RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7680
(102 letters)
>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces
vulgaris [TaxId: 2026]}
Length = 323
Score = 70.7 bits (172), Expect = 2e-16
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
Y +++E+ + A P+ VK SIGKS + R+LWA++IS NV + N +P Y
Sbjct: 8 GYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN--EPEVLYT 65
Query: 95 ANIHGDEV 102
A H E
Sbjct: 66 ALHHAREH 73
>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId:
9913]}
Length = 307
Score = 67.9 bits (165), Expect = 1e-15
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
Y + DE+ F+ ++P V IG+S + R ++ L+ S ++ +P
Sbjct: 11 TYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSN-----RPAIWID 65
Query: 95 ANIHGDEV 102
IH E
Sbjct: 66 LGIHSREW 73
>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm
(Helicoverpa zea) [TaxId: 7113]}
Length = 312
Score = 67.9 bits (165), Expect = 2e-15
Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
+Y + + ++L ++ P + + +S + R + ++IS N KP+
Sbjct: 5 NYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDEN--KPVIFID 62
Query: 95 ANIHGDE 101
IH E
Sbjct: 63 GGIHARE 69
>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 296
Score = 66.4 bits (161), Expect = 4e-15
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
Y + + FL AQ S LHSIGKSV+ R+LW L + R + P FKYVA
Sbjct: 5 YHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRF-PKEHRIGIPEFKYVA 63
Query: 96 NIHGDE 101
N+HGDE
Sbjct: 64 NMHGDE 69
>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm
(Helicoverpa armigera) [TaxId: 29058]}
Length = 317
Score = 66.4 bits (161), Expect = 5e-15
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
S++E+ +L A++ P+ V + GKS + R + L+IS + KP+
Sbjct: 11 KIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDAS--KPVVMMQ 68
Query: 95 ANIHGDEV 102
+ +H E
Sbjct: 69 SLLHCREW 76
>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain
{Crested duck (Lophonetta specularioides) [TaxId: 8836]}
Length = 301
Score = 66.1 bits (160), Expect = 6e-15
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 36 YLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVA 95
+ F ++ FL A + PS +L+S+GKSV+ R+L+ ++IS N +P FKY+
Sbjct: 10 HHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDN-PGIHEAGEPEFKYIG 68
Query: 96 NIHGDEV 102
N+HG+EV
Sbjct: 69 NMHGNEV 75
>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 305
Score = 64.5 bits (156), Expect = 3e-14
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
Y S + + + A P + IG S +NR ++ L+ S +G+ + +P
Sbjct: 8 AYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFS----TGKGVRRPAVWLN 63
Query: 95 ANIHGDEV 102
A IH E
Sbjct: 64 AGIHSREW 71
>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 304
Score = 64.1 bits (155), Expect = 3e-14
Identities = 10/68 (14%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
Y +++ + + +NP + +IG + +++ L++ + + KP
Sbjct: 6 KYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPN-----KPAIFMD 60
Query: 95 ANIHGDEV 102
H E
Sbjct: 61 CGFHAREW 68
>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 307
Score = 63.7 bits (154), Expect = 4e-14
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 35 HYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYV 94
Y + +E+++ + ++P V +IG S +NR + L+ S KP
Sbjct: 10 AYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGD------KPAIWLD 63
Query: 95 ANIHGDEV 102
A IH E
Sbjct: 64 AGIHAREW 71
>d1u5ua_ e.5.1.2 (A:) Allene oxide synthase-lipoxygenase protein,
N-terminal domain {Black sea rod (Plexaura homomalla)
[TaxId: 47982]}
Length = 366
Score = 24.2 bits (52), Expect = 4.2
Identities = 3/33 (9%), Positives = 9/33 (27%)
Query: 14 WVGCTTPVLVNNDPEPFLENPHYLSFDELTKFL 46
V T + + + D +++
Sbjct: 132 IVMNTGEANIFWNSPSLEDFVPVEEGDAAEEYV 164
>d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 354
Score = 23.9 bits (51), Expect = 4.4
Identities = 6/34 (17%), Positives = 14/34 (41%)
Query: 12 LCWVGCTTPVLVNNDPEPFLENPHYLSFDELTKF 45
+P++V+ + F + P + +KF
Sbjct: 316 WVRNFVDSPIIVDITKDTFYKQPMFYHLGHFSKF 349
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 23.4 bits (49), Expect = 5.5
Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 58 KLHSIGKSVQNRDLWALQISRNVASGRNLLKPMFKYVANIHGD 100
KLHS+ ++V+ RD++ L + A G +L + + + +
Sbjct: 6 KLHSLCEAVKTRDIFGLL--QAYADGVDLTEKIPLANGHEPDE 46
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 327
Score = 23.6 bits (50), Expect = 5.8
Identities = 6/61 (9%), Positives = 18/61 (29%)
Query: 22 LVNNDPEPFLENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVA 81
L + + + N + + + + ++ P L S+G + +
Sbjct: 42 LRGENLQAYSMNENLDIYKHQFSEVTSLKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLE 101
Query: 82 S 82
Sbjct: 102 G 102
>d1p80a2 e.5.1.1 (A:27-597) Catalase II {Escherichia coli, HPII
[TaxId: 562]}
Length = 571
Score = 23.8 bits (51), Expect = 6.2
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 14 WVGCTTPVLVNNDPEPFLENPH 35
VG TP+ D F + H
Sbjct: 172 LVGNNTPIFFIQDAHKFPDFVH 193
>d1q88a_ e.47.1.1 (A:) 39 kda initiator binding protein, IBP39,
C-terminal domains {Trichomonas vaginalis [TaxId: 5722]}
Length = 192
Score = 23.4 bits (50), Expect = 6.7
Identities = 10/65 (15%), Positives = 20/65 (30%)
Query: 32 ENPHYLSFDELTKFLVAAAQQNPSKVKLHSIGKSVQNRDLWALQISRNVASGRNLLKPMF 91
+ S +L KFL +K+ S+ N+ W + + N +
Sbjct: 67 QEEQTKSKADLYKFLAMFGPYETIMLKIASLLLISNNKGHWLTFDPQAEKNANNQRDSIS 126
Query: 92 KYVAN 96
+
Sbjct: 127 GWFDQ 131
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 23.6 bits (50), Expect = 6.9
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 22 LVNNDPEPFLENPHYLSFDELTKFLVAAAQ 51
L+ P E +++FD K + AA
Sbjct: 30 LIKRTEIPQDEPISWMTFDHERKNIYGAAM 59
>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 170
Score = 22.7 bits (48), Expect = 9.8
Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 2/37 (5%)
Query: 26 DPEPFLENPHYLSFDELTKFLVAA--AQQNPSKVKLH 60
+P LS + + FL + K+ LH
Sbjct: 134 EPSGINAQRGQLSPEGMVWFLCGPENSVLAQDKLLLH 170
>d1dgfa_ e.5.1.1 (A:) Catalase I {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 22.9 bits (49), Expect = 9.9
Identities = 8/22 (36%), Positives = 9/22 (40%)
Query: 14 WVGCTTPVLVNNDPEPFLENPH 35
VG TP+ DP F H
Sbjct: 141 LVGNNTPIFFIRDPILFPSFIH 162
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.419
Gapped
Lambda K H
0.267 0.0543 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 366,523
Number of extensions: 13595
Number of successful extensions: 59
Number of sequences better than 10.0: 1
Number of HSP's gapped: 59
Number of HSP's successfully gapped: 21
Length of query: 102
Length of database: 2,407,596
Length adjustment: 63
Effective length of query: 39
Effective length of database: 1,542,606
Effective search space: 60161634
Effective search space used: 60161634
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.3 bits)