BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7684
(332 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q62415|ASPP1_MOUSE Apoptosis-stimulating of p53 protein 1 OS=Mus musculus GN=Ppp1r13b
PE=1 SV=2
Length = 1087
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/264 (43%), Positives = 168/264 (63%), Gaps = 39/264 (14%)
Query: 29 VELTLGELEDMAVRQQAQIDSQRQLIAAKEQRLRFLKQHEARHQQVAAEHERLRRLRDRV 88
VELTL EL+DMA RQQ QI++Q+Q++ AKEQRL FLKQ E R QQ +E+E+L++L++RV
Sbjct: 124 VELTLSELQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSVSENEKLQKLKERV 183
Query: 89 EQQELKLRKLRALRGQVDQNKMNNISLSSDLESIRALFNEKEKELCMAVAKVEELTHQLE 148
E QE KL+K+RA+RGQVD +K+ N +LS+++E A+F EK++E+ A+ +V++L+ QLE
Sbjct: 184 EAQENKLKKIRAMRGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAILRVDQLSQQLE 243
Query: 149 DLKRGR--THQPSHPHLSA----ELENLRRELMYHNKLSEQQNVRLHQQRETLTKKQAEV 202
DLK+G+ Q + L+ EL+ L +EL N+L+++QN +L QQ+E L K+ EV
Sbjct: 244 DLKKGKLNGFQSYNGRLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKRNMEV 303
Query: 203 NSVDLRISELQERLQRKRLLNQQLASQLNSNINSSQHQLPPGKQQLVAQNSQLTSAHINN 262
+D RISEL+ERL K++ QLN +S Q P L+
Sbjct: 304 AMMDKRISELRERLYGKKI-------QLNRVNGTSSPQSP------------LS------ 338
Query: 263 VNSLFRSMTSSNIAAVAPYLHVPS 286
TS +AAV PY+ VPS
Sbjct: 339 --------TSGRVAAVGPYIQVPS 354
>sp|Q96KQ4|ASPP1_HUMAN Apoptosis-stimulating of p53 protein 1 OS=Homo sapiens GN=PPP1R13B
PE=1 SV=3
Length = 1090
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/264 (43%), Positives = 166/264 (62%), Gaps = 39/264 (14%)
Query: 29 VELTLGELEDMAVRQQAQIDSQRQLIAAKEQRLRFLKQHEARHQQVAAEHERLRRLRDRV 88
VELTL EL+DMA RQQ QI++Q+Q++ AKEQRL FLKQ E R QQ +E+E+L++L++RV
Sbjct: 124 VELTLSELQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERV 183
Query: 89 EQQELKLRKLRALRGQVDQNKMNNISLSSDLESIRALFNEKEKELCMAVAKVEELTHQLE 148
E QE KL+K+RA+RGQVD +K+ N +LS+++E A+F EK++E+ A+ +V++L+ QLE
Sbjct: 184 EAQENKLKKIRAMRGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAILRVDQLSQQLE 243
Query: 149 DLKRGR--THQPSHPHLSA----ELENLRRELMYHNKLSEQQNVRLHQQRETLTKKQAEV 202
DLK+G+ Q + L+ EL+ L +EL N+L+++QN +L QQ+E L K+ EV
Sbjct: 244 DLKKGKLNGFQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKRNMEV 303
Query: 203 NSVDLRISELQERLQRKRLLNQQLASQLNSNINSSQHQLPPGKQQLVAQNSQLTSAHINN 262
+D RISEL+ERL K++ QLN +S Q P
Sbjct: 304 AMMDKRISELRERLYGKKI-------QLNRVNGTSSPQSP-------------------- 336
Query: 263 VNSLFRSMTSSNIAAVAPYLHVPS 286
TS +AAV PY+ VPS
Sbjct: 337 ------LSTSGRVAAVGPYIQVPS 354
>sp|Q13625|ASPP2_HUMAN Apoptosis-stimulating of p53 protein 2 OS=Homo sapiens GN=TP53BP2
PE=1 SV=2
Length = 1128
Score = 157 bits (398), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 168/271 (61%), Gaps = 38/271 (14%)
Query: 29 VELTLGELEDMAVRQQAQIDSQRQLIAAKEQRLRFLKQHEARHQQVAAEHERLRRLRDRV 88
++LTL EL++MA RQQ QI++Q+QL+A KEQRL+FLKQ + R QQ AE E+L+RL++
Sbjct: 124 MDLTLAELQEMASRQQQQIEAQQQLLATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIA 183
Query: 89 EQQELKLRKLRALRGQVDQNKMNNISLSSDLESIRALFNEKEKELCMAVAKVEELTHQLE 148
E QE KL+K+RAL+G V+Q +++N L ++E + LF +K++EL +AV+KVEELT QLE
Sbjct: 184 ENQEAKLKKVRALKGHVEQKRLSNGKLVEEIEQMNNLFQQKQRELVLAVSKVEELTRQLE 243
Query: 149 DLKRGRTHQPSHPHLSA--ELENLRRELMYHNKLSEQQNVRLHQQRETLTKKQAEVNSVD 206
LK GR H + SA EL+ L +EL NKL+++QN +L QQRE L K+ +EV +D
Sbjct: 244 MLKNGRIDS-HHDNQSAVAELDRLYKELQLRNKLNQEQNAKLQQQRECLNKRNSEVAVMD 302
Query: 207 LRISELQERLQRKRLLNQQLASQLNSNIN-SSQHQLPPGKQQLVAQNSQLTSAHINNVNS 265
R++EL++RL +K+ QQ N+ SS LP Q SA
Sbjct: 303 KRVNELRDRLWKKKAALQQ-----KENLPVSSDGNLP----------QQAASA------- 340
Query: 266 LFRSMTSSNIAAVAPYLH------VPSKPNL 290
S +AAV PY+ +PS+P L
Sbjct: 341 ------PSRVAAVGPYIQSSTMPRMPSRPEL 365
>sp|Q8CG79|ASPP2_MOUSE Apoptosis-stimulating of p53 protein 2 OS=Mus musculus GN=Tp53bp2
PE=1 SV=3
Length = 1128
Score = 154 bits (390), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/270 (42%), Positives = 170/270 (62%), Gaps = 36/270 (13%)
Query: 29 VELTLGELEDMAVRQQAQIDSQRQLIAAKEQRLRFLKQHEARHQQVAAEHERLRRLRDRV 88
++LTL EL++MA RQQ QI++Q+Q++A KEQRL+FLKQ + R QQ AAE E+L+RLR+
Sbjct: 124 LDLTLAELQEMASRQQQQIEAQQQMLATKEQRLKFLKQQDQRQQQQAAEQEKLKRLREIA 183
Query: 89 EQQELKLRKLRALRGQVDQNKMNNISLSSDLESIRALFNEKEKELCMAVAKVEELTHQLE 148
E QE KL+K+RAL+G V+Q +++N L ++E + +LF +K++EL +AV+KVEELT QLE
Sbjct: 184 ESQEAKLKKVRALKGHVEQKRLSNGKLVEEIEQMNSLFQQKQRELVLAVSKVEELTRQLE 243
Query: 149 DLKRGRTHQPSHPHLSA--ELENLRRELMYHNKLSEQQNVRLHQQRETLTKKQAEVNSVD 206
LK GR H + SA EL+ L +EL NKL+++QN +L QQRE L K+ +EV +D
Sbjct: 244 MLKNGRIDG-HHDNQSAVAELDRLYKELQLRNKLNQEQNAKLQQQRECLNKRNSEVAVMD 302
Query: 207 LRISELQERLQRKRLLNQQLASQLNSNINSSQHQLPPGKQQLVAQNSQLTSAHINNVNSL 266
R+SEL++RL +K+ QQ + LP V+ + L ++
Sbjct: 303 KRVSELRDRLWKKKAALQQ------------KENLP------VSPDGNLPQQAVS----- 339
Query: 267 FRSMTSSNIAAVAPYLH------VPSKPNL 290
S +AAV PY+ +PS+P L
Sbjct: 340 ----APSRVAAVGPYIQSSTMPRMPSRPEL 365
>sp|P90901|IFA1_CAEEL Intermediate filament protein ifa-1 OS=Caenorhabditis elegans
GN=ifa-1 PE=1 SV=2
Length = 575
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 14/127 (11%)
Query: 112 NISLSSDLESIRALF--------NEKEKELCMAVAKVEELTHQLEDLKRGRTHQPSHPHL 163
N L++DL+++R+ + N E EL A ++E Q +D+ + +
Sbjct: 94 NRKLAADLDALRSKWGKDTHNIRNMYEGELVDAQKLIDETNKQRKDM------EGQLKKM 147
Query: 164 SAELENLRRELMYHNKLSEQQNVRLHQQRETLTKKQAEVNSVDLRISELQERLQRKRLLN 223
EL +RR+L K EQ ++ TL+ +AE++ + RI++L++ ++R + N
Sbjct: 148 QDELAEMRRKLEDATKGREQDRAKIDALLVTLSNLEAEISLLKRRIAQLEDEVKRIKQEN 207
Query: 224 QQLASQL 230
Q+L S+L
Sbjct: 208 QRLLSEL 214
>sp|Q54KI4|EPS15_DICDI Epidermal growth factor receptor substrate 15 homolog
OS=Dictyostelium discoideum GN=eps15 PE=1 SV=1
Length = 1196
Score = 32.7 bits (73), Expect = 4.4, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 20/150 (13%)
Query: 84 LRDRVEQQELKLRKLRA----LRGQVDQNKMNNISLSSDLESIRALFNEKEKELCMAVAK 139
+R+ V+++E+KL ++A L+ Q+ +++ SL S LE +L EK + + +
Sbjct: 566 VRENVKEEEIKLSSIKADNQSLKEQISTARVDIKSLKSQLEQQSSLLREKSE---LFDEQ 622
Query: 140 VEELTHQLEDLKRGRTHQPSHPHLSAELENLRRELMYHNKLSEQQNVRLHQQRETLTKKQ 199
E L+H +DLK + + ++E L + + +Q + Q T+TK
Sbjct: 623 NEALSHLNDDLKEKQQELQKNKQ---QIEQLLSSI----ESIKQNRTDVKNQISTVTK-- 673
Query: 200 AEVNSVDLRISELQERLQRKRLLNQQLASQ 229
++N L + +L E ++++ Q+LA +
Sbjct: 674 -QLNDSKLELKQLAEEQKQQK---QKLAEE 699
>sp|Q9USI6|MYO2_SCHPO Myosin type-2 heavy chain 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=myo2 PE=1 SV=1
Length = 1526
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 97 KLRALRGQVDQNKMNNISLSSDLESIRALFNEKEKELCMAVAKVEELTHQLEDLKRGRT- 155
+L + + K N +L + S++ + NE E EL +KVE L + +LK +
Sbjct: 888 RLANIEDSFSETKQQNENLQRESASLKQINNELESELLEKTSKVETLLSEQNELKEKLSL 947
Query: 156 HQPSHPHLSAELENLRRELMYHNKLSEQQ--NVRLHQQRETLTKKQAEVNSVDLRISELQ 213
+ ELE+LR LSE+ N + +ET+ K AE++ + IS+ +
Sbjct: 948 EEKDLLDTKGELESLREN--NATVLSEKAEFNEQCKSLQETIVTKDAELDKLTKYISDYK 1005
Query: 214 ERLQRKRLLNQQL 226
+Q RL NQ++
Sbjct: 1006 TEIQEMRLTNQKM 1018
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.127 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,918,049
Number of Sequences: 539616
Number of extensions: 4071635
Number of successful extensions: 32726
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 1949
Number of HSP's that attempted gapping in prelim test: 25365
Number of HSP's gapped (non-prelim): 6216
length of query: 332
length of database: 191,569,459
effective HSP length: 118
effective length of query: 214
effective length of database: 127,894,771
effective search space: 27369480994
effective search space used: 27369480994
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)