RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7679
(608 letters)
>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 296
Score = 226 bits (577), Expect = 4e-70
Identities = 114/316 (36%), Positives = 158/316 (50%), Gaps = 26/316 (8%)
Query: 117 VQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLAR--- 173
+ F++H M+A L+ + +NY ++T L+S+G+SV+ R LWVLV
Sbjct: 1 LDFNYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFK 60
Query: 174 FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHG 233
+V + + D + + L T + S N G
Sbjct: 61 YVANMHGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIH--------IMPSMNPDG 112
Query: 234 GAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWL 293
D IGR+N + DLNRNFP F + + +PET+AV KWL
Sbjct: 113 FEA---------VKKPDCYYSIGRENYNQYDLNRNFPDAFEYNNVSR--QPETVAVMKWL 161
Query: 294 QDIPFVLSANLHGGSLVANYPYDD--NQAMKPQVDSPTPDDSIFKLLASSYANAHKKMYK 351
+ FVLSANLHGG+LVA+YP+D+ S TPDD +F+ LA +YA+ + M K
Sbjct: 162 KTETFVLSANLHGGALVASYPFDNGVQATGALYSRSLTPDDDVFQYLAHTYASRNPNMKK 221
Query: 352 DPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPAKDLPSY 411
C NFP G+ NG WY + GGMQDYNYI A EITLEL C K+P + LPS+
Sbjct: 222 GDECKNK--MNFPNGVTNGYSWYPLQGGMQDYNYIWAQCFEITLELSCCKYPREEKLPSF 279
Query: 412 WEDNLPALLSYIEQVH 427
W +N +L+ YI+QVH
Sbjct: 280 WNNNKASLIEYIKQVH 295
Score = 77.6 bits (190), Expect = 2e-16
Identities = 58/211 (27%), Positives = 86/211 (40%), Gaps = 30/211 (14%)
Query: 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQ-GGGTNKNKVSIISLYRLVT 94
Y + + FL AQ S LHSIGKSV+ R+LW L G ++++ I
Sbjct: 5 YHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFK---- 60
Query: 95 VSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKR 154
++ ++ + + IT + + +
Sbjct: 61 -------YVANMHGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGF 113
Query: 155 ELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETL 214
E GR N N DLNRNFPD F+ ++ R+ ET+
Sbjct: 114 EAVKKPDCYYSI---------GRENYNQYDLNRNFPDAFEYNNVSRQP---------ETV 155
Query: 215 AMISFIKNNPFVLSGNLHGGAIVASYPFDDS 245
A++ ++K FVLS NLHGGA+VASYPFD+
Sbjct: 156 AVMKWLKTETFVLSANLHGGALVASYPFDNG 186
>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain
{Crested duck (Lophonetta specularioides) [TaxId: 8836]}
Length = 301
Score = 214 bits (546), Expect = 2e-65
Identities = 131/317 (41%), Positives = 178/317 (56%), Gaps = 24/317 (7%)
Query: 116 PVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLAR-- 173
PV F HH+++ M+ L YP++TRLYSVG+SVE REL+V+ +D G +
Sbjct: 5 PVDFRHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEF 64
Query: 174 -FVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLH 232
++G + N V + + + V L T I P + N
Sbjct: 65 KYIGNMHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQST-----RIHIMPSM---NPD 116
Query: 233 GGAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKW 292
G + R N+++ DLNRNFP QF +PETLAV W
Sbjct: 117 GYEKSQEGDRGGTVG---------RNNSNNYDLNRNFPDQFFQVTDPP--QPETLAVMSW 165
Query: 293 LQDIPFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAHKKMYKD 352
L+ PFVLSANLHGGSLV NYP+DD++ + S +PDD++F+ LA SY+ +KKMY+
Sbjct: 166 LKTYPFVLSANLHGGSLVVNYPFDDDEQ-GIAIYSKSPDDAVFQQLALSYSKENKKMYQG 224
Query: 353 PGCPE-YPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPAKDLPSY 411
C + YP E FP GI NGAQWY V GGMQD+NY++ N E+T+ELGC K+P A++LP Y
Sbjct: 225 SPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKAEELPKY 284
Query: 412 WEDNLPALLSYIEQVHR 428
WE N +LL +I+QVHR
Sbjct: 285 WEQNRRSLLQFIKQVHR 301
Score = 71.5 bits (174), Expect = 3e-14
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 36/214 (16%)
Query: 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQGGGTNKNKVSIISLYRLVTV 95
+ F ++ FL A + PS +L+S+GKSV+ R+L+ + +
Sbjct: 10 HHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVM-------------------EI 50
Query: 96 STTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRE 155
S P E + F + + L I N V V+
Sbjct: 51 SDNPGIHEA----GEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTR 106
Query: 156 LWVLVYND----EEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEP 211
+ ++ + E+ VGRNN+N DLNRNFPDQF ++ +
Sbjct: 107 IHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQVTDPPQP--------- 157
Query: 212 ETLAMISFIKNNPFVLSGNLHGGAIVASYPFDDS 245
ETLA++S++K PFVLS NLHGG++V +YPFDD
Sbjct: 158 ETLAVMSWLKTYPFVLSANLHGGSLVVNYPFDDD 191
>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces
vulgaris [TaxId: 2026]}
Length = 323
Score = 139 bits (351), Expect = 2e-37
Identities = 60/338 (17%), Positives = 108/338 (31%), Gaps = 54/338 (15%)
Query: 116 PVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARF- 174
+HNY +M ++ + NYPN+ + +S+G+S E RELW + +D G+ +
Sbjct: 4 SYDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVL 63
Query: 175 -VGRNNANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHG 233
++A D ++ + L + N + N++
Sbjct: 64 YTALHHAREHLTVEMALYTLDLFTQNYNLDSRITNL----------VNNREIYIVFNINP 113
Query: 234 GAIVASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSV------------ 281
K + DLNRN+ ++G +S
Sbjct: 114 DGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSA 173
Query: 282 -PEPETLAVEKWLQDI------PFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSI 334
PET A+ ++ H S + YPY P D D ++
Sbjct: 174 FSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTYTDVPS-DMTQDDFNV 232
Query: 335 FKLLASSYANAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEIT 394
FK +A++ A + + + Y+ G M D+ Y T
Sbjct: 233 FKTMANTMAQTNGYTPQ-----------------QASDLYITDGDMTDWAYGQHKIFAFT 275
Query: 395 LELGCYK-----FPPAKDLPSYWEDNLPALLSYIEQVH 427
E+ +PP + + N A+L E+
Sbjct: 276 FEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKAD 313
Score = 76.9 bits (188), Expect = 7e-16
Identities = 42/227 (18%), Positives = 80/227 (35%), Gaps = 31/227 (13%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQ---GGGTNKNKVSIISLYR 91
Y +++E+ + A P+ VK SIGKS + R+LWA++ GT++N+ ++
Sbjct: 8 GYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVL---- 63
Query: 92 LVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSV 151
++ + ++ +TQ IT N +
Sbjct: 64 ----------YTALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINP 113
Query: 152 EKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNV----- 206
+ E + + + N + ++ G DLNRN+ ++ P +
Sbjct: 114 DGGEYDISSGSYKSWRKN--RQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGR 171
Query: 207 -KKLEPETLAMISFIKN------NPFVLSGNLHGGAIVASYPFDDSK 246
PET AM FI + H + + YP+ +
Sbjct: 172 SAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTY 218
>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 305
Score = 138 bits (347), Expect = 5e-37
Identities = 59/329 (17%), Positives = 102/329 (31%), Gaps = 52/329 (15%)
Query: 120 SHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNN 179
++H+ + E+++I ++P+L R +G S E R ++VL ++ +G +
Sbjct: 8 AYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIH 67
Query: 180 AN---GVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAI 236
+ + S +R + S ++ L +
Sbjct: 68 SREWISQATAIWTARKIVSDYQRDPA-------------ITSILEKMDIFLLPVANPDGY 114
Query: 237 VASYPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVP------------EP 284
V Y ++ S + D NRN+ F + P E
Sbjct: 115 V--YTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANSEV 172
Query: 285 ETLAVEKWLQDIP-FVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYA 343
E +V ++Q F +LH S + YPY + PD +A A
Sbjct: 173 EVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYS-------VKKAPDAEELDKVARLAA 225
Query: 344 NAHKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLEL---GCY 400
A + Y SG D+ Y + T EL G Y
Sbjct: 226 KALASVSG----------TEYQVGPTCTTVYPASGSSIDWAYDNGIKFAFTFELRDTGTY 275
Query: 401 KF-PPAKDLPSYWEDNLPALLSYIEQVHR 428
F PA + E+ L + +E V
Sbjct: 276 GFLLPANQIIPTAEETWLGLKTIMEHVRD 304
Score = 77.6 bits (190), Expect = 3e-16
Identities = 32/220 (14%), Positives = 64/220 (29%), Gaps = 29/220 (13%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQ---GGGTNKNKVSIISLYR 91
Y S + + + A P + IG S +NR ++ L+ G G + V + +
Sbjct: 8 AYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRRPAVWLNAGIH 67
Query: 92 LVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSV 151
+ I + +Y + + I + +
Sbjct: 68 SREWISQATAIWT------------ARKIVSDYQRDP-AITSILEKMDIFLLPVANPDGY 114
Query: 152 EKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFD-----SSSERREQPLNV 206
+ ++ G D NRN+ F +
Sbjct: 115 VYTQTQ-------NRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPH 167
Query: 207 KKLEPETLAMISFIKNNP-FVLSGNLHGGAIVASYPFDDS 245
E E +++ FI+ + F +LH + + YP+ S
Sbjct: 168 ANSEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYS 207
>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 307
Score = 137 bits (345), Expect = 8e-37
Identities = 51/326 (15%), Positives = 100/326 (30%), Gaps = 48/326 (14%)
Query: 120 SHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNN 179
++H ++ E++++ +P L ++G S E R + VL ++ G +
Sbjct: 10 AYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFST--GGDKPAIWLDAGIH 67
Query: 180 ANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVAS 239
A + + ++ + + + N G +
Sbjct: 68 AREWVTQATALWTANKIVSDYGKDPSITSILDALDIFL--------LPVTNPDGYVFSQT 119
Query: 240 YPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVP------------EPETL 287
+ S + VD NRN+ FG +S P E E
Sbjct: 120 KN----RMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEVK 175
Query: 288 AVEKWLQDIP-FVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAH 346
++ +++ LH S + +PY + D +A A +
Sbjct: 176 SIVDFIKSHGKVKAFIILHSYSQLLMFPYGYK-------CTKLDDFDELSEVAQKAAQSL 228
Query: 347 KKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLEL---GCYKF- 402
+ ++ + Y SGG D++Y + EL G Y F
Sbjct: 229 RSLHG----------TKYKVGPICSVIYQASGGSIDWSYDYGIKYSFAFELRDTGRYGFL 278
Query: 403 PPAKDLPSYWEDNLPALLSYIEQVHR 428
PA+ + E+ L + +E V
Sbjct: 279 LPARQILPTAEETWLGLKAIMEHVRD 304
Score = 80.2 bits (197), Expect = 4e-17
Identities = 32/220 (14%), Positives = 66/220 (30%), Gaps = 27/220 (12%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQ-GGGTNKNKVSIISLYRLV 93
Y + +E+++ + ++P V +IG S +NR + L+ G +K + + +
Sbjct: 10 AYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGDKPAIWLDAGIHAR 69
Query: 94 TVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEK 153
T ++ + + IT L + +
Sbjct: 70 EWVTQAT----------------ALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDG 113
Query: 154 RELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSER-----REQPLNVKK 208
+ V + GVD NRN+ F
Sbjct: 114 YVFS----QTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSAN 169
Query: 209 LEPETLAMISFIKNNP-FVLSGNLHGGAIVASYPFDDSKC 247
E E +++ FIK++ LH + + +P+
Sbjct: 170 SEVEVKSIVDFIKSHGKVKAFIILHSYSQLLMFPYGYKCT 209
>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId:
9913]}
Length = 307
Score = 132 bits (332), Expect = 6e-35
Identities = 60/324 (18%), Positives = 108/324 (33%), Gaps = 47/324 (14%)
Query: 120 SHHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNN 179
++H ++ ++ + +P L +G+S E R ++VL ++ + ++ +
Sbjct: 11 TYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRPAI-WIDLGIH 69
Query: 180 ANGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVAS 239
+ +E Q + + I N G A S
Sbjct: 70 SREWITQATGVWFAKKFTEDYGQDPSFTAILDSM-----DIFLEIVT---NPDGFAFTHS 121
Query: 240 YPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVP------------EPETL 287
K S+ VD NRN+ FG + +S P E E
Sbjct: 122 QNRLWRKT----RSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVK 177
Query: 288 AVEKWLQDI-PFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAH 346
++ +++D F ++H S + YPY PD + +A S A
Sbjct: 178 SIVDFVKDHGNFKAFLSIHSYSQLLLYPYGYT-------TQSIPDKTELNQVAKSAVAAL 230
Query: 347 KKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLEL---GCYKF- 402
K +Y ++ G + Y SGG D++Y T EL G Y F
Sbjct: 231 KSLYG---------TSYKYGSI-ITTIYQASGGSIDWSYNQGIKYSFTFELRDTGRYGFL 280
Query: 403 PPAKDLPSYWEDNLPALLSYIEQV 426
PA + ++ +L+ +E
Sbjct: 281 LPASQIIPTAQETWLGVLTIMEHT 304
Score = 81.4 bits (200), Expect = 2e-17
Identities = 35/220 (15%), Positives = 73/220 (33%), Gaps = 28/220 (12%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQ--GGGTNKNKVSIISLYRL 92
Y + DE+ F+ ++P V IG+S + R ++ L+ GG+N+ + I
Sbjct: 11 TYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNRPAIWIDLGIHS 70
Query: 93 VTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVE 152
T + +T+ + T ++ + + +
Sbjct: 71 REWITQAT----------------GVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPD 114
Query: 153 KRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFD-----SSSERREQPLNVK 207
+ + + GVD NRN+ F SS
Sbjct: 115 GFAFT----HSQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYA 170
Query: 208 KLEPETLAMISFIKNN-PFVLSGNLHGGAIVASYPFDDSK 246
E E +++ F+K++ F ++H + + YP+ +
Sbjct: 171 NSEVEVKSIVDFVKDHGNFKAFLSIHSYSQLLLYPYGYTT 210
>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 304
Score = 119 bits (299), Expect = 1e-30
Identities = 45/324 (13%), Positives = 96/324 (29%), Gaps = 48/324 (14%)
Query: 121 HHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNA 180
++N+ ++A + +T P+L ++G + +++L + ++ +A
Sbjct: 7 YNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNKPAI-FMDCGFHA 65
Query: 181 NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASY 240
+ + ++ + + + N+ G +
Sbjct: 66 REWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFY--------VLPVLNIDGYIYTWTK 117
Query: 241 PFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVP------------EPETLA 288
K S D NRNF + + ++ P E ET A
Sbjct: 118 NRMWRKTR----STNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAESEKETKA 173
Query: 289 VEKWLQDIP--FVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAH 346
+ ++++ +H S + YPY + +++ LA +
Sbjct: 174 LADFIRNNLSSIKAYLTIHSYSQMILYPYSYD-------YKLPENNAELNNLAKAAVKEL 226
Query: 347 KKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLEL---GCYKF- 402
+Y Y +GG D+ Y T EL G Y F
Sbjct: 227 ATLYG----------TKYTYGPGATTIYPAAGGSDDWAYDQGIKYSFTFELRDKGRYGFI 276
Query: 403 PPAKDLPSYWEDNLPALLSYIEQV 426
P + + E+ + A+ V
Sbjct: 277 LPESQIQATCEETMLAIKYVTNYV 300
Score = 75.6 bits (185), Expect = 1e-15
Identities = 31/223 (13%), Positives = 64/223 (28%), Gaps = 29/223 (13%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQ--GGGTNKNKVSIISLYRL 92
Y +++ + + +NP + +IG + +++ L+ G NK + + +
Sbjct: 6 KYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNKPAIFMDCGFHA 65
Query: 93 VTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSVE 152
+ Q+ H+T+ L +++
Sbjct: 66 REWISHAF----------------CQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNID 109
Query: 153 KRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFD-----SSSERREQPLNVK 207
G D NRNF + + +
Sbjct: 110 GYIYTWTKNRM----WRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAA 165
Query: 208 KLEPETLAMISFIKNNP--FVLSGNLHGGAIVASYPFDDSKCL 248
+ E ET A+ FI+NN +H + + YP+ L
Sbjct: 166 ESEKETKALADFIRNNLSSIKAYLTIHSYSQMILYPYSYDYKL 208
>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm
(Helicoverpa zea) [TaxId: 7113]}
Length = 312
Score = 112 bits (281), Expect = 4e-28
Identities = 44/327 (13%), Positives = 94/327 (28%), Gaps = 48/327 (14%)
Query: 122 HNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNAN 181
+ L++I + YP++ + + +S E R + + + N
Sbjct: 7 QELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFE---------DENKP 57
Query: 182 GVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVL--SGNLHGGAIVAS 239
+ ++ + S E + ++ ++L N G +
Sbjct: 58 VIFIDGGIHAREWISPP---SVTWAIHKLVEDVTENDLLEKFDWILLPVVNPDGYKYTFT 114
Query: 240 YPFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVP------------EPETL 287
K ++ + D NRNF + ++ P E ET
Sbjct: 115 NERFWRKT-RSTNNNPLSQICRGADGNRNFDFVWNSIGTSNSPCSDIYAGTSAFSEVETR 173
Query: 288 AVEKWLQDIP--FVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANA 345
V L + L +H + YP+ + S + + + + A+
Sbjct: 174 VVRDILHEHLARMALYLTMHSFGSMILYPWGHD-------GSLSQNALGLHTVGVAMASV 226
Query: 346 HKKMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLEL-----GCY 400
+ P + G Y ++G +DY + L T EL G
Sbjct: 227 IQSNALPNFPP------YTVGNSALVIGYYIAGSSEDYAHSIGVPLSYTYELPGLSSGWD 280
Query: 401 KF-PPAKDLPSYWEDNLPALLSYIEQV 426
F P + + + ++ +
Sbjct: 281 GFHLPPQYIEQVCRETWEGIVVGARRA 307
Score = 80.2 bits (197), Expect = 5e-17
Identities = 25/224 (11%), Positives = 58/224 (25%), Gaps = 29/224 (12%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQ---GGGTNKNKVSIISLYR 91
+Y + + ++L ++ P + + +S + R + ++ ++NK I
Sbjct: 5 NYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDENKPVIFIDGG 64
Query: 92 LVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSV 151
+ P + + + + +
Sbjct: 65 IHAREWIS---------------PPSVTWAIHKLVEDVTENDLLEKF----DWILLPVVN 105
Query: 152 EKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVKK--- 208
+ S G D NRNF ++S ++
Sbjct: 106 PDGYKYTFTNERFWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNSPCSDIYAGTS 165
Query: 209 --LEPETLAMISFIKNNP--FVLSGNLHGGAIVASYPFDDSKCL 248
E ET + + + L +H + YP+ L
Sbjct: 166 AFSEVETRVVRDILHEHLARMALYLTMHSFGSMILYPWGHDGSL 209
>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm
(Helicoverpa armigera) [TaxId: 29058]}
Length = 317
Score = 101 bits (251), Expect = 5e-24
Identities = 51/327 (15%), Positives = 93/327 (28%), Gaps = 48/327 (14%)
Query: 121 HHNYTQMQAELEHITKNYPNLTRLYSVGQSVEKRELWVLVYNDEEGSCNSLARFVGRNNA 180
H+Y ++ A L+ + K +PN+ + G+S E R + L + S + ++
Sbjct: 12 IHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDASKPVVMMQSLL 71
Query: 181 NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASY 240
+ + + + + L P N G
Sbjct: 72 HCREWV--TLPATLYAIHKLVIDVTESDLINNID-----WIILPVA---NPDGYVHTFGG 121
Query: 241 PFDDSKCLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVP-----------EPETLAV 289
K + + VDLNRNF +G + +SV EPE+ +
Sbjct: 122 DRYWRK--NRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSAFSEPESSVI 179
Query: 290 EKWLQDI--PFVLSANLHGGSLVANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAHK 347
+ + L ++H + Y Y + + L+ A A
Sbjct: 180 RDIIAEHRNRMALYLDIHSFGSMILYGYGNGV--------LPSNALQLHLIGVQMAQAID 231
Query: 348 KMYKDPGCPEYPEENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYK------ 401
++ +Y N + Y SGG DY A T EL Y+
Sbjct: 232 RVKWSSN-KDYIVGNIFHVL------YAASGGASDYAMQAAAPFSYTYELPAYRNSVWFD 284
Query: 402 --FPPAKDLPSYWEDNLPALLSYIEQV 426
+ + +
Sbjct: 285 GFLVDPDFIEQAGFETWEGIKVGARAA 311
Score = 79.1 bits (194), Expect = 1e-16
Identities = 39/249 (15%), Positives = 76/249 (30%), Gaps = 31/249 (12%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQ---GGGTNKNKVSIISLYR 91
S++E+ +L A++ P+ V + GKS + R + L+ + +K ++
Sbjct: 11 KIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDASKPVVMMQSL 70
Query: 92 LVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQSV 151
L P + + T+ P
Sbjct: 71 LHCREWVTLPATLYA----------IHKLVIDVTESDLINNIDWIILPVAN--------- 111
Query: 152 EKRELWVLVYNDEEGSCNSLARFVGRNNANGVDLNRNFPDQFDSSSERREQPLNVK---- 207
D N ++ N GVDLNRNF + ++S
Sbjct: 112 -PDGYVHTFGGDRYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSA 170
Query: 208 KLEPETLAMISFIKNN--PFVLSGNLHGGAIVASYPFDDSKCLGDRSSM--IGRKNAHDV 263
EPE+ + I + L ++H + Y + + + + IG + A +
Sbjct: 171 FSEPESSVIRDIIAEHRNRMALYLDIHSFGSMILYGYGNGVLPSNALQLHLIGVQMAQAI 230
Query: 264 DLNRNFPGQ 272
D + +
Sbjct: 231 DRVKWSSNK 239
>d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain
{Crested duck (Lophonetta specularioides) [TaxId: 8836]}
Length = 79
Score = 56.4 bits (135), Expect = 8e-11
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 429 GVAGFVKGRE-GEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAIH 487
G+ GFV G G+ A+I+V + H V + +DGDYWRLL G Y + SA GY+P
Sbjct: 1 GIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVQGTYKVTASARGYDPVTK 60
Query: 488 QVSVENSTKATQLNITLAR 506
V V++ Q+N TL+R
Sbjct: 61 TVEVDSK-GGVQVNFTLSR 78
>d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 51.0 bits (121), Expect = 1e-08
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 429 GVAGFVKGREGEGVAGASIAVEGL--GHVVYSAQDGDYWRLLAPGNYTLHVSAPGYEPAI 486
GV G V + G + + V+ + + G+Y+ LL PG+Y ++V+ PG++P I
Sbjct: 1 GVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHDPHI 60
Query: 487 HQVSVENSTK---ATQLNITL 504
+V + ++ A + +I L
Sbjct: 61 TKVIIPEKSQNFSALKKDILL 81
>d1vlfn1 b.3.5.1 (N:196-274) Transhydroxylase beta subunit, BthL,
C-terminal domain {Pelobacter acidigallici [TaxId:
35816]}
Length = 79
Score = 33.1 bits (75), Expect = 0.010
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 430 VAGFVKGREGEGVAGASIAVEGLGHVVYSAQ---DGDYW-RLLAPGNYTLHVSAPGYEPA 485
AG + +G+ GA + ++ G V SA+ G++ L G YT+ + A G +
Sbjct: 5 TAGIL--VQGDCFEGAKVVLKSGGKEVASAETNFFGEFKFDALDNGEYTVEIDADGKSYS 62
Query: 486 IHQVSVENST 495
V + S
Sbjct: 63 DTVVIDDKSV 72
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain
{Escherichia coli [TaxId: 562]}
Length = 76
Score = 26.9 bits (59), Expect = 1.5
Identities = 6/70 (8%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Query: 90 YRLVTVSTTPAPIEEDIKKNKYGFIIPVQFSHHNYTQMQAELEHITKNYPNLTRLYSVGQ 149
+ L + + + ++ + + QAE + + + + +
Sbjct: 4 FTLFGLPARYQLDTQALSL-RFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLR 62
Query: 150 SVEKRELWVL 159
R ++L
Sbjct: 63 HPLMRAEYLL 72
>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 234
Score = 28.6 bits (63), Expect = 1.6
Identities = 14/64 (21%), Positives = 19/64 (29%), Gaps = 3/64 (4%)
Query: 428 RGVAGFVK---GREGEGVAGASIAVEGLGHVVYSAQDGDYWRLLAPGNYTLHVSAPGYEP 484
RGV G A++AV+G G+V A L + Y P
Sbjct: 12 RGVKVCAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNP 71
Query: 485 AIHQ 488
Sbjct: 72 EGFD 75
>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium
symbiosum [TaxId: 1512]}
Length = 255
Score = 28.1 bits (62), Expect = 2.4
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 428 RGVAGFVK---GREGEGVAGASIAVEGLGHVVYSA 459
G +V+ E + + G ++A+ G G+V + A
Sbjct: 17 YGSVYYVEAVMKHENDTLVGKTVALAGFGNVAWGA 51
>d1q1la_ d.258.1.1 (A:) Chorismate synthase, AroC {Aquifex aeolicus
[TaxId: 63363]}
Length = 397
Score = 28.0 bits (62), Expect = 3.2
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 3/78 (3%)
Query: 389 NTLEITLELGCYKFPPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKGREGEGVAGASIA 448
+L E+ PP W+ + ++ + + G G G A
Sbjct: 221 ESLGGVFEVFALNVPPGLGSHIQWDRRIDGRIAQAMMSIQAIKGV---EIGLGFEAARRF 277
Query: 449 VEGLGHVVYSAQDGDYWR 466
+ + ++ Y+R
Sbjct: 278 GSQVHDEIGWSEGKGYFR 295
>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum
islandicum [TaxId: 2277]}
Length = 242
Score = 27.8 bits (61), Expect = 3.4
Identities = 9/35 (25%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 428 RGVAGFVKG---REGEGVAGASIAVEGLGHVVYSA 459
GVA + + G+ G ++A++G+G+V
Sbjct: 12 FGVAVATREMAKKLWGGIEGKTVAIQGMGNVGRWT 46
>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase
{Rhodococcus sp., M4 [TaxId: 1831]}
Length = 201
Score = 27.4 bits (60), Expect = 3.9
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 426 VHRGVAGFVKGREGEGVAGASIAVEGLGHVVYSA 459
V + V R + G ++ V+GLG V S
Sbjct: 9 VFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSL 42
>d1qxoa_ d.258.1.1 (A:) Chorismate synthase, AroC {Streptococcus
pneumoniae [TaxId: 1313]}
Length = 388
Score = 27.6 bits (61), Expect = 4.5
Identities = 10/55 (18%), Positives = 15/55 (27%)
Query: 382 DYNYIHANTLEITLELGCYKFPPAKDLPSYWEDNLPALLSYIEQVHRGVAGFVKG 436
D +T+ +E P W+ L A L+ G G
Sbjct: 205 DQIKRDGDTIGGVVETVVGGVPVGLGSYVQWDRKLDARLAQAVVSINAFKGVEFG 259
>d1yw6a1 c.56.5.7 (A:1-322) Succinylglutamate desuccinylase AstE
{Escherichia coli [TaxId: 562]}
Length = 322
Score = 27.7 bits (61), Expect = 4.7
Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 181 NGVDLNRNFPDQFDSSSERREQPLNVKKLEPETLAMISFIKNNPFVLSGNLHGGAIVASY 240
D+NR F ++ +E E ++LE K + +LH + +
Sbjct: 98 CHSDMNRMFGGRWQLFAESGETCR-ARELEQCLEDFYDQGKESVRWH-LDLHTAIRGSLH 155
Query: 241 PF 242
P
Sbjct: 156 PQ 157
>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus
sphaericus [TaxId: 1421]}
Length = 230
Score = 27.3 bits (60), Expect = 4.9
Identities = 9/37 (24%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
Query: 428 RGVAGFVKG-----REGEGVAGASIAVEGLGHVVYSA 459
GV +K + + G +++V+GLG+V +
Sbjct: 18 YGVYRGMKAAAKEAFGSDSLEGLAVSVQGLGNVAKAL 54
>d2g9da1 c.56.5.7 (A:3-342) Succinylglutamate desuccinylase AstE
{Vibrio cholerae [TaxId: 666]}
Length = 340
Score = 27.3 bits (60), Expect = 6.2
Identities = 20/234 (8%), Positives = 56/234 (23%), Gaps = 24/234 (10%)
Query: 247 CLGDRSSMIGRKNAHDVDLNRNFPGQFGPSKYNSVPEPETLAVEKWLQDIPFVLSANLHG 306
+ + + + +LNR F + E + + +
Sbjct: 92 IMAHPQATVRHVRFIEQNLNRLFDDKPHTPST------ELAIADNLKVLLRQFFANTDEH 145
Query: 307 GSL------VANYPYDDNQAMKPQVDSPTPDDSIFKLLASSYANAHKKMYKDPGCPEYPE 360
+ A+ P+ P S+ + + ++ A M + +
Sbjct: 146 SRWHLDLHCAIRGSKHYSFAVSPKARHPVRSRSLMQFIEQAHIEA--VMLSNAPSSTFSW 203
Query: 361 ENFPGGIVNGAQWYVVSGGMQDYNYIHANTLEITLELGCYKFPPAKDLPSYWEDNLPALL 420
+ + N + + +L ++ +
Sbjct: 204 YSAEHYAAQALTLELGQVARLGENLLDRL---LAFDLAMRDLISRHKPEHLPRKSVMYRV 260
Query: 421 SYIEQVHRGVAGFVKGREGEG----VAGASIAVEGLGHVVYSAQDGDYWRLLAP 470
S F + E + G +G + + +G+ ++ P
Sbjct: 261 SRTIVRLHDDFDFRFSDDVENFTAFMHGEVFGHDG-DKPLMAKNEGEA--IVFP 311
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 26.8 bits (59), Expect = 6.3
Identities = 6/31 (19%), Positives = 15/31 (48%)
Query: 130 ELEHITKNYPNLTRLYSVGQSVEKRELWVLV 160
+L+++TK + + + + + E V V
Sbjct: 2 QLQNVTKAWGEVVVSKDINLDIHEGEFVVFV 32
>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 239
Score = 26.7 bits (58), Expect = 7.6
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 428 RGVAGFV----KGREGEGVAGASIAVEGLGHVVYSAQDGDYWRL 467
RG + + K + + G +IA++G G+ Y
Sbjct: 12 RGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDF 55
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.133 0.402
Gapped
Lambda K H
0.267 0.0548 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,261,929
Number of extensions: 106113
Number of successful extensions: 319
Number of sequences better than 10.0: 1
Number of HSP's gapped: 276
Number of HSP's successfully gapped: 40
Length of query: 608
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 517
Effective length of database: 1,158,166
Effective search space: 598771822
Effective search space used: 598771822
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (25.8 bits)