RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7685
(137 letters)
>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 63
Score = 94.1 bits (234), Expect = 3e-27
Identities = 39/63 (61%), Positives = 51/63 (80%)
Query: 66 ILNNGAVYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRNLLG 125
I+N G +YAL+DYE N DEL K G+C+ ++ + DE+E EWWW++LN+KEGYVPRNLLG
Sbjct: 1 IMNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLG 60
Query: 126 LYP 128
LYP
Sbjct: 61 LYP 63
>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 70.3 bits (172), Expect = 1e-17
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDE-NEREWWWSKLNNKEGYVPRNLLGLYPRV 130
+A+Y ++A N +ELS + + +L D EWW +++N K+GYVP N +
Sbjct: 16 YFAVYTFKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTES- 74
Query: 131 QPSA 134
PS+
Sbjct: 75 GPSS 78
>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 68.2 bits (167), Expect = 4e-17
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRNLLGLYPRVQ 131
V AL+ YEA ++L F+ G+ I+VL K +E W + K G P+ V+
Sbjct: 8 VEALFSYEATQPEDLEFQEGDIILVLSKVNEE---WLEGESKGKVGIFPKVF------VE 58
Query: 132 PSAT 135
SAT
Sbjct: 59 DSAT 62
>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 55
Score = 67.4 bits (165), Expect = 7e-17
Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
V ALYDY+ + E++ K G+ + +L +++ WW ++N+++G+VP
Sbjct: 3 VLALYDYQEKSPREVTMKKGDILTLLNSTNKD---WWKVEVNDRQGFVPAA 50
>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 76
Score = 67.6 bits (165), Expect = 1e-16
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
V A ++++ N DELS G+ I V R + WW LN + G+ P N
Sbjct: 13 VKARFNFKQTNEDELSVCKGDIIYVTRVEEGG---WWEGTLNGRTGWFPSN 60
>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 66.6 bits (163), Expect = 1e-16
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
V AL+D++ EL F+ G+ I V+ D N WW + + G PRN
Sbjct: 4 VQALFDFDPQEDGELGFRRGDFIHVMDNSDPN---WWKGACHGQTGMFPRN 51
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 66.3 bits (162), Expect = 2e-16
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 74 ALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
ALY + + +L F+ G+ I +L+K D WW ++N +EG P N
Sbjct: 6 ALYSFAGEESGDLPFRKGDVITILKKSDSQND-WWTGRVNGREGIFPAN 53
>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 71
Score = 66.8 bits (163), Expect = 2e-16
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
V LY + + +EL+F+ GE + V+ K + + W + G VP+N
Sbjct: 9 VQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKN 59
>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Caenorhabditis
elegans, SEM-5 [TaxId: 6239]}
Length = 58
Score = 65.8 bits (161), Expect = 3e-16
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
V AL+D+ + EL+FK G+ I ++ K D N WW +LNN+ G P N
Sbjct: 5 VQALFDFNPQESGELAFKRGDVITLINKDDPN---WWEGQLNNRRGIFPSN 52
>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 74
Score = 66.0 bits (161), Expect = 4e-16
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRNLLGLYPRVQ 131
AL + A + L+F + I VL E + WW+ +++ G+ P++ + + P +
Sbjct: 13 AQALCSWTAKKDNHLNFSKHDIITVL----EQQENWWFGEVHGGRGWFPKSYVKIIPGSE 68
Query: 132 PS 133
Sbjct: 69 SG 70
>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 65.1 bits (159), Expect = 6e-16
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
ALYD+EA DEL F++GE + VL + + WW +L+NK G P N
Sbjct: 4 ARALYDFEALEEDELGFRSGEVVEVLDSSNPS---WWTGRLHNKLGLFPAN 51
>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 58
Score = 65.1 bits (159), Expect = 6e-16
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
V ALYD+EA +EL+FK GE I VL D N WW + + G P N
Sbjct: 5 VRALYDFEAVEDNELTFKHGELITVLDDSDAN---WWQGENHRGTGLFPSN 52
>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 69
Score = 65.2 bits (159), Expect = 8e-16
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
ALY Y + +L+F GE I+V +K EWW + ++ G P N
Sbjct: 11 YIALYPYSSVEPGDLTFTEGEEILVTQKDG----EWWTGSIGDRSGIFPSN 57
>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 65.8 bits (160), Expect = 1e-15
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRNLLGLYPRVQ 131
A+ Y A DE+S GE + V+ K + WW + ++ GY P L +
Sbjct: 17 YVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDG---WWVIRKDDVTGYFPSMYLQKSGQDV 73
Query: 132 PSATPQ 137
A Q
Sbjct: 74 SQAQRQ 79
>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 98
Score = 65.3 bits (159), Expect = 1e-15
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
V A+YDY ANN DELSF G+ I V+ K D + WW ++N G P N
Sbjct: 37 VIAMYDYAANNEDELSFSKGQLINVMNKDDPD---WWQGEINGVTGLFPSN 84
>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 67
Score = 63.7 bits (155), Expect = 3e-15
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSK-LNNKEGYVPRN 122
V ALYDY N ++L + G+ +L + + WW ++ N +EGY+P N
Sbjct: 11 VVALYDYMPMNANDLQLRKGDEYFILEESNL---PWWRARDKNGQEGYIPSN 59
>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 57
Score = 62.8 bits (153), Expect = 4e-15
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 71 AVY-ALYDYEANNTDELSFKTGECIIVLRKGDENEREWWW--SKLNNKEGYVPRN 122
A++ ALYDYEA D+LSF GE +L + +WW S + GY+P N
Sbjct: 1 ALFVALYDYEAITEDDLSFHKGEKFQILNSSEG---DWWEARSLTTGETGYIPSN 52
>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 62.8 bits (153), Expect = 4e-15
Identities = 21/49 (42%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 74 ALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
A YD++A DELSFK G+ + VL +E ++ W+ ++LN K+G++P+N
Sbjct: 5 AKYDFKATADDELSFKRGDILKVL--NEECDQNWYKAELNGKDGFIPKN 51
>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo
sapiens) [TaxId: 9606]}
Length = 65
Score = 62.9 bits (153), Expect = 4e-15
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWW--SKLNNKEGYVPRN 122
V ALYDYEA + ++LSF+ G+ ++VL + EWW S KEGY+P N
Sbjct: 7 VVALYDYEAIHHEDLSFQKGDQMVVLEESG----EWWKARSLATRKEGYIPSN 55
>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 62.1 bits (151), Expect = 1e-14
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKE-GYVPRN 122
V AL+DY+A DEL+F I + K + WW K+ + P N
Sbjct: 9 VKALFDYKAQREDELTFIKSAIIQNVEKQEGG---WWRGDYGGKKQLWFPSN 57
>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 60
Score = 61.7 bits (150), Expect = 1e-14
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 70 GAVY-ALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKL--NNKEGYVPRN 122
G ++ A+YDY A + DE+SFK G+ II ++ DE W + + + G +P N
Sbjct: 3 GKIFRAMYDYMAADADEVSFKDGDAIINVQAIDEG---WMYGTVQRTGRTGMLPAN 55
>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 61.3 bits (149), Expect = 2e-14
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKL--NNKEGYVPRN 122
A YDY+A +EL+F + II + D+ +WW +L + +G P N
Sbjct: 3 ATAEYDYDAAEDNELTFVENDKIINIEFVDD---DWWLGELEKDGSKGLFPSN 52
>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 57
Score = 60.9 bits (148), Expect = 2e-14
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
ALYD+ A+ + LS GE + VL EW ++ N +G+VP N
Sbjct: 3 FVALYDFVASGDNTLSITKGEKLRVLGYNH--NGEWCEAQTKNGQGWVPSN 51
>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 60.6 bits (147), Expect = 3e-14
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWW--SKLNNKEGYVPRN 122
V AL+ YE ++ +L F+ GE + +L + EWW S +EG++P N
Sbjct: 9 VIALHSYEPSHDGDLGFEKGEQLRILEQSG----EWWKAQSLTTGQEGFIPFN 57
>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 56
Score = 60.3 bits (146), Expect = 4e-14
Identities = 10/49 (20%), Positives = 20/49 (40%)
Query: 74 ALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
LY Y + DE++ G+ I ++ + + + + G VP
Sbjct: 4 VLYAYVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTT 52
>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 93
Score = 61.6 bits (149), Expect = 4e-14
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 74 ALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRNLLGLYPRVQPS 133
ALY +EA N DE+SF +G+ I V K E W + G+ P N + P +
Sbjct: 10 ALYPFEARNHDEMSFNSGDIIQVDEK-TVGEPGWLYGSFQGNFGWFPCNYVEKMPSSENE 68
Query: 134 ATPQ 137
Sbjct: 69 KAVS 72
>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 64
Score = 60.6 bits (147), Expect = 4e-14
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 74 ALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKL--NNKEGYVPRN 122
ALYDYE+ +LSFK GE + ++ + + WW + + GY+P N
Sbjct: 7 ALYDYESRTETDLSFKKGERLQIVNNTEGD---WWLAHSLSTGQTGYIPSN 54
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 57
Score = 60.1 bits (146), Expect = 4e-14
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSK-LNNKEGYVPRN 122
V AL+D+ N+ ++L FK G+ + + K +E WW ++ K G +P
Sbjct: 4 VRALFDFNGNDEEDLPFKKGDILRIRDKPEEQ---WWNAEDSEGKRGMIPVP 52
>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 60.2 bits (146), Expect = 6e-14
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSK-LNNKEGYVPRN 122
V A+YD++A +L + G+ I+L K N+ WW ++ EGY+P N
Sbjct: 5 VVAMYDFQATEAHDLRLERGQEYIILEK---NDLHWWRARDKYGSEGYIPSN 53
>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 71
Score = 59.9 bits (145), Expect = 8e-14
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 5/67 (7%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNN-KEGYVPRNLLGLYPRV 130
A Y++ +L F G+ + ++ + W+ +K +EG +P N +
Sbjct: 9 CIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDP--NWYKAKNKVGREGIIPANYVQKREG- 65
Query: 131 QPSATPQ 137
A +
Sbjct: 66 -VKAGTK 71
>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 83
Score = 59.2 bits (143), Expect = 2e-13
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 12/63 (19%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGD-ENEREWWW-----------SKLNNKEGYV 119
V A +DY A +TDEL K G+ ++V+ + E + E W +L G
Sbjct: 15 VQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVF 74
Query: 120 PRN 122
P N
Sbjct: 75 PEN 77
>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 59.7 bits (144), Expect = 2e-13
Identities = 14/58 (24%), Positives = 21/58 (36%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRNLLGLYPR 129
AL DY A + L+ G+ + V K R +W + LG +P
Sbjct: 24 AVALQDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPS 81
>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 72
Score = 58.7 bits (142), Expect = 3e-13
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
ALY +A + ELSF G + E W LN K G +P N
Sbjct: 13 AKALYACKAEHDSELSFTAGTVFDNVHPSQEP--GWLEGTLNGKTGLIPEN 61
>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 80
Score = 56.9 bits (137), Expect = 2e-12
Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDEN--EREWWWSKLNNKEGYVPRNLLGLY-P 128
Y A+ +++LS G+ I++L+K + E ++G+ P + + L P
Sbjct: 10 AQVTSAYVASGSEQLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGP 69
Query: 129 RVQPSATP 136
+ ++ P
Sbjct: 70 SSERASGP 77
>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA
1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 72
Score = 56.4 bits (136), Expect = 2e-12
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 72 VYALYDYEA-NNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRN 122
V ++ + A NN LSF G+ + +L +++ + G+ P +
Sbjct: 10 VKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSS 61
>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 67
Score = 55.6 bits (134), Expect = 3e-12
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 72 VYALYDYEANNTD-ELSFKTGECIIVLRKGDE--NEREWWWSKL-NNKEGYVPRN 122
ALYD+ N + E++ K G+ + +L K D + +WW + N GY+P N
Sbjct: 8 ARALYDFVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYN 62
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus
[TaxId: 10090]}
Length = 53
Score = 54.5 bits (131), Expect = 6e-12
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNN-KEGYVPRN 122
V ALYDY+ N+ EL+ + E +L + + WW + N EGY P +
Sbjct: 1 VIALYDYQTNDPQELALRCDEEYYLLDSSEIH---WWRVQDKNGHEGYAPSS 49
>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 53.7 bits (129), Expect = 2e-11
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRNLL 124
A+ DYE + E++ TG+ + V+ K + WW+ ++ K G++P + L
Sbjct: 5 YRAIADYEKTSGSEMALSTGDVVEVVEKSESG---WWFCQMKAKRGWIPASFL 54
>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 59
Score = 53.4 bits (128), Expect = 3e-11
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRNLL 124
+ YD+ A N+ ELS + + +L + W + G+VP N+L
Sbjct: 4 AKSKYDFVARNSSELSVMKDDVLEILDDRRQW---WKVRNASGDSGFVPNNIL 53
>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 53
Score = 53.0 bits (127), Expect = 3e-11
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRNLL 124
A+ Y A DE+S GE + V+ K + WW + ++ GY P L
Sbjct: 3 YVAIKAYTAVEGDEVSLLEGEAVEVIHKLLDG---WWVIRKDDVTGYFPSMYL 52
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel
{Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 96
Score = 53.8 bits (129), Expect = 4e-11
Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 13/72 (18%)
Query: 71 AVYALYDYEANNTDE-------LSFKTGECIIVLRKGDENEREWWWSKL---NNKEGYVP 120
AV Y A D+ +SF+ + + V K + + WW +L + G++P
Sbjct: 23 AVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNND---WWIGRLVKEGCEIGFIP 79
Query: 121 RNLLGLYPRVQP 132
+ R+Q
Sbjct: 80 SPVKLENMRLQH 91
>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 53.7 bits (128), Expect = 4e-11
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGD-ENEREWWWSKLNNKEGYVPRNLLGLYPRV 130
A ++ A ++S G+ + V++K D + W +G+V + L Y
Sbjct: 20 FQAERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYNPR 79
Query: 131 QPSATPQ 137
+ +
Sbjct: 80 RSHSDAS 86
>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 69
Score = 49.9 bits (119), Expect = 6e-10
Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Query: 73 YALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSKL--NNKEGYVPRN 122
Y + L G+ + + + E+ WW + N+ G+ P N
Sbjct: 14 YGIPPPPGAFGPFLRLNPGDIVELTKAEAEH--NWWEGRNTATNEVGWFPCN 63
>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha
subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 83
Score = 49.0 bits (116), Expect = 2e-09
Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 14/77 (18%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKG------------DENEREWWWSK--LNNKEG 117
ALYDY+ +++ G+ + V + E W + G
Sbjct: 6 YRALYDYKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERG 65
Query: 118 YVPRNLLGLYPRVQPSA 134
P + R + S
Sbjct: 66 DFPGTYVEYIGRKKISP 82
>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 96
Score = 47.8 bits (113), Expect = 7e-09
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 7/57 (12%)
Query: 74 ALYDYEA------NNTDELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRNLL 124
A Y Y N EL G+ + V DE+ + L+ + G VP N +
Sbjct: 22 ARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGF-YEGELLDGQRGLVPSNFV 77
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 96
Score = 45.9 bits (108), Expect = 4e-08
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 14/64 (21%)
Query: 72 VYALYDYEANNTD-----ELSFKTGECIIVLRKGDENEREWWWSKL------NNKEGYVP 120
+ AL+DY+ LSF+ G+ + V+ GDE WW ++ + G++P
Sbjct: 4 IRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEE---WWQARRVHSDSETDDIGFIP 60
Query: 121 RNLL 124
Sbjct: 61 SKRR 64
>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 74
Score = 45.5 bits (107), Expect = 4e-08
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 72 VYALYDYEANNTDELSFKTGECIIVLRKGDENEREWWWSK------LNNKEGYVPRNLLG 125
+ + DY A +E+ GE + VL N++ EG+VP ++L
Sbjct: 10 MTVIKDYYALKENEICVSQGEVVQVLAV---NQQNMCLVYQPASDHSPAAEGWVPGSILA 66
Query: 126 LYPRVQPSA 134
+ PS+
Sbjct: 67 PFSG--PSS 73
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 145
Score = 43.2 bits (101), Expect = 9e-07
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 13/76 (17%)
Query: 71 AVYALYDYEANNTD-------ELSFKTGECIIVLRKGDENEREWWWSKL---NNKEGYVP 120
AV Y + +SF + + + K + + WW +L + G++P
Sbjct: 25 AVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNND---WWIGRLVKEGCEIGFIP 81
Query: 121 RNLLGLYPRVQPSATP 136
L R+Q
Sbjct: 82 SPLRLENIRIQQEQKR 97
>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 136
Score = 39.6 bits (92), Expect = 2e-05
Identities = 10/77 (12%), Positives = 24/77 (31%), Gaps = 13/77 (16%)
Query: 71 AVYALYDYEANNTD-------ELSFKTGECIIVLRKGDENEREWWWSKL---NNKEGYVP 120
AV Y + ++F+ + + + K + WW +L ++P
Sbjct: 25 AVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSND---WWIGRLVKEGGDIAFIP 81
Query: 121 RNLLGLYPRVQPSATPQ 137
R++ +
Sbjct: 82 SPQRLESIRLKQEQKAR 98
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 35.8 bits (81), Expect = 5e-04
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 28 IFATTHSDHETAAVKCEEDEEGFEGCSEFLYSVQEKLG 65
+FA T+SD +TAA KCEE EEG+ CS+FLY VQEK+G
Sbjct: 93 VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 130
>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein
adap) {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 28.2 bits (63), Expect = 0.11
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 85 ELSFKTGECIIVLRKGDENEREWWWSKLNNKEGYVPRNLL 124
+L K GE + V++ D+ + K GYV R+ L
Sbjct: 38 DLQVKPGESLEVIQTTDDT--KVLCRNEEGKYGYVLRSYL 75
>d1j36a_ d.92.1.5 (A:) Angiotensin converting enzyme, ACE {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 598
Score = 24.7 bits (53), Expect = 5.2
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 55 EFLYSVQEKLGILNNGAVYALYDYEANNTDE 85
E+L ++ ++L N A + Y + TDE
Sbjct: 5 EYLENLNKELAKRTNVETEAAWAYRSAITDE 35
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.422
Gapped
Lambda K H
0.267 0.0623 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 552,439
Number of extensions: 22139
Number of successful extensions: 141
Number of sequences better than 10.0: 1
Number of HSP's gapped: 102
Number of HSP's successfully gapped: 59
Length of query: 137
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 61
Effective length of database: 1,364,116
Effective search space: 83211076
Effective search space used: 83211076
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (22.5 bits)