BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7704
(124 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
LA HP +QQ++ +EI VL + + PTYD + ++ L V+ ETLRL+P A + R
Sbjct: 299 LATHPDVQQKLQEEIDAVLPN--KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCK 356
Query: 62 SEIQADKYTIPIG 74
+++ + IP G
Sbjct: 357 KDVEINGMFIPKG 369
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
LA HP +QQ++ +EI VL + + PTYD + ++ L V+ ETLRL+P A + R
Sbjct: 300 LATHPDVQQKLQEEIDAVLPN--KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCK 357
Query: 62 SEIQADKYTIPIG 74
+++ + IP G
Sbjct: 358 KDVEINGMFIPKG 370
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
LA HP +QQ++ +EI VL + + PTYD + ++ L V+ ETLRL+P A + R
Sbjct: 301 LATHPDVQQKLQEEIDAVLPN--KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCK 358
Query: 62 SEIQADKYTIPIG 74
+++ + IP G
Sbjct: 359 KDVEINGMFIPKG 371
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVP--TYDQIQELHLLTRVIKETLRLYPAAPIIGR 58
LA +Q++ Y E V G E +P TYDQ+++L+LL R IKETLRL P I+ R
Sbjct: 278 FLARDKTLQKKCYLEQKTVCG---ENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMR 334
Query: 59 HITSEIQADKYTIPIG 74
+ YTIP G
Sbjct: 335 MARTPQTVAGYTIPPG 350
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+V +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKVAEEATRVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 40.4 bits (93), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 2 LALHPKIQQEVYDEIVQV---LGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGR 58
LA +P +QQ + E + + + P+ T EL LL +KETLRLYP + R
Sbjct: 304 LARNPDVQQILRQESLAAAASISEHPQKATT-----ELPLLRAALKETLRLYPVGLFLER 358
Query: 59 HITSEIQADKYTIPIG 74
++S++ Y IP G
Sbjct: 359 VVSSDLVLQNYHIPAG 374
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
LA HP+ + DE+ V G P ++ +++L VI E +RL PA ++ R
Sbjct: 290 LADHPEHADRIRDEVEAVTGGRPVA---FEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAV 346
Query: 62 SEIQADKYTIPIG 74
+E + Y IP G
Sbjct: 347 AESELGGYRIPAG 359
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 280 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 333
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 282 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 335
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 285 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 338
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 280 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 333
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 280 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 333
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 280 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 333
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAP 54
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 280 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAP 330
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P +P
Sbjct: 282 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTSPAFS 335
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LR++P AP
Sbjct: 280 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRIWPTAPAFS 333
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P P
Sbjct: 279 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTGPAFS 332
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P P
Sbjct: 280 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTGPAFS 333
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P + Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P P
Sbjct: 282 FLVKNPHVLQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTVPAFS 335
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P Q+ +E +VL D VP+Y Q+++L + V+ E LRL+P AP
Sbjct: 279 FLVKNPHELQKAAEEAARVLVD---PVPSYKQVKQLKYVGMVLNEALRLWPTAPAFS 332
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 5 HPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRH 59
+P++++++Y+EI Q +G PT L LL I+E LRL P AP++ H
Sbjct: 303 NPQVKKKLYEEIDQNVGF--SRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPH 355
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
+AL+P IQ +V EI ++G P P++D ++ V+ E LR P+ H T
Sbjct: 300 MALYPNIQGQVQKEIDLIMG--PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHAT 357
Query: 62 SEIQADK-YTIPIG 74
SE + Y+IP G
Sbjct: 358 SEDAVVRGYSIPKG 371
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
+AL+P IQ +V EI ++G P P++D ++ V+ E LR P+ H T
Sbjct: 300 MALYPNIQGQVQKEIDLIMG--PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHAT 357
Query: 62 SEIQADK-YTIPIG 74
SE + Y+IP G
Sbjct: 358 SEDAVVRGYSIPKG 371
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
L+ +P+ Q+ + E+ VL D+ P + ++ + L +KE++RL P+ P R +
Sbjct: 310 LSRNPQAQRRLLQEVQSVLPDN--QTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLD 367
Query: 62 SEIQADKYTIPIG 74
+Y +P G
Sbjct: 368 KPTVLGEYALPKG 380
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHI 60
++A HP +++ + EI V+G+ + D IQ+L ++ I E++R P ++ R
Sbjct: 321 LIAKHPNVEEAIIKEIQTVIGERDIKI---DDIQKLKVMENFIYESMRYQPVVDLVMRKA 377
Query: 61 TSEIQADKYTIPIG 74
+ D Y + G
Sbjct: 378 LEDDVIDGYPVKKG 391
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIG 57
L +P Q+ +E +VL D VP++ Q+++L + V+ E LRL+P AP
Sbjct: 280 FLVKNPHELQKAAEEAARVLVD---PVPSHKQVKQLKYVGMVLNEALRLWPTAPAFS 333
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 33.9 bits (76), Expect = 0.025, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
L+ P+I + E+ +V+G + ++ + L L++V+KE+LRLYP A R +
Sbjct: 270 LSRQPEIVARLQAEVDEVIGS--KRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLE 327
Query: 62 SEIQADKYTIP 72
E D +P
Sbjct: 328 EETLIDGVRVP 338
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 33.5 bits (75), Expect = 0.029, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 5 HPKIQQEVYDEIVQVLGDDPE-TVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSE 63
HP+IQ+ + +E+ + LG + TY L LL I E LRL P P+ H T+
Sbjct: 309 HPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTR 368
Query: 64 IQAD-KYTIPIG 74
+ Y IP G
Sbjct: 369 PSSIFGYDIPEG 380
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 32.3 bits (72), Expect = 0.077, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHI 60
++ LHP +Q+ V EI V+G P + T VI E R P+ H+
Sbjct: 298 LMILHPDVQRRVQQEIDDVIGQVRR--PEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHM 355
Query: 61 TS-EIQADKYTIPIG 74
TS +I+ + IP G
Sbjct: 356 TSRDIEVQGFRIPKG 370
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 32.0 bits (71), Expect = 0.083, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHI 60
++ LHP +Q+ V EI V+G P + T VI E R P+ H+
Sbjct: 298 LMILHPDVQRRVQQEIDDVIGQVRR--PEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHM 355
Query: 61 TS-EIQADKYTIPIG 74
TS +I+ + IP G
Sbjct: 356 TSRDIEVQGFRIPKG 370
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRH 59
+L HP+++ +V++EI +V+G + + P ++ ++ + VI E R P+ + R
Sbjct: 294 LLMKHPEVEAKVHEEIDRVIGKNRQ--PKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARR 351
Query: 60 ITSEIQADKYTIPIG 74
+ + + + +P G
Sbjct: 352 VKKDTKFRDFFLPKG 366
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 31.6 bits (70), Expect = 0.12, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 33 IQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIP 72
+Q + LL IKETLRL+P + + R++ +++ Y IP
Sbjct: 328 LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIP 367
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 31.6 bits (70), Expect = 0.12, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 33 IQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIP 72
+Q + LL IKETLRL+P + + R++ +++ Y IP
Sbjct: 331 LQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIP 370
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 31.6 bits (70), Expect = 0.13, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRH 59
+L HP+++ +V++EI +V+G + + P ++ ++ + VI E R P+ + R
Sbjct: 294 LLMKHPEVEAKVHEEIDRVIGKNRQ--PKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARR 351
Query: 60 ITSEIQADKYTIPIG 74
+ + + + +P G
Sbjct: 352 VKKDTKFRDFFLPKG 366
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 31.6 bits (70), Expect = 0.13, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRH 59
+L HP+++ +V++EI +V+G + + P ++ ++ + VI E R P+ + R
Sbjct: 294 LLMKHPEVEAKVHEEIDRVIGKNRQ--PKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARR 351
Query: 60 ITSEIQADKYTIPIG 74
+ + + + +P G
Sbjct: 352 VKKDTKFRDFFLPKG 366
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 31.6 bits (70), Expect = 0.13, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRH 59
+L HP+++ +V++EI +V+G + + P ++ ++ + VI E R P+ + R
Sbjct: 294 LLMKHPEVEAKVHEEIDRVIGKNRQ--PKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARR 351
Query: 60 ITSEIQADKYTIPIG 74
+ + + + +P G
Sbjct: 352 VKKDTKFRDFFLPKG 366
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 31.6 bits (70), Expect = 0.13, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRH 59
+L HP+++ +V++EI +V+G + + P ++ ++ + VI E R P+ + R
Sbjct: 294 LLMKHPEVEAKVHEEIDRVIGKNRQ--PKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARR 351
Query: 60 ITSEIQADKYTIPIG 74
+ + + + +P G
Sbjct: 352 VKKDTKFRDFFLPKG 366
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 30.4 bits (67), Expect = 0.25, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
L H V DE+ ++ GD ++ ++++ L V+KETLRL+P I+ R
Sbjct: 272 LMRHRDAYAAVIDELDELYGDGRSV--SFHALRQIPQLENVLKETLRLHPPLIILMRVAK 329
Query: 62 SEIQADKYTIPIG 74
E + + I G
Sbjct: 330 GEFEVQGHRIHEG 342
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 30.4 bits (67), Expect = 0.30, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAP 54
+L +P+I++++++EI +V+G P +P QE+ + V+ E R P
Sbjct: 293 ILMKYPEIEEKLHEEIDRVIG--PSRIPAIKDRQEMPYMDAVVHEIQRFITLVP 344
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 30.0 bits (66), Expect = 0.30, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
L H V DE+ ++ GD ++ ++++ L V+KETLRL+P I+ R
Sbjct: 272 LMRHRDAYAAVIDELDELYGDGRSV--SFHALRQIPQLENVLKETLRLHPPLIILMRVAK 329
Query: 62 SEIQADKYTIPIG 74
E + + I G
Sbjct: 330 GEFEVQGHRIHEG 342
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 30.0 bits (66), Expect = 0.31, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
L H V DE+ ++ GD ++ ++++ L V+KETLRL+P I+ R
Sbjct: 272 LMRHRDAYAAVIDELDELYGDGRSV--SFHALRQIPQLENVLKETLRLHPPLIILMRVAK 329
Query: 62 SEIQADKYTIPIG 74
E + + I G
Sbjct: 330 GEFEVQGHRIHEG 342
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
L H V DE+ ++ GD ++ ++++ L V+KETLRL+P I+ R
Sbjct: 272 LMRHRDAYAAVIDELDELYGDGRSV--SFHALRQIPQLENVLKETLRLHPPLIILMRVAK 329
Query: 62 SEIQADKYTIPIG 74
E + + I G
Sbjct: 330 GEFEVQGHRIHEG 342
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 8 IQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQAD 67
+++EV + Q GD + +Q + LL IKETLRL+P + + R+ S++
Sbjct: 313 LREEVLNARRQAEGDISK------MLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQ 366
Query: 68 KYTIP 72
Y IP
Sbjct: 367 DYLIP 371
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 18 QVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRK 76
++L DDPE +P D ++EL LRL + R T ++ TIP GR+
Sbjct: 273 RLLLDDPEGIP--DAVEEL----------LRLTSPVQGLARTTTRDVTIGDTTIPAGRR 319
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 18 QVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRK 76
++L DDPE +P D ++EL LRL + R T ++ TIP GR+
Sbjct: 274 RLLLDDPEGIP--DAVEEL----------LRLTSPVQGLARTTTRDVTIGDTTIPAGRR 320
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 12/59 (20%)
Query: 18 QVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRK 76
++L DDPE +P D ++EL LRL + R T ++ TIP GR+
Sbjct: 273 RLLLDDPEGIP--DAVEEL----------LRLTSPVQGLARTTTRDVTIGDTTIPAGRR 319
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 28.1 bits (61), Expect = 1.5, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRH 59
+L HP+++ +V++EI +V+G + + P ++ ++ VI E R P+ +
Sbjct: 294 LLMKHPEVEAKVHEEIDRVIGKNRQ--PKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHR 351
Query: 60 ITSEIQADKYTIPIG 74
+ + + + +P G
Sbjct: 352 VNKDTKFRDFFLPKG 366
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHIT 61
L ++P++Q+++ +E+ V+G P L + I ET R P H T
Sbjct: 306 LVMNPRVQRKIQEELDTVIGRSRR--PRLSDRSHLPYMEAFILETFRHSSFVPFTIPHST 363
Query: 62 SEIQADK-YTIPIGR 75
+ + K + IP GR
Sbjct: 364 TRDTSLKGFYIPKGR 378
>pdb|3C65|A Chain A, Crystal Structure Of Bacillus Stearothermophilus Uvrc 5'
Endonuclease Domain
Length = 226
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 21 GDDPETVPTYDQIQELHLLTRVIKETLRL 49
GD P+ VP Q QE +LL R+ E R
Sbjct: 129 GDPPDVVPLDRQSQEFYLLQRIQDEVHRF 157
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 26.6 bits (57), Expect = 3.9, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHI 60
++ +P + + VY EI QV+G P P ++ VI E R P+ HI
Sbjct: 294 LMLKYPHVAERVYREIEQVIG--PHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHI 351
Query: 61 TSEIQADK-YTIP 72
++ + + Y IP
Sbjct: 352 VTQHTSFRGYIIP 364
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 25.8 bits (55), Expect = 7.3, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 5 HPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRH-ITSE 63
HP++ +V +EI +V+G + P + V+ E R P H +T +
Sbjct: 299 HPEVTAKVQEEIERVIGRNRS--PCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCD 356
Query: 64 IQADKYTIPIG 74
I+ Y IP G
Sbjct: 357 IKFRNYLIPKG 367
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 25.4 bits (54), Expect = 8.2, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 5 HPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRH-ITSE 63
HP++ +V +EI +V+G + P + V+ E R P H +T +
Sbjct: 297 HPEVTAKVQEEIERVIGRNRS--PCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCD 354
Query: 64 IQADKYTIPIG 74
I+ Y IP G
Sbjct: 355 IKFRNYLIPKG 365
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 25.0 bits (53), Expect = 10.0, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 42 VIKETLRLYPAAPIIGRHITSEIQADKYTIPIG 74
VI+ET+R P ++ R+ ++ +T+P G
Sbjct: 292 VIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKG 324
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.139 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,305,150
Number of Sequences: 62578
Number of extensions: 76512
Number of successful extensions: 360
Number of sequences better than 100.0: 82
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 294
Number of HSP's gapped (non-prelim): 83
length of query: 124
length of database: 14,973,337
effective HSP length: 85
effective length of query: 39
effective length of database: 9,654,207
effective search space: 376514073
effective search space used: 376514073
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)