BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7682
(383 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242019472|ref|XP_002430185.1| Neuronal PAS domain-containing protein, putative [Pediculus humanus
corporis]
gi|212515276|gb|EEB17447.1| Neuronal PAS domain-containing protein, putative [Pediculus humanus
corporis]
Length = 363
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 193/292 (66%), Gaps = 44/292 (15%)
Query: 49 TVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ 108
+ N+CLNEKRRREQEN YIEELAELISA SFA+ MSSL+VKPDKCAILQETVNQIR+IKQ
Sbjct: 12 SFNKCLNEKRRREQENIYIEELAELISA-SFAD-MSSLSVKPDKCAILQETVNQIRHIKQ 69
Query: 109 QETSSD--AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
QE S AVQQGEVSSS PTV+ NEV GPLLLEAL+GFLF+VN +G + F T+N+ FI
Sbjct: 70 QENCSGDAAVQQGEVSSSNPTVLRNEVFGPLLLEALDGFLFIVNLEGKIEFVTDNVHQFI 129
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRT 226
++++ ++ GKS+YN+IHHGDHARF + L+P + W P RT
Sbjct: 130 KFTKDDLFGKSIYNIIHHGDHARFSSSLLPMTI---GW-----------PEPNPQNSRRT 175
Query: 227 FNIRLLIS--------------------STHLTAGLSRAGGENGQDDSGDVSSE----GG 262
FN RLLI + + + E G DS DV+SE G
Sbjct: 176 FNCRLLIKPPDDQEETMEEKQQRISKYENMQIQCTQVQLNKEKG--DSDDVTSESSEIGS 233
Query: 263 PCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQTHTQYLNK 314
LMCVARRIP +K + PIEQFTMKLD SG IIG+DT GVS T++QYLNK
Sbjct: 234 GTLMCVARRIPQNEKSVGTPIEQFTMKLDTSGKIIGIDTIGVSATYSQYLNK 285
>gi|270007579|gb|EFA04027.1| hypothetical protein TcasGA2_TC014256 [Tribolium castaneum]
Length = 1460
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/315 (51%), Positives = 204/315 (64%), Gaps = 59/315 (18%)
Query: 33 MSSLAVKPDKCAILQET-----VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLA 87
MS+LA +K ET +N+C NEKRRREQEN YIEELAELISA +FA+ MSSL+
Sbjct: 1 MSALATGVNKKRKKSETKPQAQINKCNNEKRRREQENIYIEELAELISA-NFAD-MSSLS 58
Query: 88 VKPDKCAILQETVNQIRNIKQQET---SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEG 144
VKPDKCAILQETVNQIR+IKQ+E+ SSD VQQGEVSSS+PT+++NEV GPLLLEALEG
Sbjct: 59 VKPDKCAILQETVNQIRSIKQRESASQSSDPVQQGEVSSSRPTILSNEVYGPLLLEALEG 118
Query: 145 FLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAW 204
FLFVVN +G V TEN+ ++I+++R E+ G S+YN IH GDHARF L+P + W
Sbjct: 119 FLFVVNAEGKVEHVTENVSNYIKFTRDEIFGNSIYNFIHLGDHARFTTSLMP----MIGW 174
Query: 205 TSDSGGQAGKRPSLTASTPNRTFNIRLL-------------------------ISSTHLT 239
S+S T +T +R+F++R L ISST L
Sbjct: 175 GSES----------TTTTRSRSFSVRFLVKPPDDQDETVEEKQQRVNCYELMHISSTQLR 224
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
+S + DD G ++ GP L+CVA RI DK +S IEQFT KLD SG IIG+
Sbjct: 225 DQVSVS------DDDG---ADSGPYLLCVASRISHRDKVISG-IEQFTTKLDTSGKIIGV 274
Query: 300 DTSGVSQTHTQYLNK 314
D SGVS ++Q++NK
Sbjct: 275 DASGVSAPYSQFINK 289
>gi|91082795|ref|XP_967666.1| PREDICTED: similar to transcriptional intermediary factor 2
[Tribolium castaneum]
Length = 1504
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 162/315 (51%), Positives = 204/315 (64%), Gaps = 59/315 (18%)
Query: 33 MSSLAVKPDKCAILQET-----VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLA 87
MS+LA +K ET +N+C NEKRRREQEN YIEELAELISA +FA+ MSSL+
Sbjct: 141 MSALATGVNKKRKKSETKPQAQINKCNNEKRRREQENIYIEELAELISA-NFAD-MSSLS 198
Query: 88 VKPDKCAILQETVNQIRNIKQQET---SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEG 144
VKPDKCAILQETVNQIR+IKQ+E+ SSD VQQGEVSSS+PT+++NEV GPLLLEALEG
Sbjct: 199 VKPDKCAILQETVNQIRSIKQRESASQSSDPVQQGEVSSSRPTILSNEVYGPLLLEALEG 258
Query: 145 FLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAW 204
FLFVVN +G V TEN+ ++I+++R E+ G S+YN IH GDHARF L+P + W
Sbjct: 259 FLFVVNAEGKVEHVTENVSNYIKFTRDEIFGNSIYNFIHLGDHARFTTSLMP----MIGW 314
Query: 205 TSDSGGQAGKRPSLTASTPNRTFNIRLL-------------------------ISSTHLT 239
S+S T +T +R+F++R L ISST L
Sbjct: 315 GSES----------TTTTRSRSFSVRFLVKPPDDQDETVEEKQQRVNCYELMHISSTQLR 364
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
+S + DD G ++ GP L+CVA RI DK +S IEQFT KLD SG IIG+
Sbjct: 365 DQVSVS------DDDG---ADSGPYLLCVASRISHRDKVISG-IEQFTTKLDTSGKIIGV 414
Query: 300 DTSGVSQTHTQYLNK 314
D SGVS ++Q++NK
Sbjct: 415 DASGVSAPYSQFINK 429
>gi|241244650|ref|XP_002402360.1| nuclear receptor coactivator, putative [Ixodes scapularis]
gi|215496326|gb|EEC05966.1| nuclear receptor coactivator, putative [Ixodes scapularis]
Length = 1337
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/291 (51%), Positives = 194/291 (66%), Gaps = 28/291 (9%)
Query: 52 QCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQET 111
+CLNEK RREQEN Y+EELAELISA+ M+SL+VKPDKCAILQETVNQIR IKQQE+
Sbjct: 22 KCLNEKHRREQENIYLEELAELISAS--ISDMNSLSVKPDKCAILQETVNQIRRIKQQES 79
Query: 112 S-SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSR 170
SD +QQ EVSSSKPT++ ++VLGPLLLEAL+GFLFVVN DG + F +ENI SFI+Y++
Sbjct: 80 GQSDDLQQSEVSSSKPTILGSDVLGPLLLEALDGFLFVVNTDGKIEFVSENITSFIKYTQ 139
Query: 171 QEVLGKSVYNLIHHGDHARFHNCLVPSS-HQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
++ GKS+YN+IHHGDH RF + L+P S WTSD A P S +R+F+
Sbjct: 140 DDLDGKSIYNIIHHGDHGRFSSNLLPMSIGNGFGWTSDLAPPALALPGGPNSK-SRSFHC 198
Query: 230 RLLIS--------------------STHLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVA 269
R L+ + H++A G+ + + D SE CL+CVA
Sbjct: 199 RFLVKPPDAAEETVEEKQTRISQYENMHISAIFLPYPGD--KSEGTDSESEVQNCLVCVA 256
Query: 270 RRIPPTDK-QLSAPIEQFTMKLDRSGTIIGMDTSGVSQTHTQYLNKAVACK 319
RRIP +K S +EQFT +LD SG I+ +DTSGVS T++QYLNK++ +
Sbjct: 257 RRIPANEKIPSSVGVEQFTTRLDLSGKILAVDTSGVSSTYSQYLNKSLVGR 307
>gi|427796185|gb|JAA63544.1| Putative transcriptional intermediary factor 2, partial
[Rhipicephalus pulchellus]
Length = 1504
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 149/301 (49%), Positives = 195/301 (64%), Gaps = 25/301 (8%)
Query: 39 KPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQE 98
KP K + +CLNEK RREQEN Y+EELAELISA+ M+SL+VKPDKCAILQE
Sbjct: 27 KPGKMMLPVLARKKCLNEKHRREQENVYLEELAELISAS--LSDMNSLSVKPDKCAILQE 84
Query: 99 TVNQIRNIKQQETSSDA----VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGY 154
TVNQIR IKQQE S +QQ EVSSSKPT++ ++VLGPLLLEAL+GFLFVVN +G
Sbjct: 85 TVNQIRRIKQQEASGGGGLGELQQSEVSSSKPTILGSDVLGPLLLEALDGFLFVVNTEGR 144
Query: 155 VNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQA 212
+ F +EN+ SF++Y + E+ G S+YN++HHGDH RF + L+P S N WT ++GG++
Sbjct: 145 IEFVSENVSSFLQYGQGELDGTSIYNILHHGDHGRFSSNLLPMSLGANGLGWT-EAGGKS 203
Query: 213 GK-------RPSLTASTPNRTFNIRLLISSTHLTA------GLSRAGGENGQDDSGDVSS 259
RP A + + L + H++A S GG D+SG S
Sbjct: 204 RSFQCRFLLRPP-DAEDKQNSARVAPLYENMHISAIFLPYPNGSGTGGAGSGDESG-ADS 261
Query: 260 EGGPCLMCVARRIPPTDK-QLSAPIEQFTMKLDRSGTIIGMDTSGVSQTHTQYLNKAVAC 318
E CL+CVARRIP +K S +EQFT +LD G I+ +DTSGVS T++QYLNK++
Sbjct: 262 EVQNCLVCVARRIPANEKIPASVGVEQFTTRLDLVGKILAVDTSGVSSTYSQYLNKSLVG 321
Query: 319 K 319
+
Sbjct: 322 R 322
>gi|328782966|ref|XP_394114.4| PREDICTED: hypothetical protein LOC410637 [Apis mellifera]
Length = 1617
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/290 (48%), Positives = 186/290 (64%), Gaps = 42/290 (14%)
Query: 47 QETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNI 106
Q +N+CLNEKRRR QEN +I+ELAELISA + K DKC ILQ TV+QIR+I
Sbjct: 43 QSQINKCLNEKRRRNQENLFIDELAELISATDMSSG------KTDKCQILQRTVDQIRHI 96
Query: 107 KQQETS-SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSF 165
++QE S S AVQQGEVSSS P +++N+ +GP+LLEAL+GFLFVVN +G V + T+NI +
Sbjct: 97 REQEGSNSHAVQQGEVSSSNPNILSNDQVGPILLEALDGFLFVVNTEGRVEYVTDNITQY 156
Query: 166 IRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNR 225
I Y++ +VLGK +YN+IHHGDH F L+P Q+ WT++ Q +R NR
Sbjct: 157 INYTKDDVLGKDIYNIIHHGDHNTFMPSLLP--MQL-GWTNE---QQPQR--------NR 202
Query: 226 TFNIRLLIS----------------STHLTAGLSRAGGENGQD--DSGDVSSE---GGPC 264
TFN R L+ S + + + A N D +SGDVSSE GPC
Sbjct: 203 TFNCRFLVKPPDDKEETMEEKQQRVSKYESMQICSALLPNNSDRLESGDVSSESSDNGPC 262
Query: 265 LMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQTHTQYLNK 314
+MCVARRIPP +K + PIEQFT+KLD +G II +D +S +++YL+K
Sbjct: 263 VMCVARRIPPNEKPIGTPIEQFTVKLDTTGKIIAVDVIWLSSPYSEYLSK 312
>gi|340723192|ref|XP_003399979.1| PREDICTED: hypothetical protein LOC100648067 [Bombus terrestris]
Length = 1594
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 139/290 (47%), Positives = 184/290 (63%), Gaps = 42/290 (14%)
Query: 47 QETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNI 106
Q +N+CLNEKRRR QEN +I+ELAELISA + K DKC ILQ TV+QIR+I
Sbjct: 37 QSQINKCLNEKRRRNQENLFIDELAELISATDMSSG------KTDKCQILQRTVDQIRHI 90
Query: 107 KQQETS-SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSF 165
++QE S S AVQQGEVSSS P +++N+ +GP+LLEAL+GFLFVVN +G V + T+NI +
Sbjct: 91 REQEGSNSHAVQQGEVSSSNPNILSNDQVGPILLEALDGFLFVVNTEGRVEYVTDNITQY 150
Query: 166 IRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNR 225
I Y++ +VLGK +YN+IHHGDH F L+P AW ++ Q +R NR
Sbjct: 151 INYTKDDVLGKDIYNIIHHGDHNTFMPSLLPIPL---AWMNE---QPPQR--------NR 196
Query: 226 TFNIRLLIS----------------STHLTAGLSRAGGENGQD--DSGDVSSE---GGPC 264
TFN R L+ S + + + A N D +SGDVSSE GPC
Sbjct: 197 TFNCRFLVKPPDDKEETMEEKQQRVSKYESMQICSALLPNNSDRLESGDVSSESSDNGPC 256
Query: 265 LMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQTHTQYLNK 314
+MCVARRIPP +K + PIEQFT+KLD +G II +D +S +++YL+K
Sbjct: 257 VMCVARRIPPNEKPIGTPIEQFTVKLDTTGKIIAVDVIWLSSPYSEYLSK 306
>gi|350418715|ref|XP_003491944.1| PREDICTED: hypothetical protein LOC100747735 [Bombus impatiens]
Length = 1606
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 139/290 (47%), Positives = 184/290 (63%), Gaps = 42/290 (14%)
Query: 47 QETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNI 106
Q +N+CLNEKRRR QEN +I+ELAELISA + K DKC ILQ TV+QIR+I
Sbjct: 37 QSQINKCLNEKRRRNQENLFIDELAELISATDMSSG------KTDKCQILQRTVDQIRHI 90
Query: 107 KQQETS-SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSF 165
++QE S S AVQQGEVSSS P +++N+ +GP+LLEAL+GFLFVVN +G V + T+NI +
Sbjct: 91 REQEGSNSHAVQQGEVSSSNPNILSNDQVGPILLEALDGFLFVVNTEGRVEYVTDNITQY 150
Query: 166 IRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNR 225
I Y++ +VLGK +YN+IHHGDH F L+P AW ++ Q +R NR
Sbjct: 151 INYTKDDVLGKDIYNIIHHGDHNTFMPSLLPIPL---AWMNE---QPPQR--------NR 196
Query: 226 TFNIRLLIS----------------STHLTAGLSRAGGENGQD--DSGDVSSE---GGPC 264
TFN R L+ S + + + A N D +SGDVSSE GPC
Sbjct: 197 TFNCRFLVKPPDDKEETMEEKQQRVSKYESMQICSALLPNNSDRLESGDVSSESSDNGPC 256
Query: 265 LMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQTHTQYLNK 314
+MCVARRIPP +K + PIEQFT+KLD +G II +D +S +++YL+K
Sbjct: 257 VMCVARRIPPNEKPIGTPIEQFTVKLDTTGKIIAVDVIWLSSPYSEYLSK 306
>gi|328711465|ref|XP_001944363.2| PREDICTED: hypothetical protein LOC100161757 isoform 1
[Acyrthosiphon pisum]
Length = 1437
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/305 (47%), Positives = 187/305 (61%), Gaps = 40/305 (13%)
Query: 47 QETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNI 106
Q +N+C NEKRRREQEN YIEELAELISA SFA+ M+SL+VKPDKCAILQETVNQ+R
Sbjct: 23 QSQLNKCRNEKRRREQENIYIEELAELISA-SFAD-MNSLSVKPDKCAILQETVNQVR-A 79
Query: 107 KQQETSSD----------AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVN 156
SSD AVQQGEVSSSKPT I+N L PLLL AL+GFLFVVN DG +
Sbjct: 80 GTHRLSSDQTESLISTEAAVQQGEVSSSKPTRISNTELAPLLLSALDGFLFVVNADGQIE 139
Query: 157 FCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF----HNCLVPSSHQVNAWTSDSGGQA 212
F TENI+ F+ Y+++E+LGKSVYN+IHHGDH +F +N L+ + + S+
Sbjct: 140 FVTENIQQFLHYNKEELLGKSVYNIIHHGDHTKFGVLLNNPLLIYDSPIGSLGSNVPTTP 199
Query: 213 GKRPSLTASTPN-------RTFNIRLLIS----------------STHLTAGLSRAGGEN 249
S + S N + FN RLLI S + T +S
Sbjct: 200 LMEQSPSGSKGNNWNQRFTKKFNCRLLIKPPSDQDQTIEEKQTRVSQYETLQISSTKING 259
Query: 250 GQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQTHT 309
G D D + L+C+ARR+P +K LS P+EQFT+KLD++G I+ +DT VS+ +
Sbjct: 260 GMVDDEDSTDGISQNLLCIARRVPYNEKHLSPPLEQFTIKLDQNGKILALDTKDVSEAYA 319
Query: 310 QYLNK 314
Q++NK
Sbjct: 320 QHINK 324
>gi|328711463|ref|XP_003244545.1| PREDICTED: hypothetical protein LOC100161757 isoform 2
[Acyrthosiphon pisum]
Length = 1395
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/308 (48%), Positives = 191/308 (62%), Gaps = 46/308 (14%)
Query: 47 QETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNI 106
Q +N+C NEKRRREQEN YIEELAELISA SFA+ M+SL+VKPDKCAILQETVNQ+R
Sbjct: 23 QSQLNKCRNEKRRREQENIYIEELAELISA-SFAD-MNSLSVKPDKCAILQETVNQVR-A 79
Query: 107 KQQETSSD----------AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVN 156
SSD AVQQGEVSSSKPT I+N L PLLL AL+GFLFVVN DG +
Sbjct: 80 GTHRLSSDQTESLISTEAAVQQGEVSSSKPTRISNTELAPLLLSALDGFLFVVNADGQIE 139
Query: 157 FCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF----HNCLVPSSHQVNAWTSDSGGQA 212
F TENI+ F+ Y+++E+LGKSVYN+IHHGDH +F +N L+ + + S+
Sbjct: 140 FVTENIQQFLHYNKEELLGKSVYNIIHHGDHTKFGVLLNNPLLIYDSPIGSLGSNVPTTP 199
Query: 213 GKRPSLTASTPN-------RTFNIRLLIS----------------STHLTAGLSRA---G 246
S + S N + FN RLLI S + T +S G
Sbjct: 200 LMEQSPSGSKGNNWNQRFTKKFNCRLLIKPPSDQDQTIEEKQTRVSQYETLQISSTKING 259
Query: 247 GENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQ 306
G +DS D S+ L+C+ARR+P +K LS P+EQFT+KLD++G I+ +DT VS+
Sbjct: 260 GMVDDEDSTDGISQN---LLCIARRVPYNEKHLSPPLEQFTIKLDQNGKILALDTKDVSE 316
Query: 307 THTQYLNK 314
+ Q++NK
Sbjct: 317 AYAQHINK 324
>gi|383863412|ref|XP_003707175.1| PREDICTED: uncharacterized protein LOC100877371 [Megachile
rotundata]
Length = 1700
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 141/293 (48%), Positives = 182/293 (62%), Gaps = 41/293 (13%)
Query: 44 AILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQI 103
A Q +N+CLNEKRRR QEN +I+ELAELIS + K DK ILQ TV+QI
Sbjct: 118 AKPQSQINKCLNEKRRRNQENLFIDELAELISVTDMSSG------KTDKRQILQRTVDQI 171
Query: 104 RNIKQQETS-SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENI 162
R+I+QQE S S AVQQGEVSSS P +++N+ +GP+LLEAL+GFLFVVN +G V + T+NI
Sbjct: 172 RHIRQQEGSNSHAVQQGEVSSSNPNILSNDQVGPILLEALDGFLFVVNTEGRVEYVTDNI 231
Query: 163 KSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTAST 222
+I Y++ +VLGK +YN+IHHGDH F L P S WTS+ Q T
Sbjct: 232 TQYINYTKDDVLGKDIYNIIHHGDHNIFMPSLCPVSL---GWTSEPQPQ----------T 278
Query: 223 PNRTFNIRLLIS----------------STHLTAGLSRAGGENGQD--DSGDVSSEG--- 261
NRTFN R L+ S + + + A + D +SGDVSSE
Sbjct: 279 RNRTFNCRFLVKPPDDKEETMEEKQQRVSKYESMQICSALLPSNSDRLESGDVSSESSDI 338
Query: 262 GPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQTHTQYLNK 314
GPC+MCVARRIPP +K + PIEQFT+KLD +G II +D S +S + +YL+K
Sbjct: 339 GPCVMCVARRIPPNEKPIGTPIEQFTVKLDTAGKIIAVDDSWLSPPYAKYLSK 391
>gi|291221108|ref|XP_002730568.1| PREDICTED: Neuronal PAS domain-containing protein, putative-like
[Saccoglossus kowalevskii]
Length = 1856
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 127/274 (46%), Positives = 171/274 (62%), Gaps = 34/274 (12%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE 110
N+ LNE+RRREQEN YIEELAELISA+ +M S VKPDKCAILQETV QI+ IK+Q+
Sbjct: 21 NKSLNERRRREQENIYIEELAELISAS--ITNMDSCNVKPDKCAILQETVKQIKTIKRQQ 78
Query: 111 T--SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
S+ AVQQ VSSSKP ++ N+VLGPLLLEAL+GFLFVVN G + F TEN+ +++++
Sbjct: 79 VAESNGAVQQCHVSSSKPALLANDVLGPLLLEALDGFLFVVNSQGRIEFVTENVSTYLKF 138
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFN 228
+ E++G S+Y+LIH GDHA+ CL+P ++ + W S++ + K +RTFN
Sbjct: 139 GKDELVGSSIYSLIHAGDHAQLTECLLPLTNGI-VWPSENPNKLSK---------SRTFN 188
Query: 229 IRLLISST---------------HL--TAGLSRAGGENGQDDSGDVSSEGGPCLMCVARR 271
R+ I S H+ +A L + + G S +G L+CVARR
Sbjct: 189 CRMYIGSQDEHGDDGGSQESKLEHMQCSAVLQPHPDDKQPNADGSASVDGPAYLVCVARR 248
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVS 305
+P D+ L IEQF K D SG II D S ++
Sbjct: 249 MPQEDRSL---IEQFVTKQDLSGKIISADISSLT 279
>gi|405968281|gb|EKC33363.1| Nuclear receptor coactivator 1 [Crassostrea gigas]
Length = 1736
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/279 (45%), Positives = 175/279 (62%), Gaps = 35/279 (12%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
+++CL+E+RRR+QEN Y EELAELISA+ MS+L+VKP+K AILQE++N+I+ +KQ+
Sbjct: 9 ISKCLHERRRRDQENAYFEELAELISAS--VTDMSALSVKPEKSAILQESLNKIKQLKQE 66
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+ SSDAVQQ +VSSSKP+V+ EVLGPLLLEAL+GFLFVVN G + F ++N+ +++YS
Sbjct: 67 KASSDAVQQSQVSSSKPSVLPTEVLGPLLLEALDGFLFVVNSQGKIEFVSDNVTEYLQYS 126
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSS-HQVNAWTSDSGGQAGKRPSLTASTPNRTFN 228
+ +++GKSVYN+IH GDH +F+ +P S + W SDS G RTFN
Sbjct: 127 QDDLIGKSVYNIIHIGDHDQFNYSYLPMSLGSLIPWPSDSTVAKG-----------RTFN 175
Query: 229 IRLLISST------------------HLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVAR 270
R+L+ +L GE D G SEG CL+C+AR
Sbjct: 176 CRMLVKPPYDENDDVETKQTYVSQYEYLQISAISQPGEKFSD--GAEHSEGLSCLVCIAR 233
Query: 271 RIPPTDKQLSA-PIEQFTMKLDRSGTIIGMDTSGVSQTH 308
R+ +K + IEQFT K D +G II DTSG+ + H
Sbjct: 234 RLSFNEKTNTMLGIEQFTTKQDINGKIISHDTSGIVRGH 272
>gi|345493588|ref|XP_003427101.1| PREDICTED: hypothetical protein LOC100680400 isoform 1 [Nasonia
vitripennis]
Length = 1612
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 176/309 (56%), Gaps = 62/309 (20%)
Query: 44 AILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQI 103
A Q +N+CLNEKRRR QEN +I+ELAELISA + K DKC ILQ TV QI
Sbjct: 40 AKPQSQINKCLNEKRRRTQENLFIDELAELISATDMSSG------KTDKCQILQRTVEQI 93
Query: 104 RNIKQQETS-SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENI 162
R+I S S AVQQGEVSSS P++++N+ +GP+LLEAL+GFLF+VN +G V + T+NI
Sbjct: 94 RHINTHTGSNSHAVQQGEVSSSNPSILSNDQVGPILLEALDGFLFIVNTEGRVEYVTDNI 153
Query: 163 KSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTAST 222
+I Y++ +VLGK +YN+IHHGDH F ++P S V W+S+ Q T
Sbjct: 154 TEYINYTKNDVLGKDIYNIIHHGDHNNFMPNILPMS--VAGWSSEPQTQ----------T 201
Query: 223 PNRTFNIRLLIS-------------------------STHLTAGLSRAGGENGQDDSG-- 255
NRTF R L+ S L + + +G E + G
Sbjct: 202 RNRTFECRFLVKPPDDKEETMEEKQQRVSKYETMQICSALLPSNGASSGSERLEPGGGSS 261
Query: 256 ---------DVSSEG---GPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSG 303
DVSSE GPC+MCVARRI +K+ I QFT+KLD G I+ +DT+
Sbjct: 262 AASNVVGGNDVSSEFSDIGPCVMCVARRISFDEKR----IGQFTLKLDTFGKIMAVDTNW 317
Query: 304 VSQTHTQYL 312
+S +++QYL
Sbjct: 318 LSPSYSQYL 326
>gi|345493590|ref|XP_003427102.1| PREDICTED: hypothetical protein LOC100680400 isoform 2 [Nasonia
vitripennis]
Length = 1574
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 176/309 (56%), Gaps = 62/309 (20%)
Query: 44 AILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQI 103
A Q +N+CLNEKRRR QEN +I+ELAELISA + K DKC ILQ TV QI
Sbjct: 40 AKPQSQINKCLNEKRRRTQENLFIDELAELISATDMSSG------KTDKCQILQRTVEQI 93
Query: 104 RNIKQQETS-SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENI 162
R+I S S AVQQGEVSSS P++++N+ +GP+LLEAL+GFLF+VN +G V + T+NI
Sbjct: 94 RHINTHTGSNSHAVQQGEVSSSNPSILSNDQVGPILLEALDGFLFIVNTEGRVEYVTDNI 153
Query: 163 KSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTAST 222
+I Y++ +VLGK +YN+IHHGDH F ++P S V W+S+ Q T
Sbjct: 154 TEYINYTKNDVLGKDIYNIIHHGDHNNFMPNILPMS--VAGWSSEPQTQ----------T 201
Query: 223 PNRTFNIRLLIS-------------------------STHLTAGLSRAGGENGQDDSG-- 255
NRTF R L+ S L + + +G E + G
Sbjct: 202 RNRTFECRFLVKPPDDKEETMEEKQQRVSKYETMQICSALLPSNGASSGSERLEPGGGSS 261
Query: 256 ---------DVSSEG---GPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSG 303
DVSSE GPC+MCVARRI +K+ I QFT+KLD G I+ +DT+
Sbjct: 262 AASNVVGGNDVSSEFSDIGPCVMCVARRISFDEKR----IGQFTLKLDTFGKIMAVDTNW 317
Query: 304 VSQTHTQYL 312
+S +++QYL
Sbjct: 318 LSPSYSQYL 326
>gi|443712572|gb|ELU05826.1| hypothetical protein CAPTEDRAFT_92183 [Capitella teleta]
Length = 393
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 132/292 (45%), Positives = 176/292 (60%), Gaps = 48/292 (16%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE 110
N+CLNEKRRREQEN Y+EELAELISA S + + VKPDKCAILQETVNQIR I++ E
Sbjct: 8 NKCLNEKRRREQENIYMEELAELISA-SITDMNNFSNVKPDKCAILQETVNQIRRIQKPE 66
Query: 111 ----TSSDA--VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKS 164
SSDA VQQ +VSSSKP ++ N+V+GPLLLEAL+GFLF+VN G V+F +EN+
Sbjct: 67 DNGGNSSDAAAVQQSQVSSSKPGLLCNDVMGPLLLEALDGFLFMVNSQGSVDFVSENVSQ 126
Query: 165 FIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPN 224
+++YS+ ++L KS+YN+IH GDHA+F N L+ S V W+ TA PN
Sbjct: 127 YLKYSQDDLLSKSIYNIIHVGDHAQFSNSLLMSMGGVMPWS-------------TAGEPN 173
Query: 225 ----RTFNIRLLIS--------------------STHLTAGLSRAGGENGQDDSGDVSSE 260
RTFN R+LI + ++A L + D +G +E
Sbjct: 174 TPKSRTFNCRMLIKPAGEETDEVEVKQTQLSQYENMQISAFLQPVPRDKEADGAG-TDAE 232
Query: 261 GGPCLMCVARRIPPTDKQLSA-PIEQFTMKLDRSGTIIGMDTS--GVSQTHT 309
CL+C+ARRI ++ + IEQFT K D +G I+ DT+ G++ T
Sbjct: 233 NQSCLVCIARRIGFAERTNAMLGIEQFTTKQDLNGKILDCDTNRGGINNVQT 284
>gi|321463226|gb|EFX74243.1| hypothetical protein DAPPUDRAFT_57330 [Daphnia pulex]
Length = 326
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/277 (46%), Positives = 169/277 (61%), Gaps = 36/277 (12%)
Query: 62 QENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----TSSDAVQ 117
QEN YIEELAELIS S A+ ++SL+VKPDKCAILQETVNQIR I++QE +SS +
Sbjct: 1 QENVYIEELAELISV-SIAD-VNSLSVKPDKCAILQETVNQIRKIREQEEDGRSSSSSSS 58
Query: 118 QGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKS 177
+VSSSKP ++ ++LG LLEAL+GFLFVVN +G + +EN+ F+ Y Q+++GKS
Sbjct: 59 SSDVSSSKPALLDTQLLGTFLLEALDGFLFVVNTEGKTEYVSENVAHFLHYQPQDLVGKS 118
Query: 178 VYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLI---- 233
+YN IHHGDHARF + L+P++ AW S+ + R R FN RLLI
Sbjct: 119 IYNFIHHGDHARFSSSLLPTA---IAWPSEMAPASQNR-------LGRCFNCRLLIQPLG 168
Query: 234 --SSTHLTAGLSRAGGENGQDDS------GDVSSEGGPCLMCVARRIPPTDKQLSAPI-- 283
T EN Q + GD ++ CL+CVARRIP T+K S+ I
Sbjct: 169 EQDETMEEKQQRVEHYENMQISAVLQPYPGDPGADPQHCLVCVARRIPSTEKMASSAIVT 228
Query: 284 ------EQFTMKLDRSGTIIGMDTSGVSQTHTQYLNK 314
EQFT KLD SG I+ +D +GVS ++ YL+K
Sbjct: 229 TGGPVVEQFTTKLDSSGKIVAVDVTGVSPPYSSYLSK 265
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 43/54 (79%), Gaps = 5/54 (9%)
Query: 12 QENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
QEN YIEELAELIS S A+ ++SL+VKPDKCAILQETVNQ ++ REQE +
Sbjct: 1 QENVYIEELAELISV-SIAD-VNSLSVKPDKCAILQETVNQI---RKIREQEED 49
>gi|449748365|dbj|BAM83854.1| steroid receptor coactivator [Daphnia pulex]
Length = 1949
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/226 (46%), Positives = 136/226 (60%), Gaps = 54/226 (23%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
+N+CLNEKRRREQEN YIEELAELIS S A+ ++SL+VKPDKCAILQETVNQIR I++Q
Sbjct: 115 INKCLNEKRRREQENVYIEELAELISV-SIAD-VNSLSVKPDKCAILQETVNQIRKIREQ 172
Query: 110 E---------------------------------TSSDA---------VQQGEVSSSKPT 127
E TS A +QQG+VSSSKP
Sbjct: 173 EEDGRSSSSSSSSSSSSSSSSSSGTSSGHNNNNTTSPSADGGVGGGPLLQQGDVSSSKPA 232
Query: 128 VITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDH 187
++ ++LG LLEAL+GFLFVVN +G + +EN+ F+ Y Q+++GKS+YN IHHGDH
Sbjct: 233 LLDTQLLGTFLLEALDGFLFVVNTEGKTEYVSENVAHFLHYQPQDLVGKSIYNFIHHGDH 292
Query: 188 ARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLI 233
ARF + L+P++ AW S+ + R R FN RLLI
Sbjct: 293 ARFSSSLLPTA---IAWPSEMAPASQNR-------LGRCFNCRLLI 328
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 8/59 (13%)
Query: 264 CLMCVARRIPPTDKQLSAPI--------EQFTMKLDRSGTIIGMDTSGVSQTHTQYLNK 314
CL+CVARRIP T+K S+ I EQFT KLD +G I+ +D +GVS ++ Y +K
Sbjct: 413 CLVCVARRIPSTEKMASSAIVTTGGPVVEQFTTKLDSTGKIVAVDVTGVSPPYSSYFSK 471
>gi|60099155|emb|CAH65408.1| hypothetical protein RCJMB04_30a18 [Gallus gallus]
Length = 395
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 158/276 (57%), Gaps = 50/276 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 34 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 91
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVNP+G V F +EN+ ++RY+++
Sbjct: 92 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNPEGNVVFVSENVTQYLRYNQE 151
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNR---TFN 228
E++ S+Y+++H GDH F L+P S VN GG S + TP R TFN
Sbjct: 152 ELMNTSIYSILHVGDHNEFVKILLPKS-LVN------GG------SWSGDTPRRNSHTFN 198
Query: 229 IRLLISSTHLTAGLSRAGGENGQ--------------------DDSGDVSSEGGPCLMCV 268
R+L+ S G +N + +D D+ S CL+CV
Sbjct: 199 CRMLVKPL----ADSEEGHDNQEAHQKYETMQCFAVSQPNSFKEDGEDLQS----CLICV 250
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
ARR P ++ L E FT + D G I +DTS +
Sbjct: 251 ARRAPMKERPLLPSSESFTTRQDLQGKITSLDTSSM 286
>gi|326485710|gb|ADZ76110.1| steroid receptor coactivator 2 [Coturnix japonica]
Length = 1462
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 156/282 (55%), Gaps = 62/282 (21%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 34 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 91
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVNP+G V F +EN+ ++RY+++
Sbjct: 92 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNPEGNVVFVSENVTQYLRYNQE 151
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNR---T 226
E++ S+Y+++H GDH F L+P S VN +W+ D TP R T
Sbjct: 152 ELMNTSIYSILHVGDHNEFVKILLPKSL-VNGGSWSGD--------------TPRRNSHT 196
Query: 227 FNIRLLISSTHLTAGLSRAGGENGQD------------------------DSGDVSSEGG 262
FN R+L+ A E G D D D+ S
Sbjct: 197 FNCRMLVKPL--------ADSEEGHDNQEAHQKYETMQCFAVSQPNSFKEDGEDLQS--- 245
Query: 263 PCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
CL+CVARR P ++ L E FT + D G I +DTS +
Sbjct: 246 -CLICVARRAPMKERPLLPSSESFTTRQDLQGKITSLDTSSM 286
>gi|363730831|ref|XP_001231578.2| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor coactivator 2
isoform 1 [Gallus gallus]
Length = 1463
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 156/282 (55%), Gaps = 62/282 (21%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 34 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 91
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVNP+G V F +EN+ ++RY+++
Sbjct: 92 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNPEGNVVFVSENVTQYLRYNQE 151
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNR---T 226
E++ S+Y+++H GDH F L+P S VN +W+ D TP R T
Sbjct: 152 ELMNTSIYSILHVGDHNEFVKILLPKSL-VNGGSWSGD--------------TPRRNSHT 196
Query: 227 FNIRLLISSTHLTAGLSRAGGENGQD------------------------DSGDVSSEGG 262
FN R+L+ A E G D D D+ S
Sbjct: 197 FNCRMLVKPL--------ADSEEGHDNQEAHQKYETMQCFAVSQPNSFKEDGEDLQS--- 245
Query: 263 PCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
CL+CVARR P ++ L E FT + D G I +DTS +
Sbjct: 246 -CLICVARRAPMKERPLLPSSESFTTRQDLQGKITSLDTSSM 286
>gi|326917738|ref|XP_003205153.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor coactivator 2-like
[Meleagris gallopavo]
Length = 1462
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 156/282 (55%), Gaps = 62/282 (21%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 34 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 91
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVNP+G V F +EN+ ++RY+++
Sbjct: 92 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNPEGNVVFVSENVTQYLRYNQE 151
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNR---T 226
E++ S+Y+++H GDH F L+P S VN +W+ D TP R T
Sbjct: 152 ELMNTSIYSILHVGDHNEFVKILLPKSL-VNGGSWSGD--------------TPRRNSHT 196
Query: 227 FNIRLLISSTHLTAGLSRAGGENGQD------------------------DSGDVSSEGG 262
FN R+L+ A E G D D D+ S
Sbjct: 197 FNCRMLVKPL--------ADSEEGHDNQEAHQKYETMQCFAVSQPNSFKEDGEDLQS--- 245
Query: 263 PCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
CL+CVARR P ++ L E FT + D G I +DTS +
Sbjct: 246 -CLICVARRAPMKERPLLPSSESFTTRQDLQGKITSLDTSSM 286
>gi|224046357|ref|XP_002199126.1| PREDICTED: nuclear receptor coactivator 2 [Taeniopygia guttata]
Length = 1463
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 155/280 (55%), Gaps = 62/280 (22%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 34 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 91
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVNP+G V F +EN+ ++RY+++
Sbjct: 92 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNPEGNVVFVSENVTQYLRYNQE 151
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNR---T 226
E++ S+Y+++H GDH F L+P S VN +W+ D TP R T
Sbjct: 152 ELMNTSIYSILHVGDHNEFVKILLPKSL-VNGGSWSGD--------------TPRRNSHT 196
Query: 227 FNIRLLISSTHLTAGLSRAGGENGQD------------------------DSGDVSSEGG 262
FN R+L+ A E G D D D+ S
Sbjct: 197 FNCRMLVKPL--------ADSEEGHDNQEAHQKYETMQCFAVSQPNSFKEDGEDLQS--- 245
Query: 263 PCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
CL+CVARR P ++ L E FT + D G I +DTS
Sbjct: 246 -CLICVARRAPMKERPLLPSSESFTTRQDLQGKITSLDTS 284
>gi|190337440|gb|AAI63724.1| Nuclear receptor coactivator 2 [Danio rerio]
Length = 1505
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 159/275 (57%), Gaps = 53/275 (19%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR RE EN YIEELAELI A+F + + + VKPDKCAIL+ETV QIR IK+QE ++
Sbjct: 36 EKRNREHENKYIEELAELI-FANFND-IDNFNVKPDKCAILKETVKQIRQIKEQEKAAAA 93
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G + F +EN+ ++RY+++
Sbjct: 94 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNMEGNIVFVSENVTQYLRYNQE 153
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNR---T 226
E++ SVY+++H GDHA F L+P SH VN W+S++ P R T
Sbjct: 154 ELMNTSVYSILHVGDHAEFIKNLLPKSH-VNGVPWSSEN--------------PRRNSHT 198
Query: 227 FNIRLLISSTHLTAGLSRAGGENGQD----------------DSGDVSSEG---GPCLMC 267
FN R+L+ + H A E QD + + EG CL+C
Sbjct: 199 FNCRMLV-NPHSEA-------EETQDHEAQQKYETMQCFAVSEPKSIKEEGEDFQSCLIC 250
Query: 268 VARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
VARR+P ++ + E FT + D G I +DTS
Sbjct: 251 VARRVPMKERPMLPTQESFTTRQDLQGKITSLDTS 285
>gi|260827635|ref|XP_002608770.1| hypothetical protein BRAFLDRAFT_212110 [Branchiostoma floridae]
gi|229294122|gb|EEN64780.1| hypothetical protein BRAFLDRAFT_212110 [Branchiostoma floridae]
Length = 343
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 161/279 (57%), Gaps = 40/279 (14%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
+++C+ EK+RREQE YIEELAELIS S E++ + +K DKCAILQE V QI+ ++ Q
Sbjct: 1 MSKCVQEKKRREQEKMYIEELAELIS--SNMENL--MTIKADKCAILQEAVKQIKALRHQ 56
Query: 110 ----ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSF 165
+ +AVQQ +VSSS +++ + VLG LLLEAL GFLFVVN G + F + N++++
Sbjct: 57 GRTESAAREAVQQSDVSSSGQSLLPSNVLGNLLLEALNGFLFVVNSQGKLEFISNNVQNY 116
Query: 166 IRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVN-AWTSDSGGQAGKRPSLTASTPN 224
+ Y+ E++G SVYN+IH GDH +F NCL+P S W D+ G+
Sbjct: 117 LSYTHDELMGSSVYNIIHVGDHTQFVNCLLPMSLGNGVGWAPDAAGKKC----------- 165
Query: 225 RTFNIRLLIS-----------------STHLTAGLSRAGGENGQDDSGDVSSEGGPCLMC 267
R+F R+++ T + + G+ + G+ E CL+C
Sbjct: 166 RSFQCRMMVKLEAEEDMEKHRTQTPQYKTMQCSAVYHPHPTKGKTEDGNDVPEA--CLVC 223
Query: 268 VARRIP-PTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVS 305
+A ++ TD + P+EQF+ + D +G I+ +DTSG+S
Sbjct: 224 IASKVAEATDVETVMPLEQFSTRQDINGKILAVDTSGLS 262
>gi|18859481|ref|NP_571852.1| nuclear receptor coactivator 2 [Danio rerio]
gi|82112094|sp|Q98TW1.1|NCOA2_DANRE RecName: Full=Nuclear receptor coactivator 2; Short=NCoA-2;
Short=NCoA2; AltName: Full=Glucocorticoid
receptor-interacting protein 1; AltName: Full=Steroid
receptor coactivator 2; AltName: Full=Transcriptional
intermediary factor 2
gi|13022010|gb|AAK11608.1|AF323989_1 transcriptional intermediary factor 2 [Danio rerio]
gi|37785625|gb|AAP69780.1| nuclear receptor coactivator [Danio rerio]
Length = 1505
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 159/275 (57%), Gaps = 53/275 (19%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR RE E+ YIEELAELI A+F + + + VKPDKCAIL+ETV QIR IK+QE ++
Sbjct: 36 EKRNREHESKYIEELAELI-FANFND-IDNFNVKPDKCAILKETVKQIRQIKEQEKAAAA 93
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G + F +EN+ ++RY+++
Sbjct: 94 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNMEGNIVFVSENVTQYLRYNQE 153
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNR---T 226
E++ SVY+++H GDHA F L+P SH VN W+S++ P R T
Sbjct: 154 ELMNTSVYSILHVGDHAEFIKNLLPKSH-VNGVPWSSEN--------------PRRNSHT 198
Query: 227 FNIRLLISSTHLTAGLSRAGGENGQD----------------DSGDVSSEG---GPCLMC 267
FN R+L+ + H A E QD + + EG CL+C
Sbjct: 199 FNCRMLV-NPHSEA-------EETQDHEAQQKYETMQCFAVSEPKSIKEEGEDFQSCLIC 250
Query: 268 VARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
VARR+P ++ + E FT + D G I +DTS
Sbjct: 251 VARRVPMKERPMLPTQESFTTRQDLQGKITSLDTS 285
>gi|238637243|ref|NP_001154867.1| uncharacterized protein LOC100301960 [Xenopus laevis]
gi|213626305|gb|AAI70558.1| Unknown (protein for MGC:197285) [Xenopus laevis]
Length = 1432
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 152/274 (55%), Gaps = 54/274 (19%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + +L KPDKCAIL+ETV QIR IK+ E ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNLNFKPDKCAILKETVKQIRQIKEHEKTAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNREGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNR---TFN 228
E++ SVYN++H GDH+ F L+P SL P R TFN
Sbjct: 153 ELMNTSVYNILHVGDHSEFIKNLLPK-------------------SLVNGGPRRNSHTFN 193
Query: 229 IRLLISS----------TH--------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVAR 270
R+L+ +H ++ E G+D CL+CVAR
Sbjct: 194 CRMLVKPMIECEEEGQESHQKYETMQCFAVSQPKSIKEEGEDFQS--------CLICVAR 245
Query: 271 RIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
R+P ++ + P E FT + D G I +DT+ +
Sbjct: 246 RVPMKERPVPPPSESFTTRQDLQGKITSLDTTNM 279
>gi|432912031|ref|XP_004078833.1| PREDICTED: nuclear receptor coactivator 2-like [Oryzias latipes]
Length = 1494
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/274 (41%), Positives = 151/274 (55%), Gaps = 49/274 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKR REQEN YIEELAELI A + L KPDKCAIL+ETV QIR IK+QE +S A
Sbjct: 36 EKRNREQENKYIEELAELIFAN--INDIDDLNFKPDKCAILKETVKQIRQIKEQEKTSVA 93
Query: 116 ----VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
VQ+ +VSSS VI + LGP++LEAL+GF FVVN +G + F +EN+ ++RY +
Sbjct: 94 DAEEVQKADVSSSGHGVIDKDALGPMMLEALDGFFFVVNMEGNIVFVSENVSQYLRYQQD 153
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ SVY+++H GDHA F L+P S VN +SDS + + TFN R+
Sbjct: 154 ELMNTSVYSVLHVGDHAEFIKNLLPKS-LVNHRSSDSSHRN-----------SHTFNCRM 201
Query: 232 LISSTHLTAGLSRAGGE-----NGQD---------------DSGDVSSEG---GPCLMCV 268
L+ RA GE + QD + + EG CL+CV
Sbjct: 202 LVK--------PRADGEACAGADQQDAAQQKYETMQCFAVSEPKSIKEEGEDFQSCLICV 253
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARR P ++ P E FT + D G I +DTS
Sbjct: 254 ARRAPVKERPAVPPYESFTTRQDLQGKITSLDTS 287
>gi|62201602|gb|AAH92442.1| NCOA2 protein [Homo sapiens]
Length = 370
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 151/264 (57%), Gaps = 29/264 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQD----------DSGDVSSEG---GPCLMCVARRIPPTDKQ 278
L+ + E Q + EG CL+CVARR+P ++
Sbjct: 203 LVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERP 262
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTS 302
+ E FT + D G I +DTS
Sbjct: 263 VLPSSESFTTRQDLQGKITSLDTS 286
>gi|351705556|gb|EHB08475.1| Nuclear receptor coactivator 2, partial [Heterocephalus glaber]
Length = 1461
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 157/273 (57%), Gaps = 47/273 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ KSVY+++H GDH F L+P S VN +W+ G+A +R S TFN
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKSI-VNGGSWS----GEAPRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVA 269
R+L+ + E G D+ + EG CL+CVA
Sbjct: 201 RMLVKPLPESE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVA 253
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
RR+P ++ + E FT + D G I +DTS
Sbjct: 254 RRVPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|148230519|ref|NP_001081139.1| nuclear receptor coactivator 2 [Xenopus laevis]
gi|13124365|sp|Q9W705.1|NCOA2_XENLA RecName: Full=Nuclear receptor coactivator 2; Short=NCoA-2;
AltName: Full=Transcriptional intermediary factor 2;
Short=xTIF2
gi|5123921|emb|CAB45389.1| TIF2 protein [Xenopus laevis]
Length = 1516
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 150/269 (55%), Gaps = 41/269 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + +L KPDKCAIL+ETV QIR IK+ E ++
Sbjct: 32 EKRNREQENKYIEELAELI-FANFND-IDNLNFKPDKCAILKETVKQIRQIKEHEKTAAA 89
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 90 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNREGNVVFVSENVTQYLRYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNR---TFN 228
E++ SVY+++H GDH+ F L+P SL P R TFN
Sbjct: 150 ELMNTSVYSILHVGDHSEFIKNLLPK-------------------SLVNGVPRRNSHTFN 190
Query: 229 IRLLISSTHLTAGLSRAGGENGQ----------DDSGDVSSEG---GPCLMCVARRIPPT 275
R+L+ G E Q + EG CL+CVARR+P
Sbjct: 191 CRMLVKPMMECEEERHDGQETHQKYESMQCFAVSQPKSIKEEGEDFQSCLICVARRVPVK 250
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ + P E FT + D G I +DT+ +
Sbjct: 251 ERPVPPPSESFTTRQDFQGKITSLDTTSM 279
>gi|149721334|ref|XP_001493287.1| PREDICTED: nuclear receptor coactivator 2 [Equus caballus]
Length = 1464
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 154/273 (56%), Gaps = 43/273 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G AG+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHNEFVKNLLPKS------IVNGGSWAGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYEAMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+P ++ + E FT + D G I +DTS +
Sbjct: 256 VPMKERPVLTSSESFTTRQDLQGKITSLDTSSM 288
>gi|26352490|dbj|BAC39875.1| unnamed protein product [Mus musculus]
Length = 873
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/264 (41%), Positives = 152/264 (57%), Gaps = 29/264 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P ++ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNG-----GSWSGEPPRRSS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ----------DDSGDVSSEG---GPCLMCVARRIPPTDKQ 278
L+ + E Q + EG CL+CVARR+P ++
Sbjct: 203 LVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERP 262
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTS 302
E FT + D G I +DTS
Sbjct: 263 TLPSSESFTTRQDLQGKITSLDTS 286
>gi|213982939|ref|NP_001135631.1| nuclear receptor coactivator 2 [Xenopus (Silurana) tropicalis]
gi|218527809|sp|B5DE09.1|NCOA2_XENTR RecName: Full=Nuclear receptor coactivator 2; Short=NCoA-2;
AltName: Full=Transcriptional intermediary factor 2
gi|197246315|gb|AAI68483.1| Unknown (protein for MGC:172822) [Xenopus (Silurana) tropicalis]
Length = 1440
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 150/269 (55%), Gaps = 41/269 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + +L KPDKCAIL+ETV QIR IK+ E ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNLNFKPDKCAILKETVKQIRQIKEHEKTAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNREGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNR---TFN 228
E++ SVY+++H GDH+ F L+P S+ P R TFN
Sbjct: 153 ELMNTSVYSILHVGDHSEFIKNLLPK-------------------SIVNGGPRRNSHTFN 193
Query: 229 IRLLISSTHLTAGLSRAGGENGQ----------DDSGDVSSEG---GPCLMCVARRIPPT 275
R+L+ G E Q + EG CL+CVARR+P
Sbjct: 194 CRMLVKPMMECEEEGHDGQETHQKYETMQCFAVSQPKSIKEEGEDFQSCLICVARRVPMK 253
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ + P E FT + D G I +DT+ +
Sbjct: 254 ERPVPPPSESFTTRQDLQGKITSLDTTNM 282
>gi|348588454|ref|XP_003479981.1| PREDICTED: nuclear receptor coactivator 2-like [Cavia porcellus]
Length = 1525
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPESE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|395732073|ref|XP_003780548.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor coactivator 1,
partial [Pongo abelii]
Length = 1287
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 158/269 (58%), Gaps = 40/269 (14%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W +A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQ----EATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------QDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI ++ G+ Q+D D S CL+C+ARR+ P
Sbjct: 198 RMLIHPPDEPGTENQEAGQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRL-PR 252
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ +E F K D +G II +DTS +
Sbjct: 253 PPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|417406510|gb|JAA49912.1| Putative aryl-hydrocarbon receptor nuclear translocator [Desmodus
rotundus]
Length = 1463
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAPQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|164523396|gb|ABY60788.1| transcriptional intermediary factor-2 isoform 2 [Sus scrofa]
Length = 1394
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P ++ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRSS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDPE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|118026944|ref|NP_001071163.1| nuclear receptor coactivator 2 isoform b [Mus musculus]
Length = 1393
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 154/268 (57%), Gaps = 37/268 (13%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P ++ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNG-----GSWSGEPPRRSS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ-----------------DDSGDVSSEGGPCLMCVARRIPP 274
L+ + E Q ++ D+ S CL+CVARR+P
Sbjct: 203 LVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQS----CLICVARRVPM 258
Query: 275 TDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ E FT + D G I +DTS
Sbjct: 259 KERPTLPSSESFTTRQDLQGKITSLDTS 286
>gi|301766264|ref|XP_002918551.1| PREDICTED: nuclear receptor coactivator 2-like [Ailuropoda
melanoleuca]
Length = 1464
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NVDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPESE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|281351672|gb|EFB27256.1| hypothetical protein PANDA_007023 [Ailuropoda melanoleuca]
Length = 1461
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NVDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPESE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|31418367|gb|AAH53387.1| Ncoa2 protein [Mus musculus]
Length = 1393
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 154/268 (57%), Gaps = 37/268 (13%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P ++ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNG-----GSWSGEPPRRSS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ-----------------DDSGDVSSEGGPCLMCVARRIPP 274
L+ + E Q ++ D+ S CL+CVARR+P
Sbjct: 203 LVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQS----CLICVARRVPM 258
Query: 275 TDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ E FT + D G I +DTS
Sbjct: 259 KERPTLPSSESFTTRQDLQGKITSLDTS 286
>gi|395511027|ref|XP_003759764.1| PREDICTED: nuclear receptor coactivator 2 [Sarcophilus harrisii]
Length = 1514
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 156/266 (58%), Gaps = 33/266 (12%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NVDEVQKSDVSSTGQSVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W+++ A +R S TFN
Sbjct: 153 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGGPWSNE----APRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQ----------DDSGDVSSEG---GPCLMCVARRIPPTD 276
R+L+ + S E Q + EG CL+CVARR+P +
Sbjct: 201 RMLVKPLTDSEEESHDSQEAHQKYETMQCFAVSQPKSIKEEGEDLHSCLICVARRVPMKE 260
Query: 277 KQLSAPIEQFTMKLDRSGTIIGMDTS 302
+ + E FT + D G I +DTS
Sbjct: 261 RPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|151175624|dbj|BAF69036.1| glucocorticoid receptor interacting protein 1 [Mus musculus]
Length = 1393
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 154/268 (57%), Gaps = 37/268 (13%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELA+LI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELADLI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P T+ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNG-----GSWSGEPPRRTS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ-----------------DDSGDVSSEGGPCLMCVARRIPP 274
L+ + E Q ++ D+ S CL+CVARR+P
Sbjct: 203 LVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQS----CLICVARRVPM 258
Query: 275 TDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ E FT + D G I +DTS
Sbjct: 259 KERPTLPSSESFTTRQDLQGKITSLDTS 286
>gi|403304120|ref|XP_003942659.1| PREDICTED: nuclear receptor coactivator 2 [Saimiri boliviensis
boliviensis]
Length = 1464
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|334325491|ref|XP_001378653.2| PREDICTED: nuclear receptor coactivator 2 [Monodelphis domestica]
Length = 1480
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 156/266 (58%), Gaps = 33/266 (12%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NVDEVQKSDVSSTGQSVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W+++ A +R S TFN
Sbjct: 153 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGGPWSNE----APRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQ----------DDSGDVSSEG---GPCLMCVARRIPPTD 276
R+L+ + S E Q + EG CL+CVARR+P +
Sbjct: 201 RMLVKPLTDSEEESHDSQEAHQKYETMQCFAVSQPKSIKEEGEDLHSCLICVARRVPMKE 260
Query: 277 KQLSAPIEQFTMKLDRSGTIIGMDTS 302
+ + E FT + D G I +DTS
Sbjct: 261 RPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|296226664|ref|XP_002759043.1| PREDICTED: nuclear receptor coactivator 2 [Callithrix jacchus]
Length = 1464
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|297683062|ref|XP_002819216.1| PREDICTED: nuclear receptor coactivator 2 isoform 2 [Pongo abelii]
Length = 1464
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|68534998|ref|NP_001020399.1| nuclear receptor coactivator 1 [Sus scrofa]
gi|75075065|sp|Q4PJW2.1|NCOA1_PIG RecName: Full=Nuclear receptor coactivator 1; Short=NCoA-1;
AltName: Full=Steroid receptor coactivator 1;
Short=SRC-1
gi|67866953|gb|AAY82453.1| nuclear receptor coactivator-1 [Sus scrofa]
Length = 1440
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 156/275 (56%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+P + +E F K D +G II +DTS +
Sbjct: 248 RRLPRPPAIMG--VESFMTKQDTTGKIISIDTSSL 280
>gi|73999477|ref|XP_544118.2| PREDICTED: nuclear receptor coactivator 2 [Canis lupus familiaris]
Length = 1465
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 152/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY ++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYGILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|359072439|ref|XP_002692770.2| PREDICTED: nuclear receptor coactivator 2 [Bos taurus]
Length = 1492
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 155/273 (56%), Gaps = 47/273 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ KSVY+++H GDH F L+P S VN AW+ G+ +R S TFN
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKSI-VNGGAWS----GEPPRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVA 269
R+L+ + E G D+ + EG CL+CVA
Sbjct: 201 RMLVKPLPESE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVA 253
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
RR+P ++ E FT + D G I +DTS
Sbjct: 254 RRVPMKERPALPSSESFTTRQDLQGKITSLDTS 286
>gi|164523390|gb|ABY60785.1| steroid receptor coactivator 1 isoform 1 [Sus scrofa]
Length = 1441
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 156/275 (56%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+P + +E F K D +G II +DTS +
Sbjct: 248 RRLPRPPAIMG--VESFMTKQDTTGKIISIDTSSL 280
>gi|109086650|ref|XP_001082161.1| PREDICTED: nuclear receptor coactivator 2 isoform 1 [Macaca
mulatta]
gi|297299561|ref|XP_002805423.1| PREDICTED: nuclear receptor coactivator 2 isoform 2 [Macaca
mulatta]
Length = 1464
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|13929174|ref|NP_114010.1| nuclear receptor coactivator 2 [Rattus norvegicus]
gi|13124334|sp|Q9WUI9.1|NCOA2_RAT RecName: Full=Nuclear receptor coactivator 2; Short=NCoA-2;
AltName: Full=Transcriptional intermediary factor 2
gi|4581053|gb|AAD24587.1|AF136943_1 transcriptional intermediary factor 2 [Rattus norvegicus]
Length = 1465
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 155/273 (56%), Gaps = 47/273 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ KSVY+++H GDH F L+P S VN +WT G+ +R S TFN
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNGGSWT----GEPPRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVA 269
R+L+ + E G D+ + EG CL+CVA
Sbjct: 201 RMLVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDKQSCLICVA 253
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
RR+P ++ E FT + D G I +DTS
Sbjct: 254 RRVPMKERPALPSSESFTTRQDLQGKITFLDTS 286
>gi|426359874|ref|XP_004047182.1| PREDICTED: nuclear receptor coactivator 2 [Gorilla gorilla gorilla]
Length = 1464
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|402878452|ref|XP_003902897.1| PREDICTED: nuclear receptor coactivator 2 [Papio anubis]
Length = 1464
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|350596253|ref|XP_003360964.2| PREDICTED: nuclear receptor coactivator 2-like [Sus scrofa]
Length = 1463
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P ++ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRSS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDPE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|344272898|ref|XP_003408265.1| PREDICTED: nuclear receptor coactivator 2 [Loxodonta africana]
Length = 1500
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 156/273 (57%), Gaps = 47/273 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQSVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ KSVY+++H GDH F L+P VN +WT G+ +R S TFN
Sbjct: 153 ELMNKSVYSILHVGDHNEFVKNLLPKPI-VNGGSWT----GEPPRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVA 269
R+L+ + E G D+ + EG CL+CVA
Sbjct: 201 RMLVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVA 253
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
RR+P ++ + E FT + D G I +DTS
Sbjct: 254 RRVPMKERPILPSSESFTTRQDLQGKITSLDTS 286
>gi|358415392|ref|XP_584905.6| PREDICTED: nuclear receptor coactivator 2 [Bos taurus]
Length = 1465
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 155/273 (56%), Gaps = 47/273 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ KSVY+++H GDH F L+P S VN AW+ G+ +R S TFN
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKSI-VNGGAWS----GEPPRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVA 269
R+L+ + E G D+ + EG CL+CVA
Sbjct: 201 RMLVKPLPESE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVA 253
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
RR+P ++ E FT + D G I +DTS
Sbjct: 254 RRVPMKERPALPSSESFTTRQDLQGKITSLDTS 286
>gi|5729858|ref|NP_006531.1| nuclear receptor coactivator 2 [Homo sapiens]
gi|114620441|ref|XP_001163706.1| PREDICTED: nuclear receptor coactivator 2 [Pan troglodytes]
gi|13626594|sp|Q15596.2|NCOA2_HUMAN RecName: Full=Nuclear receptor coactivator 2; Short=NCoA-2;
AltName: Full=Class E basic helix-loop-helix protein 75;
Short=bHLHe75; AltName: Full=Transcriptional
intermediary factor 2; Short=hTIF2
gi|1877215|emb|CAA66263.1| transcriptional intermediary factor 2 [Homo sapiens]
gi|119607369|gb|EAW86963.1| nuclear receptor coactivator 2 [Homo sapiens]
gi|410208914|gb|JAA01676.1| nuclear receptor coactivator 2 [Pan troglodytes]
gi|410251788|gb|JAA13861.1| nuclear receptor coactivator 2 [Pan troglodytes]
gi|410299000|gb|JAA28100.1| nuclear receptor coactivator 2 [Pan troglodytes]
gi|410331573|gb|JAA34733.1| nuclear receptor coactivator 2 [Pan troglodytes]
Length = 1464
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|380787407|gb|AFE65579.1| nuclear receptor coactivator 2 [Macaca mulatta]
gi|383415177|gb|AFH30802.1| nuclear receptor coactivator 2 [Macaca mulatta]
gi|384944786|gb|AFI35998.1| nuclear receptor coactivator 2 [Macaca mulatta]
Length = 1464
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|344258532|gb|EGW14636.1| Nuclear receptor coactivator 2 [Cricetulus griseus]
Length = 1413
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 154/274 (56%), Gaps = 49/274 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 34 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 91
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 92 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 151
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNR---TFN 228
E++ KSVY+++H GDH F L+P S VN GG S + TP R TFN
Sbjct: 152 ELMNKSVYSILHVGDHTEFVKNLLPKSI-VN------GG------SWSGETPRRNSHTFN 198
Query: 229 IRLLISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCV 268
R+L+ + E G D+ + EG CL+CV
Sbjct: 199 CRMLVKPLPDSE-------EEGHDNQEAHQKYEAMQCFAVSQPKSIKEEGEDLQSCLICV 251
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARR+P ++ E FT + D G I +DTS
Sbjct: 252 ARRVPMKERPALPSSESFTTRQDLQGKITSLDTS 285
>gi|291388105|ref|XP_002710565.1| PREDICTED: nuclear receptor coactivator 2 [Oryctolagus cuniculus]
Length = 1637
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVRNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPILPSSESFTTRQDLQGKITSLDTS 286
>gi|291387176|ref|XP_002710112.1| PREDICTED: nuclear receptor coactivator 1 isoform 2 [Oryctolagus
cuniculus]
Length = 1398
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 157/277 (56%), Gaps = 56/277 (20%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----AARRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRI--PPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ PPT +E F K D +G II +DTS +
Sbjct: 248 RRLPRPPTITG----VESFMTKQDTTGKIISIDTSSL 280
>gi|166796043|ref|NP_001107747.1| nuclear receptor coactivator 2 [Sus scrofa]
gi|164523394|gb|ABY60787.1| transcriptional intermediary factor-2 isoform 1 [Sus scrofa]
Length = 1463
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P ++ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRSS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDPE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|355779749|gb|EHH64225.1| hypothetical protein EGM_17394, partial [Macaca fascicularis]
Length = 1462
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|291387174|ref|XP_002710111.1| PREDICTED: nuclear receptor coactivator 1 isoform 1 [Oryctolagus
cuniculus]
Length = 1440
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/277 (41%), Positives = 157/277 (56%), Gaps = 56/277 (20%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----AARRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRI--PPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ PPT +E F K D +G II +DTS +
Sbjct: 248 RRLPRPPTITG----VESFMTKQDTTGKIISIDTSSL 280
>gi|1853980|gb|AAC53151.1| glucocorticoid receptor interacting protein 1 [Mus musculus]
Length = 1462
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 154/268 (57%), Gaps = 37/268 (13%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELA+LI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELADLI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P T+ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNG-----GSWSGEPPRRTS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ-----------------DDSGDVSSEGGPCLMCVARRIPP 274
L+ + E Q ++ D+ S CL+CVARR+P
Sbjct: 203 LVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQS----CLICVARRVPM 258
Query: 275 TDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ E FT + D G I +DTS
Sbjct: 259 KERPTLPSSESFTTRQDLQGKITSLDTS 286
>gi|355698012|gb|EHH28560.1| hypothetical protein EGK_19025, partial [Macaca mulatta]
Length = 1462
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|296480584|tpg|DAA22699.1| TPA: nuclear receptor coactivator 2 [Bos taurus]
Length = 1559
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 155/273 (56%), Gaps = 47/273 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ KSVY+++H GDH F L+P S VN AW+ G+ +R S TFN
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKSI-VNGGAWS----GEPPRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVA 269
R+L+ + E G D+ + EG CL+CVA
Sbjct: 201 RMLVKPLPESE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVA 253
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
RR+P ++ E FT + D G I +DTS
Sbjct: 254 RRVPMKERPALPSSESFTTRQDLQGKITSLDTS 286
>gi|168275642|dbj|BAG10541.1| nuclear receptor coactivator 2 [synthetic construct]
Length = 1464
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|164523392|gb|ABY60786.1| steroid receptor coactivator 1 isoform 2 [Sus scrofa]
Length = 1399
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 156/275 (56%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+P + +E F K D +G II +DTS +
Sbjct: 248 RRLPRPPAIMG--VESFMTKQDTTGKIISIDTSSL 280
>gi|109730401|gb|AAI14384.1| Nuclear receptor coactivator 2 [Homo sapiens]
Length = 1464
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|332251453|ref|XP_003274860.1| PREDICTED: nuclear receptor coactivator 2 [Nomascus leucogenys]
Length = 1464
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|426235618|ref|XP_004011777.1| PREDICTED: nuclear receptor coactivator 2 [Ovis aries]
Length = 1465
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/273 (41%), Positives = 155/273 (56%), Gaps = 47/273 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ KSVY+++H GDH F L+P S VN AW+ G+ +R S TFN
Sbjct: 153 ELMNKSVYSVLHVGDHTEFVKNLLPKSI-VNGGAWS----GEPPRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVA 269
R+L+ + E G D+ + EG CL+CVA
Sbjct: 201 RMLVKPLPESE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVA 253
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
RR+P ++ E FT + D G I +DTS
Sbjct: 254 RRVPMKERPALPSSESFTTRQDLQGKITSLDTS 286
>gi|397522680|ref|XP_003831386.1| PREDICTED: nuclear receptor coactivator 2 [Pan paniscus]
Length = 1464
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 153/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ + E FT + D G I +DTS
Sbjct: 256 VPMKERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|426223214|ref|XP_004005772.1| PREDICTED: nuclear receptor coactivator 1 isoform 1 [Ovis aries]
Length = 1399
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----AARRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHRP------DEPGPENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|118026940|ref|NP_032704.2| nuclear receptor coactivator 2 isoform a [Mus musculus]
gi|341942241|sp|Q61026.3|NCOA2_MOUSE RecName: Full=Nuclear receptor coactivator 2; Short=NCoA-2;
AltName: Full=Glucocorticoid receptor-interacting
protein 1; Short=GRIP-1; AltName: Full=Transcriptional
intermediary factor 2
Length = 1462
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 154/268 (57%), Gaps = 37/268 (13%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P ++ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNG-----GSWSGEPPRRSS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ-----------------DDSGDVSSEGGPCLMCVARRIPP 274
L+ + E Q ++ D+ S CL+CVARR+P
Sbjct: 203 LVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQS----CLICVARRVPM 258
Query: 275 TDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ E FT + D G I +DTS
Sbjct: 259 KERPTLPSSESFTTRQDLQGKITSLDTS 286
>gi|426223216|ref|XP_004005773.1| PREDICTED: nuclear receptor coactivator 1 isoform 2 [Ovis aries]
Length = 1440
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----AARRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHRP------DEPGPENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|431891832|gb|ELK02366.1| Nuclear receptor coactivator 2 [Pteropus alecto]
Length = 1546
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 157/268 (58%), Gaps = 37/268 (13%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISS---------THLTAG--------LSRAGGENGQDDSGDVSSEGGPCLMCVARRIPP 274
L+ H A + + ++ +++ D+ S CL+CVARR+P
Sbjct: 203 LVKPFPDSEEEGHDHQEAHQKYETMQCFAVSQPKSIKEEGEDLQS----CLICVARRVPM 258
Query: 275 TDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ + E FT + D G I +DTS
Sbjct: 259 KERPVLPSSESFTTRQDLQGKITSLDTS 286
>gi|354498570|ref|XP_003511388.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor coactivator 2-like
[Cricetulus griseus]
Length = 1608
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 154/274 (56%), Gaps = 49/274 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNR---TFN 228
E++ KSVY+++H GDH F L+P S VN GG S + TP R TFN
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKSI-VN------GG------SWSGETPRRNSHTFN 199
Query: 229 IRLLISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCV 268
R+L+ + E G D+ + EG CL+CV
Sbjct: 200 CRMLVKPLPDSE-------EEGHDNQEAHQKYEAMQCFAVSQPKSIKEEGEDLQSCLICV 252
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARR+P ++ E FT + D G I +DTS
Sbjct: 253 ARRVPMKERPALPSSESFTTRQDLQGKITSLDTS 286
>gi|338713802|ref|XP_003362956.1| PREDICTED: nuclear receptor coactivator 1 isoform 2 [Equus
caballus]
Length = 1400
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 155/275 (56%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+P +E F K D +G II +DTS +
Sbjct: 248 RRLP--RPPAVTGVESFMTKQDTTGKIISIDTSSL 280
>gi|417406410|gb|JAA49865.1| Putative aryl-hydrocarbon receptor nuclear translocator [Desmodus
rotundus]
Length = 1398
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|329664314|ref|NP_001193144.1| nuclear receptor coactivator 1 [Bos taurus]
gi|296482347|tpg|DAA24462.1| TPA: nuclear receptor coactivator 1-like [Bos taurus]
Length = 1441
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 156/275 (56%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W ++ Q + TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQEATRQN-----------SHTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHRP------DEPGPENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|344280385|ref|XP_003411964.1| PREDICTED: nuclear receptor coactivator 1 isoform 2 [Loxodonta
africana]
Length = 1399
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 155/275 (56%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+P +E F K D +G II +DTS +
Sbjct: 248 RRLP--RPPAVTGVESFMTKQDTTGKIISIDTSSL 280
>gi|345781963|ref|XP_532891.3| PREDICTED: nuclear receptor coactivator 1 isoform 2 [Canis lupus
familiaris]
Length = 1440
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|440906090|gb|ELR56395.1| Nuclear receptor coactivator 1 [Bos grunniens mutus]
Length = 1441
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHRP------DEPGPENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|344280383|ref|XP_003411963.1| PREDICTED: nuclear receptor coactivator 1 isoform 1 [Loxodonta
africana]
Length = 1441
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 155/275 (56%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+P +E F K D +G II +DTS +
Sbjct: 248 RRLP--RPPAVTGVESFMTKQDTTGKIISIDTSSL 280
>gi|149727728|ref|XP_001503156.1| PREDICTED: nuclear receptor coactivator 1 isoform 1 [Equus
caballus]
Length = 1442
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 155/275 (56%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+P +E F K D +G II +DTS +
Sbjct: 248 RRLP--RPPAVTGVESFMTKQDTTGKIISIDTSSL 280
>gi|410987265|ref|XP_003999925.1| PREDICTED: nuclear receptor coactivator 2 [Felis catus]
Length = 1464
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 152/271 (56%), Gaps = 43/271 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQDD-----------------SGDVSSEG---GPCLMCVARR 271
L+ + E G D+ + EG CL+CVARR
Sbjct: 203 LVKPLPDSE-------EEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARR 255
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+P ++ E FT + D G I +DTS
Sbjct: 256 VPMKERPGLPSSESFTTRQDLQGKITSLDTS 286
>gi|410955730|ref|XP_003984504.1| PREDICTED: nuclear receptor coactivator 1 [Felis catus]
Length = 1382
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|296224369|ref|XP_002758036.1| PREDICTED: nuclear receptor coactivator 1 isoform 1 [Callithrix
jacchus]
Length = 1441
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|1906028|gb|AAB50242.1| steroid receptor coactivator-1 [Homo sapiens]
Length = 1441
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|441660082|ref|XP_004091402.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor coactivator 1
[Nomascus leucogenys]
Length = 1441
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|383422425|gb|AFH34426.1| nuclear receptor coactivator 1 isoform 3 [Macaca mulatta]
Length = 1440
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|301756044|ref|XP_002913840.1| PREDICTED: nuclear receptor coactivator 1-like [Ailuropoda
melanoleuca]
gi|281344987|gb|EFB20571.1| hypothetical protein PANDA_001701 [Ailuropoda melanoleuca]
Length = 1441
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|114576432|ref|XP_001145713.1| PREDICTED: nuclear receptor coactivator 1 isoform 1 [Pan
troglodytes]
gi|397513551|ref|XP_003827075.1| PREDICTED: nuclear receptor coactivator 1 [Pan paniscus]
gi|410221242|gb|JAA07840.1| nuclear receptor coactivator 1 [Pan troglodytes]
gi|410300906|gb|JAA29053.1| nuclear receptor coactivator 1 [Pan troglodytes]
gi|410331487|gb|JAA34690.1| nuclear receptor coactivator 1 [Pan troglodytes]
Length = 1441
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|426334900|ref|XP_004028974.1| PREDICTED: nuclear receptor coactivator 1 isoform 1 [Gorilla
gorilla gorilla]
Length = 1399
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|380817518|gb|AFE80633.1| nuclear receptor coactivator 1 isoform 1 [Macaca mulatta]
gi|383422423|gb|AFH34425.1| nuclear receptor coactivator 1 isoform 1 [Macaca mulatta]
gi|384950034|gb|AFI38622.1| nuclear receptor coactivator 1 isoform 1 [Macaca mulatta]
Length = 1441
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|380817520|gb|AFE80634.1| nuclear receptor coactivator 1 isoform 1 [Macaca mulatta]
gi|383422427|gb|AFH34427.1| nuclear receptor coactivator 1 isoform 1 [Macaca mulatta]
gi|384950036|gb|AFI38623.1| nuclear receptor coactivator 1 isoform 1 [Macaca mulatta]
Length = 1399
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|426334902|ref|XP_004028975.1| PREDICTED: nuclear receptor coactivator 1 isoform 2 [Gorilla
gorilla gorilla]
Length = 1441
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|354469281|ref|XP_003497058.1| PREDICTED: nuclear receptor coactivator 1 [Cricetulus griseus]
Length = 1402
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W +A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQ----EATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|22538455|ref|NP_003734.3| nuclear receptor coactivator 1 isoform 1 [Homo sapiens]
gi|158518533|sp|Q15788.3|NCOA1_HUMAN RecName: Full=Nuclear receptor coactivator 1; Short=NCoA-1;
AltName: Full=Class E basic helix-loop-helix protein 74;
Short=bHLHe74; AltName: Full=Protein Hin-2; AltName:
Full=RIP160; AltName: Full=Renal carcinoma antigen
NY-REN-52; AltName: Full=Steroid receptor coactivator 1;
Short=SRC-1
gi|2924309|emb|CAA04371.1| steroid receptor coactivator [Homo sapiens]
gi|62702258|gb|AAX93184.1| unknown [Homo sapiens]
gi|84105530|gb|AAI11534.1| Nuclear receptor coactivator 1 [Homo sapiens]
gi|119621151|gb|EAX00746.1| nuclear receptor coactivator 1, isoform CRA_a [Homo sapiens]
gi|152112968|gb|ABS29266.1| nuclear receptor coactivator 1 [Homo sapiens]
Length = 1441
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|297265553|ref|XP_002799201.1| PREDICTED: nuclear receptor coactivator 1-like [Macaca mulatta]
Length = 1303
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W +A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQ----EATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|355751157|gb|EHH55412.1| hypothetical protein EGM_04620 [Macaca fascicularis]
Length = 1442
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|351713082|gb|EHB16001.1| Nuclear receptor coactivator 1 [Heterocephalus glaber]
Length = 1442
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|355565510|gb|EHH21939.1| hypothetical protein EGK_05113 [Macaca mulatta]
Length = 1442
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|403288208|ref|XP_003935304.1| PREDICTED: nuclear receptor coactivator 1 [Saimiri boliviensis
boliviensis]
Length = 1441
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|149050860|gb|EDM03033.1| nuclear receptor coactivator 1 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 1401
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|22538459|ref|NP_671766.1| nuclear receptor coactivator 1 isoform 3 [Homo sapiens]
gi|1480646|gb|AAC50631.1| steroid receptor coactivator-1 F-SRC-1 [Homo sapiens]
Length = 1440
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|390474717|ref|XP_003734831.1| PREDICTED: nuclear receptor coactivator 1 isoform 2 [Callithrix
jacchus]
Length = 1399
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W +A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQ----EATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|332812919|ref|XP_003309007.1| PREDICTED: nuclear receptor coactivator 1 [Pan troglodytes]
Length = 1399
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|402890246|ref|XP_003908400.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor coactivator 1
[Papio anubis]
Length = 1386
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W +A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQ----EATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|22538457|ref|NP_671756.1| nuclear receptor coactivator 1 isoform 2 [Homo sapiens]
gi|2924311|emb|CAA04372.1| steroid receptor coactivator 1e [Homo sapiens]
gi|84105441|gb|AAI11535.1| Nuclear receptor coactivator 1 [Homo sapiens]
gi|119621152|gb|EAX00747.1| nuclear receptor coactivator 1, isoform CRA_b [Homo sapiens]
Length = 1399
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W +A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQ----EATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|119621153|gb|EAX00748.1| nuclear receptor coactivator 1, isoform CRA_c [Homo sapiens]
Length = 1369
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|158261061|dbj|BAF82708.1| unnamed protein product [Homo sapiens]
Length = 1399
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W +A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQ----EATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|344239721|gb|EGV95824.1| Nuclear receptor coactivator 1 [Cricetulus griseus]
Length = 1444
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|444726506|gb|ELW67036.1| Nuclear receptor coactivator 1 [Tupaia chinensis]
Length = 1441
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 158/269 (58%), Gaps = 40/269 (14%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAG--------------GENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI S+ ++ Q+D D S CL+C+ARR+ P
Sbjct: 198 RMLIHPPDEPGTESQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRL-PR 252
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ +E F K D +G II +DTS +
Sbjct: 253 PPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|327269761|ref|XP_003219661.1| PREDICTED: nuclear receptor coactivator 2-like [Anolis
carolinensis]
Length = 1459
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 159/270 (58%), Gaps = 42/270 (15%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDH F L+P S VN W+ G+A +R S TFN
Sbjct: 153 ELMNTSVYSILHVGDHNEFVRNLLPKSL-VNGGPWS----GEAPRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQD--------------DSGDVSSEG---GPCLMCVARRI 272
R+L+ LT S G + Q+ + EG CL+CVARR+
Sbjct: 201 RMLVKP--LTD--SEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRV 256
Query: 273 PPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
P ++ L + E F+ + D G I +DTS
Sbjct: 257 PMKERPLPS-SETFSTRQDLQGKITSLDTS 285
>gi|51593639|gb|AAH80866.1| Ncoa1 protein [Mus musculus]
Length = 1330
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W +A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQ----EATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPPE------DPGTENQEACQRYEVMQCFTVSQPKSIQEDGKDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|6754800|ref|NP_035011.1| nuclear receptor coactivator 1 [Mus musculus]
gi|1490876|gb|AAB38841.1| steroid receptor coactivator-1 [Mus musculus]
gi|45829689|gb|AAH68177.1| Nuclear receptor coactivator 1 [Mus musculus]
gi|148669421|gb|EDL01368.1| nuclear receptor coactivator 1, isoform CRA_b [Mus musculus]
Length = 1405
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPPE------DPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|54036169|sp|P70365.2|NCOA1_MOUSE RecName: Full=Nuclear receptor coactivator 1; Short=NCoA-1;
AltName: Full=Nuclear receptor coactivator protein 1;
Short=mNRC-1; AltName: Full=Steroid receptor coactivator
1; Short=SRC-1
Length = 1447
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 157/275 (57%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPPE------DPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|61097961|ref|NP_001012900.1| nuclear receptor coactivator 1 [Gallus gallus]
gi|60099121|emb|CAH65391.1| hypothetical protein RCJMB04_27h20 [Gallus gallus]
Length = 1510
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 154/273 (56%), Gaps = 47/273 (17%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIK---QQET 111
NEKRRREQEN Y+EELAEL+SA + +L+VKPDKC IL++TV+QI+ +K Q++
Sbjct: 30 NEKRRREQENKYLEELAELLSAN--IGDIDTLSVKPDKCKILKKTVDQIQQMKRLEQEKA 87
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 88 ADDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTSYLGYNQE 147
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDH F L+P S VN W + A +R S TF+
Sbjct: 148 ELMNTSVYSILHVGDHTEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFSC 195
Query: 230 RLLISSTH------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARR 271
R+LI T ++ E G+D CL+C+ARR
Sbjct: 196 RMLIRPPDEPGTENQEARQRYEVMQCFTVSQPKSFKEEGEDFQS--------CLICIARR 247
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+P P E F K D +G II +DTS +
Sbjct: 248 LP--RPAAVTPSESFVTKQDTTGKIISIDTSSL 278
>gi|363741616|ref|XP_417385.3| PREDICTED: nuclear receptor coactivator 3 [Gallus gallus]
Length = 1380
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 150/276 (54%), Gaps = 45/276 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 33 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 90
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 91 VSNDDEVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 150
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVY ++H D F L SS AWT+D+ Q + TFN
Sbjct: 151 QEDLVNTSVYGILHEEDRKDFLKNLPKSSVNGVAWTNDAPRQK-----------SHTFNC 199
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+++ ++H RA E G+D C++CV
Sbjct: 200 RMMVKTSHDLLEDVGSHQDTRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 251
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
ARRI ++ E F + D SG ++ +DT+ +
Sbjct: 252 ARRIATAERVFPTNPESFITRHDLSGKLVNIDTNSL 287
>gi|17226620|gb|AAL37875.1|AF443296_1 steroid receptor coactivator-1 [Coturnix japonica]
Length = 1508
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 154/273 (56%), Gaps = 47/273 (17%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIK---QQET 111
NEKRRREQEN Y+EELAEL+SA + +L+VKPDKC IL++TV+QI+ +K Q++
Sbjct: 30 NEKRRREQENKYLEELAELLSAN--IGDIDTLSVKPDKCKILKKTVDQIQQMKRLEQEKA 87
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 88 ADDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTSYLGYNQE 147
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDH F L+P S VN W + A +R S TF+
Sbjct: 148 ELMNTSVYSILHVGDHTEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFSC 195
Query: 230 RLLISSTH------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARR 271
R+LI T ++ E G+D CL+C+ARR
Sbjct: 196 RMLIRPPDEPGTENQEARQRYEVMQCFTVSQPKSFKEEGEDFQS--------CLICIARR 247
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+P P E F K D +G II +DTS +
Sbjct: 248 LP--RPAAVTPSESFVTKQDTTGKIISIDTSSL 278
>gi|327282479|ref|XP_003225970.1| PREDICTED: nuclear receptor coactivator 1-like isoform 2 [Anolis
carolinensis]
Length = 1445
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 161/267 (60%), Gaps = 39/267 (14%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIK---QQET 111
NEKRRREQEN Y+EELA+L+SA + E + SL+VKPDKC IL++TV+QI+ +K Q++T
Sbjct: 31 NEKRRREQENKYLEELADLLSA-NIGE-IDSLSVKPDKCKILKKTVDQIQQMKRLEQEKT 88
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y++
Sbjct: 89 ADDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTSYLGYNQD 148
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W +S +R S TFN
Sbjct: 149 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQES----TRRNS-------HTFNC 196
Query: 230 RLLISSTHLTAGLSRAGGENGQ--------------DDSGDVSSEGGPCLMCVARRIPPT 275
R+L +A ++ + + ++ D+ S CL+C+ARR+P +
Sbjct: 197 RMLTRPPDESAAENQEARQRYEVMQCFTVSQPKLIKEEGEDLQS----CLICIARRLPRS 252
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ E F K D +G II +DTS
Sbjct: 253 TVPTTS--ESFMTKQDTTGKIISIDTS 277
>gi|1490872|gb|AAB06177.1| nuclear receptor co-activator [Mus musculus]
Length = 1447
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 158/269 (58%), Gaps = 40/269 (14%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISST--------------HLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI + + + ++ Q D D S CL+C+ARR+ P
Sbjct: 198 RMLIHPPEDPGTENQEACQRYEVMQRFTVSQPKSIQGDGEDFQS----CLICIARRL-PR 252
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ +E F K D +G II +DTS +
Sbjct: 253 PPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|327282477|ref|XP_003225969.1| PREDICTED: nuclear receptor coactivator 1-like isoform 1 [Anolis
carolinensis]
Length = 1506
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 161/267 (60%), Gaps = 39/267 (14%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIK---QQET 111
NEKRRREQEN Y+EELA+L+SA + E + SL+VKPDKC IL++TV+QI+ +K Q++T
Sbjct: 31 NEKRRREQENKYLEELADLLSA-NIGE-IDSLSVKPDKCKILKKTVDQIQQMKRLEQEKT 88
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y++
Sbjct: 89 ADDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTSYLGYNQD 148
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W +S +R S TFN
Sbjct: 149 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQES----TRRNS-------HTFNC 196
Query: 230 RLLISSTHLTAGLSRAGGENGQ--------------DDSGDVSSEGGPCLMCVARRIPPT 275
R+L +A ++ + + ++ D+ S CL+C+ARR+P +
Sbjct: 197 RMLTRPPDESAAENQEARQRYEVMQCFTVSQPKLIKEEGEDLQS----CLICIARRLPRS 252
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ E F K D +G II +DTS
Sbjct: 253 TVPTTS--ESFMTKQDTTGKIISIDTS 277
>gi|307200818|gb|EFN80871.1| Nuclear receptor coactivator 2 [Harpegnathos saltator]
Length = 848
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 151/269 (56%), Gaps = 35/269 (13%)
Query: 102 QIRNIKQQETS-SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTE 160
QIR+ +QQE S S AVQQGEVSSS P +++N+ + +LLE ++GFLFVVN +G V + T+
Sbjct: 36 QIRHFRQQEGSNSHAVQQGEVSSSNPNILSNDQVVTILLETVDGFLFVVNSEGRVEYVTD 95
Query: 161 NIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTA 220
NI +I Y++ +VLGK +YN+IHHGDH F ++P S +WT+D L
Sbjct: 96 NITQYINYTKDDVLGKDIYNIIHHGDHNTFMRNVLPMSL---SWTND----------LQP 142
Query: 221 STPNRTFNIRLLIS----------------STHLTAGLSRAGGENGQD--DSGDVSSEG- 261
T NRTF+ R L+ S + + + A + D +SGDVSSE
Sbjct: 143 QTRNRTFSCRFLVKPPDDKDETMEEKQQRVSKYESMQVCSAVLPSSADRLESGDVSSESP 202
Query: 262 --GPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQTHTQYLNKAVACK 319
G C+MCVARRI P +K + IEQFT KLD + I+ +DTS +S +++YL K
Sbjct: 203 DIGLCVMCVARRISPNEKPIGTSIEQFTFKLDTTWKIVTVDTSWLSHVYSKYLTKNNLVG 262
Query: 320 TSATVWTCPNSPLTSTKLLLKALLLSICT 348
TS P+ T TK L + L T
Sbjct: 263 TSIKDLCHPHDLTTLTKHLSETFKLGEST 291
>gi|426392033|ref|XP_004062366.1| PREDICTED: nuclear receptor coactivator 3 [Gorilla gorilla gorilla]
Length = 1417
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLATDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERAFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|62089312|dbj|BAD93100.1| nuclear receptor coactivator 3 isoform a variant [Homo sapiens]
Length = 1427
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 162/307 (52%), Gaps = 48/307 (15%)
Query: 23 LISAASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASF 79
+ + E++ LA K + +T Q C EKRRREQE+ YIEELAELISA
Sbjct: 2 IFKMSGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN-- 59
Query: 80 AESMSSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGP 136
+ + VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGP
Sbjct: 60 LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGP 119
Query: 137 LLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVP 196
LLL+AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L
Sbjct: 120 LLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPK 179
Query: 197 SSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH------------------- 237
S+ +WT+++ Q + TFN R+L+ + H
Sbjct: 180 STVNGVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETM 228
Query: 238 --LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGT 295
RA E G+D C++CVARRI ++ + E F + D SG
Sbjct: 229 QCFALSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSGK 280
Query: 296 IIGMDTS 302
++ +DT+
Sbjct: 281 VVNIDTN 287
>gi|431911885|gb|ELK14029.1| Nuclear receptor coactivator 1 [Pteropus alecto]
Length = 1441
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/269 (40%), Positives = 158/269 (58%), Gaps = 40/269 (14%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKSA 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISST--------------HLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI + + + ++ Q+D D S CL+C+ARR+ P
Sbjct: 198 RMLIHPPDEPGIENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRL-PR 252
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ +E F K D +G II +DTS +
Sbjct: 253 PPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|297707280|ref|XP_002830438.1| PREDICTED: nuclear receptor coactivator 3 [Pongo abelii]
Length = 1416
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLATDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGSIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERAFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|348510515|ref|XP_003442791.1| PREDICTED: nuclear receptor coactivator 3 [Oreochromis niloticus]
Length = 1415
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 158/264 (59%), Gaps = 45/264 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
+KRRREQE+ YIEELAELISA ++ S VKPDKCAIL+ETV QIR IK+Q SS
Sbjct: 31 DKRRREQESKYIEELAELISAN--LSNIDSFNVKPDKCAILKETVRQIRQIKEQGKSSCS 88
Query: 114 -DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN +G + F ++N+ +++Y ++E
Sbjct: 89 DDDVQKADVSSTGQGVIDKDHLGPLLLQALDGFLFVVNREGSIVFVSDNVTQYLQYKQEE 148
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNIR 230
++ SVYN+IH D FH L P S+ N W GG+A ++ S TFN R
Sbjct: 149 LINTSVYNIIHDEDREEFHKNL-PKSNAPNGASW----GGEAPRQKS-------HTFNCR 196
Query: 231 LLISSTH-LTAGLS--RAGGENGQ--------------DDSGDVSSEGGPCLMCVARRIP 273
+L++ H T GL RAGG+ + ++ D+ S C++CVARRI
Sbjct: 197 MLVNYVHGQTHGLPEERAGGQRYETMQCFALTQPRAMMEEGDDLQS----CMICVARRIT 252
Query: 274 PTDKQLSAPIEQFTMKLDRSGTII 297
++ E+F+ + + SG +I
Sbjct: 253 AVER-----TERFSTRHELSGKLI 271
>gi|32307124|ref|NP_006525.2| nuclear receptor coactivator 3 isoform b [Homo sapiens]
gi|2331250|gb|AAC51677.1| Amplified in Breast Cancer [Homo sapiens]
gi|111598960|gb|AAI19002.1| Nuclear receptor coactivator 3 [Homo sapiens]
gi|119596108|gb|EAW75702.1| nuclear receptor coactivator 3, isoform CRA_g [Homo sapiens]
Length = 1420
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|291490683|ref|NP_001167558.1| nuclear receptor coactivator 3 isoform c [Homo sapiens]
gi|168277986|dbj|BAG10971.1| nuclear receptor coactivator 3 [synthetic construct]
Length = 1423
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|62204211|gb|AAH92516.1| Nuclear receptor coactivator 3 [Homo sapiens]
Length = 1422
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|32307126|ref|NP_858045.1| nuclear receptor coactivator 3 isoform a [Homo sapiens]
gi|23396777|sp|Q9Y6Q9.1|NCOA3_HUMAN RecName: Full=Nuclear receptor coactivator 3; Short=NCoA-3;
AltName: Full=ACTR; AltName: Full=Amplified in breast
cancer 1 protein; Short=AIB-1; AltName:
Full=CBP-interacting protein; Short=pCIP; AltName:
Full=Class E basic helix-loop-helix protein 42;
Short=bHLHe42; AltName: Full=Receptor-associated
coactivator 3; Short=RAC-3; AltName: Full=Steroid
receptor coactivator protein 3; Short=SRC-3; AltName:
Full=Thyroid hormone receptor activator molecule 1;
Short=TRAM-1
gi|2584880|gb|AAC51849.1| thyroid hormone receptor activator molecule [Homo sapiens]
gi|119596104|gb|EAW75698.1| nuclear receptor coactivator 3, isoform CRA_c [Homo sapiens]
gi|133923377|gb|ABO43042.1| nuclear receptor coactivator 3 [Homo sapiens]
Length = 1424
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|112818455|gb|AAI22548.1| Nuclear receptor coactivator 3 [Homo sapiens]
Length = 1419
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|158260389|dbj|BAF82372.1| unnamed protein product [Homo sapiens]
Length = 1424
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|2707770|gb|AAB92368.1| nuclear receptor coactivator [Homo sapiens]
Length = 1412
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|291490685|ref|NP_001167559.1| nuclear receptor coactivator 3 isoform d [Homo sapiens]
gi|119596107|gb|EAW75701.1| nuclear receptor coactivator 3, isoform CRA_f [Homo sapiens]
Length = 1415
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|1336160|gb|AAB01228.1| steroid receptor coactivator 1a [Mus musculus]
Length = 1405
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 156/275 (56%), Gaps = 52/275 (18%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+E LAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEGLAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVA 269
R+LI G EN Q+D D S CL+C+A
Sbjct: 198 RMLIHPPE------DPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIA 247
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RR+ P ++ +E F K D +G II +DTS +
Sbjct: 248 RRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 280
>gi|449486499|ref|XP_002187351.2| PREDICTED: nuclear receptor coactivator 3 [Taeniopygia guttata]
Length = 1400
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 151/276 (54%), Gaps = 45/276 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 33 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 90
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 91 VSNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 150
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVY ++H D F L SS +WT+++ Q + TFN
Sbjct: 151 QEDLVNTSVYGILHEEDRKDFLKNLPKSSVNGVSWTNETPRQK-----------SHTFNC 199
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+++ S+ RA E G+D C++CV
Sbjct: 200 RMMVKSSRDLVEDVGGYQDIRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 251
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
ARRI T++ A E F + D SG ++ +DT+ +
Sbjct: 252 ARRITTTERVFPANPESFITRHDLSGKLVNIDTNSL 287
>gi|402882317|ref|XP_003904692.1| PREDICTED: nuclear receptor coactivator 3 isoform 2 [Papio anubis]
Length = 1413
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 151/276 (54%), Gaps = 45/276 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 31 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 88
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 89 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 148
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ +WT+++ Q + TFN
Sbjct: 149 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVSWTNETQRQK-----------SHTFNC 197
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + H RA E G+D C++CV
Sbjct: 198 RMLMKTPHDILEDINASPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 249
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
ARRI ++ + E F + D SG ++ +DT+ +
Sbjct: 250 ARRITTGERAFPSNPESFITRHDLSGKVVNIDTNSL 285
>gi|402882315|ref|XP_003904691.1| PREDICTED: nuclear receptor coactivator 3 isoform 1 [Papio anubis]
Length = 1418
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 151/276 (54%), Gaps = 45/276 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 31 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 88
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 89 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 148
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ +WT+++ Q + TFN
Sbjct: 149 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVSWTNETQRQK-----------SHTFNC 197
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + H RA E G+D C++CV
Sbjct: 198 RMLMKTPHDILEDINASPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 249
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
ARRI ++ + E F + D SG ++ +DT+ +
Sbjct: 250 ARRITTGERAFPSNPESFITRHDLSGKVVNIDTNSL 285
>gi|397511412|ref|XP_003826069.1| PREDICTED: nuclear receptor coactivator 3 isoform 2 [Pan paniscus]
Length = 1414
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSGKVVTI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|109091674|ref|XP_001101561.1| PREDICTED: nuclear receptor coactivator 3 isoform 6 [Macaca
mulatta]
Length = 1422
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 150/274 (54%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 31 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 88
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 89 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 148
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ +WT+++ Q + TFN
Sbjct: 149 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVSWTNETQRQK-----------SHTFNC 197
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + H RA E G+D C++CV
Sbjct: 198 RMLMKTPHDILEDINASPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 249
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARRI ++ + E F + D SG ++ +DT+
Sbjct: 250 ARRITTGERAFPSNPESFITRHDLSGKVVNIDTN 283
>gi|397511410|ref|XP_003826068.1| PREDICTED: nuclear receptor coactivator 3 isoform 1 [Pan paniscus]
Length = 1419
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 161/303 (53%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSGKVVTI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|297259629|ref|XP_001101374.2| PREDICTED: nuclear receptor coactivator 3 isoform 4 [Macaca
mulatta]
Length = 1425
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 150/274 (54%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 31 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 88
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 89 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 148
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ +WT+++ Q + TFN
Sbjct: 149 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVSWTNETQRQK-----------SHTFNC 197
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + H RA E G+D C++CV
Sbjct: 198 RMLMKTPHDILEDINASPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 249
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARRI ++ + E F + D SG ++ +DT+
Sbjct: 250 ARRITTGERAFPSNPESFITRHDLSGKVVNIDTN 283
>gi|403282618|ref|XP_003932741.1| PREDICTED: nuclear receptor coactivator 3 [Saimiri boliviensis
boliviensis]
Length = 1371
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 163/302 (53%), Gaps = 47/302 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLATDSRKRKLPCDTPGQGLICSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q +S D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISSDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTAGLS----------------- 243
+WT+++ Q + TFN R+L+ + + ++
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTHDILEDINTSPEMRQRYETMQCFAL 228
Query: 244 ---RAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMD 300
RA E G+D C++CVARRI ++ + E F + D SG ++ +D
Sbjct: 229 SQPRAMMEEGEDLQS--------CMICVARRITTGERVYPSNPESFITRHDLSGKVVNID 280
Query: 301 TS 302
T+
Sbjct: 281 TN 282
>gi|109091676|ref|XP_001101110.1| PREDICTED: nuclear receptor coactivator 3 isoform 1 [Macaca
mulatta]
Length = 1417
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 150/274 (54%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 31 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 88
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 89 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 148
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ +WT+++ Q + TFN
Sbjct: 149 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVSWTNETQRQK-----------SHTFNC 197
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + H RA E G+D C++CV
Sbjct: 198 RMLMKTPHDILEDINASPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 249
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARRI ++ + E F + D SG ++ +DT+
Sbjct: 250 ARRITTGERAFPSNPESFITRHDLSGKVVNIDTN 283
>gi|332207740|ref|XP_003252954.1| PREDICTED: nuclear receptor coactivator 3 isoform 2 [Nomascus
leucogenys]
Length = 1410
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 160/303 (52%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLATDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKC IL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCTILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERAFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|332207738|ref|XP_003252953.1| PREDICTED: nuclear receptor coactivator 3 isoform 1 [Nomascus
leucogenys]
Length = 1415
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 160/303 (52%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLATDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKC IL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCTILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERAFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|395507046|ref|XP_003757839.1| PREDICTED: nuclear receptor coactivator 1 [Sarcophilus harrisii]
Length = 1442
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 153/273 (56%), Gaps = 48/273 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E
Sbjct: 32 EKRRREQENKYLEELAELLSAN--IGDIDSLSVKPDKCKILKKTVDQIQQMKRMEQEKTA 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTH------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARR 271
R+LI T ++ E G+D CL+C+ARR
Sbjct: 198 RMLIRPPDEPGTENQEACQRYEVMQCFTVSQPKSIQEEGEDFQS--------CLICIARR 249
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+P + E F K D +G II +DTS +
Sbjct: 250 LPRPAAITGS--ESFMTKQDTTGKIISIDTSSL 280
>gi|194224502|ref|XP_001916932.1| PREDICTED: nuclear receptor coactivator 3 [Equus caballus]
Length = 1404
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 149/274 (54%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 90 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 149
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ AWTS++ Q + TFN
Sbjct: 150 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVAWTSETQRQK-----------SHTFNC 198
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + H RA E G+D C++CV
Sbjct: 199 RMLMKTPHDVLEDINTSPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 250
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARRI ++ + E F + D SG ++ +DT+
Sbjct: 251 ARRITTGERAFPSNPESFITRHDLSGKVVNIDTN 284
>gi|332858657|ref|XP_003317033.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor coactivator 3 [Pan
troglodytes]
Length = 1422
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 150/274 (54%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 31 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 88
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 89 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 148
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ +WT+++ Q + TFN
Sbjct: 149 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVSWTNETQRQK-----------SHTFNC 197
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + H RA E G+D C++CV
Sbjct: 198 RMLMKTPHDILEDINASPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 249
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARRI ++ + E F + D SG ++ +DT+
Sbjct: 250 ARRITTGERTFPSNPESFITRHDLSGKVVTIDTN 283
>gi|432930064|ref|XP_004081302.1| PREDICTED: nuclear receptor coactivator 2-like [Oryzias latipes]
Length = 1508
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 158/275 (57%), Gaps = 49/275 (17%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
NEKR RE EN YIEELAELI A+F + + + VKPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 NEKRNREHENKYIEELAELI-FANFND-IDNFNVKPDKCAILKETVKQIRQIKEQEKAAA 92
Query: 115 A----VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSR 170
A VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G + F +EN+ ++RY++
Sbjct: 93 ANEEEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNMEGNIVFVSENVTQYLRYNQ 152
Query: 171 QEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFN 228
+E++ SVY+++H GDHA F L+P S VN W+S+ G R + + TFN
Sbjct: 153 EELMNTSVYSVLHVGDHAEFIKNLLPKS-LVNGVPWSSE-----GPRRN------SHTFN 200
Query: 229 IRLLISS-------TH--------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMC 267
R+L++ TH ++ E G D CL+C
Sbjct: 201 CRMLVNPRSESQDETHEHEPQQQKYETMQCFAVSEPKSIKEEGDDFQS--------CLIC 252
Query: 268 VARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
VARR+P ++ L E FT + D G I +DTS
Sbjct: 253 VARRVPTKERPLPPTHESFTTRQDLQGKITSLDTS 287
>gi|334312419|ref|XP_003339744.1| PREDICTED: nuclear receptor coactivator 1 [Monodelphis domestica]
Length = 1326
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/273 (39%), Positives = 153/273 (56%), Gaps = 48/273 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E
Sbjct: 32 EKRRREQENKYLEELAELLSAN--IGDIDSLSVKPDKCKILKKTVDQIQQMKRMEQEKTA 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS +I E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGMIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLISSTH------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARR 271
R+LI T ++ E G+D CL+C+ARR
Sbjct: 198 RMLIRPPDEPGTENQEACQRYEVMQCFTVSQPKSIQEEGEDFQS--------CLICIARR 249
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+P + E F K D +G II +DTS +
Sbjct: 250 LPRPAAITGS--ESFMTKQDTTGKIISIDTSSL 280
>gi|301783257|ref|XP_002927046.1| PREDICTED: nuclear receptor coactivator 3-like [Ailuropoda
melanoleuca]
Length = 1408
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 151/274 (55%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 90 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 149
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ AWT+++ Q + TFN
Sbjct: 150 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVAWTNETQRQK-----------SHTFNC 198
Query: 230 RLLISSTH-----LTAGL----------------SRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + H L G RA E G+D C++CV
Sbjct: 199 RMLMKTPHDILEDLNTGPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 250
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARRI ++ + E F + D SG ++ +DT+
Sbjct: 251 ARRITTGERAFPSNPESFITRHDLSGKVVNIDTN 284
>gi|317418993|emb|CBN81031.1| Ncoa3 protein [Dicentrarchus labrax]
Length = 1436
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/264 (41%), Positives = 157/264 (59%), Gaps = 45/264 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
+KRRREQE+ YIEELAELISA ++ S VKPDKCAIL+ETV QIR IK+Q SS
Sbjct: 31 DKRRREQESKYIEELAELISAN--LSNIDSFNVKPDKCAILKETVRQIRQIKEQGKSSCS 88
Query: 114 -DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN +G + F ++N+ +++Y ++E
Sbjct: 89 DDDVQKADVSSTGQGVIDKDHLGPLLLQALDGFLFVVNREGSIVFVSDNVTQYLQYKQEE 148
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNIR 230
++ SVYN+IH D FH L P +H N W GG+A ++ S TFN R
Sbjct: 149 LINTSVYNIIHDEDREEFHKNL-PKAHAPNGASW----GGEAPRQKS-------HTFNCR 196
Query: 231 LLISSTH-LTAGLS--RAGGENGQ--------------DDSGDVSSEGGPCLMCVARRIP 273
+L++ H + GL R GG+ + ++ D+ S C++CVARRI
Sbjct: 197 MLVNFVHGQSHGLPEERPGGQRYETMQCFALTQPRAMMEEGEDLQS----CMICVARRII 252
Query: 274 PTDKQLSAPIEQFTMKLDRSGTII 297
++ E+F+ + + SG +I
Sbjct: 253 AVER-----TERFSTRHELSGKLI 271
>gi|327271830|ref|XP_003220690.1| PREDICTED: nuclear receptor coactivator 3-like [Anolis
carolinensis]
Length = 1393
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 151/276 (54%), Gaps = 45/276 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ--- 109
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 33 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 90
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 91 ASADDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 150
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ S+Y+++H D F L S+ +WT+++ Q + TFN
Sbjct: 151 QEDLVNTSIYSILHEEDRKDFLKNLPKSAVNGVSWTNEAPRQK-----------SHTFNC 199
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+++ + H RA E G+D C++CV
Sbjct: 200 RMMVKTIHDLLEDVGSNQDTHQRFETMQCFALSQPRAMLEEGEDLQS--------CMICV 251
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
ARRI ++ S E F + D SG ++ +DT+ +
Sbjct: 252 ARRISAMERVFSPNTESFVTRHDLSGKLVNIDTNSL 287
>gi|390462669|ref|XP_002747674.2| PREDICTED: nuclear receptor coactivator 3 [Callithrix jacchus]
Length = 1418
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 162/302 (53%), Gaps = 47/302 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLATDSRKRKLPCDTPGQGLICSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKC IL+ETV QIR IK+Q +S D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCVILKETVRQIRQIKEQGKTISSDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTAGLS----------------- 243
+WT+++ Q + TFN R+L+ + + ++
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTHDILEDINTGPEMRQRYETMQCFAL 228
Query: 244 ---RAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMD 300
RA E G+D C++CVARRI ++ + E F + D SG ++ +D
Sbjct: 229 SQPRAMMEEGEDLQS--------CMICVARRITTGERVYPSNPESFITRHDLSGKVVNID 280
Query: 301 TS 302
T+
Sbjct: 281 TN 282
>gi|395862708|ref|XP_003803576.1| PREDICTED: nuclear receptor coactivator 2-like, partial [Otolemur
garnettii]
Length = 277
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 145/253 (57%), Gaps = 29/253 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQD----------DSGDVSSEGGP---CLMCVARRIPPTDKQ 278
L+ + E Q + EG CL+CVARR+P ++
Sbjct: 203 LVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERP 262
Query: 279 LSAPIEQFTMKLD 291
+ E FT + D
Sbjct: 263 VLPSSESFTTRQD 275
>gi|47227301|emb|CAF96850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 366
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 155/266 (58%), Gaps = 43/266 (16%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
+KRRREQE+ YIEELAELISA ++ S VKPDKCAIL+ETV QIR IK+Q S+
Sbjct: 31 DKRRREQESKYIEELAELISAN--LSNIDSFNVKPDKCAILKETVRQIRQIKEQGKSACS 88
Query: 114 -DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN +G + F ++N+ +++Y ++E
Sbjct: 89 DDDVQKADVSSTGQGVIDKDHLGPLLLQALDGFLFVVNREGSIVFVSDNVTQYLQYKQEE 148
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVYN+IH D FH L S+ AW GG+ ++ S TFN R+L
Sbjct: 149 LINTSVYNIIHDEDREEFHKNLPKSNVSNGAW----GGETPRQKS-------HTFNCRML 197
Query: 233 ISSTH-LTAGLSRAGGENGQ-----------------DDSGDVSSEGGPCLMCVARRIPP 274
+++ H GL+ GQ ++ D+ S C++CVARRI
Sbjct: 198 VNTVHGQNHGLTEERPPGGQRYETMQCFALTQPRAMMEEGEDLHS----CMICVARRIIV 253
Query: 275 TDKQLSAPIEQFTMKLDRSGTIIGMD 300
++ E+F+ + + SG ++ ++
Sbjct: 254 VER-----TERFSTRHELSGKLVEIE 274
>gi|89266939|emb|CAJ81360.1| nuclear receptor coactivator 3 [Xenopus (Silurana) tropicalis]
Length = 729
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 151/276 (54%), Gaps = 45/276 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETS 112
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +
Sbjct: 33 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 90
Query: 113 S---DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
S D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN +G + F +EN+ +++Y
Sbjct: 91 SSNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNREGSIVFVSENVTQYLQYK 150
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVY+++H D F L S+ W+S++ Q + TFN
Sbjct: 151 QEDLVNTSVYSILHEEDRKDFLKNLPKSTVNGVPWSSETPRQK-----------SHTFNC 199
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ ++H RA E G+D C++CV
Sbjct: 200 RMLVKTSHDHLEDGSGNLDTRQRYETMQCFALSQPRAMIEEGEDLQS--------CMICV 251
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
ARRI ++ SA E F + D +G ++ +D + +
Sbjct: 252 ARRITTVERVFSANPESFITRHDLTGKVVNIDANSL 287
>gi|348564117|ref|XP_003467852.1| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor coactivator 3-like
[Cavia porcellus]
Length = 1418
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 151/276 (54%), Gaps = 45/276 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 90 VSNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 149
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVY+++H D F L S+ +WT+++ Q + TFN
Sbjct: 150 QEDLVNTSVYSILHEEDRKDFLKNLPKSTVNGVSWTNETQRQK-----------SHTFNC 198
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+LI +TH RA E G+D C++CV
Sbjct: 199 RMLIKTTHDVLEDMNTSQEMRHRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 250
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
ARRI ++ + E F + D SG ++ +DT+ +
Sbjct: 251 ARRITTGERAFPSNPESFITRHDLSGKVVNIDTNSL 286
>gi|348520006|ref|XP_003447520.1| PREDICTED: nuclear receptor coactivator 2-like [Oreochromis
niloticus]
Length = 1542
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 149/266 (56%), Gaps = 35/266 (13%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETS--- 112
E+R REQEN YIEELAELI A M L VKPDKCAIL+ETV QIR IK+QE +
Sbjct: 37 ERRNREQENKYIEELAELIFAN--INDMDDLNVKPDKCAILKETVKQIRQIKEQEKAPVA 94
Query: 113 -SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
++ VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G + F +EN+ ++RY ++
Sbjct: 95 DAEEVQKADVSSTGQGVIDKDTLGPMMLEALDGFFFVVNMEGNIVFVSENVSQYLRYQQE 154
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ SVY+++H GDH F L+P S VN S ++ + TFN R+
Sbjct: 155 ELMNTSVYSVLHVGDHTEFIKNLLPKS-LVNHRDS-------------SNRNSHTFNCRM 200
Query: 232 LISS-THLTAGLSRAGGENGQD-----------DSGDVSSEG---GPCLMCVARRIPPTD 276
LI+ A L+ E Q + + EG CL+CVARR P +
Sbjct: 201 LINPHADGEARLASDQQEAAQQKYETMQCFAVSEPKSIREEGEDFQSCLICVARRAPVKE 260
Query: 277 KQLSAPIEQFTMKLDRSGTIIGMDTS 302
+ + E FT + D G I +DTS
Sbjct: 261 RPVMPTYESFTTRQDLQGKITSLDTS 286
>gi|344279734|ref|XP_003411642.1| PREDICTED: nuclear receptor coactivator 3 [Loxodonta africana]
Length = 1427
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 148/274 (54%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+S D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 90 ISSDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 149
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ AWT+++ Q + TFN
Sbjct: 150 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVAWTNETQRQK-----------SHTFNC 198
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + RA E G+D C++CV
Sbjct: 199 RMLMKTPQDILEDISTSPEVRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 250
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARRI ++ A E F + D SG ++ +DT+
Sbjct: 251 ARRITTGERAFPANPESFITRHDLSGKVVNIDTN 284
>gi|334312370|ref|XP_001379309.2| PREDICTED: nuclear receptor coactivator 3 [Monodelphis domestica]
Length = 1326
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 149/273 (54%), Gaps = 45/273 (16%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EK RREQE+ Y+EELAELISA + S VKPDKCAIL+ETV QIR IK+Q ++
Sbjct: 35 EKWRREQESKYLEELAELISAN--LSDIDSFNVKPDKCAILKETVRQIRQIKEQGKAASI 92
Query: 114 -DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++
Sbjct: 93 DDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGTIVFVSENVTQYLQYKQED 152
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVY+++H D F L S+ + WTS++ Q + TFN R+L
Sbjct: 153 LVNTSVYSILHEDDRKDFLKNLPKSAVNGDPWTSETPRQK-----------SHTFNCRML 201
Query: 233 ISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARR 271
+ + H RA E G+D C++CVARR
Sbjct: 202 VKTVHDILDDVGNSPDMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICVARR 253
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+ ++ + E F K D SG +I +DT+ +
Sbjct: 254 LTAVERVFPSNPESFITKHDLSGKVITIDTNSL 286
>gi|301607219|ref|XP_002933204.1| PREDICTED: nuclear receptor coactivator 3 [Xenopus (Silurana)
tropicalis]
Length = 1395
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/305 (34%), Positives = 157/305 (51%), Gaps = 52/305 (17%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETS 112
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +
Sbjct: 33 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 90
Query: 113 S---DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
S D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN +G + F +EN+ +++Y
Sbjct: 91 SSNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNREGSIVFVSENVTQYLQYK 150
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVY+++H D F L S+ W+S++ Q + TFN
Sbjct: 151 QEDLVNTSVYSILHEEDRKDFLKNLPKSTVNGVPWSSETPRQK-----------SHTFNC 199
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ ++H RA E G+D C++CV
Sbjct: 200 RMLVKTSHDHLEDGSGNLDTRQRYETMQCFALSQPRAMIEEGEDLQS--------CMICV 251
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQTHTQYLNKAVA-------CKTS 321
ARRI ++ SA E F + D +G ++ +D + + + + C +
Sbjct: 252 ARRITTVERVFSANPESFITRHDLTGKVVNIDANSLRSSMRPGFEDTIRRCIQRFLCHSD 311
Query: 322 ATVWT 326
WT
Sbjct: 312 GQPWT 316
>gi|410909103|ref|XP_003968030.1| PREDICTED: nuclear receptor coactivator 2-like [Takifugu rubripes]
Length = 1557
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 157/267 (58%), Gaps = 33/267 (12%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
NEKR REQEN YIEELAELI A+F + + + VKPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 NEKRNREQENKYIEELAELI-FANFND-IDNFNVKPDKCAILKETVKQIRQIKEQEKAAA 92
Query: 115 A----VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSR 170
A VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G + F +EN+ ++ Y++
Sbjct: 93 ANEEEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNMEGNIVFVSENVTQYLHYNQ 152
Query: 171 QEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFN 228
+E++ SVY+++H GDHA F L+P S VN W+S+ G R + + TFN
Sbjct: 153 EELMNTSVYSVLHVGDHAEFIKNLLPKS-LVNGVPWSSE-----GPRRN------SHTFN 200
Query: 229 IRLLISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGG---PCLMCVARRIPPT 275
R+L++ S Q + + EG CL+CVARR+P
Sbjct: 201 CRMLVNPHSENPEESHEHEPQQQKYETMQCFAVSEPKSIKEEGDDLQSCLICVARRVPMK 260
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ + E FT + D G I +DTS
Sbjct: 261 ERPILPTHESFTTRQDLQGKITSLDTS 287
>gi|317419883|emb|CBN81919.1| Nuclear receptor coactivator 2 [Dicentrarchus labrax]
Length = 1550
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 157/267 (58%), Gaps = 33/267 (12%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
NEKR RE EN YIEELAELI A+F + + + VKPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 NEKRNREHENKYIEELAELI-FANFND-IDNFNVKPDKCAILKETVKQIRQIKEQEKAAA 92
Query: 115 A----VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSR 170
A VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G + F +EN+ ++RY++
Sbjct: 93 ANEEEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNMEGNIVFVSENVTQYLRYNQ 152
Query: 171 QEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFN 228
+E++ SVY+++H GDHA F L+P S VN W+S+ G R + + TFN
Sbjct: 153 EELMNTSVYSVLHVGDHAEFIKNLLPKS-LVNGVPWSSE-----GPRRN------SHTFN 200
Query: 229 IRLLISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGG---PCLMCVARRIPPT 275
R+L++ + Q + + EG CL+CVARR+P
Sbjct: 201 CRMLVNPHSESQDEPHEHEPQQQKYETMQCFAVSEPKSIKEEGDDFQSCLICVARRVPMK 260
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ + E FT + D G I +DTS
Sbjct: 261 ERPMLPAHESFTTRQDLQGKITSLDTS 287
>gi|432859852|ref|XP_004069268.1| PREDICTED: nuclear receptor coactivator 3-like [Oryzias latipes]
Length = 1453
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 154/262 (58%), Gaps = 42/262 (16%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
+KR REQE+ YIEELAELISA ++ S VKPDKCAIL+ETV QIR IK+Q SS
Sbjct: 31 DKRLREQESKYIEELAELISAN--LSNIDSFNVKPDKCAILKETVRQIRQIKEQGPSSCS 88
Query: 114 -DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN +G + F ++N+ +++Y ++E
Sbjct: 89 DDDVQKADVSSTGQGVIDKDHLGPLLLQALDGFLFVVNREGSIVFVSDNVTQYLQYKQEE 148
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVYN+IH + FH L + W GG+A ++ S TFN R+L
Sbjct: 149 LINTSVYNIIHDDNREEFHKNLPKPNGPNGQW----GGEAPRQKS-------HTFNCRML 197
Query: 233 ISSTH-LTAGLS--RAGGENGQ--------------DDSGDVSSEGGPCLMCVARRIPPT 275
++ H + GLS R GG+ + ++ D+ S C++CVARRI
Sbjct: 198 VNLAHGASHGLSEDRPGGQRYETMQCFALTQPRAMMEEGDDLQS----CMICVARRITAV 253
Query: 276 DKQLSAPIEQFTMKLDRSGTII 297
++ E+FT + + SG +I
Sbjct: 254 ER-----TERFTTRHELSGKLI 270
>gi|2318006|gb|AAC51663.1| receptor-associated coactivator 3 [Homo sapiens]
Length = 1417
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 160/303 (52%), Gaps = 48/303 (15%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN + + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNREANIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGM 299
RA E G+D C++CVARRI ++ + E F + D SG ++ +
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSGKVVNI 280
Query: 300 DTS 302
DT+
Sbjct: 281 DTN 283
>gi|345328215|ref|XP_001506517.2| PREDICTED: nuclear receptor coactivator 3 [Ornithorhynchus
anatinus]
Length = 1531
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 150/274 (54%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETS 112
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +
Sbjct: 32 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 113 S---DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 90 TPNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 149
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVY+++H D F L S+ AWT+++ Q + TFN
Sbjct: 150 QEDLVNTSVYSILHEEDRKDFLKNLPKSAVNGVAWTNETPKQK-----------SHTFNC 198
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+ + ++H RA E G+D C++CV
Sbjct: 199 RMSVKTSHDLLEDVGSSPDPRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 250
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARR+ ++ + E F + D SG ++ +DT+
Sbjct: 251 ARRLTTVERVFPSNPESFITRHDLSGKVVNIDTN 284
>gi|291409977|ref|XP_002721268.1| PREDICTED: nuclear receptor coactivator 2 [Oryctolagus cuniculus]
Length = 1378
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 147/273 (53%), Gaps = 45/273 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETS 112
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +
Sbjct: 7 CTGEKWRREQESKYIEELAELISAN--LSDIDTFNVKPDKCAILKETVRQIRQIKEQGKT 64
Query: 113 ---SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 65 ICNDDDVQKADVSSTGQGVIDKDALGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 124
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ +W++++ Q + TFN
Sbjct: 125 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVSWSNETQRQK-----------SHTFNC 173
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + H RA E G+D C++CV
Sbjct: 174 RMLMKAAHGLLEDINTSPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 225
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDT 301
ARRI ++ + E F + D SG ++ +DT
Sbjct: 226 ARRITTGERAFPSNPESFITRHDLSGKVVNIDT 258
>gi|395829159|ref|XP_003787728.1| PREDICTED: nuclear receptor coactivator 3 [Otolemur garnettii]
Length = 1419
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 150/274 (54%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 90 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 149
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVY+++H D F L S+ +WT+++ Q + TFN
Sbjct: 150 QEDLVNTSVYSILHEEDRKDFLKNLPKSTVNGVSWTNETQRQK-----------SHTFNC 198
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + H RA E G+D C++CV
Sbjct: 199 RMLMKTPHDILEDINTNPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 250
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARRI ++ S+ E F + D SG ++ +DT+
Sbjct: 251 ARRITTGERAFSSNPESFITRHDLSGKVVNIDTN 284
>gi|410953786|ref|XP_003983551.1| PREDICTED: nuclear receptor coactivator 3 [Felis catus]
Length = 1443
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 149/274 (54%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 90 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 149
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVY+++H D F L S+ AWT+++ Q + TFN
Sbjct: 150 QEDLVNTSVYSILHEEDRKDFLKNLPKSTVNGVAWTNETQRQK-----------SHTFNC 198
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + H RA E G+D C++CV
Sbjct: 199 RMLMKTPHDILEDINTNPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 250
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARRI ++ + E F + D SG ++ +DT+
Sbjct: 251 ARRITTGERAFPSNPESFITRHDLSGKVVNIDTN 284
>gi|73992554|ref|XP_543039.2| PREDICTED: nuclear receptor coactivator 3 [Canis lupus familiaris]
Length = 1416
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 149/274 (54%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 90 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 149
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVY+++H D F L S+ AWT+++ Q + TFN
Sbjct: 150 QEDLVNTSVYSILHEEDRKDFLKNLPKSTVNGVAWTNETQRQK-----------SHTFNC 198
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ + H RA E G+D C++CV
Sbjct: 199 RMLMKTPHDILEDINTSPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 250
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARRI ++ + E F + D SG ++ +DT+
Sbjct: 251 ARRITTGERAFPSNPESFITRHDLSGKVVNIDTN 284
>gi|297482098|ref|XP_002692539.1| PREDICTED: nuclear receptor coactivator 3 [Bos taurus]
gi|358415211|ref|XP_602010.4| PREDICTED: nuclear receptor coactivator 3 [Bos taurus]
gi|296480967|tpg|DAA23082.1| TPA: nuclear receptor coactivator 3-like [Bos taurus]
Length = 1411
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 147/274 (53%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
TS D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN +G + F +EN+ +++Y
Sbjct: 90 ITSDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNREGNIVFVSENVTQYLQYK 149
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ WT+++ Q + TFN
Sbjct: 150 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVTWTNETQRQK-----------SHTFNC 198
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ H RA E G+D C++CV
Sbjct: 199 RMLMKIPHDILEDINTSPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 250
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARRI ++ + E F + D SG +I +DT+
Sbjct: 251 ARRITTGERAFPSSPESFITRHDLSGKVITIDTN 284
>gi|387017412|gb|AFJ50824.1| Nuclear receptor coactivator 3-like [Crotalus adamanteus]
Length = 1392
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 159/298 (53%), Gaps = 46/298 (15%)
Query: 31 ESMSSLAVKPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKP 90
+SM+S + K C I + C EKRRREQE YIEELAELISA + VKP
Sbjct: 10 DSMNSDSRKRKPCDITGTGL-VCSGEKRRREQETKYIEELAELISAN--LSDIDHFNVKP 66
Query: 91 DKCAILQETVNQIRNIKQQ---ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLF 147
DKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLF
Sbjct: 67 DKCAILKETVRQIRQIKEQGKTASTDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLF 126
Query: 148 VVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD 207
VVN DG + F +EN+ +++Y +++++ SVY+++H D F L S+ +WT++
Sbjct: 127 VVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYSILHEEDRKDFLKNLPKSAVNGVSWTNE 186
Query: 208 SGGQAGKRPSLTASTPNRTFNIRLLISS-------------TH--------LTAGLSRAG 246
+ Q + TFN R+++ +H RA
Sbjct: 187 APRQK-----------SHTFNCRMMVKPLKELLEDIGSSQESHQRFETMQCFALSQPRAM 235
Query: 247 GENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
E G+D C++CVARRI ++ S E F + D SG ++ +DT+ +
Sbjct: 236 LEEGEDLQS--------CMICVARRISTIERVFSPNTESFVTRHDLSGKLVNIDTNSL 285
>gi|426241589|ref|XP_004014672.1| PREDICTED: nuclear receptor coactivator 3 [Ovis aries]
Length = 1407
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 147/274 (53%), Gaps = 45/274 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+S D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN +G + F +EN+ +++Y
Sbjct: 90 ISSDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNREGNIVFVSENVTQYLQYK 149
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ WT+++ Q + TFN
Sbjct: 150 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVTWTNETQRQK-----------SHTFNC 198
Query: 230 RLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCV 268
R+L+ H RA E G+D C++CV
Sbjct: 199 RMLMKIPHDILEDINTSPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICV 250
Query: 269 ARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
ARRI ++ + E F + D SG +I +DT+
Sbjct: 251 ARRITTGERAFPSSPESFITRHDLSGKVITIDTN 284
>gi|119596102|gb|EAW75696.1| nuclear receptor coactivator 3, isoform CRA_a [Homo sapiens]
Length = 322
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 156/298 (52%), Gaps = 48/298 (16%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q ++ D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH---------------------LT 239
+WT+++ Q + TFN R+L+ + H
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 240 AGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTII 297
RA E G+D C++CVARRI ++ + E F + D S ++
Sbjct: 229 LSQPRAMMEEGEDLQS--------CMICVARRITTGERTFPSNPESFITRHDLSDGVL 278
>gi|432096834|gb|ELK27412.1| Nuclear receptor coactivator 1 [Myotis davidii]
Length = 1422
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 160/297 (53%), Gaps = 55/297 (18%)
Query: 3 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQ 62
CL+++ R+ ++ L ++S + S K C L + EKRRREQ
Sbjct: 14 CLDQESNRDLLGVKFFNMSGLGDSSSDPANPDSHKRKGSPCDTLASST-----EKRRREQ 68
Query: 63 ENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----TSSDAVQQ 118
EN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T+ D VQ+
Sbjct: 69 ENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKSTADDEVQK 126
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++E++ SV
Sbjct: 127 SDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQEELMNTSV 186
Query: 179 YNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNIRLLISST 236
Y+++H GDHA F L+P S VN W + A +R S TFN R+LI
Sbjct: 187 YSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNCRMLIHPP 234
Query: 237 HLTAGLSRAGGENG--------------------QDDSGDVSSEGGPCLMCVARRIP 273
G EN Q+D D S CL+C+ARR+P
Sbjct: 235 ------DEPGTENPEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLP 281
>gi|281343860|gb|EFB19444.1| hypothetical protein PANDA_016743 [Ailuropoda melanoleuca]
Length = 1381
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 151/276 (54%), Gaps = 47/276 (17%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 3 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 60
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEA--LEGFLFVVNPDGYVNFCTENIKSFIR 167
++ D VQ+ +VSS+ VI + LGPLLL+A L+GFLFVVN DG + F +EN+ +++
Sbjct: 61 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQASALDGFLFVVNRDGNIVFVSENVTQYLQ 120
Query: 168 YSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTF 227
Y +++++ SVYN++H D F L S+ AWT+++ Q + TF
Sbjct: 121 YKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVAWTNETQRQK-----------SHTF 169
Query: 228 NIRLLISSTH-----LTAGL----------------SRAGGENGQDDSGDVSSEGGPCLM 266
N R+L+ + H L G RA E G+D C++
Sbjct: 170 NCRMLMKTPHDILEDLNTGPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMI 221
Query: 267 CVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
CVARRI ++ + E F + D SG ++ +DT+
Sbjct: 222 CVARRITTGERAFPSNPESFITRHDLSGKVVNIDTN 257
>gi|148227922|ref|NP_001081732.1| nuclear receptor coactivator 3 [Xenopus laevis]
gi|23396770|sp|O57539.1|NCOA3_XENLA RecName: Full=Nuclear receptor coactivator 3; AltName:
Full=Retinoid X receptor-interacting coactivator xSRC-3
gi|2852394|gb|AAC12927.1| retinoid X receptor-interacting coactivator xSRC-3 [Xenopus laevis]
Length = 1391
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 150/275 (54%), Gaps = 44/275 (16%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETS 112
C EKRRREQE+ YIEELA+LISA + + VKPDKCAIL+ETV QIR IK+Q +
Sbjct: 33 CSGEKRRREQESKYIEELADLISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 90
Query: 113 S---DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
S D VQ+ +VSS+ VI + LGPLLL+AL+GFL+VVN +G + F +EN+ +++Y
Sbjct: 91 SSNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLYVVNREGSIVFVSENVTQYLQYK 150
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVY+++H D F L S+ W S++ Q + TFN
Sbjct: 151 QEDLVNTSVYSILHEEDRKDFLKNLPKSTVNGVPWFSETPRQK-----------SHTFNC 199
Query: 230 RLLISSTH--------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVA 269
R+L+ ++H RA E G+D C++CVA
Sbjct: 200 RMLVKTSHDHLEDGSNLDARQRYETMQCFALSQPRAMIEEGEDLQS--------CMICVA 251
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
RRI ++ SA E F + D +G ++ +D + +
Sbjct: 252 RRITTAERAFSANPESFITRHDLTGKVVNIDANSL 286
>gi|395506871|ref|XP_003757753.1| PREDICTED: nuclear receptor coactivator 3 [Sarcophilus harrisii]
Length = 1403
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 48/273 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EK RREQE+ Y+EELAELISA + S VKPDKCAIL+ETV QIR IK+Q ++
Sbjct: 35 EKWRREQESKYLEELAELISAN--LSDIDSFNVKPDKCAILKETVRQIRQIKEQGKATSI 92
Query: 114 -DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++
Sbjct: 93 DDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGTIVFVSENVTQYLQYKQED 152
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVY+++H D F L S+ + WTS++ Q + TFN R+L
Sbjct: 153 LVNTSVYSILHEDDRKDFLKNLPKSAVNGDPWTSEAPRQK-----------SHTFNCRML 201
Query: 233 ISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARR 271
+ + H RA E G+D C++CVARR
Sbjct: 202 VKTVHDILDEVGSSPDMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICVARR 253
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
I T S P E F K D SG ++ +DT+ +
Sbjct: 254 I--TTVFPSNP-ESFITKHDLSGKVVTIDTNSL 283
>gi|344241560|gb|EGV97663.1| Nuclear receptor coactivator 3 [Cricetulus griseus]
Length = 1211
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 151/270 (55%), Gaps = 44/270 (16%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE---TS 112
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +S
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISS 92
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++
Sbjct: 93 DDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQED 152
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVY+++H D F L S+ +WT+++ Q + TFN R+L
Sbjct: 153 LVNTSVYSILHEQDRKDFLKHLPKSTVNGVSWTNETQRQK-----------SHTFNCRML 201
Query: 233 ISSTHLTAGLS--------------------RAGGENGQDDSGDVSSEGGPCLMCVARRI 272
+ + + +S RA E G+D C++CVARR+
Sbjct: 202 MKTHDILEDMSASPETRQRYETMQCFALSQPRAMLEEGEDLQC--------CMICVARRV 253
Query: 273 PPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ L + E F + D SG ++ +DT+
Sbjct: 254 TTGERTLPSSPESFITRHDLSGKVVNIDTN 283
>gi|449283960|gb|EMC90543.1| Nuclear receptor coactivator 3, partial [Columba livia]
Length = 1413
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 149/286 (52%), Gaps = 57/286 (19%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 37 CGGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVKQIRQIKEQGKA 94
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEA------------LEGFLFVVNPDGYVNF 157
++ D VQ+ +VSS+ VI + LGPLLL+A L+GFLFVVN DG + F
Sbjct: 95 VSNDDDVQKADVSSTGQGVIDKDSLGPLLLQAMCLTRCHVNTQALDGFLFVVNRDGNIVF 154
Query: 158 CTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPS 217
+EN+ +++Y +++++ SVY ++H D F L SS AWT+++ Q
Sbjct: 155 VSENVTQYLQYKQEDLVNTSVYGILHEEDRKDFLKNLPKSSVNGVAWTNETPRQK----- 209
Query: 218 LTASTPNRTFNIRLLISSTH---------------------LTAGLSRAGGENGQDDSGD 256
+ TFN R+++ ++H RA E G+D
Sbjct: 210 ------SHTFNCRMMVKTSHDLLEDVGSLPDTRQRYETMQCFALSQPRAMMEEGEDLQS- 262
Query: 257 VSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
C++CVARRI ++ E F + D SG ++ +DT+
Sbjct: 263 -------CMICVARRITTAERAFPTNPESFITRHDLSGKLVNIDTN 301
>gi|354476756|ref|XP_003500589.1| PREDICTED: nuclear receptor coactivator 3 [Cricetulus griseus]
Length = 1395
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 151/270 (55%), Gaps = 44/270 (16%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE---TS 112
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +S
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISS 92
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++
Sbjct: 93 DDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQED 152
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVY+++H D F L S+ +WT+++ Q + TFN R+L
Sbjct: 153 LVNTSVYSILHEQDRKDFLKHLPKSTVNGVSWTNETQRQK-----------SHTFNCRML 201
Query: 233 ISSTHLTAGLS--------------------RAGGENGQDDSGDVSSEGGPCLMCVARRI 272
+ + + +S RA E G+D C++CVARR+
Sbjct: 202 MKTHDILEDMSASPETRQRYETMQCFALSQPRAMLEEGEDLQC--------CMICVARRV 253
Query: 273 PPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ L + E F + D SG ++ +DT+
Sbjct: 254 TTGERTLPSSPESFITRHDLSGKVVNIDTN 283
>gi|431894470|gb|ELK04270.1| Nuclear receptor coactivator 3 [Pteropus alecto]
Length = 1321
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 149/284 (52%), Gaps = 53/284 (18%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEA--------LEGFLFVVNPDGYVNFCTEN 161
++ D VQ+ +VSS+ VI + LGPLLL+A L+GFLFVVN DG + F +EN
Sbjct: 90 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQASIWFQLPALDGFLFVVNRDGNIVFVSEN 149
Query: 162 IKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTAS 221
+ +++Y +++++ SVYN++H D F L S+ AWT+++ Q
Sbjct: 150 VTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVAWTNETQRQK--------- 200
Query: 222 TPNRTFNIRLLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSE 260
+ TFN R+L+ H RA E G+D
Sbjct: 201 --SHTFNCRMLMKMPHDILEDVNTSPETRQRYETMQCFALSQPRAMMEEGEDLQS----- 253
Query: 261 GGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
C++CVARRI ++ A E F + D SG ++ +DT+ +
Sbjct: 254 ---CMICVARRITTGERAFPANPESFITRHDLSGKLVNIDTNSL 294
>gi|326677205|ref|XP_691744.4| PREDICTED: hypothetical protein LOC563288 [Danio rerio]
Length = 1377
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 154/276 (55%), Gaps = 47/276 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRRE E YI+ELAEL+SA ++SL VKPDKC IL+ TV+QI+ IK++E +
Sbjct: 32 EKRRRELECRYIDELAELLSAN--MSDIASLNVKPDKCHILKSTVDQIQQIKRREQALMS 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+D VQQ ++SSS ++ E LGPLLLEAL+GF FVVN +G + F +EN+ ++ Y+++
Sbjct: 90 PNDEVQQSDISSSSHGMVEKEALGPLLLEALDGFFFVVNREGRIVFVSENVTGYLGYTQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDH F L+P S VN W+ + G+R S TFN
Sbjct: 150 ELMTSSVYSILHVGDHNEFVRILLPKSL-VNGVPWSQEQ----GRRNS-------HTFNC 197
Query: 230 RLL------ISSTH------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARR 271
RLL + S + T +A E G+D CL+C+A +
Sbjct: 198 RLLKRPPDEVDSENQEARQQYELMQCFTVSQPKALQEEGEDLQS--------CLICIACQ 249
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQT 307
I P Q+ E F K D +G II ++TS + T
Sbjct: 250 I-PRPPQIPVSTESFITKQDPTGKIISIETSALRAT 284
>gi|301078351|gb|ADK56479.1| steroid receptor coactivator [Strongylocentrotus nudus]
Length = 1991
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 154/270 (57%), Gaps = 37/270 (13%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETS--SD 114
KRR E+ ++YIEEL ELI+A+ + SL +KPDKCA+LQET++QI+ IKQQ+ + +
Sbjct: 23 KRRCEKWSSYIEELYELITAS--LSNPESLNMKPDKCALLQETLSQIKRIKQQQDAEHGE 80
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
VQ VSSSKP V + + LG +LLE L+GFLFVVN G + + TEN+ S++ Y +++++
Sbjct: 81 EVQHSHVSSSKPGVPSGDSLGSVLLETLDGFLFVVNSQGEIEYVTENVNSYLNYQQEDLI 140
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTP----NRTFN 228
G S+Y+ +H GDH F CL PS+ + W D+G +TP NR+F
Sbjct: 141 GTSIYSYVHVGDHNPFTKCLHPSTSTATSSIWPPDAG-----------TTPQCGRNRSFK 189
Query: 229 IRLLISSTH-------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARR-IPP 274
R+ + + TA L A N + +S + +EG L C+ARR +P
Sbjct: 190 CRMQVKPENDESLGAERYDTMMCTAILKPA--INKESNSSNNDAEGTVHLFCIARRALPE 247
Query: 275 TDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+S IE+FT KL R I +D S V
Sbjct: 248 EHNAISDNIEEFTTKLSRDYVIQSVDLSRV 277
>gi|26332829|dbj|BAC30132.1| unnamed protein product [Mus musculus]
Length = 282
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 123/182 (67%), Gaps = 16/182 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P ++ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNG-----GSWSGEPPRRSS----HTFNCRM 202
Query: 232 LI 233
L+
Sbjct: 203 LV 204
>gi|149042869|gb|EDL96443.1| nuclear receptor coactivator 3 [Rattus norvegicus]
Length = 1399
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 152/269 (56%), Gaps = 39/269 (14%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE---TS 112
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +S
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISS 92
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++
Sbjct: 93 DDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQED 152
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVY+++H D F + S+ +WT+++ Q + TFN R+L
Sbjct: 153 LVNTSVYSILHEQDRKDFLKHVPKSTVNGVSWTNENQRQK-----------SHTFNCRML 201
Query: 233 ISSTHLTAGLSRAGGENGQ-----------------DDSGDVSSEGGPCLMCVARRIPPT 275
+ TH + A E Q ++ D+ C++CVARR+ T
Sbjct: 202 M-KTHDILEDTNASPETRQRYETMQCFALSQPRAMLEEGEDLQC----CMICVARRV-TT 255
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
D+ + E F + D SG ++ +DT+ +
Sbjct: 256 DRPFPSSPESFITRHDLSGKVVNIDTNSL 284
>gi|326931863|ref|XP_003212043.1| PREDICTED: nuclear receptor coactivator 3-like [Meleagris
gallopavo]
Length = 1264
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 119/188 (63%), Gaps = 16/188 (8%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 33 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 90
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 91 VSNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 150
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVY ++H D F L SS AWT+D T + TFN
Sbjct: 151 QEDLVNTSVYGILHEEDRKDFLKNLPKSSVNGVAWTND-----------TPRQKSHTFNC 199
Query: 230 RLLISSTH 237
R+++ ++H
Sbjct: 200 RMMVKTSH 207
>gi|432096982|gb|ELK27481.1| Nuclear receptor coactivator 2 [Myotis davidii]
Length = 1930
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 121/182 (66%), Gaps = 16/182 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S + G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRM 202
Query: 232 LI 233
L+
Sbjct: 203 LV 204
>gi|47223551|emb|CAF98038.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1403
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 158/275 (57%), Gaps = 42/275 (15%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
NEKR REQEN YIEELAELI A+F + + + VKPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 NEKRNREQENKYIEELAELI-FANFND-IDNFNVKPDKCAILKETVKQIRQIKEQEKAAA 92
Query: 115 A----VQQGEVSSSKPTVITNEVLGPLLLE-------ALEGFLFVVNPDGYVNFCTENIK 163
A VQ+ +VSS+ +VI + LGP++LE AL+GF FVVN +G + F +EN+
Sbjct: 93 ANEEEVQKADVSSTGQSVIDKDALGPMMLELSYLSTVALDGFFFVVNMEGNIVFVSENVT 152
Query: 164 SFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTAS 221
++ Y+++E++ SVY+++H GDHA F L+P S VN W+S+ G R +
Sbjct: 153 QYLHYNQEELMNTSVYSVLHVGDHAEFIKNLLPKS-LVNGVPWSSE-----GPRRN---- 202
Query: 222 TPNRTFNIRLLISSTHLTAGLSRAGGENGQD-----------DSGDVSSEGG---PCLMC 267
+ TFN R+L+ + H E Q + + EG CL+C
Sbjct: 203 --SHTFNCRMLV-NPHSENQEEPHEHEPQQQKYETMQCFAVSEPKSIKEEGDDLQSCLIC 259
Query: 268 VARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
VARR+P ++ + E FT + D G I +DTS
Sbjct: 260 VARRVPMKERPMLPTHESFTTRQDLQGKITSLDTS 294
>gi|432866831|ref|XP_004070957.1| PREDICTED: nuclear receptor coactivator 3-like [Oryzias latipes]
Length = 1484
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 144/267 (53%), Gaps = 48/267 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
E++RREQE+ YIEELAELISA + S VKPDKCAIL+ETV QIR IK+Q SS
Sbjct: 32 ERKRREQESKYIEELAELISAN--LSDIDSFNVKPDKCAILKETVRQIRQIKEQGKSSSN 89
Query: 114 -DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN +G + F ++N+ +++Y ++E
Sbjct: 90 DDDVQKSDVSSTGQGVIDKDHLGPLLLQALDGFLFVVNREGSIVFVSDNVTQYLQYKQEE 149
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ +VYN++H D FH L SS +W G P S TF R+L
Sbjct: 150 LINTNVYNILHEDDREEFHKNLPKSSINGVSW--------GNEPVRQKS---HTFTCRML 198
Query: 233 ISSTHLTAGLSRAGG-------------------ENGQDDSGDVSSEGGPCLMCVARRIP 273
+ H + G E G+ D+ S C++CVARR+
Sbjct: 199 VKFGHAHGPMEEGPGGPRYETMQCFALTQPKAMIEEGE----DLQS----CMICVARRVT 250
Query: 274 PTDKQLSAPIEQFTMKLDRSGTIIGMD 300
++ E F + + SG +I +D
Sbjct: 251 AMER-----TESFNTRHELSGKLIQID 272
>gi|351710482|gb|EHB13401.1| Nuclear receptor coactivator 3 [Heterocephalus glaber]
Length = 1317
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 119/188 (63%), Gaps = 16/188 (8%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+S D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 90 VSSDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 149
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ +WT ++ Q + TFN
Sbjct: 150 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVSWTKETQRQK-----------SHTFNC 198
Query: 230 RLLISSTH 237
R+LI +TH
Sbjct: 199 RMLIKTTH 206
>gi|2213817|gb|AAB61575.1| nuclear receptor coactivator protein 2 [Mus musculus]
Length = 1463
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/182 (47%), Positives = 121/182 (66%), Gaps = 16/182 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F N+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVFRNVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P ++ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNG-----GSWSGEPPRRSS----HTFNCRM 202
Query: 232 LI 233
L+
Sbjct: 203 LV 204
>gi|390334225|ref|XP_781663.3| PREDICTED: uncharacterized protein LOC576243 isoform 3
[Strongylocentrotus purpuratus]
Length = 2005
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 159/286 (55%), Gaps = 41/286 (14%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETS--SD 114
KRR E+ ++YIEEL ELI+A+ + SL +KPDKCA+LQET++QI+ IKQQ+ + +
Sbjct: 21 KRRCEKRSSYIEELYELITAS--LSNPESLNMKPDKCALLQETLSQIKRIKQQQDAEHGE 78
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
VQ VSSSKP V + + LG +LLE L+GFLFVVN G + + TEN+ S++ Y +++++
Sbjct: 79 EVQHSHVSSSKPGVPSGDSLGSVLLETLDGFLFVVNSQGEIEYVTENVNSYLNYQQEDLI 138
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTP----NRTFN 228
G S+Y+ +H GDH F CL PS+ + W D+ ASTP NR+F
Sbjct: 139 GTSIYSYVHVGDHNPFTKCLHPSTSTATSSIWPPDA-----------ASTPQCGRNRSFK 187
Query: 229 IRLLISSTH-------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+ + + TA L A N + +S + +EG L C+ARR P
Sbjct: 188 CRMQVKPENDESLGAERYDTMMCTAILKPA--INKESNSSNNDAEGTVHLFCIARRALPE 245
Query: 276 DKQ--LSAPIEQFTMKLDRSGTIIGMDTS---GVSQTHTQYLNKAV 316
+ +S IE+FT KL I D S G S T + L++ +
Sbjct: 246 EHNASISDNIEEFTTKLSLEYVIQSADLSRVKGPSFTQEEMLHQTI 291
>gi|390334227|ref|XP_003723877.1| PREDICTED: uncharacterized protein LOC576243 isoform 2
[Strongylocentrotus purpuratus]
Length = 1982
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 159/286 (55%), Gaps = 41/286 (14%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETS--SD 114
KRR E+ ++YIEEL ELI+A+ + SL +KPDKCA+LQET++QI+ IKQQ+ + +
Sbjct: 21 KRRCEKRSSYIEELYELITAS--LSNPESLNMKPDKCALLQETLSQIKRIKQQQDAEHGE 78
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
VQ VSSSKP V + + LG +LLE L+GFLFVVN G + + TEN+ S++ Y +++++
Sbjct: 79 EVQHSHVSSSKPGVPSGDSLGSVLLETLDGFLFVVNSQGEIEYVTENVNSYLNYQQEDLI 138
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTP----NRTFN 228
G S+Y+ +H GDH F CL PS+ + W D+ ASTP NR+F
Sbjct: 139 GTSIYSYVHVGDHNPFTKCLHPSTSTATSSIWPPDA-----------ASTPQCGRNRSFK 187
Query: 229 IRLLISSTH-------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+ + + TA L A N + +S + +EG L C+ARR P
Sbjct: 188 CRMQVKPENDESLGAERYDTMMCTAILKPA--INKESNSSNNDAEGTVHLFCIARRALPE 245
Query: 276 DKQ--LSAPIEQFTMKLDRSGTIIGMDTS---GVSQTHTQYLNKAV 316
+ +S IE+FT KL I D S G S T + L++ +
Sbjct: 246 EHNASISDNIEEFTTKLSLEYVIQSADLSRVKGPSFTQEEMLHQTI 291
>gi|390334223|ref|XP_003723876.1| PREDICTED: uncharacterized protein LOC576243 isoform 1
[Strongylocentrotus purpuratus]
Length = 1992
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 159/286 (55%), Gaps = 41/286 (14%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETS--SD 114
KRR E+ ++YIEEL ELI+A+ + SL +KPDKCA+LQET++QI+ IKQQ+ + +
Sbjct: 21 KRRCEKRSSYIEELYELITAS--LSNPESLNMKPDKCALLQETLSQIKRIKQQQDAEHGE 78
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
VQ VSSSKP V + + LG +LLE L+GFLFVVN G + + TEN+ S++ Y +++++
Sbjct: 79 EVQHSHVSSSKPGVPSGDSLGSVLLETLDGFLFVVNSQGEIEYVTENVNSYLNYQQEDLI 138
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTP----NRTFN 228
G S+Y+ +H GDH F CL PS+ + W D+ ASTP NR+F
Sbjct: 139 GTSIYSYVHVGDHNPFTKCLHPSTSTATSSIWPPDA-----------ASTPQCGRNRSFK 187
Query: 229 IRLLISSTH-------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+ + + TA L A N + +S + +EG L C+ARR P
Sbjct: 188 CRMQVKPENDESLGAERYDTMMCTAILKPA--INKESNSSNNDAEGTVHLFCIARRALPE 245
Query: 276 DKQ--LSAPIEQFTMKLDRSGTIIGMDTS---GVSQTHTQYLNKAV 316
+ +S IE+FT KL I D S G S T + L++ +
Sbjct: 246 EHNASISDNIEEFTTKLSLEYVIQSADLSRVKGPSFTQEEMLHQTI 291
>gi|395828882|ref|XP_003787591.1| PREDICTED: nuclear receptor coactivator 1 [Otolemur garnettii]
Length = 1409
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 123/184 (66%), Gaps = 20/184 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLI 233
R+LI
Sbjct: 198 RMLI 201
>gi|74210394|dbj|BAE23388.1| unnamed protein product [Mus musculus]
Length = 585
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/272 (37%), Positives = 152/272 (55%), Gaps = 47/272 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE---TS 112
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +S
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISS 92
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++
Sbjct: 93 DDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQED 152
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVY+++H D F L S+ +WT+++ Q + TFN R+L
Sbjct: 153 LVNTSVYSILHEQDRKDFLKHLPKSTVNGVSWTNENQRQK-----------SHTFNCRML 201
Query: 233 ISSTHLTAGLS--------------------RAGGENGQDDSGDVSSEGGPCLMCVARRI 272
+ + + ++ RA E G+D C++CVARR+
Sbjct: 202 MKTHDILEDVNASPETRQRYETMQCFALSQPRAMLEEGEDLQC--------CMICVARRV 253
Query: 273 PPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
T S+P E F + D SG ++ +DT+ +
Sbjct: 254 --TAPFPSSP-ESFITRHDLSGKVVNIDTNSL 282
>gi|348538543|ref|XP_003456750.1| PREDICTED: nuclear receptor coactivator 1-like [Oreochromis
niloticus]
Length = 1558
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 156/275 (56%), Gaps = 44/275 (16%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----- 110
EKRRRE E YIEELAEL+S S ++SL+VKPDKC IL+ TV+QI+ IK++E
Sbjct: 32 EKRRRELECRYIEELAELLS--SNMGDIASLSVKPDKCHILKSTVDQIQQIKRREQEKAA 89
Query: 111 --TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
+ D VQ+ ++SSS ++ E LGP+LLEAL+GF FVVN +G + F +EN+ S++ Y
Sbjct: 90 LLSPDDEVQKSDISSSSQGLVEKEALGPMLLEALDGFFFVVNREGRIVFVSENVTSYLGY 149
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRT 226
+++E++ SVY+++H GDH F L+P S VN W + AG+R S
Sbjct: 150 TQEELMASSVYSILHVGDHNEFVRNLLPKSL-VNGVPWPQE----AGRRNS-------HA 197
Query: 227 FNIRLL------ISSTHLTAG--------LSRAGGENGQDDSGDVSSEGGPCLMCVARRI 272
FN R+L + S +L A + + Q++ D+ S CL+C+A R+
Sbjct: 198 FNCRMLKRPPDEVDSENLEARQQYEIMQCFTVSQLRTMQEEGDDLQS----CLICIACRM 253
Query: 273 PPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQT 307
P T E F K D +G II ++TS + T
Sbjct: 254 PRTQP---VSTESFITKQDPTGKIISIETSALRAT 285
>gi|118026946|ref|NP_032705.2| nuclear receptor coactivator 3 [Mus musculus]
gi|116284069|gb|AAH86482.1| Nuclear receptor coactivator 3 [Mus musculus]
Length = 1403
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 151/270 (55%), Gaps = 47/270 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE---TS 112
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +S
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISS 92
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++
Sbjct: 93 DDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQED 152
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVY+++H D F L S+ +WT+++ Q + TFN R+L
Sbjct: 153 LVNTSVYSILHEQDRKDFLKHLPKSTVNGVSWTNENQRQK-----------SHTFNCRML 201
Query: 233 ISSTHLTAGLS--------------------RAGGENGQDDSGDVSSEGGPCLMCVARRI 272
+ + + ++ RA E G+D C++CVARR+
Sbjct: 202 MKTHDILEDVNASPETRQRYETMQCFALSQPRAMLEEGEDLQC--------CMICVARRV 253
Query: 273 PPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
T S+P E F + D SG ++ +DT+
Sbjct: 254 --TAPFPSSP-ESFITRHDLSGKVVNIDTN 280
>gi|187954431|gb|AAI41178.1| Ncoa3 protein [Mus musculus]
Length = 1397
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 151/270 (55%), Gaps = 47/270 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE---TS 112
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +S
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISS 92
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++
Sbjct: 93 DDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQED 152
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVY+++H D F L S+ +WT+++ Q + TFN R+L
Sbjct: 153 LVNTSVYSILHEQDRKDFLKHLPKSTVNGVSWTNENQRQK-----------SHTFNCRML 201
Query: 233 ISSTHLTAGLS--------------------RAGGENGQDDSGDVSSEGGPCLMCVARRI 272
+ + + ++ RA E G+D C++CVARR+
Sbjct: 202 MKTHDILEDVNASPETRQRYETMQCFALSQPRAMLEEGEDLQC--------CMICVARRV 253
Query: 273 PPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
T S+P E F + D SG ++ +DT+
Sbjct: 254 --TAPFPSSP-ESFITRHDLSGKVVNIDTN 280
>gi|148674528|gb|EDL06475.1| nuclear receptor coactivator 3 [Mus musculus]
Length = 1402
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 151/270 (55%), Gaps = 47/270 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE---TS 112
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +S
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISS 92
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++
Sbjct: 93 DDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQED 152
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVY+++H D F L S+ +WT+++ Q + TFN R+L
Sbjct: 153 LVNTSVYSILHEQDRKDFLKHLPKSTVNGVSWTNENQRQK-----------SHTFNCRML 201
Query: 233 ISSTHLTAGLS--------------------RAGGENGQDDSGDVSSEGGPCLMCVARRI 272
+ + + ++ RA E G+D C++CVARR+
Sbjct: 202 MKTHDILEDVNASPETRQRYETMQCFALSQPRAMLEEGEDLQC--------CMICVARRV 253
Query: 273 PPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
T S+P E F + D SG ++ +DT+
Sbjct: 254 --TAPFPSSP-ESFITRHDLSGKVVNIDTN 280
>gi|74210736|dbj|BAE25022.1| unnamed protein product [Mus musculus]
Length = 1403
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 151/270 (55%), Gaps = 47/270 (17%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE---TS 112
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +S
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISS 92
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++
Sbjct: 93 DDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQED 152
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVY+++H D F L S+ +WT+++ Q + TFN R+L
Sbjct: 153 LVNTSVYSILHEQDRKDFLKHLPKSTVNGVSWTNENQRQK-----------SHTFNCRML 201
Query: 233 ISSTHLTAGLS--------------------RAGGENGQDDSGDVSSEGGPCLMCVARRI 272
+ + + ++ RA E G+D C++CVARR+
Sbjct: 202 MKTHDILEDVNASPETRQRYETMQCFALSQPRAMLEEGEDLQC--------CMICVARRV 253
Query: 273 PPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
T S+P E F + D SG ++ +DT+
Sbjct: 254 --TAPFPSSP-ESFITRHDLSGKVVNIDTN 280
>gi|348502599|ref|XP_003438855.1| PREDICTED: nuclear receptor coactivator 3-like [Oreochromis
niloticus]
Length = 1512
Score = 157 bits (397), Expect = 9e-36, Method: Composition-based stats.
Identities = 99/267 (37%), Positives = 149/267 (55%), Gaps = 40/267 (14%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
E++RREQE+ YIEELAELISA + S VKPDKCAIL+ETV QIR IK+Q +S
Sbjct: 32 ERKRREQESKYIEELAELISAN--LSDIDSFNVKPDKCAILKETVRQIRQIKEQGKASSN 89
Query: 114 -DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN +G + F ++N+ +++Y ++E
Sbjct: 90 DDDVQKSDVSSTGQGVIDKDHLGPLLLQALDGFLFVVNREGSIVFVSDNVTQYLQYKQEE 149
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVYN++H D FH L ++ +W S++ Q + TF R+L
Sbjct: 150 LINTSVYNILHEDDREEFHKNLPKTNINGVSWGSEAARQK-----------SHTFTCRML 198
Query: 233 ISSTHLTAGLSRAGG----ENGQ-----------DDSGDVSSEGGPCLMCVARRIPPTDK 277
+ H + G E Q ++ D+ S C++CVARR+ ++
Sbjct: 199 VKFGHAHGPMEEGPGGPRYETMQCFALTQPKAMIEEGEDLQS----CMICVARRVTAMER 254
Query: 278 QLSAPIEQFTMKLDRSGTIIGMDTSGV 304
E F + + SG +I +D + +
Sbjct: 255 T-----ESFNTRHELSGKLIQIDQNSL 276
>gi|355706642|gb|AES02705.1| nuclear receptor coactivator 3 [Mustela putorius furo]
Length = 211
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 119/188 (63%), Gaps = 16/188 (8%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 16 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 73
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+S D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 74 ISSDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 133
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ AWT+++ Q + TFN
Sbjct: 134 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVAWTNETQRQK-----------SHTFNC 182
Query: 230 RLLISSTH 237
R+L+ + H
Sbjct: 183 RMLMKTPH 190
>gi|26339660|dbj|BAC33501.1| unnamed protein product [Mus musculus]
Length = 233
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 108/153 (70%), Gaps = 6/153 (3%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAW 204
E++ KSVY+++H GDH F L+P S W
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKSMGKCQW 185
>gi|157819661|ref|NP_001101482.1| nuclear receptor coactivator 1 [Rattus norvegicus]
gi|149050859|gb|EDM03032.1| nuclear receptor coactivator 1 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1417
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 108/147 (73%), Gaps = 6/147 (4%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSS 198
E++ SVY+++H GDHA F L+P S
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKS 176
>gi|326671802|ref|XP_692938.5| PREDICTED: nuclear receptor coactivator 3 [Danio rerio]
Length = 1497
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 148/266 (55%), Gaps = 51/266 (19%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
+KRRREQE+ YIEELAELISA + S VKPDKCAIL+ETV QIR IK+Q SS
Sbjct: 31 DKRRREQESKYIEELAELISAN--LSDIDSFNVKPDKCAILKETVRQIRQIKEQGKSSCG 88
Query: 114 -DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVV+ +G + F ++N+ +++Y ++E
Sbjct: 89 DDDVQKADVSSTGQGVIDKDHLGPLLLQALDGFLFVVSREGSIVFVSDNVTQYLQYKQEE 148
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNIR 230
++ S+YN++H D H L P S+ N +W DS Q + TFN R
Sbjct: 149 LINTSIYNILHEEDREELHKNL-PKSNGPNSVSWGGDSSRQK-----------SHTFNCR 196
Query: 231 LLISSTHLTAGLS-------------------RAGGENGQDDSGDVSSEGGPCLMCVARR 271
+L+ H G +A E G+ D+ S C++CVARR
Sbjct: 197 MLVKFGHGGPGGEEGAGGPRYETMQCFALTQPKAMMEEGE----DLQS----CMICVARR 248
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTII 297
+ ++ E+F+ + + SG +I
Sbjct: 249 VTAVER-----TERFSTRHELSGKLI 269
>gi|148669420|gb|EDL01367.1| nuclear receptor coactivator 1, isoform CRA_a [Mus musculus]
Length = 1436
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 108/152 (71%), Gaps = 11/152 (7%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----- 110
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQGFIV 89
Query: 111 ----TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
T+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++
Sbjct: 90 AEKSTTDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYL 149
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCLVPSS 198
Y+++E++ SVY+++H GDHA F L+P S
Sbjct: 150 GYNQEELMNTSVYSILHVGDHAEFVKNLLPKS 181
>gi|410917001|ref|XP_003971975.1| PREDICTED: nuclear receptor coactivator 1-like [Takifugu rubripes]
Length = 1442
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 157/275 (57%), Gaps = 44/275 (16%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----- 110
EKRRRE E YIEELAEL+S S ++SL+VKPDKC IL+ TV+QI+ +K+++
Sbjct: 32 EKRRRELECRYIEELAELLS--SNMGDIASLSVKPDKCHILKSTVDQIQQMKRRKQEKAA 89
Query: 111 --TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
+ D VQ+ +VSSS ++ E LGP+LLEAL+GF FVVN +G + F +EN+ S++ Y
Sbjct: 90 LLSPDDDVQKSDVSSSSQGLVEKEALGPMLLEALDGFFFVVNREGRIVFVSENVTSYLGY 149
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRT 226
++E++ SVY+++H GDH+ F L+P S VN W + G+R S T
Sbjct: 150 PQEELMTSSVYSILHVGDHSEFVRNLLPKSL-VNGVPWPQE----PGRRNS-------HT 197
Query: 227 FNIRLL------ISSTHLTAG--------LSRAGGENGQDDSGDVSSEGGPCLMCVARRI 272
FN R+L + S + A + + ++ Q++ D+ + CL+C+A RI
Sbjct: 198 FNCRMLKRPPDEVDSENPEARQQYEIMQCFTVSQPQSMQEEGEDLQT----CLICIACRI 253
Query: 273 PPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQT 307
P + E F + D +G II ++TS + T
Sbjct: 254 P---RPQPFNTESFITRQDPTGKIISIETSALRAT 285
>gi|163915047|ref|NP_001106383.1| nuclear receptor coactivator 1 [Xenopus (Silurana) tropicalis]
gi|159155956|gb|AAI54684.1| ncoa1 protein [Xenopus (Silurana) tropicalis]
Length = 1503
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 152/277 (54%), Gaps = 55/277 (19%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQET---- 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL + ++QI+ +K+++
Sbjct: 30 EKRRREQENKYLEELAELLSAN--IGDIDSLSVKPDKCKILIKRMDQIQQLKKKKQEKAL 87
Query: 112 -SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSR 170
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ +++ Y +
Sbjct: 88 GADDDVQKSDISSSSGGVIEKESLGPLLLEALDGFFFVVNQEGRIVFVSENVTNYLGYKQ 147
Query: 171 QEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFN 228
+E++ S+Y+++H GDH F L+P S VN W+ + A +R S T N
Sbjct: 148 EELMKDSIYSILHVGDHEEFVKNLLPKSL-VNGVPWSQE----ASRRNS-------HTLN 195
Query: 229 IRLLISSTH------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVAR 270
R+LI T ++ E G+D CL+C+AR
Sbjct: 196 CRMLIRPPDDAGVENQEARQRYEVMQCFTVSQPKSFKEEGEDFQS--------CLICIAR 247
Query: 271 RIPPTDKQLSAPI---EQFTMKLDRSGTIIGMDTSGV 304
R+P API E F K D +G II +DTS +
Sbjct: 248 RLP-----RPAPITSLESFITKQDATGKIISIDTSSL 279
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAIL 46
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL
Sbjct: 30 EKRRREQENKYLEELAELLSAN--IGDIDSLSVKPDKCKIL 68
>gi|374675380|gb|AEZ56922.1| nuclear receptor coactivator-like protein, partial [Branchiostoma
belcheri]
Length = 263
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 135/238 (56%), Gaps = 34/238 (14%)
Query: 89 KPDKCAILQETVNQIRNIKQQETSS--DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFL 146
K DKCAILQE V QI+ ++ QE S+ +AVQQ +VSSS +++ + VLG LLLEAL GFL
Sbjct: 1 KADKCAILQEAVKQIKALRHQEESAAREAVQQSDVSSSGQSLLPSNVLGNLLLEALNGFL 60
Query: 147 FVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVN-AWT 205
FVVN G + F + N+++++ Y+ E++G SVYN+IH GDH +F NCL+P S W
Sbjct: 61 FVVNSQGKLEFISNNVQNYLSYTHDELMGSSVYNIIHVGDHTQFVNCLLPMSLGNGVGWG 120
Query: 206 SDSGGQAGKRPSLTASTPNRTFNIRLLIS-----------------STHLTAGLSRAGGE 248
+D+ G+ R+F R+++ T + +
Sbjct: 121 ADATGKKC-----------RSFQCRMMVKLDPEEDMEKHRTQTPQYKTMQCSAVYHPHPT 169
Query: 249 NGQDDSGDVSSEGGPCLMCVARRIP-PTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVS 305
G+ + G+ E CL+C+A ++ TD + P+EQF+ + D +G I+ +DTSG+S
Sbjct: 170 KGKTEDGNDVPEA--CLVCIASKVAESTDVEAVMPLEQFSTRQDINGKILAVDTSGLS 225
>gi|47228141|emb|CAF97770.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1370
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 151/317 (47%), Gaps = 87/317 (27%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A M L VKPDKCAIL+ETV QIR IK+Q S+
Sbjct: 7 EKRNREQENKYIEELAELIFAN--INDMDDLNVKPDKCAILKETVKQIRQIKEQGMSAMW 64
Query: 114 --------------------------------------------------DAVQQGEVSS 123
+ VQ+ +VSS
Sbjct: 65 SNGAMGGLAVHWYRQGGEWRLASNVTKIQAGGCDHSTPELVPAEAKAPVAEEVQKADVSS 124
Query: 124 SKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIH 183
+ VI + LGP++LEAL+GF FVVN +G + F +EN+ ++RY +++++ SVY+++H
Sbjct: 125 TGQGVIDKDSLGPMMLEALDGFFFVVNMEGNIVFVSENVSQYLRYQQEDLMNTSVYSVLH 184
Query: 184 HGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTAGLS 243
GDHA F L+P S VN S ++S + TFN R+LI+ G +
Sbjct: 185 VGDHAEFIKNLLPKS-LVNHRN-----------SDSSSRNSHTFNCRMLINP--FADGEA 230
Query: 244 RAGGENGQD---------------DSGDVSSEG---GPCLMCVARRIPPTDKQLSAPIEQ 285
R + QD + + EG CL+CVARR+P ++ E
Sbjct: 231 RPASDQ-QDATRQKYETMQCFAVSEPKSIKEEGEDFQSCLICVARRVPVKERPAIPTYES 289
Query: 286 FTMKLDRSGTIIGMDTS 302
FT + D G I +DTS
Sbjct: 290 FTTRQDLQGKITSLDTS 306
>gi|449748369|dbj|BAM83856.1| steroid receptor coactivator [Daphnia magna]
Length = 2871
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 138/261 (52%), Gaps = 45/261 (17%)
Query: 2 KCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRRE 61
KCLNEKRRREQEN YIEELAELIS S A+ ++SL+VKPDKCAILQETVNQ ++ RE
Sbjct: 115 KCLNEKRRREQENVYIEELAELISV-SIAD-VNSLSVKPDKCAILQETVNQI---RKIRE 169
Query: 62 QENN-------YIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
QE + + + +S S +S A A+ +
Sbjct: 170 QEEDGRSSSSSSSSSSSTSSNGSSTNSSGTSSANSGTGGAVGAVGAGGAGGAVGAVGAVG 229
Query: 115 AVQQGEVSSSKPTVITNEVLGPLL----------------------LEALEGFLFVVNPD 152
QG ++S P +T+ +GPLL LEAL+GFLFVVN +
Sbjct: 230 GGGQGNNTTS-PGGVTDGGVGPLLQQGDVSSSKPALLDTQLLGTFLLEALDGFLFVVNTE 288
Query: 153 GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQA 212
G + +EN+ F+ Y Q+++GKS+YN IHHGDHARF + L+P++ AW S+ +
Sbjct: 289 GKTEYVSENVAHFLHYQPQDLVGKSIYNFIHHGDHARFSSSLLPTA---IAWPSEMAPTS 345
Query: 213 GKRPSLTASTPNRTFNIRLLI 233
R R FN RLLI
Sbjct: 346 QNR-------IGRCFNCRLLI 359
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 55/61 (90%), Gaps = 2/61 (3%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
+N+CLNEKRRREQEN YIEELAELIS S A+ ++SL+VKPDKCAILQETVNQIR I++Q
Sbjct: 113 INKCLNEKRRREQENVYIEELAELISV-SIAD-VNSLSVKPDKCAILQETVNQIRKIREQ 170
Query: 110 E 110
E
Sbjct: 171 E 171
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 9/74 (12%)
Query: 254 SGDVSSEGGPCLMCVARRIPPTDKQLSA------PI-EQFTMKLDRSGTIIGMDTSGVSQ 306
SG ++ + CL+CVARRIP T+K +A PI EQFT KLD SG I+ +D +GVS
Sbjct: 436 SGSLAGDPQHCLVCVARRIPSTEKMAAANPTVGGPIVEQFTTKLDPSGKIVAVDVTGVSS 495
Query: 307 THTQYLNKA--VAC 318
++ YL+K V+C
Sbjct: 496 PYSSYLSKEALVSC 509
>gi|166796045|ref|NP_001107748.1| nuclear receptor coactivator 3 [Sus scrofa]
gi|164523398|gb|ABY60789.1| steroid receptor coactivator 3 [Sus scrofa]
Length = 1390
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 138/271 (50%), Gaps = 57/271 (21%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETS 112
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 33 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQG-- 88
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
QG VI + LGPLLL+AL+GFLFVVN +G + F +EN+ +++Y +++
Sbjct: 89 -----QG--------VIDKDSLGPLLLQALDGFLFVVNREGNIVFVSENVTQYLQYKQED 135
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++ SVY+++H D F L S+ WT+++ Q + TFN R+L
Sbjct: 136 LVNTSVYSILHEEDRKDFLKNLPKSTVNGVTWTNETQRQK-----------SHTFNCRML 184
Query: 233 ISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARR 271
+ H RA E G+D C++CVARR
Sbjct: 185 MKIPHDILEDMNTSPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICVARR 236
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
I ++ + E F + D SG ++ +DT+
Sbjct: 237 ITTGERAFPSNPESFITRHDLSGKVVSIDTN 267
>gi|68132068|gb|AAY85300.1| SRC3, partial [Danio rerio]
Length = 192
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 113/179 (63%), Gaps = 19/179 (10%)
Query: 60 REQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS---DAV 116
REQE+ YIEELAELISA + S VKPDKCAIL+ETV QIR IK+Q SS D V
Sbjct: 1 REQESKYIEELAELISAN--LSDIDSFNVKPDKCAILKETVRQIRQIKEQGKSSCGDDDV 58
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
Q+ +VSS+ VI + LGPLLL+AL+GFLFVV+ +G + F ++N+ +++Y ++E++
Sbjct: 59 QKADVSSTGQGVIDKDHLGPLLLQALDGFLFVVSREGSIVFVSDNVTQYLQYKQEELINT 118
Query: 177 SVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNIRLLI 233
S+YN++H D H L P S+ N +W DS Q + TFN R+L+
Sbjct: 119 SIYNILHEEDREELHKNL-PKSNGPNSVSWGGDSSRQ-----------KSHTFNCRMLV 165
>gi|392339688|ref|XP_001072953.3| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor coactivator 3
[Rattus norvegicus]
gi|392346947|ref|XP_215947.6| PREDICTED: LOW QUALITY PROTEIN: nuclear receptor coactivator 3
[Rattus norvegicus]
Length = 1399
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 99/140 (70%), Gaps = 5/140 (3%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE---TS 112
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +S
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISS 92
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++
Sbjct: 93 DDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQED 152
Query: 173 VLGKSVYNLIHHGDHARFHN 192
++ SVY+++H D F N
Sbjct: 153 LVNTSVYSILHEQDRKDFLN 172
>gi|68132066|gb|AAY85299.1| SRC1, partial [Danio rerio]
Length = 177
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 103/148 (69%), Gaps = 9/148 (6%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----- 110
EKRRRE E YI+ELAEL+SA ++SL VKPDKC IL+ TV+QI+ IK++E
Sbjct: 32 EKRRRELECRYIDELAELLSAN--MSDIASLNVKPDKCHILKSTVDQIQQIKRREQENAA 89
Query: 111 --TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
+ +D VQQ ++SSS ++ E LGPLLLEAL+GF FVVN +G + F +EN+ ++ Y
Sbjct: 90 LMSPNDEVQQSDISSSSHGMVEKEALGPLLLEALDGFFFVVNREGRIVFVSENVTGYLGY 149
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVP 196
+++E++ SVY+++H GDH F L+P
Sbjct: 150 TQEELMTSSVYSILHVGDHNEFVRILLP 177
>gi|444706941|gb|ELW48256.1| Nuclear receptor coactivator 3 [Tupaia chinensis]
Length = 1123
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 104/154 (67%), Gaps = 7/154 (4%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEA--LEGFLFVVNPDGYVNFCTENIKSFIR 167
++ D VQ+ +VSS+ VI + LGPLLL+A L+GFLFVVN DG + F +EN+ +++
Sbjct: 90 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQASALDGFLFVVNRDGNIVFVSENVTQYLQ 149
Query: 168 YSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQV 201
Y +++++ SVYN++H D F L S+ +V
Sbjct: 150 YKQEDLVNTSVYNILHEEDRKDFLKNLPKSTGKV 183
>gi|23396768|sp|O09000.2|NCOA3_MOUSE RecName: Full=Nuclear receptor coactivator 3; Short=NCoA-3;
AltName: Full=Amplified in breast cancer-1 protein
homolog; Short=AIB-1; AltName: Full=CBP-interacting
protein; Short=p/CIP; Short=pCIP; AltName:
Full=Receptor-associated coactivator 3; Short=RAC-3;
AltName: Full=Steroid receptor coactivator protein 3;
Short=SRC-3; AltName: Full=Thyroid hormone receptor
activator molecule 1; Short=ACTR; Short=TRAM-1
gi|2934906|gb|AAC05020.1| p300/CBP/Co-Integrator protein [Mus musculus]
Length = 1398
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 98/140 (70%), Gaps = 5/140 (3%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE---TS 112
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q +S
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISS 92
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++
Sbjct: 93 DDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQED 152
Query: 173 VLGKSVYNLIHHGDHARFHN 192
++ SVY+++H F N
Sbjct: 153 LVNTSVYSILHEPRRKDFLN 172
>gi|47229315|emb|CAG04067.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1615
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 118/214 (55%), Gaps = 42/214 (19%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ---ETS 112
E++RREQE+ YIEELAELISA + S VKPDKCAIL+ETV QIR IK+Q +S
Sbjct: 32 ERKRREQESKYIEELAELISAN--LSDIDSFNVKPDKCAILRETVRQIRQIKEQGKASSS 89
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLE--------------------------ALEGFL 146
D VQ+ +VSS+ VI + LGPLLL+ AL+GFL
Sbjct: 90 DDDVQKSDVSSTGQGVIDKDHLGPLLLQVSPWALEPPLGRVGIAGGDPLRLRSQALDGFL 149
Query: 147 FVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTS 206
FVVN DG + F ++N+ +++Y ++E++ SVYN++H D H L ++ +W
Sbjct: 150 FVVNRDGSIVFVSDNVTQYLQYKQEELINTSVYNILHEDDREELHKNLPKTTLNGVSW-- 207
Query: 207 DSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTA 240
GG+ TA + TF R+L+ H A
Sbjct: 208 --GGE-------TARQKSHTFTCRMLVKFGHGPA 232
>gi|322793204|gb|EFZ16861.1| hypothetical protein SINV_00923 [Solenopsis invicta]
Length = 855
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 109/192 (56%), Gaps = 31/192 (16%)
Query: 142 LEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQV 201
L+GFLF+VN +G V + T+NI FI Y++ +VLGK +YN+IHHGDH F L+P S
Sbjct: 72 LDGFLFIVNTEGCVEYVTDNITQFINYTKDDVLGKDIYNIIHHGDHNTFMPSLLPMSSL- 130
Query: 202 NAWTSDSGGQAGKRPSLTASTPNRTFNIRLLIS----------------STHLTAGLSRA 245
WTS+ Q T NRTFN R L+ S + + +
Sbjct: 131 -GWTSEPQPQ----------TRNRTFNCRFLVKPPDDKDETMEEKQQRVSKYESMQIYSL 179
Query: 246 GGENGQDDSGDVSSE---GGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
+ D SGDVSSE GPC+MCVAR+I +K +++PIEQFT++LD + I +D S
Sbjct: 180 LLPSNPDQSGDVSSESSDNGPCVMCVARKISSDEKPIASPIEQFTVRLDTTWKITAVDIS 239
Query: 303 GVSQTHTQYLNK 314
+S H++YL+K
Sbjct: 240 WLSPGHSKYLSK 251
>gi|432952284|ref|XP_004085039.1| PREDICTED: nuclear receptor coactivator 1-like, partial [Oryzias
latipes]
Length = 488
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 106/156 (67%), Gaps = 8/156 (5%)
Query: 48 ETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIK 107
+T Q L EKRRR+ E YI ELAEL+S S + +L+VKPDKC IL+ TV+QI+ ++
Sbjct: 25 DTSGQSL-EKRRRQLECRYIVELAELLS--SHMSDILTLSVKPDKCHILKTTVDQIQQLR 81
Query: 108 QQET-----SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENI 162
++E S D VQ ++SSS + E LGP+LLEAL+GF FVVN +G + F +EN+
Sbjct: 82 RREQEEALLSPDDVQNSDISSSSQGLAEKEALGPVLLEALDGFFFVVNREGRIIFVSENV 141
Query: 163 KSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSS 198
S++ YS++E++ SVY+++H G+H+ F L+P S
Sbjct: 142 TSYLGYSQEELMTSSVYSILHVGNHSEFVRNLLPDS 177
>gi|37726921|gb|AAO63004.1| transcription intermediary factor 2 [Necturus maculosus]
Length = 198
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 113/171 (66%), Gaps = 19/171 (11%)
Query: 68 EELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSS 124
EELAELI A+F + + + KPDKCAIL+ETV QIR IK+QE ++ D VQ+ +VSS+
Sbjct: 1 EELAELI-FANFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAASNEDEVQKADVSST 58
Query: 125 KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHH 184
+VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++E++ SVY+++H
Sbjct: 59 GQSVIDKDALGPMMLEALDGFFFVVNLEGIVVFVSENVTQYLRYNQEELMSTSVYSILHV 118
Query: 185 GDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNIRLLI 233
GDH F L+P S VN W++ + +R S TFN R+L+
Sbjct: 119 GDHNEFVRNLLPKS-LVNGAPWSN----EPPRRNS-------HTFNCRMLV 157
>gi|146141264|gb|AAH93478.1| Ncoa3 protein [Mus musculus]
Length = 1353
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 137/254 (53%), Gaps = 47/254 (18%)
Query: 72 ELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTV 128
ELISA + + VKPDKCAIL+ETV QIR IK+Q +S D VQ+ +VSS+ V
Sbjct: 1 ELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKTISSDDDVQKADVSSTGQGV 58
Query: 129 ITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHA 188
I + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +++++ SVY+++H D
Sbjct: 59 IDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYSILHEQDRK 118
Query: 189 RFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTAGLS----- 243
F L S+ +WT+++ Q + TFN R+L+ + + ++
Sbjct: 119 DFLKHLPKSTVNGVSWTNENQRQK-----------SHTFNCRMLMKTHDILEDVNASPET 167
Query: 244 ---------------RAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTM 288
RA E G+D C++CVARR+ T S+P E F
Sbjct: 168 RQRYETMQCFALSQPRAMLEEGEDLQC--------CMICVARRV--TAPFPSSP-ESFIT 216
Query: 289 KLDRSGTIIGMDTS 302
+ D SG ++ +DT+
Sbjct: 217 RHDLSGKVVNIDTN 230
>gi|355706624|gb|AES02699.1| nuclear receptor coactivator 1 [Mustela putorius furo]
Length = 1304
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 116/220 (52%), Gaps = 46/220 (20%)
Query: 107 KQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
+++ T+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++
Sbjct: 1 QEKSTTDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYL 60
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPN 224
Y+++E++ SVY+++H GDHA F L+P S VN W + A +R S
Sbjct: 61 GYNQEELMNTSVYSILHVGDHAEFVKNLLPKSL-VNGVPWPQE----ATRRNS------- 108
Query: 225 RTFNIRLLISSTHLTAGLSRAGGENG--------------------QDDSGDVSSEGGPC 264
TFN R+LI G EN Q+D D S C
Sbjct: 109 HTFNCRMLIHPP------DEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----C 158
Query: 265 LMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
L+C+ARR+ P ++ +E F K D +G II +DTS +
Sbjct: 159 LICIARRL-PRPPAITG-VESFMTKQDTTGKIISIDTSSL 196
>gi|33413792|gb|AAN37601.1| SRC-2 [Ambystoma mexicanum]
Length = 154
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 92/143 (64%), Gaps = 13/143 (9%)
Query: 94 AILQETVNQIRNIKQQETSS---DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN 150
AIL+ETV QIR IK+QE ++ D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN
Sbjct: 1 AILKETVKQIRQIKEQEKAAANEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVN 60
Query: 151 PDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGG 210
+G V F +EN+ ++RY+++E++ SVY+++H GDH F L+P S VN GG
Sbjct: 61 LEGNVVFVSENVTQYLRYNQEELMNTSVYSILHVGDHNEFVRNLLPKS-LVN------GG 113
Query: 211 QAGKRPSLTASTPNRTFNIRLLI 233
P S TFN R+L+
Sbjct: 114 PWSNEPPRRNS---HTFNCRMLV 133
>gi|148682372|gb|EDL14319.1| nuclear receptor coactivator 2 [Mus musculus]
Length = 1456
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 109/206 (52%), Gaps = 31/206 (15%)
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++E+
Sbjct: 38 DEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQEEL 97
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLI 233
+ KSVY+++H GDH F L+P S VN G +G+ P ++ TFN R+L+
Sbjct: 98 MNKSVYSILHVGDHTEFVKNLLPKS-MVNG-----GSWSGEPPRRSS----HTFNCRMLV 147
Query: 234 SSTHLTAGLSRAGGENGQ-----------------DDSGDVSSEGGPCLMCVARRIPPTD 276
+ E Q ++ D+ S CL+CVARR+P +
Sbjct: 148 KPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQS----CLICVARRVPMKE 203
Query: 277 KQLSAPIEQFTMKLDRSGTIIGMDTS 302
+ E FT + D G I +DTS
Sbjct: 204 RPTLPSSESFTTRQDLQGKITSLDTS 229
>gi|355784414|gb|EHH65265.1| Nuclear receptor coactivator 3 [Macaca fascicularis]
Length = 1469
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 74/246 (30%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 31 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 88
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEA--------LEG----------------- 144
++ D VQ+ +VSS+ VI + LGPLLL+A + G
Sbjct: 89 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQASIKILTVHVGGWKSRIKVSAGLDSPFLV 148
Query: 145 ------------FLFVVNP------------DGY---------VNFCTENIKSFIRYSRQ 171
FL +P DG+ + F +EN+ +++Y ++
Sbjct: 149 TVFSHGLFSACTFLVSFSPLIGYRSYWIRALDGFLFVVNRDGNIVFVSENVTQYLQYKQE 208
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
+++ SVYN++H D F L S+ +WT+++ Q + TFN R+
Sbjct: 209 DLVNTSVYNILHEEDRKDFLKNLPKSTVNGVSWTNETQRQK-----------SHTFNCRM 257
Query: 232 LISSTH 237
L+ + H
Sbjct: 258 LMKTPH 263
>gi|355563055|gb|EHH19617.1| Nuclear receptor coactivator 3 [Macaca mulatta]
Length = 1484
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 118/246 (47%), Gaps = 74/246 (30%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 31 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 88
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEA--------LEG----------------- 144
++ D VQ+ +VSS+ VI + LGPLLL+A + G
Sbjct: 89 ISNDDDVQKADVSSTGQGVIDKDSLGPLLLQASIKILTVHVGGWKSRIKVSAGLDSPFLV 148
Query: 145 ------------FLFVVNP------------DGY---------VNFCTENIKSFIRYSRQ 171
FL +P DG+ + F +EN+ +++Y ++
Sbjct: 149 TVFSHGLFSACTFLVSFSPLIGYRSYWIRALDGFLFVVNRDGNIVFVSENVTQYLQYKQE 208
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
+++ SVYN++H D F L S+ +WT+++ Q + TFN R+
Sbjct: 209 DLVNTSVYNILHEEDRKDFLKNLPKSTVNGVSWTNETQRQK-----------SHTFNCRM 257
Query: 232 LISSTH 237
L+ + H
Sbjct: 258 LMKTPH 263
>gi|417413768|gb|JAA53196.1| Putative nuclear receptor coactivator 3, partial [Desmodus
rotundus]
Length = 1324
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 107/213 (50%), Gaps = 40/213 (18%)
Query: 111 TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSR 170
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y +
Sbjct: 5 SNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQ 64
Query: 171 QEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIR 230
++++ SVYN++H D F L S+ AWT+++ Q + TFN R
Sbjct: 65 EDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVAWTNETQRQK-----------SHTFNCR 113
Query: 231 LLISSTH---------------------LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVA 269
+L+ + H RA E G+D C++CVA
Sbjct: 114 MLMKTPHDILEDMNTSPEMRQRYETMQCFALSQPRAMMEEGEDLQS--------CMICVA 165
Query: 270 RRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
RRI ++ + E F + D SG ++ +DT+
Sbjct: 166 RRITTGERAFPSNPESFITRHDLSGKLVNIDTN 198
>gi|118487456|gb|ABE99837.2| p160 coactivator FISC [Aedes aegypti]
Length = 1488
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 148/347 (42%), Gaps = 75/347 (21%)
Query: 23 LISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAES 82
++ A S + + KPD Q +N+C NEKRRRE EN YIE+L E +
Sbjct: 90 VVPAVSVPAANKKIRRKPDTKP--QSQINKCNNEKRRRELENEYIEQLGEFLQI----NK 143
Query: 83 MSSLAVKPDKCAILQETVNQIRNIKQQ------------ETSSD--------AVQQGEVS 122
A KPDK AIL E V R + +Q + S D VQQGEVS
Sbjct: 144 RDMTACKPDKAAILSEVVKTFRRLLEQGNRDLTGSNRCSKCSPDCSDSCKLHPVQQGEVS 203
Query: 123 SSKPTVITNEVLG-----PLLLEALEGF-------LFVVNPDGYVNFCTENIKSFIRYSR 170
S++P + V G EA++ + L +N +G + T+N+ + Y+R
Sbjct: 204 STEPPLPEPSVNGHSPEKSAYFEAVKYYISNVGWVLLEINSEGVIECATDNVLDVLHYTR 263
Query: 171 QEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIR 230
E+ G+S+Y+ +H GDH++ L +S ++N W + Q KR T IR
Sbjct: 264 TELHGQSIYSYLHTGDHSKLSPILNKNSFELN-WDQNEFLQPPKRTIRT--------KIR 314
Query: 231 LLISS---THLTAGLSRAGGENGQD---------DSGDVSSEGGPCLMCVARRIPPTDKQ 278
L+ + + T + E +D D D S CL+ + P D+
Sbjct: 315 WLLKTPENANDTIEQKQQRQEKYKDLLIISAPVKDDTDAESSSVLCLITL-----PEDEH 369
Query: 279 LSAPI-----------EQFTMKLDRSGTIIGMDTSGVSQTHTQYLNK 314
P EQ T+KLD +G +I D + + + T YL K
Sbjct: 370 HQGPAIESHTMPQTLDEQLTLKLDMTGAVIDFDAATLRKQFTDYLTK 416
>gi|170055311|ref|XP_001863526.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167875349|gb|EDS38732.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1340
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 104/219 (47%), Gaps = 41/219 (18%)
Query: 23 LISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAES 82
++ A S + + KPD Q +N+C NEKRRRE EN YIE+L E +
Sbjct: 127 VVPAVSVPAASKKIRRKPDTKP--QSQINKCNNEKRRRELENEYIEQLGEFLQI----NK 180
Query: 83 MSSLAVKPDKCAILQETVNQIRNIKQQ--------------ETSSD--------AVQQGE 120
A KPDK AIL E V R + +Q + S D VQQGE
Sbjct: 181 RDMTACKPDKAAILSEVVRTFRRLLEQGNRDLTTATGNRCSKCSPDCSDSCKLHPVQQGE 240
Query: 121 VSSSKPTVITNEVLG-----PLLLEALEGF-------LFVVNPDGYVNFCTENIKSFIRY 168
VSS++P + V G EA++ + L +N DG + TEN++ + Y
Sbjct: 241 VSSTEPPLPEPSVNGHSPEKSAYFEAVQYYISNIGWALLEINSDGVIECATENVRDVLHY 300
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD 207
SR E+ G+S+Y+ +H GDH++ L +S ++N W D
Sbjct: 301 SRNELHGQSIYSYLHTGDHSKLSPILNKNSFELN-WDQD 338
>gi|158298530|ref|XP_001689140.1| AGAP009664-PA [Anopheles gambiae str. PEST]
gi|157013927|gb|EDO63413.1| AGAP009664-PA [Anopheles gambiae str. PEST]
Length = 1601
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 39/197 (19%)
Query: 39 KPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQE 98
KPD A Q +N+C NEKRRRE EN YIE+L E + M+ A KPDK AIL E
Sbjct: 23 KPD--AKPQSQINKCNNEKRRRELENEYIEQLGEFLQ---IKRDMT--ACKPDKAAILSE 75
Query: 99 TVNQIRNIKQQ-----------ETSSD--------AVQQGEVSSSKPTVITNEVLG---- 135
V R++ +Q + S D VQQGEVSS++P + V G
Sbjct: 76 VVRTFRHMLEQGNPNLTGSRCSKCSPDCSASCKLHPVQQGEVSSTEPPLPEPSVNGHSPE 135
Query: 136 -PLLLEALEGF-------LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDH 187
EA++ + L +N +G + TEN++ + YSR E+ G+S+Y+ +H GDH
Sbjct: 136 KSAYFEAVQHYISNVGWALLEINSEGVIECATENVRDVLHYSRTELHGQSIYSYLHTGDH 195
Query: 188 ARFHNCLVPSSHQVNAW 204
++ L +S ++N W
Sbjct: 196 SKLSPILNKNSFELN-W 211
>gi|312381574|gb|EFR27291.1| hypothetical protein AND_06107 [Anopheles darlingi]
Length = 1390
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 98/191 (51%), Gaps = 37/191 (19%)
Query: 45 ILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR 104
+ Q +N+C NEKRRRE EN YIE+L E + M+S KPDK AIL E V R
Sbjct: 131 VPQSQINKCNNEKRRRELENEYIEQLGEFLQ---IKRDMTS--CKPDKAAILSEVVRTFR 185
Query: 105 NIKQQ-----------ETSSD--------AVQQGEVSSSKPTVITNEVLG-----PLLLE 140
++ +Q + S D VQQGEVSS++P + V G E
Sbjct: 186 HMLEQGNPNLTGSRCSKCSPDCSASCKLHPVQQGEVSSTEPPLPEPSVNGHSPEKSAYFE 245
Query: 141 ALEGF-------LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNC 193
A++ + L +N +G + TEN++ + YSR E+ G+S+Y+ +H GDH++
Sbjct: 246 AVQHYISNVGWALLEINSEGVIECATENVRDVLHYSRTELHGQSIYSYLHTGDHSKLSPI 305
Query: 194 LVPSSHQVNAW 204
L +S ++N W
Sbjct: 306 LNKNSFELN-W 315
>gi|444517835|gb|ELV11818.1| Nuclear receptor coactivator 2 [Tupaia chinensis]
Length = 1322
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 76/120 (63%), Gaps = 10/120 (8%)
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++E+
Sbjct: 66 DEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEEL 125
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLI 233
+ KSVY+++H GDH F L+P S + G +G+ P + TFN R+L+
Sbjct: 126 MNKSVYSILHVGDHNEFVKNLLPKS------IVNGGSWSGEPPRRNS----HTFNCRMLV 175
>gi|157128629|ref|XP_001655163.1| hypothetical protein AaeL_AAEL002382 [Aedes aegypti]
gi|108882227|gb|EAT46452.1| AAEL002382-PA [Aedes aegypti]
Length = 1777
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 150/363 (41%), Gaps = 88/363 (24%)
Query: 23 LISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAES 82
++ A S + + KPD Q +N+C NEKRRRE EN YIE+L E +
Sbjct: 119 VVPAVSVPAANKKIRRKPDTKP--QSQINKCNNEKRRRELENEYIEQLGEFLQI----NK 172
Query: 83 MSSLAVKPDKCAILQETVNQIRNIKQQ------------ETSSD--------AVQQGEVS 122
A KPDK AIL E V R + +Q + S D VQQGEVS
Sbjct: 173 RDMTACKPDKAAILSEVVKTFRRLLEQGNRDLTGSNRCSKCSPDCSDSCKLHPVQQGEVS 232
Query: 123 SSKPTVITNEVLG-----PLLLEALEGF-------LFVVNPDGYVNFCTENIKSFIRYSR 170
S++P + V G EA++ + L +N +G + T+N+ + Y+R
Sbjct: 233 STEPPLPEPSVNGHSPEKSAYFEAVKYYISNVGWVLLEINSEGVIECATDNVLDVLHYTR 292
Query: 171 QEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTAS--------- 221
E+ G+S+Y+ +H GDH++ L +S ++N W Q R S+
Sbjct: 293 TELHGQSIYSYLHTGDHSKLSPILNKNSFELN-WD-----QNEVRISVVLLDLGLTLPLH 346
Query: 222 -----TPNRTF--NIRLLIS---STHLTAGLSRAGGENGQD---------DSGDVSSEGG 262
P RT IR L+ S + T + E +D D D S
Sbjct: 347 LQFLQPPKRTIRTKIRWLLKTPESANDTIEQKQQRQEKYKDLLIISAPVKDDTDAESSSV 406
Query: 263 PCLMCVARRIPPTDKQLSAPI-----------EQFTMKLDRSGTIIGMDTSGVSQTHTQY 311
CL+ + P D+ P EQ T+KLD +G +I D + + + T Y
Sbjct: 407 LCLITL-----PEDEHHQGPAIESHTMPQTLDEQLTLKLDMTGAVIDFDAATLRKQFTDY 461
Query: 312 LNK 314
L K
Sbjct: 462 LTK 464
>gi|149060921|gb|EDM11531.1| nuclear receptor coactivator 2 [Rattus norvegicus]
Length = 1348
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 41/188 (21%)
Query: 137 LLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVP 196
++LEAL+GF FVVN +G V F +EN+ ++RY+++E++ KSVY+++H GDH F L+P
Sbjct: 1 MMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLLP 60
Query: 197 SSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTAGLSRAGGENGQDD- 253
S VN +WT G+ +R S TFN R+L+ + E G D+
Sbjct: 61 KS-MVNGGSWT----GEPPRRNS-------HTFNCRMLVKPLPDSE-------EEGHDNQ 101
Query: 254 ----------------SGDVSSEG---GPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSG 294
+ EG CL+CVARR+P ++ E FT + D G
Sbjct: 102 EAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERPALPSSESFTTRQDLQG 161
Query: 295 TIIGMDTS 302
I +DTS
Sbjct: 162 KITSLDTS 169
>gi|47222431|emb|CAG12951.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1200
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 99/178 (55%), Gaps = 32/178 (17%)
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
S D VQ+ ++SSS ++ E LGP+LLEAL+GF FVVN +G + F +EN+ S++ Y ++
Sbjct: 12 SDDDVQKSDISSSSQGLVEKEALGPMLLEALDGFFFVVNREGRIVFVSENVTSYLGYPQE 71
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDH+ F L+P S VN W + G+R S TFN
Sbjct: 72 ELMTSSVYSILHVGDHSEFVRNLLPKS-LVNGVPWPQE----PGRRNS-------HTFNC 119
Query: 230 RLL------ISSTHLTAG--------LSRAGGENGQDDSGDVSSEGGPCLMCVARRIP 273
R+L + S + A + + ++ Q++ D+ + CL+C+A RIP
Sbjct: 120 RMLKRPPDEVDSENPEARQQYEIMQCFTVSQPQSMQEEGEDLQT----CLICIACRIP 173
>gi|194765489|ref|XP_001964859.1| GF22712 [Drosophila ananassae]
gi|190617469|gb|EDV32993.1| GF22712 [Drosophila ananassae]
Length = 2037
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 108/242 (44%), Gaps = 71/242 (29%)
Query: 17 IEELAELISAASFAESMSSLAV--KPD-KCAILQETVNQCLNEKRRREQENNYIEELAEL 73
+ +A ISA+S + + + KPD K + Q +N+C NEKRRRE EN YIE+L+E+
Sbjct: 182 MNAVASPISASSANPATAGRKIRRKPDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEI 241
Query: 74 ISAASFAESMSSLAVKPDKCAILQETVNQIRNI--------------------------- 106
++ + S+ KPDK AIL + V R I
Sbjct: 242 LTLNKRGDMTST---KPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNSTTTTNNNNT 298
Query: 107 -------------KQQETSS------------DAVQQGEVSSSKPTVITNEVL-GPL--- 137
K Q TS+ VQQGEVSS++P +L G +
Sbjct: 299 NSNNNNNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPHPEPSLLLGQVPEI 358
Query: 138 --LLEALEGF-------LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHA 188
EALE + L VN +G + CT+NI+ I Y +QE+ + +Y ++HGDHA
Sbjct: 359 SAYFEALEHYISGVGWVLLQVNANGIIESCTQNIRELIGYEKQELYHQPLYMYLYHGDHA 418
Query: 189 RF 190
+
Sbjct: 419 KL 420
>gi|195473249|ref|XP_002088908.1| GE18829 [Drosophila yakuba]
gi|194175009|gb|EDW88620.1| GE18829 [Drosophila yakuba]
Length = 2039
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 67/238 (28%)
Query: 17 IEELAELISA--ASFAESMSSLAVKPD-KCAILQETVNQCLNEKRRREQENNYIEELAEL 73
+ +A ISA A+ A S + K D K + Q +N+C NEKRRRE EN YIE+L+E+
Sbjct: 203 MNAVASPISANSANSATSGRKIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEI 262
Query: 74 ISAASFAESMSSLAVKPDKCAILQETVNQIRNI--------------------------- 106
++ + S+ KPDK AIL + V R I
Sbjct: 263 LTLNKRGDMTST---KPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNSTTTTNNNT 319
Query: 107 ---------KQQETSS------------DAVQQGEVSSSKPTVITNEVL-GPL-----LL 139
K Q TS+ VQQGEVSS++P + +L G +
Sbjct: 320 NSNNNNNTSKPQATSTRCTRCATDNCSIHPVQQGEVSSTEPPLAEPSLLLGQVPEISAYF 379
Query: 140 EALEGF-------LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
EALE + L VN +G + CT+NI+ I Y +QE+ + +Y ++ GDHA+
Sbjct: 380 EALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAKL 437
>gi|195577787|ref|XP_002078750.1| GD23591 [Drosophila simulans]
gi|194190759|gb|EDX04335.1| GD23591 [Drosophila simulans]
Length = 2022
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 116/261 (44%), Gaps = 67/261 (25%)
Query: 17 IEELAELISA--ASFAESMSSLAVKPD-KCAILQETVNQCLNEKRRREQENNYIEELAEL 73
+ +A ISA A+ A S + K D K + Q +N+C NEKRRRE EN YIE+L+E+
Sbjct: 207 MNAVASPISANSANSATSGRKIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEI 266
Query: 74 ISAASFAESMSSLAVKPDKCAILQETVNQIRNI--------------------------- 106
++ + S+ KPDK AIL + V R I
Sbjct: 267 LTLNKRGDMTST---KPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNSTTTTNNNT 323
Query: 107 ---------KQQETSS------------DAVQQGEVSSSKPTVITNEVLGPLL------L 139
K Q TS+ VQQGEVSS++P + +L +
Sbjct: 324 NSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPEPSLLLGQVPEISAYF 383
Query: 140 EALEGF-------LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHN 192
EALE + L VN +G + CT+NI+ I Y +QE+ + +Y ++ GDHA+
Sbjct: 384 EALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAKLEP 443
Query: 193 CLVPSSHQVNAWTSDSGGQAG 213
+ + N TS+SG +G
Sbjct: 444 IINTMYNNPNGGTSNSGNNSG 464
>gi|195116094|ref|XP_002002591.1| GI17466 [Drosophila mojavensis]
gi|193913166|gb|EDW12033.1| GI17466 [Drosophila mojavensis]
Length = 2141
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 94/224 (41%), Gaps = 78/224 (34%)
Query: 42 KCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV- 100
K + Q +N+C NEKRRRE ENNYIE+L+E + + S+ KPDK AIL + V
Sbjct: 231 KINLPQSQINKCNNEKRRREMENNYIEQLSEFLQLNKRGDMTST---KPDKAAILNQVVR 287
Query: 101 --------NQIRNI-----------------------------------------KQQET 111
Q R+I K Q T
Sbjct: 288 TYRDICDKGQSRDISSTSTNNNNNNSTTTTNNNNNNNNNNNNNTNNNNNNNNNSHKPQAT 347
Query: 112 SS------------DAVQQGEVSSSKPTVITNEVLGPLL------LEALEGF-------L 146
S+ VQQGEVSS++P + +L + EALE + L
Sbjct: 348 STRCPRCATDNCSIHPVQQGEVSSTEPPLPEPSLLNGQVPEISAYFEALEHYISSVGWVL 407
Query: 147 FVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
VN +G + CT+NI+ I Y +QE+ + +Y ++ GDHA+
Sbjct: 408 LQVNANGIIESCTQNIRELIGYEKQELFHQPLYRYLYAGDHAKL 451
>gi|380023286|ref|XP_003695455.1| PREDICTED: nuclear receptor coactivator 2-like [Apis florea]
Length = 208
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 21/114 (18%)
Query: 224 NRTFNIRLLIS----------------STHLTAGLSRAGGENGQD--DSGDVSSE---GG 262
NRTFN R L+ S + + + A N D +SGDVSSE G
Sbjct: 20 NRTFNCRFLVKPPDDKEETMEEKQQRVSKYESMQICSALLPNNSDRLESGDVSSESSDNG 79
Query: 263 PCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGVSQTHTQYLNKAV 316
PC+MCVARRIPP +K + PIEQFT+KLD +G II +D +S +++YL+K +
Sbjct: 80 PCVMCVARRIPPNEKPIGTPIEQFTVKLDTTGKIIAVDVIWLSSPYSEYLSKEL 133
>gi|345310655|ref|XP_003428999.1| PREDICTED: nuclear receptor coactivator 1-like, partial
[Ornithorhynchus anatinus]
Length = 1010
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 41/165 (24%)
Query: 140 EALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+AL+GF FVVN +G + F +EN+ ++ Y ++E++ SVY+++H GDHA L+P S
Sbjct: 4 QALDGFFFVVNREGRIVFVSENVTGYLGYKQEELMNTSVYSVLHVGDHAELIKNLLPKSL 63
Query: 200 QVN-AWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTAGLSRAGGENGQDDSGDVS 258
N W ++ ++G TFN R+L+ H
Sbjct: 64 VNNVPWPQEAPRRSG-----------HTFNCRMLLRDFHS-------------------- 92
Query: 259 SEGGPCLMCVARRIPPTDKQLSAP-IEQFTMKLDRSGTIIGMDTS 302
CL+C+ARR P + + P E F K D +G II +DTS
Sbjct: 93 -----CLICIARRFP---RPPAVPGSESFMTKQDTTGKIISIDTS 129
>gi|350407684|ref|XP_003488160.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Bombus impatiens]
Length = 663
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V +RN++
Sbjct: 40 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMRNLRGTG 93
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVVN G + + ++++ + Y
Sbjct: 94 NTSSDG-------AYKPSFLTDQELKHLILEAADGFLFVVNCTSGMIIYVSDSVAPVLNY 146
Query: 169 SRQEVLGKSVYNLIHHGD 186
++ + G S+Y+ +H D
Sbjct: 147 TQNDWYGTSLYSQVHPDD 164
>gi|340717548|ref|XP_003397243.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Bombus terrestris]
Length = 663
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V +RN++
Sbjct: 40 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMRNLRGTG 93
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVVN G + + ++++ + Y
Sbjct: 94 NTSSDG-------AYKPSFLTDQELKHLILEAADGFLFVVNCTSGMIIYVSDSVAPVLNY 146
Query: 169 SRQEVLGKSVYNLIHHGD 186
++ + G S+Y+ +H D
Sbjct: 147 TQNDWYGTSLYSQVHPDD 164
>gi|194858905|ref|XP_001969281.1| GG25335 [Drosophila erecta]
gi|190661148|gb|EDV58340.1| GG25335 [Drosophila erecta]
Length = 2042
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 100/228 (43%), Gaps = 64/228 (28%)
Query: 42 KCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVN 101
K + Q +N+C NEKRRRE EN YIE+L+E+++ + S+ KPDK AIL + V
Sbjct: 240 KVNLPQSQINKCNNEKRRREAENGYIEQLSEILTLNKRGDMTST---KPDKAAILNQVVR 296
Query: 102 QIRNI------------------------------------KQQETSS------------ 113
R I K Q TS+
Sbjct: 297 TYREICDKGQNRDISSTSTNNNNSTTTTNNNTNSNNNNNTSKPQATSTRCSRCATDNCSI 356
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLL------LEALEGF-------LFVVNPDGYVNFCTE 160
VQQGEVSS++P + +L + EALE + L VN +G + CT+
Sbjct: 357 HPVQQGEVSSTEPPLPEPSLLLGQVPEISAYFEALEHYISGVGWVLLQVNANGIIESCTQ 416
Query: 161 NIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDS 208
NI+ I Y +QE+ + +Y ++ GDHA+ + + N +S+S
Sbjct: 417 NIRDLIGYEKQELYHQPLYMYLYSGDHAKLEPIINTMYNNPNGGSSNS 464
>gi|348571872|ref|XP_003471719.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Cavia porcellus]
Length = 854
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 82/146 (56%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ F+ L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEFYKIL 170
>gi|386769358|ref|NP_001245949.1| taiman, isoform G [Drosophila melanogaster]
gi|383291402|gb|AFH03623.1| taiman, isoform G [Drosophila melanogaster]
Length = 2047
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 67/238 (28%)
Query: 17 IEELAELISA--ASFAESMSSLAVKPD-KCAILQETVNQCLNEKRRREQENNYIEELAEL 73
+ +A ISA A+ A S + K D K + Q +N+C NEKRRRE EN YIE+L+E+
Sbjct: 202 MNAVASPISANSANSATSGRKIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEI 261
Query: 74 ISAASFAESMSSLAVKPDKCAILQETVNQIRNI--------------------------- 106
++ + S+ KPDK AIL + V R I
Sbjct: 262 LTLNKRGDMTST---KPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNSTTTTNNNT 318
Query: 107 ---------KQQETSS------------DAVQQGEVSSSKPTVITNEVLGPLL------L 139
K Q TS+ VQQGEVSS++P + +L +
Sbjct: 319 NSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPEPSLLLGQVPEISAYF 378
Query: 140 EALEGF-------LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
EALE + L VN +G + CT+NI+ I Y +QE+ + +Y ++ GDHA+
Sbjct: 379 EALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAKL 436
>gi|10445219|gb|AAG16637.1| ecdysone receptor co-activator Taiman [Drosophila melanogaster]
Length = 2035
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 67/238 (28%)
Query: 17 IEELAELISA--ASFAESMSSLAVKPD-KCAILQETVNQCLNEKRRREQENNYIEELAEL 73
+ +A ISA A+ A S + K D K + Q +N+C NEKRRRE EN YIE+L+E+
Sbjct: 202 MNAVASPISANSANSATSGRKIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEI 261
Query: 74 ISAASFAESMSSLAVKPDKCAILQETVNQIRNI--------------------------- 106
++ + S+ KPDK AIL + V R I
Sbjct: 262 LTLNKRGDMTST---KPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNSTTTTNNNT 318
Query: 107 ---------KQQETSS------------DAVQQGEVSSSKPTVITNEVLGPLL------L 139
K Q TS+ VQQGEVSS++P + +L +
Sbjct: 319 NSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPEPSLLLGQVPEISAYF 378
Query: 140 EALEGF-------LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
EALE + L VN +G + CT+NI+ I Y +QE+ + +Y ++ GDHA+
Sbjct: 379 EALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAKL 436
>gi|320544760|ref|NP_001188746.1| taiman, isoform C [Drosophila melanogaster]
gi|320544762|ref|NP_523521.3| taiman, isoform D [Drosophila melanogaster]
gi|318068374|gb|ADV36996.1| taiman, isoform C [Drosophila melanogaster]
gi|318068375|gb|AAF52754.3| taiman, isoform D [Drosophila melanogaster]
Length = 2026
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 67/238 (28%)
Query: 17 IEELAELISA--ASFAESMSSLAVKPD-KCAILQETVNQCLNEKRRREQENNYIEELAEL 73
+ +A ISA A+ A S + K D K + Q +N+C NEKRRRE EN YIE+L+E+
Sbjct: 202 MNAVASPISANSANSATSGRKIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEI 261
Query: 74 ISAASFAESMSSLAVKPDKCAILQETVNQIRNI--------------------------- 106
++ + S+ KPDK AIL + V R I
Sbjct: 262 LTLNKRGDMTST---KPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNSTTTTNNNT 318
Query: 107 ---------KQQETSS------------DAVQQGEVSSSKPTVITNEVLGPLL------L 139
K Q TS+ VQQGEVSS++P + +L +
Sbjct: 319 NSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPEPSLLLGQVPEISAYF 378
Query: 140 EALEGF-------LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
EALE + L VN +G + CT+NI+ I Y +QE+ + +Y ++ GDHA+
Sbjct: 379 EALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAKL 436
>gi|320544764|ref|NP_001188747.1| taiman, isoform E [Drosophila melanogaster]
gi|318068376|gb|ADV36997.1| taiman, isoform E [Drosophila melanogaster]
Length = 2014
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 67/238 (28%)
Query: 17 IEELAELISA--ASFAESMSSLAVKPD-KCAILQETVNQCLNEKRRREQENNYIEELAEL 73
+ +A ISA A+ A S + K D K + Q +N+C NEKRRRE EN YIE+L+E+
Sbjct: 202 MNAVASPISANSANSATSGRKIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEI 261
Query: 74 ISAASFAESMSSLAVKPDKCAILQETVNQIRNI--------------------------- 106
++ + S+ KPDK AIL + V R I
Sbjct: 262 LTLNKRGDMTST---KPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNSTTTTNNNT 318
Query: 107 ---------KQQETSS------------DAVQQGEVSSSKPTVITNEVLGPLL------L 139
K Q TS+ VQQGEVSS++P + +L +
Sbjct: 319 NSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPEPSLLLGQVPEISAYF 378
Query: 140 EALEGF-------LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
EALE + L VN +G + CT+NI+ I Y +QE+ + +Y ++ GDHA+
Sbjct: 379 EALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAKL 436
>gi|320544766|ref|NP_001188748.1| taiman, isoform F [Drosophila melanogaster]
gi|442626967|ref|NP_001260280.1| taiman, isoform H [Drosophila melanogaster]
gi|318068377|gb|ADV36998.1| taiman, isoform F [Drosophila melanogaster]
gi|440213593|gb|AGB92816.1| taiman, isoform H [Drosophila melanogaster]
Length = 1918
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 67/238 (28%)
Query: 17 IEELAELISA--ASFAESMSSLAVKPD-KCAILQETVNQCLNEKRRREQENNYIEELAEL 73
+ +A ISA A+ A S + K D K + Q +N+C NEKRRRE EN YIE+L+E+
Sbjct: 202 MNAVASPISANSANSATSGRKIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEI 261
Query: 74 ISAASFAESMSSLAVKPDKCAILQETVNQIRNI--------------------------- 106
++ + S+ KPDK AIL + V R I
Sbjct: 262 LTLNKRGDMTST---KPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNSTTTTNNNT 318
Query: 107 ---------KQQETSS------------DAVQQGEVSSSKPTVITNEVLGPLL------L 139
K Q TS+ VQQGEVSS++P + +L +
Sbjct: 319 NSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPEPSLLLGQVPEISAYF 378
Query: 140 EALEGF-------LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
EALE + L VN +G + CT+NI+ I Y +QE+ + +Y ++ GDHA+
Sbjct: 379 EALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAKL 436
>gi|294862328|gb|ACQ89824.2| MIP05945p [Drosophila melanogaster]
Length = 1281
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 67/238 (28%)
Query: 17 IEELAELISA--ASFAESMSSLAVKPD-KCAILQETVNQCLNEKRRREQENNYIEELAEL 73
+ +A ISA A+ A S + K D K + Q +N+C NEKRRRE EN YIE+L+E+
Sbjct: 202 MNAVASPISANSANSATSGRKIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEI 261
Query: 74 ISAASFAESMSSLAVKPDKCAILQETVNQIRNI--------------------------- 106
++ + S+ KPDK AIL + V R I
Sbjct: 262 LTLNKRGDMTST---KPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNSTTTTNNNT 318
Query: 107 ---------KQQETSS------------DAVQQGEVSSSKPTVITNEVLGPLL------L 139
K Q TS+ VQQGEVSS++P + +L +
Sbjct: 319 NSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPPLPEPSLLLGQVPEISAYF 378
Query: 140 EALEGF-------LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
EALE + L VN +G + CT+NI+ I Y +QE+ + +Y ++ GDHA+
Sbjct: 379 EALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAKL 436
>gi|195339411|ref|XP_002036313.1| GM17417 [Drosophila sechellia]
gi|194130193|gb|EDW52236.1| GM17417 [Drosophila sechellia]
Length = 2026
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 67/237 (28%)
Query: 17 IEELAELISA--ASFAESMSSLAVKPD-KCAILQETVNQCLNEKRRREQENNYIEELAEL 73
+ +A ISA A+ A S + K D K + Q +N+C NEKRRRE EN YIE+L+E+
Sbjct: 204 MNAVASPISANSANSATSGRKIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEI 263
Query: 74 ISAASFAESMSSLAVKPDKCAILQETVNQIRNI--------------------------- 106
++ + S+ KPDK AIL + V R I
Sbjct: 264 LTLNKRGDMTST---KPDKAAILNQVVRTYREICDKGQNRDISSTSTNNNNSTTTTNNNT 320
Query: 107 ---------KQQETSS------------DAVQQGEVSSSKPTVITNEVLGPLL------L 139
K Q TS+ VQQGEVSS++P + +L +
Sbjct: 321 NSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEVSSTEPLLPEPSLLLGQVPEISAYF 380
Query: 140 EALEGF-------LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHAR 189
EALE + L VN +G + CT+NI+ I Y +QE+ + +Y ++ GDHA+
Sbjct: 381 EALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGYEKQELYHQPLYMYLYSGDHAK 437
>gi|345324269|ref|XP_001507170.2| PREDICTED: circadian locomoter output cycles protein kaput-like
[Ornithorhynchus anatinus]
Length = 830
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 82/146 (56%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ + A K DK +LQ+T++ +R ++
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGS---------ARKMDKSTVLQKTIDFLRKHREI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E+I S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESITSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+HA + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHAAVYKTL 170
>gi|328704453|ref|XP_001945040.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
isoform 1 [Acyrthosiphon pisum]
Length = 660
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 81/138 (58%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ A SLA KPDK IL+ VN +++++
Sbjct: 55 NHCEIERRRRNKMTAYITELSDMVPACQ------SLARKPDKLTILRMAVNHMKSLRGTG 108
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
T++D + KP+ +T++ L L+LEA +GFLFVV D G V + ++++ + Y
Sbjct: 109 NTNNDG-------TYKPSFLTDQELKHLILEAADGFLFVVTCDTGRVIYVSDSVAPVLNY 161
Query: 169 SRQEVLGKSVYNLIHHGD 186
S+ + LG S+++ +H D
Sbjct: 162 SQNDWLGTSMFDHLHPED 179
>gi|328704457|ref|XP_003242496.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
isoform 3 [Acyrthosiphon pisum]
Length = 659
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 81/138 (58%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ A SLA KPDK IL+ VN +++++
Sbjct: 54 NHCEIERRRRNKMTAYITELSDMVPACQ------SLARKPDKLTILRMAVNHMKSLRGTG 107
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
T++D + KP+ +T++ L L+LEA +GFLFVV D G V + ++++ + Y
Sbjct: 108 NTNNDG-------TYKPSFLTDQELKHLILEAADGFLFVVTCDTGRVIYVSDSVAPVLNY 160
Query: 169 SRQEVLGKSVYNLIHHGD 186
S+ + LG S+++ +H D
Sbjct: 161 SQNDWLGTSMFDHLHPED 178
>gi|328704455|ref|XP_003242495.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
isoform 2 [Acyrthosiphon pisum]
Length = 652
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 81/138 (58%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ A SLA KPDK IL+ VN +++++
Sbjct: 55 NHCEIERRRRNKMTAYITELSDMVPACQ------SLARKPDKLTILRMAVNHMKSLRGTG 108
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
T++D + KP+ +T++ L L+LEA +GFLFVV D G V + ++++ + Y
Sbjct: 109 NTNNDG-------TYKPSFLTDQELKHLILEAADGFLFVVTCDTGRVIYVSDSVAPVLNY 161
Query: 169 SRQEVLGKSVYNLIHHGD 186
S+ + LG S+++ +H D
Sbjct: 162 SQNDWLGTSMFDHLHPED 179
>gi|195444134|ref|XP_002069729.1| GK11420 [Drosophila willistoni]
gi|194165814|gb|EDW80715.1| GK11420 [Drosophila willistoni]
Length = 651
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 15/146 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
++ E G S+Y+ IH D + L
Sbjct: 124 TQSEWYGTSLYDHIHADDREKIREQL 149
>gi|345481068|ref|XP_001605013.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Nasonia vitripennis]
Length = 690
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 80/138 (57%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 56 NHCEIERRRRNKMTAYITELSDMV------PTCSALARKPDKLTILRMAVAHMKALRGTG 109
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TS+D + KP+ +T++ L L+LEA +GFLFVV+ D G + + ++++ + Y
Sbjct: 110 NTSTDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDTGRIIYVSDSVAPVLNY 162
Query: 169 SRQEVLGKSVYNLIHHGD 186
S+ + G S+YN +H D
Sbjct: 163 SQSDWYGTSLYNQVHPDD 180
>gi|6715306|gb|AAF26365.1|AF201076_1 bHLH/PAS transcription factor Clock [Gallus gallus]
Length = 852
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 13/148 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVP 196
+++ +SV+N I G H+ + L P
Sbjct: 145 LPSDLVDQSVFNFIPEGGHSEIYKILSP 172
>gi|328777731|ref|XP_394708.4| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Apis mellifera]
Length = 685
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 81/138 (58%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V +RN++
Sbjct: 60 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMRNLRGTG 113
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ + G + + ++++ + Y
Sbjct: 114 NTSSDG-------AYKPSFLTDQELKHLILEAADGFLFVVSCNSGTIIYVSDSVAPVLNY 166
Query: 169 SRQEVLGKSVYNLIHHGD 186
++ + G S+Y+ +H D
Sbjct: 167 TQNDWYGTSLYSQVHPDD 184
>gi|73909162|gb|AAH41878.1| CLOCK protein [Homo sapiens]
gi|167773569|gb|ABZ92219.1| clock homolog (mouse) [synthetic construct]
Length = 846
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT I+NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFISNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|345779610|ref|XP_532376.3| PREDICTED: circadian locomoter output cycles protein kaput [Canis
lupus familiaris]
Length = 846
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E+I S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESITSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKML 170
>gi|7106459|ref|NP_031741.1| circadian locomoter output cycles protein kaput [Mus musculus]
gi|5921794|sp|O08785.1|CLOCK_MOUSE RecName: Full=Circadian locomoter output cycles protein kaput;
Short=mCLOCK
gi|4836806|gb|AAD30565.1|AF146793_2 CLOCK [Mus musculus]
gi|2114488|gb|AAC53200.1| CLOCK [Mus musculus]
gi|148705949|gb|EDL37896.1| circadian locomoter output cycles kaput, isoform CRA_b [Mus
musculus]
gi|151556646|gb|AAI48469.1| Circadian locomoter output cycles kaput [synthetic construct]
gi|162318658|gb|AAI56742.1| Circadian locomoter output cycles kaput [synthetic construct]
Length = 855
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKET 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|37359900|dbj|BAC97928.1| mKIAA0334 protein [Mus musculus]
Length = 857
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 39 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKET 89
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 90 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 146
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 147 LPSDLVDQSIFNFIPEGEHSEVYKIL 172
>gi|2367597|gb|AAB69695.1| aryl hydrocarbon receptor nuclear translocator-like protein
[Drosophila melanogaster]
Length = 631
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
++ + G S+Y IH D + L
Sbjct: 124 TQSDWYGTSLYEHIHPDDREKIREQL 149
>gi|410957611|ref|XP_003985419.1| PREDICTED: circadian locomoter output cycles protein kaput [Felis
catus]
Length = 843
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E+I S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESITSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|194744566|ref|XP_001954764.1| GF18433 [Drosophila ananassae]
gi|190627801|gb|EDV43325.1| GF18433 [Drosophila ananassae]
Length = 648
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
++ + G S+Y IH D + L
Sbjct: 124 TQSDWYGTSLYEHIHPDDREKIREQL 149
>gi|81916241|sp|Q91YB0.1|CLOCK_SPAGA RecName: Full=Circadian locomoter output cycles protein kaput
gi|16549040|emb|CAC85403.1| clock protein [Spalax galili]
Length = 865
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +SV+N I G+H+ + L
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEVYKIL 170
>gi|301767998|ref|XP_002919413.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Ailuropoda melanoleuca]
Length = 845
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E+I S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESITSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|149035205|gb|EDL89909.1| clock homolog (mouse), isoform CRA_a [Rattus norvegicus]
Length = 863
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG V + +E + S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSVVYVSETVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|81916242|sp|Q91YB2.1|CLOCK_SPACA RecName: Full=Circadian locomoter output cycles protein kaput
gi|16549042|emb|CAC85404.1| clock protein [Spalax carmeli]
Length = 865
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +SV+N I G+H+ + L
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEVYKIL 170
>gi|195330520|ref|XP_002031951.1| GM26289 [Drosophila sechellia]
gi|194120894|gb|EDW42937.1| GM26289 [Drosophila sechellia]
Length = 634
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
++ + G S+Y IH D + L
Sbjct: 124 TQSDWYGTSLYEHIHPDDREKIREQL 149
>gi|125778103|ref|XP_001359833.1| GA11313 [Drosophila pseudoobscura pseudoobscura]
gi|195157472|ref|XP_002019620.1| GL12493 [Drosophila persimilis]
gi|54639583|gb|EAL28985.1| GA11313 [Drosophila pseudoobscura pseudoobscura]
gi|194116211|gb|EDW38254.1| GL12493 [Drosophila persimilis]
Length = 646
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
++ + G S+Y IH D + L
Sbjct: 124 TQSDWYGTSLYEHIHPDDREKIREQL 149
>gi|2688932|gb|AAB88882.1| basic helix-loop-helix PAS protein [Drosophila melanogaster]
gi|5052000|gb|AAD38396.1| hypoxia-inducible factor 1b [Drosophila melanogaster]
Length = 644
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
++ + G S+Y IH D + L
Sbjct: 124 TQSDWYGTSLYEHIHPDDREKIREQL 149
>gi|24645243|ref|NP_731308.1| tango, isoform A [Drosophila melanogaster]
gi|442618130|ref|NP_001262397.1| tango, isoform B [Drosophila melanogaster]
gi|380865479|sp|O15945.3|ARNT_DROME RecName: Full=Aryl hydrocarbon receptor nuclear translocator
homolog; Short=dARNT; AltName: Full=Hypoxia-inducible
factor 1-beta; AltName: Full=Protein tango
gi|7299130|gb|AAF54329.1| tango, isoform A [Drosophila melanogaster]
gi|17862498|gb|AAL39726.1| LD32037p [Drosophila melanogaster]
gi|440217228|gb|AGB95779.1| tango, isoform B [Drosophila melanogaster]
Length = 642
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
++ + G S+Y IH D + L
Sbjct: 124 TQSDWYGTSLYEHIHPDDREKIREQL 149
>gi|281340205|gb|EFB15789.1| hypothetical protein PANDA_008040 [Ailuropoda melanoleuca]
Length = 810
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 2 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 52
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E+I S + +
Sbjct: 53 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESITSLLEH 109
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 110 LPSDLVDQSIFNFIPEGEHSEVYKIL 135
>gi|194903468|ref|XP_001980874.1| GG17399 [Drosophila erecta]
gi|190652577|gb|EDV49832.1| GG17399 [Drosophila erecta]
Length = 645
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
++ + G S+Y IH D + L
Sbjct: 124 TQSDWYGTSLYEHIHPDDREKIREQL 149
>gi|195111536|ref|XP_002000334.1| GI10175 [Drosophila mojavensis]
gi|193916928|gb|EDW15795.1| GI10175 [Drosophila mojavensis]
Length = 653
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
++ + G S+Y IH D + L
Sbjct: 124 TQSDWYGTSLYEHIHPDDRDKIREQL 149
>gi|297292899|ref|XP_002804151.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Macaca mulatta]
Length = 823
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|149035206|gb|EDL89910.1| clock homolog (mouse), isoform CRA_b [Rattus norvegicus]
Length = 833
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG V + +E + S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSVVYVSETVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|357605107|gb|EHJ64466.1| p160 coactivator FISC [Danaus plexippus]
Length = 1358
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 47 QETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNI 106
Q N+C NEKRRRE EN I +L EL+ AE +PDK I++E QI ++
Sbjct: 96 QSQQNKCHNEKRRRELENEVINQLEELLGTC-LAE-----VKQPDKNGIVREATRQIEDV 149
Query: 107 KQQETSSDA------------VQQGEVSSSKPTVITNEVLGPL--LLEALEGF------- 145
Q+ VQ GEVSS++ + L L+EA++ +
Sbjct: 150 LQRRRDCPGDCPLRVLQCLSPVQAGEVSSTQHQPSSGFQYSELSTLIEAIKHYTGVLGLI 209
Query: 146 LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWT 205
L +N G + TENIK I R E+ KS+++L+H DHA+ L + Q AW
Sbjct: 210 LMEINSKGEIECVTENIKDLILAERTELYKKSIFSLLHADDHAKIKPLL--RNIQNFAWG 267
Query: 206 SDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTAGLSRAGGENGQDDSGDVSSEGGPCL 265
S T S + + RLLI ++T G S S+E +
Sbjct: 268 S------------TESDKFQYIHARLLIKDANVTDGDSFVDTVIHAAPVRGSSTEEAGSV 315
Query: 266 MCVARR 271
MCV RR
Sbjct: 316 MCVIRR 321
>gi|6478192|gb|AAF13733.1| clock [Homo sapiens]
Length = 845
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|395843798|ref|XP_003794660.1| PREDICTED: circadian locomoter output cycles protein kaput
[Otolemur garnettii]
Length = 849
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|296196517|ref|XP_002745868.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Callithrix jacchus]
Length = 850
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|195395356|ref|XP_002056302.1| GJ10876 [Drosophila virilis]
gi|194143011|gb|EDW59414.1| GJ10876 [Drosophila virilis]
Length = 649
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
++ + G S+Y IH D + L
Sbjct: 124 TQSDWYGTSLYEHIHPDDRDKIREQL 149
>gi|191961770|ref|NP_001122127.1| clock [Xenopus (Silurana) tropicalis]
gi|189441921|gb|AAI67652.1| clock protein [Xenopus (Silurana) tropicalis]
Length = 829
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EKRRR+Q N I+EL ++ A + DK +LQ++++ +R K+
Sbjct: 28 VSRNKSEKRRRDQFNILIKELGSMLPGN---------ARRMDKSTVLQKSIDFLRKHKEI 78
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF V DG + + +E++ S + +
Sbjct: 79 SAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAVMTDGNIIYVSESVTSLLEH 135
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N + G+H+ + L
Sbjct: 136 LPSDLVDQSIFNFVPEGEHSEVYKIL 161
>gi|355749398|gb|EHH53797.1| hypothetical protein EGM_14498 [Macaca fascicularis]
Length = 850
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|355687417|gb|EHH26001.1| hypothetical protein EGK_15877, partial [Macaca mulatta]
Length = 816
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 2 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 52
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 53 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 109
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 110 LPSDLVDQSIFNFIPEGEHSEVYKIL 135
>gi|197097814|ref|NP_001125706.1| circadian locomoter output cycles protein kaput [Pongo abelii]
gi|75070732|sp|Q5RAK8.1|CLOCK_PONAB RecName: Full=Circadian locomoter output cycles protein kaput
gi|55728928|emb|CAH91202.1| hypothetical protein [Pongo abelii]
Length = 846
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|354499225|ref|XP_003511711.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Cricetulus griseus]
Length = 864
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|195972809|ref|NP_001124404.1| circadian locomoter output cycles protein kaput [Ovis aries]
gi|157780889|gb|ABV71922.1| clock [Ovis aries]
Length = 845
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|426344403|ref|XP_004038759.1| PREDICTED: circadian locomoter output cycles protein kaput [Gorilla
gorilla gorilla]
Length = 817
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|380818214|gb|AFE80981.1| circadian locomoter output cycles protein kaput [Macaca mulatta]
Length = 850
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|291401787|ref|XP_002717213.1| PREDICTED: clock [Oryctolagus cuniculus]
Length = 853
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|11177898|ref|NP_068628.1| circadian locomoter output cycles protein kaput [Rattus norvegicus]
gi|81917913|sp|Q9WVS9.1|CLOCK_RAT RecName: Full=Circadian locomoter output cycles protein kaput;
Short=rCLOCK
gi|5263200|dbj|BAA81819.1| CLOCK [Rattus norvegicus]
Length = 862
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E + S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSETVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|417412957|gb|JAA52836.1| Putative aryl-hydrocarbon receptor nuclear translocator, partial
[Desmodus rotundus]
Length = 860
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 38 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 88
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 89 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 145
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 146 LPSDLVDQSIFNFIPEGEHSEVYKIL 171
>gi|332238500|ref|XP_003268437.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Nomascus leucogenys]
gi|332238502|ref|XP_003268438.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Nomascus leucogenys]
Length = 846
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|195051493|ref|XP_001993106.1| GH13270 [Drosophila grimshawi]
gi|193900165|gb|EDV99031.1| GH13270 [Drosophila grimshawi]
Length = 2039
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 97/218 (44%), Gaps = 32/218 (14%)
Query: 2 KCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV----NQCLNEK 57
KC NEKRRRE ENNYIE+L+E + + S+ KPDK AIL + V + C +
Sbjct: 241 KCNNEKRRREMENNYIEQLSEFLQLNKRGDMTST---KPDKAAILNQVVRTYRDICDKGQ 297
Query: 58 RRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS---- 113
R + + + + ++ + N + K Q TS+
Sbjct: 298 SRDISSTSTNNNNNSTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNSHKPQATSTRCTR 357
Query: 114 --------DAVQQGEVSSSKPTVITNEVLGPLL------LEALEGF-------LFVVNPD 152
VQQGEVSS++P + +L + EALE + L VN +
Sbjct: 358 CATDNCSIHPVQQGEVSSTEPPLPEPSLLNGQVPEISAYFEALEHYISSVGWVLLQVNAN 417
Query: 153 GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
G + CT+NI+ I Y + E+ + +Y ++ GDHA+
Sbjct: 418 GIIESCTQNIRELIGYEKHELFHQPLYMYLYSGDHAKL 455
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 42 KCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVN 101
K + Q +N+C NEKRRRE ENNYIE+L+E + + S+ KPDK AIL + V
Sbjct: 231 KINLPQSQINKCNNEKRRREMENNYIEQLSEFLQLNKRGDMTST---KPDKAAILNQVVR 287
Query: 102 QIRNIKQQETSSD 114
R+I + S D
Sbjct: 288 TYRDICDKGQSRD 300
>gi|194209149|ref|XP_001492839.2| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Equus caballus]
gi|338723611|ref|XP_003364760.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Equus caballus]
Length = 846
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|156717516|ref|NP_001096298.1| uncharacterized protein LOC100124875 [Xenopus (Silurana)
tropicalis]
gi|134023843|gb|AAI35612.1| LOC100124875 protein [Xenopus (Silurana) tropicalis]
Length = 594
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 79/136 (58%), Gaps = 15/136 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETS-SD 114
EKRRRE+ NN IE L+ +I + L KPDK +L+ V ++++K S +D
Sbjct: 81 EKRRREKMNNLIENLSAMIPQSG------PLPSKPDKLTVLRMAVQHLKSLKGSNPSFAD 134
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ + +E + L+L A +GFLFV+ D G + F +E++ ++Y++ ++
Sbjct: 135 -------ESPKPSFLKHEEMKQLILRAADGFLFVIGCDRGEILFVSESVTKTLKYNQGDL 187
Query: 174 LGKSVYNLIHHGDHAR 189
+GKS+++ +H D A+
Sbjct: 188 MGKSLFDFLHPKDVAK 203
>gi|359066462|ref|XP_002688303.2| PREDICTED: circadian locomoter output cycles protein kaput [Bos
taurus]
Length = 844
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|296486572|tpg|DAA28685.1| TPA: clock-like [Bos taurus]
Length = 845
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|114594708|ref|XP_001143582.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Pan troglodytes]
gi|114594718|ref|XP_001144028.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
8 [Pan troglodytes]
gi|397469782|ref|XP_003806520.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Pan paniscus]
gi|397469784|ref|XP_003806521.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Pan paniscus]
gi|410216588|gb|JAA05513.1| clock homolog [Pan troglodytes]
gi|410266798|gb|JAA21365.1| clock homolog [Pan troglodytes]
gi|410290386|gb|JAA23793.1| clock homolog [Pan troglodytes]
gi|410333901|gb|JAA35897.1| clock homolog [Pan troglodytes]
Length = 847
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|62898830|dbj|BAD97269.1| clock variant [Homo sapiens]
Length = 846
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|4758010|ref|NP_004889.1| circadian locomoter output cycles protein kaput [Homo sapiens]
gi|392841204|ref|NP_001254772.1| circadian locomoter output cycles protein kaput [Homo sapiens]
gi|6166009|sp|O15516.1|CLOCK_HUMAN RecName: Full=Circadian locomoter output cycles protein kaput;
Short=hCLOCK; AltName: Full=Class E basic
helix-loop-helix protein 8; Short=bHLHe8
gi|2275619|gb|AAB83969.1| CLOCK [Homo sapiens]
gi|116496623|gb|AAI26160.1| Clock homolog (mouse) [Homo sapiens]
gi|116496921|gb|AAI26158.1| Clock homolog (mouse) [Homo sapiens]
gi|119625873|gb|EAX05468.1| clock homolog (mouse) [Homo sapiens]
gi|121647006|gb|ABM64208.1| CLOCK [Homo sapiens]
gi|158256848|dbj|BAF84397.1| unnamed protein product [Homo sapiens]
gi|168267306|dbj|BAG09709.1| clock homolog [synthetic construct]
gi|313883870|gb|ADR83421.1| Unknown protein [synthetic construct]
Length = 846
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|40788216|dbj|BAA20792.2| KIAA0334 [Homo sapiens]
Length = 848
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 39 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 89
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 90 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 146
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 147 LPSDLVDQSIFNFIPEGEHSEVYKIL 172
>gi|402869776|ref|XP_003898923.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Papio anubis]
gi|402869778|ref|XP_003898924.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Papio anubis]
Length = 847
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|344288390|ref|XP_003415933.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Loxodonta africana]
Length = 848
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|403284624|ref|XP_003933662.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Saimiri boliviensis boliviensis]
gi|403284626|ref|XP_003933663.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Saimiri boliviensis boliviensis]
Length = 845
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|390338568|ref|XP_001186690.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Strongylocentrotus purpuratus]
Length = 407
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 82/132 (62%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRRE+ N YI+EL+ ++ S SMSS K DK IL+ V ++ ++ +S
Sbjct: 54 EKRRREKMNTYIQELSAMVPTCS---SMSS---KLDKLTILRMAVQHMKTLRGASSSR-- 105
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ ++ KP+ ++ + L PL+LEA EGFLFVV+ D G V + +E++ + + + + ++
Sbjct: 106 ----KEANYKPSFLSEDDLNPLILEAAEGFLFVVSCDRGRVLYVSESVLNVLNITWERLI 161
Query: 175 GKSVYNLIHHGD 186
G+S+++++H D
Sbjct: 162 GQSLFDILHPKD 173
>gi|440903376|gb|ELR54047.1| hypothetical protein M91_21411, partial [Bos grunniens mutus]
Length = 829
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 22 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 72
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 73 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 129
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 130 LPSDLVDQSIFNFIPEGEHSEVYKIL 155
>gi|15822818|dbj|BAB68768.1| CLOCK-S [Rattus norvegicus]
Length = 832
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E + S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSETVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|74217223|dbj|BAC30568.2| unnamed protein product [Mus musculus]
Length = 272
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKET 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|195572389|ref|XP_002104178.1| GD20825 [Drosophila simulans]
gi|194200105|gb|EDX13681.1| GD20825 [Drosophila simulans]
Length = 424
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 111/240 (46%), Gaps = 30/240 (12%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ S +LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD--------SGGQAGKRPSLTA 220
++ + G S+Y IH D + L Q D G Q+ R S+ A
Sbjct: 124 TQSDWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGA 183
Query: 221 STPNRTFNIRLLISSTH----LTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTD 276
R F R+ + + + ++ L+R N S D ++ + PPTD
Sbjct: 184 ---RRGFICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGYIKNWPPTD 240
>gi|82206300|sp|Q6YGZ4.1|CLOCK_TYTAL RecName: Full=Circadian locomoter output cycles protein kaput
gi|37722553|gb|AAO06119.1| CLOCK [Tyto alba]
Length = 851
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E+I + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESITPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 173
>gi|449500804|ref|XP_002195620.2| PREDICTED: circadian locomoter output cycles protein kaput
[Taeniopygia guttata]
Length = 900
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 83 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 133
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E+I + +
Sbjct: 134 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESITPLLEH 190
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 191 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 219
>gi|4903294|gb|AAD32860.1|AF144425_1 CLOCK protein [Gallus gallus]
Length = 853
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 145 LPSDLVDQSVFNFIPQGEHSEIYKIL--SSH 173
>gi|390346232|ref|XP_781474.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
isoform 2 [Strongylocentrotus purpuratus]
Length = 760
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 15/149 (10%)
Query: 39 KPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQE 98
KPDK +E N E+RRR + YI EL++++ S S+LA KPDK IL+
Sbjct: 39 KPDKGHFARE--NHSEIERRRRNKMTAYITELSDMVP------SCSALARKPDKLTILRM 90
Query: 99 TVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNF 157
V+ +++++ +S + KP+ +T++ L L+LEA +GFLFV + G + +
Sbjct: 91 AVSHMKSLRGTGNTSTE------GTYKPSFLTDQELKHLILEAADGFLFVTSCESGRIIY 144
Query: 158 CTENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + + +G SVY+L+H D
Sbjct: 145 VSDSVTPVLNQPQNDWIGGSVYDLVHTDD 173
>gi|118572227|sp|Q8QGQ6.2|CLOCK_CHICK RecName: Full=Circadian locomoter output cycles protein kaput
Length = 875
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 173
>gi|195499307|ref|XP_002096893.1| GE24803 [Drosophila yakuba]
gi|194182994|gb|EDW96605.1| GE24803 [Drosophila yakuba]
Length = 641
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TS+D + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSTDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
++ + G S+Y IH D + L
Sbjct: 124 TQSDWYGTSLYEHIHPDDREKIREQL 149
>gi|19773562|gb|AAL98708.1|AF246959_1 CLOCK [Gallus gallus]
Length = 853
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 173
>gi|326919172|ref|XP_003205856.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
1 [Meleagris gallopavo]
Length = 850
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 173
>gi|2547046|dbj|BAA22868.1| bHLH-PAS transcription factor [Drosophila melanogaster]
Length = 642
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G + + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRMIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
++ + G S+Y IH D + L
Sbjct: 124 TQSDWYGTSLYEHIHPDDREKIREQL 149
>gi|326919174|ref|XP_003205857.1| PREDICTED: circadian locomoter output cycles protein kaput isoform
2 [Meleagris gallopavo]
Length = 873
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 173
>gi|227437411|gb|ACP30468.1| PAS domain protein 1 variant [Murina leucogaster]
Length = 521
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 81/145 (55%), Gaps = 11/145 (7%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
SDA + + KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDASEIRQ--DWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHL 145
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 146 PSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|81916239|sp|Q91YA8.1|CLOCK_SPAJD RecName: Full=Circadian locomoter output cycles protein kaput
gi|16549044|emb|CAC85405.1| clock protein [Spalax judaei]
Length = 865
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A + DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------AREMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +SV+N I G+H+ + L
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEVYKIL 170
>gi|116256291|gb|ABJ90475.1| clock [Equus caballus]
Length = 176
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 12 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 62
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 63 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 119
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 120 LPSDLVDQSIFNFIPEGEHSEVYKIL 145
>gi|195038079|ref|XP_001990488.1| GH18221 [Drosophila grimshawi]
gi|193894684|gb|EDV93550.1| GH18221 [Drosophila grimshawi]
Length = 645
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFL+VV+ D G V + ++++ + Y
Sbjct: 71 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLYVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGD 186
++ + G S+Y IH D
Sbjct: 124 TQSDWYGTSLYEHIHPDD 141
>gi|449273410|gb|EMC82904.1| Circadian locomoter output cycles protein kaput [Columba livia]
Length = 226
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E+I + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESITPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 173
>gi|357628246|gb|EHJ77636.1| putative arylhydrocarbon receptor nuclear translocator-like protein
b [Danaus plexippus]
Length = 641
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 111/248 (44%), Gaps = 30/248 (12%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 56 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 109
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TS+D + KP+ +T++ L L+LEA +GFLFVV+ D G + + +++I + Y
Sbjct: 110 NTSTDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDTGRIIYVSDSIAPVLNY 162
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD--------SGGQAGKRPSLTA 220
S+ E Y+ +H D + L Q D G Q+ R + +
Sbjct: 163 SQGEWYSSCFYDQVHPDDLEKVREQLSTQEPQNTGRILDLKTGTVKKEGHQSSMRQVMGS 222
Query: 221 STPNRTFNIRLLISSTHLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTD---- 276
R F R+ + T +A L R N S D + + PPTD
Sbjct: 223 ---RRGFICRMRVGGTAESAHLGRLRARNSLGPSHDGHNYAVVHCTGYIKNWPPTDLFPG 279
Query: 277 KQLSAPIE 284
Q+ P+E
Sbjct: 280 MQMDRPVE 287
>gi|383856080|ref|XP_003703538.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Megachile rotundata]
Length = 668
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 79/138 (57%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V +R ++
Sbjct: 43 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMRALRGTG 96
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TS D + KP+ +T++ L L+LEA +GFLFVV+ D G + + ++++ + Y
Sbjct: 97 NTSPDG-------AYKPSFLTDQELKHLILEAADGFLFVVSCDTGRIIYVSDSVAPVLNY 149
Query: 169 SRQEVLGKSVYNLIHHGD 186
++ + G S+Y+ +H D
Sbjct: 150 TQNDWYGTSLYSQVHPDD 167
>gi|395542792|ref|XP_003773309.1| PREDICTED: circadian locomoter output cycles protein kaput
[Sarcophilus harrisii]
Length = 886
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%), Gaps = 13/147 (8%)
Query: 49 TVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ 108
TV++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 122 TVSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKE 172
Query: 109 QETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIR 167
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ +
Sbjct: 173 ITAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTPLLE 229
Query: 168 YSRQEVLGKSVYNLIHHGDHARFHNCL 194
+ +++ +S++N I G+H+ + L
Sbjct: 230 HLPSDLVDQSIFNFIPEGEHSEVYKML 256
>gi|335293550|ref|XP_003356992.1| PREDICTED: circadian locomoter output cycles protein kaput [Sus
scrofa]
Length = 407
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 81/145 (55%), Gaps = 11/145 (7%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
SDA + + KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDASEIRQ--DWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHL 145
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +SV+N I G+H+ + L
Sbjct: 146 PSDLVDQSVFNFIPEGEHSEVYKIL 170
>gi|388883587|dbj|BAM17304.1| steroid receptor coactivator [Bombyx mori]
Length = 1221
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 32/172 (18%)
Query: 47 QETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNI 106
Q +N+C NEK RR+ EN I +L EL+ AE +PDK I++E QI+ +
Sbjct: 95 QTQINKCQNEKERRKLENETINQLEELLGTC-LAE-----VKQPDKNGIVREATRQIQEV 148
Query: 107 --KQQETSSD----------AVQQGEVSSSKPTVI-----TNEVLGPLLLEALEGF---- 145
+++E S+ VQ GE+SS++P + +EV L+EAL+ +
Sbjct: 149 LKRRRECPSECPLRSPQCLSPVQAGEISSTQPQLPCTGLHYSEVT--TLIEALKHYTNNL 206
Query: 146 ---LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCL 194
L +N G + ++NIK FI + R E+ KS+++++H DHA+ L
Sbjct: 207 GWVLLEINSKGEIECVSDNIKEFILHERTELYRKSIFSILHEKDHAKLRPLL 258
>gi|390136660|pdb|4F3L|A Chain A, Crystal Structure Of The Heterodimeric Clock:bmal1
Transcriptional Activator Complex
Length = 361
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 81/145 (55%), Gaps = 11/145 (7%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 14 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKET 64
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
SDA + + KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 65 TAQSDASEIRQ--DWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHL 122
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 123 PSDLVDQSIFNFIPEGEHSEVYKIL 147
>gi|6466210|gb|AAF12827.1|AF203107_1 circadian rhythmicity protein CLOCK [Xenopus laevis]
Length = 778
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 77/141 (54%), Gaps = 13/141 (9%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EKRRR+Q N I+EL ++ A + DK +L ++++ +R K+ SD
Sbjct: 33 SEKRRRDQFNILIKELGSMLPGN---------ARRMDKSTVLHKSIDYLRKHKEISAQSD 83
Query: 115 AVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
A E+ KPT ++NE L+LEAL+GF V DG + + +E++ S + + ++
Sbjct: 84 A---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAVMTDGNIIYVSESVTSLLEHLPSDL 140
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
+ +S++N + G+H+ + L
Sbjct: 141 VDQSIFNFVPEGEHSEVYKIL 161
>gi|2326259|dbj|BAA21774.1| Clock [Homo sapiens]
Length = 349
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 81/145 (55%), Gaps = 11/145 (7%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
SDA + + KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDASEIRQ--DWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHL 145
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 146 PSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|47207806|emb|CAF89986.1| unnamed protein product [Tetraodon nigroviridis]
Length = 441
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N+ IEEL+ +I A +A K DK +L++ V ++ +K E+
Sbjct: 8 EKRRRDKMNHLIEELSAMIPACQ------HMAQKLDKLTVLRKAVQHLKALKGTESGGAF 61
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP+++ N+ L LLL A +GFL VV+ D + F +E++ + +S E+
Sbjct: 62 TH----TTHKPSILPNDELRQLLLRAADGFLLVVSCDRAKILFISESVSEILNFSPLELT 117
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTAST 222
G+S+++ IH D + L SS N D+ ++G R S + T
Sbjct: 118 GQSLFDFIHPKDITKVKEQLA-SSELHNHRLIDAASESGPRASRSRQT 164
>gi|358420903|ref|XP_003584759.1| PREDICTED: circadian locomoter output cycles protein kaput [Bos
taurus]
Length = 508
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 81/145 (55%), Gaps = 11/145 (7%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
SDA + + KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDASEIRQ--DWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHL 145
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 146 PSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|405967670|gb|EKC32806.1| Aryl hydrocarbon receptor nuclear translocator-like protein
[Crassostrea gigas]
Length = 698
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 17/148 (11%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK +E+ C E+RRR + +YI EL +++ S +LA KPDK IL+ V
Sbjct: 83 DKERFARES--HCEIERRRRNKMTSYINELCDMVPTCS------TLARKPDKLTILRMAV 134
Query: 101 NQIRNIK-QQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ ++ ++ TS D S KP+ +T++ L L+LEA +GFLFVV D G + +
Sbjct: 135 SHMKTLRVAGNTSVDG-------SYKPSFLTDQELKHLILEAADGFLFVVQCDSGRLIYV 187
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
+++I + S+ + G S+Y+L+H D
Sbjct: 188 SDSITQVLHQSQADWFGNSMYDLVHPDD 215
>gi|189233619|ref|XP_970422.2| PREDICTED: similar to arylhydrocarbon receptor nuclear translocator
homolog b [Tribolium castaneum]
Length = 661
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 81 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 134
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TS+D + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 135 NTSADG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDTGRVIYVSDSVAPVLNY 187
Query: 169 SRQEVLGKSVYNLIHHGD 186
S+ + G +Y+ IH D
Sbjct: 188 SQSDWYGSCLYDNIHPED 205
>gi|334331253|ref|XP_001370711.2| PREDICTED: circadian locomoter output cycles protein kaput
[Monodelphis domestica]
Length = 858
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL 170
>gi|37698406|gb|AAR00509.1|AF416453_1 clock-like protein [Passer domesticus]
Length = 248
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 6 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 56
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E+I + +
Sbjct: 57 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESITPLLEH 113
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 114 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 142
>gi|262477844|gb|ACY68220.1| tango [Delia radicum]
Length = 361
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 15/137 (10%)
Query: 52 QCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-E 110
C E+RRR + YI EL++++ S +LA KPDK IL+ V ++ ++
Sbjct: 1 HCEIERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVAHMKALRGTGN 54
Query: 111 TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYS 169
TSSD + KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y+
Sbjct: 55 TSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNYT 107
Query: 170 RQEVLGKSVYNLIHHGD 186
+ + G S+Y+ IH D
Sbjct: 108 QSDWYGTSLYDHIHPDD 124
>gi|443709976|gb|ELU04396.1| hypothetical protein CAPTEDRAFT_199895 [Capitella teleta]
Length = 824
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 20/178 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EK RR++ N YI ELA+++ ++ K DK +IL+ TV +R D
Sbjct: 65 EKLRRDRLNAYIGELAKVVPLVMQSDK------KMDKASILRLTVTYLR------IHHDL 112
Query: 116 VQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
V+ E KP +T E L LLL+ ++GF+ V+N G + + TE + ++ + +VL
Sbjct: 113 VKNTETDMKWKPDQLTMENLANLLLQCIDGFMLVLNQRGVMLYATEALNEYLGHQLVDVL 172
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
G S + L+H D Q N D +AG PS +R+FNIR+L
Sbjct: 173 GTSFFKLVHPEDVETLRK-------QFNFRNRDEDTEAGSGPSHVPVAGHRSFNIRIL 223
>gi|195156677|ref|XP_002019223.1| GL26249 [Drosophila persimilis]
gi|194115376|gb|EDW37419.1| GL26249 [Drosophila persimilis]
Length = 1684
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 91/222 (40%), Gaps = 76/222 (34%)
Query: 42 KCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVN 101
K + Q +N+C NEKRRRE EN YIE+L+E+++ + S+ KPDK AIL + V
Sbjct: 225 KVNLPQSQINKCNNEKRRREAENGYIEQLSEILTLNKRGDMTST---KPDKAAILNQVVR 281
Query: 102 QIRNI-------------------------------------------KQQETSS----- 113
R I K Q TS+
Sbjct: 282 TYREICDKGQNRDISSTSTNNNNSTATTNNNTNNNNNNSNSNNNNNNSKPQTTSTPRCSR 341
Query: 114 --------DAVQQGEVSSSKPTVITNEVLGPL----------LLEALEGF-------LFV 148
VQQGEVSS++P + L EALE + L
Sbjct: 342 CATDNCSIHPVQQGEVSSTEPPLPLPLPEPSLLLGQVPEISAYFEALEHYISGVGWVLLQ 401
Query: 149 VNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
VN +G + CT+NI+ I Y +QE+ + +Y ++ GDHA+
Sbjct: 402 VNANGIIESCTQNIRELIGYEKQELYHQPLYMYLYAGDHAKL 443
>gi|296010952|ref|NP_001083854.2| clock circadian regulator [Xenopus laevis]
gi|6984144|gb|AAF34772.1|AF227985_1 Clock [Xenopus laevis]
Length = 825
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EKRRR+Q N I+EL ++ A + DK +LQ++++ ++ K+
Sbjct: 28 VSRNKSEKRRRDQFNILIKELGSMLPGN---------ARRIDKSTVLQKSIDFLQKHKEI 78
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF V DG + + +E++ S + +
Sbjct: 79 SAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAVMTDGNIIYVSESVTSLLEH 135
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N + G+H+ + L
Sbjct: 136 LPSDLVDQSIFNFVPEGEHSEVYKIL 161
>gi|124430743|ref|NP_989505.2| circadian locomoter output cycles protein kaput [Gallus gallus]
gi|5442153|gb|AAD43283.1|AF132531_1 CLOCK [Gallus gallus]
Length = 875
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT +NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFPSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 173
>gi|118763938|gb|AAI28807.1| Arntl2 protein [Danio rerio]
Length = 631
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 96/171 (56%), Gaps = 20/171 (11%)
Query: 22 ELISAASFAESMSSLAVKPD-----KCAILQETVNQCLNEKRRREQENNYIEELAELISA 76
E+ SA++ E M A + + K ++E +Q EKRRR++ NN I+ELA +I
Sbjct: 61 EMKSASNLDEDMEDDAGRSEDDQHLKIKCIREPHSQI--EKRRRDKMNNLIDELAAMIP- 117
Query: 77 ASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGP 136
+ + ++ K DK +L+ V ++++K TSS A ++ KP + ++ L
Sbjct: 118 -----TCNPMSRKLDKLTVLRMAVQHLKSLKGA-TSSFAE-----ANYKPAFLPDDELKH 166
Query: 137 LLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGD 186
L+L A +GFLFVV D G + F +E++ + YSR E++G+S+++ +H D
Sbjct: 167 LVLRAADGFLFVVGCDRGKIVFVSESVSKTLNYSRTELIGQSLFDYVHPKD 217
>gi|210136300|gb|ACJ08742.1| cycle [Neobellieria bullata]
Length = 410
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 78/135 (57%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I ++ K DK +L+ V +R+I+ A
Sbjct: 38 EKRRRDKMNTYINELSSMIPMCY------AMHRKLDKLTVLRMAVQHLRSIR------GA 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KPT ++++ L L+L+A EGFLFVV D G + + +E++ + + YS+ ++L
Sbjct: 86 VHAYSGGDCKPTFLSDQELKMLILQAAEGFLFVVGCDRGRILYVSESVSNVLNYSQTDLL 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S ++++H D A+
Sbjct: 146 GQSWFDVLHPKDVAK 160
>gi|42542710|gb|AAH66388.1| Arntl2 protein [Danio rerio]
Length = 500
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 96/171 (56%), Gaps = 20/171 (11%)
Query: 22 ELISAASFAESMSSLAVKPD-----KCAILQETVNQCLNEKRRREQENNYIEELAELISA 76
E+ SA++ E M A + + K ++E +Q EKRRR++ NN I+ELA +I
Sbjct: 61 EMKSASNLDEDMEDDAGRSEDDQHLKIKCIREPHSQI--EKRRRDKMNNLIDELAAMIP- 117
Query: 77 ASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGP 136
+ + ++ K DK +L+ V ++++K TSS A ++ KP + ++ L
Sbjct: 118 -----TCNPMSRKLDKLTVLRMAVQHLKSLKGA-TSSFAE-----ANYKPAFLPDDELKH 166
Query: 137 LLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGD 186
L+L A +GFLFVV D G + F +E++ + YSR E++G+S+++ +H D
Sbjct: 167 LVLRAADGFLFVVGCDRGKIVFVSESVSKTLNYSRTELIGQSLFDYVHPKD 217
>gi|198472116|ref|XP_001355842.2| GA12050 [Drosophila pseudoobscura pseudoobscura]
gi|198139611|gb|EAL32901.2| GA12050 [Drosophila pseudoobscura pseudoobscura]
Length = 2103
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 91/223 (40%), Gaps = 77/223 (34%)
Query: 42 KCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVN 101
K + Q +N+C NEKRRRE EN YIE+L+E+++ + S+ KPDK AIL + V
Sbjct: 223 KVNLPQSQINKCNNEKRRREAENGYIEQLSEILTLNKRGDMTST---KPDKAAILNQVVR 279
Query: 102 QIRNI--------------------------------------------KQQETSS---- 113
R I K Q TS+
Sbjct: 280 TYREICDKGQNRDISSTSTNNNNSTATTNNNTNNNNNNSNSNNNNNNNSKPQTTSTPRCS 339
Query: 114 ---------DAVQQGEVSSSKPTVITNEVLGPL----------LLEALEGF-------LF 147
VQQGEVSS++P + L EALE + L
Sbjct: 340 RCATDNCSIHPVQQGEVSSTEPPLPLPLPEPSLLLGQVPEISAYFEALEHYISGVGWVLL 399
Query: 148 VVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
VN +G + CT+NI+ I Y +QE+ + +Y ++ GDHA+
Sbjct: 400 QVNANGIIESCTQNIRELIGYEKQELYHQPLYMYLYAGDHAKL 442
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 2 KCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 50
KC NEKRRRE EN YIE+L+E+++ + S+ KPDK AIL + V
Sbjct: 233 KCNNEKRRREAENGYIEQLSEILTLNKRGDMTST---KPDKAAILNQVV 278
>gi|18858361|ref|NP_571653.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
[Danio rerio]
gi|7595272|gb|AAF64396.1|AF144691_1 Bmal2 [Danio rerio]
Length = 575
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 96/171 (56%), Gaps = 20/171 (11%)
Query: 22 ELISAASFAESMSSLAVKPD-----KCAILQETVNQCLNEKRRREQENNYIEELAELISA 76
E+ SA++ E M A + + K ++E +Q EKRRR++ NN I+ELA +I
Sbjct: 5 EMKSASNLDEDMEDDAGRSEDDQHLKIKCIREPHSQI--EKRRRDKMNNLIDELAAMIP- 61
Query: 77 ASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGP 136
+ + ++ K DK +L+ V ++++K TSS A ++ KP + ++ L
Sbjct: 62 -----TCNPMSRKLDKLTVLRMAVQHLKSLKGA-TSSFAE-----ANYKPAFLPDDELKH 110
Query: 137 LLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGD 186
L+L A +GFLFVV D G + F +E++ + YSR E++G+S+++ +H D
Sbjct: 111 LVLRAADGFLFVVGCDRGKIVFVSESVSKTLNYSRTELIGQSLFDYVHPKD 161
>gi|147898769|ref|NP_001090894.1| aryl hydrocarbon receptor nuclear translocator-like protein 1 [Sus
scrofa]
gi|124495049|gb|ABN13601.1| BMAL1 [Sus scrofa]
Length = 626
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++N+ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSNDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|327273712|ref|XP_003221624.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Anolis carolinensis]
Length = 916
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 80/146 (54%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 97 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 147
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 148 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTPLLEH 204
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N + G+H+ + L
Sbjct: 205 LPSDLVDQSIFNFVPEGEHSEVYKIL 230
>gi|301557927|gb|ADK78984.1| SRC-1 [Canis lupus familiaris]
Length = 106
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 55/73 (75%), Gaps = 6/73 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSS 124
+ D VQ+ ++SSS
Sbjct: 90 TDDEVQKSDISSS 102
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q + +R EQE +
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQ-IQLMKRMEQEKS 88
Query: 66 YIEE 69
++
Sbjct: 89 TTDD 92
>gi|339251662|ref|XP_003372853.1| muscle cell intermediate filament protein OV71 [Trichinella
spiralis]
gi|316968799|gb|EFV53021.1| muscle cell intermediate filament protein OV71 [Trichinella
spiralis]
Length = 551
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-TSSD 114
E+RRR + +YI ELA+++ + L +PDK IL+ V+ ++ I+ E TSSD
Sbjct: 26 ERRRRNKMTHYINELADMVPQCA------GLGRRPDKLTILRMAVSHMKAIRNCEGTSSD 79
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
SS +P+ +T++ L L+LEA GF+ VV D G V F ++I + ++ E
Sbjct: 80 -------SSYRPSFLTDQELKHLVLEAANGFMLVVGCDSGKVLFVADSIYPVLNLTQAEC 132
Query: 174 LGKSVYNLIHHGD 186
+G S+Y+L+H D
Sbjct: 133 IGHSIYDLVHPED 145
>gi|195433404|ref|XP_002064702.1| GK15071 [Drosophila willistoni]
gi|194160787|gb|EDW75688.1| GK15071 [Drosophila willistoni]
Length = 1685
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 2 KCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV---NQCLNEKR 58
KC NEKRRRE ENNYIE+L+E + + S+ KPDK AIL + V ++ +
Sbjct: 251 KCNNEKRRREMENNYIEQLSEFLQLNKRGDMTST---KPDKAAILNQVVRTYRDICDKGQ 307
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS----- 113
R+ + I+ + S ++ + T N N K Q TS+
Sbjct: 308 SRDISSTSTNNNNSTITTNNNHSSSNNNNNNNNNNNNNNNTNNNNNNSKPQATSTRCTRC 367
Query: 114 -------DAVQQGEVSSSKPTVITNEVL-GPL-----LLEALEGF-------LFVVNPDG 153
VQQGEVSS++P + +L G + EA+E + L VN +G
Sbjct: 368 ATDNCSIHPVQQGEVSSTEPPLPEPSLLIGQVPEISAYFEAVEHYISSVGWVLLQVNANG 427
Query: 154 YVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
+ CT+NI+ I Y +QE+ + + ++ GDHA+
Sbjct: 428 IIESCTQNIRELIGYEKQELYHQPLCMYLYQGDHAKL 464
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 17 IEELAELISAASFAESMSSLAVKPD-KCAILQETVNQCLNEKRRREQENNYIEELAELIS 75
+ +A ISA S A S + K D K + Q +N+C NEKRRRE ENNYIE+L+E +
Sbjct: 216 MNAVASPISANS-ATSARKIRRKTDPKVNLPQSQINKCNNEKRRREMENNYIEQLSEFLQ 274
Query: 76 AASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+ S+ KPDK AIL + V R+I + S D
Sbjct: 275 LNKRGDMTST---KPDKAAILNQVVRTYRDICDKGQSRD 310
>gi|2094735|dbj|BAA19935.1| BMAL1b [Homo sapiens]
Length = 626
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V +R ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMRTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|58743327|ref|NP_001007790.1| aryl hydrocarbon receptor nuclear translocator isoform a [Danio
rerio]
gi|51979537|gb|AAU20374.1| aryl hydrocarbon receptor nuclear translocator type 1a [Danio
rerio]
Length = 503
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 27/187 (14%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ A S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 72 ERRRRNKMTAYITELSDMVPACS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 125
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLFVV+ + G V + ++++ + ++ +
Sbjct: 126 G-------TYKPSFLTDQELKHLILEAADGFLFVVSCETGRVVYVSDSVTPVLNQAQSDW 178
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAW---------TSDSGGQAGKRPSLTASTPN 224
LG S+Y+ +H D + L + + N+ GGQA R S+ A
Sbjct: 179 LGSSLYDQLHPDDVEKLREQLSTTENNNNSGRMLDMKTGTVKKEGGQATVRMSMGA---R 235
Query: 225 RTFNIRL 231
R+F R+
Sbjct: 236 RSFICRM 242
>gi|242023817|ref|XP_002432327.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517750|gb|EEB19589.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 607
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 13/143 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI ELA ++ + K DK +L+ V +R+I+
Sbjct: 67 EKRRRDKMNTYITELANMVPICH------ANPRKLDKLTVLRMAVQHLRSIR------GT 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KPT +++E L L+L+A +GFLFVV D G + F +E++ + YS+ ++L
Sbjct: 115 VHSYTEGHYKPTFLSDEELKNLILQAADGFLFVVGCDRGRILFVSESVSEILNYSQSDLL 174
Query: 175 GKSVYNLIHHGDHARFHNCLVPS 197
G+S ++++H D A+ L S
Sbjct: 175 GQSWFDILHPKDVAKVKEQLFSS 197
>gi|30231256|ref|NP_840085.1| aryl hydrocarbon receptor nuclear translocator-like 1b [Danio
rerio]
gi|21685554|dbj|BAC02688.1| bHLH-PAS transcription factor [Danio rerio]
Length = 622
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 94/172 (54%), Gaps = 20/172 (11%)
Query: 24 ISAASFAESMSSLAVKPDKCAILQ-----ETVNQCLNEKRRREQENNYIEELAELISAAS 78
I SF +SM + KP A Q E +Q EKRRR++ N++I+ELA L+ +
Sbjct: 48 IDGFSFEDSMDTDKDKPLGRADQQMKNAREAHSQI--EKRRRDKMNSFIDELASLVPTCN 105
Query: 79 FAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLL 138
+++ K DK +L+ V ++ ++ A ++ KP ++++ L L+
Sbjct: 106 ------AMSRKLDKLTVLRMAVQHMKTLRG------AANPYTEANYKPAFLSDDELKHLI 153
Query: 139 LEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHAR 189
L+A +GFLFVV D G + F +E++ + YS+ +++G+S+++ +H D A+
Sbjct: 154 LKAADGFLFVVGCDRGKILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAK 205
>gi|113674860|ref|NP_001038736.1| aryl hydrocarbon receptor nuclear translocator isoform c [Danio
rerio]
gi|94574389|gb|AAI16610.1| Aryl hydrocarbon receptor nuclear translocator [Danio rerio]
Length = 440
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 27/187 (14%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ A S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 72 ERRRRNKMTAYITELSDMVPACS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 125
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLFVV+ + G V + ++++ + ++ +
Sbjct: 126 G-------TYKPSFLTDQELKHLILEAADGFLFVVSCETGRVVYVSDSVTPVLNQAQSDW 178
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAW---------TSDSGGQAGKRPSLTASTPN 224
LG S+Y+ +H D + L + + N+ GGQA R S+ A
Sbjct: 179 LGSSLYDQLHPDDVEKLREQLSTTENNNNSGRMLDMKTGTVKKEGGQATVRMSMGA---R 235
Query: 225 RTFNIRL 231
R+F R+
Sbjct: 236 RSFICRM 242
>gi|58743314|ref|NP_001011712.1| aryl hydrocarbon receptor nuclear translocator isoform b [Danio
rerio]
gi|51979543|gb|AAU20375.1| aryl hydrocarbon receptor nuclear translocator type 1b [Danio
rerio]
Length = 404
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 27/187 (14%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ A S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 72 ERRRRNKMTAYITELSDMVPACS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 125
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLFVV+ + G V + ++++ + ++ +
Sbjct: 126 G-------TYKPSFLTDQELKHLILEAADGFLFVVSCETGRVVYVSDSVTPVLNQAQSDW 178
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAW---------TSDSGGQAGKRPSLTASTPN 224
LG S+Y+ +H D + L + + N+ GGQA R S+ A
Sbjct: 179 LGSSLYDQLHPDDVEKLREQLSTTENNNNSGRMLDMKTGTVKKEGGQATVRMSMGA---R 235
Query: 225 RTFNIRL 231
R+F R+
Sbjct: 236 RSFICRM 242
>gi|441646081|ref|XP_004090715.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 [Nomascus leucogenys]
Length = 633
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 101/196 (51%), Gaps = 32/196 (16%)
Query: 5 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPD----------KCAILQETVNQCL 54
N KR+ + +++ SF ESM + P + + +E +Q
Sbjct: 36 NRKRKGSSTDYQLDDF-------SFEESMDTDKDDPHGRLEYTEHQGRIRMFREAHSQI- 87
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++
Sbjct: 88 -EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------ 134
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
A ++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ ++
Sbjct: 135 ATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDL 194
Query: 174 LGKSVYNLIHHGDHAR 189
+G+S+++ +H D A+
Sbjct: 195 IGQSLFDYLHPKDIAK 210
>gi|72256329|gb|AAZ67070.1| Arnt1c [Danio rerio]
Length = 728
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 27/187 (14%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ A S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 72 ERRRRNKMTAYITELSDMVPACS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 125
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLFVV+ + G V + ++++ + ++ +
Sbjct: 126 G-------TYKPSFLTDQELKHLILEAADGFLFVVSCETGRVVYVSDSVTPVLNQAQSDW 178
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAW---------TSDSGGQAGKRPSLTASTPN 224
LG S+Y+ +H D + L + + N+ GGQA R S+ A
Sbjct: 179 LGSSLYDQLHPDDVEKLREQLSTTENNNNSGRMLDMKTGTVKKEGGQATVRMSMGA---R 235
Query: 225 RTFNIRL 231
R+F R+
Sbjct: 236 RSFICRM 242
>gi|355669546|gb|AER94563.1| aryl hydrocarbon receptor nuclear translocator-like protein
[Mustela putorius furo]
Length = 268
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 68 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 115
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 116 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDYLHPKDIAK 190
>gi|324512287|gb|ADY45095.1| Aryl hydrocarbon receptor nuclear translocator [Ascaris suum]
Length = 461
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 13/148 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + +L KPDK IL+ V+ ++ I+
Sbjct: 59 ERRRRNKMTHYINELAEMVPQCA------ALGRKPDKLTILRMAVSHMKAIR------GT 106
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
Q G +S KP+ +T++ L L+LEA GFLFVV D G V + ++I + +++ L
Sbjct: 107 SQTGTEASYKPSFLTDQELKHLILEAANGFLFVVCCDTGRVLYVADSIVPVLNVRQEDWL 166
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+Y LIH D + + L S +N
Sbjct: 167 HHPIYELIHPDDMEKVRDQLCGSDASLN 194
>gi|374279664|gb|AEZ04013.1| hypoxia-inducible factor beta, partial [Callinectes sapidus]
Length = 263
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 79/141 (56%), Gaps = 11/141 (7%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE 110
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++ E
Sbjct: 2 NHCEIERRRRNKMTAYIAELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGME 55
Query: 111 -TSSDAVQQGEVSSS---KPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSF 165
T+ + G ++ KP+ +T++ L L+LEA +GFLFVV D G + + ++++
Sbjct: 56 VTNGSGMGTGNTNADGTYKPSFLTDQELKHLILEAADGFLFVVACDTGRIIYASDSVTPV 115
Query: 166 IRYSRQEVLGKSVYNLIHHGD 186
+ + + G SVY+ +H D
Sbjct: 116 LNQPQSDWFGSSVYDHVHPED 136
>gi|306518492|dbj|BAJ17132.1| aryl hydrocarbon receptor nuclear translocator [Ascaris suum]
Length = 436
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 13/148 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + +L KPDK IL+ V+ ++ I+
Sbjct: 31 ERRRRNKMTHYINELAEMVPQCA------ALGRKPDKLTILRMAVSHMKAIR------GT 78
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
Q G +S KP+ +T++ L L+LEA GFLFVV D G V + ++I + +++ L
Sbjct: 79 SQTGTEASYKPSFLTDQELKHLILEAANGFLFVVCCDTGRVLYVADSIVPVLNVRQEDWL 138
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+Y LIH D + + L S +N
Sbjct: 139 HHPIYELIHPDDMEKVRDQLCGSDASLN 166
>gi|431919652|gb|ELK18040.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Pteropus alecto]
Length = 454
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 111 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 158
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 159 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 218
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 219 GQSLFDYLHPKDIAK 233
>gi|350580290|ref|XP_003480782.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Sus scrofa]
Length = 329
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 88 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 136 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 195
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 196 GQSLFDYLHPKDIAK 210
>gi|47563646|dbj|BAD20455.1| clock type A [Hyla japonica]
Length = 332
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 79/145 (54%), Gaps = 11/145 (7%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 28 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 78
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
SDA + + KP ++NE L+LEAL+GF V DG + + +E++ + +
Sbjct: 79 SAQSDASEIRQ--DWKPAFLSNEEFTQLMLEALDGFFLAVTTDGNIIYVSESVTPLLEHL 136
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 137 PSDLVDQSIFNFIPEGEHSEIYKIL 161
>gi|443691097|gb|ELT93058.1| hypothetical protein CAPTEDRAFT_104448, partial [Capitella teleta]
Length = 149
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 79/144 (54%), Gaps = 15/144 (10%)
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSDAVQ 117
RR + +Y+ EL +++ A S +LA KPDK IL+ V +++++ T+SD
Sbjct: 1 RRSKMASYVNELCDMVPACS------TLARKPDKLTILRLAVAHMKSLQGTGNTASD--- 51
Query: 118 QGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGK 176
+S KP+ +T++ L L+LEA +GFLFV D G + + +++I + S+ E G
Sbjct: 52 ----TSYKPSFLTDQELKHLILEAADGFLFVAQSDTGRIIYVSDSITPVLNQSQSEWFGN 107
Query: 177 SVYNLIHHGDHARFHNCLVPSSHQ 200
S+Y+LIH D + L S Q
Sbjct: 108 SLYDLIHQDDVDKLREQLSTSESQ 131
>gi|432863560|ref|XP_004070127.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Oryzias latipes]
Length = 637
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 80/132 (60%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N I++L+ +I + ++ K DK +L+ V ++++K SS++
Sbjct: 102 EKRRRDKMNTLIDKLSAMIPTCN------PMSRKLDKLTVLRMAVQHLKSLK---GSSNS 152
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ +S KP+ + +E L L+L+A +GFLFVV D G + F +E+I + YSR E++
Sbjct: 153 FSE---ASCKPSFLPDEELKHLVLKAADGFLFVVGCDRGKIIFVSESITKILNYSRTELI 209
Query: 175 GKSVYNLIHHGD 186
G+S+++ IH D
Sbjct: 210 GQSLFDYIHPKD 221
>gi|49532660|dbj|BAD26599.1| BMAL1b' [Mus musculus]
Length = 633
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 28/194 (14%)
Query: 5 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLN--------E 56
N KR+ + +++ A F ESM + P E + N E
Sbjct: 36 NRKRKGSATDYQLDDFA-------FEESMDTDKDDPHGRLEYAEHQGRIKNAREAHSQIE 88
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 89 KRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------AT 136
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLG 175
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++G
Sbjct: 137 NPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIG 196
Query: 176 KSVYNLIHHGDHAR 189
+S+++ +H D A+
Sbjct: 197 QSLFDYLHPKDIAK 210
>gi|47563648|dbj|BAD20456.1| clock type B [Hyla japonica]
Length = 265
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 28 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDYLRKHKEI 78
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KP ++NE L+LEAL+GF V DG + + +E++ + +
Sbjct: 79 SAQSDA---SEIRQDWKPAFLSNEEFTQLMLEALDGFFLAVMTDGNIIYVSESVTPLLEH 135
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N I G+H+ + L
Sbjct: 136 LPSDLVDQSIFNFIPEGEHSEIYKIL 161
>gi|149068248|gb|EDM17800.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_a
[Rattus norvegicus]
Length = 633
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 28/194 (14%)
Query: 5 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLN--------E 56
N KR+ + +++ A F ESM + P E + N E
Sbjct: 36 NRKRKGSATDYQLDDFA-------FEESMDTDKDDPHGRLEYAEHQGRIKNAREAHSQIE 88
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 89 KRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------AT 136
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLG 175
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++G
Sbjct: 137 NPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIG 196
Query: 176 KSVYNLIHHGDHAR 189
+S+++ +H D A+
Sbjct: 197 QSLFDYLHPKDIAK 210
>gi|71896600|ref|NP_077338.2| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Rattus norvegicus]
gi|71681125|gb|AAH99833.1| Aryl hydrocarbon receptor nuclear translocator-like [Rattus
norvegicus]
gi|149068249|gb|EDM17801.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Rattus norvegicus]
gi|149068250|gb|EDM17802.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Rattus norvegicus]
Length = 626
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|344280870|ref|XP_003412205.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Loxodonta africana]
Length = 662
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 212 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLR------GA 259
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 260 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 319
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 320 GQSLFDYLHPKDIAK 334
>gi|31322527|gb|AAP15169.1| bHLH/PAS domain protein Bmal1 [Arvicanthis ansorgei]
Length = 181
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + S+++ K DK +L+ V ++ ++ A
Sbjct: 56 EKRRRDKMNSFIDELASLVP------TCSAMSRKLDKLTVLRMAVQHMKTLRG------A 103
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 104 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 163
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 164 GQSLFDYLHPKDIAK 178
>gi|34098759|sp|Q9WTL8.2|BMAL1_MOUSE RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Arnt3; AltName: Full=Brain and
muscle ARNT-like 1
gi|148685096|gb|EDL17043.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_c
[Mus musculus]
Length = 632
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 28/194 (14%)
Query: 5 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLN--------E 56
N KR+ + +++ A F ESM + P E + N E
Sbjct: 36 NRKRKGSATDYQLDDFA-------FEESMDTDKDDPHGRLEYAEHQGRIKNAREAHSQIE 88
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 89 KRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------AT 136
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLG 175
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++G
Sbjct: 137 NPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIG 196
Query: 176 KSVYNLIHHGDHAR 189
+S+++ +H D A+
Sbjct: 197 QSLFDYLHPKDIAK 210
>gi|81916240|sp|Q91YA9.1|BMAL1_SPAGA RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|16549046|emb|CAC85406.1| MOP3 protein [Spalax galili]
Length = 626
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|6680732|ref|NP_031515.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform 1 [Mus musculus]
gi|3402483|dbj|BAA32208.1| Arnt3 [Mus musculus]
gi|19683934|gb|AAH25973.1| Aryl hydrocarbon receptor nuclear translocator-like [Mus musculus]
gi|74144664|dbj|BAE27317.1| unnamed protein product [Mus musculus]
gi|74151184|dbj|BAE27714.1| unnamed protein product [Mus musculus]
gi|148685095|gb|EDL17042.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Mus musculus]
Length = 626
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|49532661|dbj|BAD26600.1| BMAL1b [Mus musculus]
Length = 626
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|149068251|gb|EDM17803.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_c
[Rattus norvegicus]
Length = 613
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 68 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 115
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 116 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDYLHPKDIAK 190
>gi|281350883|gb|EFB26467.1| hypothetical protein PANDA_015776 [Ailuropoda melanoleuca]
Length = 627
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|340007432|ref|NP_001229977.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform 2 [Mus musculus]
gi|15029728|gb|AAH11080.1| Arntl protein [Mus musculus]
gi|148685094|gb|EDL17041.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_a
[Mus musculus]
Length = 613
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 68 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 115
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 116 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDYLHPKDIAK 190
>gi|301781486|ref|XP_002926157.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Ailuropoda melanoleuca]
Length = 625
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|1695803|gb|AAC51213.1| MOP3 [Homo sapiens]
Length = 624
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 79 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLR------GA 126
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 127 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDYLHPKDIAK 201
>gi|4586558|dbj|BAA76414.1| BMAL1b' [Mus musculus]
Length = 632
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 28/194 (14%)
Query: 5 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLN--------E 56
N KR+ + +++ A F ESM + P E + N E
Sbjct: 36 NRKRKGSATDYQLDDFA-------FEESMDTDKDDPHGRLEYAEHQGRIKNAREAHSQIE 88
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 89 KRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------AT 136
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLG 175
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++G
Sbjct: 137 NPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIG 196
Query: 176 KSVYNLIHHGDHAR 189
+S+++ +H D A+
Sbjct: 197 QSLFDYLHPKDIAK 210
>gi|5360228|dbj|BAA81898.1| BMAL1b [Mus musculus]
Length = 625
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|34098389|sp|O88529.1|BMAL1_MESAU RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|3228689|gb|AAC23606.1| bHLH-PAS transcription factor [Mesocricetus auratus]
Length = 626
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|441646084|ref|XP_003255011.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 4 [Nomascus leucogenys]
Length = 613
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 68 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 115
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 116 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDYLHPKDIAK 190
>gi|189054791|dbj|BAG37615.1| unnamed protein product [Homo sapiens]
Length = 626
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|345787824|ref|XP_851850.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
isoform 2 [Canis lupus familiaris]
Length = 626
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|119588915|gb|EAW68509.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_g
[Homo sapiens]
Length = 614
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 68 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 115
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 116 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDYLHPKDIAK 190
>gi|441646078|ref|XP_003255009.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Nomascus leucogenys]
Length = 625
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|410973229|ref|XP_003993057.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Felis catus]
Length = 633
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 28/194 (14%)
Query: 5 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLN--------E 56
N KR+ + +++ SF ESM + P E + N E
Sbjct: 36 NRKRKGSSTDYQLDDF-------SFEESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIE 88
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 89 KRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------AT 136
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLG 175
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++G
Sbjct: 137 NPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIG 196
Query: 176 KSVYNLIHHGDHAR 189
+S+++ +H D A+
Sbjct: 197 QSLFDYLHPKDIAK 210
>gi|395543494|ref|XP_003773652.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Sarcophilus harrisii]
Length = 633
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 88 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 136 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 195
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 196 GQSLFDYLHPKDIAK 210
>gi|354503574|ref|XP_003513856.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like, partial [Cricetulus griseus]
Length = 539
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLR------GA 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|440913142|gb|ELR62630.1| hypothetical protein M91_01346 [Bos grunniens mutus]
Length = 644
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|397494733|ref|XP_003818226.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Pan paniscus]
gi|410044850|ref|XP_003951889.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|426367512|ref|XP_004050775.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Gorilla gorilla gorilla]
Length = 633
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 88 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 136 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 195
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 196 GQSLFDYLHPKDIAK 210
>gi|390470249|ref|XP_003734263.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Callithrix jacchus]
Length = 633
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 88 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 136 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 195
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 196 GQSLFDYLHPKDIAK 210
>gi|119588918|gb|EAW68512.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_i
[Homo sapiens]
Length = 627
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|410973227|ref|XP_003993056.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Felis catus]
Length = 613
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 68 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 115
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 116 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDYLHPKDIAK 190
>gi|410044848|ref|XP_003951888.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
Length = 613
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 68 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 115
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 116 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDYLHPKDIAK 190
>gi|348559902|ref|XP_003465754.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 1 [Cavia porcellus]
Length = 626
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|397494731|ref|XP_003818225.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Pan paniscus]
gi|410044844|ref|XP_001171687.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
isoform 3 [Pan troglodytes]
gi|33860123|sp|O00327.2|BMAL1_HUMAN RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Basic-helix-loop-helix-PAS
protein MOP3; AltName: Full=Brain and muscle ARNT-like
1; AltName: Full=Class E basic helix-loop-helix protein
5; Short=bHLHe5; AltName: Full=Member of PAS protein 3;
AltName: Full=PAS domain-containing protein 3; AltName:
Full=bHLH-PAS protein JAP3
gi|1698576|gb|AAB37248.1| bHLH-PAS protein JAP3 [Homo sapiens]
gi|3170267|gb|AAC24353.1| basic-helix-loop-helix-PAS orphan MOP3 [Homo sapiens]
gi|119588910|gb|EAW68504.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Homo sapiens]
gi|119588916|gb|EAW68510.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_b
[Homo sapiens]
gi|158256452|dbj|BAF84199.1| unnamed protein product [Homo sapiens]
gi|261858376|dbj|BAI45710.1| aryl hydrocarbon receptor nuclear translocator-like [synthetic
construct]
gi|410222708|gb|JAA08573.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410222712|gb|JAA08575.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410253944|gb|JAA14939.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410253948|gb|JAA14941.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410301876|gb|JAA29538.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410301878|gb|JAA29539.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410335571|gb|JAA36732.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410335575|gb|JAA36734.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
Length = 626
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|395543498|ref|XP_003773654.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 4 [Sarcophilus harrisii]
Length = 613
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 68 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 115
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 116 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDYLHPKDIAK 190
>gi|348559906|ref|XP_003465756.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 3 [Cavia porcellus]
Length = 613
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 68 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 115
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 116 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDYLHPKDIAK 190
>gi|395543492|ref|XP_003773651.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Sarcophilus harrisii]
Length = 626
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|351714673|gb|EHB17592.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Heterocephalus glaber]
Length = 627
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|296217591|ref|XP_002755108.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Callithrix jacchus]
gi|390470247|ref|XP_003734262.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Callithrix jacchus]
Length = 626
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|383872274|ref|NP_001244766.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Macaca mulatta]
gi|355566711|gb|EHH23090.1| Brain and muscle ARNT-like 1 [Macaca mulatta]
gi|355752314|gb|EHH56434.1| Brain and muscle ARNT-like 1 [Macaca fascicularis]
gi|380812758|gb|AFE78253.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
gi|383418371|gb|AFH32399.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
gi|383418373|gb|AFH32400.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
Length = 626
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|426367514|ref|XP_004050776.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 4 [Gorilla gorilla gorilla]
Length = 624
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 79 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLR------GA 126
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 127 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDYLHPKDIAK 201
>gi|312372177|gb|EFR20193.1| hypothetical protein AND_20499 [Anopheles darlingi]
Length = 928
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I +++ K DK +L+ V ++ I+ A
Sbjct: 227 EKRRRDKMNTYITELSAMIPMCH------AMSRKLDKLTVLRMAVQHLKTIR------GA 274
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KP ++++ L L+L+A EGFLFVV D G + + +E++ + YS+ ++L
Sbjct: 275 VHSYTEGHYKPAFLSDQELKMLILQAAEGFLFVVGCDRGRILYVSESVSHVLNYSQGDLL 334
Query: 175 GKSVYNLIHHGDHAR 189
G+S ++++H D A+
Sbjct: 335 GQSWFDILHPKDVAK 349
>gi|300794072|ref|NP_001178099.1| aryl hydrocarbon receptor nuclear translocator-like protein 1 [Bos
taurus]
gi|296480174|tpg|DAA22289.1| TPA: aryl hydrocarbon receptor nuclear translocator-like [Bos
taurus]
Length = 626
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|239937484|ref|NP_001123206.1| aryl hydrocarbon receptor nuclear translocator-like protein 1 [Ovis
aries]
gi|152940833|gb|ABS44881.1| aryl hydrocarbon receptor nuclear translocator-like protein [Ovis
aries]
Length = 626
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|417403449|gb|JAA48528.1| Putative aryl-hydrocarbon receptor nuclear translocator [Desmodus
rotundus]
Length = 626
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|126352624|ref|NP_001075390.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Equus caballus]
gi|150385716|sp|A0MLS5.1|BMAL1_HORSE RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|116256287|gb|ABJ90473.1| brain and muscle ARNT-like protein 1 [Equus caballus]
Length = 626
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|42716311|ref|NP_001169.3| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Homo sapiens]
gi|71852580|ref|NP_001025443.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Homo sapiens]
gi|410044846|ref|XP_003951887.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|426367508|ref|XP_004050773.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Gorilla gorilla gorilla]
gi|37589937|gb|AAH41129.2| Aryl hydrocarbon receptor nuclear translocator-like [Homo sapiens]
gi|119588919|gb|EAW68513.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_j
[Homo sapiens]
gi|167773115|gb|ABZ91992.1| aryl hydrocarbon receptor nuclear translocator-like [synthetic
construct]
gi|325463663|gb|ADZ15602.1| aryl hydrocarbon receptor nuclear translocator-like [synthetic
construct]
Length = 625
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|410973225|ref|XP_003993055.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Felis catus]
Length = 625
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|384942802|gb|AFI35006.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
gi|384942804|gb|AFI35007.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform a [Macaca mulatta]
Length = 625
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|119588912|gb|EAW68506.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_d
[Homo sapiens]
Length = 470
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 13/140 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGDHARFHNCL 194
G+S+++ +H D A+ L
Sbjct: 146 GQSLFDYLHPKDIAKVKEQL 165
>gi|119588909|gb|EAW68503.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_a
[Homo sapiens]
Length = 625
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 79 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLR------GA 126
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 127 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDYLHPKDIAK 201
>gi|158294552|ref|XP_556301.3| AGAP005655-PA [Anopheles gambiae str. PEST]
gi|157015616|gb|EAL39880.3| AGAP005655-PA [Anopheles gambiae str. PEST]
Length = 642
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I +++ K DK +L+ V ++ I+ A
Sbjct: 56 EKRRRDKMNTYITELSAMIPMCH------AMSRKLDKLTVLRMAVQHLKTIR------GA 103
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KP ++++ L L+L+A EGFLFVV D G + + +E++ + YS+ ++L
Sbjct: 104 VHSYTEGHYKPAFLSDQELKMLILQAAEGFLFVVGCDRGRILYVSESVSHILNYSQGDLL 163
Query: 175 GKSVYNLIHHGDHAR 189
G+S ++++H D A+
Sbjct: 164 GQSWFDILHPKDVAK 178
>gi|126332169|ref|XP_001367705.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Monodelphis domestica]
Length = 626
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|403254270|ref|XP_003919896.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Saimiri boliviensis boliviensis]
Length = 625
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|443687040|gb|ELT90146.1| hypothetical protein CAPTEDRAFT_141966, partial [Capitella teleta]
Length = 187
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 82/143 (57%), Gaps = 13/143 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ L+ ++ K DK +L+ V ++ +K A
Sbjct: 8 EKRRRDKMNTYITELSSLVPMCC------AMNRKHDKLTVLRLAVQHMKTLK------GA 55
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V S KP+ +++E L L+L++ GFLFVV+ D G + + +E++KS +++ + E++
Sbjct: 56 VDAHTEVSHKPSFLSDEELKHLILQSAGGFLFVVSCDRGRILYVSESVKSVLQFRQPELI 115
Query: 175 GKSVYNLIHHGDHARFHNCLVPS 197
G+S+++ IH D ++ L+ S
Sbjct: 116 GQSLFDFIHPKDVSKVKEQLLSS 138
>gi|348503838|ref|XP_003439469.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Oreochromis niloticus]
Length = 620
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 82 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 129
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP+ ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 130 ANPYTEANYKPSFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVYKILNYSQNDLI 189
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 190 GQSLFDYLHPKDIAK 204
>gi|2094741|dbj|BAA19938.1| BMAL1e [Homo sapiens]
Length = 258
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 146 GQSLFDYLHPKDIAK 160
>gi|119588913|gb|EAW68507.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_e
[Homo sapiens]
Length = 483
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLR------GA 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 146 GQSLFDYLHPKDIAK 160
>gi|115349961|gb|ABI95426.1| brain and muscle ARNT-like 1 protein [Haplochromis burtoni]
Length = 620
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 82 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 129
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP+ ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 130 ANPYTEANYKPSFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVYKILNYSQNDLI 189
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 190 GQSLFDYLHPKDIAK 204
>gi|345787826|ref|XP_003432972.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Canis lupus familiaris]
Length = 583
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 146 GQSLFDYLHPKDIAK 160
>gi|410907313|ref|XP_003967136.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Takifugu rubripes]
Length = 638
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 100 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 147
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP+ ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 148 ANPYTEANYKPSFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVYKILNYSQNDLI 207
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 208 GQSLFDYLHPKDIAK 222
>gi|395543496|ref|XP_003773653.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Sarcophilus harrisii]
Length = 583
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 146 GQSLFDYLHPKDIAK 160
>gi|391328040|ref|XP_003738501.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator homolog [Metaseiulus occidentalis]
Length = 729
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V +++++ TSSD
Sbjct: 117 ERRRRNKMTAYITELSDMV------PTCSALARKPDKLTILRMAVAHMKSLRGTGNTSSD 170
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + +S+ +
Sbjct: 171 GTY-------KPSFLTDQELKHLILEAADGFLFVVSCDTGRVVYVSDSVGPVLSHSQSDW 223
Query: 174 LGKSVYNLIHHGD 186
+Y+L+H D
Sbjct: 224 FNACLYDLVHPDD 236
>gi|134024857|gb|AAI34896.1| Arntl1b protein [Danio rerio]
Length = 645
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 106 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 153
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L+A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 154 ANPYTEANYKPAFLSDDELKHLILKAADGFLFVVGCDRGKILFVSESVYKILNYSQNDLI 213
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 214 GQSLFDYLHPKDIAK 228
>gi|427794165|gb|JAA62534.1| Putative tango, partial [Rhipicephalus pulchellus]
Length = 700
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V +++++ TSSD
Sbjct: 162 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKSLRGTGNTSSD 215
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + S+ E
Sbjct: 216 G-------TYKPSFLTDQELKHLILEAADGFLFVVSCDTGRVIYVSDSVGPVLNQSQSEW 268
Query: 174 LGKSVYNLIHHGD 186
+Y+LIH D
Sbjct: 269 FNACLYDLIHPED 281
>gi|3668183|dbj|BAA33450.1| BMAL1b [Rattus norvegicus]
Length = 626
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTSLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|84993187|emb|CAJ43766.1| aryl hydrocarbon receptor nuclear transloctor-like protein 1
[Microtus arvalis]
Length = 212
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 59 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 106
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 107 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 166
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 167 GQSLFDYLHPKDIAK 181
>gi|2104216|dbj|BAA19968.1| BMAL1a [Homo sapiens]
gi|71052191|gb|AAH31214.1| Aryl hydrocarbon receptor nuclear translocator-like [Homo sapiens]
gi|112180372|gb|AAH16674.1| Aryl hydrocarbon receptor nuclear translocator-like [Homo sapiens]
gi|119588917|gb|EAW68511.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_h
[Homo sapiens]
gi|410222710|gb|JAA08574.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410253946|gb|JAA14940.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410301880|gb|JAA29540.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
gi|410335573|gb|JAA36733.1| aryl hydrocarbon receptor nuclear translocator-like [Pan
troglodytes]
Length = 583
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 146 GQSLFDYLHPKDIAK 160
>gi|18857917|dbj|BAB85474.1| CYCLE [Sarcophaga crassipalpis]
Length = 121
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 13/133 (9%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KRRR++ N YI EL+ +I ++ K DK +L+ V +R+I+ AV
Sbjct: 1 KRRRDKTNTYINELSSMIPMCY------AMHRKLDKLTVLRMAVQHLRSIR------GAV 48
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLG 175
KPT ++++ L L+L+A EGFLFVV D G + + +E++ + + Y++ ++LG
Sbjct: 49 HAYSGGDCKPTFLSDQELKMLILQAAEGFLFVVGCDRGRILYVSESVSNVLNYTQTDLLG 108
Query: 176 KSVYNLIHHGDHA 188
+S ++++H D A
Sbjct: 109 QSWFDVLHPKDVA 121
>gi|390136659|pdb|4F3L|B Chain B, Crystal Structure Of The Heterodimeric Clock:bmal1
Transcriptional Activator Complex
Length = 387
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 21 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLR------GA 68
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 69 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 128
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 129 GQSLFDYLHPKDIAK 143
>gi|109689230|dbj|BAE96769.1| arylhydrocarbon receptor nuclear translocator homolog b isoform
[Anopheles stephensi]
Length = 740
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 32 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 85
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
T++D S KP+ +T++ L L+LEA +GFLFV D G + + ++++ + Y
Sbjct: 86 NTNTDG-------SYKPSFLTDQELKHLILEAADGFLFVAGCDTGRIIYVSDSVTPVLNY 138
Query: 169 SRQEVLGKSVYNLIHHGD 186
S+ E S+++ IH D
Sbjct: 139 SQNEWYSGSLFDHIHPDD 156
>gi|268566993|ref|XP_002639864.1| C. briggsae CBR-AHA-1 protein [Caenorhabditis briggsae]
Length = 450
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 24/188 (12%)
Query: 26 AASFAESMSSLAVKPDKCAILQETV----------NQCLNEKRRREQENNYIEELAELIS 75
+A+F + + P K A +++ + N E+RRR + +YI ELAE++
Sbjct: 12 SANFPMEDEEMGMPPGKYARMEDDMGENKERFARENHSEIERRRRNKMTHYINELAEMVP 71
Query: 76 AASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLG 135
+ SL KPDK IL+ V+ ++ I+ + +S KP+ +T++ L
Sbjct: 72 QCA------SLGRKPDKLTILRMAVSHMKGIRGHSAQDE-------TSYKPSFLTDQELK 118
Query: 136 PLLLEALEGFLFVV-NPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCL 194
L+LEA GFLFVV G V + ++I + +++ L +++ +LIH D + + L
Sbjct: 119 HLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWLQRNLNDLIHPDDQDKIRDQL 178
Query: 195 VPSSHQVN 202
S VN
Sbjct: 179 CGSEVSVN 186
>gi|146345378|sp|Q9EPW1.4|BMAL1_RAT RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1;
AltName: Full=Tic
Length = 626
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTSLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|71852582|ref|NP_001025444.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
isoform b [Homo sapiens]
gi|426367510|ref|XP_004050774.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Gorilla gorilla gorilla]
gi|119588911|gb|EAW68505.1| aryl hydrocarbon receptor nuclear translocator-like, isoform CRA_c
[Homo sapiens]
gi|121646995|gb|ABM64205.1| aryl hydrocarbon receptor nuclear translocator-like [Homo sapiens]
gi|193788226|dbj|BAG53120.1| unnamed protein product [Homo sapiens]
Length = 582
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 146 GQSLFDYLHPKDIAK 160
>gi|403254272|ref|XP_003919897.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Saimiri boliviensis boliviensis]
Length = 582
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 146 GQSLFDYLHPKDIAK 160
>gi|47209832|emb|CAF94040.1| unnamed protein product [Tetraodon nigroviridis]
Length = 677
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP+ ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 ANPYTEANYKPSFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVYKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|410973231|ref|XP_003993058.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 4 [Felis catus]
Length = 582
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 146 GQSLFDYLHPKDIAK 160
>gi|348559904|ref|XP_003465755.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 2 [Cavia porcellus]
Length = 582
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 146 GQSLFDYLHPKDIAK 160
>gi|109689228|dbj|BAE96768.1| arylhydrocarbon receptor nuclear translocator homolog a isoform
[Anopheles stephensi]
Length = 725
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
T++D S KP+ +T++ L L+LEA +GFLFV D G + + ++++ + Y
Sbjct: 71 NTNTDG-------SYKPSFLTDQELKHLILEAADGFLFVAGCDTGRIIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGD 186
S+ E S+++ IH D
Sbjct: 124 SQNEWYSGSLFDHIHPDD 141
>gi|242021051|ref|XP_002430960.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516180|gb|EEB18222.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 671
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ S +LA KPDK IL+ V ++ ++
Sbjct: 75 NHCEIERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVAHMKALRGTG 128
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD + KP+ +T++ L L+LEA +GFLFVV D G + + ++++ +
Sbjct: 129 NTSSDG-------TYKPSFLTDQELKHLILEAADGFLFVVTCDTGRIIYVSDSVTPVLNQ 181
Query: 169 SRQEVLGKSVYNLIHHGD 186
S+ + G +Y+ +H D
Sbjct: 182 SQNDWFGSCIYDNVHSED 199
>gi|170058673|ref|XP_001865023.1| circadian protein clock/arnt/bmal/pas [Culex quinquefasciatus]
gi|167877699|gb|EDS41082.1| circadian protein clock/arnt/bmal/pas [Culex quinquefasciatus]
Length = 784
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I +++ K DK +L+ V ++ I+ A
Sbjct: 193 EKRRRDKMNTYITELSAMIPMCH------AMSRKLDKLTVLRMAVQHLKTIR------GA 240
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KP ++++ L L+L+A EGFLFVV D G + + +E++ + YS+ ++L
Sbjct: 241 VHSYTEGHYKPAFLSDQELKMLILQAAEGFLFVVGCDRGRILYVSESVSQILNYSQGDLL 300
Query: 175 GKSVYNLIHHGDHAR 189
G+S ++++H D A+
Sbjct: 301 GQSWFDILHPKDVAK 315
>gi|444730401|gb|ELW70787.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Tupaia chinensis]
Length = 571
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 76 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 123
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 124 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 183
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 184 GQSLFDYLHPKDIAK 198
>gi|148229316|ref|NP_001089024.1| aryl hydrocarbon receptor nuclear translocator-like [Xenopus
laevis]
gi|50603758|gb|AAH78042.1| ARNTL protein [Xenopus laevis]
Length = 627
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 92/170 (54%), Gaps = 23/170 (13%)
Query: 29 FAESMSSLAVKPDKCAILQETVNQCLN--------EKRRREQENNYIEELAELISAASFA 80
F E M + K D +L+ T + N EKRRR++ N++I+ELA L+ +
Sbjct: 53 FDEGMDT--DKDDPHGLLEFTEGRLRNAREAHSQIEKRRRDKMNSFIDELASLVPTCN-- 108
Query: 81 ESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+++ K DK +L+ V ++ ++ A ++ KP+ ++++ L L+L
Sbjct: 109 ----AMSRKLDKLTVLRMAVQHMKTLRG------ATNPYTEANYKPSFLSDDELKQLILR 158
Query: 141 ALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHAR 189
A +GFLFVV D G + F +E++ + YS+ +++G+S+++ +H D A+
Sbjct: 159 AADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAK 208
>gi|410919123|ref|XP_003973034.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Takifugu rubripes]
Length = 538
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 17/182 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N IEEL+ +I A +A K DK +L++ V + +K +S+
Sbjct: 14 EKRRRDKMNTLIEELSAMIPACQH------MARKLDKLTVLRKAVQHLNGLKAGSSST-- 65
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+P+++ ++ L LLL A +GFL VV+ D G + F +E++ + +S E+
Sbjct: 66 ---FPHPPHRPSILPHDELRQLLLRAADGFLLVVSCDRGKILFISESVSKILNFSPLELT 122
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGG-----QAGKRPSLTASTPNRTFNI 229
G+S+++ IH D ++ L S + + G A RPS+ + R F
Sbjct: 123 GQSLFDFIHPKDISKVKEQLASSELHNHRLADAAAGVPVQADAPLRPSVLTTGARRAFFC 182
Query: 230 RL 231
R+
Sbjct: 183 RM 184
>gi|156368041|ref|XP_001627505.1| predicted protein [Nematostella vectensis]
gi|156214417|gb|EDO35405.1| predicted protein [Nematostella vectensis]
Length = 747
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 28 SFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLA 87
SF + + +P K + T N+ +EKRRR++ N YI ELA ++ + S
Sbjct: 110 SFNQEEKDVKEEPVKVTRRRTTRNE--SEKRRRDKLNVYITELAAMVPMCA------SSR 161
Query: 88 VKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLF 147
K DK +LQ VN ++ I T+S ++ V SS ++ + +G +L E + GFLF
Sbjct: 162 KKLDKTTVLQMAVNYMK-IHNDLTTSVLAKEPAVQSS---FLSGDEVGEILDECMNGFLF 217
Query: 148 VVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD 207
++ +G V F + N+ + ++EV+GK+ +LIH D N L V
Sbjct: 218 ALSSNGAVTFISRNVFQLFGHKQEEVIGKNFLDLIHPDDRNLVFNKLSEDPEPVIVHIDA 277
Query: 208 SGGQAGKRPSLTASTPNR-TFNIRL 231
S Q KR P + TF+I++
Sbjct: 278 SDFQPSKR------LPKKHTFDIQM 296
>gi|348506030|ref|XP_003440563.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Oreochromis niloticus]
Length = 620
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 80/140 (57%), Gaps = 13/140 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N I++L+ +I + + ++ K DK +L+ V ++++K +S
Sbjct: 84 EKRRRDKMNTLIDKLSAMIP------TCNPMSRKLDKLTVLRMAVQHLKSLKGSASSFSE 137
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP+ + +E L L+L+A +GFLFVV D G + F +E++ + YSR E++
Sbjct: 138 ------ANYKPSFLPDEELKHLVLKAADGFLFVVGCDRGKIVFVSESVTKILNYSRAELI 191
Query: 175 GKSVYNLIHHGDHARFHNCL 194
G+S+++ IH D + L
Sbjct: 192 GQSLFDYIHPKDMGKVKEQL 211
>gi|389614612|dbj|BAM20342.1| tango protein [Papilio polytes]
Length = 304
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 78/138 (56%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 56 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 109
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TS+D + KP+ +T++ L L+LEA +GFLFVV+ D G + + +++I + Y
Sbjct: 110 NTSTDG-------TYKPSFLTDQELKHLILEAADGFLFVVSCDTGRIIYVSDSIAPVLNY 162
Query: 169 SRQEVLGKSVYNLIHHGD 186
S+ E +++ +H D
Sbjct: 163 SQGEWYSSCLFDQVHPDD 180
>gi|395815284|ref|XP_003781161.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 3 [Otolemur garnettii]
Length = 632
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 21/172 (12%)
Query: 24 ISAASFAESMSSLAVKPDKCAILQETVNQCLN--------EKRRREQENNYIEELAELIS 75
+ SF ESM + P E + N EKRRR++ N++I+ELA L+
Sbjct: 48 LDGFSFEESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVP 107
Query: 76 AASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLG 135
+ +++ K DK +L+ V ++ ++ A ++ KPT ++++ L
Sbjct: 108 TCN------AMSRKLDKLTVLRMAVQHMKTLRG------ATNPYTEANYKPTFLSDDELK 155
Query: 136 PLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGD 186
L+L A +GFLFVV D G + F +E++ + YS+ +++G+S+++ +H D
Sbjct: 156 HLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKD 207
>gi|395815280|ref|XP_003781159.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Otolemur garnettii]
Length = 625
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 78/132 (59%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGD 186
G+S+++ +H D
Sbjct: 189 GQSLFDYLHPKD 200
>gi|148235012|ref|NP_001089031.1| uncharacterized protein LOC503673 [Xenopus laevis]
gi|50418074|gb|AAH77551.1| LOC503673 protein [Xenopus laevis]
Length = 627
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 86 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 133
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 134 ANPYTEANYKPAFLSDDELKQLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 193
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 194 GQSLFDYLHPKDIAK 208
>gi|392886940|ref|NP_001251327.1| Protein AHA-1, isoform a [Caenorhabditis elegans]
gi|74956399|sp|O02219.1|AHA1_CAEEL RecName: Full=Aryl hydrocarbon receptor nuclear translocator
homolog; Short=ARNT; AltName: Full=AHR-associated
protein
gi|3874439|emb|CAB02764.1| Protein AHA-1, isoform a [Caenorhabditis elegans]
Length = 453
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 24/189 (12%)
Query: 25 SAASFAESMSSLAVKPDKCAILQETV----------NQCLNEKRRREQENNYIEELAELI 74
SA SFA + + K A +++ + N E+RRR + +YI ELAE++
Sbjct: 12 SATSFAMEDEDMGMPSGKYARMEDEMGENKERFARENHSEIERRRRNKMTHYINELAEMV 71
Query: 75 SAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVL 134
+ SL KPDK IL+ V+ ++ I+ T+ D +S KP+ +T++ L
Sbjct: 72 PQCA------SLGRKPDKLTILRMAVSHMKGIRGH-TAQDE------TSYKPSFLTDQEL 118
Query: 135 GPLLLEALEGFLFVV-NPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNC 193
L+LEA GFLFVV G V + ++I + +++ L +++ LIH D + +
Sbjct: 119 KHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWLQRNLNELIHPDDQDKIRDQ 178
Query: 194 LVPSSHQVN 202
L S VN
Sbjct: 179 LCGSEVSVN 187
>gi|444245669|gb|AGD94516.1| clock, partial [Solenopsis invicta]
Length = 673
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL +ISA + K DK +L+ T+ ++N + S
Sbjct: 36 LSEKKRRDQFNMLVNELGSMISANT---------RKMDKSTVLKSTILFLKNHNEIAVRS 86
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
A + E KP+ ++NE L+LEAL+GF+ V + +G++ + +E++ S + Y E+
Sbjct: 87 RAHEIQE--DWKPSFLSNEEFTHLILEALDGFIMVFSSNGHIYYVSESVTSLLGYLPNEL 144
Query: 174 LGKSVYNLIHHGDHARFHNCLV 195
++Y++ + D +N L+
Sbjct: 145 ENTTIYDITYQEDQPHLYNALL 166
>gi|2094743|dbj|BAA19939.1| BMAL1d [Homo sapiens]
Length = 271
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVPESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 146 GQSLFDYLHPKDIAK 160
>gi|443697321|gb|ELT97837.1| hypothetical protein CAPTEDRAFT_180266 [Capitella teleta]
Length = 363
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 15/124 (12%)
Query: 65 NYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSDAVQQGEVSS 123
+YI EL +++ S +LA KPDK IL+ V+ ++N++ T+SD +S
Sbjct: 3 SYINELCDMVPTCS------TLARKPDKLTILRMAVSHMKNLRGTGNTASD-------TS 49
Query: 124 SKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLI 182
KP+ +T++ L L+LEA +GFLFV D G + + +++I + S+ E G S+Y+LI
Sbjct: 50 YKPSFLTDQELKHLILEAADGFLFVAQSDTGRIIYVSDSITPVLNQSQSEWFGNSLYDLI 109
Query: 183 HHGD 186
H D
Sbjct: 110 HQDD 113
>gi|392886938|ref|NP_001251326.1| Protein AHA-1, isoform b [Caenorhabditis elegans]
gi|2828112|gb|AAB99999.1| aryl hydrocarbon receptor nuclear translocator ortholog AHA-1
[Caenorhabditis elegans]
gi|262225515|emb|CBH29653.1| Protein AHA-1, isoform b [Caenorhabditis elegans]
Length = 451
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 24/189 (12%)
Query: 25 SAASFAESMSSLAVKPDKCAILQETV----------NQCLNEKRRREQENNYIEELAELI 74
SA SFA + + K A +++ + N E+RRR + +YI ELAE++
Sbjct: 12 SATSFAMEDEDMGMPSGKYARMEDEMGENKERFARENHSEIERRRRNKMTHYINELAEMV 71
Query: 75 SAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVL 134
+ SL KPDK IL+ V+ ++ I+ T+ D +S KP+ +T++ L
Sbjct: 72 PQCA------SLGRKPDKLTILRMAVSHMKGIRGH-TAQDE------TSYKPSFLTDQEL 118
Query: 135 GPLLLEALEGFLFVV-NPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNC 193
L+LEA GFLFVV G V + ++I + +++ L +++ LIH D + +
Sbjct: 119 KHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWLQRNLNELIHPDDQDKIRDQ 178
Query: 194 LVPSSHQVN 202
L S VN
Sbjct: 179 LCGSEVSVN 187
>gi|332021701|gb|EGI62057.1| Circadian locomoter output cycles protein kaput [Acromyrmex
echinatior]
Length = 699
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL ++SA A K DK +L+ T+ ++N + S
Sbjct: 56 LSEKKRRDQFNMLVNELGSMVSAN---------ARKMDKSTVLKSTILFLKNHNEIAVRS 106
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E KP+ ++NE L+LEAL+GF+ V + +G++ + +E++ S + Y E+
Sbjct: 107 RVHEIQE--DWKPSFLSNEEFTHLILEALDGFIMVFSSNGHIYYVSESVTSLLGYLPNEL 164
Query: 174 LGKSVYNLIHHGDHARFHNCLV 195
S+Y++ + D +N L+
Sbjct: 165 ENTSIYDITYQEDQPHLYNVLL 186
>gi|291290509|dbj|BAI82610.1| brain and muscle ARNT-like protein 1 [Xenopus (Silurana)
tropicalis]
Length = 615
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 79 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 126
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 127 ANPYTEANYKPAFLSDDELKQLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDYLHPKDIAK 201
>gi|406507549|gb|AFS34618.1| cycle, partial [Clunio marinus]
Length = 212
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN+I EL+ +I +++ K DK +L+ V ++ I+
Sbjct: 24 EKRRRDKMNNFITELSSMIPMCH------AMSRKLDKLTVLRMAVQHLKTIR------GT 71
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KP+ ++++ L L+L+A EGFLFVV D G + + +E++ + YS+ ++L
Sbjct: 72 VHSYTEGHYKPSFLSDQELKMLILQAAEGFLFVVGCDRGRILYVSESVSEVLNYSQGDLL 131
Query: 175 GKSVYNLIHHGDHARF 190
G+S ++++H D A+
Sbjct: 132 GQSWFDILHPKDVAKI 147
>gi|405962835|gb|EKC28478.1| Circadian locomoter output cycles protein kaput [Crassostrea gigas]
Length = 466
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 11/169 (6%)
Query: 30 AESMSSLAVKPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVK 89
+ES SL + D + VN+ L+EK+RR+Q N + EL ++S +S K
Sbjct: 15 SESEYSLGDEYDDDGKSSKRVNRNLSEKKRRDQFNMLVNELCSMVSTSS---------KK 65
Query: 90 PDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVV 149
DK +L+ T+ ++ QET+ A KP+ ++N+ L+LEAL+ L V
Sbjct: 66 MDKSTVLKSTIAYLKTY--QETAVQAQAHEIKEDWKPSFLSNDEFMHLMLEALDSCLLVF 123
Query: 150 NPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSS 198
G + + +E+I S + Y ++ +SVYN +H + +N L S
Sbjct: 124 TQQGNILYVSESITSLLGYLPADLTNQSVYNFMHENEKQNLYNILYHYS 172
>gi|395815282|ref|XP_003781160.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Otolemur garnettii]
Length = 582
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 78/132 (59%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGD 186
G+S+++ +H D
Sbjct: 146 GQSLFDYLHPKD 157
>gi|2094737|dbj|BAA19936.1| BMAL1c [Homo sapiens]
Length = 181
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 146 GQSLFDYLHPKDIAK 160
>gi|410912090|ref|XP_003969523.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator 2-like [Takifugu rubripes]
Length = 845
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 94/182 (51%), Gaps = 20/182 (10%)
Query: 8 RRREQENNYIEELAELISAAS-FAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENNY 66
+RR ++ EE E S S + + + DK ++E N E+RRR + Y
Sbjct: 44 KRRSGGMDFDEEDGEGPSKFSRYDDDNHTFGWGKDK--FVRE--NHSEIERRRRNKMTQY 99
Query: 67 IEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSDAVQQGEVSSSK 125
I EL++++ + S+LA KPDK IL+ V+ +++++ TS+D K
Sbjct: 100 ITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNTSTDGAY-------K 146
Query: 126 PTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHH 184
P+ +T + L L+LEA +GFLFVV + G V + ++++ + S+ E G S+Y +H
Sbjct: 147 PSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSLTPVLNQSQSEWFGSSLYEQVHP 206
Query: 185 GD 186
D
Sbjct: 207 DD 208
>gi|224052061|ref|XP_002187715.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 2 [Taeniopygia guttata]
Length = 633
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 88 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 136 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 195
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 196 GQSLFDYLHPKDIAK 210
>gi|432949737|ref|XP_004084233.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 1 [Oryzias latipes]
Length = 639
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 101 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 148
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 149 ANPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 208
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 209 GQSLFDYLHPKDIAK 223
>gi|269847456|ref|NP_001158488.1| aryl hydrocarbon receptor nuclear translocator-like [Saccoglossus
kowalevskii]
gi|197734681|gb|ACH73236.1| aryl hydrocarbon receptor nuclear translocator-like protein
[Saccoglossus kowalevskii]
Length = 652
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ-QETSSD 114
EKRRR++ N+YI EL+ ++ + +++ K DK +L+ V ++ +K TS D
Sbjct: 66 EKRRRDKMNSYITELSGMVPMCN------TMSRKLDKLTVLRMAVQHMKTVKGVTPTSKD 119
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S+ KP+ +++ L L+LEA EGFLFVV D G + + +E++ + +R+E+
Sbjct: 120 -------SNYKPSFLSDIELKHLILEAAEGFLFVVTCDRGKMLYLSESVNQILNINREEL 172
Query: 174 LGKSVYNLIHHGD 186
G S+++L+H D
Sbjct: 173 FGLSMFDLLHPKD 185
>gi|449504649|ref|XP_002187659.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1 isoform 1 [Taeniopygia guttata]
Length = 626
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|432949739|ref|XP_004084234.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 2 [Oryzias latipes]
Length = 622
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 84 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 131
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 132 ANPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 191
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 192 GQSLFDYLHPKDIAK 206
>gi|47825375|ref|NP_001001463.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Gallus gallus]
gi|82247579|sp|Q9I8T7.1|BMAL1_CHICK RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=BMAL1b'; AltName: Full=Brain
and muscle ARNT-like 1; Short=cBMAL1
gi|9651532|gb|AAF91179.1|AF205219_1 clock protein [Gallus gallus]
gi|19773558|gb|AAL98706.1|AF246957_1 BMAL1b' [Gallus gallus]
Length = 633
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 88 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 136 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 195
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 196 GQSLFDYLHPKDIAK 210
>gi|390346230|ref|XP_003726505.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
isoform 1 [Strongylocentrotus purpuratus]
Length = 747
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 76/132 (57%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S S+LA KPDK IL+ V+ +++++ +S
Sbjct: 41 ERRRRNKMTAYITELSDMV------PSCSALARKPDKLTILRMAVSHMKSLRGTGNTSTE 94
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T++ L L+LEA +GFLFV + G + + ++++ + + + +
Sbjct: 95 ------GTYKPSFLTDQELKHLILEAADGFLFVTSCESGRIIYVSDSVTPVLNQPQNDWI 148
Query: 175 GKSVYNLIHHGD 186
G SVY+L+H D
Sbjct: 149 GGSVYDLVHTDD 160
>gi|371534934|gb|AEX32872.1| cycle protein [Aedes aegypti]
Length = 744
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I +++ K DK +L+ V ++ I+ A
Sbjct: 125 EKRRRDKMNTYITELSAMIPMCH------AMSRKLDKLTVLRMAVQHLKTIR------GA 172
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KP ++++ L L+L+A EGFLFVV D G + + +E++ + YS+ ++L
Sbjct: 173 VHSYTEGHYKPAFLSDQELKMLILQAAEGFLFVVGCDRGRILYVSESVSQILNYSQGDLL 232
Query: 175 GKSVYNLIHHGDHAR 189
G+S ++++H D A+
Sbjct: 233 GQSWFDILHPKDVAK 247
>gi|38232198|gb|AAR14936.1| CLOCK [Antheraea pernyi]
Length = 611
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 11/141 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N I EL+ L+++ S K DK +L+ T++ +RN + S
Sbjct: 18 LSEKKRRDQFNLLINELSSLVTSNS---------RKMDKSTVLKSTISFLRNHNEITVRS 68
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
A KPT ++NE L+LEALEGF+ V + G +++ +E+I S + Y+ ++
Sbjct: 69 RA--HDIQDDWKPTFLSNEEFTYLVLEALEGFVVVFSTSGRIHYVSESISSLLGYNPVDI 126
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
+ KS++ L+ D ++ L
Sbjct: 127 INKSLFELVFEEDQQTLYSLL 147
>gi|118773282|gb|ABL14182.1| BMAL1 [Meleagris gallopavo]
Length = 296
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 70 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 117
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 118 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 177
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 178 GQSLFDYLHPKDIAK 192
>gi|449280889|gb|EMC88114.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Columba livia]
Length = 626
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|1695921|gb|AAC60051.1| aryl hydrocarbon receptor nuclear translocator protein isoform a
[Oncorhynchus mykiss]
Length = 636
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 79/133 (59%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ T++D
Sbjct: 74 ERRRRNKMTAYITELSDMV------PTCSALARKPDKLTILRMAVSHMKSLRGSGNTAAD 127
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLFVV+ G V + ++++ + S+ +
Sbjct: 128 G-------TYKPSFLTDQELKHLILEAADGFLFVVSCESGRVVYVSDSLTPVLNQSQSDW 180
Query: 174 LGKSVYNLIHHGD 186
LG S+Y+ +H D
Sbjct: 181 LGSSLYDQLHPDD 193
>gi|197099616|ref|NP_001126900.1| aryl hydrocarbon receptor nuclear translocator-like protein 1
[Pongo abelii]
gi|75070447|sp|Q5R4T2.1|BMAL1_PONAB RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|55733099|emb|CAH93234.1| hypothetical protein [Pongo abelii]
Length = 625
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E+ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESAFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|327278955|ref|XP_003224224.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 2 [Anolis carolinensis]
Length = 625
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 ANPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>gi|326919978|ref|XP_003206253.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Meleagris gallopavo]
Length = 633
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 88 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 136 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 195
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 196 GQSLFDYLHPKDIAK 210
>gi|82206301|sp|Q6YGZ5.1|BMAL1_TYTAL RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 1; AltName: Full=Brain and muscle ARNT-like 1
gi|37722551|gb|AAO06118.1| BMAL1 [Tyto alba]
Length = 633
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 88 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 136 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 195
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 196 GQSLFDYLHPKDIAK 210
>gi|157126329|ref|XP_001654597.1| circadian protein clock/arnt/bmal/pas [Aedes aegypti]
gi|108882569|gb|EAT46794.1| AAEL002049-PB, partial [Aedes aegypti]
Length = 647
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I +++ K DK +L+ V ++ I+ A
Sbjct: 38 EKRRRDKMNTYITELSAMIPMCH------AMSRKLDKLTVLRMAVQHLKTIR------GA 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KP ++++ L L+L+A EGFLFVV D G + + +E++ + YS+ ++L
Sbjct: 86 VHSYTEGHYKPAFLSDQELKMLILQAAEGFLFVVGCDRGRILYVSESVSQILNYSQGDLL 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S ++++H D A+
Sbjct: 146 GQSWFDILHPKDVAK 160
>gi|327278953|ref|XP_003224223.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like isoform 1 [Anolis carolinensis]
Length = 633
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 88 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLRG------A 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 136 ANPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 195
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 196 GQSLFDYLHPKDIAK 210
>gi|157126327|ref|XP_001654596.1| circadian protein clock/arnt/bmal/pas [Aedes aegypti]
gi|108882568|gb|EAT46793.1| AAEL002049-PA, partial [Aedes aegypti]
Length = 657
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I +++ K DK +L+ V ++ I+ A
Sbjct: 38 EKRRRDKMNTYITELSAMIPMCH------AMSRKLDKLTVLRMAVQHLKTIR------GA 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KP ++++ L L+L+A EGFLFVV D G + + +E++ + YS+ ++L
Sbjct: 86 VHSYTEGHYKPAFLSDQELKMLILQAAEGFLFVVGCDRGRILYVSESVSQILNYSQGDLL 145
Query: 175 GKSVYNLIHHGDHAR 189
G+S ++++H D A+
Sbjct: 146 GQSWFDILHPKDVAK 160
>gi|4191335|gb|AAD09750.1| aryl hydrocarbon receptor nuclear translocator 2 [Fundulus
heteroclitus]
Length = 715
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 71 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 124
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + + E
Sbjct: 125 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEW 177
Query: 174 LGKSVYNLIHHGD 186
LG ++Y +H D
Sbjct: 178 LGSTLYEQVHPDD 190
>gi|371534936|gb|AEX32873.1| tango protein [Aedes aegypti]
Length = 570
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMV------PTCSALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
T++D S KP+ +T++ L L+LEA +GFLFV D G + + ++++ + Y
Sbjct: 71 NTNTDG-------SYKPSFLTDQELKHLILEAADGFLFVAGCDTGRIIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGD 186
++ E S ++ IH D
Sbjct: 124 TQNEWYSGSFFDHIHPDD 141
>gi|305682538|dbj|BAJ16353.1| CLOCK [Thermobia domestica]
Length = 522
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N I EL+ ++S + K DK +L+ T+ ++N + S
Sbjct: 23 LSEKKRRDQFNMLINELSSMVSTTN---------RKMDKSTVLKSTIAFLKNHNEIAVRS 73
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
A + E KP+ ++NE L+LEAL+GF+ V G + + +E+I S + Y ++
Sbjct: 74 RAHEIQE--DWKPSFLSNEEFTHLILEALDGFIMVFASSGRILYASESITSLLGYLPSDL 131
Query: 174 LGKSVYNLIHHGDHARFHNCLV 195
L ++Y+L + D + ++ LV
Sbjct: 132 LNMTIYDLAYDDDRSELYSVLV 153
>gi|307168572|gb|EFN61630.1| Circadian locomoter output cycles protein kaput [Camponotus
floridanus]
Length = 702
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL +ISA + K DK +L+ T+ ++N + S
Sbjct: 18 LSEKKRRDQFNMLVNELGSMISANT---------RKMDKSTVLKSTILFLKNHNEIAVRS 68
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E + KP+ ++NE L+LEAL+GF+ V + +G + + +E+I S + Y E+
Sbjct: 69 RVHEIQE--NWKPSFLSNEEFTHLILEALDGFIIVFSSNGRIYYVSESITSLLGYLPNEL 126
Query: 174 LGKSVYNLIHHGDHARFHNCLV 195
++YN+ + D +N L+
Sbjct: 127 ENTTIYNITYQEDQPHLYNVLL 148
>gi|28279879|gb|AAH44135.1| Arntl1a protein [Danio rerio]
Length = 626
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 85 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + Y++ +++
Sbjct: 133 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVYKILNYTQNDLI 192
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 193 GQSLFDYLHPKDIAK 207
>gi|18858359|ref|NP_571652.1| aryl hydrocarbon receptor nuclear translocator-like 1a [Danio
rerio]
gi|7595268|gb|AAF64394.1|AF144689_1 Bmal1 [Danio rerio]
gi|7595270|gb|AAF64395.1|AF144690_1 Bmal1 [Danio rerio]
Length = 626
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +++ K DK +L+ V ++ ++ A
Sbjct: 85 EKRRRDKMNSFIDELASLVPTCN------AMSRKLDKLTVLRMAVQHMKTLRG------A 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + Y++ +++
Sbjct: 133 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVYKILNYTQNDLI 192
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 193 GQSLFDYLHPKDIAK 207
>gi|166998249|ref|NP_001107795.1| CYCLE [Tribolium castaneum]
gi|140270864|gb|ABO86538.1| CYCLE [Tribolium castaneum]
Length = 675
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 78/135 (57%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I +++ K DK +L+ V ++ I+ A
Sbjct: 125 EKRRRDKMNTYITELSAMIPMCH------AMSRKLDKLTVLRMAVQHLKTIR------GA 172
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KP+ ++++ L L+L+A +GFLFVV D G + + +E++ + +S+ ++L
Sbjct: 173 VHSYTEGHYKPSFLSDQELKHLILQAADGFLFVVGCDRGRILYVSESVSKVLNFSQGDLL 232
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++++H D A+
Sbjct: 233 GQSLFDILHPKDVAK 247
>gi|348526890|ref|XP_003450952.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Oreochromis niloticus]
Length = 731
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 82/141 (58%), Gaps = 15/141 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ T++D
Sbjct: 75 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGSGNTNAD 128
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLFVV+ + G + + ++++ + S+ +
Sbjct: 129 G-------SYKPSFLTDQELKHLILEAADGFLFVVSCETGRIVYVSDSLTPVLNQSQSDW 181
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
LG S+Y+ +H D + L
Sbjct: 182 LGSSLYDQLHPDDKDKLQEQL 202
>gi|19716305|gb|AAL95710.1|AF402781_1 aryl hydrocarbon receptor nuclear translocator 2 [Fundulus
heteroclitus]
Length = 731
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 87 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 140
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + + E
Sbjct: 141 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEW 193
Query: 174 LGKSVYNLIHHGD 186
LG ++Y +H D
Sbjct: 194 LGSTLYEQVHPDD 206
>gi|47221607|emb|CAF97872.1| unnamed protein product [Tetraodon nigroviridis]
Length = 679
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 96/184 (52%), Gaps = 28/184 (15%)
Query: 14 NNYIEELAELISA-ASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENNYIEELAE 72
NN E A L+ SFA DK + +E N E+RRR + YI EL++
Sbjct: 11 NNDKERFARLLDEDQSFA----------DKEKLARE--NHSEIERRRRNKMTAYITELSD 58
Query: 73 LISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITN 131
++ + S+LA KPDK IL+ V+ +++++ T+SD S KP+ +T+
Sbjct: 59 MVP------TCSALARKPDKLTILRMAVSHMKSLRGSGNTNSDG-------SYKPSFLTD 105
Query: 132 EVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
+ L L+LEA +GFLFVV+ + G + + ++++ + S+ + G S+Y+ +H D +
Sbjct: 106 QELKHLILEAADGFLFVVSCETGRIVYVSDSVTPVLNQSQSDWFGSSLYDQLHPDDTEKL 165
Query: 191 HNCL 194
L
Sbjct: 166 REQL 169
>gi|9581833|dbj|BAB03454.1| circadian clock protein CLOCK [Coturnix japonica]
Length = 854
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A M V P +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN--ARKM----VNP---TVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 173
>gi|341616318|gb|AEK86196.1| BMAL1, partial [Halichoeres trimaculatus]
Length = 376
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 27 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLR------GA 74
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP+ ++++ L L+L A +GFLFVV D G + F +E++ YS+ +++
Sbjct: 75 ANPYTEANYKPSFLSDDELKHLILRAADGFLFVVGCDRGKIPFVSESVYKIPNYSQNDLI 134
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 135 GQSLFDYLHPKDIAK 149
>gi|56754301|gb|AAW25338.1| SJCHGC05337 protein [Schistosoma japonicum]
Length = 302
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
+ C E+RRR + YI EL E++ S SLA KPDK IL+ V+ +++I+
Sbjct: 51 SHCEIERRRRNKMTAYINELCEMVPTCS------SLARKPDKLTILRMAVSHMKSIRGTG 104
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
T+SD S KP+ ++++ L L+LEA +GFLFV D G + + ++++ + +
Sbjct: 105 STTSDG-------SYKPSFLSDQELKHLVLEAADGFLFVCQCDTGRIIYVSDSVTAVLNQ 157
Query: 169 SRQEVLGKSVYNLIHHGD 186
++ E ++Y L H D
Sbjct: 158 TQSEWYQHTLYELCHPDD 175
>gi|87204425|gb|ABD32160.1| aryl hydrocarbon receptor nuclear translocator 1 [Micropogonias
undulatus]
Length = 537
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 84/148 (56%), Gaps = 17/148 (11%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK +E N E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 61 DKVRFARE--NHSEIERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 112
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ T++D S KP+ +T++ L L+LEA +GFLFVV+ + G V +
Sbjct: 113 SHMKSLRGSGNTNTDG-------SYKPSFLTDQELKHLILEAADGFLFVVSCETGRVVYV 165
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + ++ E LG S+Y+ +H D
Sbjct: 166 SDSLTPVLNQTQSEWLGSSLYDQLHPDD 193
>gi|270004808|gb|EFA01256.1| cycle protein [Tribolium castaneum]
Length = 480
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 78/135 (57%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I +++ K DK +L+ V ++ I+ A
Sbjct: 125 EKRRRDKMNTYITELSAMIPMCH------AMSRKLDKLTVLRMAVQHLKTIR------GA 172
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KP+ ++++ L L+L+A +GFLFVV D G + + +E++ + +S+ ++L
Sbjct: 173 VHSYTEGHYKPSFLSDQELKHLILQAADGFLFVVGCDRGRILYVSESVSKVLNFSQGDLL 232
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++++H D A+
Sbjct: 233 GQSLFDILHPKDVAK 247
>gi|308485342|ref|XP_003104870.1| CRE-AHA-1 protein [Caenorhabditis remanei]
gi|308257568|gb|EFP01521.1| CRE-AHA-1 protein [Caenorhabditis remanei]
Length = 451
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + SL KPDK IL+ V+ ++ I+ +
Sbjct: 52 ERRRRNKMTHYINELAEMVPQCA------SLGRKPDKLTILRMAVSHMKGIRGHSAQDE- 104
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVV-NPDGYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV G V + ++I + +++ L
Sbjct: 105 ------TSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWL 158
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+++ LIH D + + L S VN
Sbjct: 159 QRNLNELIHPDDQDKIRDQLCGSEVSVN 186
>gi|332220187|ref|XP_003259239.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 1
[Nomascus leucogenys]
Length = 846
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 155 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 208
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 209 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 261
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 262 FGSTLYDQVHPDD 274
>gi|148706868|gb|EDL38815.1| aryl hydrocarbon receptor nuclear translocator, isoform CRA_b [Mus
musculus]
Length = 704
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 128 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 181
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 182 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 234
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 235 FGSTLYDQVHPDD 247
>gi|410223188|gb|JAA08813.1| aryl hydrocarbon receptor nuclear translocator [Pan troglodytes]
Length = 789
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|332220189|ref|XP_003259240.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 2
[Nomascus leucogenys]
Length = 831
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 140 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 193
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 194 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 246
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 247 FGSTLYDQVHPDD 259
>gi|10945814|gb|AAG24646.1|AF193070_1 bHLH-PAS transcription factor BMAL1 [Gallus gallus]
Length = 127
Score = 71.6 bits (174), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + ++++ K DK +L+ V ++ ++ A
Sbjct: 2 EKRRRDKMNSFIDELASLVP------TCNAMSRKLDKLTVLRMAVQHMKTLR------GA 49
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 50 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 109
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 110 GQSLFDYLHPKDIAK 124
>gi|345313680|ref|XP_001517995.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like,
partial [Ornithorhynchus anatinus]
Length = 780
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 85 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSAD 138
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 139 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 191
Query: 174 LGKSVYNLIHHGD 186
G S+Y+ +H D
Sbjct: 192 FGSSLYDQVHPDD 204
>gi|410033660|ref|XP_001170422.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 1
[Pan troglodytes]
Length = 858
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 172 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 225
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 226 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 278
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 279 FGSTLYDQVHPDD 291
>gi|190338076|gb|AAI62682.1| Clock3 protein [Danio rerio]
Length = 820
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 17/148 (11%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ- 108
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ +R K+
Sbjct: 27 VSRNKSEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDYLRKNKEN 77
Query: 109 --QETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
Q SSD Q KP ++NE L+LEAL+GF V+ DGY+ + +E++ S +
Sbjct: 78 AAQSESSDIKQDW-----KPPFLSNEEFSQLMLEALDGFFLVMLTDGYIIYISESVTSLL 132
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCL 194
+ +++ +++ N + DH + L
Sbjct: 133 EHLPSDLMDQNLLNFLPVVDHGEVYKAL 160
>gi|239937467|ref|NP_001118182.1| aryl hydrocarbon receptor nuclear translocator [Oncorhynchus
mykiss]
gi|82071622|sp|P79832.1|ARNT_ONCMY RecName: Full=Aryl hydrocarbon receptor nuclear translocator;
Short=rtARNT
gi|1695923|gb|AAC60052.1| aryl hydrocarbon receptor nuclear translocator protein isoform b
[Oncorhynchus mykiss]
Length = 723
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 81/141 (57%), Gaps = 15/141 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ T++D
Sbjct: 74 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGSGNTAAD 127
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLFVV+ G V + ++++ + S+ +
Sbjct: 128 G-------TYKPSFLTDQELKHLILEAADGFLFVVSCESGRVVYVSDSLTPVLNQSQSDW 180
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
LG S+Y+ +H D + L
Sbjct: 181 LGSSLYDQLHPDDGDKLREQL 201
>gi|21739854|emb|CAD38953.1| hypothetical protein [Homo sapiens]
Length = 849
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 163 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 216
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 217 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 269
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 270 FGSTLYDQVHPDD 282
>gi|426331360|ref|XP_004026650.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 1
[Gorilla gorilla gorilla]
gi|410301158|gb|JAA29179.1| aryl hydrocarbon receptor nuclear translocator [Pan troglodytes]
Length = 789
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|258504850|gb|ACV73025.1| AHA-1 [Caenorhabditis remanei]
gi|258504854|gb|ACV73027.1| AHA-1 [Caenorhabditis remanei]
Length = 398
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + SL KPDK IL+ V+ ++ I+ +
Sbjct: 30 ERRRRNKMTHYINELAEMVPQCA------SLGRKPDKLTILRMAVSHMKGIRGHSAQDE- 82
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVV-NPDGYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV G V + ++I + +++ L
Sbjct: 83 ------TSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWL 136
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+++ LIH D + + L S VN
Sbjct: 137 QRNLNELIHPDDQDKIRDQLCGSEVSVN 164
>gi|296228733|ref|XP_002759936.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 1
[Callithrix jacchus]
Length = 789
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|410251146|gb|JAA13540.1| aryl hydrocarbon receptor nuclear translocator [Pan troglodytes]
gi|410353583|gb|JAA43395.1| aryl hydrocarbon receptor nuclear translocator [Pan troglodytes]
Length = 789
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|189054011|dbj|BAG36518.1| unnamed protein product [Homo sapiens]
Length = 789
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|4502231|ref|NP_001659.1| aryl hydrocarbon receptor nuclear translocator isoform 1 [Homo
sapiens]
gi|114163|sp|P27540.1|ARNT_HUMAN RecName: Full=Aryl hydrocarbon receptor nuclear translocator;
Short=ARNT protein; AltName: Full=Class E basic
helix-loop-helix protein 2; Short=bHLHe2; AltName:
Full=Dioxin receptor, nuclear translocator; AltName:
Full=Hypoxia-inducible factor 1-beta; Short=HIF-1-beta;
Short=HIF1-beta
gi|179004|gb|AAA51777.1| Arnt [Homo sapiens]
gi|12232595|emb|CAC21446.1| aryl hydrocarbon receptor nuclear translocator, ARNT [Homo sapiens]
gi|37654534|gb|AAQ96598.1| aryl hydrocarbon receptor nuclear translocator [Homo sapiens]
gi|119573895|gb|EAW53510.1| aryl hydrocarbon receptor nuclear translocator, isoform CRA_a [Homo
sapiens]
gi|158259515|dbj|BAF85716.1| unnamed protein product [Homo sapiens]
gi|158261377|dbj|BAF82866.1| unnamed protein product [Homo sapiens]
Length = 789
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|258504862|gb|ACV73031.1| AHA-1 [Caenorhabditis remanei]
Length = 398
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + SL KPDK IL+ V+ ++ I+ +
Sbjct: 30 ERRRRNKMTHYINELAEMVPQCA------SLGRKPDKLTILRMAVSHMKGIRGHSAQDE- 82
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVV-NPDGYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV G V + ++I + +++ L
Sbjct: 83 ------TSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWL 136
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+++ LIH D + + L S VN
Sbjct: 137 QRNLNELIHPDDQDKIRDQLCGSEVSVN 164
>gi|30060322|gb|AAO89091.1| ARNT exon 5 deletion variant [Rattus norvegicus]
Length = 785
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|7549744|ref|NP_036912.1| aryl hydrocarbon receptor nuclear translocator [Rattus norvegicus]
gi|2506887|sp|P41739.2|ARNT_RAT RecName: Full=Aryl hydrocarbon receptor nuclear translocator;
Short=ARNT protein; AltName: Full=Dioxin receptor,
nuclear translocator; AltName: Full=Hypoxia-inducible
factor 1-beta; Short=HIF-1-beta; Short=HIF1-beta
gi|1418282|gb|AAB03811.1| aryl hydrocarbon receptor nuclear translocator 1 [Rattus
norvegicus]
Length = 800
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|158256842|dbj|BAF84394.1| unnamed protein product [Homo sapiens]
Length = 773
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|74220117|dbj|BAE31247.1| unnamed protein product [Mus musculus]
Length = 791
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|397492854|ref|XP_003817335.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 1
[Pan paniscus]
Length = 789
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|296228735|ref|XP_002759937.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 2
[Callithrix jacchus]
Length = 774
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|26324496|dbj|BAC26002.1| unnamed protein product [Mus musculus]
Length = 760
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|258504838|gb|ACV73019.1| AHA-1 [Caenorhabditis remanei]
gi|258504840|gb|ACV73020.1| AHA-1 [Caenorhabditis remanei]
gi|258504842|gb|ACV73021.1| AHA-1 [Caenorhabditis remanei]
gi|258504844|gb|ACV73022.1| AHA-1 [Caenorhabditis remanei]
gi|258504846|gb|ACV73023.1| AHA-1 [Caenorhabditis remanei]
gi|258504848|gb|ACV73024.1| AHA-1 [Caenorhabditis remanei]
gi|258504852|gb|ACV73026.1| AHA-1 [Caenorhabditis remanei]
gi|258504856|gb|ACV73028.1| AHA-1 [Caenorhabditis remanei]
gi|258504858|gb|ACV73029.1| AHA-1 [Caenorhabditis remanei]
gi|258504860|gb|ACV73030.1| AHA-1 [Caenorhabditis remanei]
gi|258504864|gb|ACV73032.1| AHA-1 [Caenorhabditis remanei]
gi|258504866|gb|ACV73033.1| AHA-1 [Caenorhabditis remanei]
gi|258504868|gb|ACV73034.1| AHA-1 [Caenorhabditis remanei]
Length = 398
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + SL KPDK IL+ V+ ++ I+ +
Sbjct: 30 ERRRRNKMTHYINELAEMVPQCA------SLGRKPDKLTILRMAVSHMKGIRGHSAQDE- 82
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVV-NPDGYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV G V + ++I + +++ L
Sbjct: 83 ------TSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWL 136
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+++ LIH D + + L S VN
Sbjct: 137 QRNLNELIHPDDQDKIRDQLCGSEVSVN 164
>gi|164691041|dbj|BAF98703.1| unnamed protein product [Homo sapiens]
Length = 774
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEATDGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|555688|gb|AAA56717.1| aryl hydrocarbon receptor nuclear translocator protein [Mus
musculus]
Length = 791
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|168277998|dbj|BAG10977.1| aryl hydrocarbon receptor nuclear translocator [synthetic
construct]
Length = 787
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|30060326|gb|AAO89093.1| ARNT exon 11 deletion variant [Rattus norvegicus]
Length = 795
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|30231242|ref|NP_840080.1| clock homolog 3 [Danio rerio]
gi|21685552|dbj|BAC02687.1| bHLH-PAS transcription factor [Danio rerio]
Length = 813
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 17/148 (11%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ- 108
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ +R K+
Sbjct: 27 VSRNKSEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDYLRKNKEN 77
Query: 109 --QETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
Q SSD Q KP ++NE L+LEAL+GF V+ DGY+ + +E++ S +
Sbjct: 78 AAQSESSDIKQDW-----KPPFLSNEEFSQLMLEALDGFFLVMLTDGYIIYISESVTSLL 132
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCL 194
+ +++ +++ N + DH + L
Sbjct: 133 EHLPSDLMDQNLLNFLPVVDHGEVYKAL 160
>gi|426331362|ref|XP_004026651.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 2
[Gorilla gorilla gorilla]
Length = 774
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|83627702|ref|NP_033839.2| aryl hydrocarbon receptor nuclear translocator isoform b [Mus
musculus]
gi|74211331|dbj|BAE26426.1| unnamed protein product [Mus musculus]
Length = 776
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|397492856|ref|XP_003817336.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 2
[Pan paniscus]
Length = 774
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|30795242|ref|NP_848514.1| aryl hydrocarbon receptor nuclear translocator isoform 3 [Homo
sapiens]
gi|119573896|gb|EAW53511.1| aryl hydrocarbon receptor nuclear translocator, isoform CRA_b [Homo
sapiens]
Length = 774
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|83627709|ref|NP_001032826.1| aryl hydrocarbon receptor nuclear translocator isoform a [Mus
musculus]
gi|341940591|sp|P53762.3|ARNT_MOUSE RecName: Full=Aryl hydrocarbon receptor nuclear translocator;
Short=ARNT protein; AltName: Full=Dioxin receptor,
nuclear translocator; AltName: Full=Hypoxia-inducible
factor 1-beta; Short=HIF-1-beta; Short=HIF1-beta
gi|15277541|gb|AAH12870.1| Aryl hydrocarbon receptor nuclear translocator [Mus musculus]
gi|74142336|dbj|BAE31928.1| unnamed protein product [Mus musculus]
gi|148706869|gb|EDL38816.1| aryl hydrocarbon receptor nuclear translocator, isoform CRA_c [Mus
musculus]
Length = 791
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|403302851|ref|XP_003942063.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator [Saimiri
boliviensis boliviensis]
Length = 772
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 89 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 142
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 143 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 195
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 196 FGSTLYDQVHPDD 208
>gi|309747071|ref|NP_001184254.1| aryl hydrocarbon receptor nuclear translocator isoform 4 [Homo
sapiens]
Length = 773
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|111073857|dbj|BAF02595.1| aryl hydrocarbon receptor nuclear translocater [Mesocricetus
auratus]
Length = 778
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMV------PTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|60360486|dbj|BAD90487.1| mKIAA4051 protein [Mus musculus]
Length = 721
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 29 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 82
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 83 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 135
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 136 FGSTLYDQVHPDD 148
>gi|30060320|gb|AAO89090.1| ARNT [Rattus norvegicus]
Length = 800
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|30060328|gb|AAO89094.1| ARNT exon 20 insertion variant [Rattus norvegicus]
Length = 801
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|402856111|ref|XP_003892643.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 1
[Papio anubis]
Length = 789
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|119573898|gb|EAW53513.1| aryl hydrocarbon receptor nuclear translocator, isoform CRA_d [Homo
sapiens]
Length = 775
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 89 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 142
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 143 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 195
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 196 FGSTLYDQVHPDD 208
>gi|355558401|gb|EHH15181.1| hypothetical protein EGK_01238 [Macaca mulatta]
gi|380812754|gb|AFE78251.1| aryl hydrocarbon receptor nuclear translocator isoform 1 [Macaca
mulatta]
gi|383418367|gb|AFH32397.1| aryl hydrocarbon receptor nuclear translocator isoform 1 [Macaca
mulatta]
gi|384947034|gb|AFI37122.1| aryl hydrocarbon receptor nuclear translocator isoform 1 [Macaca
mulatta]
Length = 789
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|197101157|ref|NP_001125275.1| aryl hydrocarbon receptor nuclear translocator [Pongo abelii]
gi|55727528|emb|CAH90519.1| hypothetical protein [Pongo abelii]
Length = 789
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|383418365|gb|AFH32396.1| aryl hydrocarbon receptor nuclear translocator isoform 3 [Macaca
mulatta]
gi|384947032|gb|AFI37121.1| aryl hydrocarbon receptor nuclear translocator isoform 3 [Macaca
mulatta]
gi|387541736|gb|AFJ71495.1| aryl hydrocarbon receptor nuclear translocator isoform 3 [Macaca
mulatta]
Length = 774
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|62089340|dbj|BAD93114.1| aryl hydrocarbon receptor nuclear translocator isoform 1 variant
[Homo sapiens]
Length = 791
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 102 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 155
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 156 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 208
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 209 FGSTLYDQVHPDD 221
>gi|297279915|ref|XP_001106465.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator [Macaca
mulatta]
Length = 789
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|149030672|gb|EDL85709.1| aryl hydrocarbon receptor nuclear translocator, isoform CRA_c
[Rattus norvegicus]
Length = 605
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|305682540|dbj|BAJ16354.1| CYCLE [Thermobia domestica]
Length = 644
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 77/140 (55%), Gaps = 13/140 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
+KR R++ N YI EL+ ++ +++ K DK +L+ V ++ I+ A
Sbjct: 68 DKRWRDKMNTYITELSAMVPMCH------AMSRKLDKLTVLRMAVQHLKTIR------GA 115
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KP+ +++E L L+L+A EGFLFVV D G + + +E++ + YS+ ++L
Sbjct: 116 VHSYTEGHYKPSFLSDEELKHLILQAAEGFLFVVGCDRGRILYVSESVSQILNYSQGDLL 175
Query: 175 GKSVYNLIHHGDHARFHNCL 194
G+S ++++H D A+ L
Sbjct: 176 GQSWFDILHPKDVAKVKEQL 195
>gi|2702319|gb|AAC03365.1| aryl hydrocarbon receptor nuclear translocator [Homo sapiens]
Length = 328
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|341889177|gb|EGT45112.1| hypothetical protein CAEBREN_21788 [Caenorhabditis brenneri]
gi|341889180|gb|EGT45115.1| hypothetical protein CAEBREN_20344 [Caenorhabditis brenneri]
Length = 451
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + SL KPDK IL+ V+ ++ I+ +
Sbjct: 52 ERRRRNKMTHYINELAEMVPQCA------SLGRKPDKLTILRMAVSHMKGIRGHSAPDE- 104
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVV-NPDGYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV G V + ++I + +++ L
Sbjct: 105 ------TSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWL 158
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+++ LIH D + + L S VN
Sbjct: 159 QRNLNELIHPDDQDKIRDQLCGSEVSVN 186
>gi|443497931|dbj|BAM76759.1| CLOCK [Gryllus bimaculatus]
Length = 594
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 83/150 (55%), Gaps = 11/150 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N I EL+ ++S S K DK +L+ T++ ++N + S
Sbjct: 34 LSEKKRRDQFNMLINELSSMVSTNS---------RKMDKSTVLKSTISFLKNHNEIAVRS 84
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
A + E KP+ ++NE L+LEAL+GF+ V + G + + +E+I S + + ++
Sbjct: 85 RAHEIQE--DWKPSFLSNEEFTHLILEALDGFIMVFSSSGRIFYASESITSLLGHLPSDL 142
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNA 203
+ ++Y++++ D + +N + S+ V+
Sbjct: 143 MNMTIYDMVYEEDQSSLYNVFLNPSNCVDG 172
>gi|402856113|ref|XP_003892644.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 2
[Papio anubis]
Length = 774
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|297139784|ref|NP_001166569.1| aryl hydrocarbon receptor nuclear translocator [Cavia porcellus]
gi|111073859|dbj|BAF02596.1| aryl hydrocarbon receptor nuclear translocater [Cavia porcellus]
Length = 790
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMV------PTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLSQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|164698400|ref|NP_001106937.1| clock [Tribolium castaneum]
gi|140270858|gb|ABO86537.1| CLOCK [Tribolium castaneum]
gi|270004792|gb|EFA01240.1| clock [Tribolium castaneum]
Length = 581
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL+ +++ S K DK +L+ T+ ++N + S
Sbjct: 17 LSEKKRRDQFNLLVNELSSMVATGS---------RKMDKSTVLKSTIAFLKNHNEIAVRS 67
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E KPT +TNE L+LEA++GF+ V + G + + +E+I S + + +V
Sbjct: 68 RVNEIQE--DWKPTFLTNEEFTHLILEAVDGFIMVFSASGQIFYASESITSLLGHLPNQV 125
Query: 174 LGKSVYNLIHHGDHARFHNCLV-PSSHQ 200
L ++Y + + +H+ +N L+ PS Q
Sbjct: 126 LNMTIYEMANEEEHSHLYNILLTPSEDQ 153
>gi|194388286|dbj|BAG65527.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 82 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 135
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 136 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 188
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 189 FGSTLYDQVHPDD 201
>gi|157838017|ref|NP_989531.1| aryl hydrocarbon receptor nuclear translocator [Gallus gallus]
gi|13430373|gb|AAK25815.1|AF348088_1 aryl hydrocarbon receptor nuclear translocator [Gallus gallus]
Length = 805
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 80/141 (56%), Gaps = 15/141 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
G ++Y+ +H D + L
Sbjct: 205 FGSTLYDQVHPDDVGKLREQL 225
>gi|149030671|gb|EDL85708.1| aryl hydrocarbon receptor nuclear translocator, isoform CRA_b
[Rattus norvegicus]
Length = 620
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|149030673|gb|EDL85710.1| aryl hydrocarbon receptor nuclear translocator, isoform CRA_d
[Rattus norvegicus]
Length = 585
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|395856123|ref|XP_003800487.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator [Otolemur
garnettii]
Length = 781
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 89 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 142
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 143 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 195
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 196 FGSTLYDQVHPDD 208
>gi|355763131|gb|EHH62117.1| hypothetical protein EGM_20316, partial [Macaca fascicularis]
Length = 743
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 52 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 105
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 106 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 158
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 159 FGSTLYDQVHPDD 171
>gi|354473027|ref|XP_003498738.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Cricetulus griseus]
Length = 799
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 105 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 158
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 159 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 211
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 212 FGSTLYDQVHPDD 224
>gi|62898650|dbj|BAD97179.1| aryl hydrocarbon receptor nuclear translocator isoform 2 variant
[Homo sapiens]
Length = 315
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|351694421|gb|EHA97339.1| Aryl hydrocarbon receptor nuclear translocator, partial
[Heterocephalus glaber]
Length = 784
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 90 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 143
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 144 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 196
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 197 FGSTLYDQVHPDD 209
>gi|58700545|gb|AAW80970.1| BMAL1 [Xenopus laevis]
Length = 627
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 23/170 (13%)
Query: 29 FAESMSSLAVKPDKCAILQETVNQCLN--------EKRRREQENNYIEELAELISAASFA 80
F E M + K D +L+ T + N EKRRR++ N++I+ELA L+ +
Sbjct: 53 FDEGMDT--DKDDPHGLLEFTEGRLRNAREAHSQIEKRRRDKMNSFIDELASLVPTCN-- 108
Query: 81 ESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLE 140
+++ K DK +L+ ++ ++ A ++ KP+ ++++ L L+L
Sbjct: 109 ----AMSRKLDKLTVLRMARQHMKTLRG------ATNPYTEANYKPSFLSDDELKQLILR 158
Query: 141 ALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHAR 189
A +GFLFVV D G + F +E++ + YS+ +++G+S+++ +H D A+
Sbjct: 159 AADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAK 208
>gi|432908659|ref|XP_004077970.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Oryzias latipes]
Length = 724
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 81/141 (57%), Gaps = 15/141 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ T++D
Sbjct: 75 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGSGNTNAD 128
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLFVV+ + G + + ++++ + + E
Sbjct: 129 G-------SYKPSFLTDQELKHLILEAADGFLFVVSCETGRIVYVSDSVTPVLNQLQSEW 181
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
LG S+Y+ +H D + L
Sbjct: 182 LGSSLYDQLHPEDTEKLREQL 202
>gi|194751957|ref|XP_001958290.1| GF10846 [Drosophila ananassae]
gi|190625572|gb|EDV41096.1| GF10846 [Drosophila ananassae]
Length = 412
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I ++ K DK +L+ V +R I+ S +
Sbjct: 39 EKRRRDKMNTYINELSSMIPMCY------AMQRKLDKLTVLRMAVQHLRGIR----GSGS 88
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ VS +P+ ++++ L ++L+A EGFLFVV D G + + +E++ + + ++ E+L
Sbjct: 89 LHPFNVSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSESVSNVLNCTQAELL 148
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 149 GQSWFDVLHPKD 160
>gi|260279074|dbj|BAI44114.1| cycle protein [Bactrocera cucurbitae]
Length = 401
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I K DK +L+ TV +R+I+ +
Sbjct: 30 EKRRRDKMNTYINELSSMIPMCYVVPR------KLDKLTVLKYTVQHLRSIR------GS 77
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V KP+ ++++ L L+L+A EGFLFVV+ D G + + +E++ + S+ ++L
Sbjct: 78 VHPYSGGDYKPSFLSDQELKMLILQASEGFLFVVDCDRGRILYVSESVSQVLNCSQMDLL 137
Query: 175 GKSVYNLIHHGDHAR 189
G+S ++++H D A+
Sbjct: 138 GQSWFDILHPKDVAK 152
>gi|510267|gb|AAA56896.1| ARNT, partial [Rattus norvegicus]
Length = 358
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 3 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 56
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 57 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 109
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 110 FGSTLYDQVHPDD 122
>gi|87204427|gb|ABD32161.1| aryl hydrocarbon receptor nuclear translocator 2 [Micropogonias
undulatus]
Length = 530
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 75/133 (56%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 71 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 124
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + + E
Sbjct: 125 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQAEW 177
Query: 174 LGKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 178 FGSTLYEQVHPDD 190
>gi|417404658|gb|JAA49071.1| Putative aryl-hydrocarbon receptor nuclear translocator [Desmodus
rotundus]
Length = 792
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 99 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 152
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ G V + ++++ + + E
Sbjct: 153 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCESGRVVYVSDSVTPVLNQPQSEW 205
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 206 FGSTLYDQVHPDD 218
>gi|196001273|ref|XP_002110504.1| hypothetical protein TRIADDRAFT_14211 [Trichoplax adhaerens]
gi|190586455|gb|EDV26508.1| hypothetical protein TRIADDRAFT_14211, partial [Trichoplax
adhaerens]
Length = 370
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 85/151 (56%), Gaps = 18/151 (11%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DKCA N EKRRR + N Y+ EL+ ++ + SL +PDK IL+ V
Sbjct: 15 DKCA----RENHSEIEKRRRNKMNAYVAELSNMLP------NCGSLPRRPDKLTILKMAV 64
Query: 101 NQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCT 159
+ +++++++E S AV + + ++++ + L+LEA +GFLFVV+ D G + + +
Sbjct: 65 SHMKSLRKEEMESRAV-------CRSSFLSDQEIKQLILEAADGFLFVVSCDNGSLLYVS 117
Query: 160 ENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
+ I + ++ S+ + G+S+Y L H D ++
Sbjct: 118 DAISNVLKLSQDDWTGRSLYELAHPEDTSKI 148
>gi|38173806|gb|AAH60838.1| ARNT protein [Homo sapiens]
gi|312153010|gb|ADQ33017.1| aryl hydrocarbon receptor nuclear translocator [synthetic
construct]
Length = 416
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQQQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|148226438|ref|NP_001083622.1| aryl hydrocarbon receptor nuclear translocator [Xenopus laevis]
gi|38303808|gb|AAH61940.1| Arnt.2 protein [Xenopus laevis]
Length = 765
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 76/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ T +D
Sbjct: 78 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTPTD 131
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLFVV+ + G + + ++++ + + E
Sbjct: 132 G-------TYKPSFLTDQELKHLILEAADGFLFVVSCETGRIVYVSDSVTPVLNQHQSEW 184
Query: 174 LGKSVYNLIHHGD 186
G SVY+ +H D
Sbjct: 185 FGSSVYDQVHPDD 197
>gi|71040629|dbj|BAE16018.1| BMAL-1 [Hyla japonica]
Length = 645
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 81/136 (59%), Gaps = 13/136 (9%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EKRRR++ N++I+E A L+ ++ +++ K DK +L+ V ++ ++
Sbjct: 115 SEKRRRDKMNSFIDESASLVPTSN------AMSRKLDKLTVLRMAVQHMKTLR------G 162
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
A ++ KP++++++ L L+L A +GFLFVV D G + F +E++ + YS+ ++
Sbjct: 163 AANPYTEANYKPSLLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDL 222
Query: 174 LGKSVYNLIHHGDHAR 189
+G+ +++ +H D A+
Sbjct: 223 IGQRLFDYLHPKDIAK 238
>gi|321479213|gb|EFX90169.1| hypothetical protein DAPPUDRAFT_346995 [Daphnia pulex]
Length = 1003
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 77/135 (57%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ ++ +++ K DK +L+ V ++ I+ A
Sbjct: 368 EKRRRDKMNTYITELSRVVPMCI------TMSHKLDKLTVLRMAVQHLKTIR------GA 415
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +++E L L+L++ +GFLFVV D G + + +E++ + YS+ ++L
Sbjct: 416 IHSYTEGDYKPSFLSDEELKRLILQSADGFLFVVGCDRGRMLYVSESVSQVLNYSQGDLL 475
Query: 175 GKSVYNLIHHGDHAR 189
G+S ++++H D A+
Sbjct: 476 GQSWFDILHPKDVAK 490
>gi|74194234|dbj|BAE24662.1| unnamed protein product [Mus musculus]
Length = 585
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|126722727|ref|NP_001075675.1| aryl hydrocarbon receptor nuclear translocator [Oryctolagus
cuniculus]
gi|3913077|sp|O02748.1|ARNT_RABIT RecName: Full=Aryl hydrocarbon receptor nuclear translocator;
Short=ARNT protein; AltName: Full=Dioxin receptor,
nuclear translocator; AltName: Full=Hypoxia-inducible
factor 1-beta; Short=HIF-1-beta; Short=HIF1-beta
gi|2094758|dbj|BAA19931.1| Arnt [Oryctolagus cuniculus]
Length = 790
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDIVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|119573899|gb|EAW53514.1| aryl hydrocarbon receptor nuclear translocator, isoform CRA_e [Homo
sapiens]
Length = 362
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|355669537|gb|AER94560.1| aryl hydrocarbon receptor nuclear translocator [Mustela putorius
furo]
Length = 707
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 70 ERRRRNKMTAYITELSDMV------PTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 123
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 124 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 176
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 177 FGSTLYDQVHPDD 189
>gi|432957104|ref|XP_004085788.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like,
partial [Oryzias latipes]
Length = 460
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 75/133 (56%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 60 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 113
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + + E
Sbjct: 114 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEW 166
Query: 174 LGKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 167 FGSTLYEQVHPDD 179
>gi|18874063|dbj|BAB85486.1| cycle [Neobellieria bullata]
Length = 115
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 73/127 (57%), Gaps = 13/127 (10%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KRRR++ N YI EL+ +I ++ K DK +L+ V +R+I+ AV
Sbjct: 1 KRRRDKMNTYINELSSMIPMCY------AMHRKLDKLTVLRMAVQHLRSIR------GAV 48
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLG 175
KPT ++++ L L+L+A EGFLFVV D G + + +E++ + + YS+ ++LG
Sbjct: 49 HAYSGGDCKPTFLSDQELKMLILQAAEGFLFVVGCDRGRILYVSESVSNVLNYSQTDLLG 108
Query: 176 KSVYNLI 182
+S ++++
Sbjct: 109 QSWFDVL 115
>gi|410968298|ref|XP_003990644.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator [Felis
catus]
Length = 790
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|312147020|dbj|BAJ33497.1| aryl hydrocarbon receptor nuclear translocator [Falco peregrinus]
Length = 807
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 80/141 (56%), Gaps = 15/141 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
G ++Y+ +H D + L
Sbjct: 205 FGSTLYDQVHPDDVGKLREQL 225
>gi|426218919|ref|XP_004003682.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator [Ovis
aries]
Length = 790
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|73981349|ref|XP_540303.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 1
[Canis lupus familiaris]
Length = 790
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|417515455|gb|JAA53556.1| aryl hydrocarbon receptor nuclear translocator isoform 3 [Sus
scrofa]
Length = 775
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>gi|344275466|ref|XP_003409533.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Loxodonta africana]
Length = 789
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|256070766|ref|XP_002571713.1| aryl hydrocarbon receptor nuclear translocator homolog (darnt)
[Schistosoma mansoni]
Length = 783
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 52 QCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-E 110
C E+RRR + YI EL E++ S SLA KPDK IL+ V+ +++I+
Sbjct: 52 HCEIERRRRNKMTAYINELCEMVPTCS------SLARKPDKLTILRMAVSHMKSIRGTGS 105
Query: 111 TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYS 169
T+SD S KP+ ++++ L L+LEA +GFLFV D G + + ++++ S + +
Sbjct: 106 TTSDG-------SYKPSFLSDQELKHLVLEAADGFLFVCQCDTGRIIYVSDSVTSVLNQT 158
Query: 170 RQEVLGKSVYNLIHHGD 186
+ E ++Y L H D
Sbjct: 159 QSEWYQHTLYELCHPDD 175
>gi|71795602|dbj|BAE16957.1| aryl hydrocarbon receptor nuclear translocator [Phoca sibirica]
Length = 786
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|32189344|ref|NP_776418.1| aryl hydrocarbon receptor nuclear translocator [Bos taurus]
gi|75049289|sp|Q9BE97.1|ARNT_BOVIN RecName: Full=Aryl hydrocarbon receptor nuclear translocator;
Short=ARNT protein
gi|13537427|dbj|BAB40668.1| Aryl hydrocarbon receptor nuclear translocator [Bos taurus]
Length = 790
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|301767942|ref|XP_002919403.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Ailuropoda melanoleuca]
Length = 785
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|296489528|tpg|DAA31641.1| TPA: aryl hydrocarbon receptor nuclear translocator [Bos taurus]
Length = 782
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|350646382|emb|CCD58941.1| aryl hydrocarbon receptor nuclear translocator homolog (darnt),,
putative [Schistosoma mansoni]
Length = 778
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 52 QCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-E 110
C E+RRR + YI EL E++ S SLA KPDK IL+ V+ +++I+
Sbjct: 52 HCEIERRRRNKMTAYINELCEMVPTCS------SLARKPDKLTILRMAVSHMKSIRGTGS 105
Query: 111 TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYS 169
T+SD S KP+ ++++ L L+LEA +GFLFV D G + + ++++ S + +
Sbjct: 106 TTSDG-------SYKPSFLSDQELKHLVLEAADGFLFVCQCDTGRIIYVSDSVTSVLNQT 158
Query: 170 RQEVLGKSVYNLIHHGD 186
+ E ++Y L H D
Sbjct: 159 QSEWYQHTLYELCHPDD 175
>gi|195168331|ref|XP_002024985.1| GL17825 [Drosophila persimilis]
gi|194108415|gb|EDW30458.1| GL17825 [Drosophila persimilis]
Length = 1039
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%), Gaps = 13/143 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LIS + K DK +L+ T++ +RN ++
Sbjct: 18 LSEKKRRDQFNSLVCDLSTLISTS---------GRKMDKSTVLKSTISFLRN---HNEAA 65
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KPT ++N+ L+LE+L+GF+ V + G + + +E+I S + Y Q+
Sbjct: 66 DRSKVFEIQQDWKPTFLSNDEFTHLMLESLDGFMIVFSSLGAIFYASESITSQLGYLPQD 125
Query: 173 VLGKSVYNLIHHGDHARFHNCLV 195
+ ++Y+L + DH N V
Sbjct: 126 LYRMNIYDLAYEMDHEALMNVFV 148
>gi|194210838|ref|XP_001916132.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator-like [Equus caballus]
Length = 789
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 111 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 164
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ G V + ++++ + + E
Sbjct: 165 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 217
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 218 FGSTLYDQVHPDD 230
>gi|158284389|ref|XP_306816.3| Anopheles gambiae str. PEST AGAP012873-PA [Anopheles gambiae str.
PEST]
gi|157021120|gb|EAA02003.3| AGAP012873-PA [Anopheles gambiae str. PEST]
Length = 121
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 13/133 (9%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KRRR++ N YI EL+ +I +++ K DK +L+ V ++ I+ AV
Sbjct: 1 KRRRDKMNTYITELSAMIPMCH------AMSRKLDKLTVLRMAVQHLKTIR------GAV 48
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLG 175
KP ++++ L L+L+A EGFLFVV D G + + +E++ + YS+ ++LG
Sbjct: 49 HSYTEGHYKPAFLSDQELKMLILQAAEGFLFVVGCDRGRILYVSESVSHILNYSQGDLLG 108
Query: 176 KSVYNLIHHGDHA 188
+S ++++H D A
Sbjct: 109 QSWFDILHPKDVA 121
>gi|395535913|ref|XP_003769965.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator
[Sarcophilus harrisii]
Length = 780
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 89 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 142
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 143 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 195
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 196 FGSTLYDQVHPDD 208
>gi|410928544|ref|XP_003977660.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Takifugu rubripes]
Length = 745
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 80/141 (56%), Gaps = 15/141 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ T+SD
Sbjct: 81 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGSGNTNSD 134
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLFVV+ + G + + ++++ + S+ +
Sbjct: 135 G-------SYKPSFLTDQELKHLILEAADGFLFVVSCETGRIVYVSDSVTPVLNQSQSDW 187
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
G +Y+ +H D + L
Sbjct: 188 FGSCLYDQLHPDDREKLREQL 208
>gi|334324746|ref|XP_001371034.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Monodelphis domestica]
Length = 812
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 122 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 175
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 176 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 228
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 229 FGSTLYDQVHPDD 241
>gi|198462706|ref|XP_001352524.2| GA20318 [Drosophila pseudoobscura pseudoobscura]
gi|198150944|gb|EAL30021.2| GA20318 [Drosophila pseudoobscura pseudoobscura]
Length = 1037
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%), Gaps = 13/143 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LIS + K DK +L+ T++ +RN ++
Sbjct: 18 LSEKKRRDQFNSLVCDLSTLISTS---------GRKMDKSTVLKSTISFLRN---HNEAA 65
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KPT ++N+ L+LE+L+GF+ V + G + + +E+I S + Y Q+
Sbjct: 66 DRSKVFEIQQDWKPTFLSNDEFTHLMLESLDGFMIVFSSLGAIFYASESITSQLGYLPQD 125
Query: 173 VLGKSVYNLIHHGDHARFHNCLV 195
+ ++Y+L + DH N V
Sbjct: 126 LYRMNIYDLAYEMDHEALMNVFV 148
>gi|335286987|ref|XP_001929705.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 2
[Sus scrofa]
Length = 766
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 74 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 127
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 128 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 180
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 181 FGSTLYDQVHPDD 193
>gi|170593337|ref|XP_001901421.1| aryl hydrocarbon receptor nuclear translocator protein, putative
[Brugia malayi]
gi|158591488|gb|EDP30101.1| aryl hydrocarbon receptor nuclear translocator protein, putative
[Brugia malayi]
Length = 493
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 15/148 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI ELAE++ + +L KPDK IL+ V+ ++ I+ S
Sbjct: 74 ERRRRNKMTQYINELAEMVPQCA------ALGRKPDKLTILRMAVSHMKTIRGGAQSE-- 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV D G + + +++ + + + +
Sbjct: 126 ------ASYKPSFLTDQELKHLILEAANGFLFVVCCDTGRILYVADSVVPVLNMHQDDWI 179
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+Y+LIH D + + L S +N
Sbjct: 180 HHVIYDLIHPDDMEKVRDQLCGSEASLN 207
>gi|30410888|gb|AAH51335.1| ARNT2 protein [Homo sapiens]
Length = 217
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 16/159 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++
Sbjct: 67 NHSEIERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTG 120
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
S+D + KP+ +T + L L+LEA +GFLFVV + G V + ++++ +
Sbjct: 121 NKSTDG-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQ 173
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA-WTS 206
+ E G ++Y +H D + L S + + W+S
Sbjct: 174 PQSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGQWSS 212
>gi|3219726|gb|AAC62234.1| CLOCK [Drosophila melanogaster]
Length = 1027
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 79/143 (55%), Gaps = 13/143 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ +++L+ LIS +S K DK +L+ T+ ++N ++
Sbjct: 22 LSEKKRRDQFNSLVDDLSALISTSS---------RKMDKSTVLKSTIAFLKN---HNEAT 69
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KP ++N+ L+LE+L+GF+ V + G + + +E+I S + Y Q+
Sbjct: 70 DRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQD 129
Query: 173 VLGKSVYNLIHHGDHARFHNCLV 195
+ ++Y+L + DH N +
Sbjct: 130 LYNMTIYDLAYEMDHEALLNIFM 152
>gi|327289411|ref|XP_003229418.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Anolis carolinensis]
Length = 795
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 83/150 (55%), Gaps = 15/150 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 87 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 140
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 141 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 193
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNA 203
G ++Y +H D + L S + + A
Sbjct: 194 FGSTLYEQVHPDDVEKLREQLSTSENALTA 223
>gi|393910755|gb|EFO19834.2| hypothetical protein LOAG_08661, partial [Loa loa]
Length = 489
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI ELAE++ + +L KPDK IL+ V+ ++ I+
Sbjct: 85 ERRRRNKMTQYINELAEMVPQCA------ALGRKPDKLTILRMAVSHMKAIR-------G 131
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
Q E +S KP+ +T++ L L+LEA GFLFVV D G + + ++I + + + L
Sbjct: 132 GSQNE-ASYKPSFLTDQELKHLILEAANGFLFVVCCDTGRILYVADSIVPVLNMRQDDWL 190
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+Y+L+H D + + L S +N
Sbjct: 191 HHVIYDLVHPDDMEKVRDQLCGSEASMN 218
>gi|154800428|ref|NP_001082130.1| aryl hydrocarbon receptor nuclear translocator 1 [Xenopus laevis]
gi|16024887|gb|AAK68638.1| aryl hydrocarbon receptor nuclear translocator Arnt [Xenopus
laevis]
Length = 713
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ T +D
Sbjct: 26 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTPTD 79
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
A + KP+ +T++ L L+LEA +GFLFVV+ + G + + ++++ + + E
Sbjct: 80 A-------TYKPSFLTDQELKHLILEAADGFLFVVSCETGRIVYVSDSVTPVLNQPQSEW 132
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 133 FGSTLYDQVHPDD 145
>gi|326912421|ref|XP_003202550.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Meleagris gallopavo]
Length = 604
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 23/190 (12%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V ++++K +S
Sbjct: 83 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLKSLKGSTSSYTE 136
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V+ KP+ + ++ L L+L A +GFLFVV + G + F +E++ + Y + ++
Sbjct: 137 VRY------KPSFLKDDELRQLILRAADGFLFVVGCNRGKILFVSESVCKILNYDQASLI 190
Query: 175 GKSVYNLIHHGDHARFHNCL-----VPSSHQVNAWTS---DSGGQAGKRPSLTASTPNRT 226
G+S+++ +H D A+ L P V+ T + QAG P+ S R+
Sbjct: 191 GQSLFDYLHPKDVAKVKEQLSSSDISPREKLVDGKTGLQVHTDFQAG--PARLNSGARRS 248
Query: 227 FNIRLLISST 236
F R+ S T
Sbjct: 249 FFCRIKCSRT 258
>gi|405977671|gb|EKC42110.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Crassostrea gigas]
Length = 228
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 79/132 (59%), Gaps = 14/132 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ ++ + ++ K DK +L+ V ++++++ S
Sbjct: 77 EKRRRDKMNAYITELSSMLPMCN------AMNRKLDKLTVLRMAVQHLKSLREGAAMS-- 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ ++P+ ++++ L L+LEA EGFLFVV+ D + + +E++++ + Y+R +++
Sbjct: 129 -----IPEARPSFLSDDDLKHLILEAAEGFLFVVSCDRARILYVSESVRNILNYTRLDLI 183
Query: 175 GKSVYNLIHHGD 186
G+S+ + +H D
Sbjct: 184 GQSLLDYLHPHD 195
>gi|312084348|ref|XP_003144239.1| aryl Hydrocarbon receptor Associated protein family member [Loa
loa]
Length = 468
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI ELAE++ + +L KPDK IL+ V+ ++ I+
Sbjct: 70 ERRRRNKMTQYINELAEMVPQCA------ALGRKPDKLTILRMAVSHMKAIR-------G 116
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
Q E +S KP+ +T++ L L+LEA GFLFVV D G + + ++I + + + L
Sbjct: 117 GSQNE-ASYKPSFLTDQELKHLILEAANGFLFVVCCDTGRILYVADSIVPVLNMRQDDWL 175
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+Y+L+H D + + L S +N
Sbjct: 176 HHVIYDLVHPDDMEKVRDQLCGSEASMN 203
>gi|432114312|gb|ELK36240.1| Aryl hydrocarbon receptor nuclear translocator [Myotis davidii]
Length = 897
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 33 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 86
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 87 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 139
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 140 FGSTLYDQVHPDD 152
>gi|332029962|gb|EGI69787.1| Nuclear receptor coactivator 1 [Acromyrmex echinatior]
Length = 96
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 42/59 (71%), Gaps = 6/59 (10%)
Query: 47 QETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRN 105
Q +N+CLNEKRRR QEN YI+ELAELISA + K DKC ILQ+TV+QIRN
Sbjct: 20 QSQLNKCLNEKRRRTQENLYIDELAELISATDMSSG------KTDKCQILQKTVDQIRN 72
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 37/54 (68%), Gaps = 6/54 (11%)
Query: 2 KCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLN 55
KCLNEKRRR QEN YI+ELAELISA + K DKC ILQ+TV+Q N
Sbjct: 25 KCLNEKRRRTQENLYIDELAELISATDMSSG------KTDKCQILQKTVDQIRN 72
>gi|110331805|gb|ABG67008.1| aryl hydrocarbon receptor nuclear translocator [Bos taurus]
Length = 590
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|348525940|ref|XP_003450479.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
isoform 2 [Oreochromis niloticus]
Length = 715
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 71 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 124
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEW 177
Query: 174 LGKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 178 FGSTLYEQVHPDD 190
>gi|45383840|ref|NP_989464.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
[Gallus gallus]
gi|82244306|sp|Q8QGQ7.1|BMAL2_CHICK RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 2; AltName: Full=Brain and muscle ARNT-like 2;
Short=cBMAL2
gi|19773560|gb|AAL98707.1|AF246958_1 BMAL2 [Gallus gallus]
Length = 622
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 23/190 (12%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V ++++K +S
Sbjct: 101 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLKSLKGSTSSYTE 154
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V+ KP+ + ++ L L+L A +GFLFVV + G + F +E++ + Y + ++
Sbjct: 155 VRY------KPSFLKDDELRQLILRAADGFLFVVGCNRGKILFVSESVCKILNYDQTSLI 208
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKR--------PSLTASTPNRT 226
G+S+++ +H D A+ L SS V+ G+ G + P+ S R+
Sbjct: 209 GQSLFDYLHPKDVAKVKEQL--SSSDVSPREKLVDGKTGLQVHTDFQAGPARLNSGARRS 266
Query: 227 FNIRLLISST 236
F R+ S T
Sbjct: 267 FFCRIKCSRT 276
>gi|148706867|gb|EDL38814.1| aryl hydrocarbon receptor nuclear translocator, isoform CRA_a [Mus
musculus]
Length = 693
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 15/132 (11%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSDA 115
+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 1 RRRRNKMTAYITELSDMV------PTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDG 54
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 55 -------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWF 107
Query: 175 GKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 108 GSTLYDQVHPDD 119
>gi|10998386|gb|AAG25921.1|AF219989_1 aryl hydrocarbon receptor nuclear translocator type 2c [Danio
rerio]
Length = 722
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 72 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 125
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + + E
Sbjct: 126 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEW 178
Query: 174 LGKSVYNLIHHGD 186
G +++ +H D
Sbjct: 179 FGSTLFEQVHPDD 191
>gi|321479053|gb|EFX90009.1| putative aryl hydrocarbon receptor nuclear translocator [Daphnia
pulex]
Length = 669
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 54 NHCEIERRRRNKMTAYITELSDMV------PTCSALARKPDKLTILRMAVAHMKALRGTG 107
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TS+D KP+ +T++ L L+LEA +GFLFV D G + + ++++ +
Sbjct: 108 NTSADGTY-------KPSFLTDQELKHLILEAADGFLFVSACDTGRLIYVSDSVTPVLHQ 160
Query: 169 SRQEVLGKSVYNLIHHGD 186
+ + G +Y+ +H D
Sbjct: 161 GQSDWFGSCLYDHLHPDD 178
>gi|348525938|ref|XP_003450478.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
isoform 1 [Oreochromis niloticus]
Length = 732
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 88 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 141
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 142 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEW 194
Query: 174 LGKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 195 FGSTLYEQVHPDD 207
>gi|10998382|gb|AAG25919.1| aryl hydrocarbon receptor nuclear translocator type 2a [Danio
rerio]
Length = 425
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 87 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 140
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + + E
Sbjct: 141 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEW 193
Query: 174 LGKSVYNLIHHGD 186
G +++ +H D
Sbjct: 194 FGSTLFEQVHPDD 206
>gi|8132411|gb|AAF73280.1|AF155066_1 aryl hydrocarbon receptor nuclear translocator 2A [Danio rerio]
Length = 425
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 87 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 140
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + + E
Sbjct: 141 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEW 193
Query: 174 LGKSVYNLIHHGD 186
G +++ +H D
Sbjct: 194 FGSTLFEQVHPDD 206
>gi|108935955|sp|Q9DG12.2|ARNT2_DANRE RecName: Full=Aryl hydrocarbon receptor nuclear translocator 2;
Short=ARNT protein 2; Short=zfARNT2
Length = 737
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 87 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 140
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + + E
Sbjct: 141 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEW 193
Query: 174 LGKSVYNLIHHGD 186
G +++ +H D
Sbjct: 194 FGSTLFEQVHPDD 206
>gi|350406507|ref|XP_003487795.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like, partial [Bombus impatiens]
Length = 737
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 78/140 (55%), Gaps = 13/140 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ ++ +++ K DK +L+ V ++ I TS
Sbjct: 176 EKRRRDKMNTYITELSAMVPMCH------AMSRKLDKLTVLRMAVQHLKTILGAVTS--- 226
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+G KP ++++ L L+L+A EGF+FVV D G + + +E++ + YS+ ++L
Sbjct: 227 YTEGHY---KPAFLSDQELKTLILQAAEGFVFVVGCDRGRILYVSESVLQTLNYSQGDLL 283
Query: 175 GKSVYNLIHHGDHARFHNCL 194
G+S ++++H D A+ L
Sbjct: 284 GQSWFDILHPKDVAKVKEQL 303
>gi|195126649|ref|XP_002007783.1| GI12195 [Drosophila mojavensis]
gi|193919392|gb|EDW18259.1| GI12195 [Drosophila mojavensis]
Length = 1039
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LI+ ++ K DK +L+ T+ ++N ++
Sbjct: 18 LSEKKRRDQFNSLVNDLSALITTSN---------RKMDKSTVLKSTIAFLKN---HNEAT 65
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KPT +TN+ L+LE+L+GF+ V + G + + +E+I S + Y +
Sbjct: 66 DRSKVFEIQPEWKPTFLTNDEFTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPHD 125
Query: 173 VLGKSVYNLIHHGDHARFHNCLV 195
+ S+Y+L + DH N +
Sbjct: 126 LYNMSIYDLAYEMDHEALLNIFL 148
>gi|195588559|ref|XP_002084025.1| GD13034 [Drosophila simulans]
gi|194196034|gb|EDX09610.1| GD13034 [Drosophila simulans]
Length = 1005
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Query: 47 QETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNI 106
+ T ++ L+EK+RR+Q N+ + +L+ LIS +S K DK +L+ T+ ++N
Sbjct: 6 RHTKSRNLSEKKRRDQFNSLVNDLSALISTSS---------RKMDKSTVLKSTIAFLKN- 55
Query: 107 KQQETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSF 165
++D + E+ KP ++N+ L+LE+L+GF+ V + G + + +E+I S
Sbjct: 56 --HNEATDRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSSMGSIFYASESITSQ 113
Query: 166 IRYSRQEVLGKSVYNLIHHGDHARFHNCLV 195
+ Y Q++ ++Y+L + DH N +
Sbjct: 114 LGYLPQDLYNMTIYDLAYEMDHEALLNIFM 143
>gi|449277560|gb|EMC85673.1| Aryl hydrocarbon receptor nuclear translocator-like protein 2,
partial [Columba livia]
Length = 606
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 77/135 (57%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V ++++K +S
Sbjct: 82 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLKSLKGSTSSYTE 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V+ KP+ + ++ L L+L A +GFLFVV + G + F +E++ + Y + ++
Sbjct: 136 VRY------KPSFLKDDELRQLILRAADGFLFVVGCNRGKILFVSESVCKILNYDQASLI 189
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 190 GQSLFDYLHPKDVAK 204
>gi|383860213|ref|XP_003705585.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Megachile rotundata]
Length = 899
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 77/135 (57%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ ++ +++ K DK +L+ V I+ I TS
Sbjct: 337 EKRRRDKMNTYITELSAMVPMCH------AMSRKLDKLTVLRMAVQHIKTILGAVTS--- 387
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+G KP ++++ L L+L+A EGF+FVV D G + + +E++ + YS+ ++L
Sbjct: 388 YTEGHY---KPAFLSDQELKTLILQAAEGFVFVVGCDRGRILYVSESVLQTLNYSQGDLL 444
Query: 175 GKSVYNLIHHGDHAR 189
G+S ++++H D A+
Sbjct: 445 GQSWFDILHPKDVAK 459
>gi|157132927|ref|XP_001662706.1| circadian locomoter output cycles kaput protein (dclock) (dpas1)
[Aedes aegypti]
gi|108871039|gb|EAT35264.1| AAEL012562-PA [Aedes aegypti]
Length = 900
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 86/155 (55%), Gaps = 13/155 (8%)
Query: 42 KCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVN 101
K ++ ++ ++ L+EK+RR+Q N + EL+ ++S+ S K DK +L+ T+
Sbjct: 12 KRFVVYDSKSRNLSEKKRRDQFNLLVNELSSMVSSNS---------RKMDKSTVLKSTIA 62
Query: 102 QIRNIKQQETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTE 160
+++ + S E+ + KP+ ++NE L+LEAL+GF+ V + G V + +E
Sbjct: 63 FLKSHNEIAVRSRV---HEIQTDWKPSFLSNEEFTHLILEALDGFIIVFSSTGRVFYASE 119
Query: 161 NIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLV 195
+I S + + ++L +VY++++ D +N L+
Sbjct: 120 SITSLLGHLPSDLLNMTVYDMVYEDDQNDLYNILL 154
>gi|95007805|dbj|BAE94239.1| aryl hydrocarbone receptor nuclear translocator [Daphnia magna]
Length = 668
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 54 NHCEIERRRRNKMTAYITELSDMV------PTCSALARKPDKLTILRMAVAHMKALRGTG 107
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TS+D KP+ +T++ L L+LEA +GFLFV D G + + ++++ +
Sbjct: 108 NTSADGTY-------KPSFLTDQELKHLILEAADGFLFVSACDTGRLIYVSDSVTPVLHQ 160
Query: 169 SRQEVLGKSVYNLIHHGD 186
+ + G +Y+ +H D
Sbjct: 161 GQSDWFGSCLYDHLHPDD 178
>gi|87280966|gb|ABD36590.1| CLOCK [Podarcis siculus]
Length = 510
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 79/146 (54%), Gaps = 13/146 (8%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ ++ K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLQKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+++ +S++N + G+ + + L
Sbjct: 145 LPSDLVDQSIFNFVPEGEAFKVYKIL 170
>gi|95007803|dbj|BAE94238.1| aryl hydrocarbone receptor nuclear translocator [Daphnia magna]
Length = 669
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 55 NHCEIERRRRNKMTAYITELSDMV------PTCSALARKPDKLTILRMAVAHMKALRGTG 108
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TS+D KP+ +T++ L L+LEA +GFLFV D G + + ++++ +
Sbjct: 109 NTSADGTY-------KPSFLTDQELKHLILEAADGFLFVSACDTGRLIYVSDSVTPVLHQ 161
Query: 169 SRQEVLGKSVYNLIHHGD 186
+ + G +Y+ +H D
Sbjct: 162 GQSDWFGSCLYDHLHPDD 179
>gi|24660399|ref|NP_523964.2| clock, isoform A [Drosophila melanogaster]
gi|7295192|gb|AAF50516.1| clock, isoform A [Drosophila melanogaster]
Length = 1023
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LIS +S K DK +L+ T+ ++N ++
Sbjct: 18 LSEKKRRDQFNSLVNDLSALISTSS---------RKMDKSTVLKSTIAFLKN---HNEAT 65
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KP ++N+ L+LE+L+GF+ V + G + + +E+I S + Y Q+
Sbjct: 66 DRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQD 125
Query: 173 VLGKSVYNLIHHGDHARFHNCLV 195
+ ++Y+L + DH N +
Sbjct: 126 LYNMTIYDLAYEMDHEALLNIFM 148
>gi|62472090|ref|NP_001014576.1| clock, isoform D [Drosophila melanogaster]
gi|47117813|sp|O61735.3|CLOCK_DROME RecName: Full=Circadian locomoter output cycles protein kaput;
AltName: Full=dCLOCK; AltName: Full=dPAS1
gi|61678474|gb|AAX52753.1| clock, isoform D [Drosophila melanogaster]
Length = 1027
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LIS +S K DK +L+ T+ ++N ++
Sbjct: 22 LSEKKRRDQFNSLVNDLSALISTSS---------RKMDKSTVLKSTIAFLKN---HNEAT 69
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KP ++N+ L+LE+L+GF+ V + G + + +E+I S + Y Q+
Sbjct: 70 DRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQD 129
Query: 173 VLGKSVYNLIHHGDHARFHNCLV 195
+ ++Y+L + DH N +
Sbjct: 130 LYNMTIYDLAYEMDHEALLNIFM 152
>gi|339283906|gb|AEJ38222.1| clock [Spodoptera exigua]
Length = 411
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL+ ++S + K DK +L+ T++ ++N + S
Sbjct: 18 LSEKKRRDQFNMLVNELSAMVSTNN---------RKMDKSTVLKSTISFLKNHNEITVRS 68
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
A E KP ++NE L+LEALEGF+ V + G + + +E+I S + ++ +V
Sbjct: 69 RAHDVQE--DWKPAFLSNEEFTYLVLEALEGFVMVFSATGQIYYVSESITSLLGHNPADV 126
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
+ KS+++L D +N L
Sbjct: 127 VNKSIFDLACEDDRPSLYNLL 147
>gi|3192867|gb|AAD10630.1| CLOCK [Drosophila melanogaster]
Length = 1023
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LIS +S K DK +L+ T+ ++N ++
Sbjct: 18 LSEKKRRDQFNSLVNDLSALISTSS---------RKMDKSTVLKSTIAFLKN---HNEAT 65
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KP ++N+ L+LE+L+GF+ V + G + + +E+I S + Y Q+
Sbjct: 66 DRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQD 125
Query: 173 VLGKSVYNLIHHGDHARFHNCLV 195
+ ++Y+L + DH N +
Sbjct: 126 LYNMTIYDLAYEMDHEALLNIFM 148
>gi|307212674|gb|EFN88377.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Harpegnathos saltator]
Length = 877
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 78/140 (55%), Gaps = 13/140 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ ++ +++ K DK +L+ V ++ I TS
Sbjct: 316 EKRRRDKMNTYITELSAMVPMCH------AMSRKLDKLTVLRMAVQHLKTILGAVTS--- 366
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+G KP ++++ L L+L+A EGF+FVV D G + + +E++ + YS+ ++L
Sbjct: 367 YTEGHY---KPAFLSDQELKTLILQAAEGFVFVVGCDRGRILYVSESVSQTLNYSQGDLL 423
Query: 175 GKSVYNLIHHGDHARFHNCL 194
G+S ++++H D A+ L
Sbjct: 424 GQSWFDILHPKDVAKVKEQL 443
>gi|307186380|gb|EFN72014.1| Aryl hydrocarbon receptor nuclear translocator-like protein 1
[Camponotus floridanus]
Length = 890
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 77/135 (57%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ ++ +++ K DK +L+ V ++ I TS
Sbjct: 328 EKRRRDKMNTYITELSAMVPMCH------AMSRKLDKLTVLRMAVQHLKTILGAVTS--- 378
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+G KP ++++ L L+L+A EGF+FVV D G + + +E++ + YS+ ++L
Sbjct: 379 YTEGHY---KPAFLSDQELKTLILQAAEGFVFVVGCDRGRILYVSESVSQTLNYSQGDLL 435
Query: 175 GKSVYNLIHHGDHAR 189
G+S ++++H D A+
Sbjct: 436 GQSWFDILHPKDVAK 450
>gi|380014080|ref|XP_003691071.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Apis florea]
Length = 830
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 78/140 (55%), Gaps = 13/140 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ ++ +++ K DK +L+ V ++ I TS
Sbjct: 262 EKRRRDKMNTYITELSAMVPMCH------AMSRKLDKLTVLRMAVQHLKTILGAVTS--- 312
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+G KP ++++ L L+L+A EGF+FVV D G + + +E++ + YS+ ++L
Sbjct: 313 YTEGHY---KPAFLSDQELKTLILQAAEGFVFVVGCDRGRILYVSESVLQTLNYSQGDLL 369
Query: 175 GKSVYNLIHHGDHARFHNCL 194
G+S ++++H D A+ L
Sbjct: 370 GQSWFDILHPKDVAKVKEQL 389
>gi|13569831|gb|AAG16635.1| bHLH-PAS factor ARNT2B [Danio rerio]
Length = 392
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 54 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 107
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + + E
Sbjct: 108 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEW 160
Query: 174 LGKSVYNLIHHGD 186
G +++ +H D
Sbjct: 161 FGSTLFEQVHPDD 173
>gi|357614851|gb|EHJ69324.1| clock [Danaus plexippus]
Length = 602
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 124/298 (41%), Gaps = 58/298 (19%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL ++S + K DK +L+ T++ ++N + S
Sbjct: 18 LSEKKRRDQFNMLVNELGSMVSTNN---------RKMDKSTVLKSTISFLKNHNEITVRS 68
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
A E KP ++NE L+LEALEGF+ V + G + + +E++ S + ++ ++
Sbjct: 69 RAHDVQE--DWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDI 126
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL-- 231
+ KS+++L D +N L +GG +T P +F RL
Sbjct: 127 INKSIFDLAFVDDRPNLYNIL------------QNGGTLDPTQVVTTDNP-ISFRCRLQR 173
Query: 232 --LISSTHLTAGLSRAGG---------ENGQDDSGDVSSEGGPCLMCVARRIPPT---DK 277
L +T L + G ENG D E +C R P D
Sbjct: 174 GTLDFRDEVTYELVQFDGHFRKNLESNENGHHSYQD-EHESRLLFVCTGRLYMPQLVRDV 232
Query: 278 QLSAPIE-QFTMK---------LD-RSGTIIG------MDTSGVSQTHTQYLNKAVAC 318
L I +FT + LD R+ IIG + TSG H L K V+C
Sbjct: 233 SLVDTIRSEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHFDDLEKVVSC 290
>gi|307193316|gb|EFN76178.1| Circadian locomoter output cycles protein kaput [Harpegnathos
saltator]
Length = 617
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL ++SA + K DK +L+ T+ ++N + S
Sbjct: 18 LSEKKRRDQFNMLVNELGSMVSANT---------RKMDKSTVLKSTILFLKNHNEIAVRS 68
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E KP+ ++NE L+LEAL+GF+ V + +G + + +E++ S + Y E+
Sbjct: 69 RVHEIQE--DWKPSFLSNEEFTHLILEALDGFIMVFSSNGRIYYVSESVTSLLGYLPNEL 126
Query: 174 LGKSVYNLIHHGDHARFHNCLV 195
++Y++ + D +N L+
Sbjct: 127 ESTTIYDITYQEDQPHLYNILL 148
>gi|183986673|ref|NP_001116925.1| aryl hydrocarbon receptor nuclear translocator [Xenopus (Silurana)
tropicalis]
gi|171847249|gb|AAI61511.1| arnt protein [Xenopus (Silurana) tropicalis]
Length = 763
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ T +D
Sbjct: 76 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTPTD 129
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLFVV+ + G + + ++++ + + E
Sbjct: 130 G-------TYKPSFLTDQELKHLILEAADGFLFVVSCETGRIVYVSDSVTPVLNQPQSEW 182
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 183 FGSTLYDQVHPDD 195
>gi|47219792|emb|CAG03419.1| unnamed protein product [Tetraodon nigroviridis]
Length = 376
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%), Gaps = 21/143 (14%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN I++L+ +I + ++ K DK +L+ V ++++K +S
Sbjct: 8 EKRRRDKMNNLIDKLSAMIPTCN------PMSRKLDKLTVLRMAVQHLKSLKGSGSSFSE 61
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLE--------ALEGFLFVVNPD-GYVNFCTENIKSFI 166
+S KP+ + +E L L+L+ A +GFLFVV D G + F +E++ +
Sbjct: 62 ------ASYKPSFLPDEELKHLVLKVNSPWPRPAADGFLFVVGCDRGKIVFVSESVAKIL 115
Query: 167 RYSRQEVLGKSVYNLIHHGDHAR 189
YSR E++G+S+++ +H D +
Sbjct: 116 NYSRTELIGQSLFDYVHPKDMGK 138
>gi|255693993|gb|ACU30155.1| hypoxia inducible factor 1 beta [Litopenaeus vannamei]
Length = 608
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 15/131 (11%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 11 NHCEIERRRRNKMTAYIAELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 64
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
T++D + KP+ +T++ L L+LEA +GFLFVV D G + + ++++ +
Sbjct: 65 NTNADG-------TYKPSFLTDQELKHLILEAADGFLFVVACDTGRIIYASDSVTPVLNQ 117
Query: 169 SRQEVLGKSVY 179
+ + G SVY
Sbjct: 118 PQSDWFGSSVY 128
>gi|194749637|ref|XP_001957245.1| GF24152 [Drosophila ananassae]
gi|190624527|gb|EDV40051.1| GF24152 [Drosophila ananassae]
Length = 999
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LIS +S K DK +L+ T+ ++N ++
Sbjct: 18 LSEKKRRDQFNSLVNDLSALISNSS---------RKMDKSTVLKSTIAFLKN---HNEAA 65
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KP ++N+ L+LE+L+GF+ V + G + + +E+I S + Y Q+
Sbjct: 66 DRSKVFEIQQDWKPAFLSNDEFTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQD 125
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGG 210
+ ++Y+L + DH N + + A +D G
Sbjct: 126 LYKMTIYDLAYEMDHEALLNIFQNPAPVIEARQTDIGA 163
>gi|3213258|gb|AAC39101.1| CLOCK [Drosophila melanogaster]
Length = 1015
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LIS +S K DK +L+ T+ ++N ++
Sbjct: 18 LSEKKRRDQFNSLVNDLSALISTSS---------RKMDKSTVLKSTIAFLKN---HNEAT 65
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KP ++N+ L+LE+L+GF+ V + G + + +E+I S + Y Q+
Sbjct: 66 DRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQD 125
Query: 173 VLGKSVYNLIHHGDHARFHNCLV 195
+ ++Y+L + DH N +
Sbjct: 126 LYKMTIYDLAYEMDHEALLNIFM 148
>gi|432899506|ref|XP_004076592.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Oryzias
latipes]
Length = 968
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+R++Q N I+EL ++ M DK ILQ T++ ++ K D
Sbjct: 151 SEKKRKDQFNVLIKELCTMLQGQGHPRKM-------DKSTILQRTIDFLQKQK------D 197
Query: 115 AVQQGEVSSS----KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSR 170
Q EVS KP+ ++NE L+LEAL+GFL + DG + + ++++ S I +
Sbjct: 198 ITAQNEVSDVRQDWKPSFLSNEEFTQLMLEALDGFLVALTTDGNIIYVSDSVSSLIGHLP 257
Query: 171 QEVLGKSVYNLIHHGDHARFHNCLVPSSHQV 201
+++ +S+ N + +H + L SSH +
Sbjct: 258 SDMVDQSILNFLPEREHGEVYKLL--SSHML 286
>gi|328776724|ref|XP_001121441.2| PREDICTED: cycle [Apis mellifera]
Length = 925
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 78/140 (55%), Gaps = 13/140 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ ++ +++ K DK +L+ V ++ I TS
Sbjct: 357 EKRRRDKMNTYITELSAMVPMCH------AMSRKLDKLTVLRMAVQHLKTILGAVTS--- 407
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+G KP ++++ L L+L+A EGF+FVV D G + + +E++ + YS+ ++L
Sbjct: 408 YTEGHY---KPAFLSDQELKTLILQAAEGFVFVVGCDRGRILYVSESVLQTLNYSQGDLL 464
Query: 175 GKSVYNLIHHGDHARFHNCL 194
G+S ++++H D A+ L
Sbjct: 465 GQSWFDILHPKDVAKVKEQL 484
>gi|58372114|ref|NP_571749.1| aryl hydrocarbon receptor nuclear translocator 2 [Danio rerio]
gi|10998384|gb|AAG25920.1|AF219988_1 aryl hydrocarbon receptor nuclear translocator type 2b [Danio
rerio]
Length = 737
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ + +A
Sbjct: 87 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMR---GTGNA 137
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G + KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + + E
Sbjct: 138 STDG---AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEWF 194
Query: 175 GKSVYNLIHHGD 186
G +++ +H D
Sbjct: 195 GSTLFEQVHPDD 206
>gi|383865803|ref|XP_003708362.1| PREDICTED: uncharacterized protein LOC100878984 [Megachile
rotundata]
Length = 724
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL ++S+ + K DK +L+ T++ ++N + S
Sbjct: 34 LSEKKRRDQFNMLVNELGSMVSSNT---------RKMDKSTVLKSTISFLKNHNEIAVRS 84
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E KP+ ++NE L+LEAL+GF+ V + G + + +E++ S + Y E+
Sbjct: 85 RVHEIQE--DWKPSFLSNEEFTHLILEALDGFIMVFSSSGRIYYVSESVTSLLGYLPNEL 142
Query: 174 LGKSVYNLIHHGDHARFHNCLV 195
++Y++ + D + +N L+
Sbjct: 143 ENTTIYDITYQEDQSSLYNVLL 164
>gi|444730312|gb|ELW70699.1| Aryl hydrocarbon receptor nuclear translocator 2 [Tupaia chinensis]
Length = 783
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 107 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 160
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 161 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 214
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 215 GSTLYEQVHPDD 226
>gi|116235171|dbj|BAF35030.1| CYCLE [Athalia rosae]
Length = 611
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 77/140 (55%), Gaps = 13/140 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ ++ +++ K DK +L+ V ++ I T
Sbjct: 51 EKRRRDKMNTYITELSAMVPMCH------AMSRKLDKLTVLRMAVQHLKTILGATT---P 101
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+G KP ++++ L L+L+A EGF+FVV D G + + +E++ + YS+ ++L
Sbjct: 102 YTEGHY---KPAFLSDQELKMLILQAAEGFVFVVGCDRGRILYVSESVSKTLNYSQGDLL 158
Query: 175 GKSVYNLIHHGDHARFHNCL 194
G+S ++++H D A+ L
Sbjct: 159 GQSWFDILHPKDVAKVKEQL 178
>gi|50235050|gb|AAT70731.1| aryl hydrocarbon receptor nuclear translocator 2c [Ctenopharyngodon
idella]
Length = 722
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 71 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 124
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEW 177
Query: 174 LGKSVYNLIHHGD 186
G +++ +H D
Sbjct: 178 FGSTLFEQVHPDD 190
>gi|340715991|ref|XP_003396488.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Bombus terrestris]
Length = 670
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 77/135 (57%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ ++ +++ K DK +L+ V ++ I TS
Sbjct: 170 EKRRRDKMNTYITELSAMVPMCH------AMSRKLDKLTVLRMAVQHLKTILGAVTS--- 220
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+G KP ++++ L L+L+A EGF+FVV D G + + +E++ + YS+ ++L
Sbjct: 221 YTEGHY---KPAFLSDQELKTLILQAAEGFVFVVGCDRGRILYVSESVLQTLNYSQGDLL 277
Query: 175 GKSVYNLIHHGDHAR 189
G+S ++++H D A+
Sbjct: 278 GQSWFDILHPKDVAK 292
>gi|50235048|gb|AAT70730.1| aryl hydrocarbon receptor nuclear translocator 2b [Ctenopharyngodon
idella]
Length = 737
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 86 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 139
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 140 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEW 192
Query: 174 LGKSVYNLIHHGD 186
G +++ +H D
Sbjct: 193 FGSTLFEQVHPDD 205
>gi|121309837|dbj|BAF44220.1| aryl hydrocarbon receptor nuclear translocator 1 [Phalacrocorax
carbo]
Length = 807
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 79/141 (56%), Gaps = 15/141 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L +LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHPILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
G ++Y+ +H D + L
Sbjct: 205 FGSTLYDQVHPDDVGKLREQL 225
>gi|297297078|ref|XP_001109712.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
3 [Macaca mulatta]
Length = 819
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S+D
Sbjct: 45 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 98
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 99 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEW 151
Query: 174 LGKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 152 FGSTLYEQVHPDD 164
>gi|332000000|ref|NP_001193634.1| aryl hydrocarbon receptor nuclear translocator 2 [Bos taurus]
Length = 717
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|410960433|ref|XP_003986794.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 [Felis
catus]
Length = 706
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|23271921|gb|AAH36099.1| ARNT2 protein [Homo sapiens]
gi|123995001|gb|ABM85102.1| aryl-hydrocarbon receptor nuclear translocator 2 [synthetic
construct]
gi|124126909|gb|ABM92227.1| aryl-hydrocarbon receptor nuclear translocator 2 [synthetic
construct]
Length = 716
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S+D
Sbjct: 72 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEW 178
Query: 174 LGKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 179 FGSTLYEQVHPDD 191
>gi|24210863|gb|AAN52084.1| aryl hydrocarbon receptor nuclear translocator protein [Peromyscus
maniculatus]
Length = 795
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 77/133 (57%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ T++D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTAAD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GF F+V+ + G V + ++++ + + E
Sbjct: 152 G-------SYKPSFLTDQELKHLILEAADGFPFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 205 FGSTLYDQVHPDD 217
>gi|73951283|ref|XP_850172.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
1 [Canis lupus familiaris]
Length = 706
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S+D
Sbjct: 61 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEW 167
Query: 174 LGKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 168 FGSTLYEQVHPDD 180
>gi|426380053|ref|XP_004056698.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
2 [Gorilla gorilla gorilla]
Length = 717
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|112790730|gb|ABI21880.1| cycle [Lutzomyia longipalpis]
Length = 622
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ ++ +++ K DK +L+ V ++ I+ A
Sbjct: 44 EKRRRDKMNTYITELSSMVPICH------AMSRKLDKLTVLRMAVQHLKTIR------GA 91
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEG--FLFVVNPD-GYVNFCTENIKSFIRYSRQE 172
V KP +++E L L+L+A EG FLFVV D G + + +E++ + YS+ +
Sbjct: 92 VHSYTEGHYKPAFLSDEELKMLILQAAEGGSFLFVVGCDRGRLLYISESVSQVLNYSQGD 151
Query: 173 VLGKSVYNLIHHGDHAR 189
+LG+S ++++H D A+
Sbjct: 152 LLGQSWFDILHPKDVAK 168
>gi|351704927|gb|EHB07846.1| Aryl hydrocarbon receptor nuclear translocator 2, partial
[Heterocephalus glaber]
Length = 708
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 63 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 116
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 117 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 170
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 171 GSTLYEQVHPDD 182
>gi|348580033|ref|XP_003475783.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
isoform 2 [Cavia porcellus]
Length = 706
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S+D
Sbjct: 61 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEW 167
Query: 174 LGKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 168 FGSTLYEQVHPDD 180
>gi|68303555|ref|NP_055677.3| aryl hydrocarbon receptor nuclear translocator 2 [Homo sapiens]
gi|125987793|sp|Q9HBZ2.2|ARNT2_HUMAN RecName: Full=Aryl hydrocarbon receptor nuclear translocator 2;
Short=ARNT protein 2; AltName: Full=Class E basic
helix-loop-helix protein 1; Short=bHLHe1
gi|380784501|gb|AFE64126.1| aryl hydrocarbon receptor nuclear translocator 2 [Macaca mulatta]
gi|384941258|gb|AFI34234.1| aryl hydrocarbon receptor nuclear translocator 2 [Macaca mulatta]
gi|410291822|gb|JAA24511.1| aryl-hydrocarbon receptor nuclear translocator 2 [Pan troglodytes]
Length = 717
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|117644770|emb|CAL37851.1| hypothetical protein [synthetic construct]
Length = 717
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|348580031|ref|XP_003475782.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
isoform 1 [Cavia porcellus]
Length = 701
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S+D
Sbjct: 61 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 G-------AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEW 167
Query: 174 LGKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 168 FGSTLYEQVHPDD 180
>gi|194206226|ref|XP_001501872.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 [Equus
caballus]
Length = 686
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|335292275|ref|XP_001926107.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
1 [Sus scrofa]
Length = 717
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|426248178|ref|XP_004017842.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 [Ovis
aries]
Length = 706
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|156373864|ref|XP_001629530.1| predicted protein [Nematostella vectensis]
gi|156216532|gb|EDO37467.1| predicted protein [Nematostella vectensis]
Length = 372
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 79/144 (54%), Gaps = 15/144 (10%)
Query: 44 AILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQI 103
AIL N E+RRR + N YI EL++++ S + LA KPDK +L+ VN +
Sbjct: 5 AILILRENHSEIERRRRNKMNAYINELSDMVP------SCTGLARKPDKLTVLRMAVNYM 58
Query: 104 RNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENI 162
+ ++ T+ V + KP+ ++++ L L+LEA +GFLFVVN V + +++I
Sbjct: 59 KTLRG--TAPQDV------NYKPSFLSDQELKHLILEAADGFLFVVNCQTATVVYVSDSI 110
Query: 163 KSFIRYSRQEVLGKSVYNLIHHGD 186
+ S+ + + +Y+LIH D
Sbjct: 111 SPVLNQSQNAWMNQCLYDLIHPED 134
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 12/79 (15%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
E+RRR + N YI EL++++ S + LA KPDK +L+ VN + Q+ N
Sbjct: 17 ERRRRNKMNAYINELSDMVP------SCTGLARKPDKLTVLRMAVNYMKTLRGTAPQDVN 70
Query: 66 YI------EELAELISAAS 78
Y +EL LI A+
Sbjct: 71 YKPSFLSDQELKHLILEAA 89
>gi|440910985|gb|ELR60718.1| hypothetical protein M91_03833, partial [Bos grunniens mutus]
Length = 707
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 62 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 115
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 116 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 169
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 170 GSTLYEQVHPDD 181
>gi|281354596|gb|EFB30180.1| hypothetical protein PANDA_007721 [Ailuropoda melanoleuca]
Length = 708
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 63 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 116
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 117 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 170
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 171 GSTLYEQVHPDD 182
>gi|156359347|ref|XP_001624731.1| predicted protein [Nematostella vectensis]
gi|156211529|gb|EDO32631.1| predicted protein [Nematostella vectensis]
Length = 376
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 79/134 (58%), Gaps = 13/134 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I + +++ K DK +L+ V +R ++ + A
Sbjct: 10 EKRRRDKMNTYINELSTMIPMCN------AMSRKLDKLTVLRMAVQHMRALRGR-----A 58
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V E ++ KP +++E L L+LEA +GFLFVV D G + + +++I++ + S+ +++
Sbjct: 59 VPFTE-TNYKPAFLSDEDLKNLVLEAADGFLFVVGCDRGRILYVSDSIQNSLYLSQLDLV 117
Query: 175 GKSVYNLIHHGDHA 188
G S Y+ +H D A
Sbjct: 118 GNSFYDQVHPRDVA 131
>gi|395822651|ref|XP_003784627.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
1 [Otolemur garnettii]
Length = 717
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|291225565|ref|XP_002732753.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Saccoglossus kowalevskii]
Length = 742
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 24/197 (12%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE 110
N E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++
Sbjct: 41 NHSEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTG 94
Query: 111 TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYS 169
+S + KP+ +T++ L L+LEA +GFLFV++ G V + ++++ + +
Sbjct: 95 NTSTE------GTYKPSFLTDQELKHLILEAADGFLFVISCETGRVIYVSDSVTPVLNQT 148
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD--------SGGQAGKRPSLTAS 221
+ E ++++L+H D + L S D G Q+ R + +
Sbjct: 149 QSEWFNNTLFDLVHPDDIEKLREQLSTSESPTTGRILDLKTGTVKKEGHQSSMRLCMGS- 207
Query: 222 TPNRTFNIRLLISSTHL 238
R F IR+ I ST L
Sbjct: 208 --RRGFIIRMKIGSTQL 222
>gi|114658475|ref|XP_001156233.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
5 [Pan troglodytes]
gi|10242106|gb|AAG15310.1|AF185610_1 aryl-hydrocarbon receptor nuclear translocator 2 [Homo sapiens]
gi|119619520|gb|EAW99114.1| aryl-hydrocarbon receptor nuclear translocator 2 [Homo sapiens]
gi|194381270|dbj|BAG58589.1| unnamed protein product [Homo sapiens]
Length = 706
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|426380051|ref|XP_004056697.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
1 [Gorilla gorilla gorilla]
Length = 706
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|301767426|ref|XP_002919129.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
[Ailuropoda melanoleuca]
Length = 706
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|296204244|ref|XP_002749246.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
2 [Callithrix jacchus]
Length = 706
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|395822653|ref|XP_003784628.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
2 [Otolemur garnettii]
Length = 706
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|397478912|ref|XP_003810778.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 [Pan
paniscus]
Length = 706
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|403258341|ref|XP_003921731.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2
[Saimiri boliviensis boliviensis]
Length = 706
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|260830027|ref|XP_002609963.1| hypothetical protein BRAFLDRAFT_124387 [Branchiostoma floridae]
gi|229295325|gb|EEN65973.1| hypothetical protein BRAFLDRAFT_124387 [Branchiostoma floridae]
Length = 506
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ +S
Sbjct: 95 ERRRRNKMTAYIAELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTE 148
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T++ L L+LEA +GFLFV + G + + ++++ + S+ +
Sbjct: 149 ------GTYKPSFLTDQELKHLILEAADGFLFVSACETGRIIYVSDSVVPVLNQSQSDWF 202
Query: 175 GKSVYNLIHHGD 186
G ++Y+L+H D
Sbjct: 203 GSTLYDLVHPDD 214
>gi|335292277|ref|XP_003356697.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 isoform
2 [Sus scrofa]
Length = 706
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|344284079|ref|XP_003413798.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2
[Loxodonta africana]
Length = 700
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|296475496|tpg|DAA17611.1| TPA: aryl hydrocarbon receptor nuclear translocator-like [Bos
taurus]
Length = 691
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 46 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 99
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 100 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 153
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 154 GSTLYEQVHPDD 165
>gi|121309839|dbj|BAF44221.1| aryl hydrocarbon receptor nuclear translocator 2 [Phalacrocorax
carbo]
Length = 716
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 71 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 124
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 178
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 179 GSTLYEQVHPDD 190
>gi|449281233|gb|EMC88354.1| Aryl hydrocarbon receptor nuclear translocator 2, partial [Columba
livia]
Length = 706
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|355692930|gb|EHH27533.1| Aryl hydrocarbon receptor nuclear translocator 2, partial [Macaca
mulatta]
gi|355778241|gb|EHH63277.1| Aryl hydrocarbon receptor nuclear translocator 2, partial [Macaca
fascicularis]
Length = 708
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 63 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 116
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 117 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 170
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 171 GSTLYEQVHPDD 182
>gi|1470080|gb|AAB05247.1| aryl hydrocarbon receptor nuclear translocator 2, partial [Rattus
norvegicus]
Length = 749
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 109 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 162
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 163 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 216
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 217 GSTLYEQVHPDD 228
>gi|357611544|gb|EHJ67534.1| putative Single minded [Danaus plexippus]
Length = 256
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 35/254 (13%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RRE+EN ELA+L+ S ++ + DK ++++ T + + K ++ D +
Sbjct: 10 RSRREKENAEFLELAKLLPLPS------AITSQLDKASVIRLTTSYL---KMRQVFPDGL 60
Query: 117 QQGEVSSS---KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
++ +P ++ LG LL+ L+GF+FVV+PDG + + +E + S+ E+
Sbjct: 61 GDAWGAAPPPPQPRELSIRELGSHLLQTLDGFIFVVSPDGKIMYISETASVHLGLSQVEL 120
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPN------RTF 227
G S+Y IH DH L + + +G A P +PN R F
Sbjct: 121 TGNSIYEYIHQADHEEMSAVL-----SLQHPHTYAGPPAVGYPVGGTWSPNVDVECERAF 175
Query: 228 NIRLLISSTHLTAGLSRAG-------GENGQDDSGDVSSEGGPCLMCVARRIPP---TDK 277
IR+ AGL+ +G G GD ++ G L+ V +PP T+
Sbjct: 176 FIRMKCVLAKRNAGLTTSGYKVIHCSGYLRARRFGDGTAPLG--LVAVGHSLPPSAVTEL 233
Query: 278 QLSAPIEQFTMKLD 291
+L + + F LD
Sbjct: 234 KLHSNMFMFRASLD 247
>gi|195436110|ref|XP_002066021.1| GK10694 [Drosophila willistoni]
gi|194162106|gb|EDW77007.1| GK10694 [Drosophila willistoni]
Length = 1132
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LIS ++ K DK +L+ T+ ++N ++
Sbjct: 18 LSEKKRRDQFNSLVNDLSALISTSN---------RKMDKSTVLKSTIAFLKN---HNEAT 65
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KPT +TN+ L+LE+L+GF+ V + G + + +E+I S + Y +
Sbjct: 66 DRSKVFEIQQDWKPTFLTNDEFTHLMLESLDGFMIVFSSMGSIFYASESITSQLGYLPND 125
Query: 173 VLGKSVYNLIHHGDHARFHNCLV 195
+ S+Y++ + DH N +
Sbjct: 126 LYNMSIYDVAYEMDHEALLNIFM 148
>gi|158294626|ref|XP_315720.4| AGAP005711-PA [Anopheles gambiae str. PEST]
gi|157015652|gb|EAA11642.4| AGAP005711-PA [Anopheles gambiae str. PEST]
Length = 1030
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 79/143 (55%), Gaps = 13/143 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL+ ++S+ S K DK +L+ T+ +++ + S
Sbjct: 18 LSEKKRRDQFNLLVNELSSMVSSNS---------RKMDKSTVLKSTIAFLKSHNEIAVRS 68
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
E+ + KP+ ++NE L+LEAL+GF+ V + G V + +E+I S + + +
Sbjct: 69 RV---HEIQTDWKPSFLSNEEFTHLILEALDGFIIVFSSTGRVFYASESITSLLGHLPSD 125
Query: 173 VLGKSVYNLIHHGDHARFHNCLV 195
+L +VY++++ D +N L+
Sbjct: 126 LLNMTVYDMVYEDDQNDLYNILL 148
>gi|449498961|ref|XP_002193300.2| PREDICTED: neuronal PAS domain-containing protein 2-like
[Taeniopygia guttata]
Length = 615
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 77/142 (54%), Gaps = 9/142 (6%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL ++ +K DK ILQ T++ ++ K+ ++
Sbjct: 17 SEKKRRDQFNVLIKELCTMLQGHGHP-------LKMDKSTILQRTIDFLQKQKEITAQTE 69
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
A Q + KP+ ++NE L+LEAL+GFL + DG + + ++++ S + + +++
Sbjct: 70 ACQIRQ--DWKPSFLSNEEFTQLMLEALDGFLIALTTDGIIIYVSDSVSSLLGHLPSDLV 127
Query: 175 GKSVYNLIHHGDHARFHNCLVP 196
+++ N + G+ + + L P
Sbjct: 128 DQNILNFLPEGEQSEVYKLLSP 149
>gi|125987794|sp|Q61324.2|ARNT2_MOUSE RecName: Full=Aryl hydrocarbon receptor nuclear translocator 2;
Short=ARNT protein 2
gi|148674912|gb|EDL06859.1| aryl hydrocarbon receptor nuclear translocator 2, isoform CRA_a
[Mus musculus]
Length = 712
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|30060330|gb|AAO89095.1| ARNT2 exon 19 insertion variant [Rattus norvegicus]
gi|149057443|gb|EDM08766.1| aryl hydrocarbon receptor nuclear translocator 2, isoform CRA_b
[Rattus norvegicus]
Length = 689
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|449471188|ref|XP_002197431.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2
[Taeniopygia guttata]
Length = 716
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 71 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 124
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 178
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 179 GSTLYEQVHPDD 190
>gi|158631187|ref|NP_036913.3| aryl hydrocarbon receptor nuclear translocator 2 [Rattus
norvegicus]
gi|81864989|sp|Q78E60.1|ARNT2_RAT RecName: Full=Aryl hydrocarbon receptor nuclear translocator 2;
Short=ARNT protein 2
gi|1408268|gb|AAB03666.1| aryl hydrocarbon receptor nuclear translocator 2 [Rattus
norvegicus]
gi|149057442|gb|EDM08765.1| aryl hydrocarbon receptor nuclear translocator 2, isoform CRA_a
[Rattus norvegicus]
Length = 712
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|34328095|ref|NP_031514.2| aryl hydrocarbon receptor nuclear translocator 2 [Mus musculus]
gi|32451875|gb|AAH54546.1| Aryl hydrocarbon receptor nuclear translocator 2 [Mus musculus]
Length = 712
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|31874126|emb|CAD97972.1| hypothetical protein [Homo sapiens]
Length = 566
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|354504024|ref|XP_003514079.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
[Cricetulus griseus]
Length = 621
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 60 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 113
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 114 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 167
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 168 GSTLYEQVHPDD 179
>gi|1304146|dbj|BAA09799.1| Arnt2 [Mus musculus]
Length = 712
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|118095884|ref|XP_413854.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2 [Gallus
gallus]
Length = 716
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 71 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 124
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 178
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 179 GSTLYEQVHPDD 190
>gi|18858445|ref|NP_571032.1| circadian locomoter output cycles protein kaput [Danio rerio]
gi|4680719|gb|AAD27749.1|AF133306_1 transcription factor clock [Danio rerio]
Length = 893
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 84/157 (53%), Gaps = 15/157 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ +R K+
Sbjct: 28 VSRNRSEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLRKHKEI 78
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
S++ E+ KP ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 79 AAQSES---SEIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTSLLEH 135
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWT 205
+++ +++ N + G+H+ + L S+H + T
Sbjct: 136 LPSDLVDQNLLNFLPLGEHSEVYKAL--STHMLEGET 170
>gi|291410472|ref|XP_002721520.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
[Oryctolagus cuniculus]
Length = 660
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|402875068|ref|XP_003901340.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
[Papio anubis]
Length = 587
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|395502346|ref|XP_003755542.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2
[Sarcophilus harrisii]
Length = 705
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 60 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 113
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 114 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 167
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 168 GSTLYEQVHPDD 179
>gi|326926724|ref|XP_003209548.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
[Meleagris gallopavo]
Length = 751
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 106 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 159
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 160 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 213
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 214 GSTLYEQVHPDD 225
>gi|260833470|ref|XP_002611680.1| hypothetical protein BRAFLDRAFT_63636 [Branchiostoma floridae]
gi|229297051|gb|EEN67690.1| hypothetical protein BRAFLDRAFT_63636 [Branchiostoma floridae]
Length = 1410
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 82/155 (52%), Gaps = 11/155 (7%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I EL ++S+ + K DK ++LQ T+ ++ K+ S+
Sbjct: 594 SEKKRRDQFNILINELCSMVSSNN---------RKMDKSSVLQSTIAFLKRNKEITAQSE 644
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
A + E + KP +TNE L+L+A GF+ +N G + + +EN+ S + + +++
Sbjct: 645 ANEIKE--NWKPPFLTNEEFSQLMLDATNGFMLAINKQGKILYVSENVTSLLGHLPNDLV 702
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSG 209
G ++ +++H + + N L + ++ SD G
Sbjct: 703 GNTLGDMVHEKEKVQTCNLLTHHTLHLDQTESDYG 737
>gi|126273729|ref|XP_001367955.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2
[Monodelphis domestica]
Length = 705
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 60 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 113
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 114 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 167
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 168 GSTLYEQVHPDD 179
>gi|78057333|gb|ABB17190.1| aryl hydrocarbon receptor nuclear translocator 2 [Rattus
norvegicus]
Length = 712
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 125
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 126 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 180 GSTLYEQVHPDD 191
>gi|83817019|ref|NP_001033049.1| aryl hydrocarbon receptor 2A [Takifugu rubripes]
gi|68349475|gb|AAY96631.1| aryl hydrocarbon receptor 2A [Takifugu rubripes]
Length = 912
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 34/272 (12%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-------NIKQQ 109
KR R++ N +E L EL+ F+E + + + DK ++L+ +V +R +I+ +
Sbjct: 36 KRHRDRLNGELERLTELLP---FSEEVRT---RLDKLSVLRLSVGYLRVKSYCSASIRSR 89
Query: 110 ETSS-DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
TS G+ SS ++E G LLL+AL GF+ VV +G V + + IK ++ +
Sbjct: 90 RTSPLSPGASGQNGSSTDAAGSSE--GDLLLQALNGFVMVVTSEGLVFYVSPTIKDYLGF 147
Query: 169 SRQEVLGKSVYNLIHHGDHARF----HNCLVPSSHQVNAWTSDSGGQA-----GKRPSLT 219
+ +V+ +SV+ LIH D F H L P + + +A S G A + P
Sbjct: 148 HQSDVVHQSVFELIHTDDRESFRQQLHFALNPPA-ETDADGRQSCGSAVTYSPDQLPPEN 206
Query: 220 ASTPNRTF--NIRLLISSTHLTAGLSRAG------GENGQDDSGDVSSEGGPCLMCVARR 271
+S RTF R L+ ++ LS G G+NG DS S
Sbjct: 207 SSFLERTFVCRFRCLLDNSSGFLALSFQGRLKYLHGQNGLRDSRTCSHPQLALFTIAVPV 266
Query: 272 IPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSG 303
PP ++ A + F K T +G+D+ G
Sbjct: 267 HPPPIVEIRAKMLLFQSKHKLDFTPMGIDSRG 298
>gi|26006133|dbj|BAC41409.1| mKIAA0307 protein [Mus musculus]
Length = 725
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ S
Sbjct: 85 ERRRRNKMTQYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSMRGTGNKSTD 138
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 139 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 192
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 193 GSTLYEQVHPDD 204
>gi|190339127|gb|AAI63244.1| Clock protein [Danio rerio]
Length = 892
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 84/157 (53%), Gaps = 15/157 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ +R K+
Sbjct: 28 VSRNRSEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLRKHKEI 78
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
S++ E+ KP ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 79 AAQSES---SEIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTSLLEH 135
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWT 205
+++ +++ N + G+H+ + L S+H + T
Sbjct: 136 LPSDLVDQNLLNFLPLGEHSEVYKAL--STHMLEGET 170
>gi|67971702|dbj|BAE02193.1| unnamed protein product [Macaca fascicularis]
Length = 606
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 23 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 76
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 77 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 130
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 131 GSTLYEQVHPDD 142
>gi|403269212|ref|XP_003926648.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 1 [Saimiri boliviensis boliviensis]
Length = 560
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 40 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSCMG 93
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 94 ------NNYRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 147
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 148 GQSLFDFLHPKDVAK 162
>gi|297262026|ref|XP_002798550.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Macaca mulatta]
Length = 540
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 79 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYVG 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 133 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDFLHPKDVAK 201
>gi|260871346|gb|ACX53264.1| aryl hydrocarbon receptor nuclear translocator variant [Microgadus
tomcod]
gi|260871351|gb|ACX53267.1| aryl hydrocarbon receptor nuclear translocator variant [Microgadus
tomcod]
Length = 285
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 79/140 (56%), Gaps = 13/140 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + ++LA KPDK IL+ V+ +++++ T++
Sbjct: 81 ERRRRNKMTAYITELSDMVP------TCNALARKPDKLTILRMAVSHMKSLRGPGTTNTD 134
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP +T++ L L+LEA +GFLFVV+ + G + ++++ + S+ + L
Sbjct: 135 ------GTYKPCFLTDQELKHLVLEAADGFLFVVSCETGRIVHVSDSLTPVLNQSQSDWL 188
Query: 175 GKSVYNLIHHGDHARFHNCL 194
G S+Y+ +H D + L
Sbjct: 189 GSSLYDQLHPDDTEKLREQL 208
>gi|195354268|ref|XP_002043620.1| GM16138 [Drosophila sechellia]
gi|194127788|gb|EDW49831.1| GM16138 [Drosophila sechellia]
Length = 413
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I FA + K DK +L+ V +R I+ S +
Sbjct: 39 EKRRRDKMNTYINELSSMIPMC-FA-----MQRKLDKLTVLRMAVQHLRGIR----GSGS 88
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ S +P+ ++++ L ++L+A EGFLFVV D G + + ++++ S + ++ ++L
Sbjct: 89 LHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLL 148
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 149 GQSWFDVLHPKD 160
>gi|403269214|ref|XP_003926649.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 2 [Saimiri boliviensis boliviensis]
Length = 594
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 74 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSCMG 127
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 128 ------NNYRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 181
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 182 GQSLFDFLHPKDVAK 196
>gi|224084301|ref|XP_002193881.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator isoform 3
[Taeniopygia guttata]
Length = 806
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 78/141 (55%), Gaps = 15/141 (10%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 98 ERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVSHMKSLRGTGNTSTD 151
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 152 G-------TYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 204
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
++Y +H D + L
Sbjct: 205 FSSTLYEQVHPDDVGKLREQL 225
>gi|194865385|ref|XP_001971403.1| GG14938 [Drosophila erecta]
gi|190653186|gb|EDV50429.1| GG14938 [Drosophila erecta]
Length = 1082
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 75/135 (55%), Gaps = 13/135 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LIS S K DK +L+ T+ ++N ++
Sbjct: 22 LSEKKRRDQFNSLVNDLSALISTTS---------RKMDKSTVLKSTIAFLKN---HNEAT 69
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KP ++N+ L+LE+L+GF+ V + G + + +E+I S + Y Q+
Sbjct: 70 DRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQD 129
Query: 173 VLGKSVYNLIHHGDH 187
+ ++Y+L + DH
Sbjct: 130 LYNMTIYDLAYEMDH 144
>gi|380013056|ref|XP_003690586.1| PREDICTED: uncharacterized protein LOC100869092 [Apis florea]
Length = 726
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL ++S+ + K DK +L+ T+ ++N + S
Sbjct: 34 LSEKKRRDQFNMLVNELGSMVSSNT---------RKMDKSTVLKSTILFLKNHNEIAVRS 84
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E KP+ ++NE L+LEAL+GF+ V + G + + +E++ S + Y E+
Sbjct: 85 RVHEIQE--DWKPSFLSNEEFTHLILEALDGFIMVFSSSGRIYYVSESVTSLLGYLPNEL 142
Query: 174 LGKSVYNLIHHGDHARFHNCLV 195
+VY++ + D + +N L+
Sbjct: 143 ENTTVYDITYQEDQSPLYNVLL 164
>gi|194874376|ref|XP_001973390.1| GG13369 [Drosophila erecta]
gi|190655173|gb|EDV52416.1| GG13369 [Drosophila erecta]
Length = 413
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I FA + K DK +L+ V +R I+ S +
Sbjct: 39 EKRRRDKMNTYINELSSMIPMC-FA-----MQRKLDKLTVLRMAVQHLRGIR----GSGS 88
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ S +P+ ++++ L ++L+A EGFLFVV D G + + ++++ S + ++ ++L
Sbjct: 89 LHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLL 148
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 149 GQSWFDVLHPKD 160
>gi|24667005|ref|NP_524168.2| cycle [Drosophila melanogaster]
gi|152031583|sp|O61734.2|CYCL_DROME RecName: Full=Protein cycle; AltName: Full=Brain and muscle
ARNT-like 1; Short=BMAL1; AltName: Full=MOP3
gi|7293738|gb|AAF49107.1| cycle [Drosophila melanogaster]
gi|94400444|gb|ABF17888.1| FI01122p [Drosophila melanogaster]
gi|220952316|gb|ACL88701.1| cyc-PA [synthetic construct]
gi|220958734|gb|ACL91910.1| cyc-PA [synthetic construct]
Length = 413
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I FA + K DK +L+ V +R I+ S +
Sbjct: 39 EKRRRDKMNTYINELSSMIPMC-FA-----MQRKLDKLTVLRMAVQHLRGIR----GSGS 88
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ S +P+ ++++ L ++L+A EGFLFVV D G + + ++++ S + ++ ++L
Sbjct: 89 LHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLL 148
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 149 GQSWFDVLHPKD 160
>gi|195591633|ref|XP_002085543.1| GD12247 [Drosophila simulans]
gi|194197552|gb|EDX11128.1| GD12247 [Drosophila simulans]
Length = 413
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I FA + K DK +L+ V +R I+ S +
Sbjct: 39 EKRRRDKMNTYINELSSMIPMC-FA-----MQRKLDKLTVLRMAVQHLRGIR----GSGS 88
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ S +P+ ++++ L ++L+A EGFLFVV D G + + ++++ S + ++ ++L
Sbjct: 89 LHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLL 148
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 149 GQSWFDVLHPKD 160
>gi|3192865|gb|AAD10629.1| brain and muscle ARNT-like 1 [Drosophila melanogaster]
gi|3219728|gb|AAC62235.1| MOP3 [Drosophila melanogaster]
gi|21430932|gb|AAM51144.1| SD27452p [Drosophila melanogaster]
Length = 413
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I FA + K DK +L+ V +R I+ S +
Sbjct: 39 EKRRRDKMNTYINELSSMIPMC-FA-----MQRKLDKLTVLRMAVQHLRGIR----GSGS 88
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ S +P+ ++++ L ++L+A EGFLFVV D G + + ++++ S + ++ ++L
Sbjct: 89 LHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLL 148
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 149 GQSWFDVLHPKD 160
>gi|402885497|ref|XP_003906191.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 2 [Papio anubis]
Length = 599
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 79 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYVG 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 133 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDFLHPKDVAK 201
>gi|355564099|gb|EHH20599.1| Brain and muscle ARNT-like 2, partial [Macaca mulatta]
Length = 626
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 106 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHVRSLKGMTNSYVG 159
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 160 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 213
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 214 GQSLFDFLHPKDVAK 228
>gi|301605109|ref|XP_002932187.1| PREDICTED: single-minded homolog 1-like [Xenopus (Silurana)
tropicalis]
Length = 763
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 11/133 (8%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + + K + + +
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYL---KMRVVFPEGL 60
Query: 117 QQGEVSSSKPTVITN--EVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
+ +S+P+ + N LG LL+ L+GF+FVV PDG + + +E + S+ E+
Sbjct: 61 GEAWGHTSRPSTLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT 120
Query: 175 GKSVYNLIHHGDH 187
G S+Y IH DH
Sbjct: 121 GNSIYEYIHPADH 133
>gi|109095995|ref|XP_001103493.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like isoform 3 [Macaca mulatta]
Length = 599
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 79 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYVG 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 133 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDFLHPKDVAK 201
>gi|3283366|gb|AAC39124.1| bHLH-PAS protein CYCLE [Drosophila melanogaster]
Length = 413
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I FA + K DK +L+ V +R I+ S +
Sbjct: 39 EKRRRDKMNTYINELSSMIPMC-FA-----MQRKLDKLTVLRMAVQHLRGIR----GSGS 88
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ S +P+ ++++ L ++L+A EGFLFVV D G + + ++++ S + ++ ++L
Sbjct: 89 LHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLL 148
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 149 GQSWFDVLHPKD 160
>gi|402885495|ref|XP_003906190.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 1 [Papio anubis]
Length = 588
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 68 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYVG 121
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 122 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDFLHPKDVAK 190
>gi|327282439|ref|XP_003225950.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
[Anolis carolinensis]
Length = 719
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 71 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 124
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSLTPVLNQPQSEWF 178
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 179 GSTLYEQVHPDD 190
>gi|195496129|ref|XP_002095562.1| GE22462 [Drosophila yakuba]
gi|194181663|gb|EDW95274.1| GE22462 [Drosophila yakuba]
Length = 413
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 11/132 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I FA + K DK +L+ V +R I+ S +
Sbjct: 39 EKRRRDKMNTYINELSSMIPMC-FA-----MQRKLDKLTVLRMAVQHLRGIR----GSGS 88
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ S +P+ ++++ L ++L+A EGFLFVV D G + + ++++ S + ++ ++L
Sbjct: 89 LHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLL 148
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 149 GQSWFDVLHPKD 160
>gi|297262022|ref|XP_002798549.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Macaca mulatta]
Length = 588
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 68 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYVG 121
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 122 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDFLHPKDVAK 190
>gi|402885503|ref|XP_003906194.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 5 [Papio anubis]
Length = 622
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 102 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYVG 155
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 156 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 209
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 210 GQSLFDFLHPKDVAK 224
>gi|297262024|ref|XP_001103326.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like isoform 1 [Macaca mulatta]
Length = 622
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 102 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYVG 155
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 156 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 209
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 210 GQSLFDFLHPKDVAK 224
>gi|410046905|ref|XP_003952280.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Pan troglodytes]
Length = 540
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 79 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 133 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDFLHPKDVAK 201
>gi|351721535|ref|NP_001234934.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
isoform 5 [Homo sapiens]
Length = 540
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 79 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 133 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDFLHPKDVAK 201
>gi|344258050|gb|EGW14154.1| Aryl hydrocarbon receptor nuclear translocator 2 [Cricetulus
griseus]
Length = 506
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 18 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 71
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 72 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 125
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 126 GSTLYEQVHPDD 137
>gi|38176144|gb|AAR13011.1| clock [Danaus plexippus]
Length = 602
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR Q N + EL ++S + K DK +L+ T++ ++N + S
Sbjct: 18 LSEKKRRGQFNMLVNELGSMVSTNN---------RKMDKSTVLKSTISFLKNHNEITVRS 68
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
A E KP ++NE L+LEALEGF+ V + G + + +E++ S + ++ ++
Sbjct: 69 RAHDVQE--DWKPAFLSNEEFTYLVLEALEGFVMVFSASGCIYYVSESVTSLLGHTPGDI 126
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
+ KS+++L D +N L
Sbjct: 127 INKSIFDLAFVDDRPNLYNIL 147
>gi|402885505|ref|XP_003906195.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 6 [Papio anubis]
Length = 585
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 65 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYVG 118
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 119 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 172
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 173 GQSLFDFLHPKDVAK 187
>gi|30231248|ref|NP_840084.1| neuronal PAS domain protein 2 [Danio rerio]
gi|21685550|dbj|BAC02686.1| bHLH-PAS transcription factor [Danio rerio]
gi|190338711|gb|AAI63256.1| Neuronal PAS domain protein 2 [Danio rerio]
Length = 845
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 15/149 (10%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ--QETS 112
+EK+RR+Q N I+EL ++ M DK ILQ T++ ++ K+ +T
Sbjct: 50 SEKKRRDQFNVLIKELCTMLQGQGHPRKM-------DKSTILQRTIDFLQKQKEITAQTE 102
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
S V+Q KP+ ++NE L+LEAL+GFL + DG + + ++++ S I + +
Sbjct: 103 SCEVRQ----DWKPSFLSNEEFTQLMLEALDGFLIALTTDGNIIYVSDSVSSLIGHLPSD 158
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQV 201
++ +++ N + +HA + L SSH +
Sbjct: 159 MVDQNILNFLPEREHADVYKLL--SSHML 185
>gi|348538800|ref|XP_003456878.1| PREDICTED: neuronal PAS domain-containing protein 2-like
[Oreochromis niloticus]
Length = 982
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 17/150 (11%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQI---RNIKQQET 111
+EK+RR+Q N I+EL ++ M DK ILQ T++ + ++I Q
Sbjct: 160 SEKKRRDQFNVLIKELCTMLQGQGHPRKM-------DKSTILQRTIDFLQKQKDITAQND 212
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D Q KP+ ++NE L+LEAL+GFL + DG + + ++++ S I +
Sbjct: 213 TCDVRQDW-----KPSFLSNEEFTQLMLEALDGFLVALTTDGNIIYVSDSVSSLIGHLPS 267
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQV 201
+++ +++ N + +H + L SSH +
Sbjct: 268 DMVDQNILNFLPEREHGEVYKLL--SSHML 295
>gi|297262020|ref|XP_002798548.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Macaca mulatta]
Length = 636
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 116 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYVG 169
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 170 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 223
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 224 GQSLFDFLHPKDVAK 238
>gi|402885501|ref|XP_003906193.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 4 [Papio anubis]
Length = 551
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 31 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYVG 84
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 85 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 138
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 139 GQSLFDFLHPKDVAK 153
>gi|355785980|gb|EHH66163.1| Brain and muscle ARNT-like 2, partial [Macaca fascicularis]
Length = 626
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 106 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYVG 159
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 160 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 213
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 214 GQSLFDFLHPKDVAK 228
>gi|332839702|ref|XP_003313823.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 1 [Pan troglodytes]
Length = 598
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 79 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 133 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDFLHPKDVAK 201
>gi|402885499|ref|XP_003906192.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 3 [Papio anubis]
Length = 636
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 116 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYVG 169
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 170 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 223
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 224 GQSLFDFLHPKDVAK 238
>gi|351721418|ref|NP_001234931.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
isoform 2 [Homo sapiens]
gi|17979652|gb|AAL50340.1|AF246961_1 brain-muscle-ARNT-like transcription factor 2b [Homo sapiens]
Length = 622
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 102 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 155
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 156 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 209
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 210 GQSLFDFLHPKDVAK 224
>gi|2245352|gb|AAB62395.1| hSIM1 [Homo sapiens]
Length = 766
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ AS ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLAS------AITSQVDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|332839706|ref|XP_003313825.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 3 [Pan troglodytes]
Length = 621
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 102 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 155
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 156 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 209
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 210 GQSLFDFLHPKDVAK 224
>gi|328779515|ref|XP_394233.4| PREDICTED: neuronal PAS domain-containing protein 2 [Apis
mellifera]
Length = 724
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL ++S+ + K DK +L+ T+ ++N + S
Sbjct: 34 LSEKKRRDQFNMLVNELGSMVSSNT---------RKMDKSTVLKSTILFLKNHNEIAVRS 84
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E KP+ ++NE L+LEAL+GF+ V + G + + +E++ S + Y E+
Sbjct: 85 RVHEIQE--DWKPSFLSNEEFTHLILEALDGFIMVFSSSGRIYYVSESVTSLLGYLPNEL 142
Query: 174 LGKSVYNLIHHGDHARFHNCLV 195
+VY++ + D + +N L+
Sbjct: 143 ENTTVYDITYQEDQSPLYNVLL 164
>gi|332839700|ref|XP_520811.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 5 [Pan troglodytes]
Length = 587
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 68 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 121
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 122 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDFLHPKDVAK 190
>gi|34782868|gb|AAH00172.3| ARNTL2 protein, partial [Homo sapiens]
Length = 578
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 58 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 111
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 112 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 165
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 166 GQSLFDFLHPKDVAK 180
>gi|351721450|ref|NP_001234932.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
isoform 3 [Homo sapiens]
gi|17979654|gb|AAL50341.1|AF246962_1 brain-muscle-ARNT-like transcription factor 2c [Homo sapiens]
gi|115529029|gb|AAI25063.1| ARNTL2 protein [Homo sapiens]
gi|119616959|gb|EAW96553.1| aryl hydrocarbon receptor nuclear translocator-like 2, isoform
CRA_b [Homo sapiens]
Length = 599
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 79 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 133 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDFLHPKDVAK 201
>gi|31745180|ref|NP_064568.3| aryl hydrocarbon receptor nuclear translocator-like protein 2
isoform 1 [Homo sapiens]
gi|124007121|sp|Q8WYA1.2|BMAL2_HUMAN RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 2; AltName: Full=Basic-helix-loop-helix-PAS
protein MOP9; AltName: Full=Brain and muscle ARNT-like
2; AltName: Full=CYCLE-like factor; Short=CLIF; AltName:
Full=Class E basic helix-loop-helix protein 6;
Short=bHLHe6; AltName: Full=Member of PAS protein 9;
AltName: Full=PAS domain-containing protein 9
gi|17979650|gb|AAL50339.1|AF246960_1 brain-muscle-ARNT-like transcription factor 2a [Homo sapiens]
gi|119616960|gb|EAW96554.1| aryl hydrocarbon receptor nuclear translocator-like 2, isoform
CRA_c [Homo sapiens]
Length = 636
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 116 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 169
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 170 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 223
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 224 GQSLFDFLHPKDVAK 238
>gi|7963667|gb|AAF71307.1|AF231339_1 bHLH-PAS transcription factor MOP9 [Homo sapiens]
Length = 572
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 52 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 105
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 106 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 159
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 160 GQSLFDFLHPKDVAK 174
>gi|332839704|ref|XP_003313824.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 2 [Pan troglodytes]
Length = 635
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 116 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 169
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 170 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 223
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 224 GQSLFDFLHPKDVAK 238
>gi|397517391|ref|XP_003828897.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 2 [Pan paniscus]
Length = 584
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 65 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 118
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 119 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 172
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 173 GQSLFDFLHPKDVAK 187
>gi|354493745|ref|XP_003509000.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator-like protein 2-like [Cricetulus griseus]
Length = 595
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 80/135 (59%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N+ I+EL+ +I +S A K DK ++L+ V +R+++ S
Sbjct: 107 EKRRRDKMNHLIQELSSVIPP------LSPAARKLDKLSVLRRAVQYLRSLRGMTESF-- 158
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
GE +S+P+ I ++ L L+L+ EGFLFVV + G + F +++I ++Y + ++
Sbjct: 159 --LGE--NSRPSFIQDKELSHLILKTAEGFLFVVGCERGQILFVSKSISKTLQYDQGTLV 214
Query: 175 GKSVYNLIHHGDHAR 189
G+++++ +H D A+
Sbjct: 215 GQNLFDFLHPKDVAK 229
>gi|351721480|ref|NP_001234933.1| aryl hydrocarbon receptor nuclear translocator-like protein 2
isoform 4 [Homo sapiens]
gi|17979656|gb|AAL50342.1|AF246963_1 brain-muscle-ARNT-like transcription factor 2d [Homo sapiens]
gi|115527957|gb|AAI25062.1| ARNTL2 protein [Homo sapiens]
Length = 588
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 68 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 121
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 122 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDFLHPKDVAK 190
>gi|410916801|ref|XP_003971875.1| PREDICTED: single-minded homolog 1-like [Takifugu rubripes]
Length = 760
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+++ S ++ + DK +I++ T + ++ I + +A
Sbjct: 10 RTRREKENSEFYELAKMLPLPS------AITSQLDKASIIRLTTSYLKMRIVFPQGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S ++P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHTSRTRPLDNIGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDHARFHNCLVP 196
S+Y +H DH L P
Sbjct: 122 NSIYEYVHPADHDEMTAVLTP 142
>gi|11345223|gb|AAG34652.1|AF256215_1 cycle-like factor CLIF [Homo sapiens]
gi|119616958|gb|EAW96552.1| aryl hydrocarbon receptor nuclear translocator-like 2, isoform
CRA_a [Homo sapiens]
Length = 602
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 82 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 136 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 189
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 190 GQSLFDFLHPKDVAK 204
>gi|9279803|dbj|BAB01485.1| transcription factor BMAL2 [Homo sapiens]
Length = 551
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 31 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 84
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 85 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 138
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 139 GQSLFDFLHPKDVAK 153
>gi|397517389|ref|XP_003828896.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 1 [Pan paniscus]
Length = 550
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 31 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 84
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 85 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 138
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 139 GQSLFDFLHPKDVAK 153
>gi|345484580|ref|XP_001602684.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like [Nasonia vitripennis]
Length = 823
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 78/140 (55%), Gaps = 13/140 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ ++ +++ K DK +L+ V ++ I TS
Sbjct: 262 EKRRRDKMNTYITELSSMVPMCH------AMSRKLDKLTVLRMAVQHLKTILGAVTS--- 312
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+G KP ++++ L L+L+A EGF+FVV D G + + ++++ + YS+ ++L
Sbjct: 313 YTEGHC---KPAFLSDQELKSLILQAAEGFVFVVGCDRGRLLYVSKSVSQTLNYSQGDLL 369
Query: 175 GKSVYNLIHHGDHARFHNCL 194
G+S ++++H D A+ L
Sbjct: 370 GQSWFDILHPKDVAKVKEQL 389
>gi|340719080|ref|XP_003397985.1| PREDICTED: hypothetical protein LOC100650446 [Bombus terrestris]
Length = 733
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL ++S+ + K DK +L+ T+ ++N + S
Sbjct: 34 LSEKKRRDQFNMLVNELGSMVSSNT---------RKMDKSTVLKSTILFLKNHNEIAVRS 84
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E KP+ ++NE L+LEAL+GF+ V + G + + +E++ S + Y E+
Sbjct: 85 RVHEIQE--DWKPSFLSNEEFTHLILEALDGFIMVFSSSGRIYYVSESVTSLLGYLPNEL 142
Query: 174 LGKSVYNLIHHGDHARFHNCLV 195
++Y++ + D + +N L+
Sbjct: 143 ENTTIYDITYQEDQSPLYNVLL 164
>gi|260871347|gb|ACX53265.1| aryl hydrocarbon receptor nuclear translocator [Microgadus tomcod]
gi|260871349|gb|ACX53266.1| aryl hydrocarbon receptor nuclear translocator [Microgadus tomcod]
Length = 733
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 79/140 (56%), Gaps = 13/140 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ + ++LA KPDK IL+ V+ +++++ T++
Sbjct: 81 ERRRRNKMTAYITELSDMVP------TCNALARKPDKLTILRMAVSHMKSLRGPGTTNTD 134
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP +T++ L L+LEA +GFLFVV+ + G + ++++ + S+ + L
Sbjct: 135 ------GTYKPCFLTDQELKHLVLEAADGFLFVVSCETGRIVHVSDSLTPVLNQSQSDWL 188
Query: 175 GKSVYNLIHHGDHARFHNCL 194
G S+Y+ +H D + L
Sbjct: 189 GSSLYDQLHPDDTEKLREQL 208
>gi|195017046|ref|XP_001984526.1| GH16514 [Drosophila grimshawi]
gi|193898008|gb|EDV96874.1| GH16514 [Drosophila grimshawi]
Length = 1034
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 83/155 (53%), Gaps = 13/155 (8%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LI+ ++ K DK +L+ T+ ++N ++
Sbjct: 18 LSEKKRRDQFNSLVNDLSALITPSN---------RKMDKSTVLKSTIAFLKN---HNEAT 65
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KPT +TN+ L+LE+L+GF+ V + G + + +E+I + + Y E
Sbjct: 66 DRSRVFEIQQDWKPTFLTNDEFTHLMLESLDGFMMVFSSMGSIFYTSESITAQLGYLPHE 125
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD 207
+ S+Y+L + +H N + + + A +D
Sbjct: 126 LYNMSIYDLAYDLEHEALLNIFLNPTPLIEARQTD 160
>gi|7963664|gb|AAF71306.1|AF231338_1 bHLH-PAS transcription factor MOP9 [Homo sapiens]
Length = 585
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 65 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 118
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 119 ------SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 172
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 173 GQSLFDFLHPKDVAK 187
>gi|312385502|gb|EFR29985.1| hypothetical protein AND_00709 [Anopheles darlingi]
Length = 1105
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 80/143 (55%), Gaps = 13/143 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL+ ++S+ S K DK +L+ T+ +++ + S
Sbjct: 65 LSEKKRRDQFNLLVNELSSMVSSNS---------RKMDKSTVLKSTIAFLKSHNEIAVRS 115
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
+ E+ + KP+ ++NE L+LEAL+GF+ V + G V + +E+I S + + +
Sbjct: 116 ---RVHEIQTDWKPSFLSNEEFTHLILEALDGFIIVFSSTGRVFYASESITSLLGHLPSD 172
Query: 173 VLGKSVYNLIHHGDHARFHNCLV 195
+L +VY++++ D ++ L+
Sbjct: 173 LLNMTVYDMVYEDDQNDLYHILL 195
>gi|363735786|ref|XP_003641611.1| PREDICTED: aryl hydrocarbon receptor-like [Gallus gallus]
Length = 922
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-----NIKQQET 111
KR RE+ N +E LA L+ F E + A DK +IL+ + +R + +
Sbjct: 27 KRHRERLNRELERLAALLP---FPEEV---AAGLDKLSILRLSAAFLRAKSFFRVALKNH 80
Query: 112 SSDAVQQGEVSSSKPTVITNEVL-GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSR 170
++ ++G S+P + T V G LLL+AL GF+ VV +G + + + I+ ++ + +
Sbjct: 81 GAEGAERGGDHDSRPALGTAAVPEGELLLQALNGFVLVVTSEGLIFYSSHTIQDYLGFHQ 140
Query: 171 QEVLGKSVYNLIHHGDHARFHNCL 194
+V+ +S++ LIH DH F L
Sbjct: 141 TDVMHQSIFKLIHTEDHQEFRRNL 164
>gi|595798|gb|AAA61732.1| Arnt [Mus musculus]
Length = 771
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 75/130 (57%), Gaps = 15/130 (11%)
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSDAVQ 117
RR + YI EL++++ + S+LA KPDK IL+ V+ +++++ TS+D
Sbjct: 81 RRNKMTAYITELSDMV------PTCSALARKPDKLTILRMAVSHMKSLRGTGNTSTDG-- 132
Query: 118 QGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGK 176
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E G
Sbjct: 133 -----SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGS 187
Query: 177 SVYNLIHHGD 186
++Y+ +H D
Sbjct: 188 TLYDQVHPDD 197
>gi|350423284|ref|XP_003493431.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Bombus
impatiens]
Length = 733
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL ++S+ + K DK +L+ T+ ++N + S
Sbjct: 34 LSEKKRRDQFNMLVNELGSMVSSNT---------RKMDKSTVLKSTILFLKNHNEIAVRS 84
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E KP+ ++NE L+LEAL+GF+ V + G + + +E++ S + Y E+
Sbjct: 85 RVHEIQE--DWKPSFLSNEEFTHLILEALDGFIMVFSSSGRIYYVSESVTSLLGYLPNEL 142
Query: 174 LGKSVYNLIHHGDHARFHNCLV 195
++Y++ + D + +N L+
Sbjct: 143 ENTTIYDITYQEDQSPLYNVLL 164
>gi|221041476|dbj|BAH12415.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 79 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 133 SNYG------PSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDFLHPKDVAK 201
>gi|345791952|ref|XP_543750.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Canis lupus familiaris]
Length = 1066
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 79/146 (54%), Gaps = 15/146 (10%)
Query: 45 ILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR 104
+L+E +Q EKRRR++ NN IEEL+ +I + + K DK +L+ V ++
Sbjct: 538 LLREAHSQ--TEKRRRDKMNNLIEELSAMIP------QCNPVPRKLDKLTVLRMAVQHLK 589
Query: 105 NIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIK 163
++K +S + +P+ I + L L+L+ EGFLFVV + G + F ++++
Sbjct: 590 SLKGMTSSYAG------DNYRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVS 643
Query: 164 SFIRYSRQEVLGKSVYNLIHHGDHAR 189
+ Y + + G+S+++ +H D A+
Sbjct: 644 KILNYDQASLTGRSLFDFLHPKDVAK 669
>gi|121945613|dbj|BAF44540.1| circadian transcription modulator CYCLE [Dianemobius
nigrofasciatus]
Length = 601
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 13/131 (9%)
Query: 60 REQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQG 119
R++ N YI EL+ ++ +++ K DK +L+ V ++ I+ AV
Sbjct: 22 RDKMNTYITELSAMVPMCH------AMSRKLDKLTVLRMAVQHLKTIR------GAVHSY 69
Query: 120 EVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSV 178
KP ++++ L L+L+A EGFLFVV D G + + +E++ + YS+ ++LG+S
Sbjct: 70 TEGHYKPAFLSDQELKTLILQAAEGFLFVVGCDRGRILYVSESVSQVLSYSQGDLLGQSW 129
Query: 179 YNLIHHGDHAR 189
++++H D A+
Sbjct: 130 FDILHPKDVAK 140
>gi|168267286|dbj|BAG09699.1| aryl hydrocarbon receptor nuclear translocator 2 [synthetic
construct]
Length = 706
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+R+R + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 61 ERRKRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 168
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 169 GSTLYEQVHPDD 180
>gi|154147739|ref|NP_001093686.1| aryl-hydrocarbon receptor nuclear translocator 2 [Xenopus
(Silurana) tropicalis]
gi|134025837|gb|AAI36117.1| arnt2 protein [Xenopus (Silurana) tropicalis]
Length = 715
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 15/133 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S+D
Sbjct: 71 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 124
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 G-------AYKPSFLTEQELKHLILEAADGFLFVVASETGRVIYVSDSVTPVLNQPQSEW 177
Query: 174 LGKSVYNLIHHGD 186
G ++Y H D
Sbjct: 178 FGSTLYEQTHPDD 190
>gi|40788209|dbj|BAA20766.2| KIAA0307 [Homo sapiens]
Length = 716
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+R+R + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 71 ERRKRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 124
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 ------GAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 178
Query: 175 GKSVYNLIHHGD 186
G ++Y +H D
Sbjct: 179 GSTLYEQVHPDD 190
>gi|307200819|gb|EFN80872.1| Nuclear receptor coactivator 1 [Harpegnathos saltator]
Length = 115
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 6/58 (10%)
Query: 47 QETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR 104
Q +N+CLNEKRRR QEN YI+ELAELIS+ + K DKC ILQ TV+Q+R
Sbjct: 20 QSQINKCLNEKRRRTQENLYIDELAELISSTDMSSG------KTDKCQILQRTVDQVR 71
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 35/51 (68%), Gaps = 6/51 (11%)
Query: 2 KCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 52
KCLNEKRRR QEN YI+ELAELIS+ + K DKC ILQ TV+Q
Sbjct: 25 KCLNEKRRRTQENLYIDELAELISSTDMSSG------KTDKCQILQRTVDQ 69
>gi|113204808|gb|ABI34137.1| CLOCK1a [Oncorhynchus tshawytscha]
Length = 746
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ- 108
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ +R K+
Sbjct: 26 VSRNKSEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLRKHKEI 76
Query: 109 --QETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
Q SS+ Q KP ++NE L+LEAL+GF + DG + + +E++ S +
Sbjct: 77 AAQSESSEIRQDW-----KPPFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTSLL 131
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+ +++ +++ N + G+H+ + L SSH
Sbjct: 132 EHLPSDLVDQNLLNFLPLGEHSDVYKAL--SSH 162
>gi|113204806|gb|ABI34136.1| CLOCK1a [Oncorhynchus tshawytscha]
Length = 721
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ- 108
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ +R K+
Sbjct: 1 VSRNKSEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLRKHKEI 51
Query: 109 --QETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
Q SS+ Q KP ++NE L+LEAL+GF + DG + + +E++ S +
Sbjct: 52 AAQSESSEIRQDW-----KPPFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTSLL 106
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+ +++ +++ N + G+H+ + L SSH
Sbjct: 107 EHLPSDLVDQNLLNFLPLGEHSDVYKAL--SSH 137
>gi|340382797|ref|XP_003389904.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator homolog
[Amphimedon queenslandica]
Length = 627
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 15/136 (11%)
Query: 52 QCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQET 111
C EKRRRE+ N Y+ ELA++I A +++ K DK +IL+ V+ ++N++
Sbjct: 72 HCEVEKRRREKMNRYMSELAQMIPAC------NAVPRKLDKLSILKMAVDHMKNLRGDPH 125
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSR 170
+ S KP +T++ L L++EA GF+ +++ D V F ++ I +
Sbjct: 126 CN--------SDYKPGFLTDDELKQLVVEAANGFMMIISCDKACVLFVSDTISDVLHEPA 177
Query: 171 QEVLGKSVYNLIHHGD 186
+ +G ++Y+L+H D
Sbjct: 178 ENWIGSTLYDLLHPKD 193
>gi|284813602|ref|NP_001165410.1| aryl hydrocarbon receptor nuclear translocator 2b [Xenopus laevis]
gi|37499104|gb|AAQ91608.1| aryl-hydrocarbon receptor nuclear translocator 2 [Xenopus laevis]
Length = 715
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 71 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 124
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 ------GAYKPSFLTEQELKHLILEAADGFLFVVATETGRVIYVSDSVTPVLNQPQSEWF 178
Query: 175 GKSVYNLIHHGD 186
G ++Y H D
Sbjct: 179 GSTLYEHTHPDD 190
>gi|390370839|ref|XP_791998.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 1-like, partial [Strongylocentrotus purpuratus]
Length = 424
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 74/124 (59%), Gaps = 13/124 (10%)
Query: 64 NNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSS 123
N YI+EL+ ++ S SMSS K DK IL+ V ++ ++ +S ++
Sbjct: 2 NTYIQELSAMVPTCS---SMSS---KLDKLTILRMAVQHMKTLRGASSSRKE------AN 49
Query: 124 SKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLI 182
KP+ ++ + L PL+LEA EGFLFVV+ D G V + +E++ + + + + ++G+S+++++
Sbjct: 50 YKPSFLSEDDLNPLILEAAEGFLFVVSCDRGRVLYVSESVLNVLNITWERLIGQSLFDIL 109
Query: 183 HHGD 186
H D
Sbjct: 110 HPKD 113
>gi|82697061|gb|AAI08967.1| Arntl2 protein [Mus musculus]
Length = 578
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N+ I++L+ +I A K DK ++L+ V +R+++
Sbjct: 57 EKRRRDKMNHLIQKLSSMIPP------HIPTAHKLDKLSVLRRAVQYLRSLRGMT----E 106
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ GE +SKP+ I ++ L L+L+A EGFLFVV + G + + ++++ +RY + ++
Sbjct: 107 LYLGE--NSKPSFIQDKELSHLILKAAEGFLFVVGCERGRIFYVSKSVSKTLRYDQASLM 164
Query: 175 GKSVYNLIHHGDHAR 189
G+++++ +H D A+
Sbjct: 165 GQNLFDFLHPKDVAK 179
>gi|327273517|ref|XP_003221527.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Anolis carolinensis]
Length = 602
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 78/135 (57%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ TV ++++K +S
Sbjct: 79 EKRRRDKMNNLIEELSAMIPQC------NPVARKLDKLTVLRMTVQHLKSLKSSNSSYSE 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP+ + + L L+L+A +GFLFVV D G + F +E++ + + Y ++
Sbjct: 133 IRY------KPSFLQDSELQHLILKAADGFLFVVGCDRGRILFVSESVSAILHYDPASLI 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDYLHPKDVAK 201
>gi|339245879|ref|XP_003374573.1| conserved hypothetical protein [Trichinella spiralis]
gi|316972170|gb|EFV55858.1| conserved hypothetical protein [Trichinella spiralis]
Length = 1049
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 97/183 (53%), Gaps = 18/183 (9%)
Query: 61 EQENNYIEELAELI--SAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQ 118
+Q++ Y EL EL+ + S +S+ S + ++ ++QE V +++E + +Q
Sbjct: 128 QQKSQYFSELVELLQENLCSTNDSVDSGVLCSNR-QLVQEVVQHWN--REKEKKENIIQH 184
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
G+VSS+ ++ + + GP+LL L+ F FV+N +G + + ++N+ ++++ + ++L + +
Sbjct: 185 GDVSSTALSLSASHI-GPILLGVLDSFFFVMNTEGLIEYISDNVVKYLKFHQSDMLNQPI 243
Query: 179 YNLIHHGDHARFHNCLVPSSHQVN----AWTSDSGGQAGKRPSLTASTPNRTFNIRLLIS 234
+ + + D F L+P S N A+ +D G KR S RTF R LI
Sbjct: 244 FKFVSNADRPLFEQ-LLPDSLAFNLFNFAFPTDVVGFEKKRQS-------RTFCCRFLIK 295
Query: 235 STH 237
++
Sbjct: 296 DSN 298
>gi|301763481|ref|XP_002917162.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Ailuropoda melanoleuca]
Length = 692
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 174 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYAG 227
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ +P+ I + L L+L+ EGFLFVV + G F ++++ + Y + +
Sbjct: 228 ------DNYRPSFIQDNELRHLILKTAEGFLFVVGCERGKFLFVSKSVSKILNYDQASLT 281
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 282 GQSLFDFLHPKDVAK 296
>gi|281352847|gb|EFB28431.1| hypothetical protein PANDA_005354 [Ailuropoda melanoleuca]
Length = 621
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 103 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGMTNSYAG 156
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ +P+ I + L L+L+ EGFLFVV + G F ++++ + Y + +
Sbjct: 157 ------DNYRPSFIQDNELRHLILKTAEGFLFVVGCERGKFLFVSKSVSKILNYDQASLT 210
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 211 GQSLFDFLHPKDVAK 225
>gi|30089690|ref|NP_835740.1| single-minded homolog 1-A [Danio rerio]
gi|82111460|sp|Q98SJ5.1|SIM1A_DANRE RecName: Full=Single-minded homolog 1-A
gi|13506717|gb|AAK27261.1| single-minded 1 [Danio rerio]
Length = 745
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S S S DK +I++ T + ++ I E ++
Sbjct: 10 RTRREKENSEFYELAKLLPLPSAITSQS------DKASIIRLTTSYLKMRIVFPEGLGES 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G VS + LG LL+ L+GF+FVV PDG + + +E + S++E+ G
Sbjct: 64 --WGHVSRTTSLENVGRELGSHLLQTLDGFIFVVAPDGKILYISETASVHLGLSQEELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|302745168|gb|ADL62687.1| clock 2, partial [Phreatichthys andruzzii]
Length = 807
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 79/149 (53%), Gaps = 15/149 (10%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ--QETS 112
+EK+RR+Q N I+EL ++ M DK ILQ T++ ++ K+ +T
Sbjct: 15 SEKKRRDQFNVLIKELCTMLQGQGHPRKM-------DKSTILQRTIDFLQKQKEITAQTE 67
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
S V+Q KP+ ++NE L+LEAL+GFL + DG + + ++++ S I + +
Sbjct: 68 SCEVRQ----DWKPSFLSNEEFTQLMLEALDGFLIALTTDGNIIYVSDSVSSLIGHLPSD 123
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQV 201
++ +++ N + +H + L SSH +
Sbjct: 124 MVDQNILNFLPEREHGEVYKLL--SSHML 150
>gi|332018235|gb|EGI58840.1| Aryl hydrocarbon receptor nuclear translocator-like protein
[Acromyrmex echinatior]
Length = 612
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 72/123 (58%), Gaps = 15/123 (12%)
Query: 66 YIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSDAVQQGEVSSS 124
YI EL++++ + S+LA KPDK IL+ V ++ ++ TS+D ++
Sbjct: 4 YITELSDMV------PTCSALARKPDKLTILRMAVAHMKALRGTGNTSTD-------NAY 50
Query: 125 KPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIH 183
KP+ +T++ L L+LEA +GFLFVV+ D G + + ++++ + Y++ + G S+Y +H
Sbjct: 51 KPSFLTDQELKHLILEAADGFLFVVSCDSGRIIYVSDSVAPVLNYTQSDWFGTSLYQQVH 110
Query: 184 HGD 186
D
Sbjct: 111 PDD 113
>gi|147903135|ref|NP_001080540.1| aryl-hydrocarbon receptor nuclear translocator 2 [Xenopus laevis]
gi|28278683|gb|AAH44268.1| Arnt2-prov protein [Xenopus laevis]
Length = 668
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 60 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKSTD 113
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 114 ------GAYKPSFLTEQELKHLILEAADGFLFVVASETGRVIYVSDSVTPVLNQPQSEWF 167
Query: 175 GKSVYNLIHHGD 186
G ++Y H D
Sbjct: 168 GSNLYEHTHPDD 179
>gi|355669555|gb|AER94566.1| aryl hydrocarbon receptor nuclear translocator-like 2 [Mustela
putorius furo]
Length = 576
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V ++++K S
Sbjct: 92 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLKSLKGMTNSYAG 145
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 146 ------GNYRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 199
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 200 GQSLFDFLHPKDVAK 214
>gi|432942116|ref|XP_004082967.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Oryzias latipes]
Length = 620
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN I+EL+ +I A +A K DK +L++ V ++++K + + A
Sbjct: 83 EKRRRDKMNNLIDELSAMIPAC------QPMARKLDKLTVLRKAVQYLKSLKAGASGAFA 136
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
S+ KP+++ + L LLL GFL VV D + F +E++ + +S+ ++
Sbjct: 137 -----DSTCKPSLLPQDDLWHLLLRTANGFLLVVRCDRAKILFISESVSKILNFSQLDLT 191
Query: 175 GKSVYNLIHHGD 186
G+S+++ +H D
Sbjct: 192 GQSLFDFLHPKD 203
>gi|85726135|gb|ABC79590.1| BMAL2 [Mus musculus]
Length = 570
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N+ I++L+ +I A K DK ++L+ V +R+++
Sbjct: 57 EKRRRDKMNHLIQKLSSMIPP------HIPTAHKLDKLSVLRRAVQYLRSLRGMT----E 106
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ GE +SKP+ I ++ L L+L+A EGFLFVV + G + + ++++ +RY + ++
Sbjct: 107 LYLGE--NSKPSFIQDKELSHLILKAAEGFLFVVGCERGRIFYVSKSVSKTLRYDQASLI 164
Query: 175 GKSVYNLIHHGDHAR 189
G+++++ +H D A+
Sbjct: 165 GQNLFDFLHPKDVAK 179
>gi|80474742|gb|AAI08966.1| Arntl2 protein [Mus musculus]
Length = 579
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N+ I++L+ +I A K DK ++L+ V +R+++
Sbjct: 57 EKRRRDKMNHLIQKLSSMIPP------HIPTAHKLDKLSVLRRAVQYLRSLR----GMTE 106
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ GE +SKP+ I ++ L L+L+A EGFLFVV + G + + ++++ +RY + ++
Sbjct: 107 LYLGE--NSKPSFIQDKELSHLILKAAEGFLFVVGCERGRIFYVSKSVSKTLRYDQASLM 164
Query: 175 GKSVYNLIHHGDHAR 189
G+++++ +H D A+
Sbjct: 165 GQNLFDFLHPKDVAK 179
>gi|391337762|ref|XP_003743234.1| PREDICTED: neuronal PAS domain-containing protein 2-like
[Metaseiulus occidentalis]
Length = 386
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 11/148 (7%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE 110
N+ +EK+RR+ NN I EL+ +++ +S K DK ++LQ T+ ++N K
Sbjct: 16 NRNSSEKKRRDVFNNLINELSSMVTRSS---------RKMDKGSVLQATIAYLKNYKDTP 66
Query: 111 TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSR 170
+D +Q S P +T ++LE + F ++ G++ + ++ I S + Y
Sbjct: 67 -PNDVAEQSLDRSWFPDSLTQSEFNRIMLEGQDAFTICISFKGHILYVSDAIASILGYVP 125
Query: 171 QEVLGKSVYNLIHHGDHARFHNCLVPSS 198
Q L +++N++H DHA+ H+ L +S
Sbjct: 126 Q-YLRSAIFNIVHEDDHAKAHSLLKTAS 152
>gi|209418766|gb|ACI46598.1| clock-2a protein [Haplochromis burtoni]
Length = 431
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 17/150 (11%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQI---RNIKQQET 111
+EK+RR+Q N I+EL ++ M DK ILQ T++ + ++I Q
Sbjct: 48 SEKKRRDQFNVLIKELCTMLQGQGHPRKM-------DKSTILQRTIDFLQKQKDITAQND 100
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D Q KP+ ++NE L+LEAL+GFL + DG + + ++++ S I +
Sbjct: 101 TCDVRQDW-----KPSFLSNEEFTQLMLEALDGFLVALTTDGNIIYVSDSVSSLIGHLPS 155
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQV 201
+++ +++ N + +H + L SSH +
Sbjct: 156 DMVDQNILNFLPEREHGEVYKLL--SSHML 183
>gi|297691460|ref|XP_002823104.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 5 [Pongo abelii]
Length = 540
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 79 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 133 ------NNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDFLHPKDVAK 201
>gi|157821739|ref|NP_001101111.1| single-minded homolog 1 [Rattus norvegicus]
gi|149046904|gb|EDL99652.1| single-minded 1 (predicted) [Rattus norvegicus]
Length = 765
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHTSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|338713871|ref|XP_001915018.2| PREDICTED: LOW QUALITY PROTEIN: neuronal PAS domain-containing
protein 2-like [Equus caballus]
Length = 875
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 79/149 (53%), Gaps = 17/149 (11%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVN--QIRNIKQQETS 112
+EK+RR+Q N I+EL+ ++ + K DK +L++ + Q N +T
Sbjct: 74 SEKKRRDQFNVLIKELSSMLPGNT---------RKMDKTTVLEKVIGFLQKHNEVSAQTE 124
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
+ VQQ KP+ ++NE L+LEAL+GF+ V PDG + + +++I + + +
Sbjct: 125 TCDVQQDW----KPSFLSNEEFTQLMLEALDGFIIAVTPDGSILYVSDSITPLLGHLPSD 180
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQV 201
V+ +++ N + +H+ + L SSH +
Sbjct: 181 VMDQNLLNFLPEQEHSEVYKML--SSHML 207
>gi|26986633|ref|NP_758513.1| aryl hydrocarbon receptor nuclear translocator-like protein 2 [Mus
musculus]
gi|124007122|sp|Q2VPD4.2|BMAL2_MOUSE RecName: Full=Aryl hydrocarbon receptor nuclear translocator-like
protein 2; AltName: Full=Brain and muscle ARNT-like 2
gi|15147211|gb|AAF88141.1| brain-muscle-ARNT-like protein 2a [Mus musculus]
Length = 579
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N+ I++L+ +I A K DK ++L+ V +R+++
Sbjct: 57 EKRRRDKMNHLIQKLSSMIPP------HIPTAHKLDKLSVLRRAVQYLRSLRGMT----E 106
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ GE +SKP+ I ++ L L+L+A EGFLFVV + G + + ++++ +RY + ++
Sbjct: 107 LYLGE--NSKPSFIQDKELSHLILKAAEGFLFVVGCERGRIFYVSKSVSKTLRYDQASLI 164
Query: 175 GKSVYNLIHHGDHAR 189
G+++++ +H D A+
Sbjct: 165 GQNLFDFLHPKDVAK 179
>gi|153945860|ref|NP_035506.2| single-minded homolog 1 [Mus musculus]
gi|6175033|sp|Q61045.3|SIM1_MOUSE RecName: Full=Single-minded homolog 1; Short=mSIM1
gi|1651193|dbj|BAA11467.1| mSim1 [Mus musculus]
gi|3138809|dbj|BAA28270.1| mSim1 [Mus musculus]
gi|148673108|gb|EDL05055.1| single-minded homolog 1 (Drosophila) [Mus musculus]
gi|182887925|gb|AAI60194.1| Single-minded homolog 1 (Drosophila) [synthetic construct]
Length = 765
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHTSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|345313905|ref|XP_003429440.1| PREDICTED: nuclear receptor coactivator 2-like [Ornithorhynchus
anatinus]
Length = 114
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV +IR IK+Q
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKRIRQIKEQ 86
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 52
EKR REQEN YIEELAELI A+F + + + KPDKCAIL+ETV +
Sbjct: 35 EKRNREQENKYIEELAELI-FANFND-IDNFNFKPDKCAILKETVKR 79
>gi|297691456|ref|XP_002823102.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 3 [Pongo abelii]
Length = 636
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 116 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 169
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 170 ------NNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 223
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 224 GQSLFDFLHPKDVAK 238
>gi|84043189|gb|ABC50103.1| BMAL2 [Mus musculus]
Length = 569
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N+ I++L+ +I A K DK ++L+ V +R+++
Sbjct: 57 EKRRRDKMNHLIQKLSSMIPP------HIPTAHKLDKLSVLRRAVQYLRSLRGMT----E 106
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ GE +SKP+ I ++ L L+L+A EGFLFVV + G + + ++++ +RY + ++
Sbjct: 107 LYLGE--NSKPSFIQDKELSHLILKAAEGFLFVVGCERGRIFYVSKSVSKTLRYDQASLI 164
Query: 175 GKSVYNLIHHGDHAR 189
G+++++ +H D A+
Sbjct: 165 GQNLFDFLHPRDVAK 179
>gi|297691454|ref|XP_002823101.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 2 [Pongo abelii]
Length = 588
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 68 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 121
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 122 ------NNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDFLHPKDVAK 190
>gi|297691452|ref|XP_002823100.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 1 [Pongo abelii]
Length = 599
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 79 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 133 ------NNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 186
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 187 GQSLFDFLHPKDVAK 201
>gi|354504925|ref|XP_003514523.1| PREDICTED: single-minded homolog 1 [Cricetulus griseus]
gi|344258879|gb|EGW14983.1| Single-minded-like 1 [Cricetulus griseus]
Length = 765
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHTSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|297691458|ref|XP_002823103.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
isoform 4 [Pongo abelii]
Length = 622
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 102 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 155
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 156 ------NNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 209
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 210 GQSLFDFLHPKDVAK 224
>gi|5163456|gb|AAD40677.1| ARNT protein [Stenotomus chrysops]
Length = 346
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 66 YIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSDAVQQGEVSSS 124
YI EL++++ S +LA KPDK IL+ V+ +++++ T++D S
Sbjct: 5 YITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGSGNTNADG-------SY 51
Query: 125 KPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIH 183
KP+ +T++ L L+LEA +GFLFVV+ + G + + ++++ + S+ E LG S+Y+ +H
Sbjct: 52 KPSFLTDQELKHLILEAADGFLFVVSCETGRIVYVSDSLTPVLNQSQSEWLGSSLYDQLH 111
Query: 184 HGD 186
D
Sbjct: 112 PDD 114
>gi|15147213|gb|AAK12619.1| brain-muscle-ARNT-like protein 2b [Mus musculus]
Length = 199
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 79/140 (56%), Gaps = 13/140 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N+ I++L+ +I A K DK ++L+ V +R+++
Sbjct: 57 EKRRRDKMNHLIQKLSSMIPPHI------PTAHKLDKLSVLRRAVQYLRSLR----GMTE 106
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEVL 174
+ GE +SKP+ I ++ L L+L+A EGFLFVV G + + ++++ +RY + ++
Sbjct: 107 LYLGE--NSKPSFIQDKELSHLILKAAEGFLFVVGCERGRIFYVSKSVSKTLRYDQASLI 164
Query: 175 GKSVYNLIHHGDHARFHNCL 194
G+++++ +H D A+ L
Sbjct: 165 GQNLFDFLHPKDVAKVKEQL 184
>gi|427783731|gb|JAA57317.1| Putative neuronal pas domain-containing protein 2 [Rhipicephalus
pulchellus]
Length = 482
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 84/159 (52%), Gaps = 15/159 (9%)
Query: 40 PDKCAILQET--VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQ 97
P CA+ + + + EK+RR++ N+YI ELA ++ S A + DK +IL+
Sbjct: 20 PLACAMESSSSRMQRNFAEKQRRDKLNSYINELANIVPMVSMASK------RLDKTSILR 73
Query: 98 ETVNQIRNIKQQETSSDAVQQGEVSSSK--PTVITNEVLGPLLLEALEGFLFVVNPDGYV 155
+ +R + + A ++G+V+ +K P ++ + L LL E ++GF+ V + G +
Sbjct: 74 LSAAHLRFYQ----TPLASERGKVTKTKWRPKFLSTDHLKDLL-EVVDGFVLVTSTTGKI 128
Query: 156 NFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCL 194
+ + +++ F+ + E++G S++ +H D H+C
Sbjct: 129 IYISPSVERFLGHQNIEMIGHSIFTFLHSADVQAVHDCF 167
>gi|332232982|ref|XP_003265683.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 3 [Nomascus leucogenys]
Length = 622
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 102 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 155
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 156 ------NNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 209
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 210 GQSLFDFLHPKDVAK 224
>gi|380714580|dbj|BAL72807.1| clock, partial [Anthrenus verbasci]
Length = 294
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 123/285 (43%), Gaps = 37/285 (12%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
K+RR+Q N + EL+ +++ S K DK +L+ T++ ++N + S A
Sbjct: 1 KKRRDQFNLLVSELSSMVATGS---------RKMDKSTVLKSTISFLKNHNEIAVRSRAN 51
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
+ E KPT +TNE L+LEA++GF+ V + G + + +E+I S + + EVL
Sbjct: 52 EIQE--DWKPTFLTNEEFTHLVLEAVDGFIMVFSASGTIFYASESITSLLGHLPDEVLNM 109
Query: 177 SVYNLIHHGDHARFHNCLV-PSSHQVNAWTS---DSGGQAGKRPSLTASTPNRTFNIRLL 232
++Y + + + ++ L+ P+ V S GG K P F
Sbjct: 110 TIYEMACEEEQSNIYSILMSPTEDDVQVSFSCHLRRGGPDSKPPYCYELV---HFVGYFR 166
Query: 233 ISSTHLTAGLSRAGGENGQDDSGDVSSEGG----PCLMCVARRIPPTDKQLSA-----PI 283
+ + +R G +G+ D+ V G P L+ R +P D S +
Sbjct: 167 SDEDMVQSDSNRYSGYSGEADTRLVFVGTGRLQTPQLI---REMPLVDSTKSEFTSRHSL 223
Query: 284 EQFTMKLD-RSGTIIG------MDTSGVSQTHTQYLNKAVACKTS 321
E + LD R+ IIG + TSG H L K V C S
Sbjct: 224 EWKFLFLDHRAPPIIGYLPFELLGTSGYDYYHVDDLEKVVKCHES 268
>gi|332232978|ref|XP_003265681.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 1 [Nomascus leucogenys]
Length = 588
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 68 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 121
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 122 ------NNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDFLHPKDVAK 190
>gi|426226939|ref|XP_004007590.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 [Ovis aries]
Length = 638
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 73/132 (55%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN I +L+ +I S +A K DK +L+ V +R++K +S
Sbjct: 119 EKRRRDKMNNLIGKLSTMIPQCS------PMARKLDKLTVLRMAVQHLRSLKGMTSSYPG 172
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + ++
Sbjct: 173 ------NNYRPSFIHDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLI 226
Query: 175 GKSVYNLIHHGD 186
G+S+++ +H D
Sbjct: 227 GQSLFDFLHPKD 238
>gi|55730495|emb|CAH91969.1| hypothetical protein [Pongo abelii]
Length = 576
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|395851422|ref|XP_003798255.1| PREDICTED: single-minded homolog 1 [Otolemur garnettii]
Length = 766
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|351705699|gb|EHB08618.1| Single-minded-like protein 1 [Heterocephalus glaber]
Length = 754
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|332232980|ref|XP_003265682.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 isoform 2 [Nomascus leucogenys]
Length = 636
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 116 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLRSLKGLTNSYVG 169
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 170 ------NNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 223
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 224 GQSLFDFLHPKDVAK 238
>gi|8489853|gb|AAF75783.1| clock protein [Oncorhynchus mykiss]
Length = 299
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 19/159 (11%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ- 108
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ +R K+
Sbjct: 21 VSRNKSEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLRKHKEI 71
Query: 109 --QETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
Q SS+ Q KP ++NE L+LEAL+GF + DG + + +E++ S +
Sbjct: 72 AAQSESSEIRQDW-----KPPFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTSLL 126
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWT 205
+ +++ +++ N + G+H+ + L SSH + T
Sbjct: 127 EHLPSDLVDQNLLNFLPLGEHSDVYKAL--SSHILEGET 163
>gi|322797493|gb|EFZ19548.1| hypothetical protein SINV_08123 [Solenopsis invicta]
Length = 89
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 136 PLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCL 194
P++ L GFLF+VN GY+ + +NI FI Y++ +VLGK +YN+IHHGD+ F + L
Sbjct: 13 PMIKMILHGFLFIVNTKGYMVY--DNITQFINYTKDDVLGKDIYNIIHHGDYNTFMSSL 69
>gi|348534841|ref|XP_003454910.1| PREDICTED: single-minded homolog 1-A-like [Oreochromis niloticus]
Length = 754
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ ++
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLK-MRVVFPEGLGE 62
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
G VS S ++ LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 63 SWGHVSRSSSLDGLSQELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGN 122
Query: 177 SVYNLIHHGDH 187
S+Y IH DH
Sbjct: 123 SIYEYIHPADH 133
>gi|348560534|ref|XP_003466068.1| PREDICTED: single-minded homolog 1-like [Cavia porcellus]
Length = 767
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|348504866|ref|XP_003439982.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Oreochromis niloticus]
Length = 871
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ + K+
Sbjct: 28 VSRNKSEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLHKHKEI 78
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
S++ E+ KP ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 79 AAQSEST---EIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMADGNIIYVSESVTSLLEH 135
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +++ N + G+H+ + L SSH
Sbjct: 136 LPSDLVDQNLLNFLPVGEHSEVYKAL--SSH 164
>gi|170031078|ref|XP_001843414.1| circadian locomoter output cycles kaput protein [Culex
quinquefasciatus]
gi|167868894|gb|EDS32277.1| circadian locomoter output cycles kaput protein [Culex
quinquefasciatus]
Length = 344
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 79/143 (55%), Gaps = 13/143 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N + EL+ ++S+ S K DK +L+ T+ +++ + S
Sbjct: 61 LSEKKRRDQFNLLVNELSSMVSSNS---------RKMDKSTVLKSTIAFLKSHNEIAVRS 111
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
+ E+ + KP+ ++NE L+LEAL+GF+ V + G V + +E+I S + + +
Sbjct: 112 ---RVHEIQTDWKPSFLSNEEFTHLILEALDGFIIVFSSTGRVFYASESITSLLGHLPSD 168
Query: 173 VLGKSVYNLIHHGDHARFHNCLV 195
+ +VY++++ D +N L+
Sbjct: 169 LSNMTVYDMVYEDDQNDLYNILL 191
>gi|145881077|gb|ABP97104.1| Clock [Haplochromis burtoni]
Length = 872
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ + K+
Sbjct: 28 VSRNKSEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLHKHKEI 78
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
S++ E+ KP ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 79 AAQSEST---EIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMADGNIIYVSESVTSLLEH 135
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +++ N + G+H+ + L SSH
Sbjct: 136 LPSDLVDQNLLNFLPVGEHSEVYKAL--SSH 164
>gi|47219337|emb|CAG10966.1| unnamed protein product [Tetraodon nigroviridis]
Length = 885
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ + K+
Sbjct: 29 VSRNKSEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLHKHKEI 79
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
S++ E+ KP ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 80 AAQSEST---EIRPDWKPPFLSNEEFTQLMLEALDGFFLAIMTDGNIIYASESVTSLLEH 136
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +++ N + G+H+ + L SSH
Sbjct: 137 LPSDLVDQNLLNFLPAGEHSEVYKAL--SSH 165
>gi|300794523|ref|NP_001179901.1| single-minded homolog 1 [Bos taurus]
Length = 766
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|350584322|ref|XP_003355586.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2-like [Sus scrofa]
Length = 725
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IE L+ +I +A K DK +L+ V +R++K S
Sbjct: 220 EKRRRDKMNNLIETLSAMIPQCH------PVARKLDKLTVLRMAVQHLRSLKGMANSYMG 273
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 274 ------NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKIIFISKSVSKILNYDQASLT 327
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 328 GQSLFDFLHPKDVAK 342
>gi|149722832|ref|XP_001503954.1| PREDICTED: single-minded homolog 1 [Equus caballus]
Length = 766
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|432110122|gb|ELK33901.1| Aryl hydrocarbon receptor nuclear translocator-like protein 2
[Myotis davidii]
Length = 634
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N+ IEEL+ +I +A K DK +L+ V ++++K S
Sbjct: 45 EKRRRDKMNSLIEELSAMIPQC------KPMARKLDKLTVLRMAVQHLKSLKGMRNS--- 95
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 96 -YAGDI--YRPSFIQDNELRHLVLKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 152
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 153 GQSLFDFLHPKDVAK 167
>gi|296484106|tpg|DAA26221.1| TPA: single-minded homolog 1 [Bos taurus]
Length = 766
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|297747308|ref|NP_001166056.2| single-minded homolog 1 [Sus scrofa]
gi|297655327|gb|ADC53306.2| single-minded 1 protein [Sus scrofa]
Length = 766
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|440900235|gb|ELR51420.1| Single-minded-like protein 1 [Bos grunniens mutus]
Length = 766
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|426234631|ref|XP_004011296.1| PREDICTED: single-minded homolog 1 [Ovis aries]
Length = 769
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|403261071|ref|XP_003922958.1| PREDICTED: single-minded homolog 1 [Saimiri boliviensis
boliviensis]
Length = 766
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|209418764|gb|ACI46597.1| clock-1a protein [Haplochromis burtoni]
Length = 864
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ + K+
Sbjct: 28 VSRNKSEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLHKHKEI 78
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
S++ E+ KP ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 79 AAQSEST---EIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMADGNIIYVSESVTSLLEH 135
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +++ N + G+H+ + L SSH
Sbjct: 136 LPSDLVDQNLLNFLPVGEHSEVYKAL--SSH 164
>gi|125490345|ref|NP_001074957.1| single-minded homolog 1 [Pan troglodytes]
gi|146325729|sp|A2T6X9.1|SIM1_PANTR RecName: Full=Single-minded homolog 1
gi|124111115|gb|ABM91934.1| SIM1 [Pan troglodytes]
Length = 766
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|109072171|ref|XP_001086054.1| PREDICTED: single-minded homolog 1 [Macaca mulatta]
Length = 766
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|296198859|ref|XP_002746908.1| PREDICTED: single-minded homolog 1 [Callithrix jacchus]
Length = 766
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|291396685|ref|XP_002714792.1| PREDICTED: single-minded homolog 1-like [Oryctolagus cuniculus]
Length = 766
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|195379048|ref|XP_002048293.1| GJ11427 [Drosophila virilis]
gi|194155451|gb|EDW70635.1| GJ11427 [Drosophila virilis]
Length = 988
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LI+ ++ K DK +L+ T++ +R+ + ++
Sbjct: 18 LSEKKRRDQFNSLVNDLSGLITTSN---------RKMDKSTVLKSTISFLRHHNE---AT 65
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KPT +TN+ L+LE+L+ F+ V N G V + +E++ S + Y E
Sbjct: 66 DRSKVFEIEQEWKPTFLTNDEFSHLMLESLDAFMVVFNSVGSVFYASESVASQLGYMPCE 125
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGG 210
+ K+ Y++ + D N + + V +D G
Sbjct: 126 LYSKNFYDVTYELDQEALLNVFLNPAPVVEPHQTDIGA 163
>gi|444725314|gb|ELW65884.1| Single-minded like protein 1 [Tupaia chinensis]
Length = 766
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|344264587|ref|XP_003404373.1| PREDICTED: single-minded homolog 1 [Loxodonta africana]
Length = 765
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|301773192|ref|XP_002922016.1| PREDICTED: single-minded homolog 1-like [Ailuropoda melanoleuca]
gi|281347050|gb|EFB22634.1| hypothetical protein PANDA_010941 [Ailuropoda melanoleuca]
Length = 766
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|402867751|ref|XP_003897999.1| PREDICTED: single-minded homolog 1 [Papio anubis]
Length = 766
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|397507866|ref|XP_003824402.1| PREDICTED: single-minded homolog 1 [Pan paniscus]
Length = 766
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|355561927|gb|EHH18559.1| hypothetical protein EGK_15194 [Macaca mulatta]
Length = 766
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|297678768|ref|XP_002817234.1| PREDICTED: single-minded homolog 1 [Pongo abelii]
Length = 766
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|21614542|ref|NP_005059.2| single-minded homolog 1 [Homo sapiens]
gi|426354083|ref|XP_004044499.1| PREDICTED: single-minded homolog 1 [Gorilla gorilla gorilla]
gi|109940166|sp|P81133.2|SIM1_HUMAN RecName: Full=Single-minded homolog 1; AltName: Full=Class E basic
helix-loop-helix protein 14; Short=bHLHe14
gi|108752102|gb|AAI11932.1| SIM1 protein [synthetic construct]
gi|110645561|gb|AAI18501.1| SIM1 protein [synthetic construct]
gi|119568836|gb|EAW48451.1| single-minded homolog 1 (Drosophila) [Homo sapiens]
gi|307684428|dbj|BAJ20254.1| single-minded homolog 1 [synthetic construct]
Length = 766
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|355748775|gb|EHH53258.1| hypothetical protein EGM_13864 [Macaca fascicularis]
Length = 766
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|410959734|ref|XP_003986456.1| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 1 [Felis
catus]
Length = 760
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|149640516|ref|XP_001506044.1| PREDICTED: single-minded homolog 1 [Ornithorhynchus anatinus]
Length = 764
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|73973608|ref|XP_539058.2| PREDICTED: single-minded homolog 1 isoform 1 [Canis lupus
familiaris]
Length = 766
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|449271560|gb|EMC81866.1| Single-minded like protein 1 [Columba livia]
Length = 766
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|224048380|ref|XP_002196673.1| PREDICTED: single-minded homolog 1 [Taeniopygia guttata]
Length = 766
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|332218557|ref|XP_003258422.1| PREDICTED: single-minded homolog 1 [Nomascus leucogenys]
Length = 766
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|395839342|ref|XP_003792551.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator-like protein 2 [Otolemur garnettii]
Length = 670
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK ++L+ V ++++K S
Sbjct: 150 EKRRRDKMNNLIEELSAMIPQC------NPVARKLDKLSVLRMAVQHLKSLKGMTDSYVG 203
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 204 ------DNYRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKTLHYDQASLT 257
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 258 GQSLFDFLHPKDVAK 272
>gi|118088683|ref|XP_419817.2| PREDICTED: single-minded homolog 1 [Gallus gallus]
Length = 766
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|390342499|ref|XP_781621.3| PREDICTED: circadian locomoter output cycles protein kaput-like
[Strongylocentrotus purpuratus]
Length = 318
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 78/144 (54%), Gaps = 19/144 (13%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL ++S + K DK A+L+ T++ ++ +D
Sbjct: 38 SEKKRRDQFNVLIQELCSMVSTKT---------RKLDKSAVLRATIHFLK------AHND 82
Query: 115 AVQQGEVSSS----KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSR 170
V + E ++ KP+ ++++ L+LEAL+GF+ V + G++ + ++++ S +R+
Sbjct: 83 MVMKSEKNAINENWKPSFLSDDEFSQLMLEALDGFMIVFSQQGHILYTSDSVISLLRHLP 142
Query: 171 QEVLGKSVYNLIHHGDHARFHNCL 194
+++ ++Y LIH D L
Sbjct: 143 KDLESCTIYELIHEDDRPEMFKIL 166
>gi|26334359|dbj|BAC30897.1| unnamed protein product [Mus musculus]
Length = 148
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 13/120 (10%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKET 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
>gi|307168322|gb|EFN61528.1| Aryl hydrocarbon receptor nuclear translocator-like protein
[Camponotus floridanus]
Length = 612
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 66 YIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSDAVQQGEVSSS 124
YI EL++++ + S+LA KPDK IL+ V ++ ++ T++D ++
Sbjct: 4 YITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTGNTATD-------NAY 50
Query: 125 KPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIH 183
KP+ +T++ L L+LEA +GFLFVV+ D G + + ++++ + Y++ + G S+Y+ +H
Sbjct: 51 KPSFLTDQELKHLILEAADGFLFVVSCDTGRIIYVSDSVAPVLNYTQSDWYGTSLYSQVH 110
Query: 184 HGD 186
D
Sbjct: 111 PDD 113
>gi|326924642|ref|XP_003208534.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Meleagris
gallopavo]
Length = 688
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 128/294 (43%), Gaps = 39/294 (13%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL ++ +K DK ILQ T++ ++ K+ ++
Sbjct: 40 SEKKRRDQFNVLIKELCTMLQGHGHP-------LKMDKSTILQRTIDFLQKQKEITAQTE 92
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
A + + KP+ ++NE L+LEAL+GFL + DG + + ++++ S + + +++
Sbjct: 93 ACEIRQ--DWKPSFLSNEEFTQLMLEALDGFLIALTTDGIIIYVSDSVSSLLGHLPSDLV 150
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGK--------RPSLTASTPNRT 226
+++ N + + + + L P +D + R SL + P
Sbjct: 151 DQNILNFLPEREQSEVYKLLSPHVLMTEPVAADFLNVEKQVEFCCHLARGSLDPNEPLTY 210
Query: 227 FNIRLLISSTHLTAGLSRA--GGENGQDDSGDVSSEGGPCLMCVARRIPPTD-KQL---S 280
++ ++ + T + + G E+ + ++E CL+ R + P K+L
Sbjct: 211 EYVKFVVDFKYFTHVPTPSCNGFESAIARAFRSATEEQICLVATVRLVTPQFLKELCNVE 270
Query: 281 APIEQFTMK---------LD-RSGTIIG------MDTSGVSQTHTQYLNKAVAC 318
P E+FT + LD R+ IIG + TSG H L C
Sbjct: 271 EPCEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARC 324
>gi|307194991|gb|EFN77076.1| Aryl hydrocarbon receptor nuclear translocator-like protein
[Harpegnathos saltator]
Length = 625
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 73/123 (59%), Gaps = 15/123 (12%)
Query: 66 YIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSDAVQQGEVSSS 124
YI EL++++ + S+LA KPDK IL+ V ++ ++ T++D ++
Sbjct: 4 YITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTGNTATD-------NAY 50
Query: 125 KPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIH 183
KP+ +T++ L L+LEA +GFLFVV+ D G + + ++++ + Y++ + G S+Y+ +H
Sbjct: 51 KPSFLTDQELKHLILEAADGFLFVVSCDTGRIIYVSDSVAPVLNYTQSDWYGTSLYSQVH 110
Query: 184 HGD 186
D
Sbjct: 111 PDD 113
>gi|146325728|sp|A1YFY6.1|SIM1_PANPA RecName: Full=Single-minded homolog 1
gi|121483834|gb|ABM54211.1| SIM1 [Pan paniscus]
Length = 766
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSWTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|410920848|ref|XP_003973895.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Takifugu rubripes]
Length = 855
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 15/151 (9%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ + K DK ILQ +++ + K+
Sbjct: 28 VSRNKSEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQNSIDFLHKHKEI 78
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
S++ E+ KP ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 79 AAQSEST---EIRPDWKPPFLSNEEFTQLMLEALDGFFLAIMTDGNIIYASESVTSLLEH 135
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +++ N + G+H+ + L SSH
Sbjct: 136 LPSDLVDQNLLNFLPAGEHSEVYKAL--SSH 164
>gi|405978067|gb|EKC42482.1| Single-minded-like protein 1 [Crassostrea gigas]
Length = 701
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RRE+EN ELA+L+ S ++ + DK +I++ + + K + D +
Sbjct: 10 RTRREKENAEFYELAKLLPLPS------AITSQLDKASIIRLCTSYL---KMRTVFPDGL 60
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
G S P + + LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 61 GDGWGQRSPPRTLLEKELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQIELTGS 120
Query: 177 SVYNLIHHGDH 187
S++ IH DH
Sbjct: 121 SIFEYIHPSDH 131
>gi|431838120|gb|ELK00052.1| Single-minded like protein 1 [Pteropus alecto]
Length = 355
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|283806656|ref|NP_001164574.1| cycle [Acyrthosiphon pisum]
gi|283483352|emb|CAX37106.1| cycle [Acyrthosiphon pisum]
Length = 648
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 78/135 (57%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N+YI ELA +I ++ K DK ++L+ V ++ I+ ++ ++
Sbjct: 76 EKRRRDKMNSYITELASMIPMC------HTMPRKLDKLSVLRMAVQHMKTIR---SNVNS 126
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+G KP+ ++++ L L+ A EGF+ V+ D G + + ++++ ++Y ++++
Sbjct: 127 YTEGHY---KPSFLSDQDLKTLITHAAEGFVLAVSCDHGKILYTSKSVTQVLKYMPEDLV 183
Query: 175 GKSVYNLIHHGDHAR 189
G +V++ IH D A+
Sbjct: 184 GNNVFDYIHPKDVAK 198
>gi|410964061|ref|XP_003988575.1| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator-like protein 2 [Felis catus]
Length = 708
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 13/135 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A + DK +L+ V +R++K +
Sbjct: 104 EKRRRDKMNNLIEELSAMIPQC------NPVARRLDKLTVLRMAVQHVRSLKGMTNTYAG 157
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 158 ------DNYRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKTLNYDQASLT 211
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 212 GQSLFDFLHPKDVAK 226
>gi|339649210|gb|AEJ87226.1| clock [Platynereis dumerilii]
Length = 325
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 81/151 (53%), Gaps = 21/151 (13%)
Query: 61 EQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGE 120
+Q N + EL ++S ++ K DK +L+ T++ +R + +D ++Q +
Sbjct: 1 DQFNMLVNELFSMVSTSN---------RKMDKTTVLKATISFLR------SQNDVIKQCQ 45
Query: 121 V----SSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
+ KP+ ++N+ L+LEAL+G+L V+ G + + +E++ S + + +++ +
Sbjct: 46 AHEIKENWKPSFLSNDEFAQLMLEALDGYLLVITQSGTILYASESVTSLLNHLPSDLVNR 105
Query: 177 SVYNLIHHGDHARFHNCLVPSSHQVNAWTSD 207
SVY+ IH + + +N L SSH+V T D
Sbjct: 106 SVYDFIHIDERMKVYNVL--SSHKVVGGTGD 134
>gi|443702124|gb|ELU00285.1| hypothetical protein CAPTEDRAFT_165634, partial [Capitella teleta]
Length = 487
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 9/143 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RRE+EN+ +LA+++ + ++ + DK +I++ T + +K + D +
Sbjct: 10 RTRREKENSEFFDLAKMLPLPA------AITSQLDKASIIRLTTS---YLKMRTVFPDGL 60
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
G PT + LG +L+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 61 GDGWGQRIIPTAPREKELGSQILQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGN 120
Query: 177 SVYNLIHHGDHARFHNCLVPSSH 199
S+Y IH DH L H
Sbjct: 121 SIYEYIHPADHDEMTALLTVQQH 143
>gi|348529360|ref|XP_003452181.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Oreochromis niloticus]
Length = 887
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 17/143 (11%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQI---RNIKQQET 111
+EKRRR+Q N I+EL ++ + K DK ILQ++++ + + I Q
Sbjct: 32 SEKRRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLCKHKEIAAQSE 82
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
SS+ Q KP ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 83 SSEIRQ-----DWKPPFLSNEEFTQLMLEALDGFFIAIMTDGNILYVSESVTSLLEHLPA 137
Query: 172 EVLGKSVYNLIHHGDHARFHNCL 194
+++ +++ N + G+H+ + L
Sbjct: 138 DLVDQNLLNFLPVGEHSEVYKAL 160
>gi|270001312|gb|EEZ97759.1| hypothetical protein TcasGA2_TC016204 [Tribolium castaneum]
Length = 438
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 23/173 (13%)
Query: 30 AESMSSLAVKPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVK 89
+ES+S++A + A+ +++ N + RRE+EN ELA+L+ + ++ +
Sbjct: 187 SESLSAVA----RGAMKEKSKNAA---RSRREKENAEFIELAKLLPLPA------AITSQ 233
Query: 90 PDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITN-----EVLGPLLLEALEG 144
DK ++++ T + + K ++ D + G+ + P V + LG LL+ L+G
Sbjct: 234 LDKASVIRLTTSYL---KMRQVFPDGL--GDAWGATPVVPNPREAPIKELGSYLLQTLDG 288
Query: 145 FLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPS 197
F+FVV PDG + + +E + S+ E+ G S+Y IH DH L P+
Sbjct: 289 FIFVVAPDGKIMYISETASVHLGLSQVELTGNSIYEYIHPADHDEMTAVLSPT 341
>gi|251747935|gb|ABI95425.2| clock-3a protein [Haplochromis burtoni]
Length = 885
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 17/143 (11%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQI---RNIKQQET 111
+EKRRR+Q N I+EL ++ + K DK ILQ++++ + + I Q
Sbjct: 32 SEKRRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLCKHKEIAAQSE 82
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
SS+ Q KP ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 83 SSEIRQ-----DWKPPFLSNEEFTQLMLEALDGFFIAIMTDGNILYVSESVTSLLEHLPA 137
Query: 172 EVLGKSVYNLIHHGDHARFHNCL 194
+++ +++ N + G+H+ + L
Sbjct: 138 DLVDQNLLNFLPVGEHSEVYKAL 160
>gi|55275965|gb|AAV49748.1| aryl hydrocarbon receptor 1 beta [Xenopus laevis]
Length = 834
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KR R++ N +E LA L+ F E + S K DK ++L+ +V+ +R E A+
Sbjct: 34 KRHRDRLNTELERLASLLP---FQEEIIS---KLDKLSVLRLSVSYLRAKGFFEA---AL 84
Query: 117 QQGEVSSSKPTVITNEVL---GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
QQ + + T E+ G LLL+AL GF+ VV DG V F + I+ ++ + + +V
Sbjct: 85 QQSKTDGNGRTQKQAELRSLEGELLLQALNGFVLVVASDGLVFFASSTIQDYLGFQQSDV 144
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
+ +SVY LIH D F L
Sbjct: 145 IHQSVYELIHTEDRLEFQRQL 165
>gi|148225118|ref|NP_001082693.1| aryl hydrocarbon receptor [Xenopus laevis]
gi|32469276|dbj|BAC79074.1| aryl hydrocarbon receptor [Xenopus laevis]
Length = 834
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KR R++ N +E LA L+ F E + S K DK ++L+ +V+ +R E A+
Sbjct: 34 KRHRDRLNTELERLASLLP---FQEEIIS---KLDKLSVLRLSVSYLRAKGFFEA---AL 84
Query: 117 QQGEVSSSKPTVITNEVL---GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
QQ + + T E+ G LLL+AL GF+ VV DG V F + I+ ++ + + +V
Sbjct: 85 QQSKTDGNGRTQKQAELRSLEGELLLQALNGFVLVVASDGLVFFASSTIQDYLGFQQSDV 144
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
+ +SVY LIH D F L
Sbjct: 145 IHQSVYELIHTEDRLEFQRQL 165
>gi|213626945|gb|AAI70445.1| Aryl hydrocarbon receptor [Xenopus laevis]
gi|213626947|gb|AAI70447.1| Aryl hydrocarbon receptor [Xenopus laevis]
Length = 834
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KR R++ N +E LA L+ F E + S K DK ++L+ +V+ +R E A+
Sbjct: 34 KRHRDRLNTELERLASLLP---FQEEIIS---KLDKLSVLRLSVSYLRAKGFFEA---AL 84
Query: 117 QQGEVSSSKPTVITNEVL---GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
QQ + + T E+ G LLL+AL GF+ VV DG V F + I+ ++ + + +V
Sbjct: 85 QQSKTDGNGRTQKQAELRSLEGELLLQALNGFVLVVASDGLVFFASSTIQDYLGFQQSDV 144
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
+ +SVY LIH D F L
Sbjct: 145 IHQSVYELIHTEDRLEFQRQL 165
>gi|195128599|ref|XP_002008750.1| GI13667 [Drosophila mojavensis]
gi|193920359|gb|EDW19226.1| GI13667 [Drosophila mojavensis]
Length = 408
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I FA + K DK +L+ V +R I+ +
Sbjct: 37 EKRRRDKMNTYINELSSMIPMC-FA-----MQRKLDKLTVLRMAVQHLRGIR------GS 84
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ +P+ ++++ L ++L+A EGFLFVV D G + + +E++ + + ++ ++L
Sbjct: 85 LHPYNGGDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSESVSTVLNCTQADLL 144
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 145 GQSWFDVLHPKD 156
>gi|327261480|ref|XP_003215558.1| PREDICTED: single-minded homolog 1-like [Anolis carolinensis]
Length = 769
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHPSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y +H DH
Sbjct: 122 NSIYEYVHPADH 133
>gi|60729645|pir||JC7993 aryl hydrocarbon receptor - African clawed frog
Length = 834
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KR R++ N +E LA L+ F E + S K DK ++L+ +V+ +R E A+
Sbjct: 34 KRHRDRLNTELERLASLLP---FQEEIIS---KLDKLSVLRLSVSYLRAKGFFEA---AL 84
Query: 117 QQGEVSSSKPTVITNEVL---GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
QQ + + T E+ G LLL+AL GF+ VV DG V F + I+ ++ + + +V
Sbjct: 85 QQSKTDGNGRTQKQAELRSLEGELLLQALNGFVLVVASDGLVFFASSTIQDYLGFQQSDV 144
Query: 174 LGKSVYNLIHHGDHARFHNCL 194
+ +SVY LIH D F L
Sbjct: 145 IHQSVYELIHTEDRLEFQRQL 165
>gi|241615276|ref|XP_002406740.1| circadian locomoter output cycles kaput protein, putative [Ixodes
scapularis]
gi|215500859|gb|EEC10353.1| circadian locomoter output cycles kaput protein, putative [Ixodes
scapularis]
Length = 173
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N I EL ++S + A K DK +L+ T+ +R+ + S
Sbjct: 42 LSEKKRRDQFNMLINELCSMVSTS---------ARKMDKSTVLRSTIAFLRSHNDVSSQS 92
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
A Q+G+ + KP+ ++NE L+LE+LEGFL V++ +G + + +E++ S +
Sbjct: 93 QA-QEGQ-ENWKPSFLSNEEFTHLMLESLEGFLLVLSLNGQILYTSESVASLL 143
>gi|395534668|ref|XP_003769362.1| PREDICTED: single-minded homolog 1 [Sarcophilus harrisii]
Length = 765
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G + + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSTRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|126310365|ref|XP_001367899.1| PREDICTED: single-minded homolog 1 [Monodelphis domestica]
Length = 765
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G + + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSTRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPADH 133
>gi|301607501|ref|XP_002933348.1| PREDICTED: aryl hydrocarbon receptor [Xenopus (Silurana)
tropicalis]
Length = 846
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 15/165 (9%)
Query: 36 LAVKPDKCAILQETVNQCLNE---KRRREQENNYIEELAELISAASFAESMSSLAVKPDK 92
+ V KC I++ T + + KR R++ N ++ LA L+ F + + S K DK
Sbjct: 13 IYVGSHKCLIIKPTQVEGVKSNPSKRHRDRLNTELDRLASLLP---FPDDIIS---KLDK 66
Query: 93 CAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVL---GPLLLEALEGFLFVV 149
++L+ +V+ +R E A+Q+G+ + T ++ G LLL+AL GF+ VV
Sbjct: 67 LSVLRLSVSYLRAKGFFEV---ALQKGKADGNSRTQKQTDLRTLEGELLLQALNGFVLVV 123
Query: 150 NPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCL 194
DG V F + I+ ++ + + +V+ +SVY LIH D F L
Sbjct: 124 ASDGLVFFSSSTIQDYLGFQQSDVIHQSVYELIHTEDRVEFQRQL 168
>gi|345306659|ref|XP_001512993.2| PREDICTED: neuronal PAS domain-containing protein 2-like
[Ornithorhynchus anatinus]
Length = 1369
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL ++ +K DK ILQ T++ ++ K+ S+
Sbjct: 564 SEKKRRDQFNVLIKELCTMLQGHGHP-------LKMDKSTILQRTIDFLQKQKEITAQSE 616
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
A + + KP+ ++NE L+LEAL+GFL + DG + + ++++ S + + +++
Sbjct: 617 ACEIRQ--DWKPSFLSNEEFTQLMLEALDGFLIALTTDGIIIYVSDSVSSLLGHLPSDLV 674
Query: 175 GKSVYNLIHHGDHARFHNCLVP 196
+++ N + + + + L P
Sbjct: 675 DQNILNFLPEREQSEVYKLLSP 696
>gi|260835180|ref|XP_002612587.1| hypothetical protein BRAFLDRAFT_265033 [Branchiostoma floridae]
gi|229297965|gb|EEN68596.1| hypothetical protein BRAFLDRAFT_265033 [Branchiostoma floridae]
Length = 333
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN LA+L+ S ++ + DK +I++ T + ++ E D
Sbjct: 10 RTRREKENYEFSLLAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDV 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
Q SSS I E LG LL+ L+GFLFVV PDG + + +E + S+ E+ G
Sbjct: 64 WGQRSSSSSAMDAIGKE-LGSHLLQTLDGFLFVVAPDGKIMYISETASVHLGLSQVELTG 122
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 123 NSIYEYIHPADH 134
>gi|363732683|ref|XP_420353.3| PREDICTED: neuronal PAS domain-containing protein 2-like [Gallus
gallus]
Length = 861
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL ++ M DK ILQ T++ ++ K+ ++
Sbjct: 265 SEKKRRDQFNVLIKELCTMLQGHGHPLKM-------DKSTILQRTIDFLQKQKEITAQTE 317
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
A + + KP+ ++NE L+LEAL+GFL + DG + + ++++ S + + +++
Sbjct: 318 ACEIRQ--DWKPSFLSNEEFTQLMLEALDGFLIALTTDGIIIYVSDSVSSLLGHLPSDLV 375
Query: 175 GKSVYNLIHHGDHARFHNCLVP 196
+++ N + + + + L P
Sbjct: 376 DQNILNFLPEREQSEVYKLLSP 397
>gi|157278096|ref|NP_001098148.1| aryl hydrocarbon receptor [Oryzias latipes]
gi|14669838|dbj|BAB62010.1| AHR1 alpha [Oryzias latipes]
gi|14669842|dbj|BAB62012.1| AHR1 alpha [Oryzias latipes]
Length = 879
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 76/141 (53%), Gaps = 14/141 (9%)
Query: 57 KRRREQENNYIEELAELISAASFAES-MSSLAVKPDKCAILQETVNQIR-----NIKQQE 110
KR R++ N+ ++ LA L+ F E +SSL DK +IL+ +V+ +R ++ ++
Sbjct: 29 KRHRDRLNSELDRLASLLP---FPEDVISSL----DKLSILRLSVSYLRTKSFFSVALKD 81
Query: 111 TSSDAVQQGEVSSSKPTVITNEVL-GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+ V Q + ++ G LLL+AL GF+ VV +G + FC+ I+ ++ +
Sbjct: 82 QPPNGVTQQDGGFKAAAAADGQIPEGELLLQALNGFVLVVTAEGIIFFCSHTIQDYLGFH 141
Query: 170 RQEVLGKSVYNLIHHGDHARF 190
+ +V+ +SV+ LIH D F
Sbjct: 142 QTDVMHQSVFELIHTEDQQEF 162
>gi|14669840|dbj|BAB62011.1| AHR1 beta [Oryzias latipes]
Length = 783
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 57 KRRREQENNYIEELAELISAASFAES-MSSLAVKPDKCAILQETVNQIR-----NIKQQE 110
KR R++ N+ ++ LA L+ F E +SSL DK +IL+ +V+ +R ++ ++
Sbjct: 29 KRHRDRLNSELDRLASLLP---FPEDVISSL----DKLSILRLSVSYLRTKSFFSVALKD 81
Query: 111 TSSDAVQQGEVSSSKPTVITNEVL-GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+ V Q + ++ G LLL+AL GF+ VV +G + FC+ I+ ++ +
Sbjct: 82 QPPNGVTQQDGGFKAAAAADGQIPEGELLLQALNGFVLVVTAEGIIFFCSHTIQDYLGFH 141
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCL 194
+ +V+ +SV+ LIH D F L
Sbjct: 142 QTDVMHQSVFELIHTEDQQEFRRNL 166
>gi|195379458|ref|XP_002048496.1| GJ14003 [Drosophila virilis]
gi|194155654|gb|EDW70838.1| GJ14003 [Drosophila virilis]
Length = 407
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 73/132 (55%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I ++ K DK +L+ V +R I+
Sbjct: 36 EKRRRDKMNTYINELSSMIPMCY------AMQRKLDKLTVLRMAVQHLRGIR------GG 83
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ +S +P+ ++ + L ++L+A EGFLFVV D G + + +E++ S + + ++L
Sbjct: 84 LHPYNGASYRPSFLSEQELKMIILQASEGFLFVVGCDRGRILYVSESVTSVLNCTPGDLL 143
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 144 GQSWFDVLHPKD 155
>gi|18859359|ref|NP_571911.1| single-minded homolog 2 [Danio rerio]
gi|18056651|gb|AAL58099.1|AF363019_1 single-minded protein [Danio rerio]
gi|40850960|gb|AAH65360.1| Single-minded homolog 2 (Drosophila) [Danio rerio]
Length = 585
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
K RRE+EN ELA+L+ S ++ + DK +I++ T + + K + D +
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYL---KMRAVFPDGL 60
Query: 117 QQ--GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
+ G+ + P I + LG LL+ L+GF+FVV DG + + +E + S+ E+
Sbjct: 61 GEAWGQSARVSPLDIMAKDLGSHLLQTLDGFVFVVASDGKILYISETASVHLGLSQVELT 120
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQ 200
G S++ IH DH L S+HQ
Sbjct: 121 GNSIFEYIHPSDHDEMSAVL--STHQ 144
>gi|449267860|gb|EMC78751.1| Neuronal PAS domain-containing protein 2, partial [Columba livia]
Length = 674
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 39/294 (13%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL ++ M DK ILQ T++ ++ K+ ++
Sbjct: 18 SEKKRRDQFNVLIKELCTMLQGHGHPLKM-------DKSTILQRTIDFLQKQKEITAQTE 70
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
A + + KP+ ++NE L+LEAL+GFL + DG + + ++++ S + + +++
Sbjct: 71 ACEIRQ--DWKPSFLSNEEFTQLMLEALDGFLIALTTDGIIIYVSDSVSSLLGHLPSDLV 128
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGK--------RPSLTASTPNRT 226
+++ N + + + + L P + +D + R +L + P
Sbjct: 129 DQNILNFLPEREQSEVYKLLSPHVLMTDPVAADFLNAEKQIEFCCHLARGNLDPNEPLMY 188
Query: 227 FNIRLLISSTHLTAGLSRA--GGENGQDDSGDVSSEGGPCLMCVARRIPPTD-KQL---S 280
++ ++ + T + + G E+ + ++E CL+ R + P K+L
Sbjct: 189 EYVKFVVDFKYFTHVPTPSCNGFESAIARAFRSATEEQVCLVATVRLVTPQFLKELCNVE 248
Query: 281 APIEQFTMK---------LD-RSGTIIG------MDTSGVSQTHTQYLNKAVAC 318
P E+FT + LD R+ IIG + TSG H L C
Sbjct: 249 EPCEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARC 302
>gi|432845822|ref|XP_004065870.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Oryzias latipes]
Length = 932
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 95/197 (48%), Gaps = 35/197 (17%)
Query: 14 NNYIEELAELISAASFAESMSSLAVKPDKCAIL-------------QETVNQCLNEKRRR 60
N Y+ ++I+A + S + D C+I +E+ N+ +EK+RR
Sbjct: 13 NAYLTPKEQIIAAKTLISSNHDIK---DDCSIFDGFIEEDEKDKAKRESRNK--SEKKRR 67
Query: 61 EQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQI---RNIKQQETSSDAVQ 117
+Q N I+EL ++ + K DK ILQ++++ + + I Q SS+ Q
Sbjct: 68 DQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLCKHKEIAAQSESSEIRQ 118
Query: 118 QGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKS 177
KP ++NE L+LEAL+GF + DG + + +E++ S + + +++ ++
Sbjct: 119 DW-----KPPFLSNEEFTQLMLEALDGFFIAIMTDGNILYVSESVTSLLEHLPADLVDQN 173
Query: 178 VYNLIHHGDHARFHNCL 194
+ N + G+H+ + L
Sbjct: 174 LLNFLPVGEHSEVYKAL 190
>gi|426392995|ref|XP_004062819.1| PREDICTED: single-minded homolog 2 [Gorilla gorilla gorilla]
Length = 831
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|403180740|gb|AFR24092.1| aryl hydrocarbon receptor 1 [Squalus acanthias]
Length = 922
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 24/180 (13%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRN-------IKQQ 109
KR R++ N+ ++ LA L+ FAE ++S DK +IL+ +V +R+ K
Sbjct: 29 KRHRDRLNSELDRLAGLLP---FAEDVTSSL---DKLSILRLSVTYLRSKTFFRVAFKNH 82
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVL--GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIR 167
+ A G + K + + + VL G LLL+AL GF+ V+ DG + + + I+ ++
Sbjct: 83 SCNKIADGNGNHGNRKVSGLADGVLPEGELLLQALNGFVLVITADGLIFYVSHTIQDYLG 142
Query: 168 YSRQEVLGKSVYNLIHHGDHARF----HNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTP 223
+ + +V+ +SV+ LIH D F H L P + T Q G++ + TA P
Sbjct: 143 FHQTDVMHQSVFELIHTEDQQEFRRNLHWALNPPT-----ATEAEKAQPGEKVTSTAVIP 197
>gi|395752789|ref|XP_002830715.2| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 2 [Pongo
abelii]
Length = 679
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|224096024|ref|XP_002194313.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like
protein 2 [Taeniopygia guttata]
Length = 625
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 23/190 (12%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V ++++K +S
Sbjct: 102 EKRRRDKMNNLIEELSAMIPQC------NPMARKLDKLTVLRMAVQHLKSLKGSSSSYSE 155
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V+ KP+ + ++ L L+L A +GFLFVV + G + F +E++ + Y + ++
Sbjct: 156 VRY------KPSFLKDDELRQLILRAADGFLFVVGCNRGKILFVSESVCKILNYDQASLI 209
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKR--------PSLTASTPNRT 226
G+S+++ +H D A+ L SS V+ G+ G + P+ S R+
Sbjct: 210 GQSLFDYLHPKDVAKVKEQL--SSSDVSPREKLVDGKTGLQVHTDFQAGPARLNSGARRS 267
Query: 227 FNIRLLISST 236
F R+ S T
Sbjct: 268 FFCRIKCSRT 277
>gi|119892837|ref|XP_615908.3| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Bos taurus]
gi|297475095|ref|XP_002687774.1| PREDICTED: aryl hydrocarbon receptor nuclear translocator-like 2
[Bos taurus]
gi|296487336|tpg|DAA29449.1| TPA: aryl hydrocarbon receptor nuclear translocator-like 2-like
[Bos taurus]
Length = 704
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN I +L+ +I S +A K DK +L+ V +R++K +
Sbjct: 185 EKRRRDKMNNLIGKLSTMIPQCS------PMARKLDKLTVLRLAVQHLRSLKGMTSCYPG 238
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + ++
Sbjct: 239 ------NNYRPSFIHDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSRILNYDQASLI 292
Query: 175 GKSVYNLIHHGD 186
G+S+++ +H D
Sbjct: 293 GQSLFDFLHPKD 304
>gi|348556425|ref|XP_003464022.1| PREDICTED: single-minded homolog 2-like [Cavia porcellus]
Length = 662
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|1213283|gb|AAA91202.1| SIM2 [Mus musculus]
Length = 742
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|440900375|gb|ELR51526.1| hypothetical protein M91_13238 [Bos grunniens mutus]
Length = 634
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN I +L+ +I S +A K DK +L+ V +R++K +
Sbjct: 115 EKRRRDKMNNLIGKLSTMIPQCS------PMARKLDKLTVLRLAVQHLRSLKGMTSCYPG 168
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + ++
Sbjct: 169 ------NNYRPSFIHDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSRILNYDQASLI 222
Query: 175 GKSVYNLIHHGD 186
G+S+++ +H D
Sbjct: 223 GQSLFDFLHPKD 234
>gi|270014664|gb|EFA11112.1| hypothetical protein TcasGA2_TC004710 [Tribolium castaneum]
Length = 679
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 29/137 (21%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ + S+LA KPDK IL+ V ++ ++
Sbjct: 115 NHCEIERRRRNKMTAYITELSDMVP------TCSALARKPDKLTILRMAVAHMKALRGTG 168
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
TS+D + KP+ +T++ L L+LEA +GFLFVV+ D
Sbjct: 169 NTSADG-------TYKPSFLTDQELKHLILEAADGFLFVVSCD---------------TG 206
Query: 170 RQEVLGKSVYNLIHHGD 186
R + G +Y+ IH D
Sbjct: 207 RSDWYGSCLYDNIHPED 223
>gi|348541611|ref|XP_003458280.1| PREDICTED: single-minded homolog 1-like [Oreochromis niloticus]
Length = 761
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 11/142 (7%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RRE+EN+ ELA+++ S ++ + DK +I++ T + + K + +
Sbjct: 10 RTRREKENSEFYELAKMLPLPS------AITSQLDKASIIRLTTSYL---KMRIVFPQGL 60
Query: 117 QQGEVSSSKPTVITN--EVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
+ SS+ + N LG LL+ L+GF+FVV PDG + + +E + S+ E+
Sbjct: 61 GEAWGHSSRTRSLDNIGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT 120
Query: 175 GKSVYNLIHHGDHARFHNCLVP 196
G S+Y +H DH L P
Sbjct: 121 GNSIYEYVHPADHDEMTAVLTP 142
>gi|449682715|ref|XP_002155628.2| PREDICTED: aryl hydrocarbon receptor nuclear translocator 2-like
[Hydra magnipapillata]
Length = 513
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 16 YIEELAELISAASFAESMSSLAVKPDKCAILQETV-------NQCLNEKRRREQENNYIE 68
++ A +IS+ +F + +V K +E N E+RRR + N YI
Sbjct: 39 FLRRQASVISSKNFVFQQDNASVYTAKIVTEKEQSKERFARENHSEIERRRRNKMNAYIN 98
Query: 69 ELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTV 128
EL++++ S + L KPDK +L+ VN ++++ + + KPT
Sbjct: 99 ELSDMVP------SCNGLVRKPDKLTVLKMAVNYMKSLHGSSNKDEDL--------KPTF 144
Query: 129 ITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDH 187
+++E L L+LEA +GFLFVV G + + ++ I + + + +++++L+H D
Sbjct: 145 LSDEELKHLVLEATDGFLFVVLCKTGRLIYISDAITPVLNQLQNHWINRNLFDLVHPEDK 204
Query: 188 ARFHNCL---VPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
+ + L + ++ + S G + S R+F IR+
Sbjct: 205 DKLRDQLDVSISKDTRIIDLKTASIKAVGNNENCLKSGSRRSFLIRM 251
>gi|68299588|dbj|BAE02824.1| aryl hydrocarbon receptor 1 [Pagrus major]
Length = 846
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 17/148 (11%)
Query: 57 KRRREQENNYIEELAELISAASFAES-MSSLAVKPDKCAILQETVNQIRN-------IKQ 108
KR R++ N+ ++ LA L+ F E +SSL DK +IL+ +V+ +R +K
Sbjct: 29 KRHRDRLNSELDRLASLLP---FPEDVISSL----DKLSILRLSVSFLRTKSFFSVALKN 81
Query: 109 QETS--SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
Q ++ + + G+ S + +V G LLL+AL GF+ VV +G + FC+ I+ ++
Sbjct: 82 QLSNGVNKSSDHGDDSRTSGSVDGRIPEGELLLQALNGFVLVVTAEGIIFFCSHTIQDYL 141
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCL 194
+ + +V+ +SV+ LIH D F L
Sbjct: 142 GFHQTDVMHQSVFELIHTEDQQEFRRNL 169
>gi|194663812|ref|XP_001789154.1| PREDICTED: single-minded homolog 2 [Bos taurus]
Length = 660
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|189241710|ref|XP_967930.2| PREDICTED: similar to Single minded [Tribolium castaneum]
Length = 521
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 16/146 (10%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RRE+EN ELA+L+ + ++ + DK ++++ T + + K ++ D +
Sbjct: 10 RSRREKENAEFIELAKLLPLPA------AITSQLDKASVIRLTTSYL---KMRQVFPDGL 60
Query: 117 QQGEVSSSKPTVITN-----EVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
G+ + P V + LG LL+ L+GF+FVV PDG + + +E + S+
Sbjct: 61 --GDAWGATPVVPNPREAPIKELGSYLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQV 118
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPS 197
E+ G S+Y IH DH L P+
Sbjct: 119 ELTGNSIYEYIHPADHDEMTAVLSPT 144
>gi|2952266|gb|AAC05481.1| single-minded protein 1 [Mus musculus]
Length = 765
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHTSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGD 186
S+Y IH D
Sbjct: 122 NSIYEYIHPAD 132
>gi|332229288|ref|XP_003263823.1| PREDICTED: single-minded homolog 2 [Nomascus leucogenys]
Length = 538
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPMDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|262189351|gb|ACY30370.1| aryl hydrocarbon receptor 1 beta-like protein [Salmo salar]
Length = 1166
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 93/174 (53%), Gaps = 18/174 (10%)
Query: 17 IEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENNYIEELAELISA 76
+E +++ +S +F ++ L+VKP + ++ + KR R++ N +E LA L+
Sbjct: 1 MESVSDRLSTCTF---VACLSVKPPQSEGVKSNPS-----KRHRDRLNGELERLASLLP- 51
Query: 77 ASFAESMSSLAVKPDKCAILQETVNQIR--NIKQQETSSDAVQQGEVSSSKPTVITNEVL 134
F E +++ DK +IL+ +V+ +R N + + G +SK T + + L
Sbjct: 52 --FPEEVTTSL---DKLSILRLSVSYLRAKNFFTVALKNCSCNGGSADNSKATGLEDSWL 106
Query: 135 --GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGD 186
G LLL+AL GF+ V+ DG + + + I+ ++ + + +++ +SVY L+H D
Sbjct: 107 PEGELLLQALNGFVLVITNDGTIFYSSHTIQDYLGFHQTDIMHQSVYELVHTED 160
>gi|109065407|ref|XP_001085660.1| PREDICTED: single-minded homolog 2 [Macaca mulatta]
Length = 634
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|61353791|gb|AAX44045.1| clock [Macrobrachium rosenbergii]
Length = 704
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 16/141 (11%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N I EL+ ++++ + K DK +L+ T+ ++N Q+ S
Sbjct: 18 LSEKKRRDQFNLLINELSSMVASNN---------RKMDKSTVLKATIAFLKN---QKEIS 65
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
Q E+ KP+ ++NE L+LEAL+GF+ V+ G V + +E+I I + +
Sbjct: 66 VRTQSNEIREDWKPSFLSNEEFTHLMLEALDGFIMTVSCSGRVLYTSESITPLIGHLPSD 125
Query: 173 VLGKSVYNLI---HHGDHARF 190
+ G +Y+L+ G+ RF
Sbjct: 126 LAGTPLYDLMLEEERGEMRRF 146
>gi|1213281|gb|AAA91201.1| SIM1 [Mus musculus]
Length = 695
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 9/131 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHTSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGD 186
S+Y IH D
Sbjct: 122 NSIYEYIHPAD 132
>gi|402862419|ref|XP_003895560.1| PREDICTED: single-minded homolog 2 [Papio anubis]
Length = 667
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|431901494|gb|ELK08516.1| Single-minded like protein 2 [Pteropus alecto]
Length = 633
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|114684078|ref|XP_001169453.1| PREDICTED: single-minded homolog 2 isoform 2 [Pan troglodytes]
Length = 667
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|157819625|ref|NP_001100578.1| single-minded homolog 2 [Rattus norvegicus]
gi|149017724|gb|EDL76725.1| single-minded 2 (predicted) [Rattus norvegicus]
Length = 656
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|338725837|ref|XP_001916400.2| PREDICTED: LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear
translocator-like 2 [Equus caballus]
Length = 680
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 15/136 (11%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V ++ +K
Sbjct: 160 EKRRRDKMNNLIEELSAMIPQCNL------VARKLDKLTVLRMAVQHVKALK-------G 206
Query: 116 VQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
V V + +P+ I + L L+L+ EGFL VV + G + F ++++ + Y + +
Sbjct: 207 VTNSYVGDTYRPSFIQDNELRHLILKNAEGFLLVVGCERGKILFVSKSVSKILNYDQASL 266
Query: 174 LGKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 267 TGQSLFDFLHPKDVAK 282
>gi|344294716|ref|XP_003419062.1| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 2-like
[Loxodonta africana]
Length = 677
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDSMAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|403271535|ref|XP_003927678.1| PREDICTED: single-minded homolog 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403271537|ref|XP_003927679.1| PREDICTED: single-minded homolog 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 563
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|426219555|ref|XP_004003986.1| PREDICTED: single-minded homolog 2 [Ovis aries]
Length = 524
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|27462630|gb|AAO15522.1|AF448805_1 Clock [Sebastes schlegelii]
Length = 326
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 19/150 (12%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQI---RNIKQQETS 112
EK+RR+Q N I+EL ++ + K DK ILQ++++ + + I Q S
Sbjct: 18 EKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLCKHKEIAAQSES 68
Query: 113 SDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
S+ Q KP ++NE L+LEAL+GF + DG + + +E++ S + + +
Sbjct: 69 SEIRQDW-----KPPFLSNEEFTQLMLEALDGFFIAIMTDGNILYVSESVTSLLEHLPTD 123
Query: 173 VLGKSVYNLIHHGDHARFHNCLV--PSSHQ 200
++ +++ N + G+H+ + L P+ H+
Sbjct: 124 LVDQNLLNFLPIGEHSDVYKALSTHPTDHE 153
>gi|4827004|ref|NP_005060.1| single-minded homolog 2 long isoform [Homo sapiens]
gi|2851630|sp|Q14190.2|SIM2_HUMAN RecName: Full=Single-minded homolog 2; AltName: Full=Class E basic
helix-loop-helix protein 15; Short=bHLHe15
gi|2062417|gb|AAB62396.1| transcription factor SIM2 long form [Homo sapiens]
gi|6712195|dbj|BAA89433.1| single-minded 2 protein [Homo sapiens]
gi|119630143|gb|EAX09738.1| single-minded homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 667
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|217426003|gb|ACK44332.1| Cycle [Drosophila silvestris]
Length = 239
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 73/132 (55%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I ++ K DK +L+ V +R I+ +
Sbjct: 37 EKRRRDKMNTYINELSSMIPMCY------AMQRKLDKLTVLRMAVQHLRGIR------GS 84
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ +P+ ++++ L ++L+A EGFLFVV D G + F + ++ + + ++ ++L
Sbjct: 85 LHPYNGGDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILFVSNSVSNVLNCTQADLL 144
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 145 GQSWFDVLHPKD 156
>gi|1389638|dbj|BAA09700.1| mSim [Mus musculus]
gi|1586925|prf||2205234A Ah receptor nuclear translocator
Length = 657
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|354491783|ref|XP_003508034.1| PREDICTED: single-minded homolog 2 [Cricetulus griseus]
gi|344256479|gb|EGW12583.1| Single-minded-like 2 [Cricetulus griseus]
Length = 538
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|148671804|gb|EDL03751.1| single-minded homolog 2 (Drosophila) [Mus musculus]
Length = 657
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|2599383|gb|AAB84099.1| single-minded 2 protein [Mus musculus]
Length = 657
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|351702236|gb|EHB05155.1| Neuronal PAS domain-containing protein 2 [Heterocephalus glaber]
Length = 783
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 21/151 (13%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNT---------RKMDKTTVLEKVIGFLQ--KHNEVSAQ 65
Query: 115 A----VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSR 170
+QQ KP+ ++NE L+LEAL+GF+ VV DG + + +++I + +
Sbjct: 66 TEICDIQQDW----KPSFLSNEEFTQLMLEALDGFIIVVTTDGSILYVSDSITPLLGHLP 121
Query: 171 QEVLGKSVYNLIHHGDHARFHNCLVPSSHQV 201
+V+ +++ N + +H+ + L SSH +
Sbjct: 122 SDVMDQNLLNFLPEQEHSEVYKML--SSHML 150
>gi|334350262|ref|XP_003342332.1| PREDICTED: circadian locomoter output cycles protein kaput-like
[Monodelphis domestica]
Length = 814
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 80/153 (52%), Gaps = 9/153 (5%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I EL ++ +K DK ILQ+T++ + KQ+E +
Sbjct: 93 SEKKRRDQFNVLIRELCSMLQG-------QGEPIKMDKATILQKTIDFLH--KQKEKENQ 143
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
A G + KP+ ++NE L+ EAL+ FL + +G + + ++N+ S + + +++
Sbjct: 144 AQAAGARGAWKPSFLSNEEFTQLMFEALDEFLITLTTEGIIIYVSDNVTSLLGHLPSDLV 203
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD 207
+++ +L+ +H + L P + + T+D
Sbjct: 204 YQNILSLLPEQEHKDVYKVLSPQTILPSPVTAD 236
>gi|119226237|ref|NP_035507.2| single-minded homolog 2 [Mus musculus]
gi|2498016|sp|Q61079.1|SIM2_MOUSE RecName: Full=Single-minded homolog 2; AltName: Full=SIM
transcription factor; Short=mSIM
gi|1377818|gb|AAB19098.1| sim transcription factor [Mus musculus]
gi|1754613|dbj|BAA11013.1| Sim2 [Mus musculus]
Length = 657
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|391325150|ref|XP_003737102.1| PREDICTED: single-minded homolog 1-like [Metaseiulus occidentalis]
Length = 496
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RRE+EN ELA+L+ ++ + DK ++++ T + + K + D +
Sbjct: 10 RSRREKENAEFVELAKLLPLPQ------AITTQLDKASVIRLTTSYL---KMRAVFPDGL 60
Query: 117 QQ---GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
EV + LG LL+ L+GF+FVV PDG + + +E + S+ E+
Sbjct: 61 GDKWGAEVDRERSDSAGIRELGSHLLQTLDGFVFVVAPDGKIMYISETASVHLGLSQVEL 120
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLI 233
G S+Y +H DH + L SS GGQ R S +R+F +R+
Sbjct: 121 TGNSIYEYVHQNDHDEMASVLSCSS-------PPEGGQP--RGSQGELEIDRSFFLRMKC 171
Query: 234 SSTHLTAGLSRAG 246
AGL+ G
Sbjct: 172 VLAKRNAGLTSGG 184
>gi|195020286|ref|XP_001985163.1| GH16911 [Drosophila grimshawi]
gi|193898645|gb|EDV97511.1| GH16911 [Drosophila grimshawi]
Length = 409
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 73/132 (55%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I ++ K DK +L+ V +R I+ +
Sbjct: 37 EKRRRDKMNTYINELSSMIPMCY------AMQRKLDKLTVLRMAVQHLRGIR------GS 84
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ +P+ ++++ L ++L+A EGFLFVV D G + F + ++ + + ++ ++L
Sbjct: 85 LHPYNGGDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILFVSNSVSNVLNCTQADLL 144
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 145 GQSWFDVLHPKD 156
>gi|118343667|ref|NP_001071655.1| transcription factor protein [Ciona intestinalis]
gi|70568897|dbj|BAE06313.1| transcription factor protein [Ciona intestinalis]
Length = 549
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ ++ ++ A
Sbjct: 27 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKQLR------GA 74
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ G ++ KP+ +T++ L L+LEA +GFLFV D V + ++ + + + + +
Sbjct: 75 MGGGVENNYKPSFLTDQELKHLVLEAADGFLFVTACDSSQVVYVSDTVTAVLNQAHSDWN 134
Query: 175 GKSVYNLIHHGD 186
+Y+L+H D
Sbjct: 135 NHLLYDLVHPDD 146
>gi|284924950|dbj|BAI67740.1| clock [Bactrocera cucurbitae]
Length = 312
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
K+RR+Q N + +L+ LIS ++ K DK +L+ T I +K ++D
Sbjct: 1 KKRRDQFNTLVNDLSALISTSN---------RKMDKSTVLKST---IAFLKHHNEATDRS 48
Query: 117 QQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
+ E+ KPT +TN+ L+LE+L+GF+ V + G + + +E+I + Y +++
Sbjct: 49 KVFEIQQDWKPTFLTNDEFTHLMLESLDGFIIVFSGIGSICYASESITPLLGYLPSDLVN 108
Query: 176 KSVYNLIHHGDHARFHNCLV 195
++++L + DH N +
Sbjct: 109 MTIFDLTYEMDHESLLNIFL 128
>gi|2062419|gb|AAB62397.1| transcription factor SIM2 short form [Homo sapiens]
Length = 570
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|284924952|dbj|BAI67741.1| clock [Bactrocera cucurbitae]
Length = 312
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
K+RR+Q N + +L+ LIS ++ K DK +L+ T I +K ++D
Sbjct: 1 KKRRDQFNTLVNDLSALISTSN---------RKMDKSTVLKST---IAFLKHHNEATDRS 48
Query: 117 QQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
+ E+ KPT +TN+ L+LE+L+GF+ V + G + + +E+I + Y +++
Sbjct: 49 KVFEIQQDWKPTFLTNDEFTHLMLESLDGFIIVFSGIGSICYASESITPLLGYLPSDLVN 108
Query: 176 KSVYNLIHHGDHARFHNCLV 195
++++L + DH N +
Sbjct: 109 MTIFDLTYEMDHESLLNIFL 128
>gi|397507000|ref|XP_003824000.1| PREDICTED: single-minded homolog 2 [Pan paniscus]
Length = 570
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|440892235|gb|ELR45515.1| Single-minded-like protein 2, partial [Bos grunniens mutus]
Length = 538
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|283806548|ref|NP_001164531.1| clock [Acyrthosiphon pisum]
gi|283483350|emb|CAX37105.1| clock [Acyrthosiphon pisum]
Length = 613
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EK RR+Q NN I EL ++S + K DK +L+ T+N + KQ++ +
Sbjct: 36 EKNRRDQFNNLINELNRMLSTTN---------RKMDKSTVLKTTINYLN--KQKDILLKS 84
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
+ KP + NE ++LEAL+GF+ V G + +E + + + Y + +
Sbjct: 85 KVHEIDNDWKPAFLLNEEFTHIILEALDGFMIVFTSLGKILHASETVTALLGYLPKTMEN 144
Query: 176 KSVYNLIHHGDHARFHNCLVPS 197
S++ +IH DH+ + +V S
Sbjct: 145 LSIFKIIHEADHSLLQDQIVES 166
>gi|194239684|ref|NP_033664.2| single-minded homolog 2 short isoform [Homo sapiens]
gi|83405489|gb|AAI10445.1| Single-minded homolog 2 (Drosophila) [Homo sapiens]
gi|119630142|gb|EAX09737.1| single-minded homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 570
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|390478207|ref|XP_002807815.2| PREDICTED: LOW QUALITY PROTEIN: single-minded homolog 2 [Callithrix
jacchus]
Length = 651
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|358410766|ref|XP_601023.5| PREDICTED: uncharacterized protein LOC522736, partial [Bos taurus]
Length = 847
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 82/149 (55%), Gaps = 22/149 (14%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KR R++ N +EL +L S F E + + + DK ++L+ V ++ +K T++ +
Sbjct: 201 KRHRDRLN---QELGKLSSLLPFPEDVRA---RLDKLSVLRLIVGYLK-VKSYFTAT--L 251
Query: 117 QQGEVS-SSKPTV----------ITNEVL--GPLLLEALEGFLFVVNPDGYVNFCTENIK 163
+ G V S+ P++ + E+ G LLL+AL+GFL VV DGYV + + ++
Sbjct: 252 KDGSVDCSADPSMNPRREHPFAQVHGELFSEGDLLLQALDGFLVVVTEDGYVFYVSPTVQ 311
Query: 164 SFIRYSRQEVLGKSVYNLIHHGDHARFHN 192
++ + + +++ +SV+ LIH D A F +
Sbjct: 312 DYLGFHQSDIIYQSVFELIHKEDRATFQS 340
>gi|442618830|ref|NP_001262527.1| single-minded, isoform C [Drosophila melanogaster]
gi|440217377|gb|AGB95909.1| single-minded, isoform C [Drosophila melanogaster]
Length = 675
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 43 CAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 102
CA+ +++ N + RRE+EN ELA+L+ + ++ + DK ++++ T +
Sbjct: 10 CAMKEKSKNAA---RTRREKENTEFCELAKLLPLPA------AITSQLDKASVIRLTTSY 60
Query: 103 IRNIKQQETSSDAVQQGEVSSSKPTV---ITNEVLGPLLLEALEGFLFVVNPDGYVNFCT 159
+ K ++ D + GE S P + T + LG LL+ L+GF+FVV PDG + + +
Sbjct: 61 L---KMRQVFPDGL--GEAWGSSPAMQRGATIKELGSHLLQTLDGFIFVVAPDGKIMYIS 115
Query: 160 ENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
E + S+ E+ G S++ IH+ D + L H
Sbjct: 116 ETASVHLGLSQVELTGNSIFEYIHNYDQDEMNAILSLHPH 155
>gi|440900488|gb|ELR51615.1| Aryl hydrocarbon receptor [Bos grunniens mutus]
Length = 705
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 30/184 (16%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KR R++ N +EL +L S F E + + + DK ++L+ V ++ +K T++ +
Sbjct: 40 KRHRDRLN---QELGKLSSLLPFPEDVRA---RLDKLSVLRLIVGYLK-VKSYFTAT--L 90
Query: 117 QQGEVS-SSKPTV----------ITNEVL--GPLLLEALEGFLFVVNPDGYVNFCTENIK 163
+ G V S+ P++ + E+ G LLL+AL+GFL V DGYV + + ++
Sbjct: 91 KDGSVDCSADPSMNPRREHPFAQVHGELFSEGDLLLQALDGFLVAVTEDGYVFYVSPTVQ 150
Query: 164 SFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTP 223
++ + + +V+ +SV+ LIH D A F + + W D+ + + T S P
Sbjct: 151 DYLGFHQSDVIYQSVFELIHKEDRATFQSQFL--------WPPDTTPISRAQQQDTHSLP 202
Query: 224 NRTF 227
+ F
Sbjct: 203 RKKF 206
>gi|410970001|ref|XP_003991479.1| PREDICTED: single-minded homolog 2 [Felis catus]
Length = 548
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|354482390|ref|XP_003503381.1| PREDICTED: neuronal PAS domain-containing protein 2-like
[Cricetulus griseus]
Length = 849
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 84/163 (51%), Gaps = 21/163 (12%)
Query: 43 CAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 102
CA+ ++ +EK+RR+Q N I+EL+ ++ + K DK +L++ +
Sbjct: 35 CALCVSRASRNKSEKKRRDQFNVLIKELSSMLPGNT---------RKMDKTTVLEKVIGF 85
Query: 103 IRNIKQQETSSDA----VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFC 158
++ K E S+ VQQ KP+ ++NE L+LEAL+GF+ V DG + +
Sbjct: 86 LQ--KHNEVSAQTEICDVQQDW----KPSFLSNEEFTQLMLEALDGFIIAVTTDGSIIYV 139
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQV 201
+++I + + +V+ +++ N + +H+ + L SSH +
Sbjct: 140 SDSITPLLGHLPSDVMDQNLLNFLPEQEHSEVYKML--SSHML 180
>gi|47213557|emb|CAF91831.1| unnamed protein product [Tetraodon nigroviridis]
Length = 832
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 17/143 (11%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQI---RNIKQQET 111
+EK+RR+Q N I+EL ++ + K DK ILQ++++ + + I Q
Sbjct: 27 SEKKRRDQFNVLIKELGTMLPGNT---------RKMDKSTILQKSIDFLCKHKEIAAQSE 77
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
SS+ Q KP ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 78 SSEIRQ-----DWKPPFLSNEEFTQLMLEALDGFFIAIMTDGNILYVSESVTSLLEHLPT 132
Query: 172 EVLGKSVYNLIHHGDHARFHNCL 194
+++ +++ N + G+H+ + L
Sbjct: 133 DLVDQNLLNFLPIGEHSDVYKAL 155
>gi|359062827|ref|XP_002685208.2| PREDICTED: aryl hydrocarbon receptor [Bos taurus]
Length = 693
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 82/149 (55%), Gaps = 22/149 (14%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KR R++ N +EL +L S F E + + + DK ++L+ V ++ +K T++ +
Sbjct: 47 KRHRDRLN---QELGKLSSLLPFPEDVRA---RLDKLSVLRLIVGYLK-VKSYFTAT--L 97
Query: 117 QQGEVS-SSKPTV----------ITNEVL--GPLLLEALEGFLFVVNPDGYVNFCTENIK 163
+ G V S+ P++ + E+ G LLL+AL+GFL VV DGYV + + ++
Sbjct: 98 KDGSVDCSADPSMNPRREHPFAQVHGELFSEGDLLLQALDGFLVVVTEDGYVFYVSPTVQ 157
Query: 164 SFIRYSRQEVLGKSVYNLIHHGDHARFHN 192
++ + + +++ +SV+ LIH D A F +
Sbjct: 158 DYLGFHQSDIIYQSVFELIHKEDRATFQS 186
>gi|28571685|ref|NP_524340.2| single-minded, isoform A [Drosophila melanogaster]
gi|21744281|gb|AAM76199.1| RE54280p [Drosophila melanogaster]
gi|28381286|gb|AAF54902.3| single-minded, isoform A [Drosophila melanogaster]
Length = 688
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 43 CAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 102
CA+ +++ N + RRE+EN ELA+L+ + ++ + DK ++++ T +
Sbjct: 23 CAMKEKSKNAA---RTRREKENTEFCELAKLLPLPA------AITSQLDKASVIRLTTSY 73
Query: 103 IRNIKQQETSSDAVQQGEVSSSKPTV---ITNEVLGPLLLEALEGFLFVVNPDGYVNFCT 159
+ K ++ D + GE S P + T + LG LL+ L+GF+FVV PDG + + +
Sbjct: 74 L---KMRQVFPDGL--GEAWGSSPAMQRGATIKELGSHLLQTLDGFIFVVAPDGKIMYIS 128
Query: 160 ENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
E + S+ E+ G S++ IH+ D + L H
Sbjct: 129 ETASVHLGLSQVELTGNSIFEYIHNYDQDEMNAILSLHPH 168
>gi|118344038|ref|NP_001071842.1| transcription factor protein [Ciona intestinalis]
gi|70571397|dbj|BAE06738.1| transcription factor protein [Ciona intestinalis]
Length = 753
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 124/264 (46%), Gaps = 36/264 (13%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVN--QIRNIKQQETSSD 114
+ RR +EN ELA+L+ S E+ S L DK +I++ T++ Q++ S++
Sbjct: 76 RSRRGKENFEFYELAKLLPVPS--ETSSQL----DKASIVRLTMSYLQLQKFMLARKSTE 129
Query: 115 AVQQGEV--SSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
+ + +++ + +G +L++L+GF+FV+N DG F ++ + ++ ++ +
Sbjct: 130 PASKPDYFCRAAQQSSFMENCMGSFILQSLDGFIFVLNKDGRFLFVSDTVSIYLGLAQVD 189
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
++G S++N H DH + L S+ + T + + K L A T + +F IR+
Sbjct: 190 LIGTSIFNYTHPADHPELVDHLKNRSNSHHNITRNFHS-SDKNEELEADTSSCSFFIRMK 248
Query: 233 ISST--------------HLTAGLS-----RAGGENG-QDDSGDVSSEGGPCLMCVARRI 272
+ T H+T LS R E+ DD + + L +A+ +
Sbjct: 249 STLTRRGSNVKSIGYKVVHMTGCLSSKIHRRLKVEDASSDDETPTNLDAMLGLTGIAQVL 308
Query: 273 PP---TDKQLSAPIEQFTMKLDRS 293
PP D +L P+ F +++D S
Sbjct: 309 PPPTLIDIKLDQPM--FVVRIDAS 330
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 104 RNIKQQETSSDAVQQGEVSSSKPTVITNEVLGP--LLLEALEGFLFVVNPDG--YVNFCT 159
R +K ++ SSD + + +VL P L+ L+ +FVV D VN+C
Sbjct: 278 RRLKVEDASSDDETPTNLDAMLGLTGIAQVLPPPTLIDIKLDQPMFVVRIDASLRVNYCE 337
Query: 160 ENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNC 193
+ I+ Y+ +V G+++Y+ IH D + C
Sbjct: 338 DRIEQLTDYTMDQVKGRTLYHFIHSSDLTKIRRC 371
>gi|31077159|sp|P05709.3|SIM_DROME RecName: Full=Protein single-minded
Length = 697
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 43 CAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 102
CA+ +++ N + RRE+EN ELA+L+ + ++ + DK ++++ T +
Sbjct: 23 CAMKEKSKNAA---RTRREKENTEFCELAKLLPLPA------AITSQLDKASVIRLTTSY 73
Query: 103 IRNIKQQETSSDAVQQGEVSSSKPTV---ITNEVLGPLLLEALEGFLFVVNPDGYVNFCT 159
+ K ++ D + GE S P + T + LG LL+ L+GF+FVV PDG + + +
Sbjct: 74 L---KMRQVFPDGL--GEAWGSSPAMQRGATIKELGSHLLQTLDGFIFVVAPDGKIMYIS 128
Query: 160 ENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
E + S+ E+ G S++ IH+ D + L H
Sbjct: 129 ETASVHLGLSQVELTGNSIFEYIHNYDQDEMNAILSLHPH 168
>gi|220942606|gb|ACL83846.1| sim-PA [synthetic construct]
Length = 689
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 43 CAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 102
CA+ +++ N + RRE+EN ELA+L+ + ++ + DK ++++ T +
Sbjct: 23 CAMKEKSKNAA---RTRREKENTEFCELAKLLPLPA------AITSQLDKASVIRLTTSY 73
Query: 103 IRNIKQQETSSDAVQQGEVSSSKPTV---ITNEVLGPLLLEALEGFLFVVNPDGYVNFCT 159
+ K ++ D + GE S P + T + LG LL+ L+GF+FVV PDG + + +
Sbjct: 74 L---KMRQVFPDGL--GEAWGSSPAMQRGATIKELGSHLLQTLDGFIFVVAPDGKIMYIS 128
Query: 160 ENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
E + S+ E+ G S++ IH+ D + L H
Sbjct: 129 ETASVHLGLSQVELTGNSIFEYIHNYDQDEMNAILSLHPH 168
>gi|198465431|ref|XP_001353624.2| GA21284 [Drosophila pseudoobscura pseudoobscura]
gi|198150156|gb|EAL31138.2| GA21284 [Drosophila pseudoobscura pseudoobscura]
Length = 436
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N I EL+ +I ++ K DK +L+ V +R I+ S +
Sbjct: 63 EKRRRDKMNKCINELSSMIPMCY------AMQRKLDKLTVLRMAVQHLRGIR----GSGS 112
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ + +P+ ++++ L ++L+A EGFLFVV D G + + +E++ S + ++ ++L
Sbjct: 113 LHPYVGADFRPSFMSDQELKMIILQASEGFLFVVGCDRGRILYVSESVSSVLDCTQADLL 172
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 173 GQSWFDVLHPKD 184
>gi|355560292|gb|EHH16978.1| Class E basic helix-loop-helix protein 15, partial [Macaca mulatta]
Length = 525
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|195571241|ref|XP_002103612.1| GD18883 [Drosophila simulans]
gi|194199539|gb|EDX13115.1| GD18883 [Drosophila simulans]
Length = 697
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 43 CAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 102
CA+ +++ N + RRE+EN ELA+L+ + ++ + DK ++++ T +
Sbjct: 23 CAMKEKSKNAA---RTRREKENTEFCELAKLLPLPA------AITSQLDKASVIRLTTSY 73
Query: 103 IRNIKQQETSSDAVQQGEVSSSKPTV---ITNEVLGPLLLEALEGFLFVVNPDGYVNFCT 159
+ K ++ D + GE S P + T + LG LL+ L+GF+FVV PDG + + +
Sbjct: 74 L---KMRQVFPDGL--GEAWGSSPAMQRGATIKELGSHLLQTLDGFIFVVAPDGKIMYIS 128
Query: 160 ENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
E + S+ E+ G S++ IH+ D + L H
Sbjct: 129 ETASVHLGLSQVELTGNSIFEYIHNYDQDEMNAILSLHPH 168
>gi|355747376|gb|EHH51873.1| Class E basic helix-loop-helix protein 15, partial [Macaca
fascicularis]
Length = 525
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>gi|326922315|ref|XP_003207395.1| PREDICTED: aryl hydrocarbon receptor-like [Meleagris gallopavo]
Length = 915
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 12/144 (8%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-----NIKQQET 111
KR RE+ N +E LA L+ F E + A DK +IL+ + +R + +
Sbjct: 27 KRHRERLNWELERLAALLP---FPEEV---AAGLDKLSILRLSAAFLRAKSFFRVALKNH 80
Query: 112 SSDAVQQGEVSSSKPTVITNEVL-GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSR 170
++ ++ S P + T V G LLL+AL GF+ VV +G + + + I+ ++ + +
Sbjct: 81 DAEGAERDGDHESSPALGTAAVPEGELLLQALNGFVLVVTSEGLIFYSSHTIQDYLGFHQ 140
Query: 171 QEVLGKSVYNLIHHGDHARFHNCL 194
+V+ +S++ LIH DH F L
Sbjct: 141 TDVMHQSIFKLIHAEDHQEFRRNL 164
>gi|321468989|gb|EFX79971.1| hypothetical protein DAPPUDRAFT_346996 [Daphnia pulex]
Length = 869
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N I EL ++ K DK IL+ ++ IRN Q T
Sbjct: 49 LSEKKRRDQFNILINELCSMVCTG---------KRKMDKSTILKSAISFIRN-HNQVTMQ 98
Query: 114 DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
Q+ KP+ ++NE L+LEAL+ F+ V + G + + +ENI + ++ ++
Sbjct: 99 SHCQESVQEDWKPSFLSNEEFTHLMLEALDEFIIVFSSTGKILYVSENITCLLGHTPSDL 158
Query: 174 LGKSVYNLI 182
+G S+ +L+
Sbjct: 159 IGSSLSDLV 167
>gi|37547498|gb|AAN05089.1| aryl hydrocarbon receptor 2 [Sparus aurata]
Length = 525
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 36/272 (13%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ--QETSSD 114
KR R++ N ++ L EL+ F+E + S + DK ++L+ +V +R +K + T
Sbjct: 26 KRHRDRLNGELDRLTELLP---FSEDIRS---RLDKLSVLRLSVGYLR-VKSHFKATMKT 78
Query: 115 AVQQGEVSSSKPTVITNEVL-----GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ G S K N + G LLL+AL GF+ VV +G V + + IK ++ +
Sbjct: 79 SIGSGLFPSVKGHNGNNMDIVGFSEGDLLLQALNGFVIVVTSEGLVFYVSSTIKDYLGFH 138
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQA------------GKRPS 217
+ +V+ +SV+ LIH D A F L +N + +GG + P
Sbjct: 139 QSDVVHQSVFELIHTDDRAFFRQQL---HFALNPPAAGAGGDVLQGCGSTVMYSPEQLPP 195
Query: 218 LTASTPNRTF--NIRLLISSTHLTAGLSRAGG---ENGQDDSGDVSSEGGPCLMCVARRI 272
+S R+F R L+ ++ GL G +G+ +G +E L +A +
Sbjct: 196 ENSSFLERSFVCRFRCLLDNSSGFLGLKFQGRLKYVHGRRVNG-TRNEPQLALFSIAMPV 254
Query: 273 -PPTDKQLSAPIEQFTMKLDRSGTIIGMDTSG 303
PPT ++ A + F K T +G+D+ G
Sbjct: 255 QPPTIVEIRAKMLLFQSKHKLDFTPMGIDSRG 286
>gi|395856625|ref|XP_003800723.1| PREDICTED: single-minded homolog 2 [Otolemur garnettii]
Length = 614
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ ++
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLK-MRAVFPEGLGE 62
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 63 AWGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTGN 122
Query: 177 SVYNLIHHGDH 187
S+Y IH DH
Sbjct: 123 SIYEYIHPSDH 133
>gi|301610093|ref|XP_002934591.1| PREDICTED: neuronal PAS domain-containing protein 2-like [Xenopus
(Silurana) tropicalis]
Length = 753
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 75/134 (55%), Gaps = 9/134 (6%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL ++ +K DK ILQ+T++ ++ K+ ++
Sbjct: 17 SEKKRRDQFNVLIKELCTMLQG-------HGQPLKMDKSTILQKTIDFLQKQKEITAQTE 69
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
A + + KP+ ++NE L+LEAL+GFL +N DG + + ++++ S + + +++
Sbjct: 70 ACEIRQ--DWKPSFLSNEEFTQLMLEALDGFLIALNTDGIIIYVSDSVSSLLGHLPSDMV 127
Query: 175 GKSVYNLIHHGDHA 188
+++ N + + A
Sbjct: 128 DQNILNFLPEREQA 141
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.128 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,654,474,964
Number of Sequences: 23463169
Number of extensions: 221494702
Number of successful extensions: 653163
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1522
Number of HSP's successfully gapped in prelim test: 665
Number of HSP's that attempted gapping in prelim test: 647586
Number of HSP's gapped (non-prelim): 4235
length of query: 383
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 239
effective length of database: 8,980,499,031
effective search space: 2146339268409
effective search space used: 2146339268409
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)