Your job contains 1 sequence.
>psy7694
MLGTNLRASILFINMGVRLFRAQQRIQNAHLLSRPITQQDIDTINQSTTDNSPESRIYMS
RLNQAIHEKQNGGGEKQNGDQDGGRKFFKQDGRPLNMNQANIDFRLENERDRYVLTVHVY
RYLDTSLLDVDVQPNYVRVTIKNKVLQLALDDTVLTDKSYAQRSEATRHLVVTMPKESGR
AVLGQNETVKKTSPKKDTPNQKSNPDQPPVSNQREYLEIGKSIHYENMDFSQIYANSELP
ALELNSWIKQLDWLTSWARPSGNYLALVFLVGLHINCEENPISNDHNANSASNSVQEIIL
GTYIMKSNIYQDENEVQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7694
(317 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q1RMR5 - symbol:LRRC6 "Protein TILB homolog" sp... 299 3.0e-26 1
UNIPROTKB|F1RRU0 - symbol:LRRC6 "Uncharacterized protein"... 294 1.1e-25 1
UNIPROTKB|Q86X45 - symbol:LRRC6 "Protein TILB homolog" sp... 282 2.4e-24 1
MGI|MGI:1859553 - symbol:Lrrc6 "leucine rich repeat conta... 276 1.2e-23 1
FB|FBgn0014395 - symbol:tilB "touch insensitive larva B" ... 264 8.7e-23 1
UNIPROTKB|F1NUJ0 - symbol:LRRC6 "Uncharacterized protein"... 267 1.3e-22 1
ZFIN|ZDB-GENE-040827-2 - symbol:lrrc6 "leucine rich repea... 265 1.5e-22 1
UNIPROTKB|Q9NJE9 - symbol:lrrc6 "Protein TILB homolog" sp... 143 3.3e-07 1
>UNIPROTKB|Q1RMR5 [details] [associations]
symbol:LRRC6 "Protein TILB homolog" species:9913 "Bos
taurus" [GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0000240 "diplotene" evidence=IEA] [GO:0000239 "pachytene"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005737
GO:GO:0005929 GO:GO:0008584 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 PROSITE:PS51203 GO:GO:0000239
GeneTree:ENSGT00590000083127 EMBL:DAAA02037595 EMBL:BC114759
IPI:IPI00690048 RefSeq:NP_001069372.1 UniGene:Bt.39868
ProteinModelPortal:Q1RMR5 Ensembl:ENSBTAT00000048498 GeneID:527979
KEGG:bta:527979 CTD:23639 eggNOG:NOG294986 HOGENOM:HOG000258801
HOVERGEN:HBG053229 InParanoid:Q1RMR5 OMA:DFDGYRQ OrthoDB:EOG40P46N
NextBio:20874708 GO:GO:0000240 Uniprot:Q1RMR5
Length = 472
Score = 299 (110.3 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 76/187 (40%), Positives = 108/187 (57%)
Query: 38 QQDIDTINQSTTDNSPESRIYMSRLNQAIHEKQNGGGEKQNGDQDGGRKFFKQDGRPLNM 97
+ D++ N+ + +PESR+ R + Q EK+ + R +DGR LN+
Sbjct: 248 EDDLEFWNKPSL-YTPESRLETLRHMEKQRRDQERLSEKKKKVKPP-RMLVTEDGRALNV 305
Query: 98 NQANIDFRLENE--RDRYVLTVHVYRYLDTSLLDVDVQPNYVRVTIKNKVLQLALDDTVL 155
N+ +DF L+++ R++ VL + VYRY+DTSL+DVDVQP YVRV +K K QL L V
Sbjct: 306 NEPKLDFTLKDDEKRNQIVLDLAVYRYMDTSLIDVDVQPTYVRVMVKGKPFQLILPAEVK 365
Query: 156 TDKSYAQRSEATRHLVVTMPKESGRAVLGQNETVKKTSPKKDTPNQKSNPDQPPVSNQRE 215
D S+A+RS+ T HLVV MPK G ++G T K P K TP+ S+ +Q S Q E
Sbjct: 366 PDSSFAKRSQTTGHLVVCMPKV-GEVIIGCQRTSK---PVKSTPD--SSKEQTSKSQQME 419
Query: 216 YLEIGKS 222
LE+ S
Sbjct: 420 RLEVDPS 426
>UNIPROTKB|F1RRU0 [details] [associations]
symbol:LRRC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008584 "male gonad development" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000240 "diplotene"
evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005737 GO:GO:0008584
InterPro:IPR003603 SMART:SM00446 GO:GO:0000239
GeneTree:ENSGT00590000083127 OMA:DFDGYRQ GO:GO:0000240
EMBL:CU138495 EMBL:CU466322 Ensembl:ENSSSCT00000006535
Uniprot:F1RRU0
Length = 472
Score = 294 (108.6 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 80/181 (44%), Positives = 100/181 (55%)
Query: 51 NSPESRIYMSRLNQAIH-EKQNGGGEKQNGDQDG---GRKFFKQDGRPLNMNQANIDFRL 106
N P SRL H EKQ EK +G + R +DGR LN+N+ +DF L
Sbjct: 254 NKPSLHTPESRLETLRHMEKQRKDQEKLSGKKKKVKPPRVLITEDGRALNVNEPKLDFSL 313
Query: 107 ENE--RDRYVLTVHVYRYLDTSLLDVDVQPNYVRVTIKNKVLQLALDDTVLTDKSYAQRS 164
+++ R++ VL + VYRY+DTSL+DVDVQP YVRVT+K K QL L V D S AQRS
Sbjct: 314 KDDEKRNQIVLDLAVYRYMDTSLIDVDVQPTYVRVTVKGKPFQLVLPAEVKPDSSSAQRS 373
Query: 165 EATRHLVVTMPKESGRAVLGQNETVKKTSPK-KDTPNQKSNPDQPPVSNQREYLEIGKSI 223
+ T HLVV MPK G V G + TSP K TP+ + S Q E LE+ S
Sbjct: 374 QTTGHLVVCMPKV-GELVTG----CQGTSPSVKSTPD-RGRAQTRQRSQQVERLEVDPSK 427
Query: 224 H 224
H
Sbjct: 428 H 428
>UNIPROTKB|Q86X45 [details] [associations]
symbol:LRRC6 "Protein TILB homolog" species:9606 "Homo
sapiens" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0005929 "cilium" evidence=IDA]
[GO:0036158 "outer dynein arm assembly" evidence=IMP] [GO:0060287
"epithelial cilium movement involved in determination of left/right
asymmetry" evidence=IMP] [GO:0044458 "motile cilium assembly"
evidence=IMP] [GO:0003341 "cilium movement" evidence=IMP]
[GO:0061458 "reproductive system development" evidence=IMP]
[GO:0030317 "sperm motility" evidence=IMP] [GO:0036159 "inner
dynein arm assembly" evidence=IMP] [GO:0000239 "pachytene"
evidence=ISS] [GO:0000240 "diplotene" evidence=ISS] [GO:0008584
"male gonad development" evidence=ISS] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005929 GO:GO:0008584
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
InterPro:IPR007052 PROSITE:PS51203 GO:GO:0000239 CTD:23639
eggNOG:NOG294986 HOGENOM:HOG000258801 HOVERGEN:HBG053229
OMA:DFDGYRQ OrthoDB:EOG40P46N GO:GO:0000240 EMBL:U60666
EMBL:BC027589 EMBL:BC047286 IPI:IPI00180190 IPI:IPI00651698
RefSeq:NP_036604.2 UniGene:Hs.591865 ProteinModelPortal:Q86X45
SMR:Q86X45 STRING:Q86X45 PhosphoSite:Q86X45 DMDM:134047813
PaxDb:Q86X45 PRIDE:Q86X45 Ensembl:ENST00000250173
Ensembl:ENST00000519595 GeneID:23639 KEGG:hsa:23639 UCSC:uc003ytk.3
GeneCards:GC08M133653 HGNC:HGNC:16725 HPA:HPA021640 HPA:HPA028058
MIM:614930 MIM:614935 neXtProt:NX_Q86X45 PharmGKB:PA134921522
InParanoid:Q86X45 PhylomeDB:Q86X45 GenomeRNAi:23639 NextBio:46433
ArrayExpress:Q86X45 Bgee:Q86X45 CleanEx:HS_LRRC6
Genevestigator:Q86X45 GermOnline:ENSG00000129295 Uniprot:Q86X45
Length = 466
Score = 282 (104.3 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 68/173 (39%), Positives = 93/173 (53%)
Query: 52 SPESRIYMSRLNQAIHEKQNGGGEKQNGDQDGGRKFFKQDGRPLNMNQANIDFRLENERD 111
+PESR+ R + +KQ EK+ + R +DG+ LN+N+ IDF L++
Sbjct: 257 TPESRLETLRHMEKQRKKQEKLSEKKKKVKPP-RTLITEDGKALNVNEPKIDFSLKDNEK 315
Query: 112 RYVLTVHVYRYLDTSLLDVDVQPNYVRVTIKNKVLQLALDDTVLTDKSYAQRSEATRHLV 171
+ +L + VYRY+DTSL+DVDVQP YVRV IK K QL L V D S A+RS+ T HLV
Sbjct: 316 QIILDLAVYRYMDTSLIDVDVQPTYVRVMIKGKPFQLVLPAEVKPDSSSAKRSQTTGHLV 375
Query: 172 VTMPKESGRAVLGQNETVKKTSPKKDTPNQKSNPDQPPVSNQREYLEIGKSIH 224
+ MPK G + G K D +++N S E LE+ S H
Sbjct: 376 ICMPKV-GEVITGGQRAFKSMKTTSDRSREQTNTR----SKHMEKLEVDPSKH 423
>MGI|MGI:1859553 [details] [associations]
symbol:Lrrc6 "leucine rich repeat containing 6 (testis)"
species:10090 "Mus musculus" [GO:0003341 "cilium movement"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005929 "cilium"
evidence=ISO] [GO:0030317 "sperm motility" evidence=ISO]
[GO:0036158 "outer dynein arm assembly" evidence=ISO] [GO:0036159
"inner dynein arm assembly" evidence=ISO] [GO:0042995 "cell
projection" evidence=IEA] [GO:0044458 "motile cilium assembly"
evidence=ISO] [GO:0060287 "epithelial cilium movement involved in
determination of left/right asymmetry" evidence=ISO] [GO:0061458
"reproductive system development" evidence=ISO] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1859553 GO:GO:0005737 GO:GO:0005929
GO:GO:0008584 InterPro:IPR003603 SMART:SM00446 PROSITE:PS51203
GO:GO:0000239 GeneTree:ENSGT00590000083127 CTD:23639
eggNOG:NOG294986 HOGENOM:HOG000258801 HOVERGEN:HBG053229
OMA:DFDGYRQ OrthoDB:EOG40P46N GO:GO:0000240 EMBL:AF092208
EMBL:AK016236 EMBL:AK077124 EMBL:BC046277 IPI:IPI00136603
RefSeq:NP_062330.1 UniGene:Mm.244890 ProteinModelPortal:O88978
SMR:O88978 PhosphoSite:O88978 PRIDE:O88978
Ensembl:ENSMUST00000023006 GeneID:54562 KEGG:mmu:54562
UCSC:uc011ztm.1 InParanoid:O88978 NextBio:311380 Bgee:O88978
CleanEx:MM_LRRC6 Genevestigator:O88978
GermOnline:ENSMUSG00000022375 Uniprot:O88978
Length = 473
Score = 276 (102.2 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 69/175 (39%), Positives = 100/175 (57%)
Query: 52 SPESRIYMSRLNQAIHEKQNGGGEKQNGDQDGGRKFFKQDGRPLNMNQANIDFRLENER- 110
+PESR+ R + + Q+ EK+ + R +DG+ LN+N+A +DF L+++
Sbjct: 261 TPESRLETLRHMEKQRKAQDKLSEKKKKAKPP-RTLITEDGKVLNVNEAKLDFSLKDDEK 319
Query: 111 -DRYVLTVHVYRYLDTSLLDVDVQPNYVRVTIKNKVLQLALDDTVLTDKSYAQRSEATRH 169
++ +L + VYRY+DTSL++VDVQP YVRV +K K QLAL V D+S A+RS+ T H
Sbjct: 320 HNQIILDLAVYRYMDTSLIEVDVQPTYVRVMVKGKPFQLALSTEVQPDRSSAKRSQTTGH 379
Query: 170 LVVTMPKESGRAVLGQNETVKKTSPKKDTPNQKSNPDQPPVSNQREYLEIGKSIH 224
L++ MPK G + G T TS K T + S P Q E LE+ S H
Sbjct: 380 LLICMPKV-GEMITGGQRT--PTSVK--TTSTSSREQTNPRKKQIERLEVDPSKH 429
>FB|FBgn0014395 [details] [associations]
symbol:tilB "touch insensitive larva B" species:7227
"Drosophila melanogaster" [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0045433 "male courtship behavior, veined wing
generated song production" evidence=IMP] [GO:0010378 "temperature
compensation of the circadian clock" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0035083 "cilium axoneme assembly"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005737
GO:GO:0019861 GO:GO:0030425 EMBL:AE014298 GO:GO:0007605
GO:GO:0031514 InterPro:IPR003603 SMART:SM00446 GO:GO:0045433
PROSITE:PS51203 GO:GO:0060285 GO:GO:0060286 GO:GO:0035083
GO:GO:0010378 GeneTree:ENSGT00590000083127 OMA:DFDGYRQ
RefSeq:NP_608460.1 HSSP:Q9XHH2 ProteinModelPortal:Q9VR52 SMR:Q9VR52
IntAct:Q9VR52 MINT:MINT-1571663 STRING:Q9VR52
EnsemblMetazoa:FBtr0077345 GeneID:33130 KEGG:dme:Dmel_CG14620
UCSC:CG14620-RA CTD:33130 FlyBase:FBgn0014395 InParanoid:Q9VR52
PhylomeDB:Q9VR52 GenomeRNAi:33130 NextBio:782055 Bgee:Q9VR52
Uniprot:Q9VR52
Length = 395
Score = 264 (98.0 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 76/228 (33%), Positives = 117/228 (51%)
Query: 17 VRLFRAQQRIQNAHLLSRPITQQDIDTINQSTTDNSPESRIYMSRLNQAIHEKQNGGGEK 76
+R+ + Q + H ++ I Q+ +++ PE R ++R ++ E+ K
Sbjct: 185 IRVAKQQSALAE-HCAGIEDEEERIKAFWQAKSEHCPEIRTEIARQHRLGRERHE---TK 240
Query: 77 QNGDQ-DGGRKFFKQDGRPLNMNQANIDFRLENERDRYVLTVHVYRYLDTSLLDVDVQPN 135
D R F GRP N+NQA + F+ +E D Y+L + VYR+LDTSL+DVDVQ
Sbjct: 241 SPLDPLKPQRNLFAPCGRPYNLNQAKLPFKFRDEADHYLLQLEVYRHLDTSLIDVDVQTT 300
Query: 136 YVRVTIKNKVLQLALDDTVLTDKSYAQRSEATRHLVVTMPKESGRAVLGQNET-VKKTSP 194
Y RVT+K K+ Q+A + V D+S QRS+ T HLVV + K L NE + K SP
Sbjct: 301 YTRVTVKKKIFQIAYSEEVKPDESTVQRSQITGHLVVNLKK------LKVNELLIAKKSP 354
Query: 195 KKDTPNQKSNPDQPPVSNQREYLEIGKSIHYENMDFSQIYANSELPAL 242
K +P P + +++ + ++ H +D S I A +LP L
Sbjct: 355 TK-------SPAAPFDAGKKDG-KPEEAFHGGVVDISNICAPEDLPDL 394
>UNIPROTKB|F1NUJ0 [details] [associations]
symbol:LRRC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000239 "pachytene" evidence=IEA] [GO:0000240
"diplotene" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005737 InterPro:IPR003603
SMART:SM00446 GO:GO:0000239 GeneTree:ENSGT00590000083127
OMA:DFDGYRQ GO:GO:0000240 EMBL:AADN02022395 EMBL:AADN02022396
IPI:IPI00591961 Ensembl:ENSGALT00000026196 Uniprot:F1NUJ0
Length = 476
Score = 267 (99.0 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 70/196 (35%), Positives = 102/196 (52%)
Query: 46 QSTTDNSPESRIYMSR-LNQAIHEKQNGGGEKQNGDQDGGRKFFKQDGRPLNMNQANIDF 104
+ T +PESR+ R + + K N G K+ + K +G+ LN+N + F
Sbjct: 256 EEPTPYTPESRLETHRYIEEKRKAKDNIRGSKKR--EKPLPKLVTAEGKVLNINMPKLHF 313
Query: 105 RLEN--ERDRYVLTVHVYRYLDTSLLDVDVQPNYVRVTIKNKVLQLALDDTVLTDKSYAQ 162
L++ E ++++L + VYR+LDTSLLD+DVQP Y+RV +K K QL L + V D S A+
Sbjct: 314 SLKDDEENNQFILDLAVYRHLDTSLLDIDVQPTYIRVLVKGKTFQLVLPEEVKPDSSSAK 373
Query: 163 RSEATRHLVVTMPKESGRAVLGQNETVKKTSPKKDTPNQKSNPDQPPVSNQREYLEIGKS 222
RS+ T HLVV+MPK +L + + P QKS S Q E LE+ S
Sbjct: 374 RSQTTGHLVVSMPKVK-EIILAKQKLSTSVKPSNSNTTQKSTR-----SKQVEKLEVDPS 427
Query: 223 IHYENMDFSQIYANSE 238
Y D ++I E
Sbjct: 428 -KYSFPDVTKIIPEKE 442
>ZFIN|ZDB-GENE-040827-2 [details] [associations]
symbol:lrrc6 "leucine rich repeat containing 6"
species:7955 "Danio rerio" [GO:0060294 "cilium movement involved in
cell motility" evidence=IMP] [GO:0048793 "pronephros development"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007368 "determination of left/right symmetry" evidence=IMP]
[GO:0001947 "heart looping" evidence=IMP] [GO:0003143 "embryonic
heart tube morphogenesis" evidence=IMP] [GO:0003146 "heart jogging"
evidence=IMP] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0005929 "cilium" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0001539 "ciliary or flagellar motility"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040827-2 GO:GO:0005737 GO:GO:0042384 GO:GO:0001947
GO:GO:0009953 InterPro:IPR003603 SMART:SM00446 GO:GO:0060027
GO:GO:0003146 GO:GO:0048793 GeneTree:ENSGT00590000083127
OMA:DFDGYRQ EMBL:CR848710 EMBL:BX511268 IPI:IPI00503760
Ensembl:ENSDART00000075347 Ensembl:ENSDART00000132346 GO:GO:0060294
Uniprot:F1Q7C0
Length = 440
Score = 265 (98.3 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 67/170 (39%), Positives = 97/170 (57%)
Query: 52 SPESRIYMSRLNQAIHEKQNGGG-EKQNGDQDGGRKFFKQDGRPLNMNQANIDFRL-ENE 109
+PESR+ R + EK+ EK+ R DGR LN+N+ +DF L E+E
Sbjct: 233 TPESRLEAHR---HLEEKRRANEKEKEKPKTKTPRTLITPDGRVLNVNEPKLDFSLSEDE 289
Query: 110 RDRYVLTVHVYRYLDTSLLDVDVQPNYVRVTIKNKVLQLALDDTVLTDKSYAQRSEATRH 169
+ +L ++VYR++D+SLLDVDVQP YVRVT+K KV QL L V D S AQRS+ T H
Sbjct: 290 NNCLLLDLNVYRHMDSSLLDVDVQPMYVRVTVKGKVFQLVLPAEVKPDSSSAQRSQTTGH 349
Query: 170 LVVTMPKESGRAVLGQNETVKKTSPKKDTPNQKSNPDQPPVSNQREYLEI 219
L++ +P + V + +++ TS + N+K P +RE LE+
Sbjct: 350 LLLILPL-ANEDVKPKKRSIRPTSVTSNQNNKKDTRAAP----RRELLEV 394
>UNIPROTKB|Q9NJE9 [details] [associations]
symbol:lrrc6 "Protein TILB homolog" species:5702
"Trypanosoma brucei brucei" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005856 "cytoskeleton" evidence=IDA] [GO:0005932 "microtubule
basal body" evidence=IDA] [GO:0031514 "motile cilium" evidence=IDA]
[GO:0032054 "microtubule basal body duplication" evidence=IMP]
[GO:0043064 "flagellum organization" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=IMP] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0007275 GO:GO:0005737 GO:GO:0019861
GO:GO:0007049 GO:GO:0051726 GO:GO:0005932 GO:GO:0031514
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
GO:GO:0043064 HSSP:Q9XHH2 EMBL:AF152174 ProteinModelPortal:Q9NJE9
GO:GO:0032054 Uniprot:Q9NJE9
Length = 383
Score = 143 (55.4 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 34/87 (39%), Positives = 48/87 (55%)
Query: 92 GRPLNMNQANIDFRLENERD---RYVLTVHVYRYLDTSLLDVDVQPNYVRVTIKNKVLQL 148
GR L N+ + F L+ E D VLTV V R+L T+L+DV V+ NY+RV +K K++Q+
Sbjct: 264 GRLLLRNEPKLPFTLDEEADDGEAVVLTVKVPRFLSTTLIDVQVEVNYIRVFVKEKLIQV 323
Query: 149 ALDDTVLTDKSYAQRSEATRHLVVTMP 175
L V QRS L + +P
Sbjct: 324 PLSQEVAPSGVNVQRSSVNGELRIRIP 350
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 317 305 0.00098 115 3 11 22 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 613 (65 KB)
Total size of DFA: 213 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.51u 0.14s 29.65t Elapsed: 00:00:02
Total cpu time: 29.51u 0.14s 29.65t Elapsed: 00:00:02
Start: Thu Aug 15 17:24:50 2013 End: Thu Aug 15 17:24:52 2013