlHTGlG----p~G~~~~----i~~~~~~~~~~~~a~~~~g~~v~~~~~-------------g~~----~s~~~ 262 (341)
T PF10994_consen 208 ERVAWIDLHTGLG----PYGHGEL----ICDGPPDSAALERARRWWGPDVTSPYD-------------GTS----VSYDI 262 (341)
T ss_pred cEEEEEEeCCCCC----CCCceEE----EecCCCChHHHHHHHHHhCcceeeccC-------------CCC----ccccc
Confidence 3679999999987 7776421 122345555555555443322111111 111 23788
Q ss_pred cCcccchhhhc---cCeEEEEEeecC
Q psy7679 377 SGGMQDYNYIH---ANTLEITLELGC 399 (608)
Q Consensus 377 ~G~~~Dw~y~~---~~~~~~t~El~~ 399 (608)
.|.+.++.+.. .....+++|.|.
T Consensus 263 ~G~~~~~~~~~~~~~~~~~~~~EfGT 288 (341)
T PF10994_consen 263 TGLLIDAWAELLPDAEYTPITLEFGT 288 (341)
T ss_pred CCcHHHHHHHHcCCCceeEEEEEeCC
Confidence 89999999853 347889999987
No 105
>cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.60 E-value=5.1e-07 Score=93.81 Aligned_cols=224 Identities=16% Similarity=0.170 Sum_probs=117.9
Q ss_pred ceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC-CceeeceeeeeeeeeecCCCCCccC
Q psy7679 170 SLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGGAIVASYPFDDSKCL 248 (608)
Q Consensus 170 ~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~-~~l~~~~~h~g~ivp~~NpDG~~~~ 248 (608)
+.+++.+++||+|.. | +.++.+++... +....-.+. ++|+.||.|+..
T Consensus 25 p~v~i~agvHG~E~~--------------G-------------~~~~~~l~~~l~~~~~~g~~~---~vp~~N~~a~~~- 73 (293)
T cd06255 25 PTLWLHAQVHGNEYN--------------G-------------TQAIVDLYRSLDPAALKGRLV---ALPTANPTALDA- 73 (293)
T ss_pred CEEEEEcccCCCcHH--------------H-------------HHHHHHHHHhCCHhhcCCeEE---EEeCcCHHHHHh-
Confidence 679999999999998 6 45555565543 122334555 789999999764
Q ss_pred CCCCCCCCCCcc-cccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCCCCCCCCCCCCC
Q psy7679 249 GDRSSMIGRKNA-HDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYDDNQAMKPQVDS 327 (608)
Q Consensus 249 ~~~~~~~~R~n~-~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~~~~~~ 327 (608)
..|.+. .+.||||.||-. + +...+|..++++.+-+. ...++.+|+|+++..- .|+..... .
T Consensus 74 ------~~R~~p~d~~dlNR~fpg~--~--~g~~~~r~A~~~~~~~~-~~~d~~iDlHs~~~~~-~~~~v~~~------~ 135 (293)
T cd06255 74 ------RTRMSPFDELDLNRTFPGN--P--NGMVTQQMAHALFEEVR-GVADYLVDLHTMTTIS-KRYTVYKV------Y 135 (293)
T ss_pred ------hcccCCCCCCCcccCCCCC--C--CCCHHHHHHHHHHHHHH-hcCCEEEECCCCCCCC-CCCeEEec------C
Confidence 236665 899999999842 0 01223333334333222 2458999999997753 33321100 0
Q ss_pred CCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccC-eEEEEEeecCCCCCCCC
Q psy7679 328 PTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHAN-TLEITLELGCYKFPPAK 406 (608)
Q Consensus 328 ~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~-~~~~t~El~~~~~P~~~ 406 (608)
.....+....||+.+.-. + +.. . .+.... ...|+....+ ...+ +.++|+|+|....-..+
T Consensus 136 ~~~~~~~~~~lA~~fg~~---~-----~~~--~----~~~~~~----~~~g~~~~~a-~~~g~ipait~E~G~~~~~d~~ 196 (293)
T cd06255 136 PGVTEENLERMTRAFGSK---L-----YRP--D----VGGKGE----LLPGNIAGVL-DYQCLVPAFMVELGGGGPYQPE 196 (293)
T ss_pred CccccHHHHHHHHHcCCC---E-----Eee--c----cCCCCC----cCCccHHHHH-HHCCCCcEEEEeCCCCccCCHH
Confidence 011223344555543211 0 000 0 000000 0023333333 4456 89999999986443322
Q ss_pred CcchHHHhhhhhhhhhHHHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCceE
Q psy7679 407 DLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNY 473 (608)
Q Consensus 407 ~l~~~w~~N~~alls~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y 473 (608)
..+.-..+++.++.. ...|.|.+. ...|.+ ..+ + ..-..+...|-|.....+|.+
T Consensus 197 ----~~~~~~~GI~~vL~~-lgml~~~~~--~~~~~~---~~~-~-~~~v~Ap~~Gi~~~~~~~G~~ 251 (293)
T cd06255 197 ----NVERAATGLRNMLRH-LGILDGEVE--DHAPAP---AFV-S-RDWVAAIHGGLFEPSVPAGDT 251 (293)
T ss_pred ----HHHHHHHHHHHHHHH-CCCccCCCc--cCCCCC---eee-e-eEEEecCCCeEEEEecCCCCE
Confidence 223345677777743 113455431 111211 111 1 334667888888776666764
No 106
>cd06230 M14_ASTE_ASPA_like The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.57 E-value=2.1e-07 Score=94.73 Aligned_cols=101 Identities=20% Similarity=0.124 Sum_probs=67.5
Q ss_pred eEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCc--eeeceeeeeeeeeecCCCCCccCC
Q psy7679 172 ARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPF--VLSGNLHGGAIVASYPFDDSKCLG 249 (608)
Q Consensus 172 ~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~--l~~~~~h~g~ivp~~NpDG~~~~~ 249 (608)
+++.|++||+|.. |. .++..++..... ..+.++. ++|+.||+|+..
T Consensus 1 v~i~agiHG~E~~--------------g~-------------~~~~~l~~~~~~~~~l~g~v~---~vp~~N~~g~~~-- 48 (252)
T cd06230 1 VAVVGGVHGNEPC--------------GV-------------QAIRRLLAELDEGQALRGPVK---LVPAANPLALEA-- 48 (252)
T ss_pred CEEEcccCCCcHH--------------HH-------------HHHHHHHHHHhhhcccccEEE---EEeCcCHHHHHh--
Confidence 4678999999999 73 444444443321 4567788 999999999753
Q ss_pred CCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCC--cEEEEEEcccceeeeecCCCC
Q psy7679 250 DRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDIP--FVLSANLHGGSLVANYPYDDN 318 (608)
Q Consensus 250 ~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~~--~~~~~~~Hs~~~~i~yP~~~~ 318 (608)
..|.+. .||||+||-.-.. ..+|.|....+.+... .++.+|+|++.. ...|+...
T Consensus 49 -----~~R~~~--~DLNR~fpg~~~~------~~~~~~~a~~l~~~i~~~~d~~iDlH~~~~-~~~~~~~~ 105 (252)
T cd06230 49 -----GQRYLD--RDLNRIFPGDPDS------GTYEDRLAAELCPELEGLADAVLDLHSTSS-EGPPFILV 105 (252)
T ss_pred -----CCCCCC--cCCCCCCCCCCCC------CCHHHHHHHHHHHHHhhhccEEEECCCCCC-CCCCEEEE
Confidence 235554 9999999853220 3455555444444443 589999999988 56676543
No 107
>cd06253 M14_ASTE_ASPA_like_3 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.52 E-value=6.6e-07 Score=93.11 Aligned_cols=222 Identities=17% Similarity=0.129 Sum_probs=120.2
Q ss_pred cceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCC----ceeeceeeeeeeeeecCCCC
Q psy7679 169 NSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNP----FVLSGNLHGGAIVASYPFDD 244 (608)
Q Consensus 169 ~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~----~l~~~~~h~g~ivp~~NpDG 244 (608)
.+.+++.+++||+|+. |... ...+++.+...+ ....-.+. ++|++||-|
T Consensus 19 gp~v~i~agvHGdE~~--------------G~~~----------~~~L~~~l~~~~~~~~~~l~g~v~---~vP~~N~~a 71 (298)
T cd06253 19 EKRICIVGGIHGDELQ--------------GLYI----------CSLLIRFLKELEKRGPLKLNGIVD---VIPSVNPLG 71 (298)
T ss_pred CcEEEEEccCccchHH--------------HHHH----------HHHHHHHHhhhhcccccccCceEE---EEeCcCHHH
Confidence 5679999999999999 7443 445555555432 34577888 999999999
Q ss_pred CccCCCCCCCCCCCc-ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh--CCcEEEEEEcccceee-eecCCCCCC
Q psy7679 245 SKCLGDRSSMIGRKN-AHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQD--IPFVLSANLHGGSLVA-NYPYDDNQA 320 (608)
Q Consensus 245 ~~~~~~~~~~~~R~n-~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~--~~~~~~~~~Hs~~~~i-~yP~~~~~~ 320 (608)
... ..|.. ..|.||||.||-. +..++ ++.++..+.+ ...++.+|+|+++.-. .+|+-..
T Consensus 72 ~~~-------~~R~~p~d~~dlNR~Fpg~-------~~g~~-~~riA~~~~~~~~~~d~~iDLHsg~~~~~~~p~v~~-- 134 (298)
T cd06253 72 LNL-------GTRFWPTDNSDINRMFPGD-------PQGET-TQRIAAAVFEDVKGADYCIDLHSSNIFLEEIPQVRL-- 134 (298)
T ss_pred HHH-------hhCcCCCCCCcccccCCCC-------CCCcH-HHHHHHHHHHHhcCCCEEEEccCCCcccccCCeEEE--
Confidence 653 23543 4789999999853 11122 3333333333 2367999999975432 2454321
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeecCC
Q psy7679 321 MKPQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCY 400 (608)
Q Consensus 321 ~~~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~ 400 (608)
.....+....+|+.+...+-.... .+.. ..|+ ..+.....++.++|+|+|..
T Consensus 135 -------~~~~~~~~~~lA~~fg~~~i~~~~-------------~~~~-------~~g~-~~~~~~~~g~paitvE~G~~ 186 (298)
T cd06253 135 -------YKTGSESLLPLAKFLNLDVIWIHP-------------SSTV-------DEAT-LAHNLQVWGTPAFSVEMGVG 186 (298)
T ss_pred -------cCCCCHHHHHHHHHhCCCEEEecC-------------CCCc-------chhh-HHHHHHHhCCeEEEEEcCCC
Confidence 111223344555543211000000 0000 0133 23444578999999999985
Q ss_pred CCCCCCCcchHHHhhhhhhhhhHHHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCce
Q psy7679 401 KFPPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGN 472 (608)
Q Consensus 401 ~~P~~~~l~~~w~~N~~alls~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~ 472 (608)
..-.. ...+.-...++.++... ..|.|.+. .+.+.. +..........+...|-|.....+|.
T Consensus 187 ~~~~~----~~~~~~~~gi~~~L~~~-g~l~g~~~----~~~~~~-~~~~~~~~~v~A~~~Gl~~~~~~~G~ 248 (298)
T cd06253 187 MRIDK----EYANQIVSGILRFMTKM-GILKGNVH----NGYRST-IAEERDVVYVNAETSGIFVPAKHLGD 248 (298)
T ss_pred cccCH----HHHHHHHHHHHHHHHHC-cCccCCCC----CCCCCc-eeecCceEEEEcCCCeEEEECcCCCC
Confidence 33222 12223345666666431 12444321 111111 22222234567788898876666665
No 108
>PF04952 AstE_AspA: Succinylglutamate desuccinylase / Aspartoacylase family; InterPro: IPR007036 This family describes both succinylglutamate desuccinylase that catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway and also includes aspartoacylase 3.5.1.15 from EC which cleaves acylaspartate into a fatty acid and aspartate. Mutations in P45381 from SWISSPROT lead to Canavan disease [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0008152 metabolic process; PDB: 3CDX_A 3FMC_A 3NA6_A 2BCO_B 3B2Y_A 3LWU_A 3IEH_A 2QVP_B 2G9D_A 1YW4_A ....
Probab=98.47 E-value=1.7e-07 Score=97.43 Aligned_cols=226 Identities=19% Similarity=0.103 Sum_probs=118.4
Q ss_pred ceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC-CceeeceeeeeeeeeecCCCCCccC
Q psy7679 170 SLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN-PFVLSGNLHGGAIVASYPFDDSKCL 248 (608)
Q Consensus 170 ~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~-~~l~~~~~h~g~ivp~~NpDG~~~~ 248 (608)
+++++.+++||+|+. | ..++.+++++. +....-.+. ++|+.||.|+...
T Consensus 3 p~l~i~agvHGnE~~--------------G-------------~~a~~~L~~~l~~~~~~G~~~---~vp~~N~~a~~~~ 52 (292)
T PF04952_consen 3 PTLLITAGVHGNEYN--------------G-------------IEALQRLLRELDPADLSGTVI---IVPVANPPAFRQG 52 (292)
T ss_dssp -EEEEEE-SSTTBCH--------------H-------------HHHHHHHHHHHHGGGCTCEEE---EEEESSHHHHHHT
T ss_pred CEEEEEcCcccChHH--------------H-------------HHHHHHHHhcchhcccCCceE---EEEEeCHHHHHhc
Confidence 457889999999999 7 44455555443 122444455 8999999996531
Q ss_pred CCCCCCCCCCc-ccccCCCCCCCCCCCCCC-CCCCCcHHHHHHHHHHHhC---CcEEEEEEcccceee-eecCCCCCCCC
Q psy7679 249 GDRSSMIGRKN-AHDVDLNRNFPGQFGPSK-YNSVPEPETLAVEKWLQDI---PFVLSANLHGGSLVA-NYPYDDNQAMK 322 (608)
Q Consensus 249 ~~~~~~~~R~n-~~GvDLNRnf~~~w~~~~-~~~~sepEt~ai~~~~~~~---~~~~~~~~Hs~~~~i-~yP~~~~~~~~ 322 (608)
.|.. ..|.||||.||-...... ......-+++.++..+.+. ..++.+|+|+++... .+|+....
T Consensus 53 -------~R~~~~d~~dLNR~Fpg~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~aD~~iDLHs~~~~~~~~~~~~~~--- 122 (292)
T PF04952_consen 53 -------TRFVPIDGRDLNRCFPGDALGSSLQEDYEATETERIAHALFEEILPDADYVIDLHSGSSSSDHPPFVRYP--- 122 (292)
T ss_dssp -------SSSSTTTSSBGGGSTTHHHHCHCTTHHHHHHHHHHHHHHHHHTTCCCGSEEEEEEEESSTBEEEEEEEEE---
T ss_pred -------cccCCCCCCCHHHhCCCCccccccccccchhHHHHHHHHHhhhhhccceEEEEeccCCCCCccceEEEec---
Confidence 2444 479999999984211100 0011125677777777655 367999999987654 33443221
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCCCCCCCccccccee--e-eccCcccchhhhccCeEEEEEeecC
Q psy7679 323 PQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQW--Y-VVSGGMQDYNYIHANTLEITLELGC 399 (608)
Q Consensus 323 ~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~--Y-~~~G~~~Dw~y~~~~~~~~t~El~~ 399 (608)
...+......+|+. .+.- ..+ . ...+++..+.....++.++|+|+|.
T Consensus 123 -----~~~~~~~~~~~a~~----~~~~---------------------~~~~~~~~~~~~~~~~~~~~~g~~a~tvE~G~ 172 (292)
T PF04952_consen 123 -----ENDDEAQLLALARA----FGAP---------------------AVLILDEDGTGGTLRSAANRAGIPAVTVELGG 172 (292)
T ss_dssp -----CGSSHHHHHHHHHH----HTTS---------------------EEEEEESSHCSSHHHHHHHHCSSEEEEEEEEE
T ss_pred -----ccchhhHhhhhHHH----cCCC---------------------eEEEEeeCCCccchhHHHHhcCCeEEEEEeCC
Confidence 12233323344433 2110 001 0 1123455566677899999999998
Q ss_pred CCCCCCCCcchHHHhhhhhhhhhHHHhhcceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCc
Q psy7679 400 YKFPPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPG 471 (608)
Q Consensus 400 ~~~P~~~~l~~~w~~N~~alls~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g 471 (608)
...-. +...+.-...++.++.... .+.|.+.. ...+...-.+..........++..|.|...+.+|
T Consensus 173 ~~~~~----~~~~~~~~~~i~~~L~~~g-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~G~~~~~~~~g 238 (292)
T PF04952_consen 173 GGDFD----EEAVEQAVDGILNVLRHLG-MLDGEAET-PEPPEPYRHLFELDDPEWVRAPAGGLFEPEVKLG 238 (292)
T ss_dssp TTTTT----HHHHHHHHHHHHHHHHHHT-SCCST-SC-SEEEEEEEEEEEEEGCCEEESSSSEEEEETSSTT
T ss_pred CCCCC----HHHHHHHHHHHHHHHHHhc-CcCCCcCC-ccccccccceEEeecceeecCCccEEEEEeecCC
Confidence 52211 1222334456666665432 23333220 0001111111111222345678889887655443
No 109
>KOG3641|consensus
Probab=98.26 E-value=2e-06 Score=92.55 Aligned_cols=158 Identities=18% Similarity=0.168 Sum_probs=113.5
Q ss_pred CCHHHHHHHHHHHHHhCC-C-ceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcc
Q psy7679 122 HNYTQMQAELEHITKNYP-N-LTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSER 199 (608)
Q Consensus 122 ~~~~~i~~~L~~l~~~~p-~-~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~ 199 (608)
++|..++-+|+.|++..+ + ..+...++.++.||.+-++.+..---+..+.+++.++.|..|.. .
T Consensus 380 yTy~~l~~hLn~les~~~~~~yfr~dVl~~tl~g~~~~l~tI~~ae~~~~~~IfLSaRVHpgeTn--------------s 445 (650)
T KOG3641|consen 380 YTYSQLQCHLNGLESPKNPAFYFRYDVLLFTLVGRAMALATIDMAECAPRPVIFLSARVHPGETN--------------S 445 (650)
T ss_pred ccHHHHHhhhhcccCCCCcCcccchheeeeeecCCccceEEeeHhhcCCcceEEEecccCCCCCc--------------H
Confidence 588999999999976543 3 24666788889999998888874333445668999999998887 4
Q ss_pred cccCCCCCCchHHHHHHHHHHhcC-----CceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCC
Q psy7679 200 REQPLNVKKLEPETLAMISFIKNN-----PFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFG 274 (608)
Q Consensus 200 ~~~~G~~p~sePEt~al~~~l~~~-----~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~ 274 (608)
... ++.+++++.+. -+-...-+- |+||+||||.... .-|-.-.|.||||-|...
T Consensus 446 Swv----------mkGilefl~s~~p~aq~LRe~~vFK---I~PMLNPDGV~~G------nyRCSL~G~DLNR~w~tp-- 504 (650)
T KOG3641|consen 446 SWV----------MKGILEFLVSNSPLAQGLRESYVFK---IVPMLNPDGVIVG------NYRCSLMGLDLNRMWSTP-- 504 (650)
T ss_pred HHH----------HHHHHHHhhcCCcHHHhhhhheeEe---cccccCCCceecc------cceeccccchhhhhcCCC--
Confidence 333 56677776655 244556666 9999999996532 126677899999988432
Q ss_pred CCCCCCCCcHHHHHHHHHHHhC------CcEEEEEEcccceeeee-cCCCC
Q psy7679 275 PSKYNSVPEPETLAVEKWLQDI------PFVLSANLHGGSLVANY-PYDDN 318 (608)
Q Consensus 275 ~~~~~~~sepEt~ai~~~~~~~------~~~~~~~~Hs~~~~i~y-P~~~~ 318 (608)
.+.+-|+..+...++... .+.+++++|+-++.+.+ =||..
T Consensus 505 ----s~~shPsi~~~k~li~~l~~~~~~~p~~Y~DlHgHSqK~n~FvYGnv 551 (650)
T KOG3641|consen 505 ----SPASHPSIYAVKQLIQQLSNVPHSRPLGYVDLHGHSQKVNHFVYGNV 551 (650)
T ss_pred ----CcccchhHHhHHHHHhhhhcccccCceEeecccccccccceEEecCc
Confidence 455788888887777665 26789999999987643 34443
No 110
>COG2866 Predicted carboxypeptidase [Amino acid transport and metabolism]
Probab=98.14 E-value=3.2e-06 Score=90.28 Aligned_cols=97 Identities=27% Similarity=0.305 Sum_probs=68.6
Q ss_pred ceeeeeccccccCe-EEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHH-
Q psy7679 141 LTRLYSVGQSVEKR-ELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMIS- 218 (608)
Q Consensus 141 ~~~l~~ig~s~~gr-~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~- 218 (608)
++++..+|+|++|| +.++..+..|+. .+++++.++.|+|+.. ..+. -+..++.
T Consensus 120 ~~~~~~~g~sv~GR~~~~i~~~~~~~~--~~~i~~~~~~H~~g~~--------------~~~~---------~~~~li~r 174 (374)
T COG2866 120 LVELELIGRSVEGRDDPLITFPESNPE--HKTILITAGQHARGEK--------------MVEW---------FLYNLILR 174 (374)
T ss_pred cceeeecCccccccccceeeecCCCCc--cceeeEecccccCccH--------------HHHH---------HHHHHHHH
Confidence 45678899999999 777766666553 5679999999996333 1111 0222222
Q ss_pred HHhc----CCceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCC
Q psy7679 219 FIKN----NPFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPG 271 (608)
Q Consensus 219 ~l~~----~~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~ 271 (608)
++.. ..+++..++| ++|.+||||+... ..|.|+.|+||||+|+.
T Consensus 175 ~~~~~~~~~~lld~~~~~---vvp~~NpDG~~~~------~lr~na~~~dLnr~~~~ 222 (374)
T COG2866 175 YLDPDVQVRKLLDRADLH---VVPNVNPDGSDLG------NLRTNANGVDLNRNFIA 222 (374)
T ss_pred hcCccchhhhhhccccEE---EecccCCchhhhc------ccccccCccchhhhccC
Confidence 2222 2488999999 9999999997632 23999999999999963
No 111
>COG2866 Predicted carboxypeptidase [Amino acid transport and metabolism]
Probab=97.96 E-value=7.6e-06 Score=87.43 Aligned_cols=201 Identities=17% Similarity=0.095 Sum_probs=109.1
Q ss_pred ceEEEEcccccCCc-eeEEEecCCC-Ccceeeeec--cceEEEecCCCCccccccccccccccccccccCCCHHHHHHHH
Q psy7679 56 KVKLHSIGKSVQNR-DLWALQGGGT-NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAEL 131 (608)
Q Consensus 56 ~~~~~~iG~S~eGR-~i~~l~Is~~-~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~~~~y~~~~~i~~~L 131 (608)
++++..+|+|++|| +++..+-+.+ .++.+++.+ |+| +... ...++
T Consensus 120 ~~~~~~~g~sv~GR~~~~i~~~~~~~~~~~i~~~~~~H~~---g~~~----------------------------~~~~~ 168 (374)
T COG2866 120 LVELELIGRSVEGRDDPLITFPESNPEHKTILITAGQHAR---GEKM----------------------------VEWFL 168 (374)
T ss_pred cceeeecCccccccccceeeecCCCCccceeeEecccccC---ccHH----------------------------HHHHH
Confidence 67889999999999 6666555443 456666665 665 1111 22233
Q ss_pred HHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchH
Q psy7679 132 EHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEP 211 (608)
Q Consensus 132 ~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~seP 211 (608)
..+...+-+- .....+..++..+.++|..||||.+.+.. +.++++++|||+|+..-... +.+
T Consensus 169 ~~li~r~~~~---~~~~~~lld~~~~~vvp~~NpDG~~~~~l---r~na~~~dLnr~~~~~~~~~--~~~---------- 230 (374)
T COG2866 169 YNLILRYLDP---DVQVRKLLDRADLHVVPNVNPDGSDLGNL---RTNANGVDLNRNFIAPNEEE--GKE---------- 230 (374)
T ss_pred HHHHHHhcCc---cchhhhhhccccEEEecccCCchhhhccc---ccccCccchhhhccCCCccc--chH----------
Confidence 3333333222 11223346666777889999999988744 88999999999996552211 111
Q ss_pred HHHHHHHHHhc-CCceee-ceeeeeee-eeecCCCCCc------cCCCCCC---CCCCCcccccCCCCCCCCCCCCCCCC
Q psy7679 212 ETLAMISFIKN-NPFVLS-GNLHGGAI-VASYPFDDSK------CLGDRSS---MIGRKNAHDVDLNRNFPGQFGPSKYN 279 (608)
Q Consensus 212 Et~al~~~l~~-~~~l~~-~~~h~g~i-vp~~NpDG~~------~~~~~~~---~~~R~n~~GvDLNRnf~~~w~~~~~~ 279 (608)
+....+...+ ...... ...|+-.. .|-.+-+|.. ... +.+ ..-+..|.+-++|+.| .
T Consensus 231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~~~~~y~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~ 299 (374)
T COG2866 231 -VYRWNDAALEFEDVVLFLFDIHPDEGLFPEISVAGCELIAGYTPET-QEQPFLFGEALACAEDPRNTEY---------G 299 (374)
T ss_pred -HHhhhhhhccccccccccccCCccccccccccccccccccccceee-cccchhhhheeeccccccchhh---------h
Confidence 1111111111 111111 12222111 3444334421 100 111 1123346666666666 3
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEEcccceeeeecCC
Q psy7679 280 SVPEPETLAVEKWLQDIPFVLSANLHGGSLVANYPYD 316 (608)
Q Consensus 280 ~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~~i~yP~~ 316 (608)
.+-.+|-++.+.....+....+.+.|.....+.+|++
T Consensus 300 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 336 (374)
T COG2866 300 EELSAEGRANLVLANGYEGNGFFGVRCADYTLEPPFK 336 (374)
T ss_pred cccCccchhHHHHhhhhcccccccccchhhccCCCcc
Confidence 4566667777777777777777788877766655544
No 112
>PRK02259 aspartoacylase; Provisional
Probab=97.96 E-value=6.7e-05 Score=77.82 Aligned_cols=98 Identities=17% Similarity=0.178 Sum_probs=61.4
Q ss_pred eeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCcee-eceeeeeeeeeecCCCCCccCC
Q psy7679 171 LARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVL-SGNLHGGAIVASYPFDDSKCLG 249 (608)
Q Consensus 171 ~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~-~~~~h~g~ivp~~NpDG~~~~~ 249 (608)
.+++.|++||+|.. | ..++.+|++...... .-... ++|+.||.++..
T Consensus 4 ~v~i~aGvHGnE~~--------------G-------------v~~v~~l~~~~~~~~~~g~~i---~~~i~Np~A~~~-- 51 (288)
T PRK02259 4 RVAIVGGTHGNEIT--------------G-------------IYLVKKWQQQPNLINRKGLEV---QTVIGNPEAIEA-- 51 (288)
T ss_pred EEEEEcCccCChhH--------------H-------------HHHHHHHHhcccccccCccEE---EEEeeCHHHHHh--
Confidence 47889999999999 6 455666666542222 11223 688999999653
Q ss_pred CCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC------CcEEEEEEcccce
Q psy7679 250 DRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDI------PFVLSANLHGGSL 309 (608)
Q Consensus 250 ~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~------~~~~~~~~Hs~~~ 309 (608)
..|.. ..||||.||-.....+ ..+..|.+.-..+.... +.++.+|+|+++.
T Consensus 52 -----~~Ry~--~~DLNR~Fpg~~~~~~--~~~~~e~~~A~~l~~~~~~~~~~~~D~~iDLHttts 108 (288)
T PRK02259 52 -----GRRYI--DRDLNRSFRLDLLQNP--DLSGYEQLRAKELVQQLGPKGNSPCDFIIDLHSTTA 108 (288)
T ss_pred -----CCCCC--cccCCCCCCCccccCC--CCCCHHHHHHHHHHHHHhhccCccCcEEEECCCCCC
Confidence 12432 3699999996543211 11345555545554443 5689999999753
No 113
>PF08400 phage_tail_N: Prophage tail fibre N-terminal; InterPro: IPR013609 This entry represents the N terminus of phage 933W tail fibre protein. The characteristics of the protein distribution suggest prophage matches.
Probab=97.92 E-value=3.7e-05 Score=69.36 Aligned_cols=64 Identities=23% Similarity=0.449 Sum_probs=54.1
Q ss_pred ceeeEEECCCCCcccCceEEEcCc----------eeeEEeCCCeeEEEecCCceEEEEEEecceeeEE-EEEEEe
Q psy7679 429 GVAGFVKGREGEGVAGASIAVEGL----------GHVVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAI-HQVSVE 492 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~g~----------~~~~~Td~~G~f~~~l~~g~y~l~~s~~GY~~~~-~~v~v~ 492 (608)
-|+|+.+|..|+|++|++|.++-. .-...|+.+|.|.+.+.||.|.|.+...|+.+.. =.|+|.
T Consensus 4 ~ISGvL~dg~G~pv~g~~I~L~A~~tS~~Vv~~t~as~~t~~~G~Ys~~~epG~Y~V~l~~~g~~~~~vG~I~V~ 78 (134)
T PF08400_consen 4 KISGVLKDGAGKPVPGCTITLKARRTSSTVVVGTVASVVTGEAGEYSFDVEPGVYRVTLKVEGRPPVYVGDITVY 78 (134)
T ss_pred EEEEEEeCCCCCcCCCCEEEEEEccCchheEEEEEEEEEcCCCceEEEEecCCeEEEEEEECCCCceeEEEEEEe
Confidence 489999999999999999999732 2245789999999999999999999999997665 346665
No 114
>cd06909 M14_ASPA Aspartoacylase (ASPA) belongs to the Succinylglutamate desuccinylase/aspartoacylase subfamily of the M14 family of metallocarboxypeptidases. ASPA (also known as aminoacylase 2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=97.88 E-value=0.00019 Score=74.07 Aligned_cols=96 Identities=17% Similarity=0.173 Sum_probs=59.1
Q ss_pred eEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCCccCCCC
Q psy7679 172 ARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDSKCLGDR 251 (608)
Q Consensus 172 ~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~~~~~~~ 251 (608)
+++.|++||+|.. | ..++.+|+++......-.+. .++++.||.++..
T Consensus 3 v~I~aGvHGnE~~--------------G-------------v~~v~~l~~~~~~~~~~~~~--v~~~i~Np~A~~~---- 49 (282)
T cd06909 3 VAIVGGTHGNELT--------------G-------------VYLVKKWLQQPELIQRPSLE--VHPVIANPRAVEA---- 49 (282)
T ss_pred EEEEcCccCChHH--------------H-------------HHHHHHHHhcccccccCCeE--EEEEecCHHHHHh----
Confidence 6789999999999 6 55666777664333222222 1455679998643
Q ss_pred CCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC------CcEEEEEEccc
Q psy7679 252 SSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDI------PFVLSANLHGG 307 (608)
Q Consensus 252 ~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~------~~~~~~~~Hs~ 307 (608)
..|.. ..||||-||-.....+ ..+.+|.+.-..+.... +.++.+|+|++
T Consensus 50 ---~~Ry~--d~DLNR~Fpg~~~~~~--~~~~~e~~~A~~l~~~l~~~~~~~~D~~iDLHst 104 (282)
T cd06909 50 ---CRRYI--DTDLNRCFTLENLSNS--ELLPYEVKRAKELNQKLGPKGNSPCDFVIDLHNT 104 (282)
T ss_pred ---CCccC--CCCCCCCCCCCccCCC--CCCCHHHHHHHHHHHHHhhccCCCceEEEECCCC
Confidence 23433 4799999997655421 11334544444443332 36899999996
No 115
>cd06256 M14_ASTE_ASPA_like_6 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=97.86 E-value=5.4e-05 Score=79.63 Aligned_cols=98 Identities=15% Similarity=0.036 Sum_probs=63.4
Q ss_pred ceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCCccCC
Q psy7679 170 SLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDSKCLG 249 (608)
Q Consensus 170 ~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~~~~~ 249 (608)
+.+++.|+.||+|.. | ..++.+|+++..... ..|..++++.||-++..
T Consensus 35 p~v~I~aGvHGNE~~--------------G-------------i~al~~ll~~~~~~~---~~~~~~l~i~Np~A~~~-- 82 (327)
T cd06256 35 PPLFVSTLLHGNEPT--------------G-------------LQAVQRLLKALEARP---LPRSLLLFIGNVAAALA-- 82 (327)
T ss_pred CeEEEEccccCCcHH--------------H-------------HHHHHHHHHhCChhh---cCCcEEEEEeCHHHHHh--
Confidence 679999999999999 7 566777777653222 22223677799988643
Q ss_pred CCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEcccce
Q psy7679 250 DRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDIPFVLSANLHGGSL 309 (608)
Q Consensus 250 ~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~ 309 (608)
..|....|-||||-||-... ...+-.++.+.+.+.+....+.+|+|++..
T Consensus 83 -----~~R~~~d~~DLNR~Fpg~~~-----s~e~r~A~~l~~~l~~~~~d~~IDLHstt~ 132 (327)
T cd06256 83 -----GVRRLDGQPDYNRCWPGPYD-----DPEGRLAEEVLELLADERPEASIDIHNNTG 132 (327)
T ss_pred -----CcccCCCCCCccCCCCCCCC-----CHHHHHHHHHHHHHHhcCCcEEEECCCCCC
Confidence 23555567899999985322 112333344444444444578999998744
No 116
>cd06240 Peptidase_M14-like_1_3 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=97.79 E-value=1.1e-05 Score=82.38 Aligned_cols=125 Identities=14% Similarity=0.053 Sum_probs=84.4
Q ss_pred EEEEcccccCCceeEEEecCCCC---------------------------------cceeeeec--cceEEEecCCCCcc
Q psy7679 58 KLHSIGKSVQNRDLWALQGGGTN---------------------------------KNKVSIIS--LYRLVTVSTTPAPI 102 (608)
Q Consensus 58 ~~~~iG~S~eGR~i~~l~Is~~~---------------------------------~~~v~~~~--hare~~~~~~~~~~ 102 (608)
++++||+|+|||+|++++||++. |+.|++.+ |++||++...+.++
T Consensus 1 ~l~~iGkS~EGR~l~~~~Iss~~n~~~ld~~~~~~~~la~~~~~~~~~a~~~~~~~kp~v~i~~~iHg~E~~g~ea~l~l 80 (273)
T cd06240 1 KLVEIGKTEEGRPQIMAAISSPENLAKLDHYKAILRKLADPRGLTEEQARALIAEGKPIVWIDGGLHSTETGGPQMLMEL 80 (273)
T ss_pred CeeEeecCCCCCeEEEEEeeChhHhhhHHHHHHHHhhhhccccccchhhhhhhccCCCEEEEECCcCCCchHHHHHHHHH
Confidence 47899999999999999998632 34566655 77777766555544
Q ss_pred ccccccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCcccee-EEe------
Q psy7679 103 EEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLA-RFV------ 175 (608)
Q Consensus 103 ~~~l~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~-~~~------ 175 (608)
+..|+. .+.+++.++|+ +..+ ++.|+.||||.+... |+.
T Consensus 81 ~~~L~~-------------~~d~~~~~lLd--------------------~~~i-~i~P~~NPDG~er~~~w~~~~~~~~ 126 (273)
T cd06240 81 AYRLAT-------------EEDPEIKRILD--------------------NVIV-LIVPVANPDGRDRVVDWYMRTLGPP 126 (273)
T ss_pred HHHHHh-------------cCCHHHHHHHh--------------------cCEE-EEEeCcCCCHHHHhhhhhhhccCCc
Confidence 444432 02233333333 3334 477999999998642 110
Q ss_pred ----C-----CCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceee
Q psy7679 176 ----G-----RNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLH 232 (608)
Q Consensus 176 ----g-----~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h 232 (608)
. ..|..+.||||+|-.. +.||++++.+.+.+......+++|
T Consensus 127 ~~~~~~~~~~~~~y~g~DlNRD~~~~----------------~~~et~~~~~~~~~w~P~v~~D~H 176 (273)
T cd06240 127 KRDRSPLPPLYGKYVGHDNNRDGYMN----------------QQETTNNSRKLFLEWHPQIMYDLH 176 (273)
T ss_pred ccCCCCcccccCccCCcCCCcccchh----------------cCHHHHHHHHHHHhcCCcEEEEcc
Confidence 0 3467889999999652 248899999988888766777888
No 117
>cd06910 M14_ASTE_ASPA_like_7 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=97.77 E-value=6.8e-05 Score=77.13 Aligned_cols=109 Identities=15% Similarity=0.051 Sum_probs=64.4
Q ss_pred eeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCCccCCC
Q psy7679 171 LARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDSKCLGD 250 (608)
Q Consensus 171 ~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~~~~~~ 250 (608)
.+++.+++||+|.. | ..++.+++.+.....+-++. +++.||-++... +
T Consensus 2 ~v~isagvHGnE~~--------------G-------------i~al~~l~~~~~~~l~G~li----~~~~N~~A~~~~-~ 49 (272)
T cd06910 2 HVMINALVHGNEIC--------------G-------------AIALDALLREGLRPRRGRLT----LAFANVAAYARF-D 49 (272)
T ss_pred EEEEEcCcccChHH--------------H-------------HHHHHHHHhCcccccCCCEE----EEEECHHHHHhc-c
Confidence 47889999999999 7 55666666642222233343 448999886421 1
Q ss_pred CCCC-CCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEcccceeeeecCCC
Q psy7679 251 RSSM-IGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDI-PFVLSANLHGGSLVANYPYDD 317 (608)
Q Consensus 251 ~~~~-~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~-~~~~~~~~Hs~~~~i~yP~~~ 317 (608)
+.+. ..| ..+.||||.||-.|...+ -...|.+.-..+..-. ..++.+|+|+++. -.+||..
T Consensus 50 ~~~p~~~R--~~~~dLNR~Fpg~~~~g~---~~~~e~~~A~~l~~~i~~aD~~iDLHt~~~-~~~p~~~ 112 (272)
T cd06910 50 PNNPTASR--FVDEDMNRVWSPDVLDGP---RDSIELRRARELRPVIDTADYLLDLHSMQW-PSPPLIL 112 (272)
T ss_pred cCCCcccc--cCCCCcCCCCCCcccCCC---cccHHHHHHHHHHHHHhhCCEEEECCCCCC-CCCCEEE
Confidence 1111 112 125799999996553321 1235555544443222 3569999999988 4577765
No 118
>cd03855 M14_ASTE Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3.5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily of the M14 family of metallocarboxypeptidases. This group includes succinylglutamate desuccinylase that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes N-succinyl-L-glutamate to succinate and L-glutamate.
Probab=97.76 E-value=0.00029 Score=74.28 Aligned_cols=95 Identities=20% Similarity=0.171 Sum_probs=58.1
Q ss_pred cceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC---CceeeceeeeeeeeeecCCCCC
Q psy7679 169 NSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN---PFVLSGNLHGGAIVASYPFDDS 245 (608)
Q Consensus 169 ~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~---~~l~~~~~h~g~ivp~~NpDG~ 245 (608)
.+.+++.+++||+|.. | ..++.+++++. .+.....+ ++++.||.++
T Consensus 42 gp~v~IsaGvHGNE~~--------------G-------------i~~l~~ll~~l~~~~l~~~~~v----~~~~~Np~A~ 90 (322)
T cd03855 42 TKAIVISAGVHGNETA--------------P-------------IEILNQLIKDLLAGELPLAHRL----LFIFGNPPAM 90 (322)
T ss_pred CCeEEEEccccCCchh--------------H-------------HHHHHHHHHhhhhccccCCeEE----EEEeeCHHHH
Confidence 4668999999999999 7 34444555432 22212222 5678999886
Q ss_pred ccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHH-------HHHHHHHhC---CcEEEEEEccc
Q psy7679 246 KCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETL-------AVEKWLQDI---PFVLSANLHGG 307 (608)
Q Consensus 246 ~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~-------ai~~~~~~~---~~~~~~~~Hs~ 307 (608)
.. ..|.. ..||||-||-.+... -+..|++ .+..++... ...+.+|+|+.
T Consensus 91 ~~-------~~R~~--d~DLNR~FpG~~~~~----~~~~E~~rA~~L~~~~~~~~~~~~~~~~d~~iDLHta 149 (322)
T cd03855 91 RA-------GERFV--DENLNRLFSGRHQKD----EPGPERARAAELEQAVADFFAAGPSGAERWHYDLHTA 149 (322)
T ss_pred Hh-------CcccC--CCCccCCCCCCcccC----CCChHHHHHHHHHHHHHHHHhhcccccCcEEEEccCC
Confidence 43 12322 259999999654421 1234543 234455554 46899999995
No 119
>COG3608 Predicted deacylase [General function prediction only]
Probab=97.75 E-value=0.00058 Score=70.89 Aligned_cols=189 Identities=22% Similarity=0.225 Sum_probs=106.7
Q ss_pred CCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCCC
Q psy7679 166 GSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDS 245 (608)
Q Consensus 166 dg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~ 245 (608)
+|..++++++++.||+|.- |... .+.|+.+|..-+ ..=+++ +||.+||=+.
T Consensus 45 ~g~gp~~~l~ag~HGdEl~--------------G~~a----------l~~Li~~L~~a~--i~GtV~---iVP~aN~~a~ 95 (331)
T COG3608 45 NGPGPSVLLQAGVHGDELP--------------GVIA----------LRRLIPALDPAD--ISGTVI---IVPIANPPAF 95 (331)
T ss_pred CCCCCEEEEEecccccccc--------------hHHH----------HHHHHHhcCHhh--cCceEE---EEeccCHHHH
Confidence 3445779999999999998 6432 444444444322 455677 9999997774
Q ss_pred ccCCCCCCCCCCCc-ccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCC---cEEEEEEcccceeeeec-CCCCCC
Q psy7679 246 KCLGDRSSMIGRKN-AHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDIP---FVLSANLHGGSLVANYP-YDDNQA 320 (608)
Q Consensus 246 ~~~~~~~~~~~R~n-~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~~---~~~~~~~Hs~~~~i~yP-~~~~~~ 320 (608)
.+ .+|.. ..+.|+||+||-. + .-.=|.++.++++++- .++.+|||+++.-..|- |...
T Consensus 96 ~~-------~~R~~p~d~~N~NR~fPg~-------~-dgs~t~ria~~l~r~L~~~aD~VlDlHsg~~~~~~~~~i~~-- 158 (331)
T COG3608 96 EA-------QGRFSPGDDTNLNRAFPGR-------P-DGSATERIADRLKRLLLPLADIVLDLHSGGEGLDYLPYILA-- 158 (331)
T ss_pred Hh-------hcccCCCCCCcccccCCCC-------C-CCCHHHHHHHHHHHhhhcccCEEEEccCCCCcccccceecc--
Confidence 43 23443 3778999999821 1 1223566677775552 57899999998876553 6332
Q ss_pred CCCCCCCCCCCHHHHHHHHHHH--HHhhccccCCCCCCCCCCCCCCCcccccceeeeccCcccchhhhccCeEEEEEeec
Q psy7679 321 MKPQVDSPTPDDSIFKLLASSY--ANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELG 398 (608)
Q Consensus 321 ~~~~~~~~~~d~~~~~~la~~~--a~~~~~~~~~~~~~~~~~~~f~~g~~~g~~~Y~~~G~~~Dw~y~~~~~~~~t~El~ 398 (608)
...||. +.+++.+ +++...-+ | ..|.... .-++.+=.-...++.++|.|++
T Consensus 159 ------~~~p~~---~~~a~al~~~~~f~~~~----~-----~~~~~~~---------~~g~l~~~~~~~gi~~iT~E~g 211 (331)
T COG3608 159 ------HEIPDI---ASLAKALAIAAAFGSPY----S-----VIFDEAD---------ADGMLRTAAERAGIPVITVELG 211 (331)
T ss_pred ------ccCCcH---HHHHHHHHHHHHhcCCc----c-----eeecccC---------chhHHHHHHHHcCCcEEEeeec
Confidence 123443 2333332 33332200 0 0010111 1123333445678999999999
Q ss_pred CCCCCCCCCcchHHHhhhhhhhhhHHHhhcceeeEEEC
Q psy7679 399 CYKFPPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKG 436 (608)
Q Consensus 399 ~~~~P~~~~l~~~w~~N~~alls~~eqv~~gI~G~V~D 436 (608)
.+.--. +..-+.....++.|+. -.|.|.+
T Consensus 212 g~g~v~----~~~i~~~~~gi~n~L~-----~~Gil~g 240 (331)
T COG3608 212 GAGDVD----AESIEIAAEGILNFLR-----HRGILAG 240 (331)
T ss_pred CccccC----HHHHHHHHHHHHHHHH-----HhCeecC
Confidence 853211 1223345566666665 2466665
No 120
>PRK05324 succinylglutamate desuccinylase; Provisional
Probab=97.53 E-value=0.0005 Score=72.56 Aligned_cols=95 Identities=19% Similarity=0.138 Sum_probs=57.3
Q ss_pred cceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC---CceeeceeeeeeeeeecCCCCC
Q psy7679 169 NSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN---PFVLSGNLHGGAIVASYPFDDS 245 (608)
Q Consensus 169 ~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~---~~l~~~~~h~g~ivp~~NpDG~ 245 (608)
.+.+.+.+++||+|.. | ..++.++++.. .+.....+ ++++.||.++
T Consensus 47 gp~v~IsaGvHGNE~~--------------G-------------i~~l~~Ll~~l~~~~~~~~~~v----~~i~~Np~A~ 95 (329)
T PRK05324 47 TKALVLSAGIHGNETA--------------P-------------IELLDQLVRDLLAGELPLRARL----LVILGNPPAM 95 (329)
T ss_pred CCeEEEECCcccCcHH--------------H-------------HHHHHHHHHhhhccccccCceE----EEEecCHHHH
Confidence 4678999999999999 7 34444555432 22122233 5678999986
Q ss_pred ccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHH-------HHHHHHHhC--CcEEEEEEccc
Q psy7679 246 KCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETL-------AVEKWLQDI--PFVLSANLHGG 307 (608)
Q Consensus 246 ~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~-------ai~~~~~~~--~~~~~~~~Hs~ 307 (608)
.. ..|.. ..||||-||-.+.... +.+|.+ .+..|+... ..++.+|+|+.
T Consensus 96 ~~-------~~R~v--d~DLNR~FpG~~~~~~----~~~E~~rA~~L~~~i~~~~~~~~~~~D~~iDLHta 153 (329)
T PRK05324 96 RA-------GKRYL--DEDLNRLFGGRHQQFP----GSDEARRAAELEQAVEDFFAAGAERVRWHYDLHTA 153 (329)
T ss_pred Hh-------CcccC--CCCcccCCCCCcCCCC----CcHHHHHHHHHHHHHHHHhcccCccceEEEECCCC
Confidence 43 12433 3699999997665431 112552 222333221 25799999984
No 121
>PRK15036 hydroxyisourate hydrolase; Provisional
Probab=97.42 E-value=0.0006 Score=62.41 Aligned_cols=57 Identities=14% Similarity=0.230 Sum_probs=48.7
Q ss_pred ceeeEEEC-CCCCcccCceEEEcCce-------eeEEeCCCeeEEE----e-cCCceEEEEEEecceeeE
Q psy7679 429 GVAGFVKG-REGEGVAGASIAVEGLG-------HVVYSAQDGDYWR----L-LAPGNYTLHVSAPGYEPA 485 (608)
Q Consensus 429 gI~G~V~D-~~g~pl~~A~V~i~g~~-------~~~~Td~~G~f~~----~-l~~g~y~l~~s~~GY~~~ 485 (608)
.|+|.|.| .+|+|++|+.|.|.... ..+.||.||.|.. . +.+|.|+|++...+|-..
T Consensus 28 ~Is~HVLDt~~G~PA~gV~V~L~~~~~~~w~~l~~~~Td~dGR~~~l~~~~~~~~G~Y~L~F~t~~Yf~~ 97 (137)
T PRK15036 28 ILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKK 97 (137)
T ss_pred CeEEEEEeCCCCcCCCCCEEEEEEccCCceEEEEEEEECCCCCCccccCcccCCCeeEEEEEEcchhhhc
Confidence 59999999 78999999999998654 4678999999953 2 578999999998888763
No 122
>TIGR03242 arg_catab_astE succinylglutamate desuccinylase. Members of this protein family are succinylglutamate desuccinylase, the fifth and final enzyme of the arginine succinyltransferase (AST) pathway for arginine catabolism. This model excludes the related protein aspartoacylase.
Probab=97.37 E-value=0.00058 Score=71.89 Aligned_cols=102 Identities=19% Similarity=0.125 Sum_probs=60.2
Q ss_pred EEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC---Cceeeceeeeee
Q psy7679 159 LVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN---PFVLSGNLHGGA 235 (608)
Q Consensus 159 l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~---~~l~~~~~h~g~ 235 (608)
++|...+ .+.+++.+++||+|.. | ..++.+|++.. .+.....+
T Consensus 34 ~~p~~~~---gp~v~IsaGvHGNE~~--------------G-------------i~~l~~ll~~l~~~~~~~~~~l---- 79 (319)
T TIGR03242 34 LTPHAPP---QKSLVISAGIHGNETA--------------P-------------IEILEQLLGDIAAGKLPLRVRL---- 79 (319)
T ss_pred EecCCCC---CCEEEEEcCcccchHH--------------H-------------HHHHHHHHhhhhhccccCCceE----
Confidence 4454433 2568999999999999 7 44455555543 22223334
Q ss_pred eeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHH-------HHHHHHHhC---CcEEEEEEc
Q psy7679 236 IVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETL-------AVEKWLQDI---PFVLSANLH 305 (608)
Q Consensus 236 ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~-------ai~~~~~~~---~~~~~~~~H 305 (608)
++++.||.++.. ..|.. ..||||-||-.+... -...|++ .+..++... ..++.+|+|
T Consensus 80 ~~i~~Np~A~~~-------~~R~~--~~DLNR~FpG~~~~~----~~~~E~~rA~~l~~~~~~~~~~~~~~~~D~~IDLH 146 (319)
T TIGR03242 80 LVILGNPPAMRT-------GKRYL--HDDLNRMFGGRYQQL----APSFETCRAAELEQCVEDFFSQGGRSVARWHYDLH 146 (319)
T ss_pred EEEEcCHHHHHh-------CcccC--CCCccCCCCCccccc----cCchHHHHHHHHHHHHHHHhccccCccceEEEECC
Confidence 455789998642 22433 369999998544321 0123443 222355443 247999999
Q ss_pred cc
Q psy7679 306 GG 307 (608)
Q Consensus 306 s~ 307 (608)
+.
T Consensus 147 t~ 148 (319)
T TIGR03242 147 TA 148 (319)
T ss_pred CC
Confidence 86
No 123
>PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins. It is named after the characteristic PEGA sequence motif found in this domain. The secondary structure of this domain is predicted to be beta-strands.
Probab=97.18 E-value=0.002 Score=51.99 Aligned_cols=59 Identities=34% Similarity=0.483 Sum_probs=49.2
Q ss_pred cCceEEEcCceeeEEeCCCeeEEEe-cCCceEEEEEEecceeeEEEEEEEecCCcceEEEEEEecc
Q psy7679 443 AGASIAVEGLGHVVYSAQDGDYWRL-LAPGNYTLHVSAPGYEPAIHQVSVENSTKATQLNITLARI 507 (608)
Q Consensus 443 ~~A~V~i~g~~~~~~Td~~G~f~~~-l~~g~y~l~~s~~GY~~~~~~v~v~~~~~~~~~~i~L~~~ 507 (608)
++|.|.|.|...+ .|. ..+. +++|.|+|.+++.||++.+..|.+. .++...+++.|++.
T Consensus 11 ~gA~V~vdg~~~G-~tp----~~~~~l~~G~~~v~v~~~Gy~~~~~~v~v~-~~~~~~v~~~L~~~ 70 (71)
T PF08308_consen 11 SGAEVYVDGKYIG-TTP----LTLKDLPPGEHTVTVEKPGYEPYTKTVTVK-PGETTTVNVTLEPQ 70 (71)
T ss_pred CCCEEEECCEEec-cCc----ceeeecCCccEEEEEEECCCeeEEEEEEEC-CCCEEEEEEEEEEC
Confidence 6899999987776 222 2343 8899999999999999999999998 78888899999864
No 124
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=97.12 E-value=0.0031 Score=51.64 Aligned_cols=51 Identities=29% Similarity=0.476 Sum_probs=44.7
Q ss_pred ceeeEEECCCCCcccCceEEEcCcee----eEEeCCCeeEEEecCCceEEEEEEec
Q psy7679 429 GVAGFVKGREGEGVAGASIAVEGLGH----VVYSAQDGDYWRLLAPGNYTLHVSAP 480 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~g~~~----~~~Td~~G~f~~~l~~g~y~l~~s~~ 480 (608)
-|.|+|+ .+|+|+++|-|.+.+.+. .+.|...|.|.+-..||+.+|.+-..
T Consensus 9 VItG~V~-~~G~Pv~gAyVRLLD~sgEFtaEvvts~~G~FRFfaapG~WtvRal~~ 63 (85)
T PF07210_consen 9 VITGRVT-RDGEPVGGAYVRLLDSSGEFTAEVVTSATGDFRFFAAPGSWTVRALSR 63 (85)
T ss_pred EEEEEEe-cCCcCCCCeEEEEEcCCCCeEEEEEecCCccEEEEeCCCceEEEEEcc
Confidence 4899999 999999999999997643 57899999999988999999998654
No 125
>KOG3641|consensus
Probab=96.62 E-value=0.0024 Score=69.48 Aligned_cols=151 Identities=15% Similarity=0.090 Sum_probs=93.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCC-C-ceEEEEcccccCCceeEEEecCCC---Ccceeeeec--cceEEEecCCCCcccc
Q psy7679 32 ENPHYLSFDELTKFLVAAAQQNP-S-KVKLHSIGKSVQNRDLWALQGGGT---NKNKVSIIS--LYRLVTVSTTPAPIEE 104 (608)
Q Consensus 32 ~~~~y~~y~ei~~~l~~la~~~p-~-~~~~~~iG~S~eGR~i~~l~Is~~---~~~~v~~~~--hare~~~~~~~~~~~~ 104 (608)
.|.-=+||..|.-+|+.|+..-+ . ..+-..++.|..||++..+.|... +++.|++.+ |+-|-. ..+
T Consensus 375 aYhypyTy~~l~~hLn~les~~~~~~yfr~dVl~~tl~g~~~~l~tI~~ae~~~~~~IfLSaRVHpgeTn----sSw--- 447 (650)
T KOG3641|consen 375 AYHYPYTYSQLQCHLNGLESPKNPAFYFRYDVLLFTLVGRAMALATIDMAECAPRPVIFLSARVHPGETN----SSW--- 447 (650)
T ss_pred eeccCccHHHHHhhhhcccCCCCcCcccchheeeeeecCCccceEEeeHhhcCCcceEEEecccCCCCCc----HHH---
Confidence 33334599999999999997654 2 467888999999999999999732 455566654 432211 111
Q ss_pred ccccccccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCC--cc
Q psy7679 105 DIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNA--NG 182 (608)
Q Consensus 105 ~l~~~~~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha--~e 182 (608)
.|...|+-|..+.|....+. ..-++.+.|+.||||. +.|+..| .|
T Consensus 448 ---------------------vmkGilefl~s~~p~aq~LR-------e~~vFKI~PMLNPDGV-----~~GnyRCSL~G 494 (650)
T KOG3641|consen 448 ---------------------VMKGILEFLVSNSPLAQGLR-------ESYVFKIVPMLNPDGV-----IVGNYRCSLMG 494 (650)
T ss_pred ---------------------HHHHHHHHhhcCCcHHHhhh-------hheeEecccccCCCce-----ecccceecccc
Confidence 24455666666665443322 2236677799999984 4565555 47
Q ss_pred cccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC---Cceeeceee
Q psy7679 183 VDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN---PFVLSGNLH 232 (608)
Q Consensus 183 vdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~---~~l~~~~~h 232 (608)
.||||-|...-......... +++|+..+.+. ..+...++|
T Consensus 495 ~DLNR~w~tps~~shPsi~~----------~k~li~~l~~~~~~~p~~Y~DlH 537 (650)
T KOG3641|consen 495 LDLNRMWSTPSPASHPSIYA----------VKQLIQQLSNVPHSRPLGYVDLH 537 (650)
T ss_pred chhhhhcCCCCcccchhHHh----------HHHHHhhhhcccccCceEeeccc
Confidence 89999987653211111111 56666666554 256666777
No 126
>cd00421 intradiol_dioxygenase Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates. This family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases which are mononuclear non-heme iron enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings. The members are intradiol-cleaving enzymes which break the catechol C1-C2 bond and utilize Fe3+, as opposed to the extradiol-cleaving enzymes which break the C2-C3 or C1-C6 bond and utilize Fe2+ and Mn+. Catechol 1,2-dioxygenases are mostly homodimers with one catalytic ferric ion per monomer. Protocatechuate 3,4-dioxygenases form more diverse oligomers.
Probab=96.41 E-value=0.0091 Score=55.53 Aligned_cols=46 Identities=24% Similarity=0.338 Sum_probs=38.0
Q ss_pred ceeeEEECCCCCcccCceEEEcCce--------------------eeEEeCCCeeEEE-ecCCceEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVEGLG--------------------HVVYSAQDGDYWR-LLAPGNYT 474 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~g~~--------------------~~~~Td~~G~f~~-~l~~g~y~ 474 (608)
.|.|+|+|.+|.|+++|.|.|--.. ....||.+|.|.+ .+.||.|.
T Consensus 13 ~l~G~V~D~~g~pv~~A~VeiW~~d~~G~Y~~~~~~~~~~~~~~rg~~~Td~~G~y~f~ti~Pg~Y~ 79 (146)
T cd00421 13 TLTGTVLDGDGCPVPDALVEIWQADADGRYSGQDDSGLDPEFFLRGRQITDADGRYRFRTIKPGPYP 79 (146)
T ss_pred EEEEEEECCCCCCCCCcEEEEEecCCCCccCCcCccccCCCCCCEEEEEECCCcCEEEEEEcCCCCC
Confidence 4899999999999999999994211 1468999999965 68999988
No 127
>COG2988 Succinylglutamate desuccinylase [Amino acid transport and metabolism]
Probab=96.15 E-value=0.034 Score=56.22 Aligned_cols=191 Identities=18% Similarity=0.075 Sum_probs=96.1
Q ss_pred HHHhCCCceeeeecccc--ccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchH
Q psy7679 134 ITKNYPNLTRLYSVGQS--VEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEP 211 (608)
Q Consensus 134 l~~~~p~~~~l~~ig~s--~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~seP 211 (608)
|..+.|.++....-|.. +-++-+.-++|..+.|+ .+.+.+++||||.. +.+.
T Consensus 9 l~~~~p~v~q~~~~g~~~~wl~~g~le~~p~~~r~~---~lvIsaGiHGNEta--------------pvEl--------- 62 (324)
T COG2988 9 LSGKKPVVTQREINGVRWRWLGEGVLELTPLAPRDG---SLVISAGIHGNETA--------------PVEL--------- 62 (324)
T ss_pred hcCCCCeeeeeccCceEEEEeccceeeeccCCCCCC---ceEEEecccCCccC--------------cHHH---------
Confidence 34445655543333321 12222333445555444 58899999999999 7544
Q ss_pred HHHHHHHHHhcCCceeeceeeeeeeeeecCCCCCccCCCCCCCCCCCcccccCCCCCCCCCCCCCC-C--CCCCcHHHHH
Q psy7679 212 ETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSK-Y--NSVPEPETLA 288 (608)
Q Consensus 212 Et~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG~~~~~~~~~~~~R~n~~GvDLNRnf~~~w~~~~-~--~~~sepEt~a 288 (608)
...+...+....+-.....+ +.+-||--.+. ..|. .-=||||=|...|..-. . ....|-|- +
T Consensus 63 -l~kl~~~~~ag~~p~a~r~L----~ilgNP~Ai~~-------gkRY--ieqDlNR~F~gr~q~~~~ne~~ra~eler-~ 127 (324)
T COG2988 63 -LDKLQQKISAGQLPLAWRCL----VILGNPPAIAA-------GKRY--IEQDLNRMFGGRPQSFSENETLRAYELER-A 127 (324)
T ss_pred -HHHHHhhhhhcccCcceeEE----EEecCcHHHHh-------chHH--HhhhHHHHhCCCcccCCCCchhhhHHHHH-H
Confidence 33344433333333333443 44667755221 0111 12399999988776532 1 12233333 3
Q ss_pred HHHHHHhC--CcEEEEEEcccce------eeeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q psy7679 289 VEKWLQDI--PFVLSANLHGGSL------VANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPE 360 (608)
Q Consensus 289 i~~~~~~~--~~~~~~~~Hs~~~------~i~yP~~~~~~~~~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~~ 360 (608)
+..|...- ...+.+|+|+... ..++|+.. ++-..+++.+|. .++...
T Consensus 128 ~q~ff~~~~~~vr~h~DLHtairgs~h~~f~~~P~~~----------~~~~~~l~a~L~----~a~~ea----------- 182 (324)
T COG2988 128 LQDFFQQGKESVRWHLDLHTAIRGSGHPQFGVLPQPD----------RPWSLKLLAWLS----AAGLEA----------- 182 (324)
T ss_pred HHHHHhcCCCcceEEEEhhhhhhccCCcceeeCCCCC----------chhHHHHHHHHH----hCCcce-----------
Confidence 33443333 3578899996532 22334332 111233333333 222211
Q ss_pred CCCCCcccccceeeeccC-cccchhhhccCeEEEEEeecCC
Q psy7679 361 ENFPGGIVNGAQWYVVSG-GMQDYNYIHANTLEITLELGCY 400 (608)
Q Consensus 361 ~~f~~g~~~g~~~Y~~~G-~~~Dw~y~~~~~~~~t~El~~~ 400 (608)
..++.++| ++.-|.+.+.+..++|+|||..
T Consensus 183 ----------~vl~~~Pg~tf~~~ss~~l~ala~TLELGka 213 (324)
T COG2988 183 ----------LVLHTSPGGTFSHFSSEHLGALACTLELGKA 213 (324)
T ss_pred ----------EEEEcCCCCCchhhchhhhhheeeEEeeccc
Confidence 12333444 4444456789999999999974
No 128
>PF02369 Big_1: Bacterial Ig-like domain (group 1); InterPro: IPR003344 Proteins that contain this domain are found in a variety of bacterial and phage surface proteins such as intimins. Intimin is a bacterial cell-adhesion molecule that mediates the intimate bacterial host-cell interaction. It contains three domains; two immunoglobulin-like domains and a C-type lectin-like module implying that carbohydrate recognition may be important in intimin-mediated cell adhesion [].; PDB: 1CWV_A 4E9L_A 1F02_I 1F00_I.
Probab=95.94 E-value=0.05 Score=47.11 Aligned_cols=62 Identities=18% Similarity=0.260 Sum_probs=44.1
Q ss_pred ceeeEEECCCCCcccCceEEE--c--Ccee-----eEEeCCCeeEEEe---cCCceEEEEEEecceeeEEEEEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAV--E--GLGH-----VVYSAQDGDYWRL---LAPGNYTLHVSAPGYEPAIHQVS 490 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i--~--g~~~-----~~~Td~~G~f~~~---l~~g~y~l~~s~~GY~~~~~~v~ 490 (608)
.|+-+|+|..|+||+|..|.+ . +... ...||.+|.+... -.+|.|+|.++..|-......+.
T Consensus 26 tltatV~D~~gnpv~g~~V~f~~~~~~~~l~~~~~~~~Td~~G~a~~tltst~aG~~~VtA~~~~~~~~~~~~~ 99 (100)
T PF02369_consen 26 TLTATVTDANGNPVPGQPVTFSSSSSGGTLSPTNTSATTDSNGIATVTLTSTKAGTYTVTATVDGGSTSVTSVT 99 (100)
T ss_dssp EEEEEEEETTSEB-TS-EEEE--EESSSEES-CEE-EEE-TTSEEEEEEE-SS-EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEcCCCCCCCCCEEEEEEcCCCcEEecCccccEECCCEEEEEEEEecCceEEEEEEEECCcceeEEeee
Confidence 488899999999999999999 2 1111 2689999999553 46799999999998777655443
No 129
>PF00775 Dioxygenase_C: Dioxygenase; InterPro: IPR000627 This entry represents the C-terminal domain common to several intradiol ring-cleavage dioxygenases. Dioxygenases catalyse the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms. Cleavage of aromatic rings is one of the most important functions of dioxygenases, which play key roles in the degradation of aromatic compounds. The substrates of ring-cleavage dioxygenases can be classified into two groups according to the mode of scission of the aromatic ring. Intradiol enzymes use a non-haem Fe(III) to cleave the aromatic ring between two hydroxyl groups (ortho-cleavage), whereas extradiol enzymes (IPR000486 from INTERPRO) use a non-haem Fe(II) to cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon (meta-cleavage) []. These two subfamilies differ in sequence, structural fold, iron ligands, and the orientation of second sphere active site amino acid residues. Enzymes that belong to the intradiol family include catechol 1,2-dioxygenase (1,2-CTD) (1.13.11.1 from EC); protocatechuate 3,4-dioxygenase (3,4-PCD) (1.13.11.3 from EC); and chlorocatechol 1,2-dioxygenase (1.13.11.1 from EC) [].; GO: 0003824 catalytic activity, 0008199 ferric iron binding, 0006725 cellular aromatic compound metabolic process, 0055114 oxidation-reduction process; PDB: 2BUV_A 2BUX_A 2BUU_A 2BUR_A 1EO9_A 2BUZ_A 2BV0_A 1EO2_A 1EOC_A 1EOA_A ....
Probab=95.80 E-value=0.042 Score=53.03 Aligned_cols=47 Identities=30% Similarity=0.473 Sum_probs=33.0
Q ss_pred ceeeEEECCCCCcccCceEEEc-----C---------------ceeeEEeCCCeeEEE-ecCCceEEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE-----G---------------LGHVVYSAQDGDYWR-LLAPGNYTL 475 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~-----g---------------~~~~~~Td~~G~f~~-~l~~g~y~l 475 (608)
.|.|+|+|.+|+||++|.|.|= | ......||.+|.|.+ .+.||.|.+
T Consensus 31 ~l~G~V~D~~g~Pv~~A~veiWqada~G~Ys~~~~~~~~~~~~~rG~~~Td~~G~y~f~Ti~Pg~Y~~ 98 (183)
T PF00775_consen 31 VLHGRVIDTDGKPVPGALVEIWQADADGRYSGQDPGSDQPDFNLRGRFRTDADGRYSFRTIKPGPYPI 98 (183)
T ss_dssp EEEEEEEETTSSB-TTEEEEEEE--TTS--TTTBTTSSSSTTTTEEEEEECTTSEEEEEEE----EEE
T ss_pred EEEEEEECCCCCCCCCcEEEEEecCCCCccccccccccccCCCcceEEecCCCCEEEEEeeCCCCCCC
Confidence 4899999999999999999991 1 112568999999964 688888863
No 130
>cd03458 Catechol_intradiol_dioxygenases Catechol intradiol dioxygenases can be divided into several subgroups according to their substrate specificity for catechol, chlorocatechols and hydroxyquinols. Almost all members of this family are homodimers containing one ferric ion (Fe3+) per monomer. They belong to the intradiol dioxygenase family, a family of mononuclear non-heme iron intradiol-cleaving enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings.
Probab=95.70 E-value=0.038 Score=55.91 Aligned_cols=45 Identities=31% Similarity=0.464 Sum_probs=35.9
Q ss_pred ceeeEEECCCCCcccCceEEEc-----Cc-------------eeeEEeCCCeeEEE-ecCCceE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE-----GL-------------GHVVYSAQDGDYWR-LLAPGNY 473 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~-----g~-------------~~~~~Td~~G~f~~-~l~~g~y 473 (608)
-+.|+|+|.+|+||++|.|-|= |. .....||.+|.|.+ .+.||.|
T Consensus 106 ~l~G~V~D~~G~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~lRG~~~Td~~G~y~f~Ti~P~~Y 169 (256)
T cd03458 106 FVHGTVTDTDGKPLAGATVDVWHADPDGFYSQQDPDQPEFNLRGKFRTDEDGRYRFRTIRPVPY 169 (256)
T ss_pred EEEEEEEcCCCCCCCCcEEEEEccCCCCCcCCCCCCCCCCCCEEEEEeCCCCCEEEEEECCCCc
Confidence 4899999999999999999982 10 11468999999965 6888877
No 131
>TIGR02465 chlorocat_1_2 chlorocatechol 1,2-dioxygenase. Members of this protein family are chlorocatechol 1,2-dioxygenase. This protein is closely related to catechol 1,2-dioxygenase, TIGR02439, EC 1.13.11.1. Note that annotated database entries have appeared for the present protein family with the EC number that refers to that of family TIGR02439. This protein acts in pathways of the biodegradation of chlorinated aromatic compounds.
Probab=95.54 E-value=0.046 Score=55.06 Aligned_cols=45 Identities=36% Similarity=0.403 Sum_probs=35.8
Q ss_pred ceeeEEECCCCCcccCceEEEc-----Cc-------------eeeEEeCCCeeEEE-ecCCceE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE-----GL-------------GHVVYSAQDGDYWR-LLAPGNY 473 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~-----g~-------------~~~~~Td~~G~f~~-~l~~g~y 473 (608)
-|+|+|+|.+|+||++|.|-|= |. .....||.+|.|.+ .+.||.|
T Consensus 100 ~v~G~V~D~~G~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~lRG~~~Td~~G~y~F~Ti~P~~Y 163 (246)
T TIGR02465 100 LIRGTVRDLSGTPVAGAVIDVWHSTPDGKYSGFHDNIPDDYYRGKLVTAADGSYEVRTTMPVPY 163 (246)
T ss_pred EEEEEEEcCCCCCcCCcEEEEECCCCCCCCCCCCCCCCCCCCeEEEEECCCCCEEEEEECCCCC
Confidence 4899999999999999999982 10 11468999999965 5788776
No 132
>cd03462 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) (type II enzymes) are homodimeric intradiol dioxygenases that degrade chlorocatechols via the addition of molecular oxygen and the subsequent cleavage between two adjacent hydroxyl groups. This reaction is part of the modified ortho-cleavage pathway which is a central oxidative bacterial pathway that channels chlorocatechols, derived from the degradation of chlorinated benzoic acids, phenoxyacetic acids, phenols, benzenes, and other aromatics into the energy-generating tricarboxylic acid pathway.
Probab=95.49 E-value=0.049 Score=54.77 Aligned_cols=45 Identities=36% Similarity=0.382 Sum_probs=35.7
Q ss_pred ceeeEEECCCCCcccCceEEEc-----Cc-------------eeeEEeCCCeeEEE-ecCCceE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE-----GL-------------GHVVYSAQDGDYWR-LLAPGNY 473 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~-----g~-------------~~~~~Td~~G~f~~-~l~~g~y 473 (608)
-++|+|+|.+|+||++|.|-|= |. .....||.+|.|.+ .+.||.|
T Consensus 101 ~l~G~V~D~~G~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~Td~~G~y~F~Ti~P~~Y 164 (247)
T cd03462 101 LFRGTVKDLAGAPVAGAVIDVWHSTPDGKYSGFHPNIPEDYYRGKIRTDEDGRYEVRTTVPVPY 164 (247)
T ss_pred EEEEEEEcCCCCCcCCcEEEEECCCCCCCcCCCCCCCCCCCCEEEEEeCCCCCEEEEEECCCCc
Confidence 4899999999999999999983 10 11468999999965 5788777
No 133
>TIGR02439 catechol_proteo catechol 1,2-dioxygenase, proteobacterial. Members of this family known so far are catechol 1,2-dioxygenases of the Proteobacteria. They are distinct from catechol 1,2-dioxygenases and chlorocatechol 1,2-dioxygenases of the Actinobacteria, which are quite similar to each other and resolved by separate models. This enzyme catalyzes intradiol cleavage in which catechol + O2 becomes cis,cis-muconate. Catechol is an intermediate in the catabolism of many different aromatic compounds, as is the alternative intermediate protocatechuate. In Acinetobacter lwoffii, two isozymes are present with abilities, differing somewhat, to act on catechol analogs 3-methylcatechol, 4-methylcatechol, 4-methoxycatechol, and 4-chlorocatechol.
Probab=95.37 E-value=0.056 Score=55.55 Aligned_cols=46 Identities=24% Similarity=0.465 Sum_probs=36.1
Q ss_pred ceeeEEECCCCCcccCceEEEc-----Cc-------------eeeEEeCCCeeEEE-ecCCceEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE-----GL-------------GHVVYSAQDGDYWR-LLAPGNYT 474 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~-----g~-------------~~~~~Td~~G~f~~-~l~~g~y~ 474 (608)
-|+|+|+|.+|+||++|.|-|= |. .....||.+|.|.+ .+.|+.|-
T Consensus 130 ~v~G~V~D~~G~PI~gA~VeIWqad~~G~Ys~~~~~~~~~~lRG~~~TD~~G~y~F~TI~P~~Yp 194 (285)
T TIGR02439 130 FLHGQVTDADGKPIAGAKVELWHANTKGNYSHFDKSQSEFNLRRTIITDAEGRYRARSIVPSGYG 194 (285)
T ss_pred EEEEEEECCCCCCcCCcEEEEEccCCCCCcCCCCCCCCCCCceEEEEECCCCCEEEEEECCCCCc
Confidence 3899999999999999999982 11 11468999999965 67887774
No 134
>cd03459 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate. 3,4-PCDs are large aggregates of 12 protomers, each composed of an alpha- and beta-subunit and an Fe3+ ion bound in the beta-subunit at the alpha-beta-subunit interface. 3,4-PCD is a member of the aromatic dioxygenases which are non-heme iron intradiol-cleaving enzymes that break the C1-C2 bond and utilize Fe3+.
Probab=95.14 E-value=0.073 Score=50.13 Aligned_cols=46 Identities=26% Similarity=0.375 Sum_probs=36.8
Q ss_pred ceeeEEECCCCCcccCceEEEc------------Cc-------e----eeEEeCCCeeEEE-ecCCceEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE------------GL-------G----HVVYSAQDGDYWR-LLAPGNYT 474 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~------------g~-------~----~~~~Td~~G~f~~-~l~~g~y~ 474 (608)
.|+|+|+|.+|+||++|.|.|= +. . ....||.+|.|.+ .+.||.|.
T Consensus 17 ~l~g~V~D~~g~Pv~~A~veiWqad~~G~Y~~~~~~~~~~~~~~f~~rG~~~Td~~G~~~f~Ti~Pg~Y~ 86 (158)
T cd03459 17 ILEGRVLDGDGRPVPDALVEIWQADAAGRYRHPRDSHRAPLDPNFTGFGRVLTDADGRYRFRTIKPGAYP 86 (158)
T ss_pred EEEEEEECCCCCCCCCCEEEEEccCCCCccCCccCCcccccCCCCCceeEEEECCCCcEEEEEECCCCcC
Confidence 4899999999999999999982 10 0 1368999999965 68898887
No 135
>cd03463 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4-PCD) , alpha subunit. 3,4-PCD catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate. 3,4-PCDs are large aggregates of 12 protomers, each composed of an alpha- and beta-subunit and an Fe3+ ion bound in the beta-subunit at the alpha-subunit-beta-subunit interface. 3,4-PCD is a member of the aromatic dioxygenases which are non-heme iron intradiol-cleaving enzymes that break the C1-C2 bond and utilize Fe3+.
Probab=95.13 E-value=0.071 Score=51.46 Aligned_cols=46 Identities=26% Similarity=0.380 Sum_probs=36.4
Q ss_pred ceeeEEECCCCCcccCceEEEc-----C-------------cee----eEEeCCCeeEEE-ecCCceEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE-----G-------------LGH----VVYSAQDGDYWR-LLAPGNYT 474 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~-----g-------------~~~----~~~Td~~G~f~~-~l~~g~y~ 474 (608)
-|+|+|+|.+|+||++|.|.|= | .+. ...||.+|.|.+ .+.||.|.
T Consensus 38 ~l~G~V~D~~g~Pi~gA~VeiWqad~~G~Y~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~Ti~Pg~Y~ 106 (185)
T cd03463 38 TLEGRVYDGDGAPVPDAMLEIWQADAAGRYAHPADSRRRLDPGFRGFGRVATDADGRFSFTTVKPGAVP 106 (185)
T ss_pred EEEEEEECCCCCCCCCCEEEEEcCCCCCccCCcCCcccccCCCCCcEEEEEECCCCCEEEEEEcCCCcC
Confidence 4899999999999999999982 0 111 368999999965 68888875
No 136
>cd03460 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyzes an intradiol cleavage reaction of catechol to form cis,cis-muconate. 1,2-CTDs is homodimers with one catalytic non-heme ferric ion per monomer. They belong to the aromatic dioxygenase family, a family of mononuclear non-heme iron intradiol-cleaving enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings.
Probab=95.08 E-value=0.072 Score=54.66 Aligned_cols=46 Identities=28% Similarity=0.500 Sum_probs=36.1
Q ss_pred ceeeEEECCCCCcccCceEEEc-----Cc-------------eeeEEeCCCeeEEE-ecCCceEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE-----GL-------------GHVVYSAQDGDYWR-LLAPGNYT 474 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~-----g~-------------~~~~~Td~~G~f~~-~l~~g~y~ 474 (608)
-++|+|+|.+|+||++|.|-|= |. .....||.+|.|.+ .+.||.|.
T Consensus 126 ~l~G~V~D~~G~PI~~A~VeiWqad~~G~Ys~~~~~~~~f~~RGr~~TD~~G~y~F~TI~P~~Yp 190 (282)
T cd03460 126 VMHGTVTDTDGKPVPGAKVEVWHANSKGFYSHFDPTQSPFNLRRSIITDADGRYRFRSIMPSGYG 190 (282)
T ss_pred EEEEEEECCCCCCcCCcEEEEECCCCCCCcCCCCCCCCCCCCceEEEeCCCCCEEEEEECCCCCc
Confidence 3889999999999999999982 11 01468999999965 57888773
No 137
>cd06233 Peptidase_M14-like_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=95.02 E-value=0.13 Score=52.94 Aligned_cols=118 Identities=20% Similarity=0.101 Sum_probs=65.5
Q ss_pred CCHHHHHHHHHHHHHhCCCceEEEEc---ccccCCceeEEEecCCCCc-ceeeeec--cceEEEecCCCCcccccccccc
Q psy7679 37 LSFDELTKFLVAAAQQNPSKVKLHSI---GKSVQNRDLWALQGGGTNK-NKVSIIS--LYRLVTVSTTPAPIEEDIKKNK 110 (608)
Q Consensus 37 ~~y~ei~~~l~~la~~~p~~~~~~~i---G~S~eGR~i~~l~Is~~~~-~~v~~~~--hare~~~~~~~~~~~~~l~~~~ 110 (608)
.+|+|-.+-+.+-++.....++-..+ |..=+--+|.++.|+.... +.+++.+ |.-|
T Consensus 3 ~sY~eAR~kFl~aA~~aga~~~~~~~~~~gp~g~~l~i~v~~~g~~~~~~~l~i~sGvHG~E------------------ 64 (283)
T cd06233 3 QSYAEAREKFLAAAKAAGAALESYVHPLLGPDGEALAIDVARLGPADAKRLLVITSGTHGVE------------------ 64 (283)
T ss_pred ccHHHHHHHHHHHHHHcCccceeeeccCCCCCCceeeeeEEEEcCCCCCcEEEEEecccCCc------------------
Confidence 36888777666666654333233232 2221223588888876543 3444433 3222
Q ss_pred ccccccccccCCCHHHHHHHHHHHHHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCC
Q psy7679 111 YGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFP 190 (608)
Q Consensus 111 ~~~~~~~~~~y~~~~~i~~~L~~l~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~ 190 (608)
+|-.-..+..+|+++.... ...+..+. +++..||.|... ..+.+.++|||||||-
T Consensus 65 ---------g~~Gs~~~~~ll~~~~~~~-----------~~~~~~vi-~vh~vNP~Gf~~----~~R~nedgvDLNRnf~ 119 (283)
T cd06233 65 ---------GFCGSAIQLALLRELLPRS-----------LPAGVAVL-LVHALNPYGFAH----LRRVNENNVDLNRNFL 119 (283)
T ss_pred ---------ccchHHHHHHHHHhcchhh-----------ccCCceEE-EEeCcCHHHHhh----cccCCCCCCChhhccc
Confidence 0112234456666653210 01222344 559999988654 3457889999999998
Q ss_pred CCcCCCC
Q psy7679 191 DQFDSSS 197 (608)
Q Consensus 191 ~~w~~~~ 197 (608)
+.....+
T Consensus 120 d~~~~~p 126 (283)
T cd06233 120 DFSAPLP 126 (283)
T ss_pred ccCCCCC
Confidence 8876544
No 138
>PF05738 Cna_B: Cna protein B-type domain; InterPro: IPR008454 This entry represents a repeated B region domain found in the collagen-binding surface protein Cna in Staphylococcus aureus, as well as other related domains. The B region domain of Cna has a prealbumin-like beta-sandwich fold of seven strands in two sheets with a Greek key topology []. However, this domain does not mediate collagen binding, the IPR008456 from INTERPRO region carries out that function; instead it appears to form a stalk that presents the ligand binding domain away from the bacterial cell surface. Cna is a collagen-binding MSCRAMM (Microbial Surface Component Recognizing Adhesive Matrix Molecules), and is necessary and sufficient for S. aureus cells to adhere to cartilage.; PDB: 2X5P_A 3RKP_A 3KPT_A 1VLF_T 1TI2_F 1TI6_D 1TI4_J 1VLE_V 1VLD_X 3PF2_A ....
Probab=94.90 E-value=0.086 Score=42.08 Aligned_cols=51 Identities=27% Similarity=0.451 Sum_probs=37.2
Q ss_pred ccCceEEEcCcee------eEEeCCCeeEEE-ecCCceEEEEEEe--cceeeEEEE--EEEe
Q psy7679 442 VAGASIAVEGLGH------VVYSAQDGDYWR-LLAPGNYTLHVSA--PGYEPAIHQ--VSVE 492 (608)
Q Consensus 442 l~~A~V~i~g~~~------~~~Td~~G~f~~-~l~~g~y~l~~s~--~GY~~~~~~--v~v~ 492 (608)
|+||.+.|..... ..+||.+|.|.+ .|++|.|.|+... .||...... +.+.
T Consensus 1 L~Ga~f~L~~~~~~~~~~~~~~Td~~G~~~f~~L~~G~Y~l~E~~aP~GY~~~~~~~~~~i~ 62 (70)
T PF05738_consen 1 LAGATFELYDEDGNEVIEVTVTTDENGKYTFKNLPPGTYTLKETKAPDGYQLDDTPYEFTIT 62 (70)
T ss_dssp -STEEEEEEETTSEEEEEEEEEGGTTSEEEEEEEESEEEEEEEEETTTTEEEEECEEEEEEC
T ss_pred CCCeEEEEEECCCCEEEEEEEEECCCCEEEEeecCCeEEEEEEEECCCCCEECCCceEEEEe
Confidence 5677777764321 268999999976 5899999999876 899986544 4544
No 139
>TIGR02438 catachol_actin catechol 1,2-dioxygenase, Actinobacterial. Members of this family are catechol 1,2-dioxygenases of the Actinobacteria. They are more closely related to actinobacterial chlorocatechol 1,2-dioxygenases than to proteobacterial catechol 1,2-dioxygenases, and so are built in this separate model. The member from Rhodococcus rhodochrous NCIMB 13259 (GB|AAC33003.1) is described as a homodimer with bound Fe, similarly active on catechol, 3-methylcatechol and 4-methylcatechol.
Probab=94.81 E-value=0.091 Score=53.83 Aligned_cols=46 Identities=24% Similarity=0.494 Sum_probs=36.0
Q ss_pred ceeeEEECCCCCcccCceEEEc-----Cc-------------eeeEEeCCCeeEEE-ecCCceEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE-----GL-------------GHVVYSAQDGDYWR-LLAPGNYT 474 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~-----g~-------------~~~~~Td~~G~f~~-~l~~g~y~ 474 (608)
-|.|+|+|.+|+||++|.|-|= |. .....||.+|.|.+ .+.||.|.
T Consensus 134 ~v~G~V~D~~G~Pv~gA~VdiWqada~G~Ys~~~~~~~~~~lRGr~~TDadG~y~F~TI~Pg~Yp 198 (281)
T TIGR02438 134 VFSGQVTDLDGNGLAGAKVELWHADDDGFYSQFAPGIPEWNLRGTIIADDEGRFEITTMQPAPYQ 198 (281)
T ss_pred EEEEEEEcCCCCCcCCCEEEEEecCCCCCcCCCCCCCCCCCCeEEEEeCCCCCEEEEEECCCCcC
Confidence 4899999999999999999991 21 11468999999965 57787664
No 140
>PF12985 DUF3869: Domain of unknown function (DUF3869); InterPro: IPR024620 This functionally uncharacterised domain is found in bacterial sequences, including the N-terminal region of a putative pore-forming toxin (YP_001301288.1) from Bacteroides vulgatus ATCC 8482.; PDB: 3G3L_A 3KOG_A.
Probab=94.71 E-value=0.15 Score=43.91 Aligned_cols=73 Identities=27% Similarity=0.346 Sum_probs=50.3
Q ss_pred hcceeeEEEC-CCCCccc-CceEEEcCceeeEEeCCCeeEEEecCCceEEEEEEecceeeEEEEEEEec--CCcc--eEE
Q psy7679 427 HRGVAGFVKG-REGEGVA-GASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAIHQVSVEN--STKA--TQL 500 (608)
Q Consensus 427 ~~gI~G~V~D-~~g~pl~-~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~s~~GY~~~~~~v~v~~--~~~~--~~~ 500 (608)
...|.|.|.| .+|++|. ++.+.|.+.. +|. +.++...+.+++.||.+.+.+|.++. .++. ...
T Consensus 21 ~~tI~~tV~da~tG~~vt~~a~vti~~~~-------~~~----~A~~a~~vtas~~~y~~~~~tV~vpal~~Gq~a~~~v 89 (104)
T PF12985_consen 21 KYTIAGTVYDAETGEDVTTTATVTISAGS-------DGT----LAAKAVTVTASKDGYMTGSVTVNVPALKAGQFAVYPV 89 (104)
T ss_dssp EEEEEEEEEETTTTEE-CGCSEEEETTCC-------CCC----E--ECCEEEEEECTCEEEEEEEEE--B-TT-EEEEEE
T ss_pred EEEEEEEEEecCCCCeeeccceEEEccCC-------Ccc----cccccEEEEEEccCCeeeEEEEEehhhcCCceEEEee
Confidence 3469999999 7999998 8999997655 443 45677788899999999999987763 3332 345
Q ss_pred EEEEeccccc
Q psy7679 501 NITLARINLI 510 (608)
Q Consensus 501 ~i~L~~~~~~ 510 (608)
+|.|++....
T Consensus 90 ~i~L~~~~~~ 99 (104)
T PF12985_consen 90 NIALQKEAAA 99 (104)
T ss_dssp EEEE-CTCEE
T ss_pred EEEEeecccc
Confidence 7888765443
No 141
>cd03461 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) catalyzes the ring cleavage of hydroxyquinol (1,2,4-trihydroxybenzene), a intermediate in the degradation of a large variety of aromatic compounds including some polychloro- and nitroaromatic pollutants, to form 3-hydroxy-cis,cis-muconates. 1,2-HQD blongs to the aromatic dioxygenase family, a family of mononuclear non-heme intradiol-cleaving enzymes.
Probab=94.67 E-value=0.099 Score=53.57 Aligned_cols=46 Identities=33% Similarity=0.457 Sum_probs=36.4
Q ss_pred ceeeEEECCCCCcccCceEEEc-----C-------------ceeeEEeCCCeeEEE-ecCCceEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE-----G-------------LGHVVYSAQDGDYWR-LLAPGNYT 474 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~-----g-------------~~~~~~Td~~G~f~~-~l~~g~y~ 474 (608)
-++|+|+|.+|+||++|.|-|= | ......||.+|.|.+ .+.||.|-
T Consensus 122 ~v~G~V~D~~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~lRGr~~Td~~G~y~F~Ti~Pg~Yp 186 (277)
T cd03461 122 FVHGRVTDTDGKPLPGATVDVWQADPNGLYDVQDPDQPEFNLRGKFRTDEDGRYAFRTLRPTPYP 186 (277)
T ss_pred EEEEEEEcCCCCCcCCcEEEEECcCCCCCcCCCCCCCCCCCCeEEEEeCCCCCEEEEEECCCCcC
Confidence 4899999999999999999982 1 011468999999965 57888775
No 142
>PF14686 fn3_3: Polysaccharide lyase family 4, domain II; PDB: 1NKG_A 2XHN_B 3NJX_A 3NJV_A.
Probab=94.55 E-value=0.28 Score=42.09 Aligned_cols=64 Identities=23% Similarity=0.346 Sum_probs=34.7
Q ss_pred ceeeEEECCCC---Ccc-cCceEEEc-------Cc--eeeEEeCCCeeEEE-ecCCceEEEEEEec----ceeeEEEEEE
Q psy7679 429 GVAGFVKGREG---EGV-AGASIAVE-------GL--GHVVYSAQDGDYWR-LLAPGNYTLHVSAP----GYEPAIHQVS 490 (608)
Q Consensus 429 gI~G~V~D~~g---~pl-~~A~V~i~-------g~--~~~~~Td~~G~f~~-~l~~g~y~l~~s~~----GY~~~~~~v~ 490 (608)
.|+|+|...+| .+. ..+.|-+. .. ..-+.||.+|.|.+ .+.||+|+|.+=.. -|...+..|+
T Consensus 4 ~VsG~l~l~dg~~~~~~~~~~~Vgl~~~~d~~q~~~yqYwt~td~~G~Fti~~V~pGtY~L~ay~~g~~g~~~~~~~~It 83 (95)
T PF14686_consen 4 SVSGRLTLSDGVTNPPAGANAVVGLAPPGDFQQNKGYQYWTRTDSDGNFTIPNVRPGTYRLYAYADGIFGDYKVASDSIT 83 (95)
T ss_dssp EEEEEEE---SS--TT--S-EEEEEE--------SS-EEEEE--TTSEEE---B-SEEEEEEEEE----TTEEEEEEEEE
T ss_pred EEEEEEEEccCcccCccceeEEEEeeeccccccCCCCcEEEEeCCCCcEEeCCeeCcEeEEEEEEecccCceEEecceEE
Confidence 48999886555 333 23445444 11 12467999999988 58999999998663 3555456677
Q ss_pred Ee
Q psy7679 491 VE 492 (608)
Q Consensus 491 v~ 492 (608)
|.
T Consensus 84 V~ 85 (95)
T PF14686_consen 84 VS 85 (95)
T ss_dssp E-
T ss_pred Ec
Confidence 76
No 143
>TIGR02423 protocat_alph protocatechuate 3,4-dioxygenase, alpha subunit. This model represents the alpha chain of protocatechuate 3,4-dioxygenase. The most closely related family outside this family is that of the beta chain (TIGR02422), typically encoded in an adjacent locus. This enzyme acts in the degradation of aromatic compounds by way of p-hydroxybenzoate to succinate and acetyl-CoA.
Probab=94.36 E-value=0.16 Score=49.47 Aligned_cols=47 Identities=23% Similarity=0.307 Sum_probs=36.7
Q ss_pred ceeeEEECCCCCcccCceEEEc------------Cc-------e----eeEEeCCCeeEEE-ecCCceEEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE------------GL-------G----HVVYSAQDGDYWR-LLAPGNYTL 475 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~------------g~-------~----~~~~Td~~G~f~~-~l~~g~y~l 475 (608)
-|+|+|+|.+|+||++|.|-|= .. . ....||.+|.|.+ .+.||.|..
T Consensus 41 ~l~G~V~D~~g~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~~~~f~grGr~~Td~~G~y~f~TI~Pg~Yp~ 111 (193)
T TIGR02423 41 RLEGRVLDGDGHPVPDALIEIWQADAAGRYNSPADLRAPATDPGFRGWGRTGTDESGEFTFETVKPGAVPD 111 (193)
T ss_pred EEEEEEECCCCCCCCCCEEEEEccCCCCccCCccCCcccccCCCCCCeEEEEECCCCCEEEEEEcCCCcCC
Confidence 4899999999999999999982 00 0 1368999999965 688888754
No 144
>smart00634 BID_1 Bacterial Ig-like domain (group 1).
Probab=94.26 E-value=0.18 Score=42.88 Aligned_cols=59 Identities=17% Similarity=0.197 Sum_probs=45.0
Q ss_pred ceeeEEECCCCCcccCceEEEcCce--------eeEEeCCCeeEEEe---cCCceEEEEEEecceeeEEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVEGLG--------HVVYSAQDGDYWRL---LAPGNYTLHVSAPGYEPAIH 487 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~g~~--------~~~~Td~~G~f~~~---l~~g~y~l~~s~~GY~~~~~ 487 (608)
.|+-+|+|++|.|++++.|.+.-.. ....||.+|..... ..+|.++|+++..|+.+...
T Consensus 21 ~i~v~v~D~~Gnpv~~~~V~f~~~~~~~~~~~~~~~~Td~~G~a~~~l~~~~~G~~~vta~~~~~~~~~~ 90 (92)
T smart00634 21 TLTATVTDANGNPVAGQEVTFTTPSGGALTLSKGTATTDANGIATVTLTSTTAGVYTVTASLENGSSSVK 90 (92)
T ss_pred EEEEEEECCCCCCcCCCEEEEEECCCceeeccCCeeeeCCCCEEEEEEECCCCcEEEEEEEECCCcceee
Confidence 4888999999999999998876221 23478999998543 35688999998888766543
No 145
>KOG1948|consensus
Probab=94.09 E-value=0.14 Score=58.71 Aligned_cols=63 Identities=21% Similarity=0.206 Sum_probs=50.1
Q ss_pred cceeeEEEC-CCCCcccCceEEEcCceeeEEeCCCeeEEEe--cCCceEEEEEEecceeeEEEEEEE
Q psy7679 428 RGVAGFVKG-REGEGVAGASIAVEGLGHVVYSAQDGDYWRL--LAPGNYTLHVSAPGYEPAIHQVSV 491 (608)
Q Consensus 428 ~gI~G~V~D-~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~--l~~g~y~l~~s~~GY~~~~~~v~v 491 (608)
..++|+|.+ ..|.||++|.|.|.|.. +..||.+|.|.+. +..|+|+|.+.+.-++=.+..+.+
T Consensus 316 fSvtGRVl~g~~g~~l~gvvvlvngk~-~~kTdaqGyykLen~~t~gtytI~a~kehlqFstv~~kv 381 (1165)
T KOG1948|consen 316 FSVTGRVLVGSKGLPLSGVVVLVNGKS-GGKTDAQGYYKLENLKTDGTYTITAKKEHLQFSTVHAKV 381 (1165)
T ss_pred EEeeeeEEeCCCCCCccceEEEEcCcc-cceEcccceEEeeeeeccCcEEEEEeccceeeeeEEEEe
Confidence 358999999 68999999999997654 6789999999874 677999999987765544444433
No 146
>COG3485 PcaH Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.02 E-value=0.096 Score=51.99 Aligned_cols=50 Identities=22% Similarity=0.313 Sum_probs=38.3
Q ss_pred hcceeeEEECCCCCcccCceEEEc------------Cc----------eeeEEeCCCeeEEE-ecCCceEEEE
Q psy7679 427 HRGVAGFVKGREGEGVAGASIAVE------------GL----------GHVVYSAQDGDYWR-LLAPGNYTLH 476 (608)
Q Consensus 427 ~~gI~G~V~D~~g~pl~~A~V~i~------------g~----------~~~~~Td~~G~f~~-~l~~g~y~l~ 476 (608)
...|+|+|+|.+|.||++|.|.|= ++ ...+.||++|.|.+ .+.||.|-..
T Consensus 72 ~i~l~G~VlD~~G~Pv~~A~VEiWQAda~GrY~~~~d~~~~~~~~f~g~Gr~~Td~~G~y~F~Ti~Pg~yp~~ 144 (226)
T COG3485 72 RILLEGRVLDGNGRPVPDALVEIWQADADGRYSHPKDSRLAPLPNFNGRGRTITDEDGEYRFRTIKPGPYPWR 144 (226)
T ss_pred eEEEEEEEECCCCCCCCCCEEEEEEcCCCCcccCccccccCcCccccceEEEEeCCCceEEEEEeecccccCC
Confidence 346999999999999999999981 11 11468999999965 6888876433
No 147
>cd03464 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4-PCD) , beta subunit. 3,4-PCD catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate. 3,4-PCDs are large aggregates of 12 protomers, each composed of an alpha- and beta-subunit and an Fe3+ ion bound in the beta-subunit at the alpha-subunit-beta-subunit interface. 3,4-PCD is a member of the aromatic dioxygenases which are non-heme iron intradiol-cleaving enzymes that break the C1-C2 bond and utilize Fe3+.
Probab=93.99 E-value=0.21 Score=49.50 Aligned_cols=46 Identities=26% Similarity=0.396 Sum_probs=36.3
Q ss_pred ceeeEEECCCCCcccCceEEEc-----C-------c-----------eeeEEeCCCeeEEE-ecCCceEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE-----G-------L-----------GHVVYSAQDGDYWR-LLAPGNYT 474 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~-----g-------~-----------~~~~~Td~~G~f~~-~l~~g~y~ 474 (608)
-|+|+|+|.+|+||++|.|.|= | . .....||.+|.|.+ .+.||.|.
T Consensus 67 ~l~G~V~D~~G~PV~~A~VEIWQad~~G~Y~~~~d~~~~~~~~~f~grGr~~TD~~G~y~F~TI~Pg~Yp 136 (220)
T cd03464 67 IVHGRVLDEDGRPVPNTLVEIWQANAAGRYRHKRDQHDAPLDPNFGGAGRTLTDDDGYYRFRTIKPGAYP 136 (220)
T ss_pred EEEEEEECCCCCCCCCCEEEEEecCCCCcccCccCCcccccCCCCCCEEEEEECCCccEEEEEECCCCcc
Confidence 4889999999999999999982 1 0 11458999999965 68898874
No 148
>TIGR02422 protocat_beta protocatechuate 3,4-dioxygenase, beta subunit. This model represents the beta chain of protocatechuate 3,4-dioxygenase. The most closely related family outside this family is that of the alpha chain (TIGR02423), typically encoded in an adjacent locus. This enzyme acts in the degradation of aromatic compounds by way of p-hydroxybenzoate to succinate and acetyl-CoA.
Probab=93.70 E-value=0.25 Score=48.99 Aligned_cols=47 Identities=28% Similarity=0.345 Sum_probs=36.6
Q ss_pred ceeeEEECCCCCcccCceEEEc-----C----c--------------eeeEEeCCCeeEEE-ecCCceEEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVE-----G----L--------------GHVVYSAQDGDYWR-LLAPGNYTL 475 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~-----g----~--------------~~~~~Td~~G~f~~-~l~~g~y~l 475 (608)
.|+|+|+|.+|+||++|.|.|= | . .....||.+|.|.+ .+.||.|.+
T Consensus 62 ~l~G~V~D~~g~PV~~A~VEIWQada~G~Y~~~~d~~~~~~~~~f~grGr~~TD~~G~y~F~TI~PG~Y~~ 132 (220)
T TIGR02422 62 IVHGRVLDEDGRPVPNTLVEVWQANAAGRYRHKNDQYLAPLDPNFGGVGRTLTDSDGYYRFRTIKPGPYPW 132 (220)
T ss_pred EEEEEEECCCCCCCCCCEEEEEecCCCCcccCccCccccccCCCCCCEEEEEECCCccEEEEEECCCCccC
Confidence 4889999999999999999982 1 0 11457999999965 688998743
No 149
>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases. This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding
Probab=93.55 E-value=0.12 Score=55.45 Aligned_cols=95 Identities=22% Similarity=0.233 Sum_probs=57.1
Q ss_pred EcccccCC--ceeEEEecCCC-Ccceeeeec--cceEEEecCCCCccccccccccccccccccccCCCHHHHHHHHHHHH
Q psy7679 61 SIGKSVQN--RDLWALQGGGT-NKNKVSIIS--LYRLVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHIT 135 (608)
Q Consensus 61 ~iG~S~eG--R~i~~l~Is~~-~~~~v~~~~--hare~~~~~~~~~~~~~l~~~~~~~~~~~~~~y~~~~~i~~~L~~l~ 135 (608)
.++++..| +.|.+.+|+.. +.+++++.+ |+.||... ..+.++++.|.
T Consensus 4 ~~~~~~~g~~~~ipv~~~~g~~~gp~v~i~agiHGdE~~G~----------------------------~~~~~L~~~l~ 55 (359)
T cd06250 4 PLPSPAPGTERELTVFRFGGAGAGPKVYIQASLHADELPGM----------------------------LVLHHLIELLK 55 (359)
T ss_pred ecccCCCCCeEEEEEEEEeCCCCCCEEEEEeccccCchHHH----------------------------HHHHHHHHHHh
Confidence 45666666 67888888643 357888877 77777632 23445555554
Q ss_pred HhCCCceeeeeccccccCeEEEEEEeeCCCCCccce--eEEeCCCC-CcccccCCCCCCCc
Q psy7679 136 KNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSL--ARFVGRNN-ANGVDLNRNFPDQF 193 (608)
Q Consensus 136 ~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~--~~~~g~~h-a~evdLNRNf~~~w 193 (608)
.... .....|+ ++ ++|..||+|.... -+..++.+ .++.||||.||..=
T Consensus 56 ~~~~--------~~~l~G~-v~-ivP~~Np~g~~~~~~~~~~~R~~p~dg~dlNR~FPg~~ 106 (359)
T cd06250 56 KLEA--------EGRILGE-IT-LVPVANPIGLNQRLGGFHLGRFDLASGTNFNRDFPDLA 106 (359)
T ss_pred hhcc--------ccccCce-EE-EEeCcChHHHHhhccccccccccCCCCCccCcCCCCcc
Confidence 2210 0011343 44 5699999987542 12234444 58999999999753
No 150
>TIGR02962 hdxy_isourate hydroxyisourate hydrolase. Members of this family, hydroxyisourate hydrolase, represent a distinct clade of transthyretin-related proteins. Bacterial members typically are encoded next to ureidoglycolate hydrolase and often near either xanthine dehydrogenase or xanthine/uracil permease genes and have been demonstrated to have hydroxyisourate hydrolase activity. In eukaryotes, a clade separate from the transthyretins (a family of thyroid-hormone binding proteins) has also been shown to have HIU hydrolase activity in urate catabolizing organisms. Transthyretin, then, would appear to be the recently diverged paralog of the more ancient HIUH family.
Probab=91.56 E-value=0.83 Score=40.40 Aligned_cols=55 Identities=24% Similarity=0.298 Sum_probs=43.0
Q ss_pred eeeEEEC-CCCCcccCceEEEcCcee-------eEEeCCCeeEEE------ecCCceEEEEEEecceee
Q psy7679 430 VAGFVKG-REGEGVAGASIAVEGLGH-------VVYSAQDGDYWR------LLAPGNYTLHVSAPGYEP 484 (608)
Q Consensus 430 I~G~V~D-~~g~pl~~A~V~i~g~~~-------~~~Td~~G~f~~------~l~~g~y~l~~s~~GY~~ 484 (608)
|+-.|.| ..|+|.+|+.|.+..... ...||.||...- .+.+|.|+|+|..-.|-.
T Consensus 3 lstHVLDt~~G~PAagv~V~L~~~~~~~~~~i~~~~Tn~DGR~~~~l~~~~~~~~G~Y~l~F~~g~Yf~ 71 (112)
T TIGR02962 3 LSTHVLDTTSGKPAAGVPVTLYRLDGSGWTPLAEGVTNADGRCPDLLPEGETLAAGIYKLRFDTGDYFA 71 (112)
T ss_pred ceEEEEeCCCCccCCCCEEEEEEecCCCeEEEEEEEECCCCCCcCcccCcccCCCeeEEEEEEhhhhhh
Confidence 6778999 889999999999963211 468999999841 246799999998766664
No 151
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=91.45 E-value=0.58 Score=40.27 Aligned_cols=50 Identities=18% Similarity=0.131 Sum_probs=37.1
Q ss_pred ceeeEEEC-CCCCcccCceEEEcC-cee----eEEeCCCeeEEEecCCceEEEEEE
Q psy7679 429 GVAGFVKG-REGEGVAGASIAVEG-LGH----VVYSAQDGDYWRLLAPGNYTLHVS 478 (608)
Q Consensus 429 gI~G~V~D-~~g~pl~~A~V~i~g-~~~----~~~Td~~G~f~~~l~~g~y~l~~s 478 (608)
++.-.|+| .+|+|++||.|.|.+ .+. ..+||.+|...+......+.+.++
T Consensus 14 ~~~v~v~~L~tg~Pv~ga~V~l~~~~~~~~l~~g~TD~~G~a~~~~~~~~~~viA~ 69 (97)
T PF11974_consen 14 GLLVWVTSLSTGKPVAGAEVELYDSRNGQVLASGKTDADGFASFDSTKKPFLVIAR 69 (97)
T ss_pred CEEEEEeeCCCCCccCCCEEEEEECCCCcEeeeeeeCCCceEEecCCCCCEEEEEE
Confidence 35567888 899999999999987 332 468999999887655444555554
No 152
>PF12866 DUF3823: Protein of unknown function (DUF3823); InterPro: IPR024278 This is a family of uncharacterised proteins from Bacteroidetes. These proteins have characteristic DN and DR sequence-motifs but their function is not known.; PDB: 3HN5_B 4EIU_A.
Probab=90.91 E-value=0.93 Score=45.12 Aligned_cols=78 Identities=21% Similarity=0.287 Sum_probs=51.7
Q ss_pred hcceeeEEEC-CCCCccc----CceEEEcCc------eeeEEeCCCeeE-EEecCCceEEEEE-Eecc---eeeEEEEEE
Q psy7679 427 HRGVAGFVKG-REGEGVA----GASIAVEGL------GHVVYSAQDGDY-WRLLAPGNYTLHV-SAPG---YEPAIHQVS 490 (608)
Q Consensus 427 ~~gI~G~V~D-~~g~pl~----~A~V~i~g~------~~~~~Td~~G~f-~~~l~~g~y~l~~-s~~G---Y~~~~~~v~ 490 (608)
..+++|+|.| .+|+||. ++.|.+... ........||.| ...+=.|.|.|++ .--| +...+..+.
T Consensus 21 ~s~l~G~iiD~~tgE~i~~~~~gv~i~l~e~gy~~~~~~~~~v~qDGtf~n~~lF~G~Yki~~~~G~fp~~~~~dti~v~ 100 (222)
T PF12866_consen 21 DSTLTGRIIDVYTGEPIQTDIGGVRIQLYELGYGDNTPQDVYVKQDGTFRNTKLFDGDYKIVPKNGNFPWVVPVDTIEVD 100 (222)
T ss_dssp -EEEEEEEEECCTTEE----STSSEEEEECS-CCG--SEEEEB-TTSEEEEEEE-SEEEEEEE-CTSCSBSCCE--EEEE
T ss_pred CceEEEEEEEeecCCeeeecCCceEEEEEecccccCCCcceEEccCCceeeeeEeccceEEEEcCCCCcccCCCccEEEE
Confidence 3469999999 8888775 567777532 235678999999 5667789999999 6666 666677777
Q ss_pred EecCCcceEEEEEEecc
Q psy7679 491 VENSTKATQLNITLARI 507 (608)
Q Consensus 491 v~~~~~~~~~~i~L~~~ 507 (608)
+. + .++++|...|-
T Consensus 101 i~--G-~t~~d~eVtPY 114 (222)
T PF12866_consen 101 IK--G-NTTQDFEVTPY 114 (222)
T ss_dssp ES--S-CEEEEEEE-BS
T ss_pred ec--C-ceEEeEEeeee
Confidence 75 2 25678877753
No 153
>PF09430 DUF2012: Protein of unknown function (DUF2012); InterPro: IPR019008 This domain is found in different proteins, including uncharacterised protein family UPF0480 and nodal modulators. A nodal modulator has been identified as part of a protein complex that participates in the nodal signaling pathway during vertebrate development [].
Probab=90.20 E-value=1.2 Score=40.18 Aligned_cols=51 Identities=24% Similarity=0.413 Sum_probs=38.7
Q ss_pred ccCceEEEcCcee---eEEeCCCeeEEE-ecCCceEEEEEEecceeeEEEEEEEe
Q psy7679 442 VAGASIAVEGLGH---VVYSAQDGDYWR-LLAPGNYTLHVSAPGYEPAIHQVSVE 492 (608)
Q Consensus 442 l~~A~V~i~g~~~---~~~Td~~G~f~~-~l~~g~y~l~~s~~GY~~~~~~v~v~ 492 (608)
++...|.|.+... .+....||.|.+ .+++|+|.|.+.+..|.=....|+|.
T Consensus 7 ~~~t~V~L~~g~~~~~~~~v~~dG~F~f~~Vp~GsY~L~V~s~~~~F~~~RVdV~ 61 (123)
T PF09430_consen 7 PSSTRVTLNGGQYRPISAFVRSDGSFVFHNVPPGSYLLEVHSPDYVFPPYRVDVS 61 (123)
T ss_pred CCCEEEEEeCCCccceEEEecCCCEEEeCCCCCceEEEEEECCCccccCEEEEEe
Confidence 4567888876655 788999999977 59999999999987765444445554
No 154
>PF10670 DUF4198: Domain of unknown function (DUF4198)
Probab=90.12 E-value=0.71 Score=45.22 Aligned_cols=51 Identities=20% Similarity=0.213 Sum_probs=41.7
Q ss_pred ceeeEEECCCCCcccCceEEEcCc---------eeeEEeCCCeeEEEec-CCceEEEEEEec
Q psy7679 429 GVAGFVKGREGEGVAGASIAVEGL---------GHVVYSAQDGDYWRLL-APGNYTLHVSAP 480 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~g~---------~~~~~Td~~G~f~~~l-~~g~y~l~~s~~ 480 (608)
.++.+|+ -+|+||+++.|.+... .....||.+|.+.+.+ .+|.|.|.+++.
T Consensus 152 ~~~~~vl-~~GkPl~~a~V~~~~~~~~~~~~~~~~~~~TD~~G~~~~~~~~~G~wli~a~~~ 212 (215)
T PF10670_consen 152 PLPFQVL-FDGKPLAGAEVEAFSPGGWYDVEHEAKTLKTDANGRATFTLPRPGLWLIRASHK 212 (215)
T ss_pred EEEEEEE-ECCeEcccEEEEEEECCCccccccceEEEEECCCCEEEEecCCCEEEEEEEEEe
Confidence 3777777 8899999999999643 3458999999998875 689999998764
No 155
>PF10994 DUF2817: Protein of unknown function (DUF2817); InterPro: IPR021259 This family of proteins has no known function.
Probab=89.41 E-value=5.7 Score=42.21 Aligned_cols=117 Identities=21% Similarity=0.154 Sum_probs=63.3
Q ss_pred CCHHHHHHHHHHHHHhCCCceEEEEccc-ccCC--ceeEEEecCCCCcceeeeeccceEEEecCCCCccccccccccccc
Q psy7679 37 LSFDELTKFLVAAAQQNPSKVKLHSIGK-SVQN--RDLWALQGGGTNKNKVSIISLYRLVTVSTTPAPIEEDIKKNKYGF 113 (608)
Q Consensus 37 ~~y~ei~~~l~~la~~~p~~~~~~~iG~-S~eG--R~i~~l~Is~~~~~~v~~~~hare~~~~~~~~~~~~~l~~~~~~~ 113 (608)
.+|+|-.+-+.+.+++....++-+.+.. -.+| --|-+..++....+++++. ++.+..+
T Consensus 3 ~sY~~AR~~Fl~aA~~~ga~~~~~~~p~~G~~ge~L~~Dva~lg~~~a~~lLv~-------~SGtHGV------------ 63 (341)
T PF10994_consen 3 QSYAEARERFLAAAEAAGAKLESYPHPLRGPDGEDLATDVAWLGPKDASRLLVL-------TSGTHGV------------ 63 (341)
T ss_pred ccHHHHHHHHHHHHHHcCCcceeeeCCCCCCCCCcceeEEEEecCCCCCeEEEE-------EecCCcc------------
Confidence 3688888777777776665444333322 2233 3466777776655555553 2211111
Q ss_pred cccccccCCCHHHHHHHHHHH-HHhCCCceeeeeccccccCeEEEEEEeeCCCCCccceeEEeCCCCCcccccCCCCCCC
Q psy7679 114 IIPVQFSHHNYTQMQAELEHI-TKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQ 192 (608)
Q Consensus 114 ~~~~~~~y~~~~~i~~~L~~l-~~~~p~~~~l~~ig~s~~gr~i~~l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~ 192 (608)
+ .|.+..--..+|++. ...-|. +..+. ++=..||=|... .-+.+-+.|||||||-+.
T Consensus 64 ----E-Gf~GSaiQ~~~L~~~~~~~~~~------------~~avl-lVHAlNPyGfa~----~RR~nE~NVDLNRNfldf 121 (341)
T PF10994_consen 64 ----E-GFAGSAIQIALLREDLARSLPA------------GVAVL-LVHALNPYGFAW----LRRVNENNVDLNRNFLDF 121 (341)
T ss_pred ----c-ccccHHHHHHHHHcccccccCC------------CCeEE-EEEccCccccce----eeccCCcCcCcccccCcc
Confidence 0 122333334566653 222232 22232 224568866543 457788999999999966
Q ss_pred cC
Q psy7679 193 FD 194 (608)
Q Consensus 193 w~ 194 (608)
..
T Consensus 122 ~~ 123 (341)
T PF10994_consen 122 SQ 123 (341)
T ss_pred cC
Confidence 54
No 156
>PF09892 DUF2119: Uncharacterized protein conserved in archaea (DUF2119); InterPro: IPR019218 This entry represents a family of hypothetical archaeal proteins of unknown function.
Probab=88.46 E-value=1.4 Score=42.26 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=54.4
Q ss_pred ceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceeeeeeeeeecCCCC-CccC
Q psy7679 170 SLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASYPFDD-SKCL 248 (608)
Q Consensus 170 ~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h~g~ivp~~NpDG-~~~~ 248 (608)
+.-++.||.||+|+. - |..++.-+... ....-.+. ++|+++ +| |..+
T Consensus 7 p~rLFvgGlHG~Egk--------------~-------------t~~iL~~l~~~-~~~~G~l~---i~plv~-~~kYiST 54 (193)
T PF09892_consen 7 PKRLFVGGLHGDEGK--------------D-------------TSPILKRLKPN-DFNNGNLI---IIPLVE-NSKYIST 54 (193)
T ss_pred ceEEEEeeccCcchh--------------h-------------HHHHHHHhCcc-cccCceEE---EEeCCC-CCCceee
Confidence 566789999999998 2 33333433322 22224455 777444 45 5543
Q ss_pred CCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEcccce
Q psy7679 249 GDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDIPFVLSANLHGGSL 309 (608)
Q Consensus 249 ~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~~sepEt~ai~~~~~~~~~~~~~~~Hs~~~ 309 (608)
|+.+| ...++-+.+.++++++++.+++-+|+|..
T Consensus 55 ----------------L~~~Y-----------Y~s~~Gk~il~lIe~y~P~~Y~ElHsY~~ 88 (193)
T PF09892_consen 55 ----------------LDPEY-----------YKSEMGKKILDLIEKYKPEFYFELHSYSK 88 (193)
T ss_pred ----------------cCHHH-----------hcchhhhHHHHHHHHhCCceEEEEeecCH
Confidence 44444 34567889999999999999999999765
No 157
>PF10794 DUF2606: Protein of unknown function (DUF2606); InterPro: IPR019730 This entry represents bacterial proteins with unknown function.
Probab=87.93 E-value=3.7 Score=36.17 Aligned_cols=62 Identities=15% Similarity=0.245 Sum_probs=45.8
Q ss_pred eeeEEECCCCCcccCceEEEcCc---------eee---EEeCCCeeE-EEecCCceEEEEEEecceeeEEEEEEEe
Q psy7679 430 VAGFVKGREGEGVAGASIAVEGL---------GHV---VYSAQDGDY-WRLLAPGNYTLHVSAPGYEPAIHQVSVE 492 (608)
Q Consensus 430 I~G~V~D~~g~pl~~A~V~i~g~---------~~~---~~Td~~G~f-~~~l~~g~y~l~~s~~GY~~~~~~v~v~ 492 (608)
++=-|.|+.|+|+.++.|.|... ..+ ..||.+|++ |.....|.|.|.+..-+ .+.++.+.+.
T Consensus 44 VT~hVen~e~~pi~~~ev~lmKa~ds~~qPs~eig~~IGKTD~~Gki~Wk~~~kG~Y~v~l~n~e-~~~~~~is~v 118 (131)
T PF10794_consen 44 VTFHVENAEGQPIKDFEVTLMKAADSDPQPSKEIGISIGKTDEEGKIIWKNGRKGKYIVFLPNGE-TQETRNISLV 118 (131)
T ss_pred EEEEEecCCCCcccceEEEEEeccccCCCCchhhceeecccCCCCcEEEecCCcceEEEEEcCCC-ceeEEeeeee
Confidence 56678889999999999999751 111 369999999 78888999999987765 2333444444
No 158
>cd06254 M14_ASTE_ASPA_like_4 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=87.43 E-value=0.86 Score=47.30 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=21.7
Q ss_pred EEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcC
Q psy7679 159 LVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFD 194 (608)
Q Consensus 159 l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~ 194 (608)
+.|..||.+.+..... ..-..+.||||+||-...
T Consensus 55 ~vp~~N~~a~~~~~r~--~~~~d~~dlNR~fpg~~~ 88 (288)
T cd06254 55 IVHVLNLSGFYARTPY--IVPEDGKNLNRVFPGDKD 88 (288)
T ss_pred EEeCcCHHHHHhcCcc--cCCCCCCchhhcCCCCCC
Confidence 4589999876432110 012367899999997654
No 159
>cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=87.41 E-value=0.81 Score=47.47 Aligned_cols=31 Identities=26% Similarity=0.148 Sum_probs=22.0
Q ss_pred EEeeCCCCCccceeEEeCCCCCcccccCCCCCCCc
Q psy7679 159 LVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQF 193 (608)
Q Consensus 159 l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w 193 (608)
+.|..||.+.+.. .+....+.||||+||-..
T Consensus 58 ~vp~~Np~a~~~~----~R~~~d~~dlNR~fpg~~ 88 (287)
T cd06251 58 AVPVVNVFGFLNQ----SRYLPDRRDLNRSFPGSK 88 (287)
T ss_pred EEeCCCHHHHHhc----cccCCCccCHhhcCCCCC
Confidence 4589999876543 233346799999999654
No 160
>COG5266 CbiK ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism]
Probab=86.42 E-value=2 Score=43.17 Aligned_cols=53 Identities=23% Similarity=0.289 Sum_probs=39.6
Q ss_pred cceeeEEECCCCCcccCceEEEc-------C----c------eeeEEeCCCeeEEE-ecCCceEEEEEEecc
Q psy7679 428 RGVAGFVKGREGEGVAGASIAVE-------G----L------GHVVYSAQDGDYWR-LLAPGNYTLHVSAPG 481 (608)
Q Consensus 428 ~gI~G~V~D~~g~pl~~A~V~i~-------g----~------~~~~~Td~~G~f~~-~l~~g~y~l~~s~~G 481 (608)
.-++|+|.|. |+||++|+|.+. + + .....||.+|.|.+ .+..|-..+.+-..+
T Consensus 172 e~f~~~vl~~-GkPv~nA~V~v~~~n~~~~d~~a~~~~~ek~~~~~~TD~kG~~~fip~r~G~W~~~~~~~~ 242 (264)
T COG5266 172 EVFRGKVLDN-GKPVPNATVEVEFDNIDTKDNRAKTGNTEKTALVQFTDDKGEVSFIPLRAGVWGFAVEHKT 242 (264)
T ss_pred CeEEEEEEEC-CccCCCcEEEEEEecccccccccccCCCCCcceEEEcCCCceEEEEEccCceEEEEeeccC
Confidence 3488999999 999999999997 1 1 12457999999955 567787766665443
No 161
>PF00576 Transthyretin: HIUase/Transthyretin family; InterPro: IPR023416 This family includes transthyretin that is a thyroid hormone-binding protein that transports thyroxine from the bloodstream to the brain. However, most of the sequences listed in this family do not bind thyroid hormones. They are actually enzymes of the purine catabolism that catalyse the conversion of 5-hydroxyisourate (HIU) to OHCU [, ]. HIU hydrolysis is the original function of the family and is conserved from bacteria to mammals; transthyretins arose by gene duplications in the vertebrate lineage [, ]. HIUases are distinguished in the alignment from the conserved C-terminal YRGS sequence. Transthyretin (formerly prealbumin) is one of 3 thyroid hormone-binding proteins found in the blood of vertebrates []. It is produced in the liver and circulates in the bloodstream, where it binds retinol and thyroxine (T4) []. It differs from the other 2 hormone-binding proteins (T4-binding globulin and albumin) in 3 distinct ways: (1) the gene is expressed at a high rate in the brain choroid plexus; (2) it is enriched in cerebrospinal fluid; and (3) no genetically caused absence has been observed, suggesting an essential role in brain function, distinct from that played in the bloodstream []. The protein consists of around 130 amino acids, which assemble as a homotetramer that contains an internal channel in which T4 is bound. Within this complex, T4 appears to be transported across the blood-brain barrier, where, in the choroid plexus, the hormone stimulates further synthesis of transthyretin. The protein then diffuses back into the bloodstream, where it binds T4 for transport back to the brain [].; PDB: 1TFP_B 1KGJ_D 1IE4_C 1GKE_C 1KGI_D 2H0J_B 2H0E_B 2H0F_B 1ZD6_A 3DGD_D ....
Probab=85.75 E-value=0.91 Score=40.15 Aligned_cols=54 Identities=24% Similarity=0.331 Sum_probs=39.1
Q ss_pred ceeeEEEC-CCCCcccCceEEEcCce--------eeEEeCCCeeEE--E----ecCCceEEEEEEecce
Q psy7679 429 GVAGFVKG-REGEGVAGASIAVEGLG--------HVVYSAQDGDYW--R----LLAPGNYTLHVSAPGY 482 (608)
Q Consensus 429 gI~G~V~D-~~g~pl~~A~V~i~g~~--------~~~~Td~~G~f~--~----~l~~g~y~l~~s~~GY 482 (608)
.|+--|.| ..|.|.+|+.|.+.... ...+||.||... + .+.+|.|+|+|.--.|
T Consensus 2 ~iStHVLDt~~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~~~~~~~~~~~G~Y~l~F~~~~Y 70 (112)
T PF00576_consen 2 PISTHVLDTTTGKPAAGVPVTLYRLDSDGSWTLLAEGVTDADGRIKQPLLEGESLEPGIYKLVFDTGDY 70 (112)
T ss_dssp SEEEEEEETTTTEE-TT-EEEEEEEETTSCEEEEEEEEBETTSEESSTSSETTTS-SEEEEEEEEHHHH
T ss_pred CcEEEEeeCCCCCCccCCEEEEEEecCCCCcEEEEEEEECCCCcccccccccccccceEEEEEEEHHHh
Confidence 36778999 78999999999997544 256899999982 2 2578999999874433
No 162
>PF06488 L_lac_phage_MSP: Lactococcus lactis bacteriophage major structural protein; InterPro: IPR010517 This family consists of several Lactococcus lactis bacteriophage F4-1 major structural proteins []. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=85.20 E-value=1.7 Score=41.99 Aligned_cols=38 Identities=29% Similarity=0.471 Sum_probs=32.0
Q ss_pred eEEeCCCeeEEE--ecCCceEEEEEEecceeeEEEEEEEe
Q psy7679 455 VVYSAQDGDYWR--LLAPGNYTLHVSAPGYEPAIHQVSVE 492 (608)
Q Consensus 455 ~~~Td~~G~f~~--~l~~g~y~l~~s~~GY~~~~~~v~v~ 492 (608)
.++||..|.-.. .|.+|.|++++|+.||...++.+.|+
T Consensus 259 sVITnssG~~vTNgqLsaGtYtVTySAsGY~DVTqtlvVT 298 (301)
T PF06488_consen 259 SVITNSSGNVVTNGQLSAGTYTVTYSASGYADVTQTLVVT 298 (301)
T ss_pred EEEEcCCCcEeecCcccCceEEEEEeccccccccceEEEe
Confidence 457888888744 48899999999999999999888876
No 163
>cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=84.60 E-value=2.3 Score=44.31 Aligned_cols=29 Identities=24% Similarity=0.414 Sum_probs=21.0
Q ss_pred EEeeCCCCCccceeEEeCCCCC-cccccCCCCCC
Q psy7679 159 LVYNDEEGSCNSLARFVGRNNA-NGVDLNRNFPD 191 (608)
Q Consensus 159 l~~~~npdg~~~~~~~~g~~ha-~evdLNRNf~~ 191 (608)
+.|..||.+.... .+.+. ++.||||.||-
T Consensus 62 ~vp~~N~~a~~~~----~R~~p~d~~dlNR~fpg 91 (293)
T cd06255 62 ALPTANPTALDAR----TRMSPFDELDLNRTFPG 91 (293)
T ss_pred EEeCcCHHHHHhh----cccCCCCCCCcccCCCC
Confidence 4589999876543 24444 78999999985
No 164
>KOG1948|consensus
Probab=84.18 E-value=2.6 Score=48.87 Aligned_cols=53 Identities=23% Similarity=0.352 Sum_probs=43.5
Q ss_pred ceeeEEECCCCCcccCceEEEcCce-----eeEEeCCCeeEEEe-cCCce-EEEEEEecc
Q psy7679 429 GVAGFVKGREGEGVAGASIAVEGLG-----HVVYSAQDGDYWRL-LAPGN-YTLHVSAPG 481 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~g~~-----~~~~Td~~G~f~~~-l~~g~-y~l~~s~~G 481 (608)
.+-|+|..-+|+|..|+.|.-.+.+ ..++||++|.|.+. |.||. |.|.++..+
T Consensus 908 SayGtvssLsGdp~~gVaieA~sdn~~~y~eeattdenG~yRiRGL~Pdc~Y~V~vk~~~ 967 (1165)
T KOG1948|consen 908 SAYGTVSSLSGDPMKGVAIEALSDNCDLYQEEATTDENGTYRIRGLLPDCEYQVHVKSYA 967 (1165)
T ss_pred EeeeehhhccCCcccCeEEEEecCCCCccccccccccCCcEEEeccCCCceEEEEEeecc
Confidence 4668888899999999999887554 36899999999764 77766 999998764
No 165
>cd03457 intradiol_dioxygenase_like Intradiol dioxygenase supgroup. Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates. They break the catechol C1-C2 bond and utilize Fe3+, as opposed to the extradiol-cleaving enzymes which break the C2-C3 or C1-C6 bond and utilize Fe2+ and Mn+. The family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases. The specific function of this subgroup is unknown.
Probab=82.31 E-value=2.5 Score=40.97 Aligned_cols=46 Identities=17% Similarity=0.029 Sum_probs=33.4
Q ss_pred ceeeEEEC-CCCCcccCceEEEc------------Cc-------------eeeEEeCCCeeEEE-ecCCceEE
Q psy7679 429 GVAGFVKG-REGEGVAGASIAVE------------GL-------------GHVVYSAQDGDYWR-LLAPGNYT 474 (608)
Q Consensus 429 gI~G~V~D-~~g~pl~~A~V~i~------------g~-------------~~~~~Td~~G~f~~-~l~~g~y~ 474 (608)
.|.|+|+| .+++||++|.|.|= +. .....||.+|.|.+ .+.||-|.
T Consensus 28 ~l~g~V~D~~~c~Pv~~a~VdiWh~da~G~Ys~~~~~~~~~~~~~~~~flRG~~~TD~~G~~~F~TI~PG~Y~ 100 (188)
T cd03457 28 TLDLQVVDVATCCPPPNAAVDIWHCDATGVYSGYSAGGGGGEDTDDETFLRGVQPTDADGVVTFTTIFPGWYP 100 (188)
T ss_pred EEEEEEEeCCCCccCCCeEEEEecCCCCCCCCCccCCccccccccCCCcCEEEEEECCCccEEEEEECCCCCC
Confidence 37889999 57889999888871 00 01357899999965 58888775
No 166
>cd05469 Transthyretin_like Transthyretin_like. This domain is present in the transthyretin-like protein (TLP) family which includes transthyretin (TTR) and a transthyretin-related protein called 5-hydroxyisourate hydrolase (HIUase). TTR and HIUase are homotetrameric proteins with each subunit consisting of eight beta-strands arranged in two sheets and a short alpha-helix. The central channel of the tetramer contains two independent binding sites, each located between a pair of subunits. TTR transports thyroid hormones and retinol in the blood serum of vertebrates while HIUase catalyzes the second step in a three-step ureide pathway. TTRs are highly conserved and found only in vertebrates while the HIUases are found in a wide range of bacterial, plant, fungal, slime mold and vertebrate organisms.
Probab=80.27 E-value=8.1 Score=34.21 Aligned_cols=55 Identities=18% Similarity=0.174 Sum_probs=41.8
Q ss_pred eeeEEEC-CCCCcccCceEEEcCce--------eeEEeCCCeeEEE-----ecCCceEEEEEEecceee
Q psy7679 430 VAGFVKG-REGEGVAGASIAVEGLG--------HVVYSAQDGDYWR-----LLAPGNYTLHVSAPGYEP 484 (608)
Q Consensus 430 I~G~V~D-~~g~pl~~A~V~i~g~~--------~~~~Td~~G~f~~-----~l~~g~y~l~~s~~GY~~ 484 (608)
|+--|.| ..|.|-+|+.|.+.-.. ...+||.||...- .+.+|.|+|+|.--.|-.
T Consensus 3 lStHVLDt~~G~PAagv~V~L~~~~~~~~w~~l~~~~Tn~DGR~~~~l~~~~~~~G~Y~l~F~t~~Yf~ 71 (113)
T cd05469 3 LMVKVLDAVRGSPAANVAIKVFRKTADGSWEIFATGKTNEDGELHGLITEEEFXAGVYRVEFDTKSYWK 71 (113)
T ss_pred ceEEEEeCCCCccCCCCEEEEEEecCCCceEEEEEEEECCCCCccCccccccccceEEEEEEehHHhHh
Confidence 6677999 78999999999996321 2468999999832 256799999997665654
No 167
>cd05822 TLP_HIUase HIUase (5-hydroxyisourate hydrolase) catalyzes the second step in a three-step ureide pathway in which 5-hydroxyisourate (HIU), a product of the uricase (urate oxidase) reaction, is hydrolyzed to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU). HIUase has high sequence similarity with transthyretins and is a member of the transthyretin-like protein (TLP) family. HIUase is distinguished from transthyretins by a conserved signature motif at its C-terminus that forms part of the active site. In HIUase, this motif is YRGS, while transthyretins have a conserved TAVV sequence in the same location. Most HIUases are cytosolic but in plants and slime molds, they are peroxisomal based on the presence of N-terminal periplasmic localization sequences. HIUase forms a homotetramer with each subunit consisting of eight beta-strands arranged in two sheets and a short alpha-helix. The central channel of the tetramer contains two independent binding sites, each located betw
Probab=79.02 E-value=3.1 Score=36.78 Aligned_cols=56 Identities=23% Similarity=0.312 Sum_probs=43.1
Q ss_pred ceeeEEEC-CCCCcccCceEEEcCce-------eeEEeCCCeeEEE------ecCCceEEEEEEecceee
Q psy7679 429 GVAGFVKG-REGEGVAGASIAVEGLG-------HVVYSAQDGDYWR------LLAPGNYTLHVSAPGYEP 484 (608)
Q Consensus 429 gI~G~V~D-~~g~pl~~A~V~i~g~~-------~~~~Td~~G~f~~------~l~~g~y~l~~s~~GY~~ 484 (608)
.|+--|.| ..|.|-+|+.|.+.-.. ....||.||.... .+.+|.|+|+|.--.|-.
T Consensus 2 ~lstHVLDt~~G~PAagv~V~L~~~~~~~~~~i~~~~Td~DGR~~~~~~~~~~~~~G~Y~l~F~~~~Yf~ 71 (112)
T cd05822 2 PLSTHVLDTATGKPAAGVAVTLYRLDGNGWTLLATGVTNADGRCDDLLPPGAQLAAGTYKLTFDTGAYFA 71 (112)
T ss_pred CceeEEEeCCCCcccCCCEEEEEEecCCCeEEEEEEEECCCCCccCcccccccCCCeeEEEEEEhhhhhh
Confidence 36678999 78999999999997421 1468999999832 256799999998766654
No 168
>COG1470 Predicted membrane protein [Function unknown]
Probab=77.46 E-value=8.3 Score=42.06 Aligned_cols=73 Identities=18% Similarity=0.329 Sum_probs=57.1
Q ss_pred ceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCceEEEEEEecc-eeeEEEEEEEecCCcceEEEEEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPG-YEPAIHQVSVENSTKATQLNITL 504 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~s~~G-Y~~~~~~v~v~~~~~~~~~~i~L 504 (608)
...-++.|.+|.+++.|-|... +....|+..|+=.+.+.||.|.+.+...| |+...+.+.+. .+....+.+.+
T Consensus 188 ~~~l~~vd~~G~gv~~~~v~~g--~e~~ets~~g~~~~e~t~g~y~~~i~~~g~ye~~~~av~l~-d~~t~dLkls~ 261 (513)
T COG1470 188 QSKLRLVDDDGAGVPKALVKDG--NESFETSSKGNLEVEITPGKYVVLIAKKGIYEKKKRAVKLN-DGETKDLKLSV 261 (513)
T ss_pred eEEEEEEccCCCccchheeecC--ceeEEeecccceeEEecCcceEEEeccccceecceEEEEcC-CCcccceeEEE
Confidence 3566899999999999988774 34567888998888899999999999999 88888888876 55444444443
No 169
>PF01190 Pollen_Ole_e_I: Pollen proteins Ole e I like; InterPro: IPR006041 Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Ole e 1. A number of plant pollen proteins, whose biological function is not yet known, are structurally related []. These proteins are most probably secreted and consist of about 145 residues. There are six cysteines which are conserved in the sequence of these proteins. They seem to be involved in disulphide bonds.
Probab=76.75 E-value=5.1 Score=34.23 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=26.2
Q ss_pred CCCcccCceEEEcCce--------eeEEeCCCeeEEEecCC
Q psy7679 438 EGEGVAGASIAVEGLG--------HVVYSAQDGDYWRLLAP 470 (608)
Q Consensus 438 ~g~pl~~A~V~i~g~~--------~~~~Td~~G~f~~~l~~ 470 (608)
...||+||.|.|.-.. ...+||.+|.|.+.++.
T Consensus 17 ~~~~l~GA~V~v~C~~~~~~~~~~~~~~Td~~G~F~i~l~~ 57 (97)
T PF01190_consen 17 AAKPLPGAKVSVECKDGNGGVVFSAEAKTDENGYFSIELPS 57 (97)
T ss_pred cCccCCCCEEEEECCCCCCCcEEEEEEEeCCCCEEEEEecC
Confidence 3579999999998433 25689999999988754
No 170
>cd05821 TLP_Transthyretin Transthyretin (TTR) is a 55 kDa protein responsible for the transport of thyroid hormones and retinol in vertebrates. TTR distributes the two thyroid hormones T3 (3,5,3'-triiodo-L-thyronine) and T4 (Thyroxin, or 3,5,3',5'-tetraiodo-L-thyronine), as well as retinol (vitamin A) through the formation of a macromolecular complex that includes each of these as well as retinol-binding protein. Misfolded forms of TTR are implicated in the amyloid diseases familial amyloidotic polyneuropathy and senile systemic amyloidosis. TTR forms a homotetramer with each subunit consisting of eight beta-strands arranged in two sheets and a short alpha-helix. The central channel of the tetramer contains two independent binding sites, each located between a pair of subunits, which differ in their ligand binding affinity. A negative cooperativity has been observed for the binding of T4 and other TTR ligands. A fraction of plasma TTR is carried in high density lipoproteins by bindi
Probab=76.07 E-value=4.3 Score=36.35 Aligned_cols=56 Identities=14% Similarity=0.140 Sum_probs=43.2
Q ss_pred ceeeEEEC-CCCCcccCceEEEcCce--------eeEEeCCCeeEE--E---ecCCceEEEEEEecceee
Q psy7679 429 GVAGFVKG-REGEGVAGASIAVEGLG--------HVVYSAQDGDYW--R---LLAPGNYTLHVSAPGYEP 484 (608)
Q Consensus 429 gI~G~V~D-~~g~pl~~A~V~i~g~~--------~~~~Td~~G~f~--~---~l~~g~y~l~~s~~GY~~ 484 (608)
.|+--|.| ..|.|-+|+.|.+.... ....||.||... + .+.+|.|+|+|.--.|-.
T Consensus 8 ~ittHVLDt~~G~PAaGV~V~L~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~l~F~tg~Yf~ 77 (121)
T cd05821 8 PLMVKVLDAVRGSPAANVAVKVFKKTADGSWEPFASGKTTETGEIHGLTTDEQFTEGVYKVEFDTKAYWK 77 (121)
T ss_pred CcEEEEEECCCCccCCCCEEEEEEecCCCceEEEEEEEECCCCCCCCccCccccCCeeEEEEEehhHhhh
Confidence 47788999 88999999999995321 246899999983 2 245799999997666654
No 171
>cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=75.35 E-value=5.2 Score=42.12 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=20.7
Q ss_pred EEeeCCCCCccceeEEeCCCCC-cccccCCCCCCCc
Q psy7679 159 LVYNDEEGSCNSLARFVGRNNA-NGVDLNRNFPDQF 193 (608)
Q Consensus 159 l~~~~npdg~~~~~~~~g~~ha-~evdLNRNf~~~w 193 (608)
+.|..||.+.+.. .+... .+.||||.||-..
T Consensus 72 ~vP~~Np~a~~~~----~R~~p~D~~DLNR~Fpg~~ 103 (316)
T cd06252 72 ILPALNFPAVQAG----TRTSPIDGGNLNRVFPGDP 103 (316)
T ss_pred EEeCCCHHHHHhc----cccCCCCCCcHHhhCCCCC
Confidence 4588998766432 23332 4689999999754
No 172
>smart00095 TR_THY Transthyretin.
Probab=74.86 E-value=5 Score=35.96 Aligned_cols=56 Identities=13% Similarity=0.112 Sum_probs=42.4
Q ss_pred ceeeEEEC-CCCCcccCceEEEcCce--------eeEEeCCCeeEE--E---ecCCceEEEEEEecceee
Q psy7679 429 GVAGFVKG-REGEGVAGASIAVEGLG--------HVVYSAQDGDYW--R---LLAPGNYTLHVSAPGYEP 484 (608)
Q Consensus 429 gI~G~V~D-~~g~pl~~A~V~i~g~~--------~~~~Td~~G~f~--~---~l~~g~y~l~~s~~GY~~ 484 (608)
.|+--|.| ..|.|-+|+.|.+.... ....||.||... + .+.+|.|+|+|.--.|-.
T Consensus 5 plTtHVLDt~~G~PAagv~V~L~~~~~~~~w~~la~~~Tn~DGR~~~ll~~~~~~~G~Y~l~F~tg~Yf~ 74 (121)
T smart00095 5 PLMVKVLDAVRGSPAVNVAVKVFKKTEEGTWEPFASGKTNESGEIHELTTDEKFVEGLYKVEFDTKSYWK 74 (121)
T ss_pred CeEEEEEECCCCccCCCCEEEEEEeCCCCceEEEEEEecCCCccccCccCcccccceEEEEEEehhHhHh
Confidence 47788999 88999999999995321 146899999983 2 246799999997555544
No 173
>KOG3006|consensus
Probab=74.23 E-value=22 Score=31.52 Aligned_cols=51 Identities=24% Similarity=0.437 Sum_probs=39.1
Q ss_pred ceeeEEEC-CCCCcccCceEEEcCce-------e-eEEeCCCeeE-EE----ecCCceEEEEEEe
Q psy7679 429 GVAGFVKG-REGEGVAGASIAVEGLG-------H-VVYSAQDGDY-WR----LLAPGNYTLHVSA 479 (608)
Q Consensus 429 gI~G~V~D-~~g~pl~~A~V~i~g~~-------~-~~~Td~~G~f-~~----~l~~g~y~l~~s~ 479 (608)
.|.-.|.| ..|.|-.|+.|.+.-.. . ...|+++|+- +. .+.||.|++.+--
T Consensus 22 ~itahVLd~s~GsPA~gVqV~~f~~~~~~~w~~igs~~T~~nGrv~~~~~~~tl~~GtYr~~~dT 86 (132)
T KOG3006|consen 22 PITAHVLDISRGSPAAGVQVHLFILANDDTWTPIGSGFTQDNGRVDWVSPDFTLIPGTYRLVFDT 86 (132)
T ss_pred CcEeEEeecccCCcccceEEEEEEecCCCcccCccccccccCceeecccchhhhccceEEEEEec
Confidence 48899999 78999999999885211 1 3478999997 33 3789999999853
No 174
>PF03785 Peptidase_C25_C: Peptidase family C25, C terminal ig-like domain; InterPro: IPR005536 This domain is found in almost all members of MEROPS peptidase family C25, (clan CD). Peptidase family C25 is a protein family found in the bacteria Porphyromonas gingivalis (Bacteroides gingivalis) a Gram-negative anaerobic bacterial species strongly associated with adult periodontitis. One of its distinguishing characteristics and putative virulence properties is the ability to agglutinate erythrocytes []. It is a highly proteolytic organism which metabolises small peptides and amino acids. Indirect evidence suggests that the proteases produced by this microorganism constitute an important virulence factor []. Protease-encoding genes have been shown to contain multiple copies of repeated nucleotide sequences. These conserved sequences have also been found in haemagglutinin genes [].; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 1CVR_A.
Probab=70.03 E-value=20 Score=29.63 Aligned_cols=48 Identities=25% Similarity=0.270 Sum_probs=29.7
Q ss_pred cCceEEEc--Cceee-EEeCCCeeEEEecC-----CceEEEEEEecceeeEEEEEEE
Q psy7679 443 AGASIAVE--GLGHV-VYSAQDGDYWRLLA-----PGNYTLHVSAPGYEPAIHQVSV 491 (608)
Q Consensus 443 ~~A~V~i~--g~~~~-~~Td~~G~f~~~l~-----~g~y~l~~s~~GY~~~~~~v~v 491 (608)
+|+.|.|. |.-.+ .+++ .|.+.+.+. +|.|+|++....|.+..++|.+
T Consensus 26 ~gs~ValS~dg~l~G~ai~~-sG~ati~l~~~it~~~~~tlTit~~n~~t~i~~i~V 81 (81)
T PF03785_consen 26 PGSYVALSQDGDLYGKAIVN-SGNATINLTNPITDEGTLTLTITAFNYVTYIKTIQV 81 (81)
T ss_dssp TT-EEEEEETTEEEEEEE-B-TTEEEEE-SS--TT-SEEEEEEE-TTB--EEEEEEE
T ss_pred CCcEEEEecCCEEEEEEEec-CceEEEECCcccCCCceEEEEEEEEccEEEEEEeeC
Confidence 55666664 33333 4667 999987655 5889999999999998887764
No 175
>COG2351 Transthyretin-like protein [General function prediction only]
Probab=67.97 E-value=11 Score=33.38 Aligned_cols=55 Identities=25% Similarity=0.304 Sum_probs=42.2
Q ss_pred eeeEEEC-CCCCcccCceEEEcCce-------eeEEeCCCeeEE--E----ecCCceEEEEEEecceee
Q psy7679 430 VAGFVKG-REGEGVAGASIAVEGLG-------HVVYSAQDGDYW--R----LLAPGNYTLHVSAPGYEP 484 (608)
Q Consensus 430 I~G~V~D-~~g~pl~~A~V~i~g~~-------~~~~Td~~G~f~--~----~l~~g~y~l~~s~~GY~~ 484 (608)
++--|.| ..|+|-+++.|.+.-.. ..+.||.||.-. + .+..|.|+++|..-.|-.
T Consensus 11 LTTHVLDta~GkPAagv~V~L~rl~~~~~~~l~t~~Tn~DGR~d~pll~g~~~~~G~Y~l~F~~gdYf~ 79 (124)
T COG2351 11 LTTHVLDTASGKPAAGVKVELYRLEGNQWELLKTVVTNADGRIDAPLLAGETLATGIYELVFHTGDYFK 79 (124)
T ss_pred eeeeeeecccCCcCCCCEEEEEEecCCcceeeeEEEecCCCcccccccCccccccceEEEEEEcchhhh
Confidence 6778999 88999999999986322 157899999974 2 257799999997655544
No 176
>cd06230 M14_ASTE_ASPA_like The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=62.03 E-value=9.9 Score=38.53 Aligned_cols=57 Identities=23% Similarity=0.123 Sum_probs=32.7
Q ss_pred EEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcCCceeeceee
Q psy7679 159 LVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLH 232 (608)
Q Consensus 159 l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~~~l~~~~~h 232 (608)
+.|..||+|.+... +. ...||||+||..-.. + . ..+..+.++.+.+... ....+++|
T Consensus 37 ~vp~~N~~g~~~~~----R~--~~~DLNR~fpg~~~~---~-~------~~~~~a~~l~~~i~~~-~d~~iDlH 93 (252)
T cd06230 37 LVPAANPLALEAGQ----RY--LDRDLNRIFPGDPDS---G-T------YEDRLAAELCPELEGL-ADAVLDLH 93 (252)
T ss_pred EEeCcCHHHHHhCC----CC--CCcCCCCCCCCCCCC---C-C------HHHHHHHHHHHHHhhh-ccEEEECC
Confidence 45889999876531 11 229999999964320 1 0 1233355565555432 44566777
No 177
>PF11008 DUF2846: Protein of unknown function (DUF2846); InterPro: IPR022548 Some members in this group of proteins with unknown function are annotated as lipoproteins. However this cannot be confirmed.
Probab=61.82 E-value=46 Score=29.39 Aligned_cols=60 Identities=17% Similarity=0.162 Sum_probs=38.7
Q ss_pred ccCceEEEcCceeeEEeCCCeeEEEecCCceEEEEEEeccee---eEEEEEEEecCCcceEEEEE
Q psy7679 442 VAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPGYE---PAIHQVSVENSTKATQLNIT 503 (608)
Q Consensus 442 l~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~s~~GY~---~~~~~v~v~~~~~~~~~~i~ 503 (608)
...-.|.|.|...+. +...+.|+..++||.|+|.++..... ....++++. .++..-+...
T Consensus 40 ~~~~~v~vdg~~ig~-l~~g~y~~~~v~pG~h~i~~~~~~~~~~~~~~l~~~~~-~G~~yy~r~~ 102 (117)
T PF11008_consen 40 AVKPDVYVDGELIGE-LKNGGYFYVEVPPGKHTISAKSEFSSSPGANSLDVTVE-AGKTYYVRQD 102 (117)
T ss_pred cccceEEECCEEEEE-eCCCeEEEEEECCCcEEEEEecCccCCCCccEEEEEEc-CCCEEEEEEE
Confidence 344677887766554 56666668899999999999655332 255566666 5655444433
No 178
>PF07523 Big_3: Bacterial Ig-like domain (group 3); InterPro: IPR011080 This entry represents bacterial domains with an Ig-like fold. These domains are found in a variety of bacterial surface proteins.; PDB: 2L7Y_A 2KPN_A.
Probab=61.05 E-value=21 Score=28.12 Aligned_cols=48 Identities=21% Similarity=0.262 Sum_probs=28.4
Q ss_pred ceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCCceEEEEEEecceeeEEEEE
Q psy7679 429 GVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAIHQV 489 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~s~~GY~~~~~~v 489 (608)
++.-.++|++|.+|+...+.|.+ ..-.-.+|.|.|.+++.| .+.+..|
T Consensus 18 ~~~v~at~~dG~~~~~~~~~vs~------------~~d~~~~G~y~Vt~~y~~-~t~t~~V 65 (67)
T PF07523_consen 18 GLFVTATYSDGTSLPLSDVTVSG------------TVDTSKAGTYTVTYTYKG-VTATFTV 65 (67)
T ss_dssp CHEEEEEETTS-ES-GCCSEEES---------------TTS-CCEEEEEEECT-EEEEEEE
T ss_pred CCEEEEEEcCCCEeceeeeEEEe------------eeecCCCceEEEEEEECC-EEEEEEE
Confidence 45566777888876666666654 111236899999999999 3333333
No 179
>KOG4659|consensus
Probab=59.47 E-value=29 Score=42.48 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=71.4
Q ss_pred hHHHhhcceeeEEECCCCCcccCceEEEcCcee-eEEeCCCeeEEEecCC-ceEEEEEEecceeeEEEEEEEecCCcceE
Q psy7679 422 YIEQVHRGVAGFVKGREGEGVAGASIAVEGLGH-VVYSAQDGDYWRLLAP-GNYTLHVSAPGYEPAIHQVSVENSTKATQ 499 (608)
Q Consensus 422 ~~eqv~~gI~G~V~D~~g~pl~~A~V~i~g~~~-~~~Td~~G~f~~~l~~-g~y~l~~s~~GY~~~~~~v~v~~~~~~~~ 499 (608)
|-+.-..-|.|+|.-..|.||-|++|+-.-... -|.|-+||.|-+.+.- +..+|.|--.-|.++++.|-++ -++...
T Consensus 46 fne~~~~vIrgrvv~~~~~pLVGVrVS~~~~~~yfTlTR~DG~FDL~vnGg~svtLqF~R~pF~~qkr~v~vp-wnq~i~ 124 (1899)
T KOG4659|consen 46 FNENRISVIRGRVVWGGGVPLVGVRVSDAAHPLYFTLTREDGYFDLTVNGGRSVTLQFLRTPFQSQKRSVFVP-WNQIIH 124 (1899)
T ss_pred hccccceEEeccEeecCCcceEEEEeecccccceEEEEecCceEEEEEcccceEEEEEccCCCcccceeEEeC-hhhEEE
Confidence 333333458999998889999999998753322 5789999999776544 5588888888899999999887 666665
Q ss_pred E-EEEEeccccc-------ccccCCCCCccccee
Q psy7679 500 L-NITLARINLI-------AWSHQHDFSITDNIE 525 (608)
Q Consensus 500 ~-~i~L~~~~~~-------~~~~~~~~~l~evvv 525 (608)
+ +++|...... +--.+..|.+-++||
T Consensus 125 id~vvm~~~~~~~~~~~~~~~C~~~~~~~pdpvv 158 (1899)
T KOG4659|consen 125 IDDVVMYRQEGGSPPAPARAKCSPTLRRIPDPVV 158 (1899)
T ss_pred EEeEEEEeecCCCCCCCCCCccChhhccCCCcEE
Confidence 5 4556544322 111225677777655
No 180
>PF14347 DUF4399: Domain of unknown function (DUF4399)
Probab=58.96 E-value=32 Score=28.94 Aligned_cols=52 Identities=21% Similarity=0.221 Sum_probs=35.9
Q ss_pred ceeeEEECCCCCcccCceEEEcCceeeEEeCCCee--EEEecCCceEEEEEEeccee
Q psy7679 429 GVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGD--YWRLLAPGNYTLHVSAPGYE 483 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~--f~~~l~~g~y~l~~s~~GY~ 483 (608)
+-.=.+.|..+.|+++..|......... .+|. ..+.|+||+|+|++.+-.+.
T Consensus 21 gh~hlliD~~~~~~~~~~I~~~~n~vhy---~~Gqte~~I~L~PG~htLtl~~~d~~ 74 (87)
T PF14347_consen 21 GHHHLLIDGDGPPLANEPIPFNINGVHY---GKGQTELNIELPPGKHTLTLQLGDGD 74 (87)
T ss_pred ccEEEEECCCCCcCCCCeeeecCCeEEe---CCCEEEEEEEeCCCCEEEEEEeCCCC
Confidence 3445788988889999888875332222 4444 35679999999999875544
No 181
>TIGR02994 ectoine_eutE ectoine utilization protein EutE. Members of this family, part of the succinylglutamate desuccinylase / aspartoacylase family (pfam04952), belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it the operon is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida.
Probab=58.63 E-value=19 Score=38.08 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=18.8
Q ss_pred EEeeCCCCCccceeEEeCCC-CCcccccCCCCCCC
Q psy7679 159 LVYNDEEGSCNSLARFVGRN-NANGVDLNRNFPDQ 192 (608)
Q Consensus 159 l~~~~npdg~~~~~~~~g~~-ha~evdLNRNf~~~ 192 (608)
++|..||-|.... .+. -..+.||||.||-.
T Consensus 85 ~vP~~N~~g~~~~----~r~~p~d~~nlNR~fPG~ 115 (325)
T TIGR02994 85 IVPAMNYPAFRAG----TRTSPIDRGNLNRSFPGR 115 (325)
T ss_pred EEcCCCHHHHHhh----CCCCCCCCCccCCCCCCC
Confidence 4599998654322 111 12567999999854
No 182
>COG4073 Uncharacterized protein conserved in archaea [Function unknown]
Probab=58.27 E-value=30 Score=32.55 Aligned_cols=28 Identities=7% Similarity=-0.045 Sum_probs=23.7
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEEcccce
Q psy7679 282 PEPETLAVEKWLQDIPFVLSANLHGGSL 309 (608)
Q Consensus 282 sepEt~ai~~~~~~~~~~~~~~~Hs~~~ 309 (608)
..++-+.+.+.++++++..++-+|+|..
T Consensus 68 ~s~~G~~ilr~vek~rP~vY~ElH~Yr~ 95 (198)
T COG4073 68 RSEVGARILRVVEKLRPDVYVELHCYRP 95 (198)
T ss_pred cchhhHHHHHHHHHhCCceEEEEeecCH
Confidence 4467788899999999999999998653
No 183
>PF10577 UPF0560: Uncharacterised protein family UPF0560; InterPro: IPR018890 This family of proteins has no known function.
Probab=57.52 E-value=21 Score=41.56 Aligned_cols=59 Identities=20% Similarity=0.190 Sum_probs=47.3
Q ss_pred eeeEEEC-CCCCcccCceEEEcCcee---eEEeCCCeeEEEec--CCce-EEEEEEecceeeEEEE
Q psy7679 430 VAGFVKG-REGEGVAGASIAVEGLGH---VVYSAQDGDYWRLL--APGN-YTLHVSAPGYEPAIHQ 488 (608)
Q Consensus 430 I~G~V~D-~~g~pl~~A~V~i~g~~~---~~~Td~~G~f~~~l--~~g~-y~l~~s~~GY~~~~~~ 488 (608)
||-.|.| .+-+||++|.|.|.+... ..+|+.||.-.+.+ ..|. .+|++++-||.+....
T Consensus 3 lKV~V~d~~t~qpl~~A~V~V~~N~t~~~s~~t~~dG~~~l~~~yrlg~~l~v~a~k~gyv~ns~P 68 (807)
T PF10577_consen 3 LKVQVSDASTRQPLSDASVEVFGNQTLTASGTTGNDGVVLLKFPYRLGTWLIVTASKDGYVPNSVP 68 (807)
T ss_pred EEEEEecccCcccCCCCeEEEEeceeEeecceecCCceEEEEEeccCCCeEEEEEecCCccCCCCC
Confidence 7888999 788999999999987543 45789999876553 4566 7888999999987654
No 184
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=56.45 E-value=15 Score=30.24 Aligned_cols=30 Identities=10% Similarity=0.074 Sum_probs=23.1
Q ss_pred CCCcccCceEEEcCcee--------eEEeCCCeeEEEe
Q psy7679 438 EGEGVAGASIAVEGLGH--------VVYSAQDGDYWRL 467 (608)
Q Consensus 438 ~g~pl~~A~V~i~g~~~--------~~~Td~~G~f~~~ 467 (608)
.|+|++++.|.|..... .+.||.+|.|.+.
T Consensus 7 ~~~P~~~~~V~L~e~d~~~~Ddll~~~~Td~~G~F~l~ 44 (80)
T PF01060_consen 7 GGKPAKNVKVKLWEDDYFDPDDLLDETKTDSDGNFELS 44 (80)
T ss_pred CCccCCCCEEEEEECCCCCCCceeEEEEECCCceEEEE
Confidence 37899999998864332 5789999999775
No 185
>PF13953 PapC_C: PapC C-terminal domain; PDB: 3L48_E 2XET_A 3RFZ_E 2KT6_A.
Probab=53.80 E-value=28 Score=27.58 Aligned_cols=45 Identities=24% Similarity=0.249 Sum_probs=24.3
Q ss_pred EEECCCCCcccC-ceEEEcCceeeEEeCCCeeEEEecCCceEEEEE
Q psy7679 433 FVKGREGEGVAG-ASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHV 477 (608)
Q Consensus 433 ~V~D~~g~pl~~-A~V~i~g~~~~~~Td~~G~f~~~l~~g~y~l~~ 477 (608)
++++.+|+|||. |.|...+.....+...+|.-++...+..-+|.+
T Consensus 2 ~l~~~~G~~lPfGA~v~~~~g~~~g~Vg~~G~vyl~~~~~~~~L~V 47 (68)
T PF13953_consen 2 TLRDADGKPLPFGASVSDEDGNNIGIVGQDGQVYLSGLPPKGTLTV 47 (68)
T ss_dssp EEEETTSEE--TT-EEEETTSSEEEEB-GCGEEEEEEE-TCEEEEE
T ss_pred EEEcCCCCcCCCCcEEEcCCCCEEEEEcCCCEEEEECCCCCcEEEE
Confidence 578899999985 666655444456667778766543333333444
No 186
>cd06253 M14_ASTE_ASPA_like_3 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=51.95 E-value=32 Score=35.86 Aligned_cols=32 Identities=22% Similarity=0.180 Sum_probs=20.6
Q ss_pred EEEEEeeCCCCCccceeEEeCCCC-CcccccCCCCCCC
Q psy7679 156 LWVLVYNDEEGSCNSLARFVGRNN-ANGVDLNRNFPDQ 192 (608)
Q Consensus 156 i~~l~~~~npdg~~~~~~~~g~~h-a~evdLNRNf~~~ 192 (608)
++ +.|..||.+.... .+.. ..+.||||.||-.
T Consensus 61 v~-~vP~~N~~a~~~~----~R~~p~d~~dlNR~Fpg~ 93 (298)
T cd06253 61 VD-VIPSVNPLGLNLG----TRFWPTDNSDINRMFPGD 93 (298)
T ss_pred EE-EEeCcCHHHHHHh----hCcCCCCCCcccccCCCC
Confidence 44 4588998764432 2222 2578999999964
No 187
>PF01835 A2M_N: MG2 domain; InterPro: IPR002890 The proteinase-binding alpha-macroglobulins (A2M) [] are large glycoproteins found in the plasma of vertebrates, in the hemolymph of some invertebrates and in reptilian and avian egg white. A2M-like proteins are able to inhibit all four classes of proteinases by a 'trapping' mechanism. They have a peptide stretch, called the 'bait region', which contains specific cleavage sites for different proteinases. When a proteinase cleaves the bait region, a conformational change is induced in the protein, thus trapping the proteinase. The entrapped enzyme remains active against low molecular weight substrates, whilst its activity toward larger substrates is greatly reduced, due to steric hindrance. Following cleavage in the bait region, a thiol ester bond, formed between the side chains of a cysteine and a glutamine, is cleaved and mediates the covalent binding of the A2M-like protein to the proteinase. This family includes the N-terminal region of the alpha-2-macroglobulin family. The inhibitor domains belong to MEROPS inhibitor family I39.; GO: 0004866 endopeptidase inhibitor activity; PDB: 2B39_B 3KLS_B 3PRX_C 3KM9_B 3PVM_C 3CU7_A 4E0S_A 4A5W_A 4ACQ_C 2P9R_B ....
Probab=46.91 E-value=1.4e+02 Score=25.10 Aligned_cols=50 Identities=20% Similarity=0.284 Sum_probs=29.6
Q ss_pred eeeEEECCC--CCcccCceEEEc--Cc---e---eeE-EeCCCeeEEE--ec----CCceEEEEEEe
Q psy7679 430 VAGFVKGRE--GEGVAGASIAVE--GL---G---HVV-YSAQDGDYWR--LL----APGNYTLHVSA 479 (608)
Q Consensus 430 I~G~V~D~~--g~pl~~A~V~i~--g~---~---~~~-~Td~~G~f~~--~l----~~g~y~l~~s~ 479 (608)
+++.++|.+ ..+..+..|.|. +- . ... .++..|.|.. .+ +.|.|+|.+..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~v~i~dp~g~~v~~~~~~~~~~~G~~~~~~~lp~~~~~G~y~i~~~~ 85 (99)
T PF01835_consen 19 FRAIVRDLDNDFKPPANSPVTVTIKDPSGNEVFRWSVNTTNENGIFSGSFQLPDDAPLGTYTIRVKT 85 (99)
T ss_dssp EEEEEEEECTTCSCESSEEEEEEEEETTSEEEEEEEEEETTCTTEEEEEEE--SS---EEEEEEEEE
T ss_pred EEEEEeccccccccccCCceEEEEECCCCCEEEEEEeeeeCCCCEEEEEEECCCCCCCEeEEEEEEE
Confidence 677777755 345555554443 22 1 133 5688998843 23 45999999988
No 188
>PF13115 YtkA: YtkA-like
Probab=45.14 E-value=77 Score=25.94 Aligned_cols=16 Identities=25% Similarity=0.395 Sum_probs=14.5
Q ss_pred ECCCCCcccCceEEEc
Q psy7679 435 KGREGEGVAGASIAVE 450 (608)
Q Consensus 435 ~D~~g~pl~~A~V~i~ 450 (608)
+|.+|+|+.+|.|.+.
T Consensus 28 ~~~~g~pv~~a~V~~~ 43 (86)
T PF13115_consen 28 VDQGGKPVTDADVQFE 43 (86)
T ss_pred ECCCCCCCCCCEEEEE
Confidence 6799999999999986
No 189
>PF05688 DUF824: Salmonella repeat of unknown function (DUF824); InterPro: IPR008542 This family consists of a series of repeated sequences (of around 180 residues) which are found in Salmonella typhimurium, Salmonella typhi and Escherichia coli. These repeats are almost always found with this entry. The repeats are associated with RatA and RatB, the coding sequences of which are found in the pathogeneicity island of Salmonella. The sequences may be determinants of pathogenicity [, ].
Probab=44.14 E-value=28 Score=25.76 Aligned_cols=21 Identities=24% Similarity=0.319 Sum_probs=18.7
Q ss_pred eeeEEECCCCCcccCceEEEc
Q psy7679 430 VAGFVKGREGEGVAGASIAVE 450 (608)
Q Consensus 430 I~G~V~D~~g~pl~~A~V~i~ 450 (608)
++-+|+|.+|.|++++.+.|.
T Consensus 17 ltVt~kda~G~pv~n~~f~l~ 37 (47)
T PF05688_consen 17 LTVTVKDANGNPVPNAPFTLT 37 (47)
T ss_pred EEEEEECCCCCCcCCceEEEE
Confidence 677889999999999999985
No 190
>COG3422 Uncharacterized conserved protein [Function unknown]
Probab=40.49 E-value=21 Score=27.53 Aligned_cols=32 Identities=22% Similarity=0.454 Sum_probs=26.4
Q ss_pred eEEeCCCeeEEEecCCceEEEEEEecceeeEE
Q psy7679 455 VVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAI 486 (608)
Q Consensus 455 ~~~Td~~G~f~~~l~~g~y~l~~s~~GY~~~~ 486 (608)
...-|.+|.|.+.+...+..+.++..||.+..
T Consensus 6 ei~kdk~Ge~rfrlkA~N~eiI~~sEgY~ska 37 (59)
T COG3422 6 EIYKDKAGEYRFRLKAANGEIILTSEGYKSKA 37 (59)
T ss_pred EEEEcCCCcEEEEEEccCccEEEeecccchhH
Confidence 34568999998888788888999999999854
No 191
>COG3608 Predicted deacylase [General function prediction only]
Probab=40.45 E-value=78 Score=33.46 Aligned_cols=25 Identities=12% Similarity=0.203 Sum_probs=17.6
Q ss_pred eeccCcccchhh-hccCeEEEEEeecC
Q psy7679 374 YVVSGGMQDYNY-IHANTLEITLELGC 399 (608)
Q Consensus 374 Y~~~G~~~Dw~y-~~~~~~~~t~El~~ 399 (608)
-..+.+ .+|.+ -..|.+++-+.+++
T Consensus 250 ~~~~~~-~~~i~Ap~~G~v~~~v~lGd 275 (331)
T COG3608 250 LALPSS-DEMIRAPAGGLVEFLVDLGD 275 (331)
T ss_pred eecccc-cceeecCCCceEEEeecCCC
Confidence 344445 66666 57888888888887
No 192
>PF07550 DUF1533: Protein of unknown function (DUF1533); InterPro: IPR011432 This domain is found duplicated in proteins of unknown function. The proteins typically also contain leucine-rich repeats.
Probab=39.96 E-value=81 Score=24.78 Aligned_cols=20 Identities=25% Similarity=0.464 Sum_probs=16.9
Q ss_pred CCceEEEEEEecceeeEEEE
Q psy7679 469 APGNYTLHVSAPGYEPAIHQ 488 (608)
Q Consensus 469 ~~g~y~l~~s~~GY~~~~~~ 488 (608)
..|.|+|++.+.||...+..
T Consensus 45 ~~G~~~I~I~A~GY~d~~~~ 64 (65)
T PF07550_consen 45 KDGENTIVIKATGYKDKTFT 64 (65)
T ss_pred cCCceEEEEEeCCccceEEE
Confidence 56899999999999987654
No 193
>PF14054 DUF4249: Domain of unknown function (DUF4249)
Probab=39.29 E-value=1.5e+02 Score=30.29 Aligned_cols=53 Identities=28% Similarity=0.496 Sum_probs=34.3
Q ss_pred CcccCceEEE-cCcee-eE-Ee--CCC-eeEE-E---ecCCce-EEEEEEecceeeEEEEEEEe
Q psy7679 440 EGVAGASIAV-EGLGH-VV-YS--AQD-GDYW-R---LLAPGN-YTLHVSAPGYEPAIHQVSVE 492 (608)
Q Consensus 440 ~pl~~A~V~i-~g~~~-~~-~T--d~~-G~f~-~---~l~~g~-y~l~~s~~GY~~~~~~v~v~ 492 (608)
.++.+|+|.| .+... .. .. +.. |.|. . ...+|. |+|.|+..|.+..+...+++
T Consensus 58 ~~v~~A~V~i~~~~~~~~~~~~~~~~~~g~Y~~~~~~~~~~G~~Y~L~V~~~~~~~~sa~~~vp 121 (298)
T PF14054_consen 58 EPVSGATVTIYEDGQGNEYLFEESSNNDGVYYSSNSFRGRPGRTYRLEVETPGGKTYSAETTVP 121 (298)
T ss_pred cccCCcEEEEEeCCCcceEeecccCCCcceEEecccccccCCCEEEEEEEECCCCEEEEEEEEC
Confidence 3499999999 43332 11 11 222 7775 2 345665 99999998888877666665
No 194
>PHA02265 hypothetical protein
Probab=34.69 E-value=16 Score=30.19 Aligned_cols=25 Identities=36% Similarity=0.542 Sum_probs=22.5
Q ss_pred ccchhHHHHHHHHHhhccccccccC
Q psy7679 575 TYNHDFYKSMQAVYNQSLRTYPKIN 599 (608)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (608)
|++...|.|||.-|---||.|.||.
T Consensus 64 ti~y~~~ds~q~yy~yllrn~~ki~ 88 (103)
T PHA02265 64 TIDYEYYDSLQEYYIYLLRNSEKIE 88 (103)
T ss_pred EeeHHHHhHHHHHHHHHHHhHHHHH
Confidence 6788899999999999999999874
No 195
>TIGR03000 plancto_dom_1 Planctomycetes uncharacterized domain TIGR03000. Domains described by this model are found, so far, only in the Planctomycetes (Pirellula sp. strain 1 and Gemmata obscuriglobus), in up to six proteins per genome, and may be duplicated within a protein. The function is unknown.
Probab=28.40 E-value=2.2e+02 Score=23.29 Aligned_cols=56 Identities=20% Similarity=0.259 Sum_probs=29.3
Q ss_pred cCceEEEcCceeeEEeCCCeeEE-EecCCce---EEEEEEe--cceee--EEEEEEEecCCcceEEE
Q psy7679 443 AGASIAVEGLGHVVYSAQDGDYW-RLLAPGN---YTLHVSA--PGYEP--AIHQVSVENSTKATQLN 501 (608)
Q Consensus 443 ~~A~V~i~g~~~~~~Td~~G~f~-~~l~~g~---y~l~~s~--~GY~~--~~~~v~v~~~~~~~~~~ 501 (608)
.+|.|.+.|... ..+...-.|. ..|.+|. |+|.+.. .| .+ .++.|.+. .++..+++
T Consensus 11 adAkl~v~G~~t-~~~G~~R~F~T~~L~~G~~y~Y~v~a~~~~dG-~~~t~~~~V~vr-AGd~~~v~ 74 (75)
T TIGR03000 11 ADAKLKVDGKET-NGTGTVRTFTTPPLEAGKEYEYTVTAEYDRDG-RILTRTRTVVVR-AGDTVTVD 74 (75)
T ss_pred CCCEEEECCeEc-ccCccEEEEECCCCCCCCEEEEEEEEEEecCC-cEEEEEEEEEEc-CCceEEee
Confidence 678999977542 2233333453 3577776 4444432 44 33 33446665 55554443
No 196
>PF07411 DUF1508: Domain of unknown function (DUF1508); InterPro: IPR010879 This domain is found in a family of proteins, which have no known function. Members of this family are often found as tandem repeats and in some cases represent the whole protein.; PDB: 3BID_H 2K49_A 2K8E_A 2K7I_A.
Probab=28.08 E-value=31 Score=25.64 Aligned_cols=27 Identities=30% Similarity=0.464 Sum_probs=19.6
Q ss_pred CCCeeEEEecCCceEEEEEEecceeeE
Q psy7679 459 AQDGDYWRLLAPGNYTLHVSAPGYEPA 485 (608)
Q Consensus 459 d~~G~f~~~l~~g~y~l~~s~~GY~~~ 485 (608)
|.+|.|.+.|..+..+|+++..||.+.
T Consensus 1 d~~g~~~f~L~a~ng~viasse~Y~sk 27 (49)
T PF07411_consen 1 DSDGQFRFRLKAGNGEVIASSEGYSSK 27 (49)
T ss_dssp ETTSEEEEEEE-TTS-EEEEBEEBSSH
T ss_pred CCCCCEEEEEEcCCCCEEEecCCcCCH
Confidence 568999777767777788899999764
No 197
>cd06909 M14_ASPA Aspartoacylase (ASPA) belongs to the Succinylglutamate desuccinylase/aspartoacylase subfamily of the M14 family of metallocarboxypeptidases. ASPA (also known as aminoacylase 2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=27.60 E-value=1.7e+02 Score=30.34 Aligned_cols=62 Identities=19% Similarity=0.069 Sum_probs=31.8
Q ss_pred EEeeCCCCCccceeEEeCCCCCcccccCCCCCCCcCCCCcccccCCCCCCchHHHHHHHHHHhcC---Cceeeceee
Q psy7679 159 LVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNN---PFVLSGNLH 232 (608)
Q Consensus 159 l~~~~npdg~~~~~~~~g~~ha~evdLNRNf~~~w~~~~~~~~~~G~~p~sePEt~al~~~l~~~---~~l~~~~~h 232 (608)
+.+..||.+.+.... -.+.||||.||-.+.....+..+ .+-.++.+...+... +...-+++|
T Consensus 38 ~~~i~Np~A~~~~~R------y~d~DLNR~Fpg~~~~~~~~~~~------e~~~A~~l~~~l~~~~~~~~D~~iDLH 102 (282)
T cd06909 38 HPVIANPRAVEACRR------YIDTDLNRCFTLENLSNSELLPY------EVKRAKELNQKLGPKGNSPCDFVIDLH 102 (282)
T ss_pred EEEecCHHHHHhCCc------cCCCCCCCCCCCCccCCCCCCCH------HHHHHHHHHHHHhhccCCCceEEEECC
Confidence 345678866543322 22579999999765432111111 122244455555432 344567777
No 198
>PF05751 FixH: FixH; InterPro: IPR008620 This family consists of several Rhizobium FixH like proteins. It has been suggested that the four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalysed by FixG [].
Probab=27.37 E-value=2.1e+02 Score=25.92 Aligned_cols=50 Identities=18% Similarity=0.280 Sum_probs=32.1
Q ss_pred cceeeEEECCCCCcccCceEEEcC---------ceeeEEeCCCeeEEEe---cCCceEEEEE
Q psy7679 428 RGVAGFVKGREGEGVAGASIAVEG---------LGHVVYSAQDGDYWRL---LAPGNYTLHV 477 (608)
Q Consensus 428 ~gI~G~V~D~~g~pl~~A~V~i~g---------~~~~~~Td~~G~f~~~---l~~g~y~l~~ 477 (608)
..+.-+++|.+|.|+.++.+.+.= -........+|.|... +.+|.+.|.+
T Consensus 69 ~~~~i~~~d~~g~~~~~~~~~l~l~rp~~~~~D~~~~l~~~~~g~y~~~~~~~~~G~W~l~l 130 (146)
T PF05751_consen 69 NSLTIRLTDPNGAPVSGAKLTLSLYRPTDAKLDFTLTLTESAPGVYRAPVPLLKKGRWYLRL 130 (146)
T ss_pred CeEEEEEEcCCCCcCcCceEEEEEECCCCccCCeeEEeeECCCceEEEEcCCCCCccEEEEE
Confidence 457778899999999999998841 1112234566666442 3456666665
No 199
>PRK13484 putative iron-regulated outer membrane virulence protein; Provisional
Probab=27.34 E-value=39 Score=39.20 Aligned_cols=57 Identities=18% Similarity=0.162 Sum_probs=36.8
Q ss_pred Ccccceeecccccchhhh------HHHHHHHHHh-hhhhhhhhcCCCcchhc---cccCcceecccc
Q psy7679 519 SITDNIETVTKYSTQLEM------SYAMEAVETA-HSVLAEKQNGFPGILDS---LRISYPKAGVST 575 (608)
Q Consensus 519 ~l~evvv~~t~~~~~~~~------~~~~~~~~~~-~~~~~~~~~g~~~~~~~---~~~~~~~~g~~~ 575 (608)
.|+||+|++++..+.... ..++++++.. ...+.+.+..+|||... ...++.|||.+.
T Consensus 29 ~l~~vvVta~r~~~~~~~~p~sv~vit~~~i~~~~~~~l~d~L~~vPGV~v~~~~~~~~i~iRG~~~ 95 (682)
T PRK13484 29 KEDTLVVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISITGGNEKPDISIRGLSG 95 (682)
T ss_pred cCCEEEEEecCcccchhhCCceEEEECHHHHhhcCcCCHHHHHhcCCCEEEeCCCCCceEEEecCCC
Confidence 488899987764332221 1566777765 45777777777877663 223389999883
No 200
>PRK15310 fimbrial outer membrane usher protein TcfC; Provisional
Probab=26.51 E-value=1.1e+02 Score=36.46 Aligned_cols=39 Identities=13% Similarity=0.021 Sum_probs=31.8
Q ss_pred ceeeEEECCCCCcccCceEEEcCceeeEEeCCCeeEEEecCC
Q psy7679 429 GVAGFVKGREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAP 470 (608)
Q Consensus 429 gI~G~V~D~~g~pl~~A~V~i~g~~~~~~Td~~G~f~~~l~~ 470 (608)
.+-|+++|+.|.||.+|.|.= ..++.||++|.|.+.+..
T Consensus 787 ~yiGr~~~~~G~~l~~a~IlN---~~~~~td~~GgF~~d~d~ 825 (895)
T PRK15310 787 LYVGRVLDKDGRPLLDAQPLN---YPFLSLGPSGRFSLQSEH 825 (895)
T ss_pred EEEEEEECCCCCCcccceeec---CccceecCCCCEEEEccc
Confidence 377999999999999998753 234889999999988643
No 201
>TIGR02867 spore_II_P stage II sporulation protein P. Stage II sporulation protein P is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIIP, along with SpoIIM and SpoIID, is one of three major proteins involved in engulfment of the forespore by the mother cell. This protein family is named for the single member in Bacillus subtilis, although most sporulating bacteria have two members.
Probab=24.25 E-value=4.9e+02 Score=25.39 Aligned_cols=95 Identities=18% Similarity=0.131 Sum_probs=49.7
Q ss_pred HHHHHHHHhCC-cEEEEEEcccceeeeecCCCCCCCC------CCCCCCCCCHHHHHHHHHHHHHhhccccCCCCCCCCC
Q psy7679 287 LAVEKWLQDIP-FVLSANLHGGSLVANYPYDDNQAMK------PQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYP 359 (608)
Q Consensus 287 ~ai~~~~~~~~-~~~~~~~Hs~~~~i~yP~~~~~~~~------~~~~~~~~d~~~~~~la~~~a~~~~~~~~~~~~~~~~ 359 (608)
+.+.+.++++| +.+.+|+|--+.--. .+...-.+. .-.....|+.+.-..+|..+......++.|
T Consensus 71 ~tv~~~l~~~p~i~~viDiHRDs~~~~-~~t~~inG~~~Aki~fVvG~~np~~~~N~~fA~~l~~~~~~~yPg------- 142 (196)
T TIGR02867 71 ETVKKALKENKDLKYIIDLHRDSVRRK-KTTVNINGESVAKVMFVIGKNNPHFEKNLQLANKLHAKLEKKYPG------- 142 (196)
T ss_pred HHHHHHHHHCCCceEEEEeecCCCCCC-cceEEECCEEEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHhhCCC-------
Confidence 34556777776 689999997552100 000000000 000123477777777787776655555432
Q ss_pred CCCCCCcccccceeeeccCcccchhh-hccCeEEEEEeecCC
Q psy7679 360 EENFPGGIVNGAQWYVVSGGMQDYNY-IHANTLEITLELGCY 400 (608)
Q Consensus 360 ~~~f~~g~~~g~~~Y~~~G~~~Dw~y-~~~~~~~~t~El~~~ 400 (608)
.+.| .|.-++ ....| .+..+-++.||+|..
T Consensus 143 -------l~rg--i~~k~~--~~~~YNQdl~~~alLiEiG~~ 173 (196)
T TIGR02867 143 -------LSRG--IFYKDY--GNGVYNQDLSPNAILIEVGGV 173 (196)
T ss_pred -------cccc--eEEccC--CCCcccccCCCCeEEEEECCC
Confidence 2222 122111 22234 566788999999984
No 202
>TIGR01779 TonB-B12 TonB-dependent vitamin B12 receptor. This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin).
Probab=23.65 E-value=51 Score=37.69 Aligned_cols=57 Identities=14% Similarity=0.209 Sum_probs=33.4
Q ss_pred Ccccceeecccccchhhh------HHHHHHHHHh-hhhhhhhhcCCCcchhccc------cCcceecccc
Q psy7679 519 SITDNIETVTKYSTQLEM------SYAMEAVETA-HSVLAEKQNGFPGILDSLR------ISYPKAGVST 575 (608)
Q Consensus 519 ~l~evvv~~t~~~~~~~~------~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~------~~~~~~g~~~ 575 (608)
.|+||||++++....... ..+.++++.. ...+.+.++-+|||...-. .++.|||.+.
T Consensus 27 ~l~eVvVta~r~~~~~~~~~~~v~vit~~~i~~~~~~~l~D~L~~~PGV~v~~~g~~~~~~~~~iRG~~~ 96 (614)
T TIGR01779 27 PLDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLPGVSIAQNGGRGQNTSLFLRGTES 96 (614)
T ss_pred CcCcEEEEeeccccchhhccCceEEECHHHHHhhCCCCHHHHHHhCCCeEEeecCCCCceeeEEEeCCCC
Confidence 388999987764322111 1566677765 3355565556666664321 1278999864
No 203
>PF13754 Big_3_4: Bacterial Ig-like domain (group 3)
Probab=23.60 E-value=1.7e+02 Score=22.01 Aligned_cols=27 Identities=30% Similarity=0.423 Sum_probs=19.5
Q ss_pred eeeEEeCCCeeEEEec---CCceEEEEEEe
Q psy7679 453 GHVVYSAQDGDYWRLL---APGNYTLHVSA 479 (608)
Q Consensus 453 ~~~~~Td~~G~f~~~l---~~g~y~l~~s~ 479 (608)
...++.+.+|.+.+.+ ..|.|.|.++.
T Consensus 3 ~~~~t~~~~G~Ws~t~~~~~dG~y~itv~a 32 (54)
T PF13754_consen 3 TYTTTVDSDGNWSFTVPALADGTYTITVTA 32 (54)
T ss_pred EEEEEECCCCcEEEeCCCCCCccEEEEEEE
Confidence 3456678999997653 45888888865
No 204
>PRK10641 btuB vitamin B12/cobalamin outer membrane transporter; Provisional
Probab=23.54 E-value=51 Score=37.68 Aligned_cols=56 Identities=11% Similarity=0.140 Sum_probs=35.6
Q ss_pred Ccccceeecccccchhhh------HHHHHHHHHh-hhhhhhhhcCCCcchhccc------cCcceeccc
Q psy7679 519 SITDNIETVTKYSTQLEM------SYAMEAVETA-HSVLAEKQNGFPGILDSLR------ISYPKAGVS 574 (608)
Q Consensus 519 ~l~evvv~~t~~~~~~~~------~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~------~~~~~~g~~ 574 (608)
.|+||||++++..+.... ..+.++++.+ ...+.+.+..+|||...-. ..+.|||..
T Consensus 24 ~l~evvVta~r~~~~~~~~p~~vsvIt~e~i~~~~~~~l~d~L~~~pGv~~~~~gg~g~~~~i~iRG~~ 92 (614)
T PRK10641 24 SPDTLVVTANRFQQPVSTVLAPTTVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGLGQLSSLFIRGTN 92 (614)
T ss_pred CCCcEEEeccccccchhccCCceEEECHHHHHhhCcCCHHHHHhhCCCEEEEecCCCCccceEEEeCCC
Confidence 388999988765432222 1666777766 5577777777777765211 128899974
No 205
>PRK13486 bifunctional enterobactin receptor/adhesin protein; Provisional
Probab=22.04 E-value=48 Score=38.63 Aligned_cols=56 Identities=16% Similarity=0.180 Sum_probs=34.9
Q ss_pred cccceeecccccchhhh-H-----HHHHHHHHh-hhhhhhhhcCCCcchhccc------cCcceecccc
Q psy7679 520 ITDNIETVTKYSTQLEM-S-----YAMEAVETA-HSVLAEKQNGFPGILDSLR------ISYPKAGVST 575 (608)
Q Consensus 520 l~evvv~~t~~~~~~~~-~-----~~~~~~~~~-~~~~~~~~~g~~~~~~~~~------~~~~~~g~~~ 575 (608)
+++|||+++|..+.... . .+.+.|+.. ...+.+.+..+|||...-. ..+.|||.++
T Consensus 25 ~~~vvVTa~r~~~~~~~~p~sv~vIt~~~I~~~~~~~l~d~l~~vpGV~v~~~~g~~~~~~i~iRG~~~ 93 (696)
T PRK13486 25 EDVMIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKTGGLEISIRGMPA 93 (696)
T ss_pred CceEEEeecceecchhhCCccEEEECHHHHhhcCCCCHHHHHhhCCCeEEeccCCCCCcceEEEeCCCC
Confidence 67777776653322222 1 566777766 4477777777888866432 1288999984
No 206
>COG4932 Predicted outer membrane protein [Cell envelope biogenesis, outer membrane]
Probab=20.15 E-value=1.1e+02 Score=37.86 Aligned_cols=50 Identities=22% Similarity=0.333 Sum_probs=38.5
Q ss_pred EC-CCCCcccCceEEEcCce-----eeEEeCCCeeEEE-ecCCceEEEEEE--ecceee
Q psy7679 435 KG-REGEGVAGASIAVEGLG-----HVVYSAQDGDYWR-LLAPGNYTLHVS--APGYEP 484 (608)
Q Consensus 435 ~D-~~g~pl~~A~V~i~g~~-----~~~~Td~~G~f~~-~l~~g~y~l~~s--~~GY~~ 484 (608)
+| .++.+|+||.-.+.+.. .+.+||.+|.-.. .|.||.|+++=+ -.||.-
T Consensus 1163 ~Ds~t~a~LaGA~Fel~d~dG~~VqegLtTD~nG~i~VtdL~PGdYqFVETkAP~GY~L 1221 (1531)
T COG4932 1163 VDSATKATLAGAEFELQDEDGTLVQEGLTTDENGKINVTDLAPGDYQFVETKAPTGYIL 1221 (1531)
T ss_pred ecccccccccCcEEEEEcCCCcEeeccceecCCCcEEecccCCcceeeeeecCCcceee
Confidence 46 58999999999998643 2679999999865 589998887654 356654
Done!