Your job contains 1 sequence.
>psy7682
AKCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRR
EQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGE
VSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYN
LIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTA
GLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMD
TSGVSQTHTQYLNKAVACKTSATVWTCPNSPLTSTKLLLKALLLSICTDYALVQTDTCMY
RSSPSCFGLQGASRTSLWQRIRL
The BLAST search returned 11 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7682
(383 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|I3LNS5 - symbol:I3LNS5 "Uncharacterized protein... 434 6.3e-42 3
UNIPROTKB|D4A3M5 - symbol:Ncoa2 "Nuclear receptor coactiv... 437 9.7e-42 2
UNIPROTKB|F1NDP9 - symbol:NCOA2 "Uncharacterized protein"... 442 1.1e-41 1
RGD|620108 - symbol:Ncoa2 "nuclear receptor coactivator 2... 434 2.4e-41 2
UNIPROTKB|Q9WUI9 - symbol:Ncoa2 "Nuclear receptor coactiv... 434 2.4e-41 2
ZFIN|ZDB-GENE-010406-3 - symbol:ncoa2 "nuclear receptor c... 445 1.4e-40 1
UNIPROTKB|E1BPY4 - symbol:NCOA2 "Uncharacterized protein"... 434 2.1e-40 2
UNIPROTKB|E2QXC0 - symbol:NCOA2 "Uncharacterized protein"... 434 2.1e-40 2
UNIPROTKB|E2QY25 - symbol:NCOA2 "Uncharacterized protein"... 434 2.1e-40 2
UNIPROTKB|F1NDQ6 - symbol:NCOA2 "Uncharacterized protein"... 442 2.8e-40 1
UNIPROTKB|E7EWM1 - symbol:NCOA2 "Nuclear receptor coactiv... 435 6.2e-40 1
MGI|MGI:1276533 - symbol:Ncoa2 "nuclear receptor coactiva... 437 9.5e-40 1
UNIPROTKB|Q15596 - symbol:NCOA2 "Nuclear receptor coactiv... 435 1.6e-39 1
UNIPROTKB|Q5F393 - symbol:NCOA1 "Uncharacterized protein"... 434 2.1e-39 1
UNIPROTKB|E1BRL1 - symbol:NCOA1 "Uncharacterized protein"... 434 2.1e-39 1
UNIPROTKB|B5DE09 - symbol:ncoa2 "Nuclear receptor coactiv... 433 2.5e-39 1
UNIPROTKB|F1SDK1 - symbol:NCOA1 "Nuclear receptor coactiv... 430 4.9e-39 1
UNIPROTKB|Q4PJW2 - symbol:NCOA1 "Nuclear receptor coactiv... 430 5.1e-39 1
UNIPROTKB|F1SDJ9 - symbol:NCOA1 "Nuclear receptor coactiv... 430 5.2e-39 1
UNIPROTKB|J9NT57 - symbol:NCOA1 "Uncharacterized protein"... 428 8.0e-39 1
UNIPROTKB|F6UQE6 - symbol:NCOA1 "Uncharacterized protein"... 428 8.4e-39 1
UNIPROTKB|E2QTR9 - symbol:NCOA1 "Uncharacterized protein"... 428 8.5e-39 1
UNIPROTKB|D4A3Q3 - symbol:Ncoa1 "Protein Ncoa1" species:1... 427 1.0e-38 1
UNIPROTKB|Q15788 - symbol:NCOA1 "Nuclear receptor coactiv... 427 1.1e-38 1
RGD|1309046 - symbol:Ncoa1 "nuclear receptor coactivator ... 427 1.1e-38 1
MGI|MGI:1276523 - symbol:Ncoa1 "nuclear receptor coactiva... 427 1.1e-38 1
UNIPROTKB|Q9W705 - symbol:ncoa2 "Nuclear receptor coactiv... 426 1.5e-38 1
UNIPROTKB|G3N0C2 - symbol:NCOA1 "Uncharacterized protein"... 425 1.6e-38 1
UNIPROTKB|E1BK04 - symbol:NCOA1 "Uncharacterized protein"... 422 2.8e-38 1
UNIPROTKB|C9JCR8 - symbol:NCOA3 "Nuclear receptor coactiv... 419 6.9e-38 1
UNIPROTKB|Q9Y6Q9 - symbol:NCOA3 "Nuclear receptor coactiv... 419 7.5e-38 1
UNIPROTKB|F1NMB5 - symbol:NCOA3 "Uncharacterized protein"... 417 1.2e-37 1
ZFIN|ZDB-GENE-041001-175 - symbol:ncoa1 "nuclear receptor... 409 8.2e-37 1
UNIPROTKB|O57539 - symbol:ncoa3 "Nuclear receptor coactiv... 407 1.4e-36 1
UNIPROTKB|E2R220 - symbol:NCOA3 "Uncharacterized protein"... 407 1.4e-36 1
UNIPROTKB|F1MVD0 - symbol:NCOA3 "Uncharacterized protein"... 406 1.8e-36 1
ZFIN|ZDB-GENE-051107-8 - symbol:ncoa3 "nuclear receptor c... 401 6.8e-36 1
UNIPROTKB|F1LS17 - symbol:Ncoa3 "Nuclear receptor coactiv... 398 1.3e-35 1
UNIPROTKB|F1M8E5 - symbol:Ncoa3 "Nuclear receptor coactiv... 398 1.3e-35 1
UNIPROTKB|D4A1M5 - symbol:Ncoa3 "Nuclear receptor coactiv... 343 3.3e-35 2
UNIPROTKB|D4AB68 - symbol:Ncoa1 "Nuclear receptor coactiv... 379 1.4e-33 1
MGI|MGI:1276535 - symbol:Ncoa3 "nuclear receptor coactiva... 337 1.6e-33 2
UNIPROTKB|F1RU09 - symbol:NCOA2 "Uncharacterized protein"... 282 2.7e-23 1
UNIPROTKB|F1RU10 - symbol:NCOA2 "Uncharacterized protein"... 282 2.9e-23 1
UNIPROTKB|F1SBF0 - symbol:NCOA3 "Uncharacterized protein"... 276 1.3e-22 1
FB|FBgn0041092 - symbol:tai "taiman" species:7227 "Drosop... 225 5.4e-17 2
UNIPROTKB|C9JK03 - symbol:CLOCK "Circadian locomoter outp... 187 3.9e-14 1
UNIPROTKB|Q9DG35 - symbol:BMAL1 "BHLH-PAS transcription f... 170 3.0e-12 1
UNIPROTKB|F1RVI1 - symbol:CLOCK "Uncharacterized protein"... 188 4.7e-12 1
FB|FBgn0264075 - symbol:tgo "tango" species:7227 "Drosoph... 189 8.9e-12 1
MGI|MGI:99698 - symbol:Clock "circadian locomotor output ... 189 1.4e-11 1
UNIPROTKB|F1PSD8 - symbol:CLOCK "Uncharacterized protein"... 188 1.8e-11 1
UNIPROTKB|Q91YB0 - symbol:Clock "Circadian locomoter outp... 188 1.8e-11 1
UNIPROTKB|Q91YB2 - symbol:Clock "Circadian locomoter outp... 188 1.8e-11 1
UNIPROTKB|I3LEG6 - symbol:I3LEG6 "Uncharacterized protein... 162 2.2e-11 1
UNIPROTKB|D4A4R8 - symbol:Clock "Circadian locomoter outp... 187 2.3e-11 1
UNIPROTKB|F1MLT7 - symbol:CLOCK "Uncharacterized protein"... 187 2.3e-11 1
UNIPROTKB|O15516 - symbol:CLOCK "Circadian locomoter outp... 187 2.3e-11 1
UNIPROTKB|Q5RAK8 - symbol:CLOCK "Circadian locomoter outp... 187 2.3e-11 1
UNIPROTKB|F1NKI9 - symbol:CLOCK "Circadian locomoter outp... 187 2.3e-11 1
UNIPROTKB|F1M012 - symbol:Clock "Circadian locomoter outp... 187 2.3e-11 1
UNIPROTKB|F1NKI8 - symbol:CLOCK "Circadian locomoter outp... 187 2.4e-11 1
UNIPROTKB|Q8QGQ6 - symbol:CLOCK "Circadian locomoter outp... 187 2.4e-11 1
UNIPROTKB|F1P1C0 - symbol:CLOCK "Circadian locomoter outp... 187 2.4e-11 1
ZFIN|ZDB-GENE-000509-2 - symbol:arntl2 "aryl hydrocarbon ... 185 2.5e-11 1
UNIPROTKB|F1S6X1 - symbol:LOC100738978 "Uncharacterized p... 175 2.9e-11 1
RGD|620271 - symbol:Clock "clock circadian regulator" spe... 186 3.0e-11 1
UNIPROTKB|Q9WVS9 - symbol:Clock "Circadian locomoter outp... 186 3.0e-11 1
UNIPROTKB|Q91YA8 - symbol:Clock "Circadian locomoter outp... 186 3.1e-11 1
UNIPROTKB|G3N3F0 - symbol:G3N3F0 "Uncharacterized protein... 159 4.8e-11 1
UNIPROTKB|F1RIF2 - symbol:ARNT2 "Uncharacterized protein"... 159 4.8e-11 1
UNIPROTKB|F8W6J9 - symbol:ARNTL "Aryl hydrocarbon recepto... 175 2.4e-10 1
UNIPROTKB|E1BLF5 - symbol:ARNTL "Uncharacterized protein"... 175 3.2e-10 1
UNIPROTKB|O00327 - symbol:ARNTL "Aryl hydrocarbon recepto... 175 3.2e-10 1
UNIPROTKB|A0MLS5 - symbol:ARNTL "Aryl hydrocarbon recepto... 175 3.2e-10 1
UNIPROTKB|O88529 - symbol:ARNTL "Aryl hydrocarbon recepto... 175 3.2e-10 1
UNIPROTKB|Q91YA9 - symbol:Arntl "Aryl hydrocarbon recepto... 175 3.2e-10 1
UNIPROTKB|E2R130 - symbol:ARNTL "Uncharacterized protein"... 175 3.2e-10 1
MGI|MGI:1096381 - symbol:Arntl "aryl hydrocarbon receptor... 175 3.3e-10 1
ZFIN|ZDB-GENE-060126-7 - symbol:arnt "aryl hydrocarbon re... 176 3.3e-10 1
UNIPROTKB|J9NTT7 - symbol:ARNTL "Uncharacterized protein"... 175 3.5e-10 1
ZFIN|ZDB-GENE-030408-1 - symbol:arntl1b "aryl hydrocarbon... 173 5.7e-10 1
WB|WBGene00000095 - symbol:aha-1 species:6239 "Caenorhabd... 169 8.5e-10 1
UNIPROTKB|O02219 - symbol:aha-1 "Aryl hydrocarbon recepto... 169 8.5e-10 1
UNIPROTKB|Q5R4T2 - symbol:ARNTL "Aryl hydrocarbon recepto... 171 9.0e-10 1
UNIPROTKB|C8YTM6 - symbol:aha-1 "AHA-1" species:31234 "Ca... 167 1.1e-09 1
UNIPROTKB|C8YTN2 - symbol:aha-1 "AHA-1" species:31234 "Ca... 167 1.1e-09 1
RGD|62003 - symbol:Arntl "aryl hydrocarbon receptor nucle... 174 1.2e-09 2
UNIPROTKB|Q9EPW1 - symbol:Arntl "Aryl hydrocarbon recepto... 174 1.2e-09 2
UNIPROTKB|A8XEY9 - symbol:aha-1 "Protein CBR-AHA-1" speci... 168 1.2e-09 1
UNIPROTKB|Q9I8T7 - symbol:ARNTL "Aryl hydrocarbon recepto... 170 1.2e-09 1
UNIPROTKB|E3MG64 - symbol:Cre-aha-1 "CRE-AHA-1 protein" s... 167 1.4e-09 1
UNIPROTKB|A6NGV6 - symbol:ARNT "Aryl hydrocarbon receptor... 166 1.5e-09 1
UNIPROTKB|G0P4X6 - symbol:CAEBREN_20344 "Putative unchara... 166 1.8e-09 1
UNIPROTKB|P79832 - symbol:arnt "Aryl hydrocarbon receptor... 169 1.9e-09 1
UNIPROTKB|Q8QGQ7 - symbol:ARNTL2 "Aryl hydrocarbon recept... 168 1.9e-09 1
UNIPROTKB|F1NQL8 - symbol:ARNTL2 "Aryl hydrocarbon recept... 168 1.9e-09 1
UNIPROTKB|E1C1C5 - symbol:ARNTL2 "Aryl hydrocarbon recept... 168 1.9e-09 1
ZFIN|ZDB-GENE-000509-1 - symbol:arntl1a "aryl hydrocarbon... 168 2.0e-09 1
UNIPROTKB|F1N4Q7 - symbol:ARNTL2 "Uncharacterized protein... 150 2.1e-09 2
WARNING: Descriptions of 131 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|I3LNS5 [details] [associations]
symbol:I3LNS5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0035257 "nuclear
hormone receptor binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355 GO:GO:0016573
GO:GO:0006351 GO:GO:0003713 GO:GO:0004871 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0004402 SUPFAM:SSF69125
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109
Ensembl:ENSSSCT00000022649 OMA:DASRRIC Uniprot:I3LNS5
Length = 1428
Score = 434 (157.8 bits), Expect = 6.3e-42, Sum P(3) = 6.3e-42
Identities = 109/264 (41%), Positives = 152/264 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P ++ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKSI-VNG-----GSWSGEPPRRSS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIPPTDKQ 278
L+ E Q + EG CL+CVARR+P ++
Sbjct: 203 LVKPLPDPEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERP 262
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTS 302
+ E FT + D G I +DTS
Sbjct: 263 VLPSSESFTTRQDLQGKITSLDTS 286
Score = 142 (55.0 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q K + +
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 66 YIEEL 70
I+E+
Sbjct: 93 NIDEV 97
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 89 KPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPL 137
+PD + L ++ Q + ++ T SD ++ ++SS T + +G L
Sbjct: 617 RPDGQSRLHDSKGQTKLLQLLTTKSDQMEPSPLASSLSDA-TKDSVGSL 664
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 18/70 (25%), Positives = 28/70 (40%)
Query: 197 SSHQVNAWTSDS-GGQA---GKRP---SLTASTPNRTFNIRLLISSTHLTAGLSRAGGEN 249
+S +N W S GG + + P A+T N+ + +S T G+S
Sbjct: 1313 ASSDMNGWAQGSMGGNSMFSQQSPPHFGPQANTSMYNNNMNISVSMATSTGGMSNMNQMT 1372
Query: 250 GQDDSGDVSS 259
GQ V+S
Sbjct: 1373 GQISMTSVTS 1382
Score = 39 (18.8 bits), Expect = 6.3e-42, Sum P(3) = 6.3e-42
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 279 LSAPIEQFTMKLDRSGTIIGMD-TSGVSQTHTQYLNKAV 316
++ P EQ M + R G GM+ S + T Q N A+
Sbjct: 427 INGPKEQMGMPMGRFGGSGGMNHVSSMQATTPQGSNYAL 465
Score = 38 (18.4 bits), Expect = 6.3e-42, Sum P(3) = 6.3e-42
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 363 SPSCFGLQGASRTS 376
S CFGL G + +S
Sbjct: 582 SKDCFGLYGQAESS 595
>UNIPROTKB|D4A3M5 [details] [associations]
symbol:Ncoa2 "Nuclear receptor coactivator 2" species:10116
"Rattus norvegicus" [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:620108 GO:GO:0005634 GO:GO:0006355
GO:GO:0016573 GO:GO:0006351 GO:GO:0003713 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0004402
SUPFAM:SSF69125 Gene3D:4.10.630.10 InterPro:IPR017426
InterPro:IPR014935 Pfam:PF08832 PIRSF:PIRSF038181 IPI:IPI00388408
Ensembl:ENSRNOT00000011059 ArrayExpress:D4A3M5 Uniprot:D4A3M5
Length = 1396
Score = 437 (158.9 bits), Expect = 9.7e-42, Sum P(2) = 9.7e-42
Identities = 111/266 (41%), Positives = 153/266 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ KSVY+++H GDH F L+P S VN +WT G+ +R S TFN
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNGGSWT----GEPPRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIPPTD 276
R+L+ + E Q + EG CL+CVARR+P +
Sbjct: 201 RMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKE 260
Query: 277 KQLSAPIEQFTMKLDRSGTIIGMDTS 302
+ E FT + D G I +DTS
Sbjct: 261 RPALPSSESFTTRQDLQGKITSLDTS 286
Score = 142 (55.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q K + +
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 66 YIEEL 70
I+E+
Sbjct: 93 NIDEV 97
Score = 48 (22.0 bits), Expect = 9.7e-42, Sum P(2) = 9.7e-42
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 279 LSAPIEQFTMKLDRSGTIIGMD-TSGVSQTHTQYLNKAV 316
++ P EQ +M + R G GM+ SG+ T Q N A+
Sbjct: 427 MNGPREQMSMPMGRFGGSGGMNHVSGMQATTPQGSNYAL 465
Score = 45 (20.9 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 21/71 (29%), Positives = 30/71 (42%)
Query: 196 PSSHQVNAWTSDS-GGQA---GKRP---SLTASTPNRTFNIRLLISSTHLTAGLSRAGGE 248
P+S +N W S GG + + P A+T N+ + +S TAGLS
Sbjct: 1280 PAS-DMNGWAQGSMGGNSMFSQQSPPHFGQQANTSMYNNNMNINVSMATNTAGLSNMNQM 1338
Query: 249 NGQDDSGDVSS 259
GQ V+S
Sbjct: 1339 TGQMSMTSVTS 1349
>UNIPROTKB|F1NDP9 [details] [associations]
symbol:NCOA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0030375 "thyroid hormone receptor coactivator activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0045944 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 GO:GO:0004871 GO:GO:0030375 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00530000063109
EMBL:AADN02048564 EMBL:AADN02048565 EMBL:AADN02048566
EMBL:AADN02048567 EMBL:AADN02048568 EMBL:AADN02048569
EMBL:AADN02048570 EMBL:AADN02048571 EMBL:AADN02048572
EMBL:AADN02048573 EMBL:AADN02048574 EMBL:AADN02048575
EMBL:AADN02048576 EMBL:AADN02048577 EMBL:AADN02048578
EMBL:AADN02048579 EMBL:AADN02048580 EMBL:AADN02048581
EMBL:AADN02048582 EMBL:AADN02048583 EMBL:AADN02048584
EMBL:AADN02048585 EMBL:AADN02048586 EMBL:AADN02048587
EMBL:AADN02048588 EMBL:AADN02048589 EMBL:AADN02048590
EMBL:AADN02048591 EMBL:AADN02048592 EMBL:AADN02048593
IPI:IPI01017379 Ensembl:ENSGALT00000025166 ArrayExpress:F1NDP9
Uniprot:F1NDP9
Length = 395
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 110/265 (41%), Positives = 154/265 (58%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 34 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 91
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVNP+G V F +EN+ ++RY+++
Sbjct: 92 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNPEGNVVFVSENVTQYLRYNQE 151
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ S+Y+++H GDH F L+P S VN G +G P + T N ++
Sbjct: 152 ELMNTSIYSILHVGDHNEFVKILLPKS-LVNG-----GSWSGDTPRRNSHTFNCRMLVKP 205
Query: 232 LISS--------THL---TAGLSRAGGENG-QDDSGDVSSEGGPCLMCVARRIPPTDKQL 279
L S H T N ++D D+ S CL+CVARR P ++ L
Sbjct: 206 LADSEEGHDNQEAHQKYETMQCFAVSQPNSFKEDGEDLQS----CLICVARRAPMKERPL 261
Query: 280 SAPIEQFTMKLDRSGTIIGMDTSGV 304
E FT + D G I +DTS +
Sbjct: 262 LPSSESFTTRQDLQGKITSLDTSSM 286
Score = 141 (54.7 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q + + + +E+
Sbjct: 34 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQ-IRQIKEQEKAAA 90
Query: 66 YIEELAELISAASFAESM 83
E+ + +S +S+
Sbjct: 91 ANEDEVQKADVSSTGQSV 108
>RGD|620108 [details] [associations]
symbol:Ncoa2 "nuclear receptor coactivator 2" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005791 "rough
endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005874 "microtubule" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0008584 "male gonad development" evidence=IEP] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=ISO;IPI] [GO:0021549 "cerebellum
development" evidence=IEP] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030331 "estrogen receptor binding" evidence=IPI]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=ISO] [GO:0030375 "thyroid hormone
receptor coactivator activity" evidence=ISO] [GO:0030425 "dendrite"
evidence=IDA] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0033142 "progesterone receptor binding" evidence=IPI]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0035259 "glucocorticoid receptor binding" evidence=IPI]
[GO:0042974 "retinoic acid receptor binding" evidence=IPI]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043197
"dendritic spine" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045925 "positive
regulation of female receptivity" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IMP] [GO:0046965 "retinoid X receptor
binding" evidence=IPI] [GO:0046966 "thyroid hormone receptor
binding" evidence=IPI] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048786 "presynaptic active zone" evidence=IDA]
[GO:0070182 "DNA polymerase binding" evidence=IPI] [GO:2000324
"positive regulation of glucocorticoid receptor signaling pathway"
evidence=IMP] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:620108 GO:GO:0005634
GO:GO:0005794 GO:GO:0014069 GO:GO:0043025 GO:GO:0005791
GO:GO:0045944 GO:GO:0048786 GO:GO:0016573 GO:GO:0006351
GO:GO:0003682 GO:GO:0008584 GO:GO:0000122 GO:GO:0004871
GO:GO:0030375 GO:GO:0021549 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0005874 GO:GO:0004402 SUPFAM:SSF69125
PDB:3HLV PDB:3HM1 PDB:3L03 PDBsum:3HLV PDBsum:3HM1 PDBsum:3L03
GO:GO:2000324 eggNOG:NOG315556 HOVERGEN:HBG052583
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 HOGENOM:HOG000230947 CTD:10499
KO:K11255 OrthoDB:EOG4QNMVD EMBL:AF136943 IPI:IPI00204051
RefSeq:NP_114010.1 UniGene:Rn.49136 PDB:1XLS PDBsum:1XLS
ProteinModelPortal:Q9WUI9 SMR:Q9WUI9 STRING:Q9WUI9
PhosphoSite:Q9WUI9 PRIDE:Q9WUI9 GeneID:83724 KEGG:rno:83724
UCSC:RGD:620108 InParanoid:Q9WUI9 EvolutionaryTrace:Q9WUI9
NextBio:616305 ArrayExpress:Q9WUI9 Genevestigator:Q9WUI9
GermOnline:ENSRNOG00000007975 GO:GO:0045925 Uniprot:Q9WUI9
Length = 1465
Score = 434 (157.8 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 111/266 (41%), Positives = 153/266 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ KSVY+++H GDH F L+P S VN +WT G+ +R S TFN
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNGGSWT----GEPPRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIPPTD 276
R+L+ + E Q + EG CL+CVARR+P +
Sbjct: 201 RMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDKQSCLICVARRVPMKE 260
Query: 277 KQLSAPIEQFTMKLDRSGTIIGMDTS 302
+ E FT + D G I +DTS
Sbjct: 261 RPALPSSESFTTRQDLQGKITFLDTS 286
Score = 142 (55.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q K + +
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 66 YIEEL 70
I+E+
Sbjct: 93 NIDEV 97
Score = 48 (22.0 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 279 LSAPIEQFTMKLDRSGTIIGMD-TSGVSQTHTQYLNKAV 316
++ P EQ +M + R G GM+ SG+ T Q N A+
Sbjct: 427 MNGPREQMSMPMGRFGGSGGMNHVSGMQATTPQGSNYAL 465
Score = 47 (21.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 21/71 (29%), Positives = 30/71 (42%)
Query: 196 PSSHQVNAWTSDS-GGQA---GKRP---SLTASTPNRTFNIRLLISSTHLTAGLSRAGGE 248
P+S +N W S GG + + P A+T N+ + +S TAGLS
Sbjct: 1349 PAS-DINGWAQGSMGGNSMFSQQSPPHFGQQANTSMYNNNMNINVSMATNTAGLSNMNQM 1407
Query: 249 NGQDDSGDVSS 259
GQ V+S
Sbjct: 1408 TGQMSMTSVTS 1418
>UNIPROTKB|Q9WUI9 [details] [associations]
symbol:Ncoa2 "Nuclear receptor coactivator 2" species:10116
"Rattus norvegicus" [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:620108 GO:GO:0005634
GO:GO:0005794 GO:GO:0014069 GO:GO:0043025 GO:GO:0005791
GO:GO:0045944 GO:GO:0048786 GO:GO:0016573 GO:GO:0006351
GO:GO:0003682 GO:GO:0008584 GO:GO:0000122 GO:GO:0004871
GO:GO:0030375 GO:GO:0021549 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0005874 GO:GO:0004402 SUPFAM:SSF69125
PDB:3HLV PDB:3HM1 PDB:3L03 PDBsum:3HLV PDBsum:3HM1 PDBsum:3L03
GO:GO:2000324 eggNOG:NOG315556 HOVERGEN:HBG052583
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 HOGENOM:HOG000230947 CTD:10499
KO:K11255 OrthoDB:EOG4QNMVD EMBL:AF136943 IPI:IPI00204051
RefSeq:NP_114010.1 UniGene:Rn.49136 PDB:1XLS PDBsum:1XLS
ProteinModelPortal:Q9WUI9 SMR:Q9WUI9 STRING:Q9WUI9
PhosphoSite:Q9WUI9 PRIDE:Q9WUI9 GeneID:83724 KEGG:rno:83724
UCSC:RGD:620108 InParanoid:Q9WUI9 EvolutionaryTrace:Q9WUI9
NextBio:616305 ArrayExpress:Q9WUI9 Genevestigator:Q9WUI9
GermOnline:ENSRNOG00000007975 GO:GO:0045925 Uniprot:Q9WUI9
Length = 1465
Score = 434 (157.8 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 111/266 (41%), Positives = 153/266 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--AWTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ KSVY+++H GDH F L+P S VN +WT G+ +R S TFN
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNGGSWT----GEPPRRNS-------HTFNC 200
Query: 230 RLLISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIPPTD 276
R+L+ + E Q + EG CL+CVARR+P +
Sbjct: 201 RMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDKQSCLICVARRVPMKE 260
Query: 277 KQLSAPIEQFTMKLDRSGTIIGMDTS 302
+ E FT + D G I +DTS
Sbjct: 261 RPALPSSESFTTRQDLQGKITFLDTS 286
Score = 142 (55.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q K + +
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 66 YIEEL 70
I+E+
Sbjct: 93 NIDEV 97
Score = 48 (22.0 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 279 LSAPIEQFTMKLDRSGTIIGMD-TSGVSQTHTQYLNKAV 316
++ P EQ +M + R G GM+ SG+ T Q N A+
Sbjct: 427 MNGPREQMSMPMGRFGGSGGMNHVSGMQATTPQGSNYAL 465
Score = 47 (21.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 21/71 (29%), Positives = 30/71 (42%)
Query: 196 PSSHQVNAWTSDS-GGQA---GKRP---SLTASTPNRTFNIRLLISSTHLTAGLSRAGGE 248
P+S +N W S GG + + P A+T N+ + +S TAGLS
Sbjct: 1349 PAS-DINGWAQGSMGGNSMFSQQSPPHFGQQANTSMYNNNMNINVSMATNTAGLSNMNQM 1407
Query: 249 NGQDDSGDVSS 259
GQ V+S
Sbjct: 1408 TGQMSMTSVTS 1418
>ZFIN|ZDB-GENE-010406-3 [details] [associations]
symbol:ncoa2 "nuclear receptor coactivator 2"
species:7955 "Danio rerio" [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0035257
"nuclear hormone receptor binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0046966 "thyroid
hormone receptor binding" evidence=IPI] [GO:0009790 "embryo
development" evidence=IMP] [GO:0030099 "myeloid cell
differentiation" evidence=IMP] [GO:0030851 "granulocyte
differentiation" evidence=IMP] [GO:0060215 "primitive hemopoiesis"
evidence=IMP] [GO:0030375 "thyroid hormone receptor coactivator
activity" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 ZFIN:ZDB-GENE-010406-3 GO:GO:0005634 GO:GO:0006355
GO:GO:0030851 GO:GO:0016573 GO:GO:0006351 GO:GO:0004871
GO:GO:0030375 Gene3D:4.10.280.10 GO:GO:0004402 SUPFAM:SSF69125
eggNOG:NOG315556 HOVERGEN:HBG052583 Gene3D:4.10.630.10
InterPro:IPR017426 InterPro:IPR014935 Pfam:PF08832
PIRSF:PIRSF038181 HOGENOM:HOG000230947 EMBL:AF323989 EMBL:AY210802
EMBL:BC163724 IPI:IPI00510867 IPI:IPI00915626 RefSeq:NP_571852.1
UniGene:Dr.132753 HSSP:Q15596 ProteinModelPortal:Q98TW1
STRING:Q98TW1 PRIDE:Q98TW1 GeneID:81884 KEGG:dre:81884 CTD:10499
InParanoid:Q98TW1 KO:K11255 OrthoDB:EOG4QNMVD NextBio:20934178
ArrayExpress:Q98TW1 GO:GO:0060215 Uniprot:Q98TW1
Length = 1505
Score = 445 (161.7 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 111/264 (42%), Positives = 160/264 (60%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR RE E+ YIEELAELI A +F + + + VKPDKCAIL+ETV QIR IK+QE ++
Sbjct: 36 EKRNREHESKYIEELAELIFA-NFND-IDNFNVKPDKCAILKETVKQIRQIKEQEKAAAA 93
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G + F +EN+ ++RY+++
Sbjct: 94 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNMEGNIVFVSENVTQYLRYNQE 153
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P SH VN W+S++ +R S TFN
Sbjct: 154 ELMNTSVYSILHVGDHAEFIKNLLPKSH-VNGVPWSSENP----RRNS-------HTFNC 201
Query: 230 RLLI---SSTHLTAGL-SRAGGENGQ----DDSGDVSSEGGP---CLMCVARRIPPTDKQ 278
R+L+ S T ++ E Q + + EG CL+CVARR+P ++
Sbjct: 202 RMLVNPHSEAEETQDHEAQQKYETMQCFAVSEPKSIKEEGEDFQSCLICVARRVPMKERP 261
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTS 302
+ E FT + D G I +DTS
Sbjct: 262 MLPTQESFTTRQDLQGKITSLDTS 285
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR RE E+ YIEELAELI A +F + + + VKPDKCAIL+ETV Q + + + +E+
Sbjct: 36 EKRNREHESKYIEELAELIFA-NFND-IDNFNVKPDKCAILKETVKQ-IRQIKEQEKAAA 92
Query: 66 YIEELAELISAASFAESM 83
E+ + +S +S+
Sbjct: 93 ANEDEVQKADVSSTGQSV 110
>UNIPROTKB|E1BPY4 [details] [associations]
symbol:NCOA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0030375 "thyroid hormone
receptor coactivator activity" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0035257 "nuclear hormone receptor
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045944 GO:GO:0016573 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 GO:GO:0004871 GO:GO:0030375 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0004402 SUPFAM:SSF69125
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109
CTD:10499 KO:K11255 OMA:TAPWPDS EMBL:DAAA02038783 IPI:IPI01003388
RefSeq:XP_584905.6 Ensembl:ENSBTAT00000027071 GeneID:508162
KEGG:bta:508162 Uniprot:E1BPY4
Length = 1465
Score = 434 (157.8 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 109/264 (41%), Positives = 151/264 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKSI-VNG-----GAWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIPPTDKQ 278
L+ + E Q + EG CL+CVARR+P ++
Sbjct: 203 LVKPLPESEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERP 262
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTS 302
E FT + D G I +DTS
Sbjct: 263 ALPSSESFTTRQDLQGKITSLDTS 286
Score = 142 (55.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q K + +
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 66 YIEEL 70
I+E+
Sbjct: 93 NIDEV 97
Score = 39 (18.8 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 279 LSAPIEQFTMKLDRSGTIIGMD-TSGVSQTHTQYLNKAV 316
++ P EQ M + R G GM+ S + T Q N A+
Sbjct: 427 MNGPKEQMGMPMGRFGGSGGMNHVSSMQATTPQGSNYAL 465
>UNIPROTKB|E2QXC0 [details] [associations]
symbol:NCOA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355 GO:GO:0016573
GO:GO:0006351 GO:GO:0003713 GO:GO:0004871 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0004402 SUPFAM:SSF69125
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109
CTD:10499 KO:K11255 OMA:TAPWPDS EMBL:AAEX03015853 EMBL:AAEX03015854
RefSeq:XP_544118.2 Ensembl:ENSCAFT00000012549 GeneID:486989
KEGG:cfa:486989 Uniprot:E2QXC0
Length = 1465
Score = 434 (157.8 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 109/264 (41%), Positives = 151/264 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY ++H GDH F L+P S VN G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYGILHVGDHTEFVKNLLPKSI-VNG-----GSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIPPTDKQ 278
L+ + E Q + EG CL+CVARR+P ++
Sbjct: 203 LVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERP 262
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTS 302
+ E FT + D G I +DTS
Sbjct: 263 VLPSSESFTTRQDLQGKITSLDTS 286
Score = 142 (55.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q K + +
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 66 YIEEL 70
I+E+
Sbjct: 93 NIDEV 97
Score = 39 (18.8 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 279 LSAPIEQFTMKLDRSGTIIGMD-TSGVSQTHTQYLNKAV 316
++ P EQ M + R G GM+ S + T Q N A+
Sbjct: 427 INGPKEQMGMPMGRFGGSGGMNHVSSMQATTPQGSNYAL 465
>UNIPROTKB|E2QY25 [details] [associations]
symbol:NCOA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0030375 "thyroid
hormone receptor coactivator activity" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0035257 "nuclear hormone receptor
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045944 GO:GO:0016573 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 GO:GO:0004871 GO:GO:0030375 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0004402 SUPFAM:SSF69125
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109
EMBL:AAEX03015853 EMBL:AAEX03015854 Ensembl:ENSCAFT00000012540
Uniprot:E2QY25
Length = 1465
Score = 434 (157.8 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 109/264 (41%), Positives = 151/264 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY ++H GDH F L+P S VN G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYGILHVGDHTEFVKNLLPKSI-VNG-----GSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIPPTDKQ 278
L+ + E Q + EG CL+CVARR+P ++
Sbjct: 203 LVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERP 262
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTS 302
+ E FT + D G I +DTS
Sbjct: 263 VLPSSESFTTRQDLQGKITSLDTS 286
Score = 142 (55.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q K + +
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 66 YIEEL 70
I+E+
Sbjct: 93 NIDEV 97
Score = 39 (18.8 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 279 LSAPIEQFTMKLDRSGTIIGMD-TSGVSQTHTQYLNKAV 316
++ P EQ M + R G GM+ S + T Q N A+
Sbjct: 427 INGPKEQMGMPMGRFGGSGGMNHVSSMQATTPQGSNYAL 465
>UNIPROTKB|F1NDQ6 [details] [associations]
symbol:NCOA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0030375 "thyroid hormone receptor coactivator activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR000014
InterPro:IPR008955 InterPro:IPR009110 InterPro:IPR010011
InterPro:IPR011598 InterPro:IPR014920 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0045944
GO:GO:0016573 GO:GO:0006351 GO:GO:0003682 GO:GO:0000122
GO:GO:0004871 GO:GO:0030375 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0004402 SUPFAM:SSF69125 Gene3D:4.10.630.10
InterPro:IPR017426 InterPro:IPR014935 Pfam:PF08832
PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109 OMA:TAPWPDS
EMBL:AADN02048564 EMBL:AADN02048565 EMBL:AADN02048566
EMBL:AADN02048567 EMBL:AADN02048568 EMBL:AADN02048569
EMBL:AADN02048570 EMBL:AADN02048571 EMBL:AADN02048572
EMBL:AADN02048573 EMBL:AADN02048574 EMBL:AADN02048575
EMBL:AADN02048576 EMBL:AADN02048577 EMBL:AADN02048578
EMBL:AADN02048579 EMBL:AADN02048580 EMBL:AADN02048581
EMBL:AADN02048582 EMBL:AADN02048583 EMBL:AADN02048584
EMBL:AADN02048585 EMBL:AADN02048586 EMBL:AADN02048587
EMBL:AADN02048588 EMBL:AADN02048589 EMBL:AADN02048590
EMBL:AADN02048591 EMBL:AADN02048592 EMBL:AADN02048593
IPI:IPI00580931 Ensembl:ENSGALT00000025163 ArrayExpress:F1NDQ6
Uniprot:F1NDQ6
Length = 1463
Score = 442 (160.7 bits), Expect = 2.8e-40, P = 2.8e-40
Identities = 110/265 (41%), Positives = 154/265 (58%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 34 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 91
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVNP+G V F +EN+ ++RY+++
Sbjct: 92 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNPEGNVVFVSENVTQYLRYNQE 151
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ S+Y+++H GDH F L+P S VN G +G P + T N ++
Sbjct: 152 ELMNTSIYSILHVGDHNEFVKILLPKS-LVNG-----GSWSGDTPRRNSHTFNCRMLVKP 205
Query: 232 LISS--------THL---TAGLSRAGGENG-QDDSGDVSSEGGPCLMCVARRIPPTDKQL 279
L S H T N ++D D+ S CL+CVARR P ++ L
Sbjct: 206 LADSEEGHDNQEAHQKYETMQCFAVSQPNSFKEDGEDLQS----CLICVARRAPMKERPL 261
Query: 280 SAPIEQFTMKLDRSGTIIGMDTSGV 304
E FT + D G I +DTS +
Sbjct: 262 LPSSESFTTRQDLQGKITSLDTSSM 286
Score = 141 (54.7 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 35/78 (44%), Positives = 50/78 (64%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q + + + +E+
Sbjct: 34 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQ-IRQIKEQEKAAA 90
Query: 66 YIEELAELISAASFAESM 83
E+ + +S +S+
Sbjct: 91 ANEDEVQKADVSSTGQSV 108
>UNIPROTKB|E7EWM1 [details] [associations]
symbol:NCOA2 "Nuclear receptor coactivator 2" species:9606
"Homo sapiens" [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00989 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0016573
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0004402 Gene3D:4.10.630.10 InterPro:IPR014935
Pfam:PF08832 HGNC:HGNC:7669 ChiTaRS:NCOA2 EMBL:AC021558
EMBL:AC022730 EMBL:AC084251 EMBL:AC090731 IPI:IPI00983197
ProteinModelPortal:E7EWM1 SMR:E7EWM1 PRIDE:E7EWM1
Ensembl:ENST00000518287 ArrayExpress:E7EWM1 Bgee:E7EWM1
Uniprot:E7EWM1
Length = 942
Score = 435 (158.2 bits), Expect = 6.2e-40, P = 6.2e-40
Identities = 109/264 (41%), Positives = 152/264 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKSI-VNG-----GSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIPPTDKQ 278
L+ + E Q + EG CL+CVARR+P ++
Sbjct: 203 LVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERP 262
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTS 302
+ E FT + D G I +DTS
Sbjct: 263 VLPSSESFTTRQDLQGKITSLDTS 286
Score = 142 (55.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q K + +
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 66 YIEEL 70
I+E+
Sbjct: 93 NIDEV 97
>MGI|MGI:1276533 [details] [associations]
symbol:Ncoa2 "nuclear receptor coactivator 2" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IGI;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005791
"rough endoplasmic reticulum" evidence=ISO] [GO:0005794 "Golgi
apparatus" evidence=ISO] [GO:0005874 "microtubule" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=ISO] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISO]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030331
"estrogen receptor binding" evidence=ISO] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=ISO;IDA] [GO:0030375 "thyroid hormone receptor
coactivator activity" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0033142 "progesterone receptor binding" evidence=ISO]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0035259 "glucocorticoid receptor binding" evidence=ISO]
[GO:0042974 "retinoic acid receptor binding" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043197
"dendritic spine" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045925 "positive
regulation of female receptivity" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IGI] [GO:0046965 "retinoid X receptor
binding" evidence=ISO] [GO:0046966 "thyroid hormone receptor
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048786 "presynaptic active zone" evidence=ISO]
[GO:0070182 "DNA polymerase binding" evidence=ISO] [GO:2000324
"positive regulation of glucocorticoid receptor signaling pathway"
evidence=ISO] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:1276533 GO:GO:0005794
GO:GO:0005737 GO:GO:0005654 GO:GO:0014069 GO:GO:0043025
GO:GO:0005791 GO:GO:0045944 GO:GO:0005102 GO:GO:0048786
GO:GO:0016573 GO:GO:0006351 GO:GO:0003682 GO:GO:0000122
Reactome:REACT_127416 GO:GO:0004871 GO:GO:0030375 GO:GO:0021549
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0005874
PDB:2QPY PDBsum:2QPY GO:GO:0004402 SUPFAM:SSF69125
Reactome:REACT_27166 PDB:1L2I PDB:2Q6J PDB:2QA6 PDB:2QA8 PDB:2QAB
PDB:2QGT PDB:2QGW PDB:2QH6 PDB:2QR9 PDB:2QSE PDB:2QXM PDB:2QZO
PDBsum:1L2I PDBsum:2Q6J PDBsum:2QA6 PDBsum:2QA8 PDBsum:2QAB
PDBsum:2QGT PDBsum:2QGW PDBsum:2QH6 PDBsum:2QR9 PDBsum:2QSE
PDBsum:2QXM PDBsum:2QZO PDB:3MNE PDB:3MNO PDB:3MNP PDBsum:3MNE
PDBsum:3MNO PDBsum:3MNP CleanEx:MM_GRIP1 eggNOG:NOG315556
HOVERGEN:HBG052583 Gene3D:4.10.630.10 InterPro:IPR017426
InterPro:IPR014935 Pfam:PF08832 PIRSF:PIRSF038181
GeneTree:ENSGT00530000063109 HOGENOM:HOG000230947 CTD:10499
KO:K11255 OMA:TAPWPDS ChiTaRS:NCOA2 EMBL:U39060 EMBL:AF000582
EMBL:AC091248 EMBL:AC121538 IPI:IPI00116968 PIR:T30193 PIR:T42639
RefSeq:NP_032704.2 UniGene:Mm.2537 PDB:1OSV PDB:1WM0 PDBsum:1OSV
PDBsum:1WM0 ProteinModelPortal:Q61026 SMR:Q61026 DIP:DIP-5979N
MINT:MINT-236676 STRING:Q61026 PhosphoSite:Q61026 PaxDb:Q61026
PRIDE:Q61026 Ensembl:ENSMUST00000006037 GeneID:17978 KEGG:mmu:17978
UCSC:uc007aim.1 InParanoid:Q61026 EvolutionaryTrace:Q61026
NextBio:292941 Bgee:Q61026 CleanEx:MM_NCOA2 Genevestigator:Q61026
GermOnline:ENSMUSG00000005886 Uniprot:Q61026
Length = 1462
Score = 437 (158.9 bits), Expect = 9.5e-40, P = 9.5e-40
Identities = 109/264 (41%), Positives = 152/264 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P ++ TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKS-MVNG-----GSWSGEPPRRSS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIPPTDKQ 278
L+ + E Q + EG CL+CVARR+P ++
Sbjct: 203 LVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERP 262
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTS 302
E FT + D G I +DTS
Sbjct: 263 TLPSSESFTTRQDLQGKITSLDTS 286
Score = 142 (55.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q K + +
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 66 YIEEL 70
I+E+
Sbjct: 93 NIDEV 97
Score = 42 (19.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 196 PSSHQVNAWTSDS-GGQA---GKRP---SLTASTPNRTFNIRLLISSTHLTAGLSRAGGE 248
P+S +N W S GG + + P A+T + N+ + +S T GLS
Sbjct: 1347 PTS-DMNGWAQGSMGGNSMFSQQSPPHFGQQANTSMYSNNMNISVSMATNTGGLSSMNQM 1405
Query: 249 NGQDDSGDVSS 259
GQ V+S
Sbjct: 1406 TGQMSMTSVTS 1416
>UNIPROTKB|Q15596 [details] [associations]
symbol:NCOA2 "Nuclear receptor coactivator 2" species:9606
"Homo sapiens" [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030375 "thyroid hormone receptor coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0030521
"androgen receptor signaling pathway" evidence=RCA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005794
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0014069 GO:GO:0006355
GO:GO:0044281 GO:GO:0043025 GO:GO:0005791
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0045944 GO:GO:0048786
GO:GO:0016573 GO:GO:0044255 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 GO:GO:0004871 GO:GO:0030375 GO:GO:0021549
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
Pathway_Interaction_DB:ar_pathway
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0005874 PDB:1T63
PDB:1T65 PDB:2AO6 PDB:2Q7J PDB:2Q7L PDBsum:1T63 PDBsum:1T65
PDBsum:2AO6 PDBsum:2Q7J PDBsum:2Q7L
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030374 GO:GO:0004402
SUPFAM:SSF69125 PDB:1GWQ PDB:1GWR PDB:1ZKY PDB:2B1V PDB:2B1Z
PDB:2B23 PDB:2FAI PDB:2G44 PDB:2G5O PDB:2P15 PDB:3Q95 PDB:3Q97
PDBsum:1GWQ PDBsum:1GWR PDBsum:1ZKY PDBsum:2B1V PDBsum:2B1Z
PDBsum:2B23 PDBsum:2FAI PDBsum:2G44 PDBsum:2G5O PDBsum:2P15
PDBsum:3Q95 PDBsum:3Q97 PDB:1M2Z PDB:1P93 PDB:3CLD PDB:3E7C
PDB:3K22 PDBsum:1M2Z PDBsum:1P93 PDBsum:3CLD PDBsum:3E7C
PDBsum:3K22 eggNOG:NOG315556 HOVERGEN:HBG052583 Gene3D:4.10.630.10
InterPro:IPR017426 InterPro:IPR014935 Pfam:PF08832
PIRSF:PIRSF038181 HOGENOM:HOG000230947 CTD:10499 KO:K11255
EMBL:X97674 EMBL:BC114383 IPI:IPI00018251 RefSeq:NP_006531.1
UniGene:Hs.446678 PDB:1MV9 PDB:1MVC PDB:1MZN PDB:1UHL PDB:1YOK
PDB:1ZDT PDB:1ZDU PDB:2P1T PDB:2P1U PDB:2P1V PDB:2ZXZ PDB:2ZY0
PDB:3A9E PDB:3DZU PDB:3DZY PDB:3E00 PDB:3E94 PDB:3FUG PDB:3GN8
PDB:3KWY PDB:3KYT PDB:3L0E PDB:3L0J PDB:3L0L PDB:3O1D PDB:3O1E
PDB:3OAP PDB:3OZJ PDB:3PCU PDB:3PLZ PDB:3R5M PDB:3UP0 PDB:3UP3
PDB:4DOS PDB:4E2J PDB:4FHH PDB:4FHI PDBsum:1MV9 PDBsum:1MVC
PDBsum:1MZN PDBsum:1UHL PDBsum:1YOK PDBsum:1ZDT PDBsum:1ZDU
PDBsum:2P1T PDBsum:2P1U PDBsum:2P1V PDBsum:2ZXZ PDBsum:2ZY0
PDBsum:3A9E PDBsum:3DZU PDBsum:3DZY PDBsum:3E00 PDBsum:3E94
PDBsum:3FUG PDBsum:3GN8 PDBsum:3KWY PDBsum:3KYT PDBsum:3L0E
PDBsum:3L0J PDBsum:3L0L PDBsum:3O1D PDBsum:3O1E PDBsum:3OAP
PDBsum:3OZJ PDBsum:3PCU PDBsum:3PLZ PDBsum:3R5M PDBsum:3UP0
PDBsum:3UP3 PDBsum:4DOS PDBsum:4E2J PDBsum:4FHH PDBsum:4FHI
ProteinModelPortal:Q15596 SMR:Q15596 DIP:DIP-5997N IntAct:Q15596
MINT:MINT-122867 STRING:Q15596 PhosphoSite:Q15596 DMDM:13626594
PaxDb:Q15596 PRIDE:Q15596 Ensembl:ENST00000452400 GeneID:10499
KEGG:hsa:10499 UCSC:uc003xyn.1 GeneCards:GC08M071016 HGNC:HGNC:7669
MIM:601993 neXtProt:NX_Q15596 PharmGKB:PA31471 InParanoid:Q15596
OMA:TAPWPDS PhylomeDB:Q15596 ChEMBL:CHEMBL1615341 ChiTaRS:NCOA2
EvolutionaryTrace:Q15596 GenomeRNAi:10499 NextBio:39840
ArrayExpress:Q15596 Bgee:Q15596 CleanEx:HS_NCOA2
Genevestigator:Q15596 GermOnline:ENSG00000140396 Uniprot:Q15596
Length = 1464
Score = 435 (158.2 bits), Expect = 1.6e-39, P = 1.6e-39
Identities = 109/264 (41%), Positives = 152/264 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+QE ++
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ KSVY+++H GDH F L+P S VN G +G+ P + TFN R+
Sbjct: 153 ELMNKSVYSILHVGDHTEFVKNLLPKSI-VNG-----GSWSGEPPRRNS----HTFNCRM 202
Query: 232 LISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIPPTDKQ 278
L+ + E Q + EG CL+CVARR+P ++
Sbjct: 203 LVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERP 262
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTS 302
+ E FT + D G I +DTS
Sbjct: 263 VLPSSESFTTRQDLQGKITSLDTS 286
Score = 142 (55.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 34/65 (52%), Positives = 43/65 (66%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q K + +
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQEKAAAA 92
Query: 66 YIEEL 70
I+E+
Sbjct: 93 NIDEV 97
>UNIPROTKB|Q5F393 [details] [associations]
symbol:NCOA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00010 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0016573
GO:GO:0006351 GO:GO:0003713 GO:GO:0004871 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0004402 SUPFAM:SSF69125
CTD:8648 eggNOG:NOG315556 HOVERGEN:HBG052583 KO:K09101
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109
HOGENOM:HOG000230947 EMBL:AADN02018374 EMBL:AADN02018375
EMBL:AADN02018376 EMBL:AADN02018377 EMBL:AADN02018378
EMBL:AADN02018379 EMBL:AADN02018380 EMBL:AADN02018381 EMBL:AJ851757
IPI:IPI00600648 RefSeq:NP_001012900.1 UniGene:Gga.3317 SMR:Q5F393
STRING:Q5F393 Ensembl:ENSGALT00000026819 GeneID:422016
KEGG:gga:422016 NextBio:20824707 Uniprot:Q5F393
Length = 1510
Score = 434 (157.8 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 106/263 (40%), Positives = 154/263 (58%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIK---QQET 111
NEKRRREQEN Y+EELAEL+SA + + + +L+VKPDKC IL++TV+QI+ +K Q++
Sbjct: 30 NEKRRREQENKYLEELAELLSA-NIGD-IDTLSVKPDKCKILKKTVDQIQQMKRLEQEKA 87
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 88 ADDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTSYLGYNQE 147
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGK--------RPSLTAS 221
E++ SVY+++H GDH F L+P S VN W ++ + RP
Sbjct: 148 ELMNTSVYSILHVGDHTEFVKNLLPKS-LVNGVPWPQEATRRNSHTFSCRMLIRPPDEPG 206
Query: 222 TPNRTFNIRLLISSTHLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSA 281
T N+ R + T ++ E G+D CL+C+ARR+P
Sbjct: 207 TENQEARQRYEVMQC-FTVSQPKSFKEEGEDFQS--------CLICIARRLPRP--AAVT 255
Query: 282 PIEQFTMKLDRSGTIIGMDTSGV 304
P E F K D +G II +DTS +
Sbjct: 256 PSESFVTKQDTTGKIISIDTSSL 278
Score = 168 (64.2 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 39/75 (52%), Positives = 57/75 (76%)
Query: 5 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQEN 64
NEKRRREQEN Y+EELAEL+SA + + + +L+VKPDKC IL++TV+Q + + +R EQE
Sbjct: 30 NEKRRREQENKYLEELAELLSA-NIGD-IDTLSVKPDKCKILKKTVDQ-IQQMKRLEQEK 86
Query: 65 NYIEELAEL-ISAAS 78
+E+ + IS++S
Sbjct: 87 AADDEVQKSDISSSS 101
>UNIPROTKB|E1BRL1 [details] [associations]
symbol:NCOA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000435 "positive regulation of transcription
from RNA polymerase II promoter by galactose" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=IEA] [GO:0035257 "nuclear hormone
receptor binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043967 "histone H4
acetylation" evidence=IEA] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:2001038 "regulation of
cellular response to drug" evidence=IEA] InterPro:IPR000014
InterPro:IPR008955 InterPro:IPR009110 InterPro:IPR010011
InterPro:IPR011598 InterPro:IPR013767 InterPro:IPR014920
Pfam:PF00010 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0043065 GO:GO:0000790
GO:GO:0004871 GO:GO:0043967 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0030374 GO:GO:0004402 SUPFAM:SSF69125
GO:GO:0000435 GO:GO:2001038 OMA:QITPQPP Gene3D:4.10.630.10
InterPro:IPR017426 InterPro:IPR014935 Pfam:PF08832
PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109 EMBL:AADN02018374
EMBL:AADN02018375 EMBL:AADN02018376 EMBL:AADN02018377
EMBL:AADN02018378 EMBL:AADN02018379 EMBL:AADN02018380
EMBL:AADN02018381 IPI:IPI00596762 Ensembl:ENSGALT00000026818
ArrayExpress:E1BRL1 Uniprot:E1BRL1
Length = 1512
Score = 434 (157.8 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 106/263 (40%), Positives = 154/263 (58%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIK---QQET 111
NEKRRREQEN Y+EELAEL+SA + + + +L+VKPDKC IL++TV+QI+ +K Q++
Sbjct: 30 NEKRRREQENKYLEELAELLSA-NIGD-IDTLSVKPDKCKILKKTVDQIQQMKRLEQEKA 87
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 88 ADDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNREGRIVFVSENVTSYLGYNQE 147
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGK--------RPSLTAS 221
E++ SVY+++H GDH F L+P S VN W ++ + RP
Sbjct: 148 ELMNTSVYSILHVGDHTEFVKNLLPKS-LVNGVPWPQEATRRNSHTFSCRMLIRPPDEPG 206
Query: 222 TPNRTFNIRLLISSTHLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSA 281
T N+ R + T ++ E G+D CL+C+ARR+P
Sbjct: 207 TENQEARQRYEVMQC-FTVSQPKSFKEEGEDFQS--------CLICIARRLPRP--AAVT 255
Query: 282 PIEQFTMKLDRSGTIIGMDTSGV 304
P E F K D +G II +DTS +
Sbjct: 256 PSESFVTKQDTTGKIISIDTSSL 278
Score = 168 (64.2 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 39/75 (52%), Positives = 57/75 (76%)
Query: 5 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQEN 64
NEKRRREQEN Y+EELAEL+SA + + + +L+VKPDKC IL++TV+Q + + +R EQE
Sbjct: 30 NEKRRREQENKYLEELAELLSA-NIGD-IDTLSVKPDKCKILKKTVDQ-IQQMKRLEQEK 86
Query: 65 NYIEELAEL-ISAAS 78
+E+ + IS++S
Sbjct: 87 AADDEVQKSDISSSS 101
>UNIPROTKB|B5DE09 [details] [associations]
symbol:ncoa2 "Nuclear receptor coactivator 2" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0030375 "thyroid hormone receptor coactivator activity"
evidence=ISS] [GO:0035556 "intracellular signal transduction"
evidence=ISS] [GO:0046966 "thyroid hormone receptor binding"
evidence=ISS] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0035556
GO:GO:0016573 GO:GO:0006351 GO:GO:0009790 GO:GO:0004871
GO:GO:0030375 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0046966
GO:GO:0004402 SUPFAM:SSF69125 eggNOG:NOG315556 HOVERGEN:HBG052583
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 HOGENOM:HOG000230947 CTD:10499
KO:K11255 EMBL:BC168483 RefSeq:NP_001135631.1 UniGene:Str.16314
STRING:B5DE09 GeneID:100216190 KEGG:xtr:100216190
Xenbase:XB-GENE-482311 Uniprot:B5DE09
Length = 1440
Score = 433 (157.5 bits), Expect = 2.5e-39, P = 2.5e-39
Identities = 110/266 (41%), Positives = 154/266 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + +L KPDKCAIL+ETV QIR IK+ E ++
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNLNFKPDKCAILKETVKQIRQIKEHEKTAAA 92
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 93 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNREGNVVFVSENVTQYLRYNQE 152
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ SVY+++H GDH+ F L+P S VN GG +R S TFN R+
Sbjct: 153 ELMNTSVYSILHVGDHSEFIKNLLPKSI-VN------GGP--RRNS-------HTFNCRM 196
Query: 232 LISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIPPTDKQ 278
L+ G E Q + EG CL+CVARR+P ++
Sbjct: 197 LVKPMMECEEEGHDGQETHQKYETMQCFAVSQPKSIKEEGEDFQSCLICVARRVPMKERP 256
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTSGV 304
+ P E FT + D G I +DT+ +
Sbjct: 257 VPPPSESFTTRQDLQGKITSLDTTNM 282
Score = 144 (55.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + +L KPDKCAIL+ETV Q + + + E+
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNLNFKPDKCAILKETVKQ-IRQIKEHEKTAA 91
Query: 66 YIEELAELISAASFAESM 83
E+ + +S +S+
Sbjct: 92 ANEDEVQKADVSSTGQSV 109
Score = 37 (18.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 118 QGEVSSSKPTVITNEVLGP 136
QG VS+S P +I V GP
Sbjct: 925 QGNVSNSSPGIIG--VNGP 941
>UNIPROTKB|F1SDK1 [details] [associations]
symbol:NCOA1 "Nuclear receptor coactivator 1" species:9823
"Sus scrofa" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0016573 GO:GO:0006351
GO:GO:0003713 GO:GO:0004871 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0004402 SUPFAM:SSF69125 Gene3D:4.10.630.10 InterPro:IPR017426
InterPro:IPR014935 Pfam:PF08832 PIRSF:PIRSF038181
GeneTree:ENSGT00530000063109 EMBL:CU468390 EMBL:CU929972
Ensembl:ENSSSCT00000009390 Uniprot:F1SDK1
Length = 1399
Score = 430 (156.4 bits), Expect = 4.9e-39, P = 4.9e-39
Identities = 113/269 (42%), Positives = 158/269 (58%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKS-LVNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLIS-----STHLTAGLSR---------AGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI T R + ++ Q+D D S CL+C+ARR+P
Sbjct: 198 RMLIHPPDEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLPRP 253
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+ +E F K D +G II +DTS +
Sbjct: 254 PAIMG--VESFMTKQDTTGKIISIDTSSL 280
Score = 161 (61.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q KR ++++
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 66 YIEELAEL-ISAAS 78
+E+ + IS++S
Sbjct: 90 TDDEVQKSDISSSS 103
>UNIPROTKB|Q4PJW2 [details] [associations]
symbol:NCOA1 "Nuclear receptor coactivator 1" species:9823
"Sus scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005634 GO:GO:0045893 GO:GO:0016573 GO:GO:0006351
GO:GO:0003713 GO:GO:0004871 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0004402 SUPFAM:SSF69125 CTD:8648 eggNOG:NOG315556
HOVERGEN:HBG052583 KO:K09101 Gene3D:4.10.630.10 InterPro:IPR017426
InterPro:IPR014935 Pfam:PF08832 PIRSF:PIRSF038181 EMBL:DQ078269
RefSeq:NP_001020399.1 UniGene:Ssc.24299 HSSP:P70365
ProteinModelPortal:Q4PJW2 SMR:Q4PJW2 STRING:Q4PJW2 GeneID:574068
KEGG:ssc:574068 Uniprot:Q4PJW2
Length = 1440
Score = 430 (156.4 bits), Expect = 5.1e-39, P = 5.1e-39
Identities = 113/269 (42%), Positives = 158/269 (58%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKS-LVNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLIS-----STHLTAGLSR---------AGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI T R + ++ Q+D D S CL+C+ARR+P
Sbjct: 198 RMLIHPPDEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLPRP 253
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+ +E F K D +G II +DTS +
Sbjct: 254 PAIMG--VESFMTKQDTTGKIISIDTSSL 280
Score = 161 (61.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q KR ++++
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 66 YIEELAEL-ISAAS 78
+E+ + IS++S
Sbjct: 90 TDDEVQKSDISSSS 103
>UNIPROTKB|F1SDJ9 [details] [associations]
symbol:NCOA1 "Nuclear receptor coactivator 1" species:9823
"Sus scrofa" [GO:2001038 "regulation of cellular response to drug"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0043967 "histone H4 acetylation"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0035257 "nuclear hormone receptor
binding" evidence=IEA] [GO:0030374 "ligand-dependent nuclear
receptor transcription coactivator activity" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000435 "positive regulation of transcription
from RNA polymerase II promoter by galactose" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0043065
GO:GO:0000790 GO:GO:0004871 GO:GO:0043967 GO:GO:0045666
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0030374 GO:GO:0004402
SUPFAM:SSF69125 GO:GO:0000435 GO:GO:2001038 OMA:QITPQPP
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109
EMBL:CU468390 EMBL:CU929972 Ensembl:ENSSSCT00000009391
Uniprot:F1SDJ9
Length = 1441
Score = 430 (156.4 bits), Expect = 5.2e-39, P = 5.2e-39
Identities = 113/269 (42%), Positives = 158/269 (58%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKS-LVNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLIS-----STHLTAGLSR---------AGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI T R + ++ Q+D D S CL+C+ARR+P
Sbjct: 198 RMLIHPPDEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLPRP 253
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+ +E F K D +G II +DTS +
Sbjct: 254 PAIMG--VESFMTKQDTTGKIISIDTSSL 280
Score = 161 (61.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q KR ++++
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 66 YIEELAEL-ISAAS 78
+E+ + IS++S
Sbjct: 90 TDDEVQKSDISSSS 103
>UNIPROTKB|J9NT57 [details] [associations]
symbol:NCOA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0016573 GO:GO:0006351
GO:GO:0003713 GO:GO:0004871 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0004402 SUPFAM:SSF69125 Gene3D:4.10.630.10 InterPro:IPR017426
InterPro:IPR014935 Pfam:PF08832 PIRSF:PIRSF038181
GeneTree:ENSGT00530000063109 EMBL:AAEX03010783
Ensembl:ENSCAFT00000044550 Uniprot:J9NT57
Length = 1398
Score = 428 (155.7 bits), Expect = 8.0e-39, P = 8.0e-39
Identities = 113/269 (42%), Positives = 159/269 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKS-LVNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLIS-----STHLTAGLSR---------AGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI T R + ++ Q+D D S CL+C+ARR+P
Sbjct: 198 RMLIHPPDEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLP-R 252
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ +E F K D +G II +DTS +
Sbjct: 253 PPAITG-VESFMTKQDTTGKIISIDTSSL 280
Score = 161 (61.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q KR ++++
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 66 YIEELAEL-ISAAS 78
+E+ + IS++S
Sbjct: 90 TDDEVQKSDISSSS 103
>UNIPROTKB|F6UQE6 [details] [associations]
symbol:NCOA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 GO:GO:0016573 GO:GO:0006351
GO:GO:0003713 GO:GO:0004871 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0004402 SUPFAM:SSF69125 OMA:QITPQPP Gene3D:4.10.630.10
InterPro:IPR017426 InterPro:IPR014935 Pfam:PF08832
PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109 EMBL:AAEX03010783
Ensembl:ENSCAFT00000006536 Uniprot:F6UQE6
Length = 1440
Score = 428 (155.7 bits), Expect = 8.4e-39, P = 8.4e-39
Identities = 113/269 (42%), Positives = 159/269 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKS-LVNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLIS-----STHLTAGLSR---------AGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI T R + ++ Q+D D S CL+C+ARR+P
Sbjct: 198 RMLIHPPDEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLP-R 252
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ +E F K D +G II +DTS +
Sbjct: 253 PPAITG-VESFMTKQDTTGKIISIDTSSL 280
Score = 161 (61.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q KR ++++
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 66 YIEELAEL-ISAAS 78
+E+ + IS++S
Sbjct: 90 TDDEVQKSDISSSS 103
>UNIPROTKB|E2QTR9 [details] [associations]
symbol:NCOA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001038 "regulation of cellular response to
drug" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0043967 "histone H4 acetylation"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0035257 "nuclear hormone receptor
binding" evidence=IEA] [GO:0030374 "ligand-dependent nuclear
receptor transcription coactivator activity" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000435 "positive regulation of transcription
from RNA polymerase II promoter by galactose" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00010 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
GO:GO:0043065 GO:GO:0000790 GO:GO:0004871 GO:GO:0043967
GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0030374
GO:GO:0004402 SUPFAM:SSF69125 GO:GO:0000435 GO:GO:2001038
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 Ensembl:ENSCAFT00000006536
Uniprot:E2QTR9
Length = 1445
Score = 428 (155.7 bits), Expect = 8.5e-39, P = 8.5e-39
Identities = 113/269 (42%), Positives = 159/269 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 34 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 91
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 92 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 151
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 152 ELMNTSVYSILHVGDHAEFVKNLLPKS-LVNGVPWPQE----ATRRNS-------HTFNC 199
Query: 230 RLLIS-----STHLTAGLSR---------AGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI T R + ++ Q+D D S CL+C+ARR+P
Sbjct: 200 RMLIHPPDEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLP-R 254
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ +E F K D +G II +DTS +
Sbjct: 255 PPAITG-VESFMTKQDTTGKIISIDTSSL 282
Score = 161 (61.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q KR ++++
Sbjct: 34 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 91
Query: 66 YIEELAEL-ISAAS 78
+E+ + IS++S
Sbjct: 92 TDDEVQKSDISSSS 105
>UNIPROTKB|D4A3Q3 [details] [associations]
symbol:Ncoa1 "Protein Ncoa1" species:10116 "Rattus
norvegicus" [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
RGD:1309046 GO:GO:0005634 GO:GO:0006355 GO:GO:0016573 GO:GO:0006351
GO:GO:0003713 GO:GO:0004871 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0004402 SUPFAM:SSF69125 OrthoDB:EOG40K7Z6 Gene3D:4.10.630.10
InterPro:IPR017426 InterPro:IPR014935 Pfam:PF08832
PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109 IPI:IPI00948522
Ensembl:ENSRNOT00000068531 ArrayExpress:D4A3Q3 Uniprot:D4A3Q3
Length = 1397
Score = 427 (155.4 bits), Expect = 1.0e-38, P = 1.0e-38
Identities = 113/269 (42%), Positives = 159/269 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKS-LVNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLIS-----STHLTAGLSR---------AGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI T R + ++ Q+D D S CL+C+ARR+P
Sbjct: 198 RMLIHPPDEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLP-R 252
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ +E F K D +G II +DTS +
Sbjct: 253 PPAITG-VESFMTKQDTTGKIISIDTSSL 280
Score = 160 (61.4 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q + +R EQE +
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQ-IQLMKRMEQEKS 88
Query: 66 YIEE 69
++
Sbjct: 89 TTDD 92
>UNIPROTKB|Q15788 [details] [associations]
symbol:NCOA1 "Nuclear receptor coactivator 1" species:9606
"Homo sapiens" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0043065 "positive regulation
of apoptotic process" evidence=IEA] [GO:0043967 "histone H4
acetylation" evidence=IEA] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IEA] [GO:2001038 "regulation of
cellular response to drug" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IPI] [GO:0003713 "transcription
coactivator activity" evidence=IDA;NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA;NAS]
[GO:0050681 "androgen receptor binding" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0030521 "androgen receptor
signaling pathway" evidence=NAS] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=NAS;IDA] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=IPI] [GO:0035257 "nuclear hormone
receptor binding" evidence=IDA] [GO:0000435 "positive regulation of
transcription from RNA polymerase II promoter by galactose"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=NAS]
[GO:0000790 "nuclear chromatin" evidence=IDA] Reactome:REACT_111217
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
Reactome:REACT_111045 EMBL:CH471053 GO:GO:0005654 GO:GO:0030521
GO:GO:0044281 GO:GO:0032355 GO:GO:0003677
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0044255 GO:GO:0003682
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0043065 GO:GO:0000790
GO:GO:0004871 GO:GO:0032526 GO:GO:0043967 GO:GO:0021549
GO:GO:0032870 GO:GO:0045666 GO:GO:0032570 GO:GO:0060206
Gene3D:4.10.280.10 SUPFAM:SSF47459
Pathway_Interaction_DB:smad2_3nuclearpathway
Pathway_Interaction_DB:retinoic_acid_pathway
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0050681 GO:GO:0001105
GO:GO:0030374 GO:GO:0004402 SUPFAM:SSF69125 PDB:2C52 PDBsum:2C52
EMBL:AC013459 PDB:1KV6 PDB:1TFC PDBsum:1KV6 PDBsum:1TFC PDB:3UU7
PDB:3UUA PDB:3UUD PDBsum:3UU7 PDBsum:3UUA PDBsum:3UUD PDB:1U3R
PDB:1U3S PDB:1X76 PDB:1X78 PDB:1X7B PDB:1X7J PDB:1YY4 PDB:1YYE
PDB:1ZAF PDB:2NV7 PDB:3OLL PDB:3OLS PDB:3OMO PDB:3OMP PDB:3OMQ
PDBsum:1U3R PDBsum:1U3S PDBsum:1X76 PDBsum:1X78 PDBsum:1X7B
PDBsum:1X7J PDBsum:1YY4 PDBsum:1YYE PDBsum:1ZAF PDBsum:2NV7
PDBsum:3OLL PDBsum:3OLS PDBsum:3OMO PDBsum:3OMP PDBsum:3OMQ
GO:GO:0000435 PDB:3BQD PDBsum:3BQD GO:GO:2001038 PDB:1PZL
PDBsum:1PZL PDB:2A3I PDBsum:2A3I EMBL:U59302 EMBL:AJ000881
EMBL:AJ000882 EMBL:U90661 EMBL:EF660499 EMBL:AC093798 EMBL:BC111533
EMBL:BC111534 EMBL:U40396 EMBL:U19179 EMBL:AY633656 IPI:IPI00470490
IPI:IPI00470491 IPI:IPI00470492 PIR:A57620 PIR:PC4363 PIR:PC4364
RefSeq:NP_003734.3 RefSeq:NP_671756.1 RefSeq:NP_671766.1
UniGene:Hs.596314 PDB:1FM6 PDB:1FM9 PDB:1K4W PDB:1K74 PDB:1K7L
PDB:1N4H PDB:1NQ7 PDB:1NRL PDB:1P8D PDB:1RDT PDB:1XIU PDB:1XV9
PDB:1XVP PDB:2FVJ PDB:2GTK PDB:2HBH PDB:2HC4 PDB:2HCD PDB:2HFP
PDB:2NPA PDB:2P54 PDB:2PRG PDB:3BEJ PDB:3CTB PDB:3CWD PDB:3DCT
PDB:3DCU PDB:3DR1 PDB:3ET1 PDB:3ET3 PDB:3FEI PDB:3FEJ PDB:3FUR
PDB:3FXV PDB:3G8I PDB:3G9E PDB:3H0A PDB:3HC5 PDB:3HC6 PDB:3HVL
PDB:3IPQ PDB:3IPS PDB:3IPU PDB:3KMR PDB:3LMP PDB:3OKH PDB:3OKI
PDB:3OLF PDB:3OMK PDB:3OMM PDB:3OOF PDB:3OOK PDB:3P88 PDB:3P89
PDB:3QT0 PDB:3RUT PDB:3RUU PDB:3RVF PDB:3S9S PDB:3T03 PDB:3V9Y
PDB:3VN2 PDB:4DK7 PDB:4DK8 PDB:4DM6 PDB:4DM8 PDB:4DQM PDB:4F9M
PDB:4G1D PDB:4G1Y PDB:4G1Z PDB:4G20 PDB:4G21 PDB:4G2H PDBsum:1FM6
PDBsum:1FM9 PDBsum:1K4W PDBsum:1K74 PDBsum:1K7L PDBsum:1N4H
PDBsum:1NQ7 PDBsum:1NRL PDBsum:1P8D PDBsum:1RDT PDBsum:1XIU
PDBsum:1XV9 PDBsum:1XVP PDBsum:2FVJ PDBsum:2GTK PDBsum:2HBH
PDBsum:2HC4 PDBsum:2HCD PDBsum:2HFP PDBsum:2NPA PDBsum:2P54
PDBsum:2PRG PDBsum:3BEJ PDBsum:3CTB PDBsum:3CWD PDBsum:3DCT
PDBsum:3DCU PDBsum:3DR1 PDBsum:3ET1 PDBsum:3ET3 PDBsum:3FEI
PDBsum:3FEJ PDBsum:3FUR PDBsum:3FXV PDBsum:3G8I PDBsum:3G9E
PDBsum:3H0A PDBsum:3HC5 PDBsum:3HC6 PDBsum:3HVL PDBsum:3IPQ
PDBsum:3IPS PDBsum:3IPU PDBsum:3KMR PDBsum:3LMP PDBsum:3OKH
PDBsum:3OKI PDBsum:3OLF PDBsum:3OMK PDBsum:3OMM PDBsum:3OOF
PDBsum:3OOK PDBsum:3P88 PDBsum:3P89 PDBsum:3QT0 PDBsum:3RUT
PDBsum:3RUU PDBsum:3RVF PDBsum:3S9S PDBsum:3T03 PDBsum:3V9Y
PDBsum:3VN2 PDBsum:4DK7 PDBsum:4DK8 PDBsum:4DM6 PDBsum:4DM8
PDBsum:4DQM PDBsum:4F9M PDBsum:4G1D PDBsum:4G1Y PDBsum:4G1Z
PDBsum:4G20 PDBsum:4G21 PDBsum:4G2H ProteinModelPortal:Q15788
SMR:Q15788 DIP:DIP-30877N IntAct:Q15788 MINT:MINT-153305
STRING:Q15788 PhosphoSite:Q15788 DMDM:158518533 PRIDE:Q15788
Ensembl:ENST00000288599 Ensembl:ENST00000348332
Ensembl:ENST00000395856 Ensembl:ENST00000405141
Ensembl:ENST00000406961 Ensembl:ENST00000538539 GeneID:8648
KEGG:hsa:8648 UCSC:uc002rfj.3 UCSC:uc002rfk.3 UCSC:uc002rfl.3
CTD:8648 GeneCards:GC02P024719 HGNC:HGNC:7668 HPA:CAB019402
MIM:602691 neXtProt:NX_Q15788 PharmGKB:PA31470 eggNOG:NOG315556
HOVERGEN:HBG052583 InParanoid:Q15788 KO:K09101 OMA:QITPQPP
OrthoDB:EOG40K7Z6 PhylomeDB:Q15788 BindingDB:Q15788
ChEMBL:CHEMBL1615387 ChiTaRS:NCOA1 EvolutionaryTrace:Q15788
GenomeRNAi:8648 NextBio:32423 ArrayExpress:Q15788 Bgee:Q15788
Genevestigator:Q15788 GermOnline:ENSG00000084676 Gene3D:4.10.630.10
InterPro:IPR017426 InterPro:IPR014935 Pfam:PF08832
PIRSF:PIRSF038181 Uniprot:Q15788
Length = 1441
Score = 427 (155.4 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 113/269 (42%), Positives = 159/269 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKS-LVNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLIS-----STHLTAGLSR---------AGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI T R + ++ Q+D D S CL+C+ARR+P
Sbjct: 198 RMLIHPPDEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLP-R 252
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ +E F K D +G II +DTS +
Sbjct: 253 PPAITG-VESFMTKQDTTGKIISIDTSSL 280
Score = 160 (61.4 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q + +R EQE +
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQ-IQLMKRMEQEKS 88
Query: 66 YIEE 69
++
Sbjct: 89 TTDD 92
>RGD|1309046 [details] [associations]
symbol:Ncoa1 "nuclear receptor coactivator 1" species:10116
"Rattus norvegicus" [GO:0000435 "positive regulation of
transcription from RNA polymerase II promoter by galactose"
evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001012 "RNA polymerase II regulatory region DNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003713 "transcription
coactivator activity" evidence=IEA;ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;ISO] [GO:0007595
"lactation" evidence=IEP] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008584 "male gonad development"
evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IEP] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISO;IPI] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0021549 "cerebellum development" evidence=IEP]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0021854
"hypothalamus development" evidence=IEP] [GO:0021987 "cerebral
cortex development" evidence=IEP] [GO:0030331 "estrogen receptor
binding" evidence=IPI] [GO:0030374 "ligand-dependent nuclear
receptor transcription coactivator activity" evidence=ISO]
[GO:0032355 "response to estradiol stimulus" evidence=IEP;IMP]
[GO:0032403 "protein complex binding" evidence=IPI] [GO:0032526
"response to retinoic acid" evidence=IMP] [GO:0032570 "response to
progesterone stimulus" evidence=IMP] [GO:0032870 "cellular response
to hormone stimulus" evidence=IMP] [GO:0033142 "progesterone
receptor binding" evidence=IPI] [GO:0035257 "nuclear hormone
receptor binding" evidence=ISO] [GO:0042698 "ovulation cycle"
evidence=IEP] [GO:0042974 "retinoic acid receptor binding"
evidence=IPI] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043967 "histone H4 acetylation" evidence=ISO]
[GO:0045666 "positive regulation of neuron differentiation"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045925 "positive regulation of
female receptivity" evidence=IMP] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO;IMP]
[GO:0046965 "retinoid X receptor binding" evidence=IPI] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0060179 "male mating
behavior" evidence=IMP] [GO:0060206 "estrous cycle phase"
evidence=IEP] [GO:2001038 "regulation of cellular response to drug"
evidence=ISO] [GO:2001141 "regulation of RNA biosynthetic process"
evidence=ISO] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 RGD:1309046 GO:GO:0005634 GO:GO:0005737 GO:GO:0021987
GO:GO:0021766 GO:GO:0032355 GO:GO:0045944 GO:GO:0043005
GO:GO:0006351 GO:GO:0003682 GO:GO:0008584 GO:GO:0043065
GO:GO:0000790 GO:GO:0004871 GO:GO:0032526 GO:GO:0043967
GO:GO:0021549 GO:GO:0032870 GO:GO:0045666 GO:GO:0001012
GO:GO:0032570 GO:GO:0060206 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0007595 GO:GO:0030374 GO:GO:0021854 GO:GO:0004402
SUPFAM:SSF69125 GO:GO:0000435 GO:GO:0060179 GO:GO:2001038
OMA:QITPQPP Gene3D:4.10.630.10 InterPro:IPR017426
InterPro:IPR014935 Pfam:PF08832 PIRSF:PIRSF038181 GO:GO:0045925
IPI:IPI00208033 Ensembl:ENSRNOT00000005782 ArrayExpress:D4ADD6
Uniprot:D4ADD6
Length = 1443
Score = 427 (155.4 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 113/269 (42%), Positives = 159/269 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKS-LVNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLIS-----STHLTAGLSR---------AGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI T R + ++ Q+D D S CL+C+ARR+P
Sbjct: 198 RMLIHPPDEPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLP-R 252
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ +E F K D +G II +DTS +
Sbjct: 253 PPAITG-VESFMTKQDTTGKIISIDTSSL 280
Score = 160 (61.4 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q + +R EQE +
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQ-IQLMKRMEQEKS 88
Query: 66 YIEE 69
++
Sbjct: 89 TTDD 92
>MGI|MGI:1276523 [details] [associations]
symbol:Ncoa1 "nuclear receptor coactivator 1" species:10090
"Mus musculus" [GO:0000435 "positive regulation of transcription
from RNA polymerase II promoter by galactose" evidence=ISO;IMP]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0001012 "RNA
polymerase II regulatory region DNA binding" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=ISO;IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016746 "transferase activity, transferring acyl groups"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030331 "estrogen receptor binding" evidence=ISO] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=ISO] [GO:0032355 "response to estradiol
stimulus" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032526 "response to retinoic acid" evidence=ISO]
[GO:0032570 "response to progesterone stimulus" evidence=ISO]
[GO:0032870 "cellular response to hormone stimulus" evidence=ISO]
[GO:0033142 "progesterone receptor binding" evidence=ISO]
[GO:0035257 "nuclear hormone receptor binding" evidence=ISO]
[GO:0042974 "retinoic acid receptor binding" evidence=ISO]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=IMP] [GO:0043967 "histone
H4 acetylation" evidence=IMP] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045925 "positive regulation of female receptivity"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI;IDA] [GO:0046965
"retinoid X receptor binding" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0060179 "male mating
behavior" evidence=ISO] [GO:2001038 "regulation of cellular
response to drug" evidence=IMP] [GO:2001141 "regulation of RNA
biosynthetic process" evidence=IMP] InterPro:IPR000014
InterPro:IPR008955 InterPro:IPR009110 InterPro:IPR010011
InterPro:IPR011598 InterPro:IPR013767 InterPro:IPR014920
Pfam:PF00989 Pfam:PF07469 Pfam:PF08815 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 MGI:MGI:1276523
GO:GO:0005654 GO:GO:0032355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 GO:GO:0043065 Reactome:REACT_127416 GO:GO:0000790
GO:GO:0003713 GO:GO:0004871 GO:GO:0032526 GO:GO:0043967
GO:GO:0021549 GO:GO:0032870 GO:GO:0045666 GO:GO:0032570
GO:GO:0060206 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0030374
GO:GO:0004402 SUPFAM:SSF69125 Reactome:REACT_27166 PDB:4DMA
PDBsum:4DMA GO:GO:0000435 GO:GO:2001038 CTD:8648 eggNOG:NOG315556
HOVERGEN:HBG052583 KO:K09101 OMA:QITPQPP OrthoDB:EOG40K7Z6
ChiTaRS:NCOA1 Gene3D:4.10.630.10 InterPro:IPR017426
InterPro:IPR014935 Pfam:PF08832 PIRSF:PIRSF038181 EMBL:U56920
EMBL:U64606 EMBL:U64828 EMBL:AK035922 EMBL:BC068177 EMBL:BC080866
IPI:IPI00117839 IPI:IPI00471393 IPI:IPI00471395 IPI:IPI00857158
RefSeq:NP_035011.1 UniGene:Mm.301039 PDB:1OJ5 PDB:2O9I PDBsum:1OJ5
PDBsum:2O9I ProteinModelPortal:P70365 SMR:P70365 STRING:P70365
PhosphoSite:P70365 PaxDb:P70365 PRIDE:P70365
Ensembl:ENSMUST00000085814 GeneID:17977 KEGG:mmu:17977
UCSC:uc007mxr.2 UCSC:uc007mxs.2 UCSC:uc007mxu.1
GeneTree:ENSGT00530000063109 HOGENOM:HOG000230947 InParanoid:P70365
EvolutionaryTrace:P70365 NextBio:292937 Bgee:P70365
CleanEx:MM_NCOA1 Genevestigator:P70365
GermOnline:ENSMUSG00000020647 Uniprot:P70365
Length = 1447
Score = 427 (155.4 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 113/269 (42%), Positives = 159/269 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNI 229
E++ SVY+++H GDHA F L+P S VN W + A +R S TFN
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKS-LVNGVPWPQE----ATRRNS-------HTFNC 197
Query: 230 RLLIS-----STHLTAGLSR---------AGGENGQDDSGDVSSEGGPCLMCVARRIPPT 275
R+LI T R + ++ Q+D D S CL+C+ARR+P
Sbjct: 198 RMLIHPPEDPGTENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLP-R 252
Query: 276 DKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
++ +E F K D +G II +DTS +
Sbjct: 253 PPAITG-VESFMTKQDTTGKIISIDTSSL 280
Score = 160 (61.4 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q + +R EQE +
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQ-IQLMKRMEQEKS 88
Query: 66 YIEE 69
++
Sbjct: 89 TTDD 92
>UNIPROTKB|Q9W705 [details] [associations]
symbol:ncoa2 "Nuclear receptor coactivator 2" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS;IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0030375 "thyroid
hormone receptor coactivator activity" evidence=ISS] [GO:0035556
"intracellular signal transduction" evidence=IMP] [GO:0046966
"thyroid hormone receptor binding" evidence=ISS] InterPro:IPR000014
InterPro:IPR008955 InterPro:IPR009110 InterPro:IPR010011
InterPro:IPR011598 InterPro:IPR013767 InterPro:IPR014920
Pfam:PF00989 Pfam:PF07469 Pfam:PF08815 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 GO:GO:0035556 GO:GO:0016573 GO:GO:0006351
GO:GO:0009790 GO:GO:0004871 GO:GO:0030375 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0046966 GO:GO:0004402 SUPFAM:SSF69125
HOVERGEN:HBG052583 Gene3D:4.10.630.10 InterPro:IPR017426
InterPro:IPR014935 Pfam:PF08832 PIRSF:PIRSF038181 CTD:10499
KO:K11255 EMBL:AJ243119 RefSeq:NP_001081139.1 UniGene:Xl.4857
ProteinModelPortal:Q9W705 SMR:Q9W705 GeneID:394405 KEGG:xla:394405
Xenbase:XB-GENE-864856 Uniprot:Q9W705
Length = 1516
Score = 426 (155.0 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 108/266 (40%), Positives = 152/266 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
EKR REQEN YIEELAELI A +F + + +L KPDKCAIL+ETV QIR IK+ E ++
Sbjct: 32 EKRNREQENKYIEELAELIFA-NFND-IDNLNFKPDKCAILKETVKQIRQIKEHEKTAAA 89
Query: 114 --DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
D VQ+ +VSS+ +VI + LGP++LEAL+GF FVVN +G V F +EN+ ++RY+++
Sbjct: 90 NEDEVQKADVSSTGQSVIDKDALGPMMLEALDGFFFVVNREGNVVFVSENVTQYLRYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRL 231
E++ SVY+++H GDH+ F L+P S VN +R S TFN R+
Sbjct: 150 ELMNTSVYSILHVGDHSEFIKNLLPKS-LVNG--------VPRRNS-------HTFNCRM 193
Query: 232 LISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIPPTDKQ 278
L+ G E Q + EG CL+CVARR+P ++
Sbjct: 194 LVKPMMECEEERHDGQETHQKYESMQCFAVSQPKSIKEEGEDFQSCLICVARRVPVKERP 253
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTSGV 304
+ P E FT + D G I +DT+ +
Sbjct: 254 VPPPSESFTTRQDFQGKITSLDTTSM 279
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + +L KPDKCAIL+ETV Q + + + E+
Sbjct: 32 EKRNREQENKYIEELAELIFA-NFND-IDNLNFKPDKCAILKETVKQ-IRQIKEHEKTAA 88
Query: 66 YIEELAELISAASFAESM 83
E+ + +S +S+
Sbjct: 89 ANEDEVQKADVSSTGQSV 106
>UNIPROTKB|G3N0C2 [details] [associations]
symbol:NCOA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001038 "regulation of cellular response to drug"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0043967 "histone H4 acetylation"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0035257 "nuclear hormone receptor
binding" evidence=IEA] [GO:0030374 "ligand-dependent nuclear
receptor transcription coactivator activity" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000435 "positive regulation of transcription
from RNA polymerase II promoter by galactose" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00010 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0016573
GO:GO:0006351 GO:GO:0003713 GO:GO:0004871 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0004402 SUPFAM:SSF69125 Gene3D:4.10.630.10
InterPro:IPR014935 Pfam:PF08832 GeneTree:ENSGT00530000063109
EMBL:DAAA02031667 Ensembl:ENSBTAT00000064008 Uniprot:G3N0C2
Length = 1363
Score = 425 (154.7 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 106/263 (40%), Positives = 157/263 (59%)
Query: 53 CLN--EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE 110
C N EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E
Sbjct: 36 CCNSTEKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRME 93
Query: 111 ----TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
T+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++
Sbjct: 94 QEKSTTDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYL 153
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPS--LTAST 222
Y+++E++ SVY+++H GDHA F L+P S VN W ++ Q + +
Sbjct: 154 GYNQEELMNTSVYSILHVGDHAEFVKNLLPKS-LVNGVPWPQEATRQNSHTFNCRMLIHR 212
Query: 223 PNRTF-NIRLLISSTHLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSA 281
P+ + + + + ++ Q+D D S CL+C+ARR+P ++
Sbjct: 213 PDEPGPENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLP-RPPAITG 267
Query: 282 PIEQFTMKLDRSGTIIGMDTSGV 304
+E F K D +G II +DTS +
Sbjct: 268 -VESFMTKQDTTGKIISIDTSSL 289
Score = 164 (62.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 39/79 (49%), Positives = 55/79 (69%)
Query: 3 CLN--EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRR 60
C N EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q KR
Sbjct: 36 CCNSTEKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRME 93
Query: 61 EQENNYIEELAEL-ISAAS 78
++++ +E+ + IS++S
Sbjct: 94 QEKSTTDDEVQKSDISSSS 112
>UNIPROTKB|E1BK04 [details] [associations]
symbol:NCOA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0035257 "nuclear
hormone receptor binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00010 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0016573
GO:GO:0006351 GO:GO:0003713 GO:GO:0004871 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0004402 SUPFAM:SSF69125 Gene3D:4.10.630.10
InterPro:IPR014935 Pfam:PF08832 GeneTree:ENSGT00530000063109
EMBL:DAAA02031667 IPI:IPI00717382 Ensembl:ENSBTAT00000019983
Uniprot:E1BK04
Length = 1235
Score = 422 (153.6 bits), Expect = 2.8e-38, P = 2.8e-38
Identities = 104/258 (40%), Positives = 155/258 (60%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDEVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPS--LTASTPNRTF 227
E++ SVY+++H GDHA F L+P S VN W ++ Q + + P+
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKS-LVNGVPWPQEATRQNSHTFNCRMLIHRPDEPG 208
Query: 228 -NIRLLISSTHLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQF 286
+ + + + ++ Q+D D S CL+C+ARR+P ++ +E F
Sbjct: 209 PENQEACQRYEVMQCFTVSQPKSIQEDGEDFQS----CLICIARRLP-RPPAITG-VESF 262
Query: 287 TMKLDRSGTIIGMDTSGV 304
K D +G II +DTS +
Sbjct: 263 MTKQDTTGKIISIDTSSL 280
Score = 161 (61.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q KR ++++
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 66 YIEELAEL-ISAAS 78
+E+ + IS++S
Sbjct: 90 TDDEVQKSDISSSS 103
>UNIPROTKB|C9JCR8 [details] [associations]
symbol:NCOA3 "Nuclear receptor coactivator 3" species:9606
"Homo sapiens" [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0016573 GO:GO:0006351 GO:GO:0003713 GO:GO:0004871
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0004402 SUPFAM:SSF69125
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 HOGENOM:HOG000230947 EMBL:AL034418
IPI:IPI00220080 HGNC:HGNC:7670 ChiTaRS:NCOA3 EMBL:AL021394
EMBL:AL353777 ProteinModelPortal:C9JCR8 SMR:C9JCR8 STRING:C9JCR8
PRIDE:C9JCR8 Ensembl:ENST00000341724 ArrayExpress:C9JCR8
Bgee:C9JCR8 Uniprot:C9JCR8
Length = 1350
Score = 419 (152.6 bits), Expect = 6.9e-38, P = 6.9e-38
Identities = 113/297 (38%), Positives = 165/297 (55%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQ-ETSS--DAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q +T S D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH-----LTAGLS-RAGGENGQ--- 251
+WT+++ Q + TFN R+L+ + H + A R E Q
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 252 -DDSGDVSSEGGP---CLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+ EG C++CVARRI ++ + E F + D SG ++ +DT+ +
Sbjct: 229 LSQPRAMMEEGEDLQSCMICVARRITTGERTFPSNPESFITRHDLSGKVVNIDTNSL 285
Score = 154 (59.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 35/63 (55%), Positives = 42/63 (66%)
Query: 3 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQ 62
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV Q K + +
Sbjct: 31 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 88
Query: 63 ENN 65
+N
Sbjct: 89 ISN 91
Score = 38 (18.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 97 QETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLL 138
Q+ Q + +QQ+ QQ + S P V + + LL
Sbjct: 1181 QQQQQQQQQQQQQQQQQQQQQQTQAFSPPPNVTASPSMDGLL 1222
>UNIPROTKB|Q9Y6Q9 [details] [associations]
symbol:NCOA3 "Nuclear receptor coactivator 3" species:9606
"Homo sapiens" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0048589 "developmental growth" evidence=IEA] [GO:0060068
"vagina development" evidence=IEA] [GO:0060744 "mammary gland
branching involved in thelarche" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP;IDA] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IMP;NAS;IDA] [GO:0035257 "nuclear hormone
receptor binding" evidence=IDA] [GO:0046966 "thyroid hormone
receptor binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0050681 "androgen receptor
binding" evidence=NAS] [GO:0047485 "protein N-terminus binding"
evidence=IPI] [GO:0030521 "androgen receptor signaling pathway"
evidence=NAS] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IPI] [GO:0035624 "receptor transactivation"
evidence=TAS] [GO:0045618 "positive regulation of keratinocyte
differentiation" evidence=IMP] [GO:0010628 "positive regulation of
gene expression" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2001141
"regulation of RNA biosynthetic process" evidence=IMP] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016573 "histone acetylation" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 GO:GO:0005794 GO:GO:0005737 EMBL:CH471077
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0030521 GO:GO:0051091
GO:GO:0044281 Pathway_Interaction_DB:hnf3apathway GO:GO:0045944
GO:GO:0044255 GO:GO:0006351 GO:GO:0003682 GO:GO:0003713
GO:GO:0004871 GO:GO:0035264 GO:GO:0048589 Gene3D:4.10.280.10
SUPFAM:SSF47459 Pathway_Interaction_DB:retinoic_acid_pathway
PDB:3L3X PDB:3L3Z PDBsum:3L3X PDBsum:3L3Z GO:GO:0033148
GO:GO:0050681 GO:GO:0046966 GO:GO:0060744 GO:GO:0030374
GO:GO:0060068 GO:GO:0004402 SUPFAM:SSF69125 PDB:1KBH PDBsum:1KBH
GO:GO:0045618 GO:GO:0035624 eggNOG:NOG315556 HOVERGEN:HBG052583
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 EMBL:AF016031 EMBL:AF036892
EMBL:AF012108 EMBL:AF010227 EMBL:EF488684 EMBL:AL034418
EMBL:BC119001 IPI:IPI00220079 IPI:IPI00220080 IPI:IPI00220081
IPI:IPI00220082 IPI:IPI00748532 PIR:T03851 RefSeq:NP_001167559.1
RefSeq:NP_006525.2 RefSeq:NP_858045.1 UniGene:Hs.592142
DisProt:DP00343 ProteinModelPortal:Q9Y6Q9 SMR:Q9Y6Q9 DIP:DIP-30876N
IntAct:Q9Y6Q9 MINT:MINT-231818 STRING:Q9Y6Q9 PhosphoSite:Q9Y6Q9
DMDM:23396777 PaxDb:Q9Y6Q9 PRIDE:Q9Y6Q9 Ensembl:ENST00000340189
Ensembl:ENST00000371997 Ensembl:ENST00000371998
Ensembl:ENST00000372004 GeneID:8202 KEGG:hsa:8202 UCSC:uc002xtk.3
UCSC:uc002xtl.3 UCSC:uc010ght.2 CTD:8202 GeneCards:GC20P046130
HGNC:HGNC:7670 HPA:CAB009800 HPA:HPA024210 MIM:601937
neXtProt:NX_Q9Y6Q9 PharmGKB:PA31472 InParanoid:Q9Y6Q9 KO:K11256
OMA:DGNIVFV PhylomeDB:Q9Y6Q9 BindingDB:Q9Y6Q9 ChEMBL:CHEMBL1615382
ChiTaRS:NCOA3 EvolutionaryTrace:Q9Y6Q9 GenomeRNAi:8202
NextBio:30907 ArrayExpress:Q9Y6Q9 Bgee:Q9Y6Q9 CleanEx:HS_NCOA3
CleanEx:HS_RAC3 CleanEx:HS_TRAM1 Genevestigator:Q9Y6Q9
GermOnline:ENSG00000124151 Uniprot:Q9Y6Q9
Length = 1424
Score = 419 (152.6 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 113/297 (38%), Positives = 165/297 (55%)
Query: 27 ASFAESMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESM 83
+ E++ LA K + +T Q C EKRRREQE+ YIEELAELISA +
Sbjct: 2 SGLGENLDPLASDSRKRKLPCDTPGQGLTCSGEKRRREQESKYIEELAELISAN--LSDI 59
Query: 84 SSLAVKPDKCAILQETVNQIRNIKQQ-ETSS--DAVQQGEVSSSKPTVITNEVLGPLLLE 140
+ VKPDKCAIL+ETV QIR IK+Q +T S D VQ+ +VSS+ VI + LGPLLL+
Sbjct: 60 DNFNVKPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQ 119
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQ 200
AL+GFLFVVN DG + F +EN+ +++Y +++++ SVYN++H D F L S+
Sbjct: 120 ALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYNILHEEDRKDFLKNLPKSTVN 179
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTH-----LTAGLS-RAGGENGQ--- 251
+WT+++ Q + TFN R+L+ + H + A R E Q
Sbjct: 180 GVSWTNETQRQK-----------SHTFNCRMLMKTPHDILEDINASPEMRQRYETMQCFA 228
Query: 252 -DDSGDVSSEGGP---CLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+ EG C++CVARRI ++ + E F + D SG ++ +DT+ +
Sbjct: 229 LSQPRAMMEEGEDLQSCMICVARRITTGERTFPSNPESFITRHDLSGKVVNIDTNSL 285
Score = 154 (59.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 35/63 (55%), Positives = 42/63 (66%)
Query: 3 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQ 62
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV Q K + +
Sbjct: 31 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 88
Query: 63 ENN 65
+N
Sbjct: 89 ISN 91
Score = 38 (18.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 97 QETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLL 138
Q+ Q + +QQ+ QQ + S P V + + LL
Sbjct: 1255 QQQQQQQQQQQQQQQQQQQQQQTQAFSPPPNVTASPSMDGLL 1296
>UNIPROTKB|F1NMB5 [details] [associations]
symbol:NCOA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IEA] [GO:0035257 "nuclear hormone receptor
binding" evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0045618 "positive regulation of keratinocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060068 "vagina
development" evidence=IEA] [GO:0060744 "mammary gland branching
involved in thelarche" evidence=IEA] InterPro:IPR000014
InterPro:IPR008955 InterPro:IPR009110 InterPro:IPR010011
InterPro:IPR011598 InterPro:IPR013767 InterPro:IPR014920
Pfam:PF00989 Pfam:PF07469 Pfam:PF08815 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005634
GO:GO:0005737 GO:GO:0045944 GO:GO:0006351 GO:GO:0003682
GO:GO:0003713 GO:GO:0004871 GO:GO:0048589 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0004402 SUPFAM:SSF69125 GO:GO:0045618
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109
OMA:DGNIVFV EMBL:AADN02019299 EMBL:AADN02019300 IPI:IPI00602192
Ensembl:ENSGALT00000007275 Uniprot:F1NMB5
Length = 1408
Score = 417 (151.9 bits), Expect = 1.2e-37, P = 1.2e-37
Identities = 108/267 (40%), Positives = 152/267 (56%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 37 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 94
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
++ D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN DG + F +EN+ +++Y
Sbjct: 95 VSNDDEVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNRDGNIVFVSENVTQYLQYK 154
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVY ++H D F L SS AWT+D+ Q K + +T +
Sbjct: 155 QEDLVNTSVYGILHEEDRKDFLKNLPKSSVNGVAWTNDAPRQ--KSHTFNCRMMVKTSHD 212
Query: 230 RLLISSTHLTA----------GLS--RAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDK 277
L +H LS RA E G+D D+ S C++CVARRI ++
Sbjct: 213 LLEDVGSHQDTRQRYETMQCFALSQPRAMMEEGEDT--DLQS----CMICVARRIATAER 266
Query: 278 QLSAPIEQFTMKLDRSGTIIGMDTSGV 304
E F + D SG ++ +DT+ +
Sbjct: 267 VFPTNPESFITRHDLSGKLVNIDTNSL 293
Score = 155 (59.6 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 35/63 (55%), Positives = 42/63 (66%)
Query: 3 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQ 62
C EKRRREQE+ YIEELAELISA + + VKPDKCAIL+ETV Q K + +
Sbjct: 37 CSGEKRRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 94
Query: 63 ENN 65
+N
Sbjct: 95 VSN 97
Score = 41 (19.5 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 8/38 (21%), Positives = 19/38 (50%)
Query: 155 VNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHN 192
VN T +++S +R ++ + + + + H D + N
Sbjct: 286 VNIDTNSLRSSMRPGFEDTIRRCIQRFLCHNDGQSWSN 323
>ZFIN|ZDB-GENE-041001-175 [details] [associations]
symbol:ncoa1 "nuclear receptor coactivator 1"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR008955 InterPro:IPR009110 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
ZFIN:ZDB-GENE-041001-175 GO:GO:0005634 GO:GO:0006355 GO:GO:0016573
GO:GO:0006351 GO:GO:0003713 GO:GO:0004871 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 GO:GO:0004402 SUPFAM:SSF69125 Gene3D:4.10.630.10
InterPro:IPR014935 Pfam:PF08832 GeneTree:ENSGT00530000063109
EMBL:BX248390 EMBL:BX255939 IPI:IPI00834533
Ensembl:ENSDART00000045948 Bgee:F1Q717 Uniprot:F1Q717
Length = 1367
Score = 409 (149.0 bits), Expect = 8.2e-37, P = 8.2e-37
Identities = 104/269 (38%), Positives = 153/269 (56%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----- 110
EKRRRE E YI+ELAEL+SA ++SL VKPDKC IL+ TV+QI+ IK++E
Sbjct: 32 EKRRRELECRYIDELAELLSANM--SDIASLNVKPDKCHILKSTVDQIQQIKRREQENAA 89
Query: 111 --TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
+ +D VQQ ++SSS ++ E LGPLLLEAL+GF FVVN +G + F +EN+ ++ Y
Sbjct: 90 LMSPNDEVQQSDISSSSHGMVEKEALGPLLLEALDGFFFVVNREGRIVFVSENVTGYLGY 149
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAG--------KRPSL 218
+++E++ SVY+++H GDH F L+P S VN W+ + G + KRP
Sbjct: 150 TQEELMTSSVYSILHVGDHNEFVRILLPKSLVVNGVPWSQEQGRRNSHTFNCRLLKRPPD 209
Query: 219 TASTPNRTFNIRLLISSTHLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQ 278
+ N+ + + T +A E G+D + S CL+C+A +IP Q
Sbjct: 210 EVDSENQEARQQYELMQC-FTVSQPKALQEEGED----LQS----CLICIACQIP-RPPQ 259
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTSGVSQT 307
+ E F K D +G II ++TS + T
Sbjct: 260 IPVSTESFITKQDPTGKIISIETSALRAT 288
Score = 155 (59.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 39/96 (40%), Positives = 57/96 (59%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRRE E YI+ELAEL+SA ++SL VKPDKC IL+ TV+Q + + +RREQEN
Sbjct: 32 EKRRRELECRYIDELAELLSANM--SDIASLNVKPDKCHILKSTVDQ-IQQIKRREQENA 88
Query: 66 YIEELAELISAASFAESMSSLAVKPDKCAILQETVN 101
+ + + + + S + K +L E ++
Sbjct: 89 ALMSPNDEVQQSDISSSSHGMVEKEALGPLLLEALD 124
>UNIPROTKB|O57539 [details] [associations]
symbol:ncoa3 "Nuclear receptor coactivator 3" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0016573
GO:GO:0006351 GO:GO:0003713 GO:GO:0004871 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0004402 SUPFAM:SSF69125 HOVERGEN:HBG052583
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 CTD:8202 KO:K11256 EMBL:AF044080
RefSeq:NP_001081732.1 UniGene:Xl.268 ProteinModelPortal:O57539
SMR:O57539 GeneID:398021 KEGG:xla:398021 Xenbase:XB-GENE-865628
Uniprot:O57539
Length = 1391
Score = 407 (148.3 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 106/281 (37%), Positives = 157/281 (55%)
Query: 39 KPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQE 98
KP C + C EKRRREQE+ YIEELA+LISA + + VKPDKCAIL+E
Sbjct: 20 KPSSCDTPGPGLT-CSGEKRRREQESKYIEELADLISAN--LSDIDNFNVKPDKCAILKE 76
Query: 99 TVNQIRNIKQQETSS---DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYV 155
TV QIR IK+Q +S D VQ+ +VSS+ VI + LGPLLL+AL+GFL+VVN +G +
Sbjct: 77 TVRQIRQIKEQGKASSNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLYVVNREGSI 136
Query: 156 NFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKR 215
F +EN+ +++Y +++++ SVY+++H D F L S+ W S++ Q
Sbjct: 137 VFVSENVTQYLQYKQEDLVNTSVYSILHEEDRKDFLKNLPKSTVNGVPWFSETPRQK--- 193
Query: 216 PSLTASTPNRTFNIRLLISSTH--LTAGLS---RAGGENGQ----DDSGDVSSEGGP--- 263
+ TFN R+L+ ++H L G + R E Q + EG
Sbjct: 194 --------SHTFNCRMLVKTSHDHLEDGSNLDARQRYETMQCFALSQPRAMIEEGEDLQS 245
Query: 264 CLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
C++CVARRI ++ SA E F + D +G ++ +D + +
Sbjct: 246 CMICVARRITTAERAFSANPESFITRHDLTGKVVNIDANSL 286
Score = 154 (59.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 34/63 (53%), Positives = 42/63 (66%)
Query: 3 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQ 62
C EKRRREQE+ YIEELA+LISA + + VKPDKCAIL+ETV Q K + +
Sbjct: 33 CSGEKRRREQESKYIEELADLISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 90
Query: 63 ENN 65
+N
Sbjct: 91 SSN 93
>UNIPROTKB|E2R220 [details] [associations]
symbol:NCOA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060744 "mammary gland branching involved in
thelarche" evidence=IEA] [GO:0060068 "vagina development"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045618 "positive regulation of
keratinocyte differentiation" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0035257 "nuclear
hormone receptor binding" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005634 GO:GO:0005737 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0003713 GO:GO:0004871 GO:GO:0035264
GO:GO:0048589 SUPFAM:SSF47459 GO:GO:0060744 GO:GO:0060068
GO:GO:0004402 SUPFAM:SSF69125 GO:GO:0045618 Gene3D:4.10.630.10
InterPro:IPR017426 InterPro:IPR014935 Pfam:PF08832
PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109 CTD:8202 KO:K11256
OMA:DGNIVFV EMBL:AAEX03013985 RefSeq:XP_543039.2
Ensembl:ENSCAFT00000017243 GeneID:485915 KEGG:cfa:485915
NextBio:20859807 Uniprot:E2R220
Length = 1416
Score = 407 (148.3 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 112/292 (38%), Positives = 162/292 (55%)
Query: 32 SMSSLAVKPDKCAILQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESMSSLAV 88
S+ LA K + +T Q C EK RREQE+ YIEELAELISA + + V
Sbjct: 8 SLDPLAPDSRKRKLPCDTPGQGLTCSGEKWRREQESKYIEELAELISAN--LSDIDNFNV 65
Query: 89 KPDKCAILQETVNQIRNIKQQ-ETSS--DAVQQGEVSSSKPTVITNEVLGPLLLEALEGF 145
KPDKCAIL+ETV QIR IK+Q +T S D VQ+ +VSS+ VI + LGPLLL+AL+GF
Sbjct: 66 KPDKCAILKETVRQIRQIKEQGKTISNDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGF 125
Query: 146 LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWT 205
LFVVN DG + F +EN+ +++Y +++++ SVY+++H D F L S+ AWT
Sbjct: 126 LFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYSILHEEDRKDFLKNLPKSTVNGVAWT 185
Query: 206 SDSGGQAGKRPSLTASTPNRTFNIRLLISSTH------LTAGLSRAGGENGQ----DDSG 255
+++ Q + TFN R+L+ + H T+ R E Q
Sbjct: 186 NETQRQK-----------SHTFNCRMLMKTPHDILEDINTSPEMRQRYETMQCFALSQPR 234
Query: 256 DVSSEGGP---CLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+ EG C++CVARRI ++ + E F + D SG ++ +DT+ +
Sbjct: 235 AMMEEGEDLQSCMICVARRITTGERAFPSNPESFITRHDLSGKVVNIDTNSL 286
Score = 146 (56.5 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 3 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQ 62
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV Q K + +
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKT 89
Query: 63 ENN 65
+N
Sbjct: 90 ISN 92
Score = 41 (19.5 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 96 LQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLF-VVNPDGY 154
LQ V + N Q +SS + SK TNE G L+ L+ L + + D Y
Sbjct: 755 LQPKVEGVDNKMSQCSSSTIPSSSQEKDSKIKTETNEE-GSGDLDNLDAILGDLTSSDFY 813
Query: 155 VNFCTEN 161
N + N
Sbjct: 814 NNSISTN 820
>UNIPROTKB|F1MVD0 [details] [associations]
symbol:NCOA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060744 "mammary gland branching involved in thelarche"
evidence=IEA] [GO:0060068 "vagina development" evidence=IEA]
[GO:0048589 "developmental growth" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045618 "positive regulation of keratinocyte
differentiation" evidence=IEA] [GO:0035264 "multicellular organism
growth" evidence=IEA] [GO:0035257 "nuclear hormone receptor
binding" evidence=IEA] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 GO:GO:0005634 GO:GO:0005737 GO:GO:0045944
GO:GO:0006351 GO:GO:0003682 GO:GO:0003713 GO:GO:0004871
GO:GO:0035264 GO:GO:0048589 SUPFAM:SSF47459 GO:GO:0060744
GO:GO:0060068 GO:GO:0004402 SUPFAM:SSF69125 GO:GO:0045618
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109
OMA:DGNIVFV EMBL:DAAA02036810 IPI:IPI00709974
Ensembl:ENSBTAT00000009850 Uniprot:F1MVD0
Length = 1408
Score = 406 (148.0 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 106/268 (39%), Positives = 150/268 (55%)
Query: 53 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE-- 110
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV QIR IK+Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQIRQIKEQGKA 89
Query: 111 -TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
TS D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVVN +G + F +EN+ +++Y
Sbjct: 90 ITSDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGFLFVVNREGNIVFVSENVTQYLQYK 149
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
+++++ SVYN++H D F L S+ WT+++ Q + TFN
Sbjct: 150 QEDLVNTSVYNILHEEDRKDFLKNLPKSTVNGVTWTNETQRQK-----------SHTFNC 198
Query: 230 RLLISSTH------LTAGLSRAGGENGQ----DDSGDVSSEGGP---CLMCVARRIPPTD 276
R+L+ H T+ R E Q + EG C++CVARRI +
Sbjct: 199 RMLMKIPHDILEDINTSPEMRQRYETMQCFALSQPRAMMEEGEDLQSCMICVARRITTGE 258
Query: 277 KQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+ + E F + D SG +I +DT+ +
Sbjct: 259 RAFPSSPESFITRHDLSGKVITIDTNSL 286
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 32/50 (64%), Positives = 36/50 (72%)
Query: 3 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 52
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV Q
Sbjct: 32 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQ 79
>ZFIN|ZDB-GENE-051107-8 [details] [associations]
symbol:ncoa3 "nuclear receptor coactivator 3"
species:7955 "Danio rerio" [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF08815 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 ZFIN:ZDB-GENE-051107-8
GO:GO:0005634 GO:GO:0006355 GO:GO:0016573 GO:GO:0006351
GO:GO:0003713 GO:GO:0004871 GO:GO:0004402 SUPFAM:SSF69125
Gene3D:4.10.630.10 InterPro:IPR014935 Pfam:PF08832
GeneTree:ENSGT00530000063109 CTD:8202 KO:K11256 EMBL:BX296530
EMBL:CU207354 EMBL:CU929093 IPI:IPI00934033 RefSeq:XP_692938.5
UniGene:Dr.151262 UniGene:Dr.157663 Ensembl:ENSDART00000110621
GeneID:564519 KEGG:dre:564519 NextBio:20885420 Bgee:F1QMV7
Uniprot:F1QMV7
Length = 1497
Score = 401 (146.2 bits), Expect = 6.8e-36, P = 6.8e-36
Identities = 106/268 (39%), Positives = 154/268 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS-- 113
+KRRREQE+ YIEELAELISA + S VKPDKCAIL+ETV QIR IK+Q SS
Sbjct: 31 DKRRREQESKYIEELAELISAN--LSDIDSFNVKPDKCAILKETVRQIRQIKEQGKSSCG 88
Query: 114 -DAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D VQ+ +VSS+ VI + LGPLLL+AL+GFLFVV+ +G + F ++N+ +++Y ++E
Sbjct: 89 DDDVQKADVSSTGQGVIDKDHLGPLLLQALDGFLFVVSREGSIVFVSDNVTQYLQYKQEE 148
Query: 173 VLGKSVYNLIHHGDHARFHNCLVPSSHQVNA--WTSDSGGQAGKRPSLTASTPNRTFNIR 230
++ S+YN++H D H L P S+ N+ W GG + ++ S TFN R
Sbjct: 149 LINTSIYNILHEEDREELHKNL-PKSNGPNSVSW----GGDSSRQKS-------HTFNCR 196
Query: 231 LLISSTHL-TAGLSRAGG---ENGQ----DDSGDVSSEGGP---CLMCVARRIPPTDKQL 279
+L+ H G AGG E Q + EG C++CVARR+ ++
Sbjct: 197 MLVKFGHGGPGGEEGAGGPRYETMQCFALTQPKAMMEEGEDLQSCMICVARRVTAVERT- 255
Query: 280 SAPIEQFTMKLDRSGTIIGMDTSGVSQT 307
E+F+ + + SG +I ++ + T
Sbjct: 256 ----ERFSTRHELSGKLIEIEQQSLLHT 279
Score = 145 (56.1 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 32/47 (68%), Positives = 36/47 (76%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 52
+KRRREQE+ YIEELAELISA + S VKPDKCAIL+ETV Q
Sbjct: 31 DKRRREQESKYIEELAELISAN--LSDIDSFNVKPDKCAILKETVRQ 75
Score = 83 (34.3 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 39/155 (25%), Positives = 64/155 (41%)
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENI-KSFIRYSR 170
S+ + QQG + ++KP IT++ P + G D TEN K + ++
Sbjct: 593 STQSSQQGPIGNNKP--ITSDSKSPSSAHST-GL------DQQQASSTENTDKPDSQSNK 643
Query: 171 QEVLGKSVYNLIHHGD-HARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNI 229
G V + G H + L + ++ T+ SG G+ + S P T +
Sbjct: 644 DGSAGGEVNRRVPDGKGHKKLLQLLTSPTEEIGIGTATSGPVPGRASTPMGSDPKETGSG 703
Query: 230 RLLISSTHLTAGLSRAGGEN-GQDDSGDVSSEGGP 263
+ SST +++ + G N Q SG VSS P
Sbjct: 704 MMSPSSTGVSSSSGSSSGNNVNQQSSGGVSSTACP 738
>UNIPROTKB|F1LS17 [details] [associations]
symbol:Ncoa3 "Nuclear receptor coactivator 3" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0004402 "histone acetyltransferase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0045618 "positive regulation of keratinocyte
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0060068 "vagina
development" evidence=IEA] [GO:0060744 "mammary gland branching
involved in thelarche" evidence=IEA] InterPro:IPR000014
InterPro:IPR008955 InterPro:IPR009110 InterPro:IPR010011
InterPro:IPR011598 InterPro:IPR013767 InterPro:IPR014920
Pfam:PF00989 Pfam:PF07469 Pfam:PF08815 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 RGD:620109
GO:GO:0005634 GO:GO:0006355 GO:GO:0016573 GO:GO:0006351
GO:GO:0003713 GO:GO:0004871 SUPFAM:SSF47459 GO:GO:0004402
SUPFAM:SSF69125 Gene3D:4.10.630.10 InterPro:IPR017426
InterPro:IPR014935 Pfam:PF08832 PIRSF:PIRSF038181
GeneTree:ENSGT00530000063109 IPI:IPI00951376
Ensembl:ENSRNOT00000066122 ArrayExpress:F1LS17 Uniprot:F1LS17
Length = 1406
Score = 398 (145.2 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 113/294 (38%), Positives = 163/294 (55%)
Query: 32 SMSSLAVKPDKCAILQETVNQCL---NEKRRREQENNYIEELAELISAASFAESMSSLAV 88
S+ LA + K + + Q L EK RREQE+ YIEELAELISA + + V
Sbjct: 8 SLDPLATESRKRKLPCDAPGQGLVYSGEKWRREQESKYIEELAELISAN--LSDIDNFNV 65
Query: 89 KPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGF 145
KPDKCAIL+ETV QIR IK+Q +S D VQ+ +VSS+ VI + LGPLLL+AL+GF
Sbjct: 66 KPDKCAILKETVRQIRQIKEQGKTISSDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGF 125
Query: 146 LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--A 203
LFVVN DG + F +EN+ +++Y +++++ SVY+++H D F VP S VN +
Sbjct: 126 LFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYSILHEQDRKDFLKH-VPKS-TVNGVS 183
Query: 204 WTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTAGLSRAGGENGQ----------DD 253
WT+++ Q + TFN R+L+ TH + A E Q
Sbjct: 184 WTNENQRQK-----------SHTFNCRMLMK-THDILEDTNASPETRQRYETMQCFALSQ 231
Query: 254 SGDVSSEGGP---CLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+ EG C++CVARR+ TD+ + E F + D SG ++ +DT+ +
Sbjct: 232 PRAMLEEGEDLQCCMICVARRVT-TDRPFPSSPESFITRHDLSGKVVNIDTNSL 284
Score = 137 (53.3 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 52
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV Q
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQ 79
Score = 39 (18.8 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 242 LSRAGGENGQDDSGDVSSEGGPCLMCVARRIP---PTDKQLSAPIEQ 285
L RAGG+ GP L + R+P PT + P +Q
Sbjct: 929 LGRAGGDYSAALPRPALGSSGPTLPLRSNRLPGARPTLQPQPQPQQQ 975
>UNIPROTKB|F1M8E5 [details] [associations]
symbol:Ncoa3 "Nuclear receptor coactivator 3" species:10116
"Rattus norvegicus" [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
RGD:620109 GO:GO:0005634 GO:GO:0005737 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0003713 GO:GO:0004871 GO:GO:0035264
GO:GO:0048589 SUPFAM:SSF47459 GO:GO:0060744 GO:GO:0060068
GO:GO:0004402 SUPFAM:SSF69125 GO:GO:0045618 Gene3D:4.10.630.10
InterPro:IPR017426 InterPro:IPR014935 Pfam:PF08832
PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109 OMA:DGNIVFV
IPI:IPI00567270 Ensembl:ENSRNOT00000007768 ArrayExpress:F1M8E5
Uniprot:F1M8E5
Length = 1406
Score = 398 (145.2 bits), Expect = 1.3e-35, P = 1.3e-35
Identities = 113/294 (38%), Positives = 163/294 (55%)
Query: 32 SMSSLAVKPDKCAILQETVNQCL---NEKRRREQENNYIEELAELISAASFAESMSSLAV 88
S+ LA + K + + Q L EK RREQE+ YIEELAELISA + + V
Sbjct: 8 SLDPLATESRKRKLPCDAPGQGLVYSGEKWRREQESKYIEELAELISAN--LSDIDNFNV 65
Query: 89 KPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGF 145
KPDKCAIL+ETV QIR IK+Q +S D VQ+ +VSS+ VI + LGPLLL+AL+GF
Sbjct: 66 KPDKCAILKETVRQIRQIKEQGKTISSDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGF 125
Query: 146 LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVN--A 203
LFVVN DG + F +EN+ +++Y +++++ SVY+++H D F VP S VN +
Sbjct: 126 LFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYSILHEQDRKDFLKH-VPKS-TVNGVS 183
Query: 204 WTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTAGLSRAGGENGQ----------DD 253
WT+++ Q + TFN R+L+ TH + A E Q
Sbjct: 184 WTNENQRQK-----------SHTFNCRMLMK-THDILEDTNASPETRQRYETMQCFALSQ 231
Query: 254 SGDVSSEGGP---CLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
+ EG C++CVARR+ TD+ + E F + D SG ++ +DT+ +
Sbjct: 232 PRAMLEEGEDLQCCMICVARRVT-TDRPFPSSPESFITRHDLSGKVVNIDTNSL 284
Score = 137 (53.3 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 52
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV Q
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQ 79
Score = 39 (18.8 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 242 LSRAGGENGQDDSGDVSSEGGPCLMCVARRIP---PTDKQLSAPIEQ 285
L RAGG+ GP L + R+P PT + P +Q
Sbjct: 929 LGRAGGDYSAALPRPALGSSGPTLPLRSNRLPGARPTLQPQPQPQQQ 975
>UNIPROTKB|D4A1M5 [details] [associations]
symbol:Ncoa3 "Nuclear receptor coactivator 3" species:10116
"Rattus norvegicus" [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035257 "nuclear hormone receptor binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
RGD:620109 GO:GO:0005634 GO:GO:0006355 GO:GO:0016573 GO:GO:0006351
GO:GO:0003713 GO:GO:0004871 SUPFAM:SSF47459 GO:GO:0004402
SUPFAM:SSF69125 Gene3D:4.10.630.10 InterPro:IPR017426
InterPro:IPR014935 Pfam:PF08832 PIRSF:PIRSF038181
GeneTree:ENSGT00530000063109 IPI:IPI00373366
Ensembl:ENSRNOT00000044234 ArrayExpress:D4A1M5 Uniprot:D4A1M5
Length = 1396
Score = 343 (125.8 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 78/166 (46%), Positives = 109/166 (65%)
Query: 32 SMSSLAVKPDKCAILQETVNQCL---NEKRRREQENNYIEELAELISAASFAESMSSLAV 88
S+ LA + K + + Q L EK RREQE+ YIEELAELISA + + V
Sbjct: 8 SLDPLATESRKRKLPCDAPGQGLVYSGEKWRREQESKYIEELAELISAN--LSDIDNFNV 65
Query: 89 KPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGF 145
KPDKCAIL+ETV QIR IK+Q +S D VQ+ +VSS+ VI + LGPLLL+AL+GF
Sbjct: 66 KPDKCAILKETVRQIRQIKEQGKTISSDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGF 125
Query: 146 LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFH 191
LFVVN DG + F +EN+ +++Y +++++ SVY+++H D F+
Sbjct: 126 LFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYSILHEQDRKDFN 171
Score = 137 (53.3 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 52
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV Q
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQ 79
Score = 81 (33.6 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 264 CLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
C++CVARR+ TD+ + E F + D SG ++ +DT+ +
Sbjct: 243 CMICVARRVT-TDRPFPSSPESFITRHDLSGKVVNIDTNSL 282
Score = 39 (18.8 bits), Expect = 8.3e-31, Sum P(2) = 8.3e-31
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 242 LSRAGGENGQDDSGDVSSEGGPCLMCVARRIP---PTDKQLSAPIEQ 285
L RAGG+ GP L + R+P PT + P +Q
Sbjct: 927 LGRAGGDYSAALPRPALGSSGPTLPLRSNRLPGARPTLQPQPQPQQQ 973
>UNIPROTKB|D4AB68 [details] [associations]
symbol:Ncoa1 "Nuclear receptor coactivator 1 (Predicted),
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0000435
"positive regulation of transcription from RNA polymerase II
promoter by galactose" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IEA] [GO:0035257
"nuclear hormone receptor binding" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:2001038
"regulation of cellular response to drug" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR011598 InterPro:IPR013767
InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469 Pfam:PF08815
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
RGD:1309046 GO:GO:0005634 GO:GO:0006355 GO:GO:0016573 GO:GO:0006351
GO:GO:0003713 GO:GO:0004871 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0004402 SUPFAM:SSF69125 EMBL:CH473947 CTD:8648 KO:K09101
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 IPI:IPI00869828
RefSeq:NP_001101482.1 UniGene:Rn.165307 Ensembl:ENSRNOT00000005880
GeneID:313929 KEGG:rno:313929 NextBio:667009 Uniprot:D4AB68
Length = 1417
Score = 379 (138.5 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 78/147 (53%), Positives = 108/147 (73%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQE----T 111
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+QI+ +K+ E T
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQIQLMKRMEQEKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ D VQ+ ++SSS VI E LGPLLLEAL+GF FVVN +G + F +EN+ S++ Y+++
Sbjct: 90 TDDDVQKSDISSSSQGVIEKESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQE 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSS 198
E++ SVY+++H GDHA F L+P S
Sbjct: 150 ELMNTSVYSILHVGDHAEFVKNLLPKS 176
Score = 160 (61.4 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKRRREQEN Y+EELAEL+SA + SL+VKPDKC IL++TV+Q + +R EQE +
Sbjct: 32 EKRRREQENKYLEELAELLSAN--ISDIDSLSVKPDKCKILKKTVDQ-IQLMKRMEQEKS 88
Query: 66 YIEE 69
++
Sbjct: 89 TTDD 92
>MGI|MGI:1276535 [details] [associations]
symbol:Ncoa3 "nuclear receptor coactivator 3" species:10090
"Mus musculus" [GO:0001012 "RNA polymerase II regulatory region DNA
binding" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0004402
"histone acetyltransferase activity" evidence=ISO] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0010628 "positive regulation of
gene expression" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016746 "transferase activity, transferring acyl groups"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISO] [GO:0030307 "positive regulation of cell
growth" evidence=ISO] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0033145 "positive
regulation of intracellular steroid hormone receptor signaling
pathway" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0035257 "nuclear hormone receptor binding" evidence=ISO]
[GO:0035264 "multicellular organism growth" evidence=IMP]
[GO:0042975 "peroxisome proliferator activated receptor binding"
evidence=ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISO] [GO:0045618 "positive regulation of
keratinocyte differentiation" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0050681 "androgen receptor binding" evidence=ISO] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0060068 "vagina development"
evidence=IMP] [GO:0060744 "mammary gland branching involved in
thelarche" evidence=IMP] [GO:2001141 "regulation of RNA
biosynthetic process" evidence=ISO] InterPro:IPR000014
InterPro:IPR008955 InterPro:IPR009110 InterPro:IPR010011
InterPro:IPR011598 InterPro:IPR013767 InterPro:IPR014920
Pfam:PF00989 Pfam:PF07469 Pfam:PF08815 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 MGI:MGI:1276535
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0016573
GO:GO:0006351 GO:GO:0003682 Reactome:REACT_127416 GO:GO:0003713
GO:GO:0004871 GO:GO:0035264 GO:GO:0048589 SUPFAM:SSF47459
GO:GO:0060744 GO:GO:0060068 GO:GO:0004402 SUPFAM:SSF69125
Reactome:REACT_27166 eggNOG:NOG315556 HOVERGEN:HBG052583
Gene3D:4.10.630.10 InterPro:IPR017426 InterPro:IPR014935
Pfam:PF08832 PIRSF:PIRSF038181 HOGENOM:HOG000230947 ChiTaRS:NCOA3
EMBL:AF000581 EMBL:AK021229 IPI:IPI00761976 UniGene:Mm.469663
ProteinModelPortal:O09000 SMR:O09000 IntAct:O09000 STRING:O09000
PhosphoSite:O09000 PaxDb:O09000 PRIDE:O09000 CleanEx:MM_NCOA3
CleanEx:MM_RAC3 Genevestigator:O09000 GermOnline:ENSMUSG00000027678
Uniprot:O09000
Length = 1398
Score = 337 (123.7 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 78/167 (46%), Positives = 108/167 (64%)
Query: 32 SMSSLAVKPDKCAILQETVNQCL---NEKRRREQENNYIEELAELISAASFAESMSSLAV 88
S+ LA + K + + Q L EK RREQE+ YIEELAELISA + + V
Sbjct: 8 SLDPLAAESRKRKLPCDAPGQGLVYSGEKWRREQESKYIEELAELISAN--LSDIDNFNV 65
Query: 89 KPDKCAILQETVNQIRNIKQQE---TSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGF 145
KPDKCAIL+ETV QIR IK+Q +S D VQ+ +VSS+ VI + LGPLLL+AL+GF
Sbjct: 66 KPDKCAILKETVRQIRQIKEQGKTISSDDDVQKADVSSTGQGVIDKDSLGPLLLQALDGF 125
Query: 146 LFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHN 192
LFVVN DG + F +EN+ +++Y +++++ SVY+++H F N
Sbjct: 126 LFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYSILHEPRRKDFLN 172
Score = 137 (53.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 52
EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV Q
Sbjct: 35 EKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQ 79
Score = 71 (30.1 bits), Expect = 1.6e-33, Sum P(2) = 1.6e-33
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 264 CLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
C++CVARR+ T S+P E F + D SG ++ +DT+ +
Sbjct: 246 CMICVARRV--TAPFPSSP-ESFITRHDLSGKVVNIDTNSL 283
>UNIPROTKB|F1RU09 [details] [associations]
symbol:NCOA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035257 "nuclear hormone receptor binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR013767 InterPro:IPR014920
Pfam:PF00989 Pfam:PF07469 Pfam:PF08815 PROSITE:PS50112
SMART:SM00091 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0016573 GO:GO:0003713 GO:GO:0004871 SMART:SM00086
GO:GO:0004402 SUPFAM:SSF69125 Gene3D:4.10.630.10 InterPro:IPR017426
InterPro:IPR014935 Pfam:PF08832 PIRSF:PIRSF038181
GeneTree:ENSGT00530000063109 EMBL:CU468851
Ensembl:ENSSSCT00000006789 Uniprot:F1RU09
Length = 1308
Score = 282 (104.3 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 73/209 (34%), Positives = 109/209 (52%)
Query: 107 KQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
K + D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++
Sbjct: 2 KAAAANIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYL 61
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRT 226
RY+++E++ KSVY+++H GDH F L+P S VN G +G+ P ++ T
Sbjct: 62 RYNQEELMNKSVYSILHVGDHTEFVKNLLPKSI-VNG-----GSWSGEPPRRSS----HT 111
Query: 227 FNIRLLISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIP 273
FN R+L+ E Q + EG CL+CVARR+P
Sbjct: 112 FNCRMLVKPLPDPEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVP 171
Query: 274 PTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ + E FT + D G I +DTS
Sbjct: 172 MKERPVLPSSESFTTRQDLQGKITSLDTS 200
>UNIPROTKB|F1RU10 [details] [associations]
symbol:NCOA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035257 "nuclear hormone receptor binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR008955 InterPro:IPR009110
InterPro:IPR010011 InterPro:IPR013767 InterPro:IPR014920
Pfam:PF00989 Pfam:PF07469 Pfam:PF08815 PROSITE:PS50112
SMART:SM00091 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0016573 GO:GO:0003713 GO:GO:0004871 SMART:SM00086
GO:GO:0004402 SUPFAM:SSF69125 Gene3D:4.10.630.10 InterPro:IPR017426
InterPro:IPR014935 Pfam:PF08832 PIRSF:PIRSF038181
GeneTree:ENSGT00530000063109 OMA:TAPWPDS EMBL:CU468851
Ensembl:ENSSSCT00000006788 Uniprot:F1RU10
Length = 1377
Score = 282 (104.3 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 73/209 (34%), Positives = 109/209 (52%)
Query: 107 KQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
K + D VQ+ +VSS+ VI + LGP++LEAL+GF FVVN +G V F +EN+ ++
Sbjct: 2 KAAAANIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGNVVFVSENVTQYL 61
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRT 226
RY+++E++ KSVY+++H GDH F L+P S VN G +G+ P ++ T
Sbjct: 62 RYNQEELMNKSVYSILHVGDHTEFVKNLLPKSI-VNG-----GSWSGEPPRRSS----HT 111
Query: 227 FNIRLLISSTHLTAGLSRAGGENGQ----------DDSGDVSSEGGP---CLMCVARRIP 273
FN R+L+ E Q + EG CL+CVARR+P
Sbjct: 112 FNCRMLVKPLPDPEEEGHDNQEAHQKYETMQCFAVSQPKSIKEEGEDLQSCLICVARRVP 171
Query: 274 PTDKQLSAPIEQFTMKLDRSGTIIGMDTS 302
++ + E FT + D G I +DTS
Sbjct: 172 MKERPVLPSSESFTTRQDLQGKITSLDTS 200
>UNIPROTKB|F1SBF0 [details] [associations]
symbol:NCOA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060744 "mammary gland branching involved in thelarche"
evidence=IEA] [GO:0060068 "vagina development" evidence=IEA]
[GO:0048589 "developmental growth" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045618 "positive regulation of keratinocyte
differentiation" evidence=IEA] [GO:0035264 "multicellular organism
growth" evidence=IEA] [GO:0035257 "nuclear hormone receptor
binding" evidence=IEA] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR008955
InterPro:IPR009110 InterPro:IPR010011 InterPro:IPR011598
InterPro:IPR013767 InterPro:IPR014920 Pfam:PF00989 Pfam:PF07469
Pfam:PF08815 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 GO:GO:0005634 GO:GO:0005737 GO:GO:0045944
GO:GO:0006351 GO:GO:0003682 GO:GO:0003713 GO:GO:0004871
GO:GO:0035264 GO:GO:0048589 GO:GO:0060744 GO:GO:0060068
GO:GO:0004402 SUPFAM:SSF69125 GO:GO:0045618 Gene3D:4.10.630.10
InterPro:IPR017426 InterPro:IPR014935 Pfam:PF08832
PIRSF:PIRSF038181 GeneTree:ENSGT00530000063109 OMA:DGNIVFV
EMBL:FP339597 Ensembl:ENSSSCT00000008162 Uniprot:F1SBF0
Length = 1390
Score = 276 (102.2 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 89/288 (30%), Positives = 145/288 (50%)
Query: 32 SMSSLAVKPDKCAILQETVNQCL--NEKRRREQENNYIEELAELISAASFAESMSSLAVK 89
S+ LA K + +T Q L + ++ R ++ + E + +A+ ++ + + VK
Sbjct: 9 SLDPLAPDSRKRKLPCDTPGQGLTCSGEKWRREQESKYIEELAELISANLSD-IDNFNVK 67
Query: 90 PDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVV 149
PDKCAIL+ETV QIR IK+Q QG VI + LGPLLL+AL+GFLFVV
Sbjct: 68 PDKCAILKETVRQIRQIKEQG-------QG--------VIDKDSLGPLLLQALDGFLFVV 112
Query: 150 NPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSG 209
N +G + F +EN+ +++Y +++++ SVY+++H D F L S+ WT+++
Sbjct: 113 NREGNIVFVSENVTQYLQYKQEDLVNTSVYSILHEEDRKDFLKNLPKSTVNGVTWTNETQ 172
Query: 210 GQAGKRPSLTASTPNRTFNIRLLISSTH------LTAGLSRAGGENGQ----DDSGDVSS 259
Q + TFN R+L+ H T+ R E Q +
Sbjct: 173 RQK-----------SHTFNCRMLMKIPHDILEDMNTSPEMRQRYETMQCFALSQPRAMME 221
Query: 260 EGGP---CLMCVARRIPPTDKQLSAPIEQFTMKLDRSGTIIGMDTSGV 304
EG C++CVARRI ++ + E F + D SG ++ +DT+ +
Sbjct: 222 EGEDLQSCMICVARRITTGERAFPSNPESFITRHDLSGKVVSIDTNSL 269
Score = 155 (59.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 44/116 (37%), Positives = 62/116 (53%)
Query: 3 CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQ 62
C EK RREQE+ YIEELAELISA + + VKPDKCAIL+ETV Q ++ +EQ
Sbjct: 33 CSGEKWRREQESKYIEELAELISAN--LSDIDNFNVKPDKCAILKETVRQI---RQIKEQ 87
Query: 63 ENNYIEE--LAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
I++ L L+ A + + + + E V Q KQ++ + +V
Sbjct: 88 GQGVIDKDSLGPLLLQA--LDGFLFVVNREGNIVFVSENVTQYLQYKQEDLVNTSV 141
>FB|FBgn0041092 [details] [associations]
symbol:tai "taiman" species:7227 "Drosophila melanogaster"
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0008230 "ecdysone receptor holocomplex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035258 "steroid hormone
receptor binding" evidence=IPI] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0030374 "ligand-dependent nuclear
receptor transcription coactivator activity" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0048675
"axon extension" evidence=IMP] [GO:0060250 "germ-line stem-cell
niche homeostasis" evidence=IMP] InterPro:IPR000014
InterPro:IPR011598 PROSITE:PS50112 SMART:SM00091 SMART:SM00353
GO:GO:0005634 EMBL:AE014134 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0007298 GO:GO:0004871 SUPFAM:SSF47459
GO:GO:0030374 GO:GO:0048676 GeneTree:ENSGT00670000098037
GO:GO:0060250 FlyBase:FBgn0041092 RefSeq:NP_001188746.1
RefSeq:NP_001245949.1 RefSeq:NP_523521.3 ProteinModelPortal:Q9VLD9
SMR:Q9VLD9 STRING:Q9VLD9 EnsemblMetazoa:FBtr0304974 GeneID:34242
KEGG:dme:Dmel_CG13109 UCSC:CG13109-RA CTD:34242 InParanoid:Q9VLD9
OMA:LNSENDM PhylomeDB:Q9VLD9 GenomeRNAi:34242 NextBio:787550
ArrayExpress:Q9VLD9 Bgee:Q9VLD9 Uniprot:Q9VLD9
Length = 2047
Score = 225 (84.3 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 76/271 (28%), Positives = 129/271 (47%)
Query: 2 KCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRRE 61
KC NEKRRRE EN YIE+L+E+++ + S+ KPDK AIL + V + E +
Sbjct: 240 KCNNEKRRREAENGYIEQLSEILTLNKRGDMTST---KPDKAAILNQVV-RTYREICDKG 295
Query: 62 QENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEV 121
Q N I + + ++ + ++ + + + Q T + S VQQGEV
Sbjct: 296 Q-NRDISSTSTNNNNSTTTTNNNTNSNNNNNTSKPQATSTRCSRCATDNCSIHPVQQGEV 354
Query: 122 SSSKPTVITNEVL-GPL-----LLEALEGF-------LFVVNPDGYVNFCTENIKSFIRY 168
SS++P + +L G + EALE + L VN +G + CT+NI+ I Y
Sbjct: 355 SSTEPPLPEPSLLLGQVPEISAYFEALEHYISGVGWVLLQVNANGIIESCTQNIRDLIGY 414
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFN 228
+QE+ + +Y ++ GDHA+ + + N S+S +G S +A T +
Sbjct: 415 EKQELYHQPLYMYLYSGDHAKLEPIINTMYNNPNGGNSNSANNSGPGGS-SAGTSAGVWG 473
Query: 229 IRLLISSTHLTAGLSRAGGENGQDDSGDVSS 259
+++ + + G S + G G +G ++
Sbjct: 474 DLEELNNGNASQG-SNSSGAGGLGGAGGAAA 503
Score = 152 (58.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 42/115 (36%), Positives = 62/115 (53%)
Query: 20 LAELISA--ASFAESMSSLAVKPD-KCAILQETVNQCLNEKRRREQENNYIEELAELISA 76
+A ISA A+ A S + K D K + Q +N+C NEKRRRE EN YIE+L+E+++
Sbjct: 205 VASPISANSANSATSGRKIRRKTDSKVNLPQSQINKCNNEKRRREAENGYIEQLSEILTL 264
Query: 77 ASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITN 131
+ S+ KPDK AIL + V R I + + D + +++ T TN
Sbjct: 265 NKRGDMTST---KPDKAAILNQVVRTYREICDKGQNRD-ISSTSTNNNNSTTTTN 315
Score = 64 (27.6 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 282 PIEQFTMKLDRSGTIIGMDTSGVSQTHTQYL 312
PIEQ T KLD G I+ +D + + + Q+L
Sbjct: 589 PIEQMTFKLDIHGKILTLDPTALREPFKQHL 619
Score = 57 (25.1 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 236 THLTAGLSRAGGENGQDDSGDVSSEGGPCL 265
THL GL G + G +S +S GGP +
Sbjct: 771 THLLGGLVGGGQQGGGGNSTQTTSVGGPLM 800
Score = 45 (20.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 228 NIRLLISSTHLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTDKQLSAPIEQFT 287
N++L+I L AG G ++ G + + G + ++R P+D QLS Q
Sbjct: 1545 NLQLIIK---LIVSYILAGMNAGLNNIGSLLNTTGAPNVSLSRTNLPSDAQLSPNFAQTL 1601
Query: 288 MK 289
M+
Sbjct: 1602 MQ 1603
Score = 41 (19.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 25/112 (22%), Positives = 42/112 (37%)
Query: 166 IRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNR 225
+ Y +Q+V G + G ++ + + +S Q W S GG G L + R
Sbjct: 1654 LAYQQQQV-GDGGRSNTPFGSNSGMQSPGMQNSPQ--QWGSGGGGGGGPGGPLPSGNAGR 1710
Query: 226 TF---NIRLLISSTHLTAGLSRAGGEN---GQDDSGDVSSEGGPCLMCVARR 271
T N L+ ++ +R +N G + G V G P +R
Sbjct: 1711 TLQQHNPMLIAQLQGVSPYNARQYQQNQRRGLNSPGAVGPGGNPAAQAALQR 1762
>UNIPROTKB|C9JK03 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000982
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005737 GO:GO:0003677 GO:GO:0009649 GO:GO:0005667
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 GO:GO:0001190
Gene3D:4.10.280.10 SUPFAM:SSF47459 HGNC:HGNC:2082 EMBL:AC069200
EMBL:AC024243 EMBL:AC110372 IPI:IPI00853422
ProteinModelPortal:C9JK03 SMR:C9JK03 STRING:C9JK03
Ensembl:ENST00000435527 HOGENOM:HOG000171249 ArrayExpress:C9JK03
Bgee:C9JK03 Uniprot:C9JK03
Length = 182
Score = 187 (70.9 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 46/151 (30%), Positives = 84/151 (55%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +S++N I G+H+ + L S+H
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL--STH 173
>UNIPROTKB|Q9DG35 [details] [associations]
symbol:BMAL1 "BHLH-PAS transcription factor BMAL1"
species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IEA] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0043425
"bHLH transcription factor binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0007623 GO:GO:0005667 GO:GO:0000060
GO:GO:0004871 GO:GO:0000982 TIGRFAMs:TIGR00229 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042176 HOVERGEN:HBG000164 UniGene:Gga.1329 EMBL:AADN02030623
EMBL:AF193070 IPI:IPI00679553 STRING:Q9DG35
Ensembl:ENSGALT00000008634 HOGENOM:HOG000199297 InParanoid:Q9DG35
Uniprot:Q9DG35
Length = 127
Score = 170 (64.9 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 42/135 (31%), Positives = 79/135 (58%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 2 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 49
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 50 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 109
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 110 GQSLFDYLHPKDIAK 124
>UNIPROTKB|F1RVI1 [details] [associations]
symbol:CLOCK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CU861936 Ensembl:ENSSSCT00000009755
OMA:ANARRAW Uniprot:F1RVI1
Length = 410
Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 47/151 (31%), Positives = 84/151 (55%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L S+H
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEVYKIL--STH 173
>FB|FBgn0264075 [details] [associations]
symbol:tgo "tango" species:7227 "Drosophila melanogaster"
[GO:0007422 "peripheral nervous system development" evidence=TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=TAS;IPI]
[GO:0005634 "nucleus" evidence=IC;ISS;IDA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=TAS] [GO:0007425 "epithelial cell fate
determination, open tracheal system" evidence=NAS;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA;TAS;IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0071456 "cellular
response to hypoxia" evidence=IDA] [GO:0032869 "cellular response
to insulin stimulus" evidence=IDA] [GO:0043565 "sequence-specific
DNA binding" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043234 "protein
complex" evidence=IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008347 "glial cell migration"
evidence=IMP] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 EMBL:AE014297 GO:GO:0005634
GO:GO:0005737 GO:GO:0043234 GO:GO:0007420 GO:GO:0032869
GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 GO:GO:0071456
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048813 GO:GO:0004871 GO:GO:0007517 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
KO:K09097 EMBL:AB002556 EMBL:AF016053 EMBL:AF020426 EMBL:AF154417
EMBL:AY069581 EMBL:M14550 RefSeq:NP_731308.1 UniGene:Dm.3376
ProteinModelPortal:O15945 SMR:O15945 IntAct:O15945 MINT:MINT-875932
STRING:O15945 PaxDb:O15945 EnsemblMetazoa:FBtr0082005 GeneID:41084
KEGG:dme:Dmel_CG11987 CTD:41084 FlyBase:FBgn0015014
InParanoid:O15945 OMA:QPVTEGY OrthoDB:EOG4GTHV2 PhylomeDB:O15945
GenomeRNAi:41084 NextBio:822075 Bgee:O15945 GermOnline:CG11987
GO:GO:0007425 GO:GO:0008347 Uniprot:O15945
Length = 642
Score = 189 (71.6 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 69/237 (29%), Positives = 112/237 (47%)
Query: 51 NQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ- 109
N C E+RRR + YI EL++++ S +LA KPDK IL+ V ++ ++
Sbjct: 17 NHCEIERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVAHMKALRGTG 70
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRY 168
TSSD KP+ +T++ L L+LEA +GFLFVV+ D G V + ++++ + Y
Sbjct: 71 NTSSDGTY-------KPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNY 123
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD--SGG--QAGKRPSLTAST-P 223
++ + G S+Y IH D + L Q D SG + G + S+ S
Sbjct: 124 TQSDWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGA 183
Query: 224 NRTFNIRLLISSTH---LTAG-LSRAGGENGQDDSGDVSSEGGPCLMCVARRIPPTD 276
R F R+ + + + + +G L+R N S D ++ + PPTD
Sbjct: 184 RRGFICRMRVGNVNPESMVSGHLNRLKQRNSLGPSRDGTNYAVVHCTGYIKNWPPTD 240
>MGI|MGI:99698 [details] [associations]
symbol:Clock "circadian locomotor output cycles kaput"
species:10090 "Mus musculus" [GO:0000077 "DNA damage checkpoint"
evidence=ISO] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=ISO] [GO:0000982
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IC]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA;IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IDA;IMP]
[GO:0008134 "transcription factor binding" evidence=ISA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016746
"transferase activity, transferring acyl groups" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI;IC;ISO;IDA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0070888 "E-box binding" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:99698 GO:GO:0005829 GO:GO:0000077 GO:GO:0005694
GO:GO:0009649 GO:GO:0016573 GO:GO:0005667 GO:GO:0000978
GO:GO:0001077 GO:GO:0004871 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0071479 GO:GO:0070888
Reactome:REACT_109335 Reactome:REACT_24972 PDB:4F3L PDBsum:4F3L
GO:GO:0004402 CTD:9575 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 KO:K02223 OMA:AHEKMAQ OrthoDB:EOG476JZV
EMBL:AF000998 EMBL:AF146793 IPI:IPI00230536 IPI:IPI00420596
RefSeq:NP_031741.1 UniGene:Mm.3552 UniGene:Mm.392894
ProteinModelPortal:O08785 SMR:O08785 DIP:DIP-30958N IntAct:O08785
MINT:MINT-4654078 STRING:O08785 PhosphoSite:O08785 PRIDE:O08785
DNASU:12753 Ensembl:ENSMUST00000075159 GeneID:12753 KEGG:mmu:12753
InParanoid:O08785 NextBio:282092 Bgee:O08785 CleanEx:MM_CLOCK
Genevestigator:O08785 GermOnline:ENSMUSG00000029238 Uniprot:O08785
Length = 855
Score = 189 (71.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 46/151 (30%), Positives = 84/151 (55%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKET 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +S++N I G+H+ + L S+H
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL--STH 173
>UNIPROTKB|F1PSD8 [details] [associations]
symbol:CLOCK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0000077 GO:GO:0005694
GO:GO:0005667 GO:GO:0000978 GO:GO:0004871 GO:GO:0000982
GO:GO:0032922 SMART:SM00086 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071479 GO:GO:0070888 OMA:AHEKMAQ EMBL:AAEX03009082
Ensembl:ENSCAFT00000003400 Uniprot:F1PSD8
Length = 848
Score = 188 (71.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 47/151 (31%), Positives = 84/151 (55%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 38 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 88
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E+I S + +
Sbjct: 89 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESITSLLEH 145
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +S++N I G+H+ + L S+H
Sbjct: 146 LPSDLVDQSIFNFIPEGEHSEVYKML--STH 174
>UNIPROTKB|Q91YB0 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:1026970 "Nannospalax galili" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 EMBL:AJ318057
GO:GO:0005737 GO:GO:0005694 GO:GO:0003677 GO:GO:0016573
GO:GO:0003700 GO:GO:0006351 GO:GO:0006974 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 GO:GO:0004402 HOVERGEN:HBG050997
ProteinModelPortal:Q91YB0 Uniprot:Q91YB0
Length = 865
Score = 188 (71.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 47/151 (31%), Positives = 84/151 (55%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L S+H
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEVYKIL--STH 173
>UNIPROTKB|Q91YB2 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:164324 "Spalax carmeli" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0016573 GO:GO:0003700
GO:GO:0006351 GO:GO:0006974 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 GO:GO:0004402 HOVERGEN:HBG050997 EMBL:AJ318058
ProteinModelPortal:Q91YB2 Uniprot:Q91YB2
Length = 865
Score = 188 (71.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 47/151 (31%), Positives = 84/151 (55%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L S+H
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEVYKIL--STH 173
>UNIPROTKB|I3LEG6 [details] [associations]
symbol:I3LEG6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 Gene3D:4.10.280.10
GeneTree:ENSGT00530000063109 EMBL:CU468851
Ensembl:ENSSSCT00000026562 Uniprot:I3LEG6
Length = 89
Score = 162 (62.1 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/54 (66%), Positives = 42/54 (77%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV QIR IK+Q
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQIRQIKEQ 86
Score = 139 (54.0 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 34/60 (56%), Positives = 42/60 (70%)
Query: 6 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENN 65
EKR REQEN YIEELAELI A +F + + + KPDKCAIL+ETV Q ++ +EQ N
Sbjct: 35 EKRNREQENKYIEELAELIFA-NFND-IDNFNFKPDKCAILKETVKQI---RQIKEQGKN 89
>UNIPROTKB|D4A4R8 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:620271
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00201128 UniGene:Rn.205839 EMBL:CH473981
Ensembl:ENSRNOT00000002981 Uniprot:D4A4R8
Length = 833
Score = 187 (70.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 47/151 (31%), Positives = 83/151 (54%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG V + +E + S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSVVYVSETVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +S++N I G+H+ + L S+H
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL--STH 173
>UNIPROTKB|F1MLT7 [details] [associations]
symbol:CLOCK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0000077 GO:GO:0005694
GO:GO:0005667 GO:GO:0000978 GO:GO:0004871 GO:GO:0000982
GO:GO:0032922 SMART:SM00086 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071479 GO:GO:0070888 OMA:AHEKMAQ EMBL:DAAA02017731
EMBL:DAAA02017732 IPI:IPI00999446 Ensembl:ENSBTAT00000061480
Uniprot:F1MLT7
Length = 846
Score = 187 (70.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/151 (30%), Positives = 84/151 (55%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 38 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 88
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 89 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 145
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +S++N I G+H+ + L S+H
Sbjct: 146 LPSDLVDQSIFNFIPEGEHSEVYKIL--STH 174
>UNIPROTKB|O15516 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IDA] [GO:0000077
"DNA damage checkpoint" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0032922 "circadian regulation of gene expression" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0007623 "circadian rhythm"
evidence=TAS] [GO:0009648 "photoperiodism" evidence=TAS]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IDA] [GO:0070888
"E-box binding" evidence=IDA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=ISS] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005829 GO:GO:0000077
GO:GO:0005694 GO:GO:0007165 GO:GO:0009649 GO:GO:0016573
GO:GO:0005667 GO:GO:0000978 GO:GO:0004871 GO:GO:0000982
GO:GO:0032922 SMART:SM00086 GO:GO:0001190 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0071479 GO:GO:0070888
Pathway_Interaction_DB:circadianpathway Reactome:REACT_24941
PDB:4H10 PDBsum:4H10 GO:GO:0004402 GO:GO:0009648 CTD:9575
eggNOG:NOG300360 HOGENOM:HOG000234382 HOVERGEN:HBG050997 KO:K02223
EMBL:AF011568 EMBL:AH008440 EMBL:EF015897 EMBL:AB002332
EMBL:AK291708 EMBL:BC126157 EMBL:BC126159 EMBL:AB005535
IPI:IPI00007284 RefSeq:NP_001254772.1 RefSeq:NP_004889.1
UniGene:Hs.436975 UniGene:Hs.689578 ProteinModelPortal:O15516
SMR:O15516 IntAct:O15516 STRING:O15516 PhosphoSite:O15516
PRIDE:O15516 DNASU:9575 Ensembl:ENST00000309964
Ensembl:ENST00000381322 Ensembl:ENST00000513440 GeneID:9575
KEGG:hsa:9575 UCSC:uc003haz.1 GeneCards:GC04M056294 HGNC:HGNC:2082
HPA:HPA001867 HPA:HPA027565 MIM:601851 neXtProt:NX_O15516
PharmGKB:PA26609 InParanoid:O15516 OMA:AHEKMAQ OrthoDB:EOG476JZV
PhylomeDB:O15516 GenomeRNAi:9575 NextBio:35907 ArrayExpress:O15516
Bgee:O15516 CleanEx:HS_CLOCK Genevestigator:O15516
GermOnline:ENSG00000134852 Uniprot:O15516
Length = 846
Score = 187 (70.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/151 (30%), Positives = 84/151 (55%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +S++N I G+H+ + L S+H
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL--STH 173
>UNIPROTKB|Q5RAK8 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9601 "Pongo abelii" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0005694
GO:GO:0003677 GO:GO:0016573 GO:GO:0003700 GO:GO:0006351
GO:GO:0006974 GO:GO:0005667 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GO:GO:0004402 CTD:9575 HOVERGEN:HBG050997 KO:K02223 EMBL:CR859007
RefSeq:NP_001125706.1 UniGene:Pab.7567 ProteinModelPortal:Q5RAK8
GeneID:100172630 KEGG:pon:100172630 InParanoid:Q5RAK8
Uniprot:Q5RAK8
Length = 846
Score = 187 (70.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 46/151 (30%), Positives = 84/151 (55%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +S++N I G+H+ + L S+H
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL--STH 173
>UNIPROTKB|F1NKI9 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AADN02031315
EMBL:AADN02031314 IPI:IPI00581385 Ensembl:ENSGALT00000037539
ArrayExpress:F1NKI9 Uniprot:F1NKI9
Length = 854
Score = 187 (70.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 47/151 (31%), Positives = 83/151 (54%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 173
>UNIPROTKB|F1M012 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:620271
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 IPI:IPI00557436 Ensembl:ENSRNOT00000051891
ArrayExpress:F1M012 Uniprot:F1M012
Length = 857
Score = 187 (70.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 47/151 (31%), Positives = 83/151 (54%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 39 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 89
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG V + +E + S + +
Sbjct: 90 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSVVYVSETVTSLLEH 146
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +S++N I G+H+ + L S+H
Sbjct: 147 LPSDLVDQSIFNFIPEGEHSEVYKIL--STH 175
>UNIPROTKB|F1NKI8 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AADN02031315
EMBL:AADN02031314 IPI:IPI01017404 Ensembl:ENSGALT00000037540
ArrayExpress:F1NKI8 Uniprot:F1NKI8
Length = 859
Score = 187 (70.9 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 47/151 (31%), Positives = 83/151 (54%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 38 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 88
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 89 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTPLLEH 145
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 146 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 174
>UNIPROTKB|Q8QGQ6 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0071479
"cellular response to ionizing radiation" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0000077 GO:GO:0005694 GO:GO:0005667
GO:GO:0000978 GO:GO:0004871 GO:GO:0000982 GO:GO:0032922
SMART:SM00086 GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 GO:GO:0071479 GO:GO:0070888 EMBL:AF132531 EMBL:AF144425
EMBL:AF246959 IPI:IPI00814237 IPI:IPI00819507 RefSeq:NP_989505.2
UniGene:Gga.2707 ProteinModelPortal:Q8QGQ6 STRING:Q8QGQ6
GeneID:373991 KEGG:gga:373991 CTD:9575 eggNOG:NOG300360
HOGENOM:HOG000234382 HOVERGEN:HBG050997 InParanoid:Q8QGQ6 KO:K02223
NextBio:20813520 ArrayExpress:Q8QGQ6 Uniprot:Q8QGQ6
Length = 875
Score = 187 (70.9 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 47/151 (31%), Positives = 83/151 (54%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 173
>UNIPROTKB|F1P1C0 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0071479 "cellular response to ionizing radiation" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0000077 GO:GO:0005694 GO:GO:0005667 GO:GO:0000978
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0071479 GO:GO:0070888 IPI:IPI00819507
OMA:AHEKMAQ EMBL:AADN02031315 EMBL:AADN02031314
Ensembl:ENSGALT00000022394 ArrayExpress:F1P1C0 Uniprot:F1P1C0
Length = 877
Score = 187 (70.9 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 47/151 (31%), Positives = 83/151 (54%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTPLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L SSH
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEIYKIL--SSH 173
>ZFIN|ZDB-GENE-000509-2 [details] [associations]
symbol:arntl2 "aryl hydrocarbon receptor nuclear
translocator-like 2" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009648 "photoperiodism" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009416 "response
to light stimulus" evidence=IGI] [GO:0007623 "circadian rhythm"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-2
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG107503 OrthoDB:EOG4DFPNB GO:GO:0009648
eggNOG:NOG285764 EMBL:BC128806 IPI:IPI00482035 UniGene:Dr.81323
ProteinModelPortal:A1A5T9 InParanoid:A1A5T9 ArrayExpress:A1A5T9
Uniprot:A1A5T9
Length = 631
Score = 185 (70.2 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 57/171 (33%), Positives = 95/171 (55%)
Query: 22 ELISAASFAESMSSLAVKPD-----KCAILQETVNQCLNEKRRREQENNYIEELAELISA 76
E+ SA++ E M A + + K ++E +Q EKRRR++ NN I+ELA +I
Sbjct: 61 EMKSASNLDEDMEDDAGRSEDDQHLKIKCIREPHSQI--EKRRRDKMNNLIDELAAMIPT 118
Query: 77 ASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGP 136
+ MS K DK +L+ V ++++K TSS A ++ KP + ++ L
Sbjct: 119 CN---PMSR---KLDKLTVLRMAVQHLKSLKGA-TSSFAE-----ANYKPAFLPDDELKH 166
Query: 137 LLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGD 186
L+L A +GFLFVV D G + F +E++ + YSR E++G+S+++ +H D
Sbjct: 167 LVLRAADGFLFVVGCDRGKIVFVSESVSKTLNYSRTELIGQSLFDYVHPKD 217
>UNIPROTKB|F1S6X1 [details] [associations]
symbol:LOC100738978 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CU914667
Ensembl:ENSSSCT00000014635 OMA:KKXILNG Uniprot:F1S6X1
Length = 273
Score = 175 (66.7 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>RGD|620271 [details] [associations]
symbol:Clock "clock circadian regulator" species:10116 "Rattus
norvegicus" [GO:0000077 "DNA damage checkpoint" evidence=IEA;ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO;ISS] [GO:0005694 "chromosome" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=ISO;NAS] [GO:0009649
"entrainment of circadian clock" evidence=IEP] [GO:0032922
"circadian regulation of gene expression" evidence=IEA;ISO;ISS]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0070888 "E-box binding"
evidence=IEA;ISO] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
RGD:620271 GO:GO:0005737 GO:GO:0000077 GO:GO:0005694 GO:GO:0009649
GO:GO:0016573 GO:GO:0003700 GO:GO:0005667 GO:GO:0000978
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GO:GO:0071479 GO:GO:0070888 GO:GO:0004402 CTD:9575 eggNOG:NOG300360
HOGENOM:HOG000234382 HOVERGEN:HBG050997 KO:K02223 EMBL:AB019258
EMBL:AB019259 IPI:IPI00201128 IPI:IPI00205319 RefSeq:NP_068628.1
UniGene:Rn.205839 ProteinModelPortal:Q9WVS9 STRING:Q9WVS9
PhosphoSite:Q9WVS9 GeneID:60447 KEGG:rno:60447 UCSC:RGD:620271
InParanoid:Q9WVS9 NextBio:612192 ArrayExpress:Q9WVS9
Genevestigator:Q9WVS9 GermOnline:ENSRNOG00000002175 Uniprot:Q9WVS9
Length = 862
Score = 186 (70.5 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 46/151 (30%), Positives = 83/151 (54%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E + S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSETVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +S++N I G+H+ + L S+H
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL--STH 173
>UNIPROTKB|Q9WVS9 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:620271
GO:GO:0005737 GO:GO:0000077 GO:GO:0005694 GO:GO:0009649
GO:GO:0016573 GO:GO:0003700 GO:GO:0005667 GO:GO:0000978
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GO:GO:0071479 GO:GO:0070888 GO:GO:0004402 CTD:9575 eggNOG:NOG300360
HOGENOM:HOG000234382 HOVERGEN:HBG050997 KO:K02223 EMBL:AB019258
EMBL:AB019259 IPI:IPI00201128 IPI:IPI00205319 RefSeq:NP_068628.1
UniGene:Rn.205839 ProteinModelPortal:Q9WVS9 STRING:Q9WVS9
PhosphoSite:Q9WVS9 GeneID:60447 KEGG:rno:60447 UCSC:RGD:620271
InParanoid:Q9WVS9 NextBio:612192 ArrayExpress:Q9WVS9
Genevestigator:Q9WVS9 GermOnline:ENSRNOG00000002175 Uniprot:Q9WVS9
Length = 862
Score = 186 (70.5 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 46/151 (30%), Positives = 83/151 (54%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A K DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN---------ARKMDKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E + S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSETVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +S++N I G+H+ + L S+H
Sbjct: 145 LPSDLVDQSIFNFIPEGEHSEVYKIL--STH 173
>UNIPROTKB|Q91YA8 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:134510 "Nannospalax judaei" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0016573 GO:GO:0003700
GO:GO:0006351 GO:GO:0006974 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0004402 HOVERGEN:HBG050997 EMBL:AJ318059 HSSP:Q99814
ProteinModelPortal:Q91YA8 Uniprot:Q91YA8
Length = 865
Score = 186 (70.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 47/151 (31%), Positives = 84/151 (55%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ A M DK +LQ++++ +R K+
Sbjct: 37 VSRNKSEKKRRDQFNVLIKELGSMLPGN--AREM-------DKSTVLQKSIDFLRKHKEI 87
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
SDA E+ KPT ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 88 TAQSDA---SEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEH 144
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
+++ +SV+N I G+H+ + L S+H
Sbjct: 145 LPSDLVDQSVFNFIPEGEHSEVYKIL--STH 173
>UNIPROTKB|G3N3F0 [details] [associations]
symbol:G3N3F0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:DAAA02052316 OMA:ENSMTGQ EMBL:DAAA02052315
Ensembl:ENSBTAT00000064165 Uniprot:G3N3F0
Length = 207
Score = 159 (61.0 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 43/147 (29%), Positives = 77/147 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 62 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKST- 114
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G + KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 115 --DG---AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 169
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
G ++Y +H D + L S + +
Sbjct: 170 GSTLYEQVHPDDVEKLREQLCTSENSM 196
>UNIPROTKB|F1RIF2 [details] [associations]
symbol:ARNT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0017162 "aryl hydrocarbon
receptor binding" evidence=IEA] [GO:0007417 "central nervous system
development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0001701 GO:GO:0045944 GO:GO:0007417
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CT757497 EMBL:CT841532 Ensembl:ENSSSCT00000001996 OMA:ENSMTGQ
Uniprot:F1RIF2
Length = 208
Score = 159 (61.0 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 43/147 (29%), Positives = 77/147 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 63 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKST- 115
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G + KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 116 --DG---AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 170
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
G ++Y +H D + L S + +
Sbjct: 171 GSTLYEQVHPDDVEKLREQLCTSENSM 197
>UNIPROTKB|F8W6J9 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884
EMBL:AC022878 IPI:IPI00217732 HGNC:HGNC:701
ProteinModelPortal:F8W6J9 SMR:F8W6J9 Ensembl:ENST00000389708
ArrayExpress:F8W6J9 Bgee:F8W6J9 Uniprot:F8W6J9
Length = 526
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>UNIPROTKB|E1BLF5 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000060
"protein import into nucleus, translocation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0005667 GO:GO:0000060 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042176 CTD:406 KO:K02296 OMA:EKINTNC EMBL:DAAA02040648
IPI:IPI00712443 RefSeq:NP_001178099.1 UniGene:Bt.39079 PRIDE:E1BLF5
Ensembl:ENSBTAT00000017323 GeneID:530705 KEGG:bta:530705
NextBio:20875311 Uniprot:E1BLF5
Length = 626
Score = 175 (66.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>UNIPROTKB|O00327 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
factor binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] [GO:0003677 "DNA binding"
evidence=IGI] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IPI] [GO:0051879
"Hsp90 protein binding" evidence=IDA] [GO:0000982 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
EMBL:CH471064 GO:GO:0003677 GO:GO:0045944 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
HOGENOM:HOG000234379 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0051879 GO:GO:0042176 Pathway_Interaction_DB:circadianpathway
Reactome:REACT_24941 CTD:406 HOVERGEN:HBG107503 KO:K02296
OMA:EKINTNC OrthoDB:EOG4NS3B2 EMBL:D89722 EMBL:AB000812
EMBL:AB000813 EMBL:AB000814 EMBL:AB000815 EMBL:AB000816 EMBL:U51627
EMBL:U60415 EMBL:AF044288 EMBL:AK095749 EMBL:AK291510 EMBL:EF015894
EMBL:AC016884 EMBL:AC022878 EMBL:BC016674 EMBL:BC031214
EMBL:BC041129 IPI:IPI00217732 IPI:IPI00217734 IPI:IPI00217735
IPI:IPI00217736 IPI:IPI00412162 IPI:IPI00413132 IPI:IPI00783543
IPI:IPI00879656 IPI:IPI00910251 PIR:JC5405 PIR:JC5407 PIR:PC4288
PIR:PC4289 RefSeq:NP_001025443.1 RefSeq:NP_001025444.1
RefSeq:NP_001169.3 UniGene:Hs.65734 PDB:4H10 PDBsum:4H10
ProteinModelPortal:O00327 SMR:O00327 IntAct:O00327 STRING:O00327
PhosphoSite:O00327 PaxDb:O00327 PRIDE:O00327 DNASU:406
Ensembl:ENST00000361003 Ensembl:ENST00000389707
Ensembl:ENST00000396441 Ensembl:ENST00000401424
Ensembl:ENST00000403290 Ensembl:ENST00000403482
Ensembl:ENST00000403510 GeneID:406 KEGG:hsa:406 UCSC:uc001mkp.3
UCSC:uc001mkr.3 UCSC:uc001mks.3 UCSC:uc001mkx.3 UCSC:uc009ygm.1
GeneCards:GC11P013299 HGNC:HGNC:701 MIM:602550 neXtProt:NX_O00327
PharmGKB:PA24996 InParanoid:O00327 GenomeRNAi:406 NextBio:1701
ArrayExpress:O00327 Bgee:O00327 Genevestigator:O00327
GermOnline:ENSG00000133794 Uniprot:O00327
Length = 626
Score = 175 (66.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>UNIPROTKB|A0MLS5 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9796 "Equus caballus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296
OrthoDB:EOG4NS3B2 EMBL:DQ988038 RefSeq:NP_001075390.1
UniGene:Eca.2805 ProteinModelPortal:A0MLS5 STRING:A0MLS5
GeneID:100034115 KEGG:ecb:100034115 InParanoid:A0MLS5
Uniprot:A0MLS5
Length = 626
Score = 175 (66.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>UNIPROTKB|O88529 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10036 "Mesocricetus auratus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG107503 EMBL:AF070917
ProteinModelPortal:O88529 IntAct:O88529 Uniprot:O88529
Length = 626
Score = 175 (66.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>UNIPROTKB|Q91YA9 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:1026970 "Nannospalax galili"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 EMBL:AJ318060 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0032922 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
HOVERGEN:HBG107503 ProteinModelPortal:Q91YA9 Uniprot:Q91YA9
Length = 626
Score = 175 (66.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>UNIPROTKB|E2R130 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03012928
Ensembl:ENSCAFT00000012969 Uniprot:E2R130
Length = 627
Score = 175 (66.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>MGI|MGI:1096381 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear
translocator-like" species:10090 "Mus musculus" [GO:0000060
"protein import into nucleus, translocation" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IC]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISO;IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISA;IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISA;IDA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IDA;IMP] [GO:0008134 "transcription factor binding"
evidence=ISA] [GO:0016604 "nuclear body" evidence=IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=ISO] [GO:0032922
"circadian regulation of gene expression" evidence=IDA] [GO:0042176
"regulation of protein catabolic process" evidence=IDA] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IC;ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:1096381 GO:GO:0005829 GO:GO:0003677 GO:GO:0005667
GO:GO:0001077 GO:GO:0000060 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0042176
GO:GO:0016604 Reactome:REACT_109335 Reactome:REACT_24972 CTD:406
HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC OrthoDB:EOG4NS3B2
EMBL:AB012601 EMBL:AB015203 EMBL:AB012602 EMBL:AB014494
EMBL:BC025973 EMBL:BC011080 IPI:IPI00403502 IPI:IPI00462286
IPI:IPI00474434 IPI:IPI00474567 IPI:IPI00875930 PIR:JE0270
RefSeq:NP_001229977.1 RefSeq:NP_031515.1 UniGene:Mm.440371 PDB:4F3L
PDBsum:4F3L ProteinModelPortal:Q9WTL8 SMR:Q9WTL8 DIP:DIP-43977N
IntAct:Q9WTL8 MINT:MINT-1657344 STRING:Q9WTL8 PhosphoSite:Q9WTL8
PaxDb:Q9WTL8 PRIDE:Q9WTL8 Ensembl:ENSMUST00000047321 GeneID:11865
KEGG:mmu:11865 UCSC:uc009jhf.1 UCSC:uc009jhi.1 UCSC:uc009jhj.1
InParanoid:Q9WTL8 NextBio:279875 Bgee:Q9WTL8 Genevestigator:Q9WTL8
GermOnline:ENSMUSG00000055116 Uniprot:Q9WTL8
Length = 632
Score = 175 (66.7 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 88 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 136 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 195
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 196 GQSLFDYLHPKDIAK 210
>ZFIN|ZDB-GENE-060126-7 [details] [associations]
symbol:arnt "aryl hydrocarbon receptor nuclear
translocator" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IPI] [GO:0009410 "response to xenobiotic
stimulus" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IPI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0009636
"response to toxic substance" evidence=IMP] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-060126-7
GO:GO:0005737 GO:GO:0045893 GO:GO:0009636 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:BX927222
IPI:IPI00997127 Ensembl:ENSDART00000121648 Bgee:E7FDK6
Uniprot:E7FDK6
Length = 746
Score = 176 (67.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 56/187 (29%), Positives = 98/187 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ A S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 72 ERRRRNKMTAYITELSDMVPACS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 125
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
KP+ +T++ L L+LEA +GFLFVV+ + G V + ++++ + ++ +
Sbjct: 126 GTY-------KPSFLTDQELKHLILEAADGFLFVVSCETGRVVYVSDSVTPVLNQAQSDW 178
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAW---------TSDSGGQAGKRPSLTASTPN 224
LG S+Y+ +H D + L + + N+ GGQA R S+ A
Sbjct: 179 LGSSLYDQLHPDDVEKLREQLSTTENNNNSGRMLDMKTGTVKKEGGQATVRMSMGA---R 235
Query: 225 RTFNIRL 231
R+F R+
Sbjct: 236 RSFICRM 242
>UNIPROTKB|J9NTT7 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:EKINTNC EMBL:AAEX03012928
Ensembl:ENSCAFT00000044767 Uniprot:J9NTT7
Length = 659
Score = 175 (66.7 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 113 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 160
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 161 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 220
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 221 GQSLFDYLHPKDIAK 235
>ZFIN|ZDB-GENE-030408-1 [details] [associations]
symbol:arntl1b "aryl hydrocarbon receptor nuclear
translocator-like 1b" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0009648 "photoperiodism" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-030408-1
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0009648 EMBL:CR318647 IPI:IPI00859492
Ensembl:ENSDART00000098259 OMA:REKINTH Uniprot:E7F4H0
Length = 646
Score = 173 (66.0 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 52/183 (28%), Positives = 94/183 (51%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 107 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 154
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L+A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 155 ANPYTEANYKPAFLSDDELKHLILKAADGFLFVVGCDRGKILFVSESVYKILNYSQNDLI 214
Query: 175 GKSVYNLIHHGDHARFHNCL-----VPSSHQVNAWTS-DSGGQAGKRPSLTASTPNRTFN 228
G+S+++ +H D A+ L P ++A T PS S R+F
Sbjct: 215 GQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVRTDIAPSPSRLCSGARRSFF 274
Query: 229 IRL 231
R+
Sbjct: 275 CRM 277
>WB|WBGene00000095 [details] [associations]
symbol:aha-1 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA;IC;IDA] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040017 "positive regulation of locomotion" evidence=IMP]
[GO:0009410 "response to xenobiotic stimulus" evidence=IDA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] [GO:0005622 "intracellular" evidence=TAS] [GO:0003677
"DNA binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0001708 GO:GO:0005737 GO:GO:0040010 GO:GO:0022008
GO:GO:0003677 GO:GO:0045944 GO:GO:0010171 GO:GO:0040011
GO:GO:0040017 GO:GO:0003700 GO:GO:0005667 GO:GO:0006366
GO:GO:0004871 GO:GO:0035176 SMART:SM00086 TIGRFAMs:TIGR00229
EMBL:AF039569 EMBL:Z81038 PIR:T19440 PIR:T42397
RefSeq:NP_001251326.1 RefSeq:NP_001251327.1 UniGene:Cel.19552
ProteinModelPortal:O02219 SMR:O02219 IntAct:O02219 STRING:O02219
PaxDb:O02219 EnsemblMetazoa:C25A1.11a GeneID:172889
KEGG:cel:CELE_C25A1.11 UCSC:C25A1.11 CTD:172889 WormBase:C25A1.11a
WormBase:C25A1.11b eggNOG:NOG293303 GeneTree:ENSGT00650000092935
HOGENOM:HOG000234379 InParanoid:O02219 OMA:MGENKER NextBio:877411
ArrayExpress:O02219 GO:GO:0030522 GO:GO:0009410 Gene3D:4.10.280.10
SUPFAM:SSF47459 Uniprot:O02219
Length = 453
Score = 169 (64.5 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 49/148 (33%), Positives = 79/148 (53%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + SL KPDK IL+ V+ ++ I+ T+ D
Sbjct: 53 ERRRRNKMTHYINELAEMVPQCA------SLGRKPDKLTILRMAVSHMKGIRGH-TAQDE 105
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV G V + ++I + +++ L
Sbjct: 106 ------TSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWL 159
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+++ LIH D + + L S VN
Sbjct: 160 QRNLNELIHPDDQDKIRDQLCGSEVSVN 187
>UNIPROTKB|O02219 [details] [associations]
symbol:aha-1 "Aryl hydrocarbon receptor nuclear
translocator homolog" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0035176 "social behavior"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0001708
GO:GO:0005737 GO:GO:0040010 GO:GO:0022008 GO:GO:0003677
GO:GO:0045944 GO:GO:0010171 GO:GO:0040011 GO:GO:0040017
GO:GO:0003700 GO:GO:0005667 GO:GO:0006366 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 TIGRFAMs:TIGR00229 EMBL:AF039569
EMBL:Z81038 PIR:T19440 PIR:T42397 RefSeq:NP_001251326.1
RefSeq:NP_001251327.1 UniGene:Cel.19552 ProteinModelPortal:O02219
SMR:O02219 IntAct:O02219 STRING:O02219 PaxDb:O02219
EnsemblMetazoa:C25A1.11a GeneID:172889 KEGG:cel:CELE_C25A1.11
UCSC:C25A1.11 CTD:172889 WormBase:C25A1.11a WormBase:C25A1.11b
eggNOG:NOG293303 GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
InParanoid:O02219 OMA:MGENKER NextBio:877411 ArrayExpress:O02219
GO:GO:0030522 GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459
Uniprot:O02219
Length = 453
Score = 169 (64.5 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 49/148 (33%), Positives = 79/148 (53%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + SL KPDK IL+ V+ ++ I+ T+ D
Sbjct: 53 ERRRRNKMTHYINELAEMVPQCA------SLGRKPDKLTILRMAVSHMKGIRGH-TAQDE 105
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV G V + ++I + +++ L
Sbjct: 106 ------TSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWL 159
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+++ LIH D + + L S VN
Sbjct: 160 QRNLNELIHPDDQDKIRDQLCGSEVSVN 187
>UNIPROTKB|Q5R4T2 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9601 "Pongo abelii"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 CTD:406
HOVERGEN:HBG107503 KO:K02296 EMBL:CR861161 RefSeq:NP_001126900.1
UniGene:Pab.3880 ProteinModelPortal:Q5R4T2 GeneID:100173916
KEGG:pon:100173916 Uniprot:Q5R4T2
Length = 625
Score = 171 (65.3 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 43/135 (31%), Positives = 79/135 (58%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E+ + YS+ +++
Sbjct: 129 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESAFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
>UNIPROTKB|C8YTM6 [details] [associations]
symbol:aha-1 "AHA-1" species:31234 "Caenorhabditis remanei"
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0003677
"DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0009410 "response to xenobiotic stimulus"
evidence=ISS] [GO:0040010 "positive regulation of growth rate"
evidence=ISS] [GO:0040011 "locomotion" evidence=ISS] [GO:0040017
"positive regulation of locomotion" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0001708
GO:GO:0005737 GO:GO:0040010 GO:GO:0003677 GO:GO:0045944
GO:GO:0040011 GO:GO:0040017 GO:GO:0003700 GO:GO:0005667
GO:GO:0006366 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:FJ804774 EMBL:FJ804775 EMBL:FJ804776 EMBL:FJ804777
EMBL:FJ804778 EMBL:FJ804779 EMBL:FJ804781 EMBL:FJ804783
EMBL:FJ804784 EMBL:FJ804785 EMBL:FJ804787 EMBL:FJ804788
EMBL:FJ804789 Uniprot:C8YTM6
Length = 398
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 47/148 (31%), Positives = 77/148 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + SL KPDK IL+ V+ ++ I+ +
Sbjct: 30 ERRRRNKMTHYINELAEMVPQCA------SLGRKPDKLTILRMAVSHMKGIRGHSAQDE- 82
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV G V + ++I + +++ L
Sbjct: 83 ------TSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWL 136
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+++ LIH D + + L S VN
Sbjct: 137 QRNLNELIHPDDQDKIRDQLCGSEVSVN 164
>UNIPROTKB|C8YTN2 [details] [associations]
symbol:aha-1 "AHA-1" species:31234 "Caenorhabditis remanei"
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0003677
"DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0009410 "response to xenobiotic stimulus"
evidence=ISS] [GO:0040010 "positive regulation of growth rate"
evidence=ISS] [GO:0040011 "locomotion" evidence=ISS] [GO:0040017
"positive regulation of locomotion" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0001708
GO:GO:0005737 GO:GO:0040010 GO:GO:0003677 GO:GO:0045944
GO:GO:0040011 GO:GO:0040017 GO:GO:0003700 GO:GO:0005667
GO:GO:0006366 GO:GO:0004871 SMART:SM00086 GO:GO:0009410
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:FJ804780 EMBL:FJ804782
Uniprot:C8YTN2
Length = 398
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 47/148 (31%), Positives = 77/148 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + SL KPDK IL+ V+ ++ I+ +
Sbjct: 30 ERRRRNKMTHYINELAEMVPQCA------SLGRKPDKLTILRMAVSHMKGIRGHSAQDE- 82
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV G V + ++I + +++ L
Sbjct: 83 ------TSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWL 136
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+++ LIH D + + L S VN
Sbjct: 137 QRNLNELIHPDDQDKIRDQLCGSEVSVN 164
>RGD|62003 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear translocator-like"
species:10116 "Rattus norvegicus" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISO] [GO:0000982 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0007623 "circadian rhythm"
evidence=IEP;ISO] [GO:0016604 "nuclear body" evidence=ISO]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=ISO]
[GO:0032922 "circadian regulation of gene expression"
evidence=ISO;ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=NAS] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:62003 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0042752 GO:GO:0005667 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296 EMBL:AB012600
EMBL:AF015953 EMBL:AF317669 EMBL:BC099833 IPI:IPI00339130
IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2 UniGene:Rn.14532
ProteinModelPortal:Q9EPW1 STRING:Q9EPW1 PhosphoSite:Q9EPW1
Ensembl:ENSRNOT00000019645 GeneID:29657 KEGG:rno:29657
UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 174 (66.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTSLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
Score = 38 (18.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 18/84 (21%), Positives = 28/84 (33%)
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTAGLSRAGGENGQDDSGDVSSE 260
+N T D AG P TP ++ S+ + G + +D G S
Sbjct: 541 LNGGTPDIPS-AGLLPGQAQETPGYPYS-----DSSSILGENPHIGIDMIDNDQGSSSPS 594
Query: 261 GGPCLMCVARRIPPTDKQLSAPIE 284
M V + D L P++
Sbjct: 595 NDEAAMAVIMSLLEADAGLGGPVD 618
>UNIPROTKB|Q9EPW1 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:62003
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0042752 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503
KO:K02296 EMBL:AB012600 EMBL:AF015953 EMBL:AF317669 EMBL:BC099833
IPI:IPI00339130 IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2
UniGene:Rn.14532 ProteinModelPortal:Q9EPW1 STRING:Q9EPW1
PhosphoSite:Q9EPW1 Ensembl:ENSRNOT00000019645 GeneID:29657
KEGG:rno:29657 UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 174 (66.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 43/135 (31%), Positives = 80/135 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 81 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 128
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 129 TNPYTEANYKPTSLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 188
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 189 GQSLFDYLHPKDIAK 203
Score = 38 (18.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 18/84 (21%), Positives = 28/84 (33%)
Query: 201 VNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTAGLSRAGGENGQDDSGDVSSE 260
+N T D AG P TP ++ S+ + G + +D G S
Sbjct: 541 LNGGTPDIPS-AGLLPGQAQETPGYPYS-----DSSSILGENPHIGIDMIDNDQGSSSPS 594
Query: 261 GGPCLMCVARRIPPTDKQLSAPIE 284
M V + D L P++
Sbjct: 595 NDEAAMAVIMSLLEADAGLGGPVD 618
>UNIPROTKB|A8XEY9 [details] [associations]
symbol:aha-1 "Protein CBR-AHA-1" species:6238
"Caenorhabditis briggsae" [GO:0001708 "cell fate specification"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0009410 "response to
xenobiotic stimulus" evidence=ISS] [GO:0040010 "positive regulation
of growth rate" evidence=ISS] [GO:0040011 "locomotion"
evidence=ISS] [GO:0040017 "positive regulation of locomotion"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0001708 GO:GO:0005737 GO:GO:0040010
GO:GO:0003677 GO:GO:0045944 GO:GO:0040011 GO:GO:0040017
GO:GO:0003700 GO:GO:0005667 GO:GO:0006366 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
HOGENOM:HOG000234379 GO:GO:0009410 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:HE600958 EnsemblMetazoa:CBG12219
WormBase:CBG12219 Uniprot:A8XEY9
Length = 468
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 47/148 (31%), Positives = 78/148 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + SL KPDK IL+ V+ ++ I+ +
Sbjct: 75 ERRRRNKMTHYINELAEMVPQCA------SLGRKPDKLTILRMAVSHMKGIRGHSAQDE- 127
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV G V + ++I + +++ L
Sbjct: 128 ------TSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWL 181
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+++ +LIH D + + L S VN
Sbjct: 182 QRNLNDLIHPDDQDKIRDQLCGSEVSVN 209
>UNIPROTKB|Q9I8T7 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9031 "Gallus gallus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 GO:GO:0042176
EMBL:AF205219 EMBL:AF246957 IPI:IPI00577807 RefSeq:NP_001001463.1
UniGene:Gga.1329 ProteinModelPortal:Q9I8T7 STRING:Q9I8T7
Ensembl:ENSGALT00000032732 GeneID:374115 KEGG:gga:374115 CTD:406
HOVERGEN:HBG107503 InParanoid:Q9I8T7 KO:K02296 OMA:EKINTNC
OrthoDB:EOG4NS3B2 NextBio:20813631 ArrayExpress:Q9I8T7
Uniprot:Q9I8T7
Length = 633
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 42/135 (31%), Positives = 79/135 (58%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 88 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 135
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + YS+ +++
Sbjct: 136 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLI 195
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 196 GQSLFDYLHPKDIAK 210
>UNIPROTKB|E3MG64 [details] [associations]
symbol:Cre-aha-1 "CRE-AHA-1 protein" species:31234
"Caenorhabditis remanei" [GO:0001708 "cell fate specification"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0009410 "response to
xenobiotic stimulus" evidence=ISS] [GO:0040010 "positive regulation
of growth rate" evidence=ISS] [GO:0040011 "locomotion"
evidence=ISS] [GO:0040017 "positive regulation of locomotion"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0001708 GO:GO:0005737 GO:GO:0040010
GO:GO:0003677 GO:GO:0045944 GO:GO:0040011 GO:GO:0040017
GO:GO:0003700 GO:GO:0005667 GO:GO:0006366 GO:GO:0004871
SMART:SM00086 OMA:MGENKER GO:GO:0009410 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:DS268443 RefSeq:XP_003104870.1
EnsemblMetazoa:CRE23963 GeneID:9809261 CTD:9809261 Uniprot:E3MG64
Length = 451
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 47/148 (31%), Positives = 77/148 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + SL KPDK IL+ V+ ++ I+ +
Sbjct: 52 ERRRRNKMTHYINELAEMVPQCA------SLGRKPDKLTILRMAVSHMKGIRGHSAQDE- 104
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV G V + ++I + +++ L
Sbjct: 105 ------TSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWL 158
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+++ LIH D + + L S VN
Sbjct: 159 QRNLNELIHPDDQDKIRDQLCGSEVSVN 186
>UNIPROTKB|A6NGV6 [details] [associations]
symbol:ARNT "Aryl hydrocarbon receptor nuclear
translocator" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 TIGRFAMs:TIGR00229 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG000164 EMBL:AL355860
HGNC:HGNC:700 ChiTaRS:ARNT IPI:IPI00964540
ProteinModelPortal:A6NGV6 SMR:A6NGV6 STRING:A6NGV6
Ensembl:ENST00000471844 UCSC:uc009wme.2 ArrayExpress:A6NGV6
Bgee:A6NGV6 Uniprot:A6NGV6
Length = 416
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 45/148 (30%), Positives = 84/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 85 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 136
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D S KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 137 SHMKSLRGTGNTSTDG-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 189
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 190 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 217
>UNIPROTKB|G0P4X6 [details] [associations]
symbol:CAEBREN_20344 "Putative uncharacterized protein"
species:135651 "Caenorhabditis brenneri" [GO:0001708 "cell fate
specification" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISS]
[GO:0040010 "positive regulation of growth rate" evidence=ISS]
[GO:0040011 "locomotion" evidence=ISS] [GO:0040017 "positive
regulation of locomotion" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0001708
GO:GO:0005737 GO:GO:0040010 GO:GO:0003677 GO:GO:0045944
GO:GO:0040011 GO:GO:0040017 GO:GO:0003700 GO:GO:0005667
GO:GO:0006366 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
OMA:MGENKER GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:GL380070 EnsemblMetazoa:CBN20344 EnsemblMetazoa:CBN21788
Uniprot:G0P4X6
Length = 451
Score = 166 (63.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 47/148 (31%), Positives = 77/148 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + +YI ELAE++ + SL KPDK IL+ V+ ++ I+ +
Sbjct: 52 ERRRRNKMTHYINELAEMVPQCA------SLGRKPDKLTILRMAVSHMKGIRGHSAPDE- 104
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVN-PDGYVNFCTENIKSFIRYSRQEVL 174
+S KP+ +T++ L L+LEA GFLFVV G V + ++I + +++ L
Sbjct: 105 ------TSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWL 158
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVN 202
+++ LIH D + + L S VN
Sbjct: 159 QRNLNELIHPDDQDKIRDQLCGSEVSVN 186
>UNIPROTKB|P79832 [details] [associations]
symbol:arnt "Aryl hydrocarbon receptor nuclear
translocator" species:8022 "Oncorhynchus mykiss" [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009967 "positive regulation of signal
transduction" evidence=IDA] [GO:0009968 "negative regulation of
signal transduction" evidence=IDA] [GO:0017162 "aryl hydrocarbon
receptor binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0045893 GO:GO:0006355 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 GO:GO:0009967
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG000164 GO:GO:0017162 CTD:405 EMBL:U73840 EMBL:U73841
RefSeq:NP_001118182.1 UniGene:Omy.14654 ProteinModelPortal:P79832
SMR:P79832 IntAct:P79832 GeneID:100136759 GO:GO:0009968
Uniprot:P79832
Length = 723
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 43/132 (32%), Positives = 78/132 (59%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S +
Sbjct: 74 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRG---SGNT 124
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G + KP+ +T++ L L+LEA +GFLFVV+ + G V + ++++ + S+ + L
Sbjct: 125 AADG---TYKPSFLTDQELKHLILEAADGFLFVVSCESGRVVYVSDSLTPVLNQSQSDWL 181
Query: 175 GKSVYNLIHHGD 186
G S+Y+ +H D
Sbjct: 182 GSSLYDQLHPDD 193
>UNIPROTKB|Q8QGQ7 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0048511 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P27540 HOVERGEN:HBG107503 EMBL:AF246958
IPI:IPI00819869 RefSeq:NP_989464.1 UniGene:Gga.2818
ProteinModelPortal:Q8QGQ7 GeneID:373925 KEGG:gga:373925 CTD:56938
eggNOG:NOG288887 KO:K09099 NextBio:20813457 Uniprot:Q8QGQ7
Length = 622
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 48/159 (30%), Positives = 85/159 (53%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V ++++K +S
Sbjct: 101 EKRRRDKMNNLIEELSAMIPQCN------PMARKLDKLTVLRMAVQHLKSLKGSTSSYTE 154
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V+ KP+ + ++ L L+L A +GFLFVV + G + F +E++ + Y + ++
Sbjct: 155 VRY------KPSFLKDDELRQLILRAADGFLFVVGCNRGKILFVSESVCKILNYDQTSLI 208
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAG 213
G+S+++ +H D A+ L SS V+ G+ G
Sbjct: 209 GQSLFDYLHPKDVAKVKEQL--SSSDVSPREKLVDGKTG 245
>UNIPROTKB|F1NQL8 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 IPI:IPI00819869 EMBL:AADN02006684
Ensembl:ENSGALT00000037361 ArrayExpress:F1NQL8 Uniprot:F1NQL8
Length = 623
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 48/159 (30%), Positives = 85/159 (53%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V ++++K +S
Sbjct: 101 EKRRRDKMNNLIEELSAMIPQCN------PMARKLDKLTVLRMAVQHLKSLKGSTSSYTE 154
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V+ KP+ + ++ L L+L A +GFLFVV + G + F +E++ + Y + ++
Sbjct: 155 VRY------KPSFLKDDELRQLILRAADGFLFVVGCNRGKILFVSESVCKILNYDQTSLI 208
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAG 213
G+S+++ +H D A+ L SS V+ G+ G
Sbjct: 209 GQSLFDYLHPKDVAKVKEQL--SSSDVSPREKLVDGKTG 245
>UNIPROTKB|E1C1C5 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0045944 GO:GO:0005667 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:IPQCNPM EMBL:AADN02006684 IPI:IPI00598933
Ensembl:ENSGALT00000022820 ArrayExpress:E1C1C5 Uniprot:E1C1C5
Length = 624
Score = 168 (64.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 48/159 (30%), Positives = 85/159 (53%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V ++++K +S
Sbjct: 101 EKRRRDKMNNLIEELSAMIPQCN------PMARKLDKLTVLRMAVQHLKSLKGSTSSYTE 154
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
V+ KP+ + ++ L L+L A +GFLFVV + G + F +E++ + Y + ++
Sbjct: 155 VRY------KPSFLKDDELRQLILRAADGFLFVVGCNRGKILFVSESVCKILNYDQTSLI 208
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAG 213
G+S+++ +H D A+ L SS V+ G+ G
Sbjct: 209 GQSLFDYLHPKDVAKVKEQL--SSSDVSPREKLVDGKTG 245
>ZFIN|ZDB-GENE-000509-1 [details] [associations]
symbol:arntl1a "aryl hydrocarbon receptor nuclear
translocator-like 1a" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009648 "photoperiodism" evidence=IEP]
[GO:0007623 "circadian rhythm" evidence=IGI] [GO:0009416 "response
to light stimulus" evidence=IGI] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-1
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC GO:GO:0009648
EMBL:CR759966 EMBL:AF144689 EMBL:AF144690 IPI:IPI00490446
RefSeq:NP_571652.1 UniGene:Dr.75458 DIP:DIP-46453N STRING:Q9I879
Ensembl:ENSDART00000023959 Ensembl:ENSDART00000148660 GeneID:58098
KEGG:dre:58098 CTD:58098 InParanoid:Q9I879 NextBio:20892352
Uniprot:Q9I879
Length = 626
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 41/135 (30%), Positives = 79/135 (58%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 85 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 132
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
++ KP ++++ L L+L A +GFLFVV D G + F +E++ + Y++ +++
Sbjct: 133 TNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVYKILNYTQNDLI 192
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 193 GQSLFDYLHPKDIAK 207
>UNIPROTKB|F1N4Q7 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0000982 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0045944 GO:GO:0005667 GO:GO:0004871 GO:GO:0000982
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:IPQCNPM EMBL:DAAA02014003
IPI:IPI00837789 Ensembl:ENSBTAT00000043261 Uniprot:F1N4Q7
Length = 629
Score = 150 (57.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 50/185 (27%), Positives = 95/185 (51%)
Query: 4 LNEK-RRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQ 62
+ EK + +N + L+ + ++F+ S + K +E +Q EKRRR++
Sbjct: 55 MKEKVMEKLSQNPFTCLLSTRVEMSAFSCSRMEDGEQQVKIKSFREAHSQ--TEKRRRDK 112
Query: 63 ENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVS 122
NN I +L+ +I S +A K DK +L+ V +R++K TS G +
Sbjct: 113 MNNLIGKLSTMIPQCS------PMARKLDKLTVLRLAVQHLRSLKGM-TSC---YPG--N 160
Query: 123 SSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNL 181
+ +P+ I + L L+L+ EGFLFVV + G + F ++++ + Y + ++G+S+++
Sbjct: 161 NYRPSFIHDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSRILNYDQASLIGQSLFDF 220
Query: 182 IHHGD 186
+H D
Sbjct: 221 LHPKD 225
Score = 62 (26.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 26/105 (24%), Positives = 42/105 (40%)
Query: 164 SFIRYSRQEVLGKSVYNLIHHGDHARF---HNCLVPSSHQVNAWTSDSGGQAGKRPSLTA 220
+ + Y QE+LG S Y H DH+ H ++ S ++ + + G +L +
Sbjct: 384 AILGYLPQELLGTSCYEYFHQDDHSNLTDKHKAVLQSKEKIFTDSYKFRAKDGSFVTLKS 443
Query: 221 S----TPNRTFNIRLLISSTHLTAGLSRAGGENGQDDSGDVSSEG 261
T T + ++S + G S AG E SSEG
Sbjct: 444 QWFSFTNPWTKELEYIVSVNTVVLGHSDAG-ETSLLPCSSQSSEG 487
>UNIPROTKB|K7GQY6 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CU463875 Ensembl:ENSSSCT00000032666 Ensembl:ENSSSCT00000033780
Uniprot:K7GQY6
Length = 347
Score = 163 (62.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 44/148 (29%), Positives = 83/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 85 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 136
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 137 SHMKSLRGTGNTSTDGTY-------KPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 189
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 190 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 217
>MGI|MGI:88071 [details] [associations]
symbol:Arnt "aryl hydrocarbon receptor nuclear translocator"
species:10090 "Mus musculus" [GO:0000989 "transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001666
"response to hypoxia" evidence=ISO;IDA] [GO:0001892 "embryonic
placenta development" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IGI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004874 "aryl
hydrocarbon receptor activity" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IDA;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0009636 "response
to toxic substance" evidence=TAS] [GO:0010575 "positive regulation
vascular endothelial growth factor production" evidence=ISO]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=IMP]
[GO:0033235 "positive regulation of protein sumoylation"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IPI] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:2001141 "regulation of RNA biosynthetic process"
evidence=IPI] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:88071 GO:GO:0005737
GO:GO:0030154 EMBL:CH466620 GO:GO:0003677 GO:GO:0009636
GO:GO:0043565 GO:GO:0001666 GO:GO:0045944 GO:GO:0010575
GO:GO:0003700 GO:GO:0005667 GO:GO:0003705 GO:GO:0003713
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0033235 GO:GO:0004874 HOGENOM:HOG000234380 HOVERGEN:HBG000164
CTD:405 KO:K09097 OrthoDB:EOG4R7V9H OMA:AGQGSKF ChiTaRS:ARNT
GO:GO:0001892 GO:GO:0046886 GO:GO:0043619 EMBL:U10325 EMBL:U14333
EMBL:AK153355 EMBL:BC012870 IPI:IPI00627004 IPI:IPI00875488
PIR:A55448 PIR:A56241 RefSeq:NP_001032826.1 UniGene:Mm.250265
ProteinModelPortal:P53762 SMR:P53762 DIP:DIP-280N IntAct:P53762
STRING:P53762 PhosphoSite:P53762 PRIDE:P53762
Ensembl:ENSMUST00000102749 GeneID:11863 KEGG:mmu:11863
InParanoid:Q921F3 NextBio:279865 Bgee:P53762 CleanEx:MM_ARNT
Genevestigator:P53762 GermOnline:ENSMUSG00000015522 Uniprot:P53762
Length = 791
Score = 167 (63.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 48/169 (28%), Positives = 90/169 (53%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 85 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 136
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D S KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 137 SHMKSLRGTGNTSTDG-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 189
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD 207
++++ + + E G ++Y+ +H D + L S + + D
Sbjct: 190 SDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRVLD 238
>ZFIN|ZDB-GENE-030408-2 [details] [associations]
symbol:clock3 "clock homolog 3 (mouse)" species:7955
"Danio rerio" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009648
"photoperiodism" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009416 "response to light stimulus"
evidence=IGI] [GO:0007623 "circadian rhythm" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF00010 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-030408-2 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0009648 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 OrthoDB:EOG476JZV EMBL:BX901913 EMBL:BX548248
EMBL:CR926462 EMBL:BC162682 IPI:IPI00483024 UniGene:Dr.86747
STRING:B3DH92 Ensembl:ENSDART00000103119 Ensembl:ENSDART00000133959
Uniprot:B3DH92
Length = 820
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 43/159 (27%), Positives = 83/159 (52%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ +R K+
Sbjct: 27 VSRNKSEKKRRDQFNVLIKELGTMLPGNTR---------KMDKSTILQKSIDYLRKNKEN 77
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
S++ ++ KP ++NE L+LEAL+GF V+ DGY+ + +E++ S + +
Sbjct: 78 AAQSES---SDIKQDWKPPFLSNEEFSQLMLEALDGFFLVMLTDGYIIYISESVTSLLEH 134
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD 207
+++ +++ N + DH + L S + SD
Sbjct: 135 LPSDLMDQNLLNFLPVVDHGEVYKAL-SSQPDIENLNSD 172
>FB|FBgn0023094 [details] [associations]
symbol:cyc "cycle" species:7227 "Drosophila melanogaster"
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IPI] [GO:0046982 "protein heterodimerization
activity" evidence=NAS;IPI] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007623 "circadian rhythm"
evidence=NAS;TAS] [GO:0008062 "eclosion rhythm" evidence=NAS;TAS]
[GO:0045475 "locomotor rhythm" evidence=NAS;TAS] [GO:0048148
"behavioral response to cocaine" evidence=NAS;TAS] [GO:0045187
"regulation of circadian sleep/wake cycle, sleep" evidence=IMP;TAS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=NAS;TAS] [GO:0007622 "rhythmic behavior" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=NAS;TAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0032922 "circadian regulation of gene expression" evidence=IMP]
[GO:0042594 "response to starvation" evidence=IDA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 EMBL:AE014296 GO:GO:0003677
GO:GO:0045187 GO:GO:0045944 GO:GO:0042594 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0004871
GO:GO:0046982 GO:GO:0048148 GO:GO:0045475 GO:GO:0032922
SMART:SM00086 eggNOG:NOG293303 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 KO:K02296 GO:GO:0008062
EMBL:AF065473 EMBL:AF067206 EMBL:AF069998 EMBL:AY119284
EMBL:BT025197 RefSeq:NP_524168.2 UniGene:Dm.1004
ProteinModelPortal:O61734 SMR:O61734 IntAct:O61734
MINT:MINT-1328881 STRING:O61734 PRIDE:O61734
EnsemblMetazoa:FBtr0074924 GeneID:40162 KEGG:dme:Dmel_CG8727
CTD:40162 FlyBase:FBgn0023094 InParanoid:O61734 OMA:EQCPRER
OrthoDB:EOG46WWQT PhylomeDB:O61734 GenomeRNAi:40162 NextBio:817333
Bgee:O61734 GermOnline:CG8727 Uniprot:O61734
Length = 413
Score = 162 (62.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 41/132 (31%), Positives = 77/132 (58%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N YI EL+ +I FA + K DK +L+ V +R I+ S +
Sbjct: 39 EKRRRDKMNTYINELSSMIPMC-FA-----MQRKLDKLTVLRMAVQHLRGIR----GSGS 88
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ S +P+ ++++ L ++L+A EGFLFVV D G + + ++++ S + ++ ++L
Sbjct: 89 LHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLL 148
Query: 175 GKSVYNLIHHGD 186
G+S ++++H D
Sbjct: 149 GQSWFDVLHPKD 160
>UNIPROTKB|F8WAP6 [details] [associations]
symbol:ARNT "Aryl hydrocarbon receptor nuclear
translocator" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL355860 HGNC:HGNC:700
ChiTaRS:ARNT IPI:IPI00965109 ProteinModelPortal:F8WAP6 SMR:F8WAP6
Ensembl:ENST00000354396 UCSC:uc009wmc.2 ArrayExpress:F8WAP6
Bgee:F8WAP6 Uniprot:F8WAP6
Length = 787
Score = 166 (63.5 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 45/148 (30%), Positives = 84/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 85 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 136
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D S KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 137 SHMKSLRGTGNTSTDG-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 189
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 190 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 217
>UNIPROTKB|P27540 [details] [associations]
symbol:ARNT "Aryl hydrocarbon receptor nuclear
translocator" species:9606 "Homo sapiens" [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0001892 "embryonic
placenta development" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004874 "aryl hydrocarbon
receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0033235 "positive regulation of protein sumoylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0033554
"cellular response to stress" evidence=TAS] [GO:0061418 "regulation
of transcription from RNA polymerase II promoter in response to
hypoxia" evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0042789 "mRNA transcription from RNA polymerase II promoter"
evidence=IC] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0001666 "response to hypoxia" evidence=IDA]
[GO:0001938 "positive regulation of endothelial cell proliferation"
evidence=IC] [GO:0005634 "nucleus" evidence=IDA] [GO:0010575
"positive regulation vascular endothelial growth factor production"
evidence=IDA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IC]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IDA] [GO:0045648 "positive regulation of erythrocyte
differentiation" evidence=IC] [GO:0045821 "positive regulation of
glycolysis" evidence=IC] [GO:0046886 "positive regulation of
hormone biosynthetic process" evidence=IDA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
Reactome:REACT_120956 GO:GO:0005737 GO:GO:0045893 GO:GO:0005654
GO:GO:0030154 GO:GO:0001938 Pathway_Interaction_DB:hif1_tfpathway
GO:GO:0043565 GO:GO:0045944 GO:GO:0010575 GO:GO:0003700
GO:GO:0045821 GO:GO:0005667 GO:GO:0003713 GO:GO:0045648
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0033235 GO:GO:0004874
Pathway_Interaction_DB:vegfr1_2_pathway EMBL:CH471121 GO:GO:0030949
HOGENOM:HOG000234380 HOVERGEN:HBG000164 CTD:405 KO:K09097
OrthoDB:EOG4R7V9H EMBL:M69238 EMBL:Y18859 EMBL:AJ251863
EMBL:AJ404851 EMBL:AJ404852 EMBL:AJ404853 EMBL:AJ404854
EMBL:AK290177 EMBL:AK293027 EMBL:AL834279 EMBL:AY430083
EMBL:AL355860 IPI:IPI00218287 IPI:IPI00514749 IPI:IPI00922490
PIR:I59550 RefSeq:NP_001184254.1 RefSeq:NP_001659.1
RefSeq:NP_848514.1 UniGene:Hs.632446 PDB:1D7G PDB:1X0O PDB:2A24
PDB:2ARN PDB:2B02 PDB:2HV1 PDB:2K7S PDB:3F1N PDB:3F1O PDB:3F1P
PDB:3H7W PDB:3H82 PDB:4H6J PDBsum:1D7G PDBsum:1X0O PDBsum:2A24
PDBsum:2ARN PDBsum:2B02 PDBsum:2HV1 PDBsum:2K7S PDBsum:3F1N
PDBsum:3F1O PDBsum:3F1P PDBsum:3H7W PDBsum:3H82 PDBsum:4H6J
ProteinModelPortal:P27540 SMR:P27540 DIP:DIP-30886N IntAct:P27540
MINT:MINT-1196758 STRING:P27540 PhosphoSite:P27540 DMDM:114163
PaxDb:P27540 PRIDE:P27540 DNASU:405 Ensembl:ENST00000358595
Ensembl:ENST00000505755 Ensembl:ENST00000515192 GeneID:405
KEGG:hsa:405 UCSC:uc001evr.2 UCSC:uc001evs.2 UCSC:uc009wmb.2
GeneCards:GC01M150782 HGNC:HGNC:700 HPA:CAB004318 HPA:HPA001759
MIM:126110 neXtProt:NX_P27540 PharmGKB:PA24994 OMA:AGQGSKF
Pathway_Interaction_DB:hif1apathway ChEMBL:CHEMBL5618 ChiTaRS:ARNT
EvolutionaryTrace:P27540 GenomeRNAi:405 NextBio:1693
ArrayExpress:P27540 Bgee:P27540 CleanEx:HS_ARNT
Genevestigator:P27540 GermOnline:ENSG00000143437 GO:GO:0001892
GO:GO:0042789 GO:GO:0046886 GO:GO:0061418 GO:GO:0043619
Uniprot:P27540
Length = 789
Score = 166 (63.5 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 45/148 (30%), Positives = 84/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 85 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 136
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D S KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 137 SHMKSLRGTGNTSTDG-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 189
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 190 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 217
>ZFIN|ZDB-GENE-030408-3 [details] [associations]
symbol:npas2 "neuronal PAS domain protein 2"
species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA;IPI] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0009648
"photoperiodism" evidence=IEP] [GO:0007623 "circadian rhythm"
evidence=IGI] [GO:0009416 "response to light stimulus"
evidence=IGI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-030408-3 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0009648 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 KO:K02223 HSSP:Q99814 CTD:4862 OrthoDB:EOG444KJQ
OMA:GHPRKMD EMBL:CU464080 EMBL:BC163256 EMBL:AB087255
IPI:IPI00505783 RefSeq:NP_840084.1 UniGene:Dr.24959 STRING:Q8JIG3
Ensembl:ENSDART00000014806 GeneID:352934 KEGG:dre:352934
InParanoid:Q8JIG3 NextBio:20812676 Uniprot:Q8JIG3
Length = 845
Score = 172 (65.6 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 44/148 (29%), Positives = 81/148 (54%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL ++ M DK ILQ T++ ++ KQ+E ++
Sbjct: 50 SEKKRRDQFNVLIKELCTMLQGQGHPRKM-------DKSTILQRTIDFLQ--KQKEITAQ 100
Query: 115 AVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ EV KP+ ++NE L+LEAL+GFL + DG + + ++++ S I + ++
Sbjct: 101 T-ESCEVRQDWKPSFLSNEEFTQLMLEALDGFLIALTTDGNIIYVSDSVSSLIGHLPSDM 159
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQV 201
+ +++ N + +HA + L SSH +
Sbjct: 160 VDQNILNFLPEREHADVYKLL--SSHML 185
Score = 38 (18.4 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 187 HARFHNCLVPSSHQVNAWTSDSGGQ 211
H + +C+ SSH + +S + GQ
Sbjct: 599 HPKPQHCVSHSSHTLQPNSSSTQGQ 623
>RGD|2153 [details] [associations]
symbol:Arnt "aryl hydrocarbon receptor nuclear translocator"
species:10116 "Rattus norvegicus" [GO:0000989 "transcription factor
binding transcription factor activity" evidence=ISO] [GO:0001666
"response to hypoxia" evidence=IEP;ISO] [GO:0001892 "embryonic
placenta development" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004874 "aryl
hydrocarbon receptor activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009636 "response to toxic substance"
evidence=NAS] [GO:0010575 "positive regulation vascular endothelial
growth factor production" evidence=ISO] [GO:0017162 "aryl hydrocarbon
receptor binding" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0030522 "intracellular receptor mediated signaling
pathway" evidence=ISO] [GO:0033235 "positive regulation of protein
sumoylation" evidence=ISO] [GO:0043619 "regulation of transcription
from RNA polymerase II promoter in response to oxidative stress"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:2001141 "regulation of RNA biosynthetic
process" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:2153 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0009636 GO:GO:0043565 GO:GO:0001666 GO:GO:0045944 GO:GO:0010575
GO:GO:0005667 GO:GO:0003705 GO:GO:0003713 GO:GO:0046982 SMART:SM00086
TIGRFAMs:TIGR00229 eggNOG:NOG293303 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0033235 GO:GO:0004874 HOVERGEN:HBG000164
CTD:405 KO:K09097 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
EMBL:U61184 EMBL:U08986 IPI:IPI00195864 PIR:S58376 RefSeq:NP_036912.1
UniGene:Rn.10520 ProteinModelPortal:P41739 SMR:P41739 IntAct:P41739
STRING:P41739 PhosphoSite:P41739 PRIDE:P41739 GeneID:25242
KEGG:rno:25242 UCSC:RGD:2153 InParanoid:P41739 NextBio:605831
ArrayExpress:P41739 Genevestigator:P41739
GermOnline:ENSRNOG00000031174 Uniprot:P41739
Length = 800
Score = 166 (63.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 45/148 (30%), Positives = 84/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 85 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 136
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D S KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 137 SHMKSLRGTGNTSTDG-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 189
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 190 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 217
>UNIPROTKB|F1LMF9 [details] [associations]
symbol:Arnt "Aryl hydrocarbon receptor nuclear
translocator" species:10116 "Rattus norvegicus" [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0004874 "aryl hydrocarbon receptor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0010575
"positive regulation vascular endothelial growth factor production"
evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0033235 "positive regulation of protein sumoylation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046886
"positive regulation of hormone biosynthetic process" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:2153
GO:GO:0005737 GO:GO:0030154 GO:GO:0043565 GO:GO:0001666
GO:GO:0045944 GO:GO:0010575 GO:GO:0005667 GO:GO:0003705
GO:GO:0003713 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0033235 GO:GO:0004874 GO:GO:0001892 GO:GO:0046886
GO:GO:0043619 IPI:IPI00947650 Ensembl:ENSRNOT00000064442
ArrayExpress:F1LMF9 Uniprot:F1LMF9
Length = 801
Score = 166 (63.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 45/148 (30%), Positives = 84/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 85 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 136
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D S KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 137 SHMKSLRGTGNTSTDG-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 189
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 190 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 217
>UNIPROTKB|Q98SN3 [details] [associations]
symbol:ARNT "Aryl hydrocarbon receptor nuclear
translocator" species:9031 "Gallus gallus" [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0001666 "response
to hypoxia" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0004874 "aryl hydrocarbon receptor
activity" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0043619 "regulation of transcription
from RNA polymerase II promoter in response to oxidative stress"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046886
"positive regulation of hormone biosynthetic process" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0043565 GO:GO:0001666 GO:GO:0045944 GO:GO:0010575
GO:GO:0005667 GO:GO:0003705 GO:GO:0003713 SMART:SM00086
TIGRFAMs:TIGR00229 eggNOG:NOG293303 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0033235 GO:GO:0004874
HOGENOM:HOG000234380 HOVERGEN:HBG000164 CTD:405 KO:K09097
OMA:AGQGSKF GO:GO:0046886 GO:GO:0043619 HSSP:P22415
EMBL:AADN02010491 EMBL:AADN02010492 EMBL:AADN02010493 EMBL:AF348088
IPI:IPI00581095 PIR:JC7635 RefSeq:NP_989531.1 UniGene:Gga.8458
ProteinModelPortal:Q98SN3 SMR:Q98SN3 STRING:Q98SN3
Ensembl:ENSGALT00000001095 GeneID:374026 KEGG:gga:374026
InParanoid:Q98SN3 NextBio:20813553 Uniprot:Q98SN3
Length = 805
Score = 167 (63.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 47/167 (28%), Positives = 89/167 (53%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 85 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 136
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 137 SHMKSLRGTGNTSTDGTY-------KPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 189
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWT 205
++++ + + E G ++Y+ +H D + L S + + T
Sbjct: 190 SDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSENALTEGT 236
Score = 42 (19.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 197 SSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIR 230
S H A S S AG RP+ A ++ R
Sbjct: 650 SRHASPAQVSGSSWAAGTRPAFAAQVASQAVKTR 683
>UNIPROTKB|E9PPV4 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0003700 GO:GO:0005667
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884 EMBL:AC022878
HGNC:HGNC:701 IPI:IPI00978797 ProteinModelPortal:E9PPV4 SMR:E9PPV4
Ensembl:ENST00000530357 ArrayExpress:E9PPV4 Bgee:E9PPV4
Uniprot:E9PPV4
Length = 141
Score = 140 (54.3 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 38/116 (32%), Positives = 66/116 (56%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N++I+ELA L+ + +MS K DK +L+ V ++ ++ A
Sbjct: 38 EKRRRDKMNSFIDELASLVPTCN---AMSR---KLDKLTVLRMAVQHMKTLR------GA 85
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSR 170
++ KPT ++++ L L+L A +GFLFVV D G + F +E++ + YS+
Sbjct: 86 TNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQ 141
>UNIPROTKB|E9PTS2 [details] [associations]
symbol:Arnt "Aryl hydrocarbon receptor nuclear
translocator" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:2153
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00476252 Ensembl:ENSRNOT00000044738 ArrayExpress:E9PTS2
Uniprot:E9PTS2
Length = 785
Score = 165 (63.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 42/133 (31%), Positives = 77/133 (57%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 83 ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSLRGTGNTSTD 136
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
S KP+ +T++ L L+LEA +GFLF+V+ + G V + ++++ + + E
Sbjct: 137 G-------SYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEW 189
Query: 174 LGKSVYNLIHHGD 186
G ++Y+ +H D
Sbjct: 190 FGSTLYDQVHPDD 202
>UNIPROTKB|J9P3T5 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03015178
Ensembl:ENSCAFT00000046810 Uniprot:J9P3T5
Length = 593
Score = 163 (62.4 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 50/173 (28%), Positives = 94/173 (54%)
Query: 18 EELAELISAASFAESMSSLAVKPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAA 77
E++ E +S F +S+ ++ + +E +Q EKRRR++ NN IEEL+ +I
Sbjct: 39 EKMVEKLSKNPFTYLLST-RIEISASSGSREAHSQ--TEKRRRDKMNNLIEELSAMIPQC 95
Query: 78 SFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQGEVSSSKPTVITNEVLGPL 137
+ + K DK +L+ V ++++K TSS A G+ + +P+ I + L L
Sbjct: 96 N------PVPRKLDKLTVLRMAVQHLKSLKGM-TSSYA---GD--NYRPSFIQDNELRHL 143
Query: 138 LLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHAR 189
+L+ EGFLFVV + G + F ++++ + Y + + G+S+++ +H D A+
Sbjct: 144 ILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLTGRSLFDFLHPKDVAK 196
>ZFIN|ZDB-GENE-020829-1 [details] [associations]
symbol:sim1a "single-minded homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IGI;IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0021979 "hypothalamus
cell differentiation" evidence=IMP] [GO:0021536 "diencephalon
development" evidence=IMP] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-020829-1
GO:GO:0005634 GO:GO:0003677 GO:GO:0071542 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 HSSP:Q99814 eggNOG:NOG310284 GO:GO:0021979
EMBL:AY028626 IPI:IPI00494277 RefSeq:NP_835740.1 UniGene:Dr.25265
ProteinModelPortal:Q98SJ5 STRING:Q98SJ5 GeneID:260351
KEGG:dre:260351 CTD:260351 HOVERGEN:HBG003936 KO:K09100
OrthoDB:EOG4QC14V NextBio:20804722 ArrayExpress:Q98SJ5
Uniprot:Q98SJ5
Length = 745
Score = 164 (62.8 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 47/145 (32%), Positives = 74/145 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S S S DK +I++ T + ++ I E ++
Sbjct: 10 RTRREKENSEFYELAKLLPLPSAITSQS------DKASIIRLTTSYLKMRIVFPEGLGES 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G VS + LG LL+ L+GF+FVV PDG + + +E + S++E+ G
Sbjct: 64 --WGHVSRTTSLENVGRELGSHLLQTLDGFIFVVAPDGKILYISETASVHLGLSQEELTG 121
Query: 176 KSVYNLIHHGDHARFHNCLVPSSHQ 200
S+Y IH DH L ++HQ
Sbjct: 122 NSIYEYIHPADHDEMTAVL--TAHQ 144
>UNIPROTKB|F6V057 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 Ensembl:ENSCAFT00000019492
EMBL:AAEX03011051 Uniprot:F6V057
Length = 781
Score = 163 (62.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 44/148 (29%), Positives = 83/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 76 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 127
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 128 SHMKSLRGTGNTSTDGTY-------KPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 180
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 181 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 208
>UNIPROTKB|F1SS94 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:AGQGSKF EMBL:CU463875
Ensembl:ENSSSCT00000007282 Uniprot:F1SS94
Length = 781
Score = 163 (62.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 44/148 (29%), Positives = 83/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 76 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 127
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 128 SHMKSLRGTGNTSTDGTY-------KPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 180
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 181 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 208
>UNIPROTKB|F1MYI1 [details] [associations]
symbol:ARNT "Aryl hydrocarbon receptor nuclear
translocator" species:9913 "Bos taurus" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0046886 "positive
regulation of hormone biosynthetic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043619 "regulation of
transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0010575 "positive regulation vascular endothelial
growth factor production" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004874 "aryl hydrocarbon receptor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0030154 GO:GO:0043565 GO:GO:0001666 GO:GO:0045944
GO:GO:0010575 GO:GO:0005667 GO:GO:0003705 GO:GO:0003713
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0033235 GO:GO:0004874
IPI:IPI00701584 OMA:AGQGSKF GO:GO:0001892 GO:GO:0046886
GO:GO:0043619 EMBL:DAAA02007256 Ensembl:ENSBTAT00000028023
ArrayExpress:F1MYI1 Uniprot:F1MYI1
Length = 782
Score = 163 (62.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 44/148 (29%), Positives = 83/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 77 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 128
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 129 SHMKSLRGTGNTSTDGTY-------KPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 181
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 182 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 209
>UNIPROTKB|Q9BE97 [details] [associations]
symbol:ARNT "Aryl hydrocarbon receptor nuclear
translocator" species:9913 "Bos taurus" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000234380 HOVERGEN:HBG000164 HSSP:P27540 EMBL:AB053954
IPI:IPI00701584 RefSeq:NP_776418.1 UniGene:Bt.87256
ProteinModelPortal:Q9BE97 SMR:Q9BE97 STRING:Q9BE97 PRIDE:Q9BE97
GeneID:281010 KEGG:bta:281010 CTD:405 InParanoid:Q9BE97 KO:K09097
OrthoDB:EOG4R7V9H NextBio:20805105 Uniprot:Q9BE97
Length = 790
Score = 163 (62.4 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 44/148 (29%), Positives = 83/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 85 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 136
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 137 SHMKSLRGTGNTSTDGTY-------KPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 189
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 190 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 217
>UNIPROTKB|K7GNG1 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CU463875 Ensembl:ENSSSCT00000034834 Uniprot:K7GNG1
Length = 790
Score = 163 (62.4 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 44/148 (29%), Positives = 83/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 85 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 136
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 137 SHMKSLRGTGNTSTDGTY-------KPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 189
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 190 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 217
>UNIPROTKB|E2QT96 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
Ensembl:ENSCAFT00000019492 Uniprot:E2QT96
Length = 791
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 44/148 (29%), Positives = 83/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 85 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 136
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 137 SHMKSLRGTGNTSTDGTY-------KPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 189
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 190 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 217
>UNIPROTKB|J9P204 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:AGQGSKF EMBL:AAEX03011051
Ensembl:ENSCAFT00000047223 Uniprot:J9P204
Length = 791
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 44/148 (29%), Positives = 83/148 (56%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 85 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 136
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 137 SHMKSLRGTGNTSTDGTY-------KPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 189
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGD 186
++++ + + E G ++Y+ +H D
Sbjct: 190 SDSVTPVLNQPQSEWFGSTLYDQVHPDD 217
>UNIPROTKB|F1PZY3 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0000982 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0045944 GO:GO:0005667 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:IPQCNPM EMBL:AAEX03015178 Ensembl:ENSCAFT00000017664
Uniprot:F1PZY3
Length = 624
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 46/145 (31%), Positives = 82/145 (56%)
Query: 46 LQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRN 105
L+E +Q EKRRR++ NN IEEL+ +I + + K DK +L+ V +++
Sbjct: 97 LREAHSQ--TEKRRRDKMNNLIEELSAMIPQCN------PVPRKLDKLTVLRMAVQHLKS 148
Query: 106 IKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKS 164
+K TSS A G+ + +P+ I + L L+L+ EGFLFVV + G + F ++++
Sbjct: 149 LKGM-TSSYA---GD--NYRPSFIQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSK 202
Query: 165 FIRYSRQEVLGKSVYNLIHHGDHAR 189
+ Y + + G+S+++ +H D A+
Sbjct: 203 ILNYDQASLTGRSLFDFLHPKDVAK 227
>MGI|MGI:98306 [details] [associations]
symbol:Sim1 "single-minded homolog 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
PROSITE:PS51302 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:98306 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 eggNOG:NOG310284
HOGENOM:HOG000236298 HOVERGEN:HBG003936 KO:K09100 OrthoDB:EOG4QC14V
CTD:6492 OMA:NSMPHIT EMBL:U40575 EMBL:AF038857 EMBL:AF038853
EMBL:AF038854 EMBL:AF038856 EMBL:AF044913 EMBL:AF038855 EMBL:D79209
EMBL:AB013491 IPI:IPI00117015 RefSeq:NP_035506.2 UniGene:Mm.4774
ProteinModelPortal:Q61045 SMR:Q61045 IntAct:Q61045 STRING:Q61045
PhosphoSite:Q61045 PRIDE:Q61045 DNASU:20464
Ensembl:ENSMUST00000020071 GeneID:20464 KEGG:mmu:20464
UCSC:uc007fal.1 InParanoid:Q61045 NextBio:298559 Bgee:Q61045
CleanEx:MM_SIM1 Genevestigator:Q61045 GermOnline:ENSMUSG00000019913
Uniprot:Q61045
Length = 765
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHTSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDHARFHNCLVPSSHQ 200
S+Y IH DH L ++HQ
Sbjct: 122 NSIYEYIHPADHDEMTAVL--TAHQ 144
>RGD|1309949 [details] [associations]
symbol:Sim1 "single-minded homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:1309949
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 EMBL:CH474025 KO:K09100
OrthoDB:EOG4QC14V CTD:6492 OMA:NSMPHIT IPI:IPI00361456
RefSeq:NP_001101111.1 UniGene:Rn.165946 Ensembl:ENSRNOT00000057010
GeneID:309888 KEGG:rno:309888 UCSC:RGD:1309949 NextBio:661438
Uniprot:D3ZMU8
Length = 765
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHTSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDHARFHNCLVPSSHQ 200
S+Y IH DH L ++HQ
Sbjct: 122 NSIYEYIHPADHDEMTAVL--TAHQ 144
>ZFIN|ZDB-GENE-990630-14 [details] [associations]
symbol:clock "clock" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IDA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;IMP] [GO:0046982
"protein heterodimerization activity" evidence=NAS] [GO:0009648
"photoperiodism" evidence=IEP;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IGI;IMP]
[GO:0009416 "response to light stimulus" evidence=IGI;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009266 "response to temperature stimulus" evidence=IDA]
[GO:0032922 "circadian regulation of gene expression" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-990630-14 GO:GO:0005737 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0009266 GO:GO:0009648 CTD:9575 HOGENOM:HOG000234382
HOVERGEN:HBG050997 KO:K02223 HSSP:Q99814 EMBL:AF133306
IPI:IPI00503983 RefSeq:NP_571032.1 UniGene:Dr.81289
ProteinModelPortal:Q9W6J4 DIP:DIP-46451N STRING:Q9W6J4 GeneID:30140
KEGG:dre:30140 InParanoid:Q9W6J4 NextBio:20806615
ArrayExpress:Q9W6J4 Uniprot:Q9W6J4
Length = 893
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 42/157 (26%), Positives = 86/157 (54%)
Query: 50 VNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ 109
V++ +EK+RR+Q N I+EL ++ + K DK ILQ++++ +R K +
Sbjct: 28 VSRNRSEKKRRDQFNVLIKELGTMLPGNTR---------KMDKSTILQKSIDFLR--KHK 76
Query: 110 ETSSDAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
E ++ + + E+ KP ++NE L+LEAL+GF + DG + + +E++ S + +
Sbjct: 77 EIAAQS-ESSEIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMTDGNIIYVSESVTSLLEH 135
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWT 205
+++ +++ N + G+H+ + L S+H + T
Sbjct: 136 LPSDLVDQNLLNFLPLGEHSEVYKAL--STHMLEGET 170
>UNIPROTKB|F1NGR0 [details] [associations]
symbol:F1NGR0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AADN02013650 EMBL:AADN02013651 IPI:IPI00577457
Ensembl:ENSGALT00000014751 OMA:GHPRKMD Uniprot:F1NGR0
Length = 675
Score = 160 (61.4 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 38/143 (26%), Positives = 77/143 (53%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL ++ +K DK ILQ T++ ++ KQ+E +
Sbjct: 18 SEKKRRDQFNVLIKELCTMLQGHGHP-------LKMDKSTILQRTIDFLQ--KQKEEITA 68
Query: 115 AVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E+ KP+ ++NE L+LEAL+GFL + DG + + ++++ S + + ++
Sbjct: 69 QTEACEIRQDWKPSFLSNEEFTQLMLEALDGFLIALTTDGIIIYVSDSVSSLLGHLPSDL 128
Query: 174 LGKSVYNLIHHGDHARFHNCLVP 196
+ +++ N + + + + L P
Sbjct: 129 VDQNILNFLPEREQSEVYKLLSP 151
>UNIPROTKB|E1C5G3 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001657 "ureteric bud development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 EMBL:AADN02002234
KO:K09100 CTD:6492 OMA:NSMPHIT EMBL:AADN02002235 EMBL:AADN02002236
EMBL:AADN02002237 IPI:IPI00821218 RefSeq:XP_419817.2
UniGene:Gga.31324 Ensembl:ENSGALT00000024939 GeneID:396129
KEGG:gga:396129 NextBio:20816186 Uniprot:E1C5G3
Length = 766
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDHARFHNCLVPSSHQ 200
S+Y IH DH L ++HQ
Sbjct: 122 NSIYEYIHPADHDEMTAVL--TAHQ 144
>UNIPROTKB|F1N178 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 OMA:NSMPHIT
EMBL:DAAA02026200 EMBL:DAAA02026201 IPI:IPI00999630
UniGene:Bt.106531 Ensembl:ENSBTAT00000002960 NextBio:20877091
Uniprot:F1N178
Length = 766
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDHARFHNCLVPSSHQ 200
S+Y IH DH L ++HQ
Sbjct: 122 NSIYEYIHPADHDEMTAVL--TAHQ 144
>UNIPROTKB|E2QWV9 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 KO:K09100 CTD:6492
OMA:NSMPHIT EMBL:AAEX03008562 RefSeq:XP_539058.2
ProteinModelPortal:E2QWV9 Ensembl:ENSCAFT00000005680 GeneID:481937
KEGG:cfa:481937 NextBio:20856645 Uniprot:E2QWV9
Length = 766
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDHARFHNCLVPSSHQ 200
S+Y IH DH L ++HQ
Sbjct: 122 NSIYEYIHPADHDEMTAVL--TAHQ 144
>UNIPROTKB|P81133 [details] [associations]
symbol:SIM1 "Single-minded homolog 1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0001657
EMBL:Z86062 eggNOG:NOG310284 HOGENOM:HOG000236298
HOVERGEN:HBG003936 KO:K09100 OrthoDB:EOG4QC14V EMBL:U70212
EMBL:AL121948 IPI:IPI00292234 RefSeq:NP_005059.2 UniGene:Hs.520293
ProteinModelPortal:P81133 SMR:P81133 STRING:P81133
PhosphoSite:P81133 DMDM:109940166 PRIDE:P81133 DNASU:6492
Ensembl:ENST00000262901 Ensembl:ENST00000369208 GeneID:6492
KEGG:hsa:6492 UCSC:uc003pqj.4 CTD:6492 GeneCards:GC06M100882
HGNC:HGNC:10882 HPA:HPA002084 HPA:HPA024385 MIM:603128
neXtProt:NX_P81133 Orphanet:171829 PharmGKB:PA35782
InParanoid:P81133 OMA:NSMPHIT PhylomeDB:P81133 ChiTaRS:SIM1
GenomeRNAi:6492 NextBio:25231 Bgee:P81133 CleanEx:HS_SIM1
Genevestigator:P81133 GermOnline:ENSG00000112246 Uniprot:P81133
Length = 766
Score = 160 (61.4 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDHARFHNCLVPSSHQ 200
S+Y IH DH L ++HQ
Sbjct: 122 NSIYEYIHPADHDEMTAVL--TAHQ 144
>UNIPROTKB|F1RYR5 [details] [associations]
symbol:SIM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0001657 OMA:NSMPHIT
EMBL:CU024902 Ensembl:ENSSSCT00000004814 Uniprot:F1RYR5
Length = 767
Score = 160 (61.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
+ RRE+EN+ ELA+L+ S ++ + DK +I++ T + ++ + E +A
Sbjct: 10 RTRREKENSEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRVVFPEGLGEA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G S + P LG LL+ L+GF+FVV PDG + + +E + S+ E+ G
Sbjct: 64 --WGHSSRTSPLDNVGRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDHARFHNCLVPSSHQ 200
S+Y IH DH L ++HQ
Sbjct: 122 NSIYEYIHPADHDEMTAVL--TAHQ 144
>UNIPROTKB|H0Y5R1 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC068794
EMBL:AC092829 HGNC:HGNC:18984 Ensembl:ENST00000457040
Uniprot:H0Y5R1
Length = 588
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 42/135 (31%), Positives = 75/135 (55%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 68 EKRRRDKMNNLIEELSAMIPQCN------PMARKLDKLTVLRMAVQHLRSLKGLTNS--- 118
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 119 -YVG--SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 175
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 176 GQSLFDFLHPKDVAK 190
>UNIPROTKB|H9L0U2 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AADN02010491 EMBL:AADN02010492
EMBL:AADN02010493 Ensembl:ENSGALT00000029129 Uniprot:H9L0U2
Length = 788
Score = 165 (63.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 46/161 (28%), Positives = 87/161 (54%)
Query: 41 DKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETV 100
DK + +E ++ E+RRR + YI EL++++ S +LA KPDK IL+ V
Sbjct: 89 DKERLARENHSEI--ERRRRNKMTAYITELSDMVPTCS------ALARKPDKLTILRMAV 140
Query: 101 NQIRNIKQQ-ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFC 158
+ +++++ TS+D KP+ +T++ L L+LEA +GFLF+V+ + G V +
Sbjct: 141 SHMKSLRGTGNTSTDGTY-------KPSFLTDQELKHLILEAADGFLFIVSCETGRVVYV 193
Query: 159 TENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
++++ + + E G ++Y+ +H D + L S +
Sbjct: 194 SDSVTPVLNQPQSEWFGSTLYDQVHPDDVGKLREQLSTSEN 234
Score = 38 (18.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 197 SSHQVNAWTSDSGGQAGKRPSLTA 220
S H A S S AG RP+ A
Sbjct: 632 SRHASPAQVSGSSWAAGTRPAFAA 655
>UNIPROTKB|Q8WYA1 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA;NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0009649 "entrainment of circadian clock"
evidence=NAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007623 "circadian
rhythm" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0009649 GO:GO:0007623 GO:GO:0045944
GO:GO:0005667 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG107503 CTD:56938 eggNOG:NOG288887 KO:K09099
EMBL:AB039921 EMBL:AF256215 EMBL:AF231338 EMBL:AF231339
EMBL:AF246960 EMBL:AF246961 EMBL:AF246962 EMBL:AF246963
EMBL:AK296706 EMBL:AC068794 EMBL:AC092829 EMBL:BC000172
EMBL:BC125061 EMBL:BC125062 IPI:IPI00142781 IPI:IPI00163662
IPI:IPI00465306 IPI:IPI00788724 IPI:IPI00789255 IPI:IPI00795339
IPI:IPI00827866 IPI:IPI00827897 IPI:IPI01009213
RefSeq:NP_001234931.1 RefSeq:NP_001234932.1 RefSeq:NP_001234933.1
RefSeq:NP_001234934.1 RefSeq:NP_064568.3 UniGene:Hs.434269
UniGene:Hs.445447 PDB:2KDK PDBsum:2KDK ProteinModelPortal:Q8WYA1
SMR:Q8WYA1 IntAct:Q8WYA1 STRING:Q8WYA1 PhosphoSite:Q8WYA1
DMDM:124007121 PaxDb:Q8WYA1 PRIDE:Q8WYA1 Ensembl:ENST00000261178
Ensembl:ENST00000266503 Ensembl:ENST00000311001
Ensembl:ENST00000395901 Ensembl:ENST00000542388
Ensembl:ENST00000544915 Ensembl:ENST00000546179 GeneID:56938
KEGG:hsa:56938 UCSC:uc001rht.2 UCSC:uc001rhu.2 UCSC:uc001rhv.2
UCSC:uc001rhw.3 UCSC:uc009zji.2 GeneCards:GC12P027485
H-InvDB:HIX0037110 HGNC:HGNC:18984 MIM:614517 neXtProt:NX_Q8WYA1
PharmGKB:PA134896555 InParanoid:Q8WYA1 OMA:IPQCNPM PhylomeDB:Q8WYA1
GenomeRNAi:56938 NextBio:62501 ArrayExpress:Q8WYA1 Bgee:Q8WYA1
CleanEx:HS_ARNTL2 Genevestigator:Q8WYA1 Uniprot:Q8WYA1
Length = 636
Score = 158 (60.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 42/135 (31%), Positives = 75/135 (55%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ NN IEEL+ +I + +A K DK +L+ V +R++K S
Sbjct: 116 EKRRRDKMNNLIEELSAMIPQCN------PMARKLDKLTVLRMAVQHLRSLKGLTNS--- 166
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G S+ +P+ + + L L+L+ EGFLFVV + G + F ++++ + Y + +
Sbjct: 167 -YVG--SNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLT 223
Query: 175 GKSVYNLIHHGDHAR 189
G+S+++ +H D A+
Sbjct: 224 GQSLFDFLHPKDVAK 238
>MGI|MGI:2684845 [details] [associations]
symbol:Arntl2 "aryl hydrocarbon receptor nuclear
translocator-like 2" species:10090 "Mus musculus" [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:2684845 GO:GO:0005737
GO:GO:0003677 GO:GO:0007623 GO:GO:0045944 GO:GO:0005667
GO:GO:0004871 GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG107503 CTD:56938
eggNOG:NOG288887 KO:K09099 OMA:IPQCNPM EMBL:AY005163 EMBL:AY014836
EMBL:BC108965 EMBL:BC108966 IPI:IPI00129201 IPI:IPI00828642
RefSeq:NP_758513.1 UniGene:Mm.333500 UniGene:Mm.442075
ProteinModelPortal:Q2VPD4 SMR:Q2VPD4 STRING:Q2VPD4
PhosphoSite:Q2VPD4 PRIDE:Q2VPD4 Ensembl:ENSMUST00000080530
Ensembl:ENSMUST00000111639 Ensembl:ENSMUST00000129788 GeneID:272322
KEGG:mmu:272322 UCSC:uc009esj.1 InParanoid:Q2VPD4 OrthoDB:EOG4DFPNB
NextBio:393555 Bgee:Q2VPD4 Genevestigator:Q2VPD4 Uniprot:Q2VPD4
Length = 579
Score = 157 (60.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 51/183 (27%), Positives = 97/183 (53%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N+ I++L+ +I A K DK ++L+ V +R+++
Sbjct: 57 EKRRRDKMNHLIQKLSSMIPPHI------PTAHKLDKLSVLRRAVQYLRSLR----GMTE 106
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
+ GE +SKP+ I ++ L L+L+A EGFLFVV + G + + ++++ +RY + ++
Sbjct: 107 LYLGE--NSKPSFIQDKELSHLILKAAEGFLFVVGCERGRIFYVSKSVSKTLRYDQASLI 164
Query: 175 GKSVYNLIHHGDHARFHNCLV----PSSHQVNAWTSD--SGGQAGKRPSLTASTPNRTFN 228
G+++++ +H D A+ L P ++ TS S G RP + + + R+F
Sbjct: 165 GQNLFDFLHPKDVAKVKEQLSCDGSPREKPIDTKTSQVYSHPYTG-RPRMHSGS-RRSFF 222
Query: 229 IRL 231
R+
Sbjct: 223 FRM 225
>UNIPROTKB|F1SG81 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0000982 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0045944 GO:GO:0005667 GO:GO:0004871 GO:GO:0000982
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:IPQCNPM EMBL:CU633729
Ensembl:ENSSSCT00000000594 Uniprot:F1SG81
Length = 489
Score = 155 (59.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 44/145 (30%), Positives = 78/145 (53%)
Query: 46 LQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRN 105
L+E +Q EKRRR++ NN IE L+ +I +A K DK +L+ V +R+
Sbjct: 1 LREAHSQ--TEKRRRDKMNNLIETLSAMIPQCH------PVARKLDKLTVLRMAVQHLRS 52
Query: 106 IKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKS 164
+K S G ++ +P+ I + L L+L+ EGFLFVV + G + F ++++
Sbjct: 53 LKGMANS----YMG--NNCRPSFIQDNELRHLILKTAEGFLFVVGCERGKIIFISKSVSK 106
Query: 165 FIRYSRQEVLGKSVYNLIHHGDHAR 189
+ Y + + G+S+++ +H D A+
Sbjct: 107 ILNYDQASLTGQSLFDFLHPKDVAK 131
>UNIPROTKB|F1NWS4 [details] [associations]
symbol:LOC100859347 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 OMA:SEGLIFY EMBL:AADN02034423
IPI:IPI00587681 Ensembl:ENSGALT00000006888 ArrayExpress:F1NWS4
Uniprot:F1NWS4
Length = 588
Score = 156 (60.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 68/265 (25%), Positives = 112/265 (42%)
Query: 57 KRRREQENNYIEELAELIS-AASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
KR RE+ N +E LA L+ A + L++ A L+ + + ++
Sbjct: 28 KRHRERLNRELERLAALLPFPEEVAAGLDKLSILRLSAAFLR--AKSFFRVALKNHGAEG 85
Query: 116 VQQGEVSSSKPTVITNEVL-GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
++G S+P + T V G LLL+AL GF+ VV +G + + + I+ ++ + + +V+
Sbjct: 86 AERGGDHDSRPALGTAAVPEGELLLQALNGFVLVVTSEGLIFYSSHTIQDYLGFHQTDVM 145
Query: 175 GKSVYNLIHHGDHARF----HNCLVPSSHQVNAWTSDSGGQAGKRPSL----TASTPNRT 226
+S++ LIH DH F H L P H S S RP +S R+
Sbjct: 146 HQSIFKLIHTEDHQEFRRNLHWALNPP-HTPEGMKSLSSPAVAYRPDQLPLENSSFLERS 204
Query: 227 F--NIRLLI--SSTHLTAGLS-RAGGENGQDDSGDVSSEGGP--CLMCVARRI-PPTDKQ 278
F R L+ SS L L R +GQ+ + S P L ++ + PP+ +
Sbjct: 205 FVCRFRCLLDNSSGFLALNLQGRLRFLHGQNKRSEDGSALPPQLALFAISTPLQPPSILE 264
Query: 279 LSAPIEQFTMKLDRSGTIIGMDTSG 303
+ F K T + D G
Sbjct: 265 IRTKNMIFRTKHKLDFTPLACDAKG 289
>ZFIN|ZDB-GENE-001207-3 [details] [associations]
symbol:arnt2 "aryl hydrocarbon receptor nuclear
translocator 2" species:7955 "Danio rerio" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA;IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0048798 "swim bladder inflation" evidence=IMP]
[GO:0021591 "ventricular system development" evidence=IMP]
[GO:0072576 "liver morphogenesis" evidence=IMP] [GO:0003208
"cardiac ventricle morphogenesis" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021979 "hypothalamus cell differentiation"
evidence=IMP] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IMP] [GO:0021536 "diencephalon development" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-001207-3 GO:GO:0005737 GO:GO:0045893 GO:GO:0003677
GO:GO:0071542 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0016337 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0021591 GO:GO:0003208 GO:GO:0072576 GO:GO:0021979
EMBL:BX936312 EMBL:CABZ01029550 EMBL:CABZ01029551 EMBL:CABZ01029561
EMBL:CABZ01029562 EMBL:CABZ01029563 EMBL:CABZ01029564 EMBL:CU652843
EMBL:CU695017 EMBL:FP017235 EMBL:FP236184 IPI:IPI00504497
Ensembl:ENSDART00000129575 ArrayExpress:F1QVH4 Bgee:F1QVH4
GO:GO:0048798 Uniprot:F1QVH4
Length = 738
Score = 161 (61.7 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 43/148 (29%), Positives = 79/148 (53%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQ-ETSSD 114
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ TS+D
Sbjct: 87 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNTSTD 140
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEV 173
KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + + E
Sbjct: 141 GAY-------KPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEW 193
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQV 201
G +++ +H D + L S + +
Sbjct: 194 FGSTLFEQVHPDDVDKLREQLSTSENSM 221
Score = 39 (18.8 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 197 SSHQVNAWTSDSGGQAGKRPS 217
++ V+ +S SGGQ RPS
Sbjct: 655 TAFDVSGESSQSGGQFQGRPS 675
>UNIPROTKB|E1BS65 [details] [associations]
symbol:ARNT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AADN02041540 EMBL:AADN02041541
EMBL:AADN02041542 EMBL:AADN02041543 IPI:IPI00575824
Ensembl:ENSGALT00000010398 ArrayExpress:E1BS65 Uniprot:E1BS65
Length = 704
Score = 159 (61.0 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 43/147 (29%), Positives = 77/147 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 60 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKST- 112
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G + KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 113 --DG---AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 167
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
G ++Y +H D + L S + +
Sbjct: 168 GSTLYEQVHPDDVEKLREQLCTSENSM 194
Score = 40 (19.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 350 YALVQTDTCMYRSSPSCFGLQGAS 373
Y LV SSP C + G S
Sbjct: 297 YCLVAIGRLQVTSSPVCMDMNGMS 320
>MGI|MGI:107188 [details] [associations]
symbol:Arnt2 "aryl hydrocarbon receptor nuclear translocator
2" species:10090 "Mus musculus" [GO:0001666 "response to hypoxia"
evidence=ISO;TAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;NAS] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISA] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009410 "response to xenobiotic
stimulus" evidence=TAS] [GO:0009636 "response to toxic substance"
evidence=TAS] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IPI] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:107188 GO:GO:0005737
GO:GO:0007165 GO:GO:0043066 GO:GO:0032355 GO:GO:0003677
GO:GO:0008284 GO:GO:0009636 GO:GO:0001701 GO:GO:0001666
GO:GO:0045944 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0046982 SMART:SM00086
TIGRFAMs:TIGR00229 eggNOG:NOG293303 GeneTree:ENSGT00650000092935
GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:9915
HOGENOM:HOG000234380 HOVERGEN:HBG000164 KO:K15589 OMA:VCMDMSG
OrthoDB:EOG4K3KVQ EMBL:D63644 EMBL:AB093225 EMBL:BC054546
IPI:IPI00403978 IPI:IPI00828407 RefSeq:NP_031514.2 UniGene:Mm.38594
ProteinModelPortal:Q61324 SMR:Q61324 IntAct:Q61324 STRING:Q61324
PhosphoSite:Q61324 PRIDE:Q61324 Ensembl:ENSMUST00000085077
GeneID:11864 KEGG:mmu:11864 UCSC:uc009ief.1 UCSC:uc009ieh.1
InParanoid:Q61324 NextBio:279871 Bgee:Q61324 CleanEx:MM_ARNT2
Genevestigator:Q61324 GermOnline:ENSMUSG00000015709 Uniprot:Q61324
Length = 712
Score = 159 (61.0 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 43/147 (29%), Positives = 77/147 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKST- 124
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G + KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 --DG---AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
G ++Y +H D + L S + +
Sbjct: 180 GSTLYEQVHPDDVEKLREQLCTSENSM 206
Score = 40 (19.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 350 YALVQTDTCMYRSSPSCFGLQGAS 373
Y LV SSP C + G S
Sbjct: 309 YCLVAIGRLQVTSSPVCMDMSGMS 332
>RGD|2154 [details] [associations]
symbol:Arnt2 "aryl hydrocarbon receptor nuclear translocator 2"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP;ISO] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007417 "central nervous system
development" evidence=IEA;ISO] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0017162 "aryl hydrocarbon
receptor binding" evidence=IEA;ISO] [GO:0032355 "response to
estradiol stimulus" evidence=IEP] [GO:0042221 "response to chemical
stimulus" evidence=TAS] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:2154 GO:GO:0005634 GO:GO:0005737 GO:GO:0043066
GO:GO:0032355 GO:GO:0003677 GO:GO:0008284 GO:GO:0001701 GO:GO:0001666
GO:GO:0045944 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:9915 HOGENOM:HOG000234380 HOVERGEN:HBG000164
KO:K15589 OrthoDB:EOG4K3KVQ EMBL:U61157 EMBL:U61405 EMBL:AY264366
EMBL:DQ223732 IPI:IPI00211044 IPI:IPI00829430 RefSeq:NP_036913.3
UniGene:Rn.10518 HSSP:P27540 ProteinModelPortal:Q78E60 SMR:Q78E60
STRING:Q78E60 PhosphoSite:Q78E60 Ensembl:ENSRNOT00000017636
GeneID:25243 KEGG:rno:25243 UCSC:RGD:2154 InParanoid:Q78E60
NextBio:605835 Genevestigator:Q78E60 Uniprot:Q78E60
Length = 712
Score = 159 (61.0 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 43/147 (29%), Positives = 77/147 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKST- 124
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G + KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 --DG---AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
G ++Y +H D + L S + +
Sbjct: 180 GSTLYEQVHPDDVEKLREQLCTSENSM 206
Score = 40 (19.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 350 YALVQTDTCMYRSSPSCFGLQGAS 373
Y LV SSP C + G S
Sbjct: 309 YCLVAIGRLQVTSSPVCMDMSGMS 332
>UNIPROTKB|F1PPH3 [details] [associations]
symbol:ARNT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0017162 "aryl
hydrocarbon receptor binding" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:VCMDMSG EMBL:AAEX03002373 EMBL:AAEX03002374 EMBL:AAEX03002375
Ensembl:ENSCAFT00000022111 Uniprot:F1PPH3
Length = 717
Score = 159 (61.0 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 43/147 (29%), Positives = 77/147 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKST- 124
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G + KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 --DG---AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
G ++Y +H D + L S + +
Sbjct: 180 GSTLYEQVHPDDVEKLREQLCTSENSM 206
Score = 40 (19.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 350 YALVQTDTCMYRSSPSCFGLQGAS 373
Y LV SSP C + G S
Sbjct: 309 YCLVAIGRLQVTSSPVCMDMSGMS 332
>UNIPROTKB|Q9HBZ2 [details] [associations]
symbol:ARNT2 "Aryl hydrocarbon receptor nuclear
translocator 2" species:9606 "Homo sapiens" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0032355
"response to estradiol stimulus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISS;IPI] [GO:0007417 "central
nervous system development" evidence=ISS] [GO:0001701 "in utero
embryonic development" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0001666 "response to hypoxia" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0017162 "aryl
hydrocarbon receptor binding" evidence=ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0043066 GO:GO:0032355
GO:GO:0003677 GO:GO:0008284 GO:GO:0001701 GO:GO:0001666
GO:GO:0045944 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 EMBL:CH471136 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF185610 EMBL:AF185593
EMBL:AF185594 EMBL:AF185595 EMBL:AF185596 EMBL:AF185597
EMBL:AF185598 EMBL:AF185599 EMBL:AF185600 EMBL:AF185601
EMBL:AF185602 EMBL:AF185603 EMBL:AF185604 EMBL:AF185605
EMBL:AF185606 EMBL:AF185607 EMBL:AF185608 EMBL:AF185609
EMBL:AB002305 EMBL:AK295763 EMBL:BX647212 EMBL:BC036099
IPI:IPI00478506 IPI:IPI00796054 RefSeq:NP_055677.3
UniGene:Hs.459070 ProteinModelPortal:Q9HBZ2 SMR:Q9HBZ2
IntAct:Q9HBZ2 MINT:MINT-2867815 STRING:Q9HBZ2 PhosphoSite:Q9HBZ2
DMDM:125987793 PRIDE:Q9HBZ2 DNASU:9915 Ensembl:ENST00000303329
Ensembl:ENST00000527771 Ensembl:ENST00000533983 GeneID:9915
KEGG:hsa:9915 UCSC:uc002bfr.3 CTD:9915 GeneCards:GC15P080696
H-InvDB:HIX0012493 HGNC:HGNC:16876 HPA:CAB005081 HPA:HPA001056
MIM:606036 neXtProt:NX_Q9HBZ2 PharmGKB:PA24995 HOGENOM:HOG000234380
HOVERGEN:HBG000164 InParanoid:Q9HBZ2 KO:K15589 OMA:VCMDMSG
OrthoDB:EOG4K3KVQ ChiTaRS:ARNT2 GenomeRNAi:9915 NextBio:37404
ArrayExpress:Q9HBZ2 Bgee:Q9HBZ2 CleanEx:HS_ARNT2
Genevestigator:Q9HBZ2 GermOnline:ENSG00000172379 GO:GO:0017162
Uniprot:Q9HBZ2
Length = 717
Score = 159 (61.0 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 43/147 (29%), Positives = 77/147 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 72 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKST- 124
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G + KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 125 --DG---AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 179
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
G ++Y +H D + L S + +
Sbjct: 180 GSTLYEQVHPDDVEKLREQLCTSENSM 206
Score = 40 (19.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 350 YALVQTDTCMYRSSPSCFGLQGAS 373
Y LV SSP C + G S
Sbjct: 309 YCLVAIGRLQVTSSPVCMDMNGMS 332
>UNIPROTKB|E1BS64 [details] [associations]
symbol:ARNT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:VCMDMSG EMBL:AADN02041540 EMBL:AADN02041541 EMBL:AADN02041542
EMBL:AADN02041543 IPI:IPI00587220 Ensembl:ENSGALT00000010400
ArrayExpress:E1BS64 Uniprot:E1BS64
Length = 725
Score = 159 (61.0 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 43/147 (29%), Positives = 77/147 (52%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
E+RRR + YI EL++++ S +LA KPDK IL+ V+ +++++ S
Sbjct: 75 ERRRRNKMTQYITELSDMVPTCS------ALARKPDKLTILRMAVSHMKSMRGTGNKST- 127
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPD-GYVNFCTENIKSFIRYSRQEVL 174
G + KP+ +T + L L+LEA +GFLFVV + G V + ++++ + + E
Sbjct: 128 --DG---AYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWF 182
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
G ++Y +H D + L S + +
Sbjct: 183 GSTLYEQVHPDDVEKLREQLCTSENSM 209
Score = 40 (19.1 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 350 YALVQTDTCMYRSSPSCFGLQGAS 373
Y LV SSP C + G S
Sbjct: 312 YCLVAIGRLQVTSSPVCMDMNGMS 335
>FB|FBgn0023076 [details] [associations]
symbol:Clk "Clock" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IDA;NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI;NAS;TAS]
[GO:0007623 "circadian rhythm" evidence=NAS;IMP;TAS] [GO:0046982
"protein heterodimerization activity" evidence=NAS;IPI] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=NAS] [GO:0048148
"behavioral response to cocaine" evidence=NAS;TAS] [GO:0045475
"locomotor rhythm" evidence=IMP;NAS;TAS] [GO:0008062 "eclosion
rhythm" evidence=NAS;TAS] [GO:0045187 "regulation of circadian
sleep/wake cycle, sleep" evidence=IMP] [GO:0007622 "rhythmic
behavior" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IDA;NAS;TAS] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=NAS] [GO:0032922
"circadian regulation of gene expression" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF00010 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 EMBL:AE014296 GO:GO:0003677
GO:GO:0045187 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0004871 GO:GO:0046982
GO:GO:0048148 GO:GO:0045475 GO:GO:0032922 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG300360 KO:K02223 EMBL:AF065133 EMBL:AF069997
EMBL:AF067207 PIR:T13062 PIR:T13068 PIR:T13071
RefSeq:NP_001014574.1 RefSeq:NP_001014576.1 RefSeq:NP_523964.2
UniGene:Dm.7596 ProteinModelPortal:O61735 SMR:O61735 IntAct:O61735
MINT:MINT-7025605 STRING:O61735 PaxDb:O61735
EnsemblMetazoa:FBtr0100132 GeneID:38872 KEGG:dme:Dmel_CG7391
UCSC:CG7391-RA CTD:363233 FlyBase:FBgn0023076 InParanoid:O61735
OMA:IVACHEE OrthoDB:EOG4HHMHD PhylomeDB:O61735 GenomeRNAi:38872
NextBio:810786 Bgee:O61735 GermOnline:CG7391 GO:GO:0008062
Uniprot:O61735
Length = 1027
Score = 162 (62.1 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 41/140 (29%), Positives = 78/140 (55%)
Query: 54 LNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSS 113
L+EK+RR+Q N+ + +L+ LIS +S K DK +L+ T+ ++N + ++
Sbjct: 22 LSEKKRRDQFNSLVNDLSALISTSSR---------KMDKSTVLKSTIAFLKNHNE---AT 69
Query: 114 DAVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQE 172
D + E+ KP ++N+ L+LE+L+GF+ V + G + + +E+I S + Y Q+
Sbjct: 70 DRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQD 129
Query: 173 VLGKSVYNLIHHGDHARFHN 192
+ ++Y+L + DH N
Sbjct: 130 LYNMTIYDLAYEMDHEALLN 149
Score = 40 (19.1 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 272 IPPTDKQLSAP--IEQFTMKLD-RSGTIIG------MDTSGVSQTHTQYLNKAVAC 318
I PT + ++ +E + LD R+ IIG + TSG H L+ VAC
Sbjct: 260 IDPTSNEFTSKHSMEWKFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVAC 315
>UNIPROTKB|E1BY63 [details] [associations]
symbol:LOC100859347 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 EMBL:AADN02034423 IPI:IPI00598982
Ensembl:ENSGALT00000006889 ArrayExpress:E1BY63 Uniprot:E1BY63
Length = 586
Score = 154 (59.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 39/140 (27%), Positives = 70/140 (50%)
Query: 57 KRRREQENNYIEELAELIS-AASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
KR RE+ N +E LA L+ A + L++ A L+ + + ++
Sbjct: 27 KRHRERLNRELERLAALLPFPEEVAAGLDKLSILRLSAAFLR--AKSFFRVALKNHGAEG 84
Query: 116 VQQGEVSSSKPTVITNEVL-GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
++G S+P + T V G LLL+AL GF+ VV +G + + + I+ ++ + + +V+
Sbjct: 85 AERGGDHDSRPALGTAAVPEGELLLQALNGFVLVVTSEGLIFYSSHTIQDYLGFHQTDVM 144
Query: 175 GKSVYNLIHHGDHARFHNCL 194
+S++ LIH DH F L
Sbjct: 145 HQSIFKLIHTEDHQEFRRNL 164
>ZFIN|ZDB-GENE-010803-1 [details] [associations]
symbol:sim2 "single-minded homolog 2 (Drosophila)"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-010803-1 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 HSSP:Q99814
eggNOG:NOG310284 OrthoDB:EOG4QC14V CTD:6493 EMBL:BC065360
EMBL:AF363019 IPI:IPI00487129 RefSeq:NP_571911.1 UniGene:Dr.15420
GeneID:114450 KEGG:dre:114450 InParanoid:Q8UVV3 OMA:ANIEPEM
NextBio:20796935 Uniprot:Q8UVV3
Length = 585
Score = 153 (58.9 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 45/146 (30%), Positives = 74/146 (50%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
K RRE+EN ELA+L+ S ++ + DK +I++ T + + K + D +
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYL---KMRAVFPDGL 60
Query: 117 QQ--GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
+ G+ + P I + LG LL+ L+GF+FVV DG + + +E + S+ E+
Sbjct: 61 GEAWGQSARVSPLDIMAKDLGSHLLQTLDGFVFVVASDGKILYISETASVHLGLSQVELT 120
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQ 200
G S++ IH DH L S+HQ
Sbjct: 121 GNSIFEYIHPSDHDEMSAVL--STHQ 144
>ZFIN|ZDB-GENE-050922-1 [details] [associations]
symbol:ahr1b "aryl hydrocarbon receptor 1b"
species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0042221 "response to chemical stimulus"
evidence=IDA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-050922-1
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0042221
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
GeneTree:ENSGT00700000104038 HOVERGEN:HBG007313 KO:K09093
EMBL:BX908726 EMBL:CR394522 EMBL:DQ016494 IPI:IPI00498003
RefSeq:NP_001019987.1 UniGene:Dr.93042 STRING:Q4U3K9
Ensembl:ENSDART00000028787 GeneID:554265 KEGG:dre:554265 CTD:554265
InParanoid:Q4U3K9 OMA:HDNSKAT NextBio:20880738 Uniprot:Q4U3K9
Length = 940
Score = 155 (59.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 48/182 (26%), Positives = 86/182 (47%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-------NIKQQ 109
KR R++ N+ ++ L+ L+ F E ++S DK +IL+ +V+ +R +K
Sbjct: 29 KRHRDRLNSELDRLSSLLP---FPEEVTSSL---DKLSILRLSVSYLRAKNFFSVTLKNH 82
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVL--GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIR 167
+ + +SK T + + L G LLL+AL GF+ VV +G + +C+ I+ ++
Sbjct: 83 NCNGLSSNNSNHDNSKATGLVDGCLREGELLLQALNGFVLVVTAEGIIFYCSHTIQDYLG 142
Query: 168 YSRQEVLGKSVYNLIHHGDHARF----HNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTP 223
+ + +V+ ++V+ LIH D F H L P S G SL P
Sbjct: 143 FHQTDVMHQNVFELIHTEDQQAFRRNLHWALNPPPASTQTEDSSEDGDPAPNMSLVLCNP 202
Query: 224 NR 225
++
Sbjct: 203 DQ 204
>FB|FBgn0004666 [details] [associations]
symbol:sim "single-minded" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007418
"ventral midline development" evidence=IMP] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS;IPI] [GO:0007417 "central nervous system
development" evidence=NAS] [GO:0007398 "ectoderm development"
evidence=TAS] [GO:0007628 "adult walking behavior"
evidence=IMP;TAS] [GO:0040011 "locomotion" evidence=TAS]
[GO:0007420 "brain development" evidence=IMP] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007419 "ventral cord development"
evidence=IMP] [GO:0035225 "determination of genital disc
primordium" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IMP] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
GO:GO:0007411 GO:GO:0007420 GO:GO:0007419 GO:GO:0045944
GO:GO:0005667 GO:GO:0035225 GO:GO:0000978 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007398 GO:GO:0007628 GO:GO:0007418 eggNOG:NOG310284
KO:K09100 EMBL:AF071934 EMBL:AY129457 EMBL:M19020 PIR:A29945
PIR:A41647 RefSeq:NP_524340.2 RefSeq:NP_731771.3 UniGene:Dm.4557
ProteinModelPortal:P05709 SMR:P05709 STRING:P05709 GeneID:41612
KEGG:dme:Dmel_CG7771 CTD:41612 FlyBase:FBgn0004666
InParanoid:P05709 OrthoDB:EOG4MPG5H GenomeRNAi:41612 NextBio:824647
Bgee:P05709 GermOnline:CG7771 Uniprot:P05709
Length = 697
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 48/160 (30%), Positives = 80/160 (50%)
Query: 43 CAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 102
CA+ +++ N + RRE+EN ELA+L+ A S L DK ++++ T +
Sbjct: 23 CAMKEKSKNAA---RTRREKENTEFCELAKLLPLP--AAITSQL----DKASVIRLTTSY 73
Query: 103 IRNIKQQETSSDAVQQGEVSSSKPTV---ITNEVLGPLLLEALEGFLFVVNPDGYVNFCT 159
+ K ++ D + GE S P + T + LG LL+ L+GF+FVV PDG + + +
Sbjct: 74 L---KMRQVFPDGL--GEAWGSSPAMQRGATIKELGSHLLQTLDGFIFVVAPDGKIMYIS 128
Query: 160 ENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSH 199
E + S+ E+ G S++ IH+ D + L H
Sbjct: 129 ETASVHLGLSQVELTGNSIFEYIHNYDQDEMNAILSLHPH 168
>RGD|1308016 [details] [associations]
symbol:Sim2 "single-minded homolog 2 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0009880 "embryonic
pattern specification" evidence=IEA;ISO] [GO:0030324 "lung
development" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:1308016 GO:GO:0005634 GO:GO:0003677
GO:GO:0030324 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00700000104038
GO:GO:0009880 KO:K09100 CTD:6493 OrthoDB:EOG43N7CB EMBL:CH474083
IPI:IPI00362902 RefSeq:NP_001100578.1 UniGene:Rn.113883
Ensembl:ENSRNOT00000002294 GeneID:304071 KEGG:rno:304071
UCSC:RGD:1308016 NextBio:652548 Uniprot:D4AA36
Length = 656
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/132 (32%), Positives = 68/132 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>MGI|MGI:98307 [details] [associations]
symbol:Sim2 "single-minded homolog 2 (Drosophila)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030324 "lung development" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:98307 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0003677 GO:GO:0030324 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 GO:GO:0009880 eggNOG:NOG310284
HOGENOM:HOG000236298 HOVERGEN:HBG003936 KO:K09100 CTD:6493
OMA:KKPMLPA OrthoDB:EOG43N7CB EMBL:U42554 EMBL:D63383 EMBL:U40576
EMBL:AF023873 EMBL:AF023864 EMBL:AF023865 EMBL:AF023869
EMBL:AF023871 EMBL:AF023870 EMBL:AF023868 EMBL:AF023867
EMBL:AF023866 EMBL:AF023872 EMBL:D64135 IPI:IPI00117078
RefSeq:NP_035507.2 UniGene:Mm.4775 ProteinModelPortal:Q61079
SMR:Q61079 IntAct:Q61079 STRING:Q61079 PhosphoSite:Q61079
PRIDE:Q61079 Ensembl:ENSMUST00000072182 GeneID:20465 KEGG:mmu:20465
UCSC:uc008aae.1 InParanoid:Q61079 NextBio:298563 Bgee:Q61079
CleanEx:MM_SIM2 Genevestigator:Q61079 Uniprot:Q61079
Length = 657
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/132 (32%), Positives = 68/132 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRTGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDH 187
S+Y IH DH
Sbjct: 122 NSIYEYIHPSDH 133
>UNIPROTKB|E1BSJ1 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0009880
"embryonic pattern specification" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
PROSITE:PS51302 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 EMBL:AADN02010800 IPI:IPI00597363
Ensembl:ENSGALT00000025849 OMA:FEPQDLI Uniprot:E1BSJ1
Length = 419
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 46/145 (31%), Positives = 72/145 (49%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRIGPLDNVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDHARFHNCLVPSSHQ 200
S+Y IH DH L ++HQ
Sbjct: 122 NSIYEYIHPSDHDEMTAVL--TAHQ 144
>UNIPROTKB|H7BZA3 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC016738 EMBL:AC092168 EMBL:AC106891
HGNC:HGNC:7895 ChiTaRS:NPAS2 ProteinModelPortal:H7BZA3
Ensembl:ENST00000448812 Uniprot:H7BZA3
Length = 258
Score = 144 (55.7 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 38/147 (25%), Positives = 76/147 (51%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 7 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQ--KHNEVSAQ 55
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
KP+ ++NE L+LEAL+GF+ V DG + + +++I + + +V+
Sbjct: 56 TEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSIIYVSDSITPLLGHLPSDVM 115
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
+++ N + +H+ + L SSH +
Sbjct: 116 DQNLLNFLPEQEHSEVYKIL--SSHML 140
>UNIPROTKB|Q14190 [details] [associations]
symbol:SIM2 "Single-minded homolog 2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000014 InterPro:IPR010578
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 PROSITE:PS51302 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0007399
GO:GO:0030154 GO:GO:0003677 GO:GO:0030324 EMBL:CH471079
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 GO:GO:0009880 EMBL:AP000697 EMBL:AP001726
eggNOG:NOG310284 HOVERGEN:HBG003936 KO:K09100 EMBL:U80456
EMBL:U80457 EMBL:AB003185 EMBL:BC110444 EMBL:D85922 EMBL:D44444
EMBL:D44445 EMBL:D44446 EMBL:D44447 EMBL:D44448 EMBL:AJ001858
EMBL:X84790 EMBL:D70838 IPI:IPI00029105 IPI:IPI00220895 PIR:A58520
PIR:I78525 PIR:I78526 RefSeq:NP_005060.1 RefSeq:NP_033664.2
UniGene:Hs.146186 ProteinModelPortal:Q14190 SMR:Q14190
IntAct:Q14190 STRING:Q14190 PhosphoSite:Q14190 DMDM:2851630
PaxDb:Q14190 PRIDE:Q14190 Ensembl:ENST00000290399
Ensembl:ENST00000430056 GeneID:6493 KEGG:hsa:6493 UCSC:uc002yvq.3
UCSC:uc002yvr.2 CTD:6493 GeneCards:GC21P038071 HGNC:HGNC:10883
HPA:HPA029295 MIM:600892 neXtProt:NX_Q14190 PharmGKB:PA35783
InParanoid:Q14190 OMA:KKPMLPA OrthoDB:EOG43N7CB PhylomeDB:Q14190
GenomeRNAi:6493 NextBio:25235 Bgee:Q14190 CleanEx:HS_SIM2
Genevestigator:Q14190 GermOnline:ENSG00000159263 Uniprot:Q14190
Length = 667
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 46/145 (31%), Positives = 73/145 (50%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDHARFHNCLVPSSHQ 200
S+Y IH DH L ++HQ
Sbjct: 122 NSIYEYIHPSDHDEMTAVL--TAHQ 144
>UNIPROTKB|E2RDR2 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 PROSITE:PS51302
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00700000104038 OMA:KKPMLPA
EMBL:AAEX03016522 Ensembl:ENSCAFT00000015386 Uniprot:E2RDR2
Length = 562
Score = 148 (57.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 45/145 (31%), Positives = 72/145 (49%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-NIKQQETSSDA 115
K RRE+EN ELA+L+ S ++ + DK +I++ T + ++ E DA
Sbjct: 10 KTRREKENGEFYELAKLLPLPS------AITSQLDKASIIRLTTSYLKMRAVFPEGLGDA 63
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLG 175
G+ + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G
Sbjct: 64 --WGQPCRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTG 121
Query: 176 KSVYNLIHHGDHARFHNCLVPSSHQ 200
S+Y IH DH L ++HQ
Sbjct: 122 NSIYEYIHPSDHDEMTAVL--AAHQ 144
>UNIPROTKB|H7C0Z2 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC016738 EMBL:AC092168 EMBL:AC106891
HGNC:HGNC:7895 ChiTaRS:NPAS2 ProteinModelPortal:H7C0Z2
Ensembl:ENST00000427413 Uniprot:H7C0Z2
Length = 208
Score = 135 (52.6 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 34/137 (24%), Positives = 71/137 (51%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 83 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQ--KHNEVSAQ 131
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
KP+ ++NE L+LEAL+GF+ V DG + + +++I + + +V+
Sbjct: 132 TEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSIIYVSDSITPLLGHLPSDVM 191
Query: 175 GKSVYNLIHHGDHARFH 191
+++ N + +H+ +
Sbjct: 192 DQNLLNFLPEQEHSEVY 208
>RGD|1309681 [details] [associations]
symbol:Npas2 "neuronal PAS domain protein 2" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0042745 "circadian
sleep/wake cycle" evidence=IEA;ISO] [GO:0045475 "locomotor rhythm"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA;ISO] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:1309681 GO:GO:0005737
GO:GO:0003677 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0045475 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:4862 KO:K09026 GO:GO:0042745 IPI:IPI00870127
RefSeq:NP_001101684.2 UniGene:Rn.8285 Ensembl:ENSRNOT00000059571
GeneID:316351 KEGG:rno:316351 UCSC:RGD:1309681 NextBio:670757
Uniprot:F1MAG2
Length = 816
Score = 146 (56.5 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 39/147 (26%), Positives = 77/147 (52%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTR---------KLDKTTVLEKVIGFLQ--KHNEVSAQ 65
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
KP+ ++NE L+LEAL+GF+ VV DG + + +++I + + +V+
Sbjct: 66 TEICDIQQDWKPSFLSNEEFTQLMLEALDGFVIVVTTDGSIIYVSDSITPLLGHLPSDVM 125
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
+++ N + +H+ + L SSH +
Sbjct: 126 DQNLLNFLPEQEHSEVYKIL--SSHML 150
>ZFIN|ZDB-GENE-060503-934 [details] [associations]
symbol:npas3b "neuronal PAS domain protein 3b"
species:7955 "Danio rerio" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-060503-934 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 EMBL:BX296539 IPI:IPI00612477
Ensembl:ENSDART00000101511 ArrayExpress:F1Q754 Bgee:F1Q754
Uniprot:F1Q754
Length = 770
Score = 145 (56.1 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 53/206 (25%), Positives = 94/206 (45%)
Query: 33 MSSLAVKPDKCAILQETVNQ-CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPD 91
+ L KP LQ + N R R + N+ E EL +++S + D
Sbjct: 20 LQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENF--EFFELAKMLPLPGAITS---QLD 74
Query: 92 KCAILQETVNQI--RNIKQQ-ETSSDAVQQGEVSSSKP-----TVITN---EVLGPLLLE 140
K +I++ T++ + R+ Q + + +GE + SK +++T+ + LG LL+
Sbjct: 75 KASIIRLTISYLHMRHFASQGDPPWSPLMEGENNCSKVRRTSHSLVTDIFEQHLGAHLLQ 134
Query: 141 ALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSH- 199
+L+GF+FVV+ +G + +E + ++ S+ E+ G SV++ IH DH L H
Sbjct: 135 SLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPADHVEMAERLGIRPHL 194
Query: 200 --QVNAWTSDSGGQAGKRPSLTASTP 223
+ TS + S A TP
Sbjct: 195 RAEAGCQTSHESASSSASTSSLAGTP 220
>MGI|MGI:109232 [details] [associations]
symbol:Npas2 "neuronal PAS domain protein 2" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0042745 "circadian sleep/wake
cycle" evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:109232 GO:GO:0005829 GO:GO:0005654 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
GO:GO:0045475 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:NOG300360 HOGENOM:HOG000234382 HOVERGEN:HBG050997 CTD:4862
KO:K09026 OrthoDB:EOG444KJQ GO:GO:0042745 EMBL:U77969
IPI:IPI00625137 RefSeq:NP_032745.2 UniGene:Mm.2380
ProteinModelPortal:P97460 SMR:P97460 STRING:P97460
PhosphoSite:P97460 PRIDE:P97460 GeneID:18143 KEGG:mmu:18143
UCSC:uc007atd.2 InParanoid:P97460 NextBio:293396 CleanEx:MM_NPAS2
Genevestigator:P97460 GermOnline:ENSMUSG00000026077 Uniprot:P97460
Length = 816
Score = 146 (56.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 39/147 (26%), Positives = 77/147 (52%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQ--KHNEVSAQ 65
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
KP+ ++NE L+LEAL+GF+ VV DG + + +++I + + +V+
Sbjct: 66 TEICDIQQDWKPSFLSNEEFTQLMLEALDGFVIVVTTDGSIIYVSDSITPLLGHLPADVM 125
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
+++ N + +H+ + L SSH +
Sbjct: 126 DQNLLNFLPEQEHSEVYKIL--SSHML 150
Score = 43 (20.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 196 PSSHQVNAWTSDSG---GQAGKRPSLTASTPN 224
P SH N+ S GQA PS AS P+
Sbjct: 719 PDSHPTNSSASTPVLLMGQAVLHPSFPASRPS 750
Score = 37 (18.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 212 AGKRPSLTASTPNRTFNIRLLISSTHLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARR 271
A +P L +TP ++ I+ST +T ++ +S +S++G P M ++
Sbjct: 577 APSQPQLVVNTP-----LQGQITSTQVT-------NQHLLRESNVISAQG-PKPMRSSQL 623
Query: 272 IPPTDKQLSAPIEQFT 287
+P + + LS+ QF+
Sbjct: 624 LPASGRSLSSLPSQFS 639
>UNIPROTKB|F1SEI6 [details] [associations]
symbol:F1SEI6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
EMBL:FP312884 Ensembl:ENSSSCT00000016739 Uniprot:F1SEI6
Length = 385
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/143 (29%), Positives = 74/143 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R + + +
Sbjct: 37 KRHRDRLNTELDRLASLLP---FPQDVIN---KLDKLSVLRLSVSYLRAKSFFDDTFISS 90
Query: 117 QQG-EVSSSKPTVITNEVL----GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
G + SS N++L G LL+AL GF+ VV D V + + I+ ++ + +
Sbjct: 91 SLGFQKSSGYDINFLNKLLYSEEGEFLLQALNGFVLVVTTDALVFYASSTIQDYLGFQQS 150
Query: 172 EVLGKSVYNLIHHGDHARFHNCL 194
+V+ +SVY LIH D A F L
Sbjct: 151 DVIHQSVYELIHTEDRAEFQRQL 173
>UNIPROTKB|F1STF9 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:KFVGNFR EMBL:CU407191
EMBL:CU972480 Ensembl:ENSSSCT00000008948 Uniprot:F1STF9
Length = 796
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 38/147 (25%), Positives = 76/147 (51%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQ--KHNEVSAQ 65
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
KP+ ++NE L+LEAL+GF+ V DG + + +++I + + +V+
Sbjct: 66 TEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSILYVSDSITPLLGHLPSDVM 125
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
+++ N + +H+ + L SSH +
Sbjct: 126 DQNLLNFLPEQEHSEVYKML--SSHML 150
>UNIPROTKB|J9P4Q7 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03007435
Ensembl:ENSCAFT00000047996 Uniprot:J9P4Q7
Length = 668
Score = 143 (55.4 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/150 (26%), Positives = 79/150 (52%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVN--QIRNIK-QQET 111
+EK+RR+Q N I+EL+ ++ + K DK +L++ + Q N++ +T
Sbjct: 7 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQKHNVEVSAQT 57
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+QQ KP+ ++NE L+LEAL+GF+ V DG + + +++I + +
Sbjct: 58 EICDIQQ----DWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSILYVSDSITPLLGHLPS 113
Query: 172 EVLGKSVYNLIHHGDHARFHNCLVPSSHQV 201
+V+ +++ N + +H+ + L SSH +
Sbjct: 114 DVMDQNLLNFLPEQEHSEVYKML--SSHML 141
>UNIPROTKB|F1PPU8 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:KFVGNFR EMBL:AAEX03007435
Ensembl:ENSCAFT00000003487 Uniprot:F1PPU8
Length = 818
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 38/147 (25%), Positives = 76/147 (51%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQ--KHNEVSAQ 65
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
KP+ ++NE L+LEAL+GF+ V DG + + +++I + + +V+
Sbjct: 66 TEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSILYVSDSITPLLGHLPSDVM 125
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
+++ N + +H+ + L SSH +
Sbjct: 126 DQNLLNFLPEQEHSEVYKML--SSHML 150
>UNIPROTKB|F6QL92 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045475 "locomotor
rhythm" evidence=IEA] [GO:0042745 "circadian sleep/wake cycle"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0045475 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042745 OMA:KFVGNFR EMBL:DAAA02030201 IPI:IPI00706386
Ensembl:ENSBTAT00000026257 Uniprot:F6QL92
Length = 794
Score = 143 (55.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 38/147 (25%), Positives = 76/147 (51%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 7 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQ--KHNEVSAQ 55
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
KP+ ++NE L+LEAL+GF+ V DG + + +++I + + +V+
Sbjct: 56 TEICDIQPDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSILYVSDSITPLLGHLPSDVM 115
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
+++ N + +H+ + L SSH +
Sbjct: 116 DQNLLNFLPEQEHSEVYKML--SSHML 140
Score = 44 (20.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 297 IGMDTSGVSQTHTQYLNKAVACKTSATVWTCPNS 330
+ M TSG++ +H+ + + K+S T + P S
Sbjct: 385 LDMGTSGLNTSHSPSASSRSSHKSSRTAMSEPTS 418
Score = 37 (18.1 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 363 SPSCFGLQGA 372
SPSC G GA
Sbjct: 192 SPSCNGFDGA 201
>UNIPROTKB|F8W0C2 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR013767
Pfam:PF00989 PROSITE:PS50112 SMART:SM00091 GO:GO:0006355
GO:GO:0004871 TIGRFAMs:TIGR00229 HGNC:HGNC:19311 EMBL:AL109769
EMBL:AL133305 EMBL:AL139296 EMBL:AL157689 EMBL:AL158802
EMBL:AL161851 EMBL:AL355886 IPI:IPI01020861
ProteinModelPortal:F8W0C2 SMR:F8W0C2 Ensembl:ENST00000551008
UCSC:uc001wrw.3 ArrayExpress:F8W0C2 Bgee:F8W0C2 Uniprot:F8W0C2
Length = 155
Score = 117 (46.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 29/106 (27%), Positives = 54/106 (50%)
Query: 126 PTVITNEV----LGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNL 181
P+ + EV LG +L++L+GF+F +N +G + +E + ++ S+ E+ G SV++
Sbjct: 36 PSALAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDY 95
Query: 182 IHHGDHARFHNCL----VPSSHQVNAWTSDSGGQAGKRPSLTASTP 223
+H GDH L P ++ T++ G + S + TP
Sbjct: 96 VHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSS-QSETP 140
>UNIPROTKB|H7C0J4 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00353 GO:GO:0005737 GO:GO:0003700
GO:GO:0005667 GO:GO:0004871 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC016738 EMBL:AC092168 EMBL:AC106891 HGNC:HGNC:7895
ChiTaRS:NPAS2 ProteinModelPortal:H7C0J4 Ensembl:ENST00000451740
Bgee:H7C0J4 Uniprot:H7C0J4
Length = 107
Score = 116 (45.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ +E S+
Sbjct: 1 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQKHNGKEVSAQ 51
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENI 162
KP+ ++NE L+LEAL+GF+ V DG + + +++I
Sbjct: 52 TEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSIIYVSDSI 99
>UNIPROTKB|F1NLX8 [details] [associations]
symbol:AHR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006950 "response to
stress" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0009410 "response to xenobiotic stimulus"
evidence=IEA] [GO:0030850 "prostate gland development"
evidence=IEA] [GO:0030888 "regulation of B cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0006950 GO:GO:0004879
GO:GO:0043565 GO:GO:0003705 GO:GO:0000122 GO:GO:0044212
SMART:SM00086 GO:GO:0009410 Gene3D:4.10.280.10
GeneTree:ENSGT00700000104038 OMA:QQLCQKM GO:GO:0045899
GO:GO:0030888 EMBL:AADN02000881 EMBL:AADN02000879 EMBL:AADN02000880
IPI:IPI00583925 Ensembl:ENSGALT00000017616 Uniprot:F1NLX8
Length = 839
Score = 141 (54.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 42/161 (26%), Positives = 87/161 (54%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-----NIKQQET 111
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R ++ + +
Sbjct: 15 KRHRDRLNAELDRLASLLP---FPQDVIA---KLDKLSVLRLSVSYLRAKSFFDVALKSS 68
Query: 112 SSDAVQQGEVSSSKPTVITN--EVL-GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
+S +++ + S+ + ++L G LLL+AL GF+ VV D V + + I+ ++ +
Sbjct: 69 NSTRLERNGIQESRTAKLGEGMQILEGELLLQALNGFVLVVTADALVFYVSSTIQDYLGF 128
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSG 209
+ +++ +SV+ LIH D F L + + A ++DSG
Sbjct: 129 QQSDIIHQSVFELIHTEDRPEFQRQLHWALNP--AQSADSG 167
>ZFIN|ZDB-GENE-020531-2 [details] [associations]
symbol:ahr1a "aryl hydrocarbon receptor 1a"
species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0042221 "response
to chemical stimulus" evidence=IGI] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-020531-2 GO:GO:0005737 GO:GO:0003677 GO:GO:0042221
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 Gene3D:4.10.280.10 GeneTree:ENSGT00700000104038
EMBL:BX511151 IPI:IPI00866185 Ensembl:ENSDART00000049830
ArrayExpress:F1R5Y6 Bgee:F1R5Y6 Uniprot:F1R5Y6
Length = 808
Score = 140 (54.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 59/210 (28%), Positives = 96/210 (45%)
Query: 46 LQETVNQ---CLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQ 102
+Q++V Q C+ + + E LA L F + + S DK IL+ +V+
Sbjct: 34 VQKSVKQPLTCVKSNPSKRHRDRMNEVLASLAREIPFPQEIVSTL---DKLTILRLSVSY 90
Query: 103 IR---NIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCT 159
+R + K S + QQ +++K E G LL+A+ GFL VV G V + +
Sbjct: 91 LRAKSHFKITLNSKSSSQQA--NNTKQAQEQPE--GEFLLQAINGFLLVVTSSGIVFYVS 146
Query: 160 ENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCL--------VPSSHQVNAWTSDSGGQ 211
NI+ ++ + + +V+ +SVY LIH D F L P S Q+ + D+
Sbjct: 147 SNIEDYLGFHQSDVIHQSVYELIHTEDRHEFQRQLHWALNPGFTPDSRQLVQASPDASRT 206
Query: 212 --AGKRPSLTASTP-NRTF--NIRLLISST 236
+ ++ SL ST R F +R L+ ST
Sbjct: 207 CYSPEQLSLENSTCLERNFICRLRCLLDST 236
>UNIPROTKB|Q8R4S6 [details] [associations]
symbol:Ahr "Aryl hydrocarbon receptor" species:10091 "Mus
musculus castaneus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA;TAS] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006805 "xenobiotic metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=ISS] [GO:0006950 "response
to stress" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=ISS] [GO:0030850 "prostate gland development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IDA] [GO:0048608 "reproductive structure development"
evidence=IMP] [GO:0048732 "gland development" evidence=IMP]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005737
GO:GO:0006915 GO:GO:0006950 GO:GO:0004879 GO:GO:0043565
GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0007049
GO:GO:0006805 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG007313 GO:GO:0045899 GO:GO:0030850 EMBL:AF405565
UniGene:Mm.341377 ProteinModelPortal:Q8R4S6 SMR:Q8R4S6
Uniprot:Q8R4S6
Length = 848
Score = 140 (54.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-----NIKQQET 111
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R ++ + T
Sbjct: 36 KRHRDRLNTELDRLASLLP---FPQDVIN---KLDKLSVLRLSVSYLRAKSFFDVALKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVL--GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+D + G + + + L G LL+AL GF+ VV D V + + I+ ++ +
Sbjct: 90 PAD--RNGGQDQCRAQIRDWQDLQEGEFLLQALNGFVLVVTADALVFYASSTIQDYLGFQ 147
Query: 170 RQEVLGKSVYNLIHHGDHARF----HNCLVPSSHQ 200
+ +V+ +SVY LIH D A F H L P S Q
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQ 182
>MGI|MGI:105043 [details] [associations]
symbol:Ahr "aryl-hydrocarbon receptor" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0000902 "cell
morphogenesis" evidence=IMP] [GO:0001541 "ovarian follicle
development" evidence=ISO] [GO:0001568 "blood vessel development"
evidence=IMP] [GO:0001569 "patterning of blood vessels"
evidence=IMP] [GO:0001782 "B cell homeostasis" evidence=IMP;TAS]
[GO:0001889 "liver development" evidence=IMP] [GO:0001922 "B-1 B
cell homeostasis" evidence=TAS] [GO:0001974 "blood vessel
remodeling" evidence=IMP] [GO:0002260 "lymphocyte homeostasis"
evidence=IMP;TAS] [GO:0002376 "immune system process" evidence=IMP]
[GO:0003085 "negative regulation of systemic arterial blood
pressure" evidence=IMP] [GO:0003214 "cardiac left ventricle
morphogenesis" evidence=IMP] [GO:0003243 "circumferential growth
involved in left ventricle morphogenesis" evidence=IMP] [GO:0003677
"DNA binding" evidence=ISO;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO;IDA;TAS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0004874
"aryl hydrocarbon receptor activity" evidence=ISO] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005829
"cytosol" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA;TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0006805 "xenobiotic metabolic
process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=IDA] [GO:0006950 "response to stress" evidence=ISO;IDA]
[GO:0007049 "cell cycle" evidence=IDA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008217 "regulation of blood pressure"
evidence=TAS] [GO:0009410 "response to xenobiotic stimulus"
evidence=ISO;IDA] [GO:0009636 "response to toxic substance"
evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0014070 "response to organic cyclic compound"
evidence=ISO] [GO:0030183 "B cell differentiation" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=ISO] [GO:0030850 "prostate gland development"
evidence=IMP] [GO:0030888 "regulation of B cell proliferation"
evidence=ISO] [GO:0034751 "aryl hydrocarbon receptor complex"
evidence=TAS] [GO:0034752 "cytosolic aryl hydrocarbon receptor
complex" evidence=TAS] [GO:0034753 "nuclear aryl hydrocarbon
receptor complex" evidence=TAS] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0035166 "post-embryonic hemopoiesis"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043029 "T cell homeostasis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045793 "positive regulation of cell size"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IDA] [GO:0045906 "negative regulation of vasoconstriction"
evidence=IMP] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048514 "blood vessel morphogenesis"
evidence=IMP] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048608 "reproductive structure development" evidence=IMP]
[GO:0048732 "gland development" evidence=IMP] [GO:0048745 "smooth
muscle tissue development" evidence=IMP] [GO:0050880 "regulation of
blood vessel size" evidence=IMP] [GO:0051879 "Hsp90 protein
binding" evidence=ISO;TAS] [GO:0060420 "regulation of heart growth"
evidence=TAS] [GO:0060547 "negative regulation of necrotic cell
death" evidence=IMP] [GO:0060841 "venous blood vessel development"
evidence=IMP] [GO:0060993 "kidney morphogenesis" evidence=IMP]
[GO:0061009 "common bile duct development" evidence=IMP]
[GO:0071320 "cellular response to cAMP" evidence=IDA] [GO:0072102
"glomerulus morphogenesis" evidence=IMP] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005737 GO:GO:0006915
GO:GO:0006950 GO:GO:0004879 GO:GO:0043565 GO:GO:0005667
GO:GO:0003705 GO:GO:0000122 GO:GO:0007049 GO:GO:0006805
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG007313
GO:GO:0045899 GO:GO:0030850 EMBL:AF405565 UniGene:Mm.341377
ProteinModelPortal:Q8R4S6 SMR:Q8R4S6 Uniprot:Q8R4S6
Length = 848
Score = 140 (54.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-----NIKQQET 111
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R ++ + T
Sbjct: 36 KRHRDRLNTELDRLASLLP---FPQDVIN---KLDKLSVLRLSVSYLRAKSFFDVALKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVL--GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+D + G + + + L G LL+AL GF+ VV D V + + I+ ++ +
Sbjct: 90 PAD--RNGGQDQCRAQIRDWQDLQEGEFLLQALNGFVLVVTADALVFYASSTIQDYLGFQ 147
Query: 170 RQEVLGKSVYNLIHHGDHARF----HNCLVPSSHQ 200
+ +V+ +SVY LIH D A F H L P S Q
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQ 182
>UNIPROTKB|I3LF82 [details] [associations]
symbol:AHR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0006950 GO:GO:0004879 GO:GO:0043565 GO:GO:0003705
GO:GO:0000122 GO:GO:0044212 SMART:SM00086 GO:GO:0009410
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
OMA:QQLCQKM GO:GO:0045899 GO:GO:0030850 GO:GO:0030888 EMBL:FP102833
Ensembl:ENSSSCT00000031031 Uniprot:I3LF82
Length = 849
Score = 140 (54.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 41/145 (28%), Positives = 73/145 (50%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-------NIKQQ 109
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R ++K
Sbjct: 37 KRHRDRLNTELDRLASLLP---FPQDVIN---KLDKLSVLRLSVSYLRAKSFFDVSLKSS 90
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+ VQ + + + E G LL+AL GF+ VV D V + + I+ ++ +
Sbjct: 91 PADRNGVQDNCRTKFREGLNLQE--GEFLLQALNGFVLVVTTDALVFYASSTIQDYLGFQ 148
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCL 194
+ +V+ +SVY LIH D A F L
Sbjct: 149 QSDVIHQSVYELIHTEDRAEFQRQL 173
>UNIPROTKB|Q8R4S5 [details] [associations]
symbol:Ahr "Aryl hydrocarbon receptor" species:57486 "Mus
musculus molossinus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA;TAS] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006805 "xenobiotic metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=ISS] [GO:0006950 "response
to stress" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=ISS] [GO:0030850 "prostate gland development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IDA] [GO:0048608 "reproductive structure development"
evidence=IMP] [GO:0048732 "gland development" evidence=IMP]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005737
GO:GO:0006915 GO:GO:0006950 GO:GO:0004879 GO:GO:0043565
GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0007049
GO:GO:0006805 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG007313 GO:GO:0045899 GO:GO:0030850 UniGene:Mm.341377
EMBL:AF405568 ProteinModelPortal:Q8R4S5 SMR:Q8R4S5 Uniprot:Q8R4S5
Length = 883
Score = 140 (54.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-----NIKQQET 111
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R ++ + T
Sbjct: 36 KRHRDRLNTELDRLASLLP---FPQDVIN---KLDKLSVLRLSVSYLRAKSFFDVALKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVL--GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+D + G + + + L G LL+AL GF+ VV D V + + I+ ++ +
Sbjct: 90 PAD--RNGGQDQCRAQIRDWQDLQEGEFLLQALNGFVLVVTADALVFYASSTIQDYLGFQ 147
Query: 170 RQEVLGKSVYNLIHHGDHARF----HNCLVPSSHQ 200
+ +V+ +SVY LIH D A F H L P S Q
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPDSAQ 182
>UNIPROTKB|Q9Y2N7 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 Reactome:REACT_120956 GO:GO:0005829
GO:GO:0005886 GO:GO:0005654 GO:GO:0003677 GO:GO:0045944
EMBL:CH471126 GO:GO:0003700 GO:GO:0006366 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
Pathway_Interaction_DB:hif1apathway GO:GO:0061418 HSSP:Q99814
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR021537
Pfam:PF11413 EMBL:AB054067 EMBL:AF463492 EMBL:AB118749
EMBL:AB295039 EMBL:AK021653 EMBL:AK024095 EMBL:AK027725
EMBL:AK297828 EMBL:AC007193 EMBL:BC080551 IPI:IPI00164458
IPI:IPI00292048 IPI:IPI00470784 IPI:IPI00738729 IPI:IPI00746815
IPI:IPI00844043 IPI:IPI00844320 PIR:JC7771 RefSeq:NP_071907.4
RefSeq:NP_690007.1 RefSeq:NP_690008.2 UniGene:Hs.420830
ProteinModelPortal:Q9Y2N7 SMR:Q9Y2N7 STRING:Q9Y2N7
PhosphoSite:Q9Y2N7 DMDM:145558932 PRIDE:Q9Y2N7
Ensembl:ENST00000244302 Ensembl:ENST00000244303
Ensembl:ENST00000300862 Ensembl:ENST00000377670 GeneID:64344
KEGG:hsa:64344 UCSC:uc002peh.3 UCSC:uc002pel.3 CTD:64344
GeneCards:GC19P046800 HGNC:HGNC:15825 HPA:HPA041141 MIM:609976
neXtProt:NX_Q9Y2N7 PharmGKB:PA29285 eggNOG:NOG288942
InParanoid:Q9Y2N7 KO:K09096 GenomeRNAi:64344 NextBio:66283
ArrayExpress:Q9Y2N7 Bgee:Q9Y2N7 CleanEx:HS_HIF3A
Genevestigator:Q9Y2N7 Uniprot:Q9Y2N7
Length = 669
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 57/223 (25%), Positives = 97/223 (43%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RR QE + +LA + FA +S+ DK +I++ T++ +R A
Sbjct: 24 RSRRSQETEVLYQLAHTLP---FARGVSAHL---DKASIMRLTISYLR----MHRLCAAG 73
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
+ +V + E L L+ALEGF+ V+ +G + + +EN+ + S+ E++G
Sbjct: 74 EWNQVGAG------GEPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLSQLELIGH 127
Query: 177 SVYNLIHHGDHARFHNCLVP----SSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLL 232
S+++ IH D + L P S +V A T R T ++ RT N++
Sbjct: 128 SIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERC---FSLRMKSTLTSRGRTLNLKAA 184
Query: 233 ISSTHLTAGLSRAGGENGQDD-SGDVSSEGG-PCLMCVARRIP 273
+G RA Q +G SE CL+ + IP
Sbjct: 185 TWKVLNCSGHMRAYKPPAQTSPAGSPDSEPPLQCLVLICEAIP 227
>UNIPROTKB|F1P5G3 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 IPI:IPI00575691
EMBL:AADN02017717 Ensembl:ENSGALT00000027080 ArrayExpress:F1P5G3
Uniprot:F1P5G3
Length = 815
Score = 139 (54.0 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 38/154 (24%), Positives = 79/154 (51%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQ--KHNEVSAQ 65
Query: 115 AVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E+ KP+ ++NE L+LEAL+GF+ V G + + +++I + + +V
Sbjct: 66 T-EISEIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTGGSIIYVSDSITPLLGHLPCDV 124
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD 207
L +++ N + +H+ + L ++ +SD
Sbjct: 125 LDQNLLNFLPEQEHSEIYKMLSSCMLMTDSASSD 158
>UNIPROTKB|Q5ZQU2 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048511
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 HSSP:Q99814 EMBL:AF396828 EMBL:AF193071
IPI:IPI00575691 RefSeq:NP_001025713.1 UniGene:Gga.235
ProteinModelPortal:Q5ZQU2 STRING:Q5ZQU2 GeneID:395433
KEGG:gga:395433 CTD:4862 KO:K09026 NextBio:20815517 Uniprot:Q5ZQU2
Length = 815
Score = 139 (54.0 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 38/154 (24%), Positives = 79/154 (51%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQ--KHNEVSAQ 65
Query: 115 AVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E+ KP+ ++NE L+LEAL+GF+ V G + + +++I + + +V
Sbjct: 66 T-EISEIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTGGSIIYVSDSITPLLGHLPCDV 124
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD 207
L +++ N + +H+ + L ++ +SD
Sbjct: 125 LDQNLLNFLPEQEHSEIYKMLSSCMLMTDSASSD 158
>UNIPROTKB|E1BZV0 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0042745 "circadian
sleep/wake cycle" evidence=IEA] [GO:0045475 "locomotor rhythm"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:KFVGNFR EMBL:AADN02017717
IPI:IPI00823351 Ensembl:ENSGALT00000036585 ArrayExpress:E1BZV0
Uniprot:E1BZV0
Length = 817
Score = 139 (54.0 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 38/154 (24%), Positives = 79/154 (51%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 19 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQ--KHNEVSAQ 67
Query: 115 AVQQGEVSSS-KPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEV 173
+ E+ KP+ ++NE L+LEAL+GF+ V G + + +++I + + +V
Sbjct: 68 T-EISEIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTGGSIIYVSDSITPLLGHLPCDV 126
Query: 174 LGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSD 207
L +++ N + +H+ + L ++ +SD
Sbjct: 127 LDQNLLNFLPEQEHSEIYKMLSSCMLMTDSASSD 160
>ZFIN|ZDB-GENE-990714-16 [details] [associations]
symbol:ahr2 "aryl hydrocarbon receptor 2"
species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IPI]
[GO:0043565 "sequence-specific DNA binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IPI] [GO:0009410 "response to xenobiotic stimulus"
evidence=IMP;IDA;IPI] [GO:0042221 "response to chemical stimulus"
evidence=IGI;IDA;IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-990714-16 GO:GO:0005634
GO:GO:0005737 GO:GO:0009636 GO:GO:0043565 GO:GO:0045944
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 GO:GO:0009410
Gene3D:4.10.280.10 EMBL:AF063446 IPI:IPI00491298 RefSeq:NP_571339.1
UniGene:Dr.79593 ProteinModelPortal:Q9YGV3 STRING:Q9YGV3
GeneID:30517 KEGG:dre:30517 CTD:30517 HOVERGEN:HBG105620
InParanoid:Q9YGV3 NextBio:20806903 ArrayExpress:Q9YGV3
Uniprot:Q9YGV3
Length = 1027
Score = 140 (54.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 48/160 (30%), Positives = 83/160 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-------NIKQ- 108
KR R++ N+ +++L L+ F+E + + + DK ++L+ +V ++ IK+
Sbjct: 35 KRHRDRLNSELDKLTNLLP---FSEDVRA---RLDKLSVLRLSVGYLKVKSFFNATIKKT 88
Query: 109 ------QETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENI 162
+ S G+ +SS V +E G LLL+AL GF+ VV +GYV + + I
Sbjct: 89 GGNGWLNDRSGTFGGNGQTASSLDGVNFSE--GELLLQALNGFVLVVTAEGYVFYSSPTI 146
Query: 163 KSFIRYSRQEVLGKSVYNLIHHGDHARF----HNCLVPSS 198
+ ++ + + +V+ SV+ LIH D A F H L PSS
Sbjct: 147 QDYLGFHQSDVVHHSVFELIHTDDRAMFRRQLHFALNPSS 186
>UNIPROTKB|G3V6M2 [details] [associations]
symbol:Ahr "RCG61977, isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006950
"response to stress" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0009410 "response to xenobiotic
stimulus" evidence=IEA] [GO:0030850 "prostate gland development"
evidence=IEA] [GO:0030888 "regulation of B cell proliferation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:2074 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
OMA:QQLCQKM EMBL:CH473947 Ensembl:ENSRNOT00000006618 Uniprot:G3V6M2
Length = 853
Score = 139 (54.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 40/143 (27%), Positives = 74/143 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-----NIKQQET 111
KR R++ N ++ LA L+ F + + S K DK ++L+ +V+ +R ++ + T
Sbjct: 36 KRHRDRLNTELDRLASLLP---FPQDVIS---KLDKLSVLRLSVSYLRAKSFFDVALKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+D + + ++ + G LL+AL GF+ VV D V + + I+ ++ + +
Sbjct: 90 PADRSRGQDQCRAQVRDWQDLQEGEFLLQALNGFVLVVTADALVFYASSTIQDYLGFQQS 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCL 194
+V+ +SVY LIH D A F L
Sbjct: 150 DVIHQSVYELIHTEDRAEFQRQL 172
>UNIPROTKB|Q8R4S7 [details] [associations]
symbol:Ahr "Aryl hydrocarbon receptor" species:10089 "Mus
caroli" [GO:0004879 "ligand-activated sequence-specific DNA binding
RNA polymerase II transcription factor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006915 "apoptotic process" evidence=ISS] [GO:0006950 "response
to stress" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=ISS] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 MGI:MGI:105043
GO:GO:0005634 GO:GO:0005737 GO:GO:0006915 GO:GO:0006950
GO:GO:0003677 GO:GO:0004879 GO:GO:0007049 SMART:SM00086
GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG007313
EMBL:AF405564 ProteinModelPortal:Q8R4S7 Uniprot:Q8R4S7
Length = 854
Score = 139 (54.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 48/178 (26%), Positives = 86/178 (48%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-----NIKQQET 111
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R ++ + T
Sbjct: 36 KRHRDRLNTELDRLASLLP---FPQDVIN---KLDKLSVLRLSVSYLRAKSFFDVALKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVL--GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+D + G + + + L G LL+AL GF+ VV D V + + I+ ++ +
Sbjct: 90 PAD--RNGGQDQCRAQIRDWQDLQEGEFLLQALNGFVLVVTADALVFYASSTIQDYLGFQ 147
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTAS--TPNR 225
+ +V+ +SVY LIH D A F L + + S G P TA TP++
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCTDSAQGVDEAHGPPQTAVYYTPDQ 205
>ZFIN|ZDB-GENE-051018-1 [details] [associations]
symbol:ahrra "aryl-hydrocarbon receptor repressor a"
species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0042221 "response to chemical stimulus" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 ZFIN:ZDB-GENE-051018-1 GO:GO:0005634
GO:GO:0003677 GO:GO:0042221 GO:GO:0006357 GO:GO:0006351
GO:GO:0004871 Gene3D:4.10.280.10 eggNOG:NOG314160
HOVERGEN:HBG073122 EMBL:AY928203 IPI:IPI00654472
RefSeq:NP_001030342.1 UniGene:Dr.48244 ProteinModelPortal:Q3T2L3
STRING:Q3T2L3 GeneID:641291 KEGG:dre:641291 CTD:641291
NextBio:20901520 Uniprot:Q3T2L3
Length = 550
Score = 140 (54.3 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 49/176 (27%), Positives = 80/176 (45%)
Query: 39 KPDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQE 98
K A++ E N KR RE+ N +E LAEL+ F K DK ++L+
Sbjct: 20 KQKPAALMSEKSNP---SKRHRERLNAELERLAELLP---FGPDT---VCKLDKLSVLRL 70
Query: 99 TVNQIR-----NIKQQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDG 153
+V+ +R ++ QE + Q + P E LLLE+L GF VV+ DG
Sbjct: 71 SVSYLRIKSFCSVLAQENPCET-QTSKNQQDTPAACVPE--SQLLLESLAGFALVVSGDG 127
Query: 154 YVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSG 209
V + + I ++ + + +V+ ++V++ IH D F L + + N SG
Sbjct: 128 MVFYASSTIADYLGFHQTDVMHQNVFDYIHVDDRQEFRRQLHWAMNPPNPEAQSSG 183
Score = 38 (18.4 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 248 ENGQDDSGDVSSEGGPC 264
ENG G ++ GG C
Sbjct: 391 ENGSGACGRYNTHGGAC 407
>UNIPROTKB|Q99743 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0042745 "circadian sleep/wake
cycle" evidence=IEA] [GO:0045475 "locomotor rhythm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0007417 "central nervous system development" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0051879 "Hsp90 protein
binding" evidence=IDA] Reactome:REACT_111217 InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005829
GO:GO:0044281 GO:GO:0003677 GO:GO:0045944 GO:GO:0007417
GO:GO:0003700 GO:GO:0044255 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 MIM:608516 GO:GO:0045475 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0051879
Pathway_Interaction_DB:circadianpathway Reactome:REACT_24941
eggNOG:NOG300360 HOVERGEN:HBG050997 CTD:4862 KO:K09026 EMBL:U77970
EMBL:AC016738 EMBL:AC092168 EMBL:AC106891 EMBL:BC051351
EMBL:BC072383 EMBL:U51625 IPI:IPI00956556 RefSeq:NP_002509.2
UniGene:Hs.156832 UniGene:Hs.705895 ProteinModelPortal:Q99743
SMR:Q99743 IntAct:Q99743 STRING:Q99743 PhosphoSite:Q99743
DMDM:311033423 PaxDb:Q99743 PRIDE:Q99743 Ensembl:ENST00000335681
GeneID:4862 KEGG:hsa:4862 UCSC:uc002tap.1 GeneCards:GC02P101436
H-InvDB:HIX0200274 HGNC:HGNC:7895 HPA:HPA019674 MIM:603347
neXtProt:NX_Q99743 PharmGKB:PA31696 InParanoid:Q99743
OrthoDB:EOG444KJQ PhylomeDB:Q99743 ChiTaRS:NPAS2 GenomeRNAi:4862
NextBio:18730 ArrayExpress:Q99743 Bgee:Q99743 CleanEx:HS_NPAS2
Genevestigator:Q99743 GermOnline:ENSG00000170485 GO:GO:0042745
Uniprot:Q99743
Length = 824
Score = 144 (55.7 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 38/147 (25%), Positives = 76/147 (51%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 17 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQ--KHNEVSAQ 65
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
KP+ ++NE L+LEAL+GF+ V DG + + +++I + + +V+
Sbjct: 66 TEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSIIYVSDSITPLLGHLPSDVM 125
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
+++ N + +H+ + L SSH +
Sbjct: 126 DQNLLNFLPEQEHSEVYKIL--SSHML 150
Score = 37 (18.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 196 PSSHQVNAWTSDSG----GQAGKRPSLTASTPN 224
P +H N+ ++ GQA PS AS P+
Sbjct: 715 PDAHPANSSSAPMPVLLMGQAVLHPSFPASQPS 747
Score = 37 (18.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 12/60 (20%), Positives = 29/60 (48%)
Query: 273 PPTDKQLSAPIEQFTMKLD--RSGTIIGMDTSGVSQTHTQYLNKAVACKTSATVWTCPNS 330
PP++ S+ ++ L+ + + + SG++ +H+ + + K+S T + P S
Sbjct: 369 PPSEALHSSALKDKGSSLEPRQHFNTLDVGASGLNTSHSPSASSRSSHKSSHTAMSEPTS 428
>RGD|70332 [details] [associations]
symbol:Hif3a "hypoxia inducible factor 3, alpha subunit"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEA;ISO;TAS] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:70332
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0001666
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 HSSP:Q99814
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR021537
Pfam:PF11413 CTD:64344 eggNOG:NOG288942 KO:K09096 EMBL:AJ277827
IPI:IPI00199807 RefSeq:NP_071973.1 UniGene:Rn.161814
ProteinModelPortal:Q9JHS2 STRING:Q9JHS2 PhosphoSite:Q9JHS2
PRIDE:Q9JHS2 GeneID:64345 KEGG:rno:64345 UCSC:RGD:70332
InParanoid:Q9JHS2 NextBio:613008 ArrayExpress:Q9JHS2
Genevestigator:Q9JHS2 Uniprot:Q9JHS2
Length = 662
Score = 136 (52.9 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 54/220 (24%), Positives = 95/220 (43%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RR QE + +LA + FA +S+ DK +I++ T++ +R +
Sbjct: 22 RSRRSQETEVLYQLAHTLP---FARGVSAHL---DKASIMRLTISYLRMHR-------LC 68
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
GE + + E L L+ALEGF+ V+ +G + + +EN+ + S+ E++G
Sbjct: 69 AAGEWNQVRKE---GEPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLSQLELIGH 125
Query: 177 SVYNLIHHGDHARFHNCLVPS-SHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISS 235
S+++ IH D + L P S + +G R T ++ R N++
Sbjct: 126 SIFDFIHPCDQEELQDALTPRPSLSKKKSEAATGRHFSLRMKSTLTSRGRALNLKAATWK 185
Query: 236 THLTAGLSRAGGENGQDD-SGDVSSEGG-PCLMCVARRIP 273
+G RA Q +G SE CL+ + IP
Sbjct: 186 VLHCSGHMRAYKPPAQTSPAGSPRSEPPLQCLVLICEAIP 225
>UNIPROTKB|Q9JHS2 [details] [associations]
symbol:Hif3a "Hypoxia-inducible factor 3-alpha"
species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:70332 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0001666 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 HSSP:Q99814 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR021537 Pfam:PF11413 CTD:64344 eggNOG:NOG288942
KO:K09096 EMBL:AJ277827 IPI:IPI00199807 RefSeq:NP_071973.1
UniGene:Rn.161814 ProteinModelPortal:Q9JHS2 STRING:Q9JHS2
PhosphoSite:Q9JHS2 PRIDE:Q9JHS2 GeneID:64345 KEGG:rno:64345
UCSC:RGD:70332 InParanoid:Q9JHS2 NextBio:613008 ArrayExpress:Q9JHS2
Genevestigator:Q9JHS2 Uniprot:Q9JHS2
Length = 662
Score = 136 (52.9 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 54/220 (24%), Positives = 95/220 (43%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RR QE + +LA + FA +S+ DK +I++ T++ +R +
Sbjct: 22 RSRRSQETEVLYQLAHTLP---FARGVSAHL---DKASIMRLTISYLRMHR-------LC 68
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
GE + + E L L+ALEGF+ V+ +G + + +EN+ + S+ E++G
Sbjct: 69 AAGEWNQVRKE---GEPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLSQLELIGH 125
Query: 177 SVYNLIHHGDHARFHNCLVPS-SHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISS 235
S+++ IH D + L P S + +G R T ++ R N++
Sbjct: 126 SIFDFIHPCDQEELQDALTPRPSLSKKKSEAATGRHFSLRMKSTLTSRGRALNLKAATWK 185
Query: 236 THLTAGLSRAGGENGQDD-SGDVSSEGG-PCLMCVARRIP 273
+G RA Q +G SE CL+ + IP
Sbjct: 186 VLHCSGHMRAYKPPAQTSPAGSPRSEPPLQCLVLICEAIP 225
>RGD|620230 [details] [associations]
symbol:Arntl2 "aryl hydrocarbon receptor nuclear
translocator-like 2" species:10116 "Rattus norvegicus" [GO:0000982
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IEP;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:620230 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 HOVERGEN:HBG107503 IPI:IPI00781061
EMBL:AF327071 UniGene:Rn.41612 ProteinModelPortal:Q924H3
Genevestigator:Q924H3 Uniprot:Q924H3
Length = 565
Score = 135 (52.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 39/135 (28%), Positives = 76/135 (56%)
Query: 56 EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDA 115
EKRRR++ N+ I +L+ +I A K DK ++L+ V +R+ Q ++
Sbjct: 50 EKRRRDKMNHLIWKLSSMIPPHI------PTAHKLDKLSVLRRAVQYLRS---QRGMTE- 99
Query: 116 VQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDG-YVNFCTENIKSFIRYSRQEVL 174
GE ++KP+ I ++ L L+L+A EGFL VV +G + F ++++ + Y + ++
Sbjct: 100 FYLGE--NAKPSFIQDKELSHLILKAAEGFLLVVGCEGGRILFVSKSVSKTLHYDQASLM 157
Query: 175 GKSVYNLIHHGDHAR 189
G+++++ +H D A+
Sbjct: 158 GQNLFDFLHPKDVAK 172
>UNIPROTKB|Q8R4S2 [details] [associations]
symbol:Ahr "Aryl hydrocarbon receptor" species:10096 "Mus
spretus" [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0006915 "apoptotic process" evidence=ISS]
[GO:0006950 "response to stress" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0009410 "response to xenobiotic stimulus"
evidence=ISS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISS] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005634 GO:GO:0005737
GO:GO:0006915 GO:GO:0006950 GO:GO:0003677 GO:GO:0004879
GO:GO:0007049 SMART:SM00086 GO:GO:0009410 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG007313 EMBL:AF405571
ProteinModelPortal:Q8R4S2 PRIDE:Q8R4S2 Uniprot:Q8R4S2
Length = 854
Score = 137 (53.3 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 41/145 (28%), Positives = 75/145 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-----NIKQQET 111
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R ++ + T
Sbjct: 36 KRHRDRLNTELDRLASLLP---FPQDVIN---KLDKLSVLRLSVSYLRAKSFFDVALKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVL--GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+D + G + + + L G LL+AL GF+ VV D V + + I+ ++ +
Sbjct: 90 PAD--RNGGQDQCRAQIRDWQNLQEGEFLLQALNGFVLVVTADALVFYASSTIQDYLGFQ 147
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCL 194
+ +V+ +SVY LIH D A F L
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQL 172
>UNIPROTKB|Q8R4S4 [details] [associations]
symbol:Ahr "Aryl hydrocarbon receptor" species:10103 "Mus
spicilegus" [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0006915 "apoptotic process" evidence=ISS]
[GO:0006950 "response to stress" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0009410 "response to xenobiotic stimulus"
evidence=ISS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISS] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:105043 GO:GO:0005634 GO:GO:0005737
GO:GO:0006915 GO:GO:0006950 GO:GO:0003677 GO:GO:0004879
GO:GO:0007049 SMART:SM00086 GO:GO:0009410 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG007313 EMBL:AF405569
ProteinModelPortal:Q8R4S4 Uniprot:Q8R4S4
Length = 854
Score = 137 (53.3 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 41/145 (28%), Positives = 75/145 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-----NIKQQET 111
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R ++ + T
Sbjct: 36 KRHRDRLNTELDRLASLLP---FPQDVIN---KLDKLSVLRLSVSYLRAKSFFDVALKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVL--GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+D + G + + + L G LL+AL GF+ VV D V + + I+ ++ +
Sbjct: 90 PAD--RNGGQDQCRAQIRDWQDLQEGEFLLQALNGFVLVVTADALVFYASSTIQDYLGFQ 147
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCL 194
+ +V+ +SVY LIH D A F L
Sbjct: 148 QSDVIHQSVYELIHTEDRAEFQRQL 172
>UNIPROTKB|F5H027 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC016738 EMBL:AC092168 EMBL:AC106891
HGNC:HGNC:7895 ChiTaRS:NPAS2 IPI:IPI00916781
ProteinModelPortal:F5H027 SMR:F5H027 Ensembl:ENST00000542504
UCSC:uc010yvt.1 OMA:KFVGNFR ArrayExpress:F5H027 Bgee:F5H027
Uniprot:F5H027
Length = 889
Score = 144 (55.7 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 38/147 (25%), Positives = 76/147 (51%)
Query: 55 NEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSD 114
+EK+RR+Q N I+EL+ ++ + K DK +L++ + ++ K E S+
Sbjct: 82 SEKKRRDQFNVLIKELSSMLPGNTR---------KMDKTTVLEKVIGFLQ--KHNEVSAQ 130
Query: 115 AVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVL 174
KP+ ++NE L+LEAL+GF+ V DG + + +++I + + +V+
Sbjct: 131 TEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSIIYVSDSITPLLGHLPSDVM 190
Query: 175 GKSVYNLIHHGDHARFHNCLVPSSHQV 201
+++ N + +H+ + L SSH +
Sbjct: 191 DQNLLNFLPEQEHSEVYKIL--SSHML 215
Score = 37 (18.1 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 196 PSSHQVNAWTSDSG----GQAGKRPSLTASTPN 224
P +H N+ ++ GQA PS AS P+
Sbjct: 780 PDAHPANSSSAPMPVLLMGQAVLHPSFPASQPS 812
Score = 37 (18.1 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 12/60 (20%), Positives = 29/60 (48%)
Query: 273 PPTDKQLSAPIEQFTMKLD--RSGTIIGMDTSGVSQTHTQYLNKAVACKTSATVWTCPNS 330
PP++ S+ ++ L+ + + + SG++ +H+ + + K+S T + P S
Sbjct: 434 PPSEALHSSALKDKGSSLEPRQHFNTLDVGASGLNTSHSPSASSRSSHKSSHTAMSEPTS 493
>MGI|MGI:1859778 [details] [associations]
symbol:Hif3a "hypoxia inducible factor 3, alpha subunit"
species:10090 "Mus musculus" [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IPI] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IC] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IPI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IPI]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:1859778 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006366
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
EMBL:AC148976 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR021537 Pfam:PF11413 GeneTree:ENSGT00650000093281
CTD:64344 eggNOG:NOG288942 KO:K09096 EMBL:AF060194 EMBL:AH008971
EMBL:AF416641 EMBL:BC120587 EMBL:AK144472 IPI:IPI00131181
IPI:IPI00621179 RefSeq:NP_058564.2 UniGene:Mm.135110
ProteinModelPortal:Q0VBL6 SMR:Q0VBL6 STRING:Q0VBL6
PhosphoSite:Q0VBL6 PRIDE:Q0VBL6 Ensembl:ENSMUST00000037762
GeneID:53417 KEGG:mmu:53417 UCSC:uc009fir.2 UCSC:uc009fit.2
OrthoDB:EOG4BVRT7 NextBio:310241 Bgee:Q0VBL6 CleanEx:MM_HIF3A
Genevestigator:Q0VBL6 Uniprot:Q0VBL6
Length = 662
Score = 135 (52.6 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 53/220 (24%), Positives = 94/220 (42%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RR QE + +LA + FA +S+ DK +I++ T++ +R A
Sbjct: 22 RSRRSQETEVLYQLAHTLP---FARGVSAHL---DKASIMRLTISYLR----MHRLCAAG 71
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
+ +V E L L+ALEGF+ V+ +G + + +EN+ + S+ E++G
Sbjct: 72 EWNQVEKG------GEPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLSQLELIGH 125
Query: 177 SVYNLIHHGDHARFHNCLVPSSH-QVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISS 235
S+++ IH D + L P + + + R T ++ RT N++
Sbjct: 126 SIFDFIHPCDQEELQDALTPRPNLSKKKLEAPTERHFSLRMKSTLTSRGRTLNLKAATWK 185
Query: 236 THLTAGLSRAGGENGQDD-SGDVSSEGG-PCLMCVARRIP 273
+G RA Q +G SE CL+ + IP
Sbjct: 186 VLHCSGHMRAYKPPAQTSPAGSPRSEPPLQCLVLICEAIP 225
>UNIPROTKB|E2QWU8 [details] [associations]
symbol:AHR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
CTD:196 KO:K09093 OMA:QQLCQKM EMBL:AAEX03009350 RefSeq:XP_532485.2
Ensembl:ENSCAFT00000003863 GeneID:475251 KEGG:cfa:475251
Uniprot:E2QWU8
Length = 853
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/143 (27%), Positives = 70/143 (48%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR--NIKQQETSSD 114
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R + S
Sbjct: 37 KRHRDRLNTELDRLASLLP---FPQDVIN---KLDKLSVLRLSVSYLRAKSFFDVALQSS 90
Query: 115 AVQQGEVSSSKPTVITNEVL---GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+ EV + T + G LL+AL GF+ VV D V + + I+ ++ + +
Sbjct: 91 PTDRNEVQENCRTKFREGLHLQEGEFLLQALNGFVLVVTTDALVFYASSTIQDYLGFQQS 150
Query: 172 EVLGKSVYNLIHHGDHARFHNCL 194
+V+ +SVY LIH D F L
Sbjct: 151 DVIHQSVYELIHTEDRGEFQRQL 173
>RGD|2074 [details] [associations]
symbol:Ahr "aryl hydrocarbon receptor" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0001541 "ovarian follicle
development" evidence=IMP] [GO:0001568 "blood vessel development"
evidence=ISO] [GO:0001569 "patterning of blood vessels" evidence=ISO]
[GO:0001782 "B cell homeostasis" evidence=ISO] [GO:0001889 "liver
development" evidence=ISO] [GO:0001974 "blood vessel remodeling"
evidence=ISO] [GO:0002260 "lymphocyte homeostasis" evidence=ISO]
[GO:0002376 "immune system process" evidence=ISO] [GO:0003085
"negative regulation of systemic arterial blood pressure"
evidence=ISO] [GO:0003214 "cardiac left ventricle morphogenesis"
evidence=ISO] [GO:0003243 "circumferential growth involved in left
ventricle morphogenesis" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;TAS] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0004874 "aryl
hydrocarbon receptor activity" evidence=IDA;TAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0006915 "apoptotic process" evidence=ISO;TAS]
[GO:0006950 "response to stress" evidence=ISO;IDA] [GO:0007049 "cell
cycle" evidence=ISO;TAS] [GO:0008015 "blood circulation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0009410 "response to xenobiotic stimulus"
evidence=ISO;IDA;TAS] [GO:0009636 "response to toxic substance"
evidence=ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0014070 "response to organic cyclic compound"
evidence=IEP;IMP] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISO;IDA;TAS] [GO:0030850 "prostate gland
development" evidence=ISO] [GO:0030888 "regulation of B cell
proliferation" evidence=ISO] [GO:0032355 "response to estradiol
stimulus" evidence=IEP] [GO:0035162 "embryonic hemopoiesis"
evidence=ISO] [GO:0035166 "post-embryonic hemopoiesis" evidence=ISO]
[GO:0040010 "positive regulation of growth rate" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=ISO] [GO:0043029
"T cell homeostasis" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISO] [GO:0045793 "positive regulation of cell
size" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation complex
assembly" evidence=ISO] [GO:0045906 "negative regulation of
vasoconstriction" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048514 "blood vessel
morphogenesis" evidence=ISO] [GO:0048536 "spleen development"
evidence=ISO] [GO:0048608 "reproductive structure development"
evidence=ISO] [GO:0048732 "gland development" evidence=ISO]
[GO:0048745 "smooth muscle tissue development" evidence=ISO]
[GO:0050880 "regulation of blood vessel size" evidence=ISO]
[GO:0051879 "Hsp90 protein binding" evidence=ISO] [GO:0060547
"negative regulation of necrotic cell death" evidence=ISO]
[GO:0060841 "venous blood vessel development" evidence=ISO]
[GO:0060993 "kidney morphogenesis" evidence=ISO] [GO:0061009 "common
bile duct development" evidence=ISO] [GO:0071320 "cellular response
to cAMP" evidence=ISO] [GO:0071385 "cellular response to
glucocorticoid stimulus" evidence=IEP] [GO:0072102 "glomerulus
morphogenesis" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:2074 GO:GO:0005829 GO:GO:0005634
GO:GO:0006915 GO:GO:0006950 GO:GO:0032355 GO:GO:0003677 GO:GO:0004879
GO:GO:0043565 GO:GO:0071385 GO:GO:0003705 GO:GO:0000122 GO:GO:0044212
GO:GO:0007049 GO:GO:0001541 SMART:SM00086 GO:GO:0009410
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG253623 GO:GO:0004874
CTD:196 HOGENOM:HOG000252935 HOVERGEN:HBG007313 KO:K09093
OrthoDB:EOG42BX7X GO:GO:0045899 GO:GO:0030850 GO:GO:0030888
EMBL:U09000 EMBL:U04860 EMBL:AF082124 EMBL:AF082125 EMBL:AF082126
IPI:IPI00231916 IPI:IPI00364957 PIR:S58375 RefSeq:NP_037281.2
UniGene:Rn.91370 ProteinModelPortal:P41738 IntAct:P41738
STRING:P41738 PhosphoSite:P41738 PRIDE:P41738 GeneID:25690
KEGG:rno:25690 UCSC:RGD:2074 InParanoid:P41738 BindingDB:P41738
ChEMBL:CHEMBL5400 NextBio:607689 ArrayExpress:P41738
Genevestigator:P41738 GermOnline:ENSRNOG00000004342 Uniprot:P41738
Length = 853
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/143 (27%), Positives = 74/143 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR-----NIKQQET 111
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R ++ + T
Sbjct: 36 KRHRDRLNTELDRLASLLP---FPQDVIN---KLDKLSVLRLSVSYLRAKSFFDVALKST 89
Query: 112 SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQ 171
+D + + ++ + G LL+AL GF+ VV D V + + I+ ++ + +
Sbjct: 90 PADRSRGQDQCRAQVRDWQDLQEGEFLLQALNGFVLVVTADALVFYASSTIQDYLGFQQS 149
Query: 172 EVLGKSVYNLIHHGDHARFHNCL 194
+V+ +SVY LIH D A F L
Sbjct: 150 DVIHQSVYELIHTEDRAEFQRQL 172
>UNIPROTKB|F1ML85 [details] [associations]
symbol:AHR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0030888 "regulation of B cell proliferation"
evidence=IEA] [GO:0030850 "prostate gland development"
evidence=IEA] [GO:0009410 "response to xenobiotic stimulus"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0006950 GO:GO:0004879
GO:GO:0043565 GO:GO:0003705 GO:GO:0000122 GO:GO:0044212
SMART:SM00086 GO:GO:0009410 Gene3D:4.10.280.10
GeneTree:ENSGT00700000104038 CTD:196 KO:K09093 OMA:QQLCQKM
GO:GO:0045899 GO:GO:0030850 GO:GO:0030888 EMBL:DAAA02010042
IPI:IPI00692346 RefSeq:NP_001192955.1 UniGene:Bt.13046 PRIDE:F1ML85
Ensembl:ENSBTAT00000010187 GeneID:280714 KEGG:bta:280714
NextBio:20804893 ArrayExpress:F1ML85 Uniprot:F1ML85
Length = 844
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRN-------IKQQ 109
KR R++ N ++ LA L+ F + + K DK ++L+ +V+ +R +K
Sbjct: 37 KRHRDRLNTELDRLASLLP---FPPDVIN---KLDKLSVLRLSVSYLRAKSFFDVALKSS 90
Query: 110 ETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
+ VQ + + + E G LL+AL GF+ VV D V + + I+ ++ +
Sbjct: 91 PADRNGVQDNCRTKFREGLNLQE--GEFLLQALNGFVLVVTTDALVFYASSTIQDYLGFQ 148
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCL 194
+ +V+ +SVY LIH D A F L
Sbjct: 149 QSDVIHQSVYELIHTEDRAEFQRQL 173
>UNIPROTKB|P35869 [details] [associations]
symbol:AHR "Aryl hydrocarbon receptor" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0030850 "prostate gland
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA;TAS]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0030888 "regulation of B cell
proliferation" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001568 "blood
vessel development" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=TAS] [GO:0046983 "protein
dimerization activity" evidence=TAS] [GO:0034752 "cytosolic aryl
hydrocarbon receptor complex" evidence=TAS] [GO:0005667
"transcription factor complex" evidence=TAS] [GO:0006805
"xenobiotic metabolic process" evidence=TAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IDA]
[GO:0007049 "cell cycle" evidence=TAS] [GO:0006915 "apoptotic
process" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0006950 "response to
stress" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0051879 "Hsp90 protein binding" evidence=IDA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0006915 GO:GO:0006950
GO:GO:0032355 EMBL:CH471073 GO:GO:0004879 GO:GO:0043565
GO:GO:0071385 EMBL:CH236948 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 GO:GO:0044212 GO:GO:0007049 GO:GO:0006805
GO:GO:0001541 GO:GO:0046982 SMART:SM00086 GO:GO:0001568
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG253623 EMBL:D16354
EMBL:L19872 EMBL:AC003075 EMBL:BC069390 EMBL:BC070080 EMBL:U28063
EMBL:U27656 EMBL:U27657 EMBL:U28060 EMBL:U28061 EMBL:U28062
EMBL:U28064 EMBL:U28066 EMBL:U28065 EMBL:D38044 IPI:IPI00021008
PIR:S59514 RefSeq:NP_001612.1 UniGene:Hs.171189 DisProt:DP00381
ProteinModelPortal:P35869 SMR:P35869 DIP:DIP-946N IntAct:P35869
STRING:P35869 PhosphoSite:P35869 DMDM:3041653 PaxDb:P35869
PRIDE:P35869 Ensembl:ENST00000242057 Ensembl:ENST00000463496
GeneID:196 KEGG:hsa:196 UCSC:uc011jxz.1 CTD:196
GeneCards:GC07P017304 HGNC:HGNC:348 HPA:CAB005072 HPA:HPA029722
HPA:HPA029723 MIM:600253 neXtProt:NX_P35869 PharmGKB:PA24641
HOGENOM:HOG000252935 HOVERGEN:HBG007313 InParanoid:P35869 KO:K09093
OMA:QQLCQKM OrthoDB:EOG42BX7X PhylomeDB:P35869 BindingDB:P35869
ChEMBL:CHEMBL3201 ChiTaRS:AHR GenomeRNAi:196 NextBio:786
Bgee:P35869 CleanEx:HS_AHR Genevestigator:P35869 GO:GO:0034752
GO:GO:0051879 GO:GO:0045899 GO:GO:0030850 GO:GO:0030888
Uniprot:P35869
Length = 848
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 41/146 (28%), Positives = 73/146 (50%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRN-------IKQQ 109
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R +K
Sbjct: 37 KRHRDRLNTELDRLASLLP---FPQDVIN---KLDKLSVLRLSVSYLRAKSFFDVALKSS 90
Query: 110 ETSSDAVQQG-EVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
T + Q ++ + + E G LL+AL GF+ VV D V + + I+ ++ +
Sbjct: 91 PTERNGGQDNCRAANFREGLNLQE--GEFLLQALNGFVLVVTTDALVFYASSTIQDYLGF 148
Query: 169 SRQEVLGKSVYNLIHHGDHARFHNCL 194
+ +V+ +SVY LIH D A F L
Sbjct: 149 QQSDVIHQSVYELIHTEDRAEFQRQL 174
>UNIPROTKB|E9PLC8 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR013767
Pfam:PF00989 PROSITE:PS50112 SMART:SM00091 GO:GO:0006355
GO:GO:0004871 TIGRFAMs:TIGR00229 EMBL:AC007193 HGNC:HGNC:15825
IPI:IPI00976505 ProteinModelPortal:E9PLC8 SMR:E9PLC8
Ensembl:ENST00000533145 ArrayExpress:E9PLC8 Bgee:E9PLC8
Uniprot:E9PLC8
Length = 148
Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 132 EVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFH 191
E L L+ALEGF+ V+ +G + + +EN+ + S+ E++G S+++ IH D
Sbjct: 75 EPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLSQLELIGHSIFDFIHPCDQEELQ 134
Query: 192 NCLVP 196
+ L P
Sbjct: 135 DALTP 139
>UNIPROTKB|F1RM22 [details] [associations]
symbol:HIF3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005886
GO:GO:0005737 GO:GO:0003677 GO:GO:0001666 GO:GO:0003700
GO:GO:0005667 GO:GO:0006366 GO:GO:0004871 SMART:SM00086
InterPro:IPR021537 Pfam:PF11413 GeneTree:ENSGT00650000093281
OMA:APILDGT EMBL:FP565329 Ensembl:ENSSSCT00000003440 Uniprot:F1RM22
Length = 670
Score = 130 (50.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 57/232 (24%), Positives = 97/232 (41%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RR QE EL +L FA +S+ DK +I++ T++ +R A
Sbjct: 24 RSRRSQET----ELYQLAHTLPFARGVSAHL---DKASIMRLTISYLR----MHRLCAAG 72
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
+ +V + E L L+ALEGF+ V+ +G + + +EN+ + S+ E++G
Sbjct: 73 EWNQVGAG------GEPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLSQLELIGH 126
Query: 177 SVYNLIHHGDHARFHNCLVP-SSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISS 235
S+++ IH D + L P S + + R T ++ RT N++
Sbjct: 127 SIFDFIHPCDQEELQDALTPRQSLSKKKPEAPTERCFSLRMKSTLTSRGRTLNLKAATWK 186
Query: 236 THLTAGLSRAGGENGQDD-SGDVSSEGGP---CLMCVARRIPPTDKQLSAPI 283
+G RA Q +G P CL+ + IP D L P+
Sbjct: 187 VLHCSGHMRAYKPPSQTSPAGSPGPNLEPPLQCLVLICEAIPHPDS-LEPPL 237
>ZFIN|ZDB-GENE-041210-5 [details] [associations]
symbol:sim1b "single-minded homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR010578 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF06621
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-041210-5 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 eggNOG:NOG310284
HOGENOM:HOG000236298 EMBL:BX649468 OrthoDB:EOG4QC14V EMBL:FJ654702
IPI:IPI00929984 RefSeq:NP_001153057.1 UniGene:Dr.155154
Ensembl:ENSDART00000023483 GeneID:566656 KEGG:dre:566656 CTD:566656
NextBio:20888303 Uniprot:C1JIE2
Length = 586
Score = 129 (50.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 40/147 (27%), Positives = 74/147 (50%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVN--QIRNIKQQETSSD 114
+ RRE+EN+ ELA+++ S ++ + DK +I++ T + ++R + Q
Sbjct: 10 RTRREKENSEFYELAKMLPLPS------AITSQLDKASIIRLTSSYLKMRLVFPQGLGEV 63
Query: 115 AVQQGEVSSSK-PT-VITNEVLGPLL---LEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
Q G S + P+ + + +L ++ L+ L+GF+FVV DG + + +E + S
Sbjct: 64 WGQAGRTRSGENPSHELGSHLLQVIISKMLQTLDGFIFVVAADGKIMYISETASVHLGLS 123
Query: 170 RQEVLGKSVYNLIHHGDHARFHNCLVP 196
+ E+ G S+Y +H DH L P
Sbjct: 124 QVELTGNSIYEYVHPADHDEMAAVLTP 150
>UNIPROTKB|E5RFG4 [details] [associations]
symbol:AHRR "Aryl hydrocarbon receptor repressor"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0000122
GO:GO:0004871 Gene3D:4.10.280.10 EMBL:AC010442 EMBL:AC118458
HGNC:HGNC:346 GO:GO:0033235 IPI:IPI00982017
ProteinModelPortal:E5RFG4 SMR:E5RFG4 Ensembl:ENST00000510400
ArrayExpress:E5RFG4 Bgee:E5RFG4 Uniprot:E5RFG4
Length = 157
Score = 111 (44.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 38/131 (29%), Positives = 69/131 (52%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ-----QET 111
KR R++ N ++ LA L+ F + S K DK ++L+ +V+ +R +K QE
Sbjct: 34 KRHRDRLNAELDHLASLLP---FPPDIIS---KLDKLSVLRLSVSYLR-VKSFFQVVQEQ 86
Query: 112 SSDAVQQGEVS--SSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
SS G S S P + + G LLLE+L GF VV+ +G + + + I ++ +
Sbjct: 87 SSRQPAAGAPSPGDSCPLAGSAVLEGRLLLESLNGFALVVSAEGTIFYASATIVDYLGFH 146
Query: 170 RQEVLGKSVYN 180
+ +V+ +++Y+
Sbjct: 147 QTDVMHQNIYD 157
>UNIPROTKB|F8VR32 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
HGNC:HGNC:19311 EMBL:AL109769 EMBL:AL133305 EMBL:AL139296
EMBL:AL157689 EMBL:AL158802 EMBL:AL161851 EMBL:AL355886
IPI:IPI01021176 ProteinModelPortal:F8VR32 SMR:F8VR32
Ensembl:ENST00000551492 OMA:FENPKAA ArrayExpress:F8VR32 Bgee:F8VR32
Uniprot:F8VR32
Length = 938
Score = 132 (51.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 46/187 (24%), Positives = 87/187 (46%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR------------ 104
+ RR +EN ELA+L+ A S L DK +I++ T++ ++
Sbjct: 68 RSRRGKENFEFYELAKLLPLP--AAITSQL----DKASIIRLTISYLKMRDFANQGDPPW 121
Query: 105 NIKQQETSSDAVQQGEVSSSKPTVITNEV----LGPLLLEALEGFLFVVNPDGYVNFCTE 160
N++ + + +G P+ + EV LG +L++L+GF+F +N +G + +E
Sbjct: 122 NLRMEGPPPNTSVKGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYISE 181
Query: 161 NIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCL----VPSSHQVNAWTSDSGGQAGKRP 216
+ ++ S+ E+ G SV++ +H GDH L P ++ T++ G +
Sbjct: 182 TVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSS 241
Query: 217 SLTASTP 223
S + TP
Sbjct: 242 S-QSETP 247
Score = 43 (20.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 300 DTSGVSQTHTQYLNKAVACKTSATVWTCPN 329
D G+ +H LNK C T W N
Sbjct: 379 DVEGIRHSHLDLLNKG-QCVTKYYRWMQKN 407
>UNIPROTKB|E1C4K6 [details] [associations]
symbol:LOC424033 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 EMBL:AADN02034423 EMBL:AADN02034424
IPI:IPI00812541 Ensembl:ENSGALT00000008831 OMA:CMERNFT
Uniprot:E1C4K6
Length = 755
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 21/57 (36%), Positives = 38/57 (66%)
Query: 135 GPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFH 191
G LLL+AL GF+ V DGY+ + + +++++ + + +++ +S+Y LIH D A FH
Sbjct: 109 GDLLLQALNGFVITVTADGYIFYISPTVQNYLGFHQSDLIYQSIYELIHKDDRAAFH 165
>UNIPROTKB|A7Z028 [details] [associations]
symbol:HIF3A "HIF3A protein" species:9913 "Bos taurus"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0001666 GO:GO:0003700 GO:GO:0006366 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR021537
Pfam:PF11413 GeneTree:ENSGT00650000093281 CTD:64344
eggNOG:NOG288942 KO:K09096 OrthoDB:EOG4BVRT7 EMBL:DAAA02047392
EMBL:BC153226 IPI:IPI00695039 RefSeq:NP_001098812.1
UniGene:Bt.43927 Ensembl:ENSBTAT00000025217 GeneID:507699
KEGG:bta:507699 InParanoid:A7Z028 OMA:APILDGT NextBio:20868183
Uniprot:A7Z028
Length = 669
Score = 128 (50.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 53/220 (24%), Positives = 98/220 (44%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RR QE + +LA + FA +S+ DK +I++ T++ +R + + T+ +
Sbjct: 24 RSRRSQETEVLYQLAHTLP---FARGVSAHL---DKASIMRLTISYLR-MHRLCTAGEWN 76
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
Q G + +P L L+ALEGF+ V+ +G + + +EN+ + S+ E++G
Sbjct: 77 QVG--AGGEP-------LDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLSQLELIGH 127
Query: 177 SVYNLIHHGDHARFHNCLVP-SSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISS 235
++++ IH D + L P S + + R T S+ RT N++
Sbjct: 128 NIFDFIHPCDQEELQDALTPRQSLSKKKPEAPTERCFSLRMKSTLSSRGRTLNLKAATWK 187
Query: 236 THLTAGLSRAGGENGQDD-SGDVSSEGG-PCLMCVARRIP 273
+G R Q +G + E CL+ + IP
Sbjct: 188 VLHCSGHMRVYKPPAQTSPAGSPNLEPPLQCLVLICEAIP 227
>UNIPROTKB|C9J9N2 [details] [associations]
symbol:EPAS1 "Endothelial PAS domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0002027 "regulation of heart rate" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0042415 "norepinephrine metabolic process" evidence=IEA]
[GO:0043129 "surfactant homeostasis" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0048625 "myoblast cell fate
commitment" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00989 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005737 GO:GO:0030324 GO:GO:0007601 GO:GO:0043565
GO:GO:0001666 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0004871 GO:GO:0001974 GO:GO:0030218 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027 GO:GO:0001892
GO:GO:0043619 GO:GO:0042415 GO:GO:0048469 GO:GO:0043129
HGNC:HGNC:3374 ChiTaRS:EPAS1 GO:GO:0048625 HOGENOM:HOG000236298
EMBL:AC016696 EMBL:AC016912 IPI:IPI00917611
ProteinModelPortal:C9J9N2 SMR:C9J9N2 STRING:C9J9N2
Ensembl:ENST00000449347 ArrayExpress:C9J9N2 Bgee:C9J9N2
Uniprot:C9J9N2
Length = 259
Score = 121 (47.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQ 118
RR +E ELA + S+SS DK +I++ ++ +R K S +
Sbjct: 26 RRSKETEVFYELAHELP---LPHSVSSHL---DKASIMRLAISFLRTHK---LLSSVCSE 76
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
E + + N L L+ALEGF+ VV DG + F +ENI F+ ++ E+ G S+
Sbjct: 77 NESEAEADQQMDN-----LYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSI 131
Query: 179 YNLIHHGDHARFH-NCLVPSSHQVNAWTSDSGGQAG--KRPSLTASTPNRTFNIR 230
++ H DH N + + + D + R T + RT N++
Sbjct: 132 FDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRTVNLK 186
>MGI|MGI:1351610 [details] [associations]
symbol:Npas3 "neuronal PAS domain protein 3" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007610 "behavior" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0035176 "social behavior" evidence=IMP]
[GO:0042711 "maternal behavior" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 MGI:MGI:1351610 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0003677 GO:GO:0007626 GO:GO:0006351
GO:GO:0004871 GO:GO:0035176 SMART:SM00086 SUPFAM:SSF47459
GO:GO:0042711 eggNOG:NOG287666 OrthoDB:EOG4M0F1J HOVERGEN:HBG052656
EMBL:AF173871 EMBL:AF168769 IPI:IPI00137835 UniGene:Mm.247044
UniGene:Mm.466545 ProteinModelPortal:Q9QZQ0 SMR:Q9QZQ0
STRING:Q9QZQ0 PhosphoSite:Q9QZQ0 PRIDE:Q9QZQ0 UCSC:uc007nno.1
HOGENOM:HOG000113836 InParanoid:Q9QZQ0 CleanEx:MM_NPAS3
Genevestigator:Q9QZQ0 GermOnline:ENSMUSG00000021010 Uniprot:Q9QZQ0
Length = 925
Score = 131 (51.2 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 49/203 (24%), Positives = 89/203 (43%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIR------------ 104
+ RR +EN ELA+L+ A S L DK +I++ T++ ++
Sbjct: 68 RSRRGKENFEFYELAKLLPLP--AAITSQL----DKASIIRLTISYLKMRDFANQGDPPW 121
Query: 105 NIKQQETSSDAVQQGEVSSSKPTVITNEV----LGPLLLEALEGFLFVVNPDGYVNFCTE 160
N++ + + +G P+ + EV LG +L++L+GF+F +N +G + +E
Sbjct: 122 NLRMEGPPPNTSVKGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYISE 181
Query: 161 NIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCL---VPSSHQV--NAWTSDSGGQAGKR 215
+ ++ S+ E+ G SV++ +H GDH L +P + T D+ A
Sbjct: 182 TVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTTEDAASSASSS 241
Query: 216 PSLTASTPNRTFNIRLLISSTHL 238
P T + LL + L
Sbjct: 242 SQSETPEPVETTSPSLLTTDNTL 264
Score = 43 (20.2 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 300 DTSGVSQTHTQYLNKAVACKTSATVWTCPN 329
D G+ +H LNK C T W N
Sbjct: 379 DVEGIRHSHLDLLNKG-QCVTKYYRWMQKN 407
>UNIPROTKB|I3L5U3 [details] [associations]
symbol:I3L5U3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104038
EMBL:FP312884 Ensembl:ENSSSCT00000027011 OMA:SEGLIFY Uniprot:I3L5U3
Length = 394
Score = 124 (48.7 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNI-------KQQ 109
KR R++ N ++ LA L+ F + + + K DK ++L+ +V+ +R K
Sbjct: 37 KRHRDRLNTELDRLASLLP---FPQDVIN---KLDKLSVLRLSVSYLRAKSFFDAFRKTY 90
Query: 110 ETSSDAVQQGEV-----SSSKPTVITNEVLGP--LLLEALEGFLFVVNPDGYVNFCTENI 162
+ +G + + + VI E G LL+AL GF+ VV D V + + I
Sbjct: 91 PNHLGGIFKGNMWLVGENGNMSLVIMGETSGEGEFLLQALNGFVLVVTTDALVFYASSTI 150
Query: 163 KSFIRYSRQEVLGKSVYNLIHHGDHARFHNCL 194
+ ++ + + +V+ +SVY LIH D A F L
Sbjct: 151 QDYLGFQQSDVIHQSVYELIHTEDRAEFQRQL 182
>UNIPROTKB|A9YTQ3 [details] [associations]
symbol:AHRR "Aryl hydrocarbon receptor repressor"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 Gene3D:4.10.280.10 EMBL:AF293639
EMBL:AF293629 EMBL:AF293630 EMBL:AF293631 EMBL:AF293632
EMBL:AF293633 EMBL:AF293634 EMBL:AF293635 EMBL:AF293636
EMBL:AF293637 EMBL:AF293638 EMBL:EU293605 EMBL:AB033060
EMBL:AC010442 EMBL:AC118458 EMBL:CH471235 EMBL:BC151852
EMBL:BC152406 IPI:IPI00718806 IPI:IPI00893051 IPI:IPI00893349
RefSeq:NP_001229341.1 RefSeq:NP_065782.2 UniGene:Hs.50823
ProteinModelPortal:A9YTQ3 SMR:A9YTQ3 STRING:A9YTQ3
PhosphoSite:A9YTQ3 PaxDb:A9YTQ3 PRIDE:A9YTQ3 DNASU:57491
Ensembl:ENST00000316418 Ensembl:ENST00000505113 GeneID:57491
KEGG:hsa:57491 UCSC:uc003jav.3 UCSC:uc003jaw.3 CTD:57491
GeneCards:GC05P000291 HGNC:HGNC:346 HPA:HPA019614 HPA:HPA021483
MIM:606517 neXtProt:NX_A9YTQ3 PharmGKB:PA24639 eggNOG:NOG314160
HOGENOM:HOG000033866 HOVERGEN:HBG073122 InParanoid:A9YTQ3 KO:K09094
OMA:AEGMIFY GenomeRNAi:57491 NextBio:63778 ArrayExpress:A9YTQ3
Bgee:A9YTQ3 Genevestigator:A9YTQ3 GO:GO:0033235 Uniprot:A9YTQ3
Length = 701
Score = 127 (49.8 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 42/141 (29%), Positives = 73/141 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ-----QET 111
KR R++ N ++ LA L+ F + S K DK ++L+ +V+ +R +K QE
Sbjct: 38 KRHRDRLNAELDHLASLLP---FPPDIIS---KLDKLSVLRLSVSYLR-VKSFFQVVQEQ 90
Query: 112 SSDAVQQGEVS--SSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
SS G S S P + + G LLLE+L GF VV+ +G + + + I ++ +
Sbjct: 91 SSRQPAAGAPSPGDSCPLAGSAVLEGRLLLESLNGFALVVSAEGTIFYASATIVDYLGFH 150
Query: 170 RQEVLGKSVYNLIHHGDHARF 190
+ +V+ +++Y+ IH D F
Sbjct: 151 QTDVMHQNIYDYIHVDDRQDF 171
>ZFIN|ZDB-GENE-040426-706 [details] [associations]
symbol:hif1ab "hypoxia-inducible factor 1, alpha
subunit (basic helix-loop-helix transcription factor) b"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-040426-706 GO:GO:0005634 GO:GO:0003677 GO:GO:0051402
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 OrthoDB:EOG40CHGP OMA:QNAQRKR
EMBL:BX255914 EMBL:AY326951 IPI:IPI00491851 UniGene:Dr.75612
SMR:Q6EHI4 STRING:Q6EHI4 Ensembl:ENSDART00000018500
InParanoid:Q6EHI4 Uniprot:Q6EHI4
Length = 777
Score = 127 (49.8 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 55/233 (23%), Positives = 104/233 (44%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RR +E+ ELA + +++S DK +I++ T++ +R K +SD
Sbjct: 26 RSRRGKESEVFYELAHQLP---LPHNVTSHL---DKASIMRLTISYLRMRKL--LNSDEK 77
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
++ E + + +++ G L+ALEGFL V++ DG + + +EN+ + ++ ++ G
Sbjct: 78 EEKEENE-----LESQLNG-FYLKALEGFLMVLSEDGDMVYLSENVSKSMGLTQFDLTGH 131
Query: 177 SVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISST 236
S++ H DH LV + ++ R T ++ RT NI+
Sbjct: 132 SIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTVNIKSATWKV 191
Query: 237 HLTAGLSRAG-GENGQDDSGDVSSEGGPCLMCVARRIP-PTDKQLSAPIEQFT 287
AG R G +DSG L+ + IP P++ + P++ T
Sbjct: 192 LHCAGHVRVHEGSEASEDSG-FKEPPVTYLVLICEPIPHPSN--IEVPLDSKT 241
>UNIPROTKB|F1RM06 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007610 "behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0007610 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 OMA:VYPHLQR EMBL:FP103026
Ensembl:ENSSSCT00000003447 Uniprot:F1RM06
Length = 598
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 52/208 (25%), Positives = 93/208 (44%)
Query: 33 MSSLAVK--PDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKP 90
+ L VK P C Q + RR +EN ELA+L+ ++SS +
Sbjct: 29 LPGLVVKAPPGPCLQAQRKEKSRNAARSRRGKENLEFFELAKLLPLPG---AISS---QL 82
Query: 91 DKCAILQETVNQIRNIKQQETSSD------AVQQGEVSSSK--PTVITNEV----LGPLL 138
DK +I++ +V +R + + A ++ + P + +E+ LG +
Sbjct: 83 DKASIVRLSVTYLRLRRFAALGAPPWGLRTAGPPASLAPGRRGPVALVSEIFEQHLGGHI 142
Query: 139 LEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFHNCL---V 195
L++L+GF+F +N +G + +E + ++ S+ E+ G SV++ IH GDH+ L
Sbjct: 143 LQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHSEVLEQLGLRA 202
Query: 196 PSSHQVNAWTSDSGGQAGKRPSLTASTP 223
P+S + S + S A TP
Sbjct: 203 PTSGPPTPPSVPSSSSSSSSSSSFADTP 230
>UNIPROTKB|E2QUK0 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048625 "myoblast cell fate commitment"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043129
"surfactant homeostasis" evidence=IEA] [GO:0042415 "norepinephrine
metabolic process" evidence=IEA] [GO:0035035 "histone
acetyltransferase binding" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0030218 "erythrocyte
differentiation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0030324 GO:GO:0007601 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0004871 GO:GO:0001974 GO:GO:0030218
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005
GO:GO:0002027 GO:GO:0001892 GO:GO:0043619 GO:GO:0042415
GO:GO:0048469 GO:GO:0043129 OMA:QYQDYSL GO:GO:0048625
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:AAEX03007490
Ensembl:ENSCAFT00000004132 Uniprot:E2QUK0
Length = 869
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 47/175 (26%), Positives = 76/175 (43%)
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQ 118
RR +E ELA + S+SS DK I++ ++ +R K S +
Sbjct: 26 RRSRETEVFYELAHELP---LPHSVSS---HWDKAGIMRLAISFLRTHK---LLSQVCSE 76
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
E + N+ + L L+ALEGF+ VV DG + F +ENI F+ ++ E+ G S+
Sbjct: 77 NESEAE-----ANQQMDNLYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSI 131
Query: 179 YNLIHHGDHARFH-NCLVPSSHQVNAWTSDSGGQAG--KRPSLTASTPNRTFNIR 230
++ H DH N + S + D + R T + RT N++
Sbjct: 132 FDFTHPCDHEEIRENLSLKSGPGFGKKSKDMSTERDFFMRMKCTVTNRGRTVNLK 186
>UNIPROTKB|E9PB04 [details] [associations]
symbol:HIF3A "Hypoxia-inducible factor 3-alpha"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000014 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
SMART:SM00091 InterPro:IPR001610 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0001666 GO:GO:0045944
GO:GO:0003700 GO:GO:0006366 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 InterPro:IPR021537 Pfam:PF11413 EMBL:AC007193
HGNC:HGNC:15825 IPI:IPI01008729 ProteinModelPortal:E9PB04
SMR:E9PB04 Ensembl:ENST00000339613 ArrayExpress:E9PB04 Bgee:E9PB04
Uniprot:E9PB04
Length = 613
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 41/148 (27%), Positives = 66/148 (44%)
Query: 132 EVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHARFH 191
E L L+ALEGF+ V+ +G + + +EN+ + S+ E++G S+++ IH D
Sbjct: 27 EPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLSQLELIGHSIFDFIHPCDQEELQ 86
Query: 192 NCLVP----SSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISSTHLTAGLSRAGG 247
+ L P S +V A T R T ++ RT N++ +G RA
Sbjct: 87 DALTPQQTLSRRKVEAPTERC---FSLRMKSTLTSRGRTLNLKAATWKVLNCSGHMRAYK 143
Query: 248 ENGQDD-SGDVSSEGG-PCLMCVARRIP 273
Q +G SE CL+ + IP
Sbjct: 144 PPAQTSPAGSPDSEPPLQCLVLICEAIP 171
>RGD|1559857 [details] [associations]
symbol:Ahrr "aryl-hydrocarbon receptor repressor" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA;ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 RGD:1559857 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:57491 eggNOG:NOG314160
HOGENOM:HOG000033866 HOVERGEN:HBG073122 KO:K09094 OMA:AEGMIFY
GO:GO:0033235 GeneTree:ENSGT00700000104038 OrthoDB:EOG4TF0JW
EMBL:AY367561 EMBL:AB174900 IPI:IPI00204172 RefSeq:NP_001019456.1
UniGene:Rn.145524 ProteinModelPortal:Q75NT5 STRING:Q75NT5
PhosphoSite:Q75NT5 PRIDE:Q75NT5 Ensembl:ENSRNOT00000019806
GeneID:498999 KEGG:rno:498999 UCSC:RGD:1559857 InParanoid:Q75NT5
NextBio:701519 Genevestigator:Q75NT5 Uniprot:Q75NT5
Length = 701
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 42/142 (29%), Positives = 76/142 (53%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ-----QET 111
KR R++ N ++ LA L+ F+ + S K DK ++L+ +V+ +R +K QET
Sbjct: 35 KRHRDRLNTELDHLASLLP---FSPDIIS---KLDKLSVLRLSVSYLR-VKSFFQALQET 87
Query: 112 ---SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
S+ A+ E SS+ + G LLLE+L GF VV+ +G + + + I ++ +
Sbjct: 88 CVWSAPALSP-EDHSSRGFPVQE---GRLLLESLNGFALVVSAEGMIFYASATIVDYLGF 143
Query: 169 SRQEVLGKSVYNLIHHGDHARF 190
+ +V+ +++Y+ IH D F
Sbjct: 144 HQTDVMHQNIYDYIHVDDRQDF 165
>UNIPROTKB|E1B815 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007610 "behavior" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677
GO:GO:0007610 GO:GO:0006351 GO:GO:0000122 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 CTD:4861 KO:K09098 OMA:VYPHLQR
EMBL:DAAA02047406 IPI:IPI00717601 RefSeq:NP_001179586.1
UniGene:Bt.109442 Ensembl:ENSBTAT00000020691 GeneID:528272
KEGG:bta:528272 NextBio:20874783 Uniprot:E1B815
Length = 587
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 43/161 (26%), Positives = 75/161 (46%)
Query: 40 PDKCAILQETVNQCLNEKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQET 99
P C Q + RR +EN ELA+L+ ++SS + DK +I++ +
Sbjct: 31 PGPCLQAQRKEKSRNAARSRRGKENLEFFELAKLLPLPG---AISS---QLDKASIVRLS 84
Query: 100 VNQIR-------NIKQQETSSDAVQQGEVSSSK-PTVITNEV----LGPLLLEALEGFLF 147
V +R S G + P + +EV LG +L++L+GF+F
Sbjct: 85 VTYLRLRRFAALGAPPWGLRSSGPPAGLAPGRRGPVALVSEVFEQHLGGHILQSLDGFVF 144
Query: 148 VVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHA 188
+N +G + +E + ++ S+ E+ G SV++ IH GDH+
Sbjct: 145 ALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHS 185
>UNIPROTKB|F1NHD6 [details] [associations]
symbol:AHRR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0033235 "positive
regulation of protein sumoylation" evidence=IEA] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 GO:GO:0000122
GO:GO:0004871 Gene3D:4.10.280.10 GO:GO:0033235
GeneTree:ENSGT00700000104038 EMBL:AADN02008286 EMBL:AADN02008287
IPI:IPI00573589 Ensembl:ENSGALT00000021857 OMA:LNRCFIC
Uniprot:F1NHD6
Length = 749
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 41/141 (29%), Positives = 72/141 (51%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ-----QET 111
KR R++ N ++ LA L+ F + S K DK ++L+ +V+ +R +K QET
Sbjct: 36 KRHRDRLNAELDHLASLLP---FPPDIIS---KLDKLSVLRLSVSYLR-VKSFFQVLQET 88
Query: 112 SSDAVQ--QGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYS 169
V + S + T + G LLLE+L GF VV+ DG + + + I ++ +
Sbjct: 89 CFFTVNLISLQEQSYRRTAVQE---GGLLLESLNGFALVVSADGMIFYASSTIVDYLGFH 145
Query: 170 RQEVLGKSVYNLIHHGDHARF 190
+ +V+ +++Y+ IH D F
Sbjct: 146 QTDVMHQNIYDYIHVDDRQDF 166
>FB|FBgn0262139 [details] [associations]
symbol:trh "trachealess" species:7227 "Drosophila
melanogaster" [GO:0072175 "epithelial tube formation" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA;TAS] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0007424 "open tracheal system
development" evidence=NAS;IMP;TAS] [GO:0007431 "salivary gland
development" evidence=NAS;IMP] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=TAS;IPI] [GO:0035277
"spiracle morphogenesis, open tracheal system" evidence=IMP]
[GO:0007443 "Malpighian tubule morphogenesis" evidence=IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS;TAS;IPI] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0007425 "epithelial cell fate determination, open tracheal
system" evidence=IMP;TAS] [GO:0007435 "salivary gland
morphogenesis" evidence=IMP;TAS] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 EMBL:AE014296 GO:GO:0007435 GO:GO:0043565
GO:GO:0035277 GO:GO:0048813 GO:GO:0004871 GO:GO:0000981
GO:GO:0046982 SMART:SM00086 GO:GO:0046331 SUPFAM:SSF47459
GO:GO:0007425 GO:GO:0007443 eggNOG:NOG287666 KO:K09098
GO:GO:0072175 CTD:7200 EMBL:U33427 EMBL:U42699 EMBL:BT031114
EMBL:AY094911 RefSeq:NP_001036575.1 RefSeq:NP_001097461.2
RefSeq:NP_523872.2 UniGene:Dm.7330 ProteinModelPortal:Q24119
SMR:Q24119 STRING:Q24119 GeneID:38065 KEGG:dme:Dmel_CG42865
FlyBase:FBgn0262139 InParanoid:Q24119 OMA:PNASESH OrthoDB:EOG4JWSVB
GenomeRNAi:38065 NextBio:806807 Bgee:Q24119 GermOnline:CG6883
Uniprot:Q24119
Length = 1022
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 42/170 (24%), Positives = 81/170 (47%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVN--QIRNIK------- 107
+ RR +EN ELA+++ A S L DK +I++ T++ ++R+
Sbjct: 96 RSRRGKENYEFYELAKMLPLP--AAITSQL----DKASIIRLTISYLKLRDFSGHGDPPW 149
Query: 108 -QQETSSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFI 166
++ +SS ++ + S + + G +L++L+GF V DG + +E + ++
Sbjct: 150 TREASSSSKLKSAAIRRSPAVDLFEQHQGTHILQSLDGFALAVAADGRFLYISETVSIYL 209
Query: 167 RYSRQEVLGKSVYNLIHHGDHARFHNCL---VPSSHQVNAWTSDSGGQAG 213
S+ E+ G S+++ IH DH+ + L + S +S SGG G
Sbjct: 210 GLSQVEMTGSSIFDYIHQADHSEIADQLGLSLTSGGGGGGGSSSSGGGGG 259
>MGI|MGI:109205 [details] [associations]
symbol:Npas1 "neuronal PAS domain protein 1" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007610
"behavior" evidence=IMP] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 MGI:MGI:109205
GO:GO:0005634 GO:GO:0003677 GO:GO:0007610 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GeneTree:ENSGT00700000104038 CTD:4861
eggNOG:NOG287666 HOGENOM:HOG000236298 HOVERGEN:HBG052655 KO:K09098
OMA:VYPHLQR OrthoDB:EOG4M0F1J EMBL:U77967 IPI:IPI00125487
RefSeq:NP_032744.1 UniGene:Mm.145821 ProteinModelPortal:P97459
SMR:P97459 STRING:P97459 PRIDE:P97459 Ensembl:ENSMUST00000002053
GeneID:18142 KEGG:mmu:18142 InParanoid:P97459 NextBio:293392
Bgee:P97459 CleanEx:MM_NPAS1 Genevestigator:P97459
GermOnline:ENSMUSG00000001988 Uniprot:P97459
Length = 594
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 49/171 (28%), Positives = 84/171 (49%)
Query: 33 MSSLAVK--PDKCAILQETVNQCLNEKR-RREQENNYIEELAELISAASFAESMSSLAVK 89
+ L VK P C Q + N R RR +EN ELA+L+ ++SS +
Sbjct: 29 LPGLMVKAPPGPCLQAQRK-EKSRNAARWRRGKENLEFFELAKLLPLPG---AISS---Q 81
Query: 90 PDKCAILQETVNQIRNIKQQETSSD-----AV--QQGEVSSSK-PTVITNEV----LGPL 137
DK +I++ +V +R + + AV G + P + +EV LG
Sbjct: 82 LDKASIVRLSVTYLRLRRFAALGAPPWGLRAVGPPAGLAPGRRGPVALVSEVFEQHLGGH 141
Query: 138 LLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNLIHHGDHA 188
+L++L+GF+F +N +G + +E + ++ S+ E+ G SV++ IH GDH+
Sbjct: 142 ILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHS 192
>UNIPROTKB|F1SRU5 [details] [associations]
symbol:HIF1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001054 "negative regulation of mesenchymal cell
apoptotic process" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0061419 "positive regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:0061298 "retina vasculature development
in camera-type eye" evidence=IEA] [GO:0061030 "epithelial cell
differentiation involved in mammary gland alveolus development"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0051541 "elastin metabolic process" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0048546 "digestive tract
morphogenesis" evidence=IEA] [GO:0046886 "positive regulation of
hormone biosynthetic process" evidence=IEA] [GO:0046716 "muscle
cell homeostasis" evidence=IEA] [GO:0045926 "negative regulation of
growth" evidence=IEA] [GO:0045648 "positive regulation of
erythrocyte differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042541 "hemoglobin biosynthetic
process" evidence=IEA] [GO:0035774 "positive regulation of insulin
secretion involved in cellular response to glucose stimulus"
evidence=IEA] [GO:0035162 "embryonic hemopoiesis" evidence=IEA]
[GO:0035035 "histone acetyltransferase binding" evidence=IEA]
[GO:0032963 "collagen metabolic process" evidence=IEA] [GO:0032909
"regulation of transforming growth factor beta2 production"
evidence=IEA] [GO:0032364 "oxygen homeostasis" evidence=IEA]
[GO:0032007 "negative regulation of TOR signaling cascade"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IEA]
[GO:0030502 "negative regulation of bone mineralization"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021502 "neural fold elevation formation"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0019896 "axon transport of mitochondrion" evidence=IEA]
[GO:0014850 "response to muscle activity" evidence=IEA] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0010573
"vascular endothelial growth factor production" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007595
"lactation" evidence=IEA] [GO:0006879 "cellular iron ion
homeostasis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0006089 "lactate metabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003208 "cardiac ventricle morphogenesis"
evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
evidence=IEA] [GO:0002248 "connective tissue replacement involved
in inflammatory response wound healing" evidence=IEA] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA]
[GO:0001947 "heart looping" evidence=IEA] [GO:0001922 "B-1 B cell
homeostasis" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000988 "protein
binding transcription factor activity" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001321 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0021987 GO:GO:0005730
GO:GO:0035774 GO:GO:0001755 GO:GO:0071542 GO:GO:0006110
GO:GO:0043565 GO:GO:0008542 GO:GO:0071456 GO:GO:0043524
GO:GO:0010575 GO:GO:0050790 GO:GO:0001525 GO:GO:0042593
GO:GO:0032007 GO:GO:0006879 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0004871 GO:GO:0046716
GO:GO:0009434 GO:GO:0045926 GO:GO:0019896 GO:GO:0045648
GO:GO:0061298 GO:GO:0051216 SMART:SM00086 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0001947 GO:GO:0014850 GO:GO:0001837
GO:GO:0030949 GO:GO:0071347 GO:GO:0003151 GO:GO:0007595
GO:GO:0010634 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
GO:GO:0002052 GO:GO:0035162 GO:GO:0048546 GO:GO:0030502
GO:GO:0042541 GO:GO:0000988 GO:GO:0006089 GO:GO:0010870
GO:GO:0032364 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 GO:GO:0061030
GO:GO:0003208 OMA:QNAQRKR GO:GO:0001922 GO:GO:0032963 GO:GO:0002248
GO:GO:0051541 GO:GO:0060574 GO:GO:2001054 GO:GO:0021502
GO:GO:0032909 GO:GO:0010573 EMBL:FP236550
Ensembl:ENSSSCT00000005618 ArrayExpress:F1SRU5 Uniprot:F1SRU5
Length = 824
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 50/234 (21%), Positives = 103/234 (44%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RR +E+ ELA + ++SS DK ++++ T++ +R +++ + D
Sbjct: 27 RSRRSKESEVFYELAHQLP---LPHNVSSHL---DKASVMRLTISYLR-VRKLLDAGDLD 79
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
+ E+ + + L+AL+GF+ V+ DG + + ++N+ ++ ++ E+ G
Sbjct: 80 IEDEMKAQ---------MNCFYLKALDGFVMVLTDDGDMIYISDNVNKYMGLTQFELTGH 130
Query: 177 SVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAG-KRPSLTASTPNRTFNIRLLISS 235
SV++ H DH L + V + ++ R T ++ RT NI+
Sbjct: 131 SVFDFTHPCDHEEMREMLTHRNGLVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIKSATWK 190
Query: 236 T-HLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIP-PTDKQLSAPIEQFT 287
H T + N Q G CL+ + IP P++ ++ P++ T
Sbjct: 191 VLHCTGHIHVYDTNNNQSQCG-YKKPPMTCLVLICEPIPHPSNIEI--PLDSKT 241
>ZFIN|ZDB-GENE-051018-2 [details] [associations]
symbol:ahrrb "aryl-hydrocarbon receptor repressor b"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0042221
"response to chemical stimulus" evidence=IDA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 ZFIN:ZDB-GENE-051018-2 GO:GO:0005737
GO:GO:0003677 GO:GO:0042221 GO:GO:0003700 GO:GO:0006357
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 Gene3D:4.10.280.10
HOVERGEN:HBG073122 KO:K09094 EMBL:AY928204 IPI:IPI00483748
RefSeq:NP_001029092.1 UniGene:Dr.48245 ProteinModelPortal:Q3T2L2
STRING:Q3T2L2 GeneID:565319 KEGG:dre:565319 CTD:565319
InParanoid:Q3T2L2 NextBio:20885825 Uniprot:Q3T2L2
Length = 573
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 43/151 (28%), Positives = 78/151 (51%)
Query: 48 ETVNQCLN-EKRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNI 106
E +Q N KR R++ N ++ L L+ + AE ++ L DK ++L+ +V+ +R +
Sbjct: 24 EKADQKSNPSKRHRDRLNAELDRLGSLLPFS--AEVITKL----DKLSVLRLSVSFLR-V 76
Query: 107 KQQETSSDAVQQGEVSSS--KPTVITNEVL-----GPLLLEALEGFLFVVNPDGYVNFCT 159
K + AVQ+ E S+ PT EV LLL++L GF VV+ DG + + +
Sbjct: 77 K---SFFQAVQEKENHSADVSPTETRKEVQPCVVESDLLLQSLSGFALVVSSDGIIFYAS 133
Query: 160 ENIKSFIRYSRQEVLGKSVYNLIHHGDHARF 190
I ++ + + +V+ + V++ IH + F
Sbjct: 134 STIIDYLGFHQTDVMHQKVFDYIHVDERQEF 164
>UNIPROTKB|F1S5K9 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043619 "regulation
of transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0043129 "surfactant
homeostasis" evidence=IEA] [GO:0042415 "norepinephrine metabolic
process" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0030324
GO:GO:0007601 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0004871 GO:GO:0001974 GO:GO:0030218 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027
GO:GO:0001892 GO:GO:0043619 GO:GO:0042415 GO:GO:0048469
GO:GO:0043129 OMA:QYQDYSL GO:GO:0048625 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:CU570958
Ensembl:ENSSSCT00000009245 Uniprot:F1S5K9
Length = 863
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQ 118
RR +E ELA + S+SS DK +I++ ++ +R K S +
Sbjct: 18 RRSKETEVFYELAHELP---LPHSVSSHL---DKASIMRLAISFLRTHK---LLSSVCSE 68
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
E + + N L L+ALEGF+ VV DG + F +ENI F+ ++ E+ G S+
Sbjct: 69 NESEAEADQQMDN-----LYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSI 123
Query: 179 YNLIHHGDHARFH-NCLVPSSHQVNAWTSDSGGQAG--KRPSLTASTPNRTFNIR 230
++ H DH N + + + D + R T + RT N++
Sbjct: 124 FDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRTVNLK 178
>UNIPROTKB|A5PJT1 [details] [associations]
symbol:EPAS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048625 "myoblast cell fate commitment" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0043619 "regulation
of transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0043129 "surfactant
homeostasis" evidence=IEA] [GO:0042415 "norepinephrine metabolic
process" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0030218 "erythrocyte differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0002027 "regulation of heart rate"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0001892 "embryonic placenta development" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0030324
GO:GO:0007601 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0004871 GO:GO:0001974 GO:GO:0030218 SMART:SM00086
TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027
GO:GO:0001892 GO:GO:0043619 GO:GO:0042415 GO:GO:0048469
GO:GO:0043129 HOGENOM:HOG000234306 HOVERGEN:HBG060456 OMA:QYQDYSL
GO:GO:0048625 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 GeneTree:ENSGT00650000093281 EMBL:DAAA02030718
EMBL:DAAA02030719 EMBL:BC142229 IPI:IPI00718553 UniGene:Bt.45570
SMR:A5PJT1 STRING:A5PJT1 Ensembl:ENSBTAT00000004836
InParanoid:A5PJT1 Uniprot:A5PJT1
Length = 870
Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQ 118
RR +E ELA + S+SS DK +I++ ++ +R K S +
Sbjct: 26 RRSKETEVFYELAHELP---LPHSVSSHL---DKASIMRLAISFLRTHK---LLSSVCSE 76
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
E + + N L L+ALEGF+ VV DG + F +ENI F+ ++ E+ G S+
Sbjct: 77 NESEADADQQMDN-----LYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSI 131
Query: 179 YNLIHHGDHARFH-NCLVPSSHQVNAWTSDSGGQAG--KRPSLTASTPNRTFNIR 230
++ H DH N + + + D + R T + RT N++
Sbjct: 132 FDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRTVNLK 186
>UNIPROTKB|Q99814 [details] [associations]
symbol:EPAS1 "Endothelial PAS domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0002027 "regulation of heart rate" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0042415 "norepinephrine metabolic process" evidence=IEA]
[GO:0043129 "surfactant homeostasis" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0035035 "histone acetyltransferase
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IGI] [GO:0005667 "transcription factor complex"
evidence=IDA;IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0033554 "cellular response to stress" evidence=TAS] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=TAS] [GO:0071456 "cellular response
to hypoxia" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0048625 "myoblast cell fate commitment"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 Reactome:REACT_120956 GO:GO:0005829
GO:GO:0007165 GO:GO:0003677 GO:GO:0030324 GO:GO:0007601
GO:GO:0043565 GO:GO:0045944 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0006366 GO:GO:0004871 GO:GO:0001974
GO:GO:0030218 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007005 Pathway_Interaction_DB:vegfr1_2_pathway GO:GO:0002027
PDB:2A24 PDB:3F1N PDB:3F1O PDB:3F1P PDB:3H7W PDB:3H82 PDBsum:2A24
PDBsum:3F1N PDBsum:3F1O PDBsum:3F1P PDBsum:3H7W PDBsum:3H82
GO:GO:0001892 GO:GO:0061418 GO:GO:0043619 GO:GO:0042415
GO:GO:0048469 GO:GO:0043129 Orphanet:247511 EMBL:U81984 EMBL:U51626
EMBL:BC051338 IPI:IPI00294084 RefSeq:NP_001421.2 UniGene:Hs.468410
PDB:1P97 PDBsum:1P97 ProteinModelPortal:Q99814 SMR:Q99814
DIP:DIP-32857N IntAct:Q99814 MINT:MINT-1199606 STRING:Q99814
PhosphoSite:Q99814 DMDM:32470617 PRIDE:Q99814
Ensembl:ENST00000263734 GeneID:2034 KEGG:hsa:2034 UCSC:uc002ruv.3
CTD:2034 GeneCards:GC02P046436 HGNC:HGNC:3374 HPA:CAB012248
MIM:603349 MIM:611783 neXtProt:NX_Q99814 PharmGKB:PA27809
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InParanoid:Q99814 KO:K09095 OMA:QYQDYSL OrthoDB:EOG4XPQF6
PhylomeDB:Q99814 BindingDB:Q99814 ChEMBL:CHEMBL1744522
ChiTaRS:EPAS1 EvolutionaryTrace:Q99814 GenomeRNAi:2034 NextBio:8255
ArrayExpress:Q99814 Bgee:Q99814 CleanEx:HS_EPAS1
Genevestigator:Q99814 GermOnline:ENSG00000116016 GO:GO:0048625
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
Uniprot:Q99814
Length = 870
Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQ 118
RR +E ELA + S+SS DK +I++ ++ +R K S +
Sbjct: 26 RRSKETEVFYELAHELP---LPHSVSSHL---DKASIMRLAISFLRTHK---LLSSVCSE 76
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
E + + N L L+ALEGF+ VV DG + F +ENI F+ ++ E+ G S+
Sbjct: 77 NESEAEADQQMDN-----LYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSI 131
Query: 179 YNLIHHGDHARFH-NCLVPSSHQVNAWTSDSGGQAG--KRPSLTASTPNRTFNIR 230
++ H DH N + + + D + R T + RT N++
Sbjct: 132 FDFTHPCDHEEIRENLSLKNGSGFGKKSKDMSTERDFFMRMKCTVTNRGRTVNLK 186
>UNIPROTKB|Q99742 [details] [associations]
symbol:NPAS1 "Neuronal PAS domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0007417 "central
nervous system development" evidence=TAS] InterPro:IPR000014
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0003677 GO:GO:0007610
GO:GO:0007417 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:U77968 EMBL:AB054002 EMBL:BC039016 EMBL:U51628 IPI:IPI00293815
RefSeq:NP_002508.2 UniGene:Hs.79564 ProteinModelPortal:Q99742
SMR:Q99742 STRING:Q99742 DMDM:59803108 PRIDE:Q99742
Ensembl:ENST00000449844 GeneID:4861 KEGG:hsa:4861 UCSC:uc002pfw.3
CTD:4861 GeneCards:GC19P047523 HGNC:HGNC:7894 MIM:603346
neXtProt:NX_Q99742 PharmGKB:PA31695 eggNOG:NOG287666
HOGENOM:HOG000236298 HOVERGEN:HBG052655 InParanoid:Q99742 KO:K09098
OMA:VYPHLQR OrthoDB:EOG4M0F1J PhylomeDB:Q99742 GenomeRNAi:4861
NextBio:18726 ArrayExpress:Q99742 Bgee:Q99742 CleanEx:HS_NPAS1
Genevestigator:Q99742 GermOnline:ENSG00000130751 Uniprot:Q99742
Length = 590
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 30/102 (29%), Positives = 51/102 (50%)
Query: 126 PTVITNEV----LGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNL 181
P + +EV LG +L++L+GF+F +N +G + +E + ++ S+ E+ G SV++
Sbjct: 126 PAALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVEMTGSSVFDY 185
Query: 182 IHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTP 223
IH GDH+ L + T S + S A TP
Sbjct: 186 IHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSLADTP 227
>MGI|MGI:109169 [details] [associations]
symbol:Epas1 "endothelial PAS domain protein 1" species:10090
"Mus musculus" [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001666
"response to hypoxia" evidence=ISO;IMP] [GO:0001892 "embryonic
placenta development" evidence=IGI] [GO:0001974 "blood vessel
remodeling" evidence=IMP] [GO:0002027 "regulation of heart rate"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IGI;ISO;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IGI;IMP]
[GO:0007005 "mitochondrion organization" evidence=IMP] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007601 "visual
perception" evidence=IMP] [GO:0008134 "transcription factor
binding" evidence=ISO;IPI] [GO:0030097 "hemopoiesis" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IGI] [GO:0030218
"erythrocyte differentiation" evidence=IMP] [GO:0030324 "lung
development" evidence=IMP] [GO:0035035 "histone acetyltransferase
binding" evidence=ISO] [GO:0042415 "norepinephrine metabolic
process" evidence=IMP] [GO:0043129 "surfactant homeostasis"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IGI;IMP;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IGI;ISO;IMP;IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO;IPI] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0048469 "cell maturation" evidence=IMP]
[GO:0048625 "myoblast cell fate commitment" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 MGI:MGI:109169
GO:GO:0005737 GO:GO:0003677 GO:GO:0030324 GO:GO:0007601
GO:GO:0043565 GO:GO:0001666 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0004871 GO:GO:0001974 GO:GO:0030218
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005
GO:GO:0002027 GO:GO:0035035 GO:GO:0001892 GO:GO:0043619
GO:GO:0042415 GO:GO:0048469 GO:GO:0043129 CTD:2034 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 KO:K09095 OMA:QYQDYSL
OrthoDB:EOG4XPQF6 ChiTaRS:EPAS1 GO:GO:0048625 InterPro:IPR014887
InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778 EMBL:U81983
EMBL:D89787 EMBL:AF045160 IPI:IPI00312615 RefSeq:NP_034267.3
UniGene:Mm.1415 ProteinModelPortal:P97481 SMR:P97481 DIP:DIP-46109N
STRING:P97481 PhosphoSite:P97481 PRIDE:P97481
Ensembl:ENSMUST00000024954 GeneID:13819 KEGG:mmu:13819
UCSC:uc008duj.2 GeneTree:ENSGT00650000093281 InParanoid:P97481
NextBio:284608 Bgee:P97481 CleanEx:MM_EPAS1 Genevestigator:P97481
GermOnline:ENSMUSG00000024140 Uniprot:P97481
Length = 874
Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQ 118
RR +E ELA + S+SS DK +I++ ++ +R K S +
Sbjct: 26 RRSKETEVFYELAHELP---LPHSVSSHL---DKASIMRLAISFLRTHK---LLSSVCSE 76
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
E + + N L L+ALEGF+ VV DG + F +ENI F+ ++ E+ G S+
Sbjct: 77 NESEAEADQQMDN-----LYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSI 131
Query: 179 YNLIHHGDHARFH-NCLVPSSHQVNAWTSDSGGQAG--KRPSLTASTPNRTFNIR 230
++ H DH N + + + D + R T + RT N++
Sbjct: 132 FDFTHPCDHEEIRENLTLKNGSGFGKKSKDVSTERDFFMRMKCTVTNRGRTVNLK 186
>RGD|68404 [details] [associations]
symbol:Epas1 "endothelial PAS domain protein 1" species:10116
"Rattus norvegicus" [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
[GO:0001666 "response to hypoxia" evidence=ISO;IDA;TAS] [GO:0001892
"embryonic placenta development" evidence=ISO] [GO:0001974 "blood
vessel remodeling" evidence=ISO] [GO:0002027 "regulation of heart
rate" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO;IDA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006979 "response
to oxidative stress" evidence=ISO] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0007601 "visual perception"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0030097 "hemopoiesis" evidence=ISO] [GO:0030154
"cell differentiation" evidence=IEA;ISO] [GO:0030218 "erythrocyte
differentiation" evidence=ISO] [GO:0030324 "lung development"
evidence=ISO] [GO:0035035 "histone acetyltransferase binding"
evidence=ISO] [GO:0042415 "norepinephrine metabolic process"
evidence=ISO] [GO:0043129 "surfactant homeostasis" evidence=ISO]
[GO:0043619 "regulation of transcription from RNA polymerase II
promoter in response to oxidative stress" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0048469 "cell maturation" evidence=ISO]
[GO:0048625 "myoblast cell fate commitment" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:68404 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0030324 GO:GO:0007601 GO:GO:0001666
GO:GO:0045944 GO:GO:0003700 GO:GO:0001525 GO:GO:0005667
GO:GO:0001077 GO:GO:0004871 GO:GO:0001974 GO:GO:0030218
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0007005
GO:GO:0002027 GO:GO:0001892 GO:GO:0043619 GO:GO:0042415
GO:GO:0048469 GO:GO:0043129 CTD:2034 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 KO:K09095 OrthoDB:EOG4XPQF6
GO:GO:0048625 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 EMBL:AJ277828 IPI:IPI00199803 RefSeq:NP_075578.1
UniGene:Rn.55138 ProteinModelPortal:Q9JHS1 SMR:Q9JHS1 STRING:Q9JHS1
PRIDE:Q9JHS1 GeneID:29452 KEGG:rno:29452 UCSC:RGD:68404
InParanoid:Q9JHS1 NextBio:609218 ArrayExpress:Q9JHS1
Genevestigator:Q9JHS1 GermOnline:ENSRNOG00000021318 Uniprot:Q9JHS1
Length = 874
Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
Identities = 46/175 (26%), Positives = 75/175 (42%)
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQ 118
RR +E ELA + S+SS DK +I++ ++ +R K S +
Sbjct: 26 RRSKETEVFYELAHELP---LPHSVSSHL---DKASIMRLAISFLRTHK---LLSSVCSE 76
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
E + + N L L+ALEGF+ VV DG + F +ENI F+ ++ E+ G S+
Sbjct: 77 NESEAEADQQMDN-----LYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSI 131
Query: 179 YNLIHHGDHARFH-NCLVPSSHQVNAWTSDSGGQAG--KRPSLTASTPNRTFNIR 230
++ H DH N + + D + R T + RT N++
Sbjct: 132 FDFTHPCDHEEIRENLTLKTGSGFGKKNKDRSTERDFFMRMKCTVTNRGRTVNLK 186
>UNIPROTKB|Q9JHS1 [details] [associations]
symbol:Epas1 "Endothelial PAS domain-containing protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:68404 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0030324 GO:GO:0007601
GO:GO:0001666 GO:GO:0045944 GO:GO:0003700 GO:GO:0001525
GO:GO:0005667 GO:GO:0001077 GO:GO:0004871 GO:GO:0001974
GO:GO:0030218 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
GO:GO:0007005 GO:GO:0002027 GO:GO:0001892 GO:GO:0043619
GO:GO:0042415 GO:GO:0048469 GO:GO:0043129 CTD:2034 eggNOG:NOG289264
HOGENOM:HOG000234306 HOVERGEN:HBG060456 KO:K09095 OrthoDB:EOG4XPQF6
GO:GO:0048625 InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413
Pfam:PF08778 EMBL:AJ277828 IPI:IPI00199803 RefSeq:NP_075578.1
UniGene:Rn.55138 ProteinModelPortal:Q9JHS1 SMR:Q9JHS1 STRING:Q9JHS1
PRIDE:Q9JHS1 GeneID:29452 KEGG:rno:29452 UCSC:RGD:68404
InParanoid:Q9JHS1 NextBio:609218 ArrayExpress:Q9JHS1
Genevestigator:Q9JHS1 GermOnline:ENSRNOG00000021318 Uniprot:Q9JHS1
Length = 874
Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
Identities = 46/175 (26%), Positives = 75/175 (42%)
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQ 118
RR +E ELA + S+SS DK +I++ ++ +R K S +
Sbjct: 26 RRSKETEVFYELAHELP---LPHSVSSHL---DKASIMRLAISFLRTHK---LLSSVCSE 76
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
E + + N L L+ALEGF+ VV DG + F +ENI F+ ++ E+ G S+
Sbjct: 77 NESEAEADQQMDN-----LYLKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSI 131
Query: 179 YNLIHHGDHARFH-NCLVPSSHQVNAWTSDSGGQAG--KRPSLTASTPNRTFNIR 230
++ H DH N + + D + R T + RT N++
Sbjct: 132 FDFTHPCDHEEIRENLTLKTGSGFGKKNKDRSTERDFFMRMKCTVTNRGRTVNLK 186
>MGI|MGI:1333776 [details] [associations]
symbol:Ahrr "aryl-hydrocarbon receptor repressor"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006805 "xenobiotic metabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0009410
"response to xenobiotic stimulus" evidence=IC] [GO:0033235
"positive regulation of protein sumoylation" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 MGI:MGI:1333776
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006351
GO:GO:0000122 GO:GO:0004871 GO:GO:0006805 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:57491 eggNOG:NOG314160 HOGENOM:HOG000033866
HOVERGEN:HBG073122 KO:K09094 GO:GO:0033235 EMBL:AB015140
EMBL:AK154152 EMBL:AK154761 EMBL:AK155711 EMBL:CT009486
EMBL:AC123833 EMBL:BC118534 EMBL:AK173134 IPI:IPI00131310
IPI:IPI00856961 IPI:IPI00894801 RefSeq:NP_033774.1
UniGene:Mm.290446 ProteinModelPortal:Q3U1U7 SMR:Q3U1U7
STRING:Q3U1U7 PhosphoSite:Q3U1U7 PRIDE:Q3U1U7
Ensembl:ENSMUST00000022059 Ensembl:ENSMUST00000109640 GeneID:11624
KEGG:mmu:11624 UCSC:uc007rev.1 UCSC:uc007rew.1 UCSC:uc007rex.1
GeneTree:ENSGT00700000104038 InParanoid:Q3U1U7 OrthoDB:EOG4TF0JW
NextBio:279175 Bgee:Q3U1U7 Genevestigator:Q3U1U7 Uniprot:Q3U1U7
Length = 701
Score = 119 (46.9 bits), Expect = 0.00061, P = 0.00061
Identities = 43/142 (30%), Positives = 75/142 (52%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQ-----QET 111
KR R++ N ++ LA L+ F+ + S K DK ++L+ +V+ +R +K QET
Sbjct: 35 KRHRDRLNTELDHLASLLP---FSPDIIS---KLDKLSVLRLSVSYLR-VKSFFQALQET 87
Query: 112 ---SSDAVQQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRY 168
S+ A+ E S V E G LLLE+L GF VV+ +G + + + I ++ +
Sbjct: 88 CVWSAPALSPEEHSYRGFPV--QE--GRLLLESLNGFALVVSAEGMIFYASATIVDYLGF 143
Query: 169 SRQEVLGKSVYNLIHHGDHARF 190
+ +V+ +++Y+ IH D F
Sbjct: 144 HQTDVMHQNIYDYIHVDDRQDF 165
>UNIPROTKB|I3LA51 [details] [associations]
symbol:SIM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS51302 SMART:SM00091 InterPro:IPR001610
GO:GO:0005634 GO:GO:0003677 GO:GO:0030324 GO:GO:0003700
GO:GO:0000122 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00700000104038 GO:GO:0009880 OMA:KKPMLPA
EMBL:FP325296 Ensembl:ENSSSCT00000025022 Uniprot:I3LA51
Length = 614
Score = 118 (46.6 bits), Expect = 0.00066, P = 0.00066
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G S+
Sbjct: 7 GQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTGNSI 66
Query: 179 YNLIHHGDHARFHNCLVPSSHQ 200
Y IH DH L ++HQ
Sbjct: 67 YEYIHPSDHDEMTAVL--AAHQ 86
>ZFIN|ZDB-GENE-030131-4490 [details] [associations]
symbol:epas1a "endothelial PAS domain protein 1a"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 ZFIN:ZDB-GENE-030131-4490 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
GeneTree:ENSGT00650000093281 EMBL:CR931998 IPI:IPI00499388
Ensembl:ENSDART00000024415 ArrayExpress:E7FAJ1 Bgee:E7FAJ1
Uniprot:E7FAJ1
Length = 842
Score = 119 (46.9 bits), Expect = 0.00076, P = 0.00076
Identities = 39/129 (30%), Positives = 66/129 (51%)
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQ 118
RR +E ELA + S+SS DK +I++ ++ +R ++ +S VQQ
Sbjct: 26 RRSKETEVFYELAHQLP---LPHSISSHL---DKASIMRLAISFLRT-RKLFSSGHTVQQ 78
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
+ S + N L L++LEGF+ VV DG + F +EN+ F+ ++ E+ G S+
Sbjct: 79 --MRSQNLGQMDN-----LYLKSLEGFVIVVTSDGDMIFLSENVSKFMGLTQVELTGHSI 131
Query: 179 YNLIHHGDH 187
++ H DH
Sbjct: 132 FDFTHPCDH 140
>UNIPROTKB|H7BZX8 [details] [associations]
symbol:SIM2 "Single-minded homolog 2" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000014 InterPro:IPR010578 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF06621 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS51302 SMART:SM00091 InterPro:IPR001610
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0004871
SMART:SM00086 EMBL:AP000697 EMBL:AP000698 HGNC:HGNC:10883
ProteinModelPortal:H7BZX8 Ensembl:ENST00000431229 Uniprot:H7BZX8
Length = 480
Score = 116 (45.9 bits), Expect = 0.00077, P = 0.00077
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
G+ S + P + LG LL+ L+GF+FVV DG + + +E + S+ E+ G S+
Sbjct: 3 GQPSRAGPLDGVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTGNSI 62
Query: 179 YNLIHHGDHARFHNCLVPSSHQ 200
Y IH DH L ++HQ
Sbjct: 63 YEYIHPSDHDEMTAVL--TAHQ 82
>UNIPROTKB|J9P6G5 [details] [associations]
symbol:NPAS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 CTD:4861 KO:K09098 OMA:VYPHLQR
EMBL:AAEX03000848 EMBL:AAEX03000849 EMBL:AAEX03000850
EMBL:AAEX03000851 RefSeq:XP_541539.2 Ensembl:ENSCAFT00000047187
GeneID:484424 KEGG:cfa:484424 Uniprot:J9P6G5
Length = 594
Score = 117 (46.2 bits), Expect = 0.00081, P = 0.00081
Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 126 PTVITNEV----LGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSVYNL 181
P + +EV LG +L++L+GF+F +N +G + +E + ++ S+ E+ G SV++
Sbjct: 127 PMALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDY 186
Query: 182 IHHGDHA 188
IH GDH+
Sbjct: 187 IHPGDHS 193
>ZFIN|ZDB-GENE-040426-1315 [details] [associations]
symbol:hif1al "hypoxia-inducible factor 1, alpha
subunit, like" species:7955 "Danio rerio" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-040426-1315 GO:GO:0005737 GO:GO:0003677 GO:GO:0051402
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 HOGENOM:HOG000234306
HOVERGEN:HBG060456 InterPro:IPR021537 Pfam:PF11413 EMBL:AY330295
IPI:IPI00960923 UniGene:Dr.11978 ProteinModelPortal:Q6EGR9
InParanoid:Q6EGR9 ArrayExpress:Q6EGR9 Uniprot:Q6EGR9
Length = 626
Score = 117 (46.2 bits), Expect = 0.00087, P = 0.00087
Identities = 53/210 (25%), Positives = 86/210 (40%)
Query: 59 RREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAVQQ 118
RR QE ELA + +A DK AI++ T++ +R + + S Q
Sbjct: 25 RRSQETEVFYELAHSLPLPR------RIASHLDKAAIMRVTLSYLR-MNRLIQSGSTKSQ 77
Query: 119 GEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGKSV 178
E S + PT +AL GF+ V+ +G + F +E++ +I ++ E+LG+SV
Sbjct: 78 TEKSET-PT-------DGFYQQALAGFILVMTEEGDMVFLSESVSKYIGITQLELLGQSV 129
Query: 179 YNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAGKRPSLTASTPNRTFNIRLLISST-H 237
Y +H D + L T + + +LT + RT NI+ H
Sbjct: 130 YEFVHPCDQEELRDILATRPGVSKKKTMEHNFFLRMKSTLTHT--GRTVNIKSATWKVLH 187
Query: 238 LTAGLSRAGGENGQDDSGDVSSEGGPCLMC 267
T + G DD S+ L+C
Sbjct: 188 CTGHMQPFSG----DDENSPSAGSFLTLLC 213
>UNIPROTKB|Q7YSE5 [details] [associations]
symbol:Q7YSE5 "Hypoxia inducible factor 1 alpha subunit"
species:9986 "Oryctolagus cuniculus" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
eggNOG:NOG289264 HOGENOM:HOG000234306 HOVERGEN:HBG060456
InterPro:IPR014887 InterPro:IPR021537 Pfam:PF11413 Pfam:PF08778
OrthoDB:EOG40CHGP CTD:3091 EMBL:AY273790 RefSeq:NP_001076251.1
UniGene:Ocu.3329 HSSP:Q16665 ProteinModelPortal:Q7YSE5 SMR:Q7YSE5
STRING:Q7YSE5 GeneID:100009579 Uniprot:Q7YSE5
Length = 819
Score = 118 (46.6 bits), Expect = 0.00095, P = 0.00095
Identities = 49/234 (20%), Positives = 103/234 (44%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RR +E+ ELA + ++SS DK ++++ T++ +R +++ + D
Sbjct: 27 RSRRSKESEVFYELAHQLP---LPHNVSSHL---DKASVMRLTISYLR-VRKLLDAGDLD 79
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
+ E+ + + L+AL+GF+ V+ DG + + ++N+ ++ ++ E+ G
Sbjct: 80 IEDEMKAQ---------MNCFYLKALDGFVMVLTDDGDMIYISDNVNKYMGLTQFELTGH 130
Query: 177 SVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAG-KRPSLTASTPNRTFNIRLLISS 235
SV++ H DH L + V + ++ R T ++ RT NI+
Sbjct: 131 SVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIKSATWK 190
Query: 236 T-HLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIP-PTDKQLSAPIEQFT 287
H T + + Q G CL+ + IP P++ ++ P++ T
Sbjct: 191 VLHCTGHIHVYDTNSNQSQCG-YKKPPMTCLVLICEPIPHPSNIEI--PLDSKT 241
>UNIPROTKB|Q4ZH58 [details] [associations]
symbol:Q4ZH58 "Hypoxia-inducible factor 1 alpha"
species:64717 "Microtus oeconomus" [GO:0001666 "response to
hypoxia" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035035 "histone acetyltransferase binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001321
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00989 Pfam:PF08447 PRINTS:PR01080 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0001666
GO:GO:0003700 GO:GO:0006351 GO:GO:0004871 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 SUPFAM:SSF47459 GO:GO:0035035
HOVERGEN:HBG060456 InterPro:IPR014887 InterPro:IPR021537
Pfam:PF11413 Pfam:PF08778 EMBL:DQ010149 ProteinModelPortal:Q4ZH58
SMR:Q4ZH58 Uniprot:Q4ZH58
Length = 828
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 49/234 (20%), Positives = 103/234 (44%)
Query: 57 KRRREQENNYIEELAELISAASFAESMSSLAVKPDKCAILQETVNQIRNIKQQETSSDAV 116
+ RR +E+ ELA + ++SS DK ++++ T++ +R +++ + D
Sbjct: 27 RSRRSKESEVFYELAHQLP---LPHNVSSHL---DKASVMRLTISYLR-VRKLLDAGDLD 79
Query: 117 QQGEVSSSKPTVITNEVLGPLLLEALEGFLFVVNPDGYVNFCTENIKSFIRYSRQEVLGK 176
+ E+ + + L+AL+GF+ V+ DG + + ++N+ ++ ++ E+ G
Sbjct: 80 IEDEMKAQ---------MNCFYLKALDGFVMVLTDDGDMIYISDNVNKYMGLTQFELTGH 130
Query: 177 SVYNLIHHGDHARFHNCLVPSSHQVNAWTSDSGGQAG-KRPSLTASTPNRTFNIRLLISS 235
SV++ H DH L + V + ++ R T ++ RT NI+
Sbjct: 131 SVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRGRTMNIKSATWK 190
Query: 236 T-HLTAGLSRAGGENGQDDSGDVSSEGGPCLMCVARRIP-PTDKQLSAPIEQFT 287
H T + + Q G CL+ + IP P++ ++ P++ T
Sbjct: 191 VLHCTGHIHVYDTNSNQSQCG-YKKPPMTCLVLICEPIPHPSNIEI--PLDSKT 241
>UNIPROTKB|F8VS42 [details] [associations]
symbol:NPAS3 "Neuronal PAS domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000014 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0004871 SMART:SM00086 SUPFAM:SSF47459
HGNC:HGNC:19311 EMBL:AL109769 EMBL:AL133305 EMBL:AL139296
EMBL:AL157689 EMBL:AL158802 EMBL:AL161851 EMBL:AL355886
IPI:IPI01021732 ProteinModelPortal:F8VS42 SMR:F8VS42
Ensembl:ENST00000551634 ArrayExpress:F8VS42 Bgee:F8VS42
Uniprot:F8VS42
Length = 906
Score = 120 (47.3 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 45/185 (24%), Positives = 85/185 (45%)
Query: 57 KRRREQENNYIEELAELISA-ASFAESMSSLAVKPDKCAILQ--ETVNQIR---NIKQQ- 109
+ RR +EN ELA+L+ A+ + ++ + L+ + NQ N++ +
Sbjct: 38 RSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEG 97
Query: 110 ---ETSSDAVQQGEVSSSKPTVITNEV----LGPLLLEALEGFLFVVNPDGYVNFCTENI 162
TS + G P+ + EV LG +L++L+GF+F +N +G + +E +
Sbjct: 98 PPPNTSVKVI--GAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYISETV 155
Query: 163 KSFIRYSRQEVLGKSVYNLIHHGDHARFHNCL----VPSSHQVNAWTSDSGGQAGKRPSL 218
++ S+ E+ G SV++ +H GDH L P ++ T++ G + S
Sbjct: 156 SIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSS- 214
Query: 219 TASTP 223
+ TP
Sbjct: 215 QSETP 219
Score = 43 (20.2 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 300 DTSGVSQTHTQYLNKAVACKTSATVWTCPN 329
D G+ +H LNK C T W N
Sbjct: 351 DVEGIRHSHLDLLNKG-QCVTKYYRWMQKN 379
>UNIPROTKB|F6VP83 [details] [associations]
symbol:NPAS3 "Uncharacterized protein" species:9544 "Macaca
mulatta" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] InterPro:IPR000014 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00989 Pfam:PF08447
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0003677 GO:GO:0007626 GO:GO:0006351 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 SUPFAM:SSF47459
GeneTree:ENSGT00700000104038 GO:GO:0042711 OMA:FENPKAA
Ensembl:ENSMMUT00000020820 Uniprot:F6VP83
Length = 913
Score = 120 (47.3 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 45/185 (24%), Positives = 85/185 (45%)
Query: 57 KRRREQENNYIEELAELISA-ASFAESMSSLAVKPDKCAILQ--ETVNQIR---NIKQQ- 109
+ RR +EN ELA+L+ A+ + ++ + L+ + NQ N++ +
Sbjct: 45 RSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEG 104
Query: 110 ---ETSSDAVQQGEVSSSKPTVITNEV----LGPLLLEALEGFLFVVNPDGYVNFCTENI 162
TS + G P+ + EV LG +L++L+GF+F +N +G + +E +
Sbjct: 105 PPPNTSVKVI--GAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYISETV 162
Query: 163 KSFIRYSRQEVLGKSVYNLIHHGDHARFHNCL----VPSSHQVNAWTSDSGGQAGKRPSL 218
++ S+ E+ G SV++ +H GDH L P ++ T++ G + S
Sbjct: 163 SIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASSSS- 221
Query: 219 TASTP 223
+ TP
Sbjct: 222 QSETP 226
Score = 43 (20.2 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 300 DTSGVSQTHTQYLNKAVACKTSATVWTCPN 329
D G+ +H LNK C T W N
Sbjct: 358 DVEGIRHSHLDLLNKG-QCVTKYYRWMQKN 386
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.128 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 383 369 0.00085 117 3 11 23 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 231
No. of states in DFA: 615 (65 KB)
Total size of DFA: 239 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.89u 0.14s 35.03t Elapsed: 00:00:01
Total cpu time: 34.94u 0.15s 35.09t Elapsed: 00:00:02
Start: Thu Aug 15 17:03:49 2013 End: Thu Aug 15 17:03:51 2013
WARNINGS ISSUED: 1