Query psy7704
Match_columns 124
No_of_seqs 108 out of 1730
Neff 7.6
Searched_HMMs 46136
Date Fri Aug 16 16:42:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7704.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7704hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156|consensus 99.7 7.5E-18 1.6E-22 137.8 7.8 80 1-82 312-392 (489)
2 PLN02971 tryptophan N-hydroxyl 99.7 3.9E-17 8.4E-22 134.3 8.3 79 1-81 353-432 (543)
3 PLN02500 cytochrome P450 90B1 99.7 1E-16 2.3E-21 129.9 8.4 82 1-82 305-389 (490)
4 PLN02290 cytokinin trans-hydro 99.7 1.1E-16 2.4E-21 130.3 8.2 79 1-82 342-420 (516)
5 PLN02183 ferulate 5-hydroxylas 99.7 1.5E-16 3.2E-21 129.9 8.2 80 1-82 330-409 (516)
6 PF00067 p450: Cytochrome P450 99.7 8.2E-17 1.8E-21 125.2 6.0 79 1-81 288-367 (463)
7 PLN02394 trans-cinnamate 4-mon 99.7 1.8E-16 3.9E-21 128.6 7.8 80 1-82 319-399 (503)
8 KOG0158|consensus 99.7 2.9E-16 6.3E-21 128.5 7.9 80 1-82 320-400 (499)
9 PTZ00404 cytochrome P450; Prov 99.7 2.3E-16 4.9E-21 127.5 6.9 80 1-82 309-390 (482)
10 PLN03234 cytochrome P450 83B1; 99.6 4.9E-16 1.1E-20 126.0 8.1 80 1-82 314-394 (499)
11 PLN02774 brassinosteroid-6-oxi 99.6 6.1E-16 1.3E-20 124.7 8.2 81 1-81 290-371 (463)
12 PLN02966 cytochrome P450 83A1 99.6 5.4E-16 1.2E-20 126.1 7.8 82 1-82 315-397 (502)
13 PLN00168 Cytochrome P450; Prov 99.6 6.7E-16 1.5E-20 126.1 7.7 81 1-82 332-413 (519)
14 KOG0159|consensus 99.6 5.9E-16 1.3E-20 126.1 6.7 81 1-82 342-422 (519)
15 PLN02738 carotene beta-ring hy 99.6 9.4E-16 2E-20 128.7 8.0 79 1-82 417-495 (633)
16 PLN00110 flavonoid 3',5'-hydro 99.6 1.2E-15 2.7E-20 124.5 7.9 80 1-82 315-395 (504)
17 PLN03112 cytochrome P450 famil 99.6 1.1E-15 2.3E-20 124.5 7.4 79 1-81 322-401 (514)
18 PLN03018 homomethionine N-hydr 99.6 1.7E-15 3.7E-20 124.7 8.2 80 1-82 340-420 (534)
19 PLN02687 flavonoid 3'-monooxyg 99.6 1.8E-15 3.9E-20 123.5 8.2 80 1-82 323-403 (517)
20 PLN02426 cytochrome P450, fami 99.6 1.9E-15 4E-20 123.6 8.0 81 1-82 319-400 (502)
21 PLN02655 ent-kaurene oxidase 99.6 1.8E-15 3.9E-20 122.1 7.6 78 1-81 288-366 (466)
22 PLN03141 3-epi-6-deoxocathaste 99.6 3.1E-15 6.8E-20 120.2 8.3 82 1-82 277-360 (452)
23 KOG0157|consensus 99.6 3E-15 6.5E-20 122.4 7.5 82 1-83 317-399 (497)
24 PLN03195 fatty acid omega-hydr 99.6 3.2E-15 6.9E-20 121.9 6.6 81 1-81 318-417 (516)
25 PLN02196 abscisic acid 8'-hydr 99.6 7.2E-15 1.6E-19 118.6 7.8 81 1-81 290-371 (463)
26 PLN02936 epsilon-ring hydroxyl 99.5 1.4E-14 3.1E-19 117.7 7.7 79 1-82 304-383 (489)
27 PLN02169 fatty acid (omega-1)- 99.5 1.1E-14 2.3E-19 118.9 6.9 74 1-82 327-401 (500)
28 PLN02302 ent-kaurenoic acid ox 99.5 1.9E-14 4.1E-19 116.0 7.8 81 1-81 313-395 (490)
29 PLN02987 Cytochrome P450, fami 99.5 4E-14 8.6E-19 115.0 8.1 81 1-81 293-374 (472)
30 PLN02648 allene oxide synthase 99.5 1.9E-13 4.1E-18 111.7 7.8 80 1-81 298-382 (480)
31 KOG0684|consensus 99.4 1.2E-12 2.6E-17 105.4 6.6 81 1-82 299-383 (486)
32 COG2124 CypX Cytochrome P450 [ 98.8 5.1E-09 1.1E-13 84.0 5.0 62 2-81 263-324 (411)
33 PF12508 DUF3714: Protein of u 78.4 0.98 2.1E-05 33.4 0.9 42 37-79 53-94 (200)
34 TIGR03779 Bac_Flav_CT_M Bacter 61.1 3.8 8.3E-05 33.5 0.8 23 59-81 277-299 (410)
35 PF07971 Glyco_hydro_92: Glyco 48.5 42 0.00092 28.2 5.0 78 4-83 380-460 (502)
36 TIGR03244 arg_catab_AstA argin 29.5 47 0.001 26.6 2.4 52 1-53 145-211 (336)
37 PRK06789 flagellar motor switc 28.2 88 0.0019 19.4 3.0 40 42-81 21-63 (74)
38 PF11012 DUF2850: Protein of u 24.5 65 0.0014 20.3 1.9 46 44-89 16-66 (79)
39 PF11138 DUF2911: Protein of u 23.9 90 0.0019 21.9 2.7 22 59-80 51-72 (145)
40 KOG4616|consensus 23.4 2.4E+02 0.0053 19.0 5.1 70 2-87 3-80 (137)
41 PF05952 ComX: Bacillus compet 20.8 20 0.00044 21.2 -0.9 21 1-21 8-28 (57)
No 1
>KOG0156|consensus
Probab=99.73 E-value=7.5e-18 Score=137.82 Aligned_cols=80 Identities=31% Similarity=0.476 Sum_probs=74.3
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCC-ccceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAP-IIGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~-~~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|++||++|.++++||++++|. +..++.+|+.++||++|+|+|++|++|++| .++|.+++|+.++||.||+||.|++
T Consensus 312 ~Ll~~Pev~~K~qeEId~vvG~--~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~v 389 (489)
T KOG0156|consen 312 ELLNNPEVQKKLQEEIDEVVGK--GRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLV 389 (489)
T ss_pred HHHhCHHHHHHHHHHHHHHhCC--CCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEE
Confidence 4789999999999999999995 445999999999999999999999999999 5899999999999999999999999
Q ss_pred cCC
Q psy7704 80 KKK 82 (124)
Q Consensus 80 ~~~ 82 (124)
++.
T Consensus 390 n~~ 392 (489)
T KOG0156|consen 390 NLW 392 (489)
T ss_pred eeh
Confidence 763
No 2
>PLN02971 tryptophan N-hydroxylase
Probab=99.70 E-value=3.9e-17 Score=134.33 Aligned_cols=79 Identities=25% Similarity=0.421 Sum_probs=73.8
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCc-cceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~-~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++||++++|. +..++++++.+|||+++|+.|++|++|++|. ++|.+.+|++++||.||+||.|++
T Consensus 353 ~La~~Pevq~kl~~EI~~v~g~--~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~ 430 (543)
T PLN02971 353 EMINKPEILHKAMEEIDRVVGK--ERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLL 430 (543)
T ss_pred HHHhCHHHHHHHHHHHHHHhCC--CCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEE
Confidence 4789999999999999999985 5678999999999999999999999999995 789999999999999999999999
Q ss_pred cC
Q psy7704 80 KK 81 (124)
Q Consensus 80 ~~ 81 (124)
++
T Consensus 431 ~~ 432 (543)
T PLN02971 431 SR 432 (543)
T ss_pred Cc
Confidence 76
No 3
>PLN02500 cytochrome P450 90B1
Probab=99.68 E-value=1e-16 Score=129.87 Aligned_cols=82 Identities=24% Similarity=0.335 Sum_probs=73.0
Q ss_pred CcccCHHHHHHHHHHHHHhhCC---CCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEcCeEeCCCCEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGD---DPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRKE 77 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~---~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g~~IPkGt~V 77 (124)
+|+.||++|+++++|++++++. .+...++++++.++||+++|+.|++|++|++|.++|.+.+|++++||.||+||.|
T Consensus 305 ~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V 384 (490)
T PLN02500 305 FLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKV 384 (490)
T ss_pred HHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEE
Confidence 4789999999999999998742 1234579999999999999999999999999988899999999999999999999
Q ss_pred EEcCC
Q psy7704 78 NKKKK 82 (124)
Q Consensus 78 ~~~~~ 82 (124)
++++.
T Consensus 385 ~~~~~ 389 (490)
T PLN02500 385 LPVIA 389 (490)
T ss_pred Eechh
Confidence 98764
No 4
>PLN02290 cytokinin trans-hydroxylase
Probab=99.68 E-value=1.1e-16 Score=130.29 Aligned_cols=79 Identities=34% Similarity=0.521 Sum_probs=73.3
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEcCeEeCCCCEEEEc
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRKENKK 80 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g~~IPkGt~V~~~ 80 (124)
+|+.||++|+++++|+++++|. ..++++++.++||+++|+.|++|++|+++.++|.+.+|++++||.||+||.|+++
T Consensus 342 ~L~~~P~vq~kl~~Ei~~v~~~---~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~ 418 (516)
T PLN02290 342 LLASNPTWQDKVRAEVAEVCGG---ETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIP 418 (516)
T ss_pred HHhcCHHHHHHHHHHHHHHhCC---CCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEec
Confidence 4789999999999999999984 3789999999999999999999999999988999999999999999999999987
Q ss_pred CC
Q psy7704 81 KK 82 (124)
Q Consensus 81 ~~ 82 (124)
..
T Consensus 419 ~~ 420 (516)
T PLN02290 419 VL 420 (516)
T ss_pred HH
Confidence 53
No 5
>PLN02183 ferulate 5-hydroxylase
Probab=99.67 E-value=1.5e-16 Score=129.91 Aligned_cols=80 Identities=24% Similarity=0.327 Sum_probs=73.5
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEcCeEeCCCCEEEEc
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRKENKK 80 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g~~IPkGt~V~~~ 80 (124)
+|+.||++|+++++|+++++|. ...++++++.++||+++|+.|++|++|++|...|.+.+|++++||.||+||.|+++
T Consensus 330 ~La~~Pevq~kl~~Ei~~v~~~--~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~ 407 (516)
T PLN02183 330 ELMKSPEDLKRVQQELADVVGL--NRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMIN 407 (516)
T ss_pred HHHhCHHHHHHHHHHHHHHcCC--CCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEe
Confidence 3789999999999999999984 45689999999999999999999999999977799999999999999999999997
Q ss_pred CC
Q psy7704 81 KK 82 (124)
Q Consensus 81 ~~ 82 (124)
+.
T Consensus 408 ~~ 409 (516)
T PLN02183 408 AW 409 (516)
T ss_pred hh
Confidence 53
No 6
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.67 E-value=8.2e-17 Score=125.19 Aligned_cols=79 Identities=38% Similarity=0.570 Sum_probs=73.4
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCC-ccceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAP-IIGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~-~~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++||++++++ +..++++++.++||+++|+.|++|++|+++ .++|.+.+|++++||.||+||.|++
T Consensus 288 ~L~~~P~~~~kl~~Ei~~~~~~--~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~ 365 (463)
T PF00067_consen 288 ELAKNPEVQEKLREEIDSVLGD--GREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIV 365 (463)
T ss_dssp HHHHSHHHHHHHHHHHHHHTTT--SSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEE
T ss_pred cccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3788999999999999999974 557889999999999999999999999999 7899999999999999999999998
Q ss_pred cC
Q psy7704 80 KK 81 (124)
Q Consensus 80 ~~ 81 (124)
++
T Consensus 366 ~~ 367 (463)
T PF00067_consen 366 SI 367 (463)
T ss_dssp EH
T ss_pred cc
Confidence 74
No 7
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.66 E-value=1.8e-16 Score=128.60 Aligned_cols=80 Identities=33% Similarity=0.391 Sum_probs=72.9
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCc-cceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~-~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++||+++++. +..++++++.++||++||+.|++|++|++|. ++|.+.+|++++||.||+||.|++
T Consensus 319 ~L~~~P~vq~kl~~Ei~~v~~~--~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~ 396 (503)
T PLN02394 319 ELVNHPEIQKKLRDELDTVLGP--GNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILV 396 (503)
T ss_pred HHHcCHHHHHHHHHHHHHHhCC--CCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEE
Confidence 4789999999999999999985 4567899999999999999999999999995 578889999999999999999999
Q ss_pred cCC
Q psy7704 80 KKK 82 (124)
Q Consensus 80 ~~~ 82 (124)
++.
T Consensus 397 ~~~ 399 (503)
T PLN02394 397 NAW 399 (503)
T ss_pred chH
Confidence 864
No 8
>KOG0158|consensus
Probab=99.65 E-value=2.9e-16 Score=128.49 Aligned_cols=80 Identities=38% Similarity=0.577 Sum_probs=73.7
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEc-CeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQAD-KYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~-g~~IPkGt~V~~ 79 (124)
+||.||++|+++++||++++.. ...+++|.+..|+|+++||.|+||+||++|.+.|.+++|++++ +|.||+|+.|.+
T Consensus 320 eLA~~PdvQ~kLreEI~~~~~~--~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~I 397 (499)
T KOG0158|consen 320 ELAKNPDVQDKLREEIDEVLEE--KEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMI 397 (499)
T ss_pred HHhcChHHHHHHHHHHHHHhcc--cCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEe
Confidence 4899999999999999999774 2229999999999999999999999999999999999999999 999999999999
Q ss_pred cCC
Q psy7704 80 KKK 82 (124)
Q Consensus 80 ~~~ 82 (124)
++.
T Consensus 398 p~~ 400 (499)
T KOG0158|consen 398 PTY 400 (499)
T ss_pred ecc
Confidence 863
No 9
>PTZ00404 cytochrome P450; Provisional
Probab=99.65 E-value=2.3e-16 Score=127.47 Aligned_cols=80 Identities=26% Similarity=0.335 Sum_probs=73.3
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCc-cceeeccceeE-cCeEeCCCCEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITSEIQA-DKYTIPIGRKEN 78 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~-~~r~~~~d~~i-~g~~IPkGt~V~ 78 (124)
+|+.||++|+++++||++++++ ...++++++.++||+++|++|++|++|++|. ++|.+.+|+++ +||.||+||.|.
T Consensus 309 ~L~~~P~vq~kl~~Ei~~v~~~--~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~ 386 (482)
T PTZ00404 309 MLCNYPEIQEKAYNEIKSTVNG--RNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQIL 386 (482)
T ss_pred HHHcCcHHHHHHHHHHHHHhcC--CCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEE
Confidence 4789999999999999999985 4567889999999999999999999999995 79999999999 999999999999
Q ss_pred EcCC
Q psy7704 79 KKKK 82 (124)
Q Consensus 79 ~~~~ 82 (124)
+++.
T Consensus 387 ~~~~ 390 (482)
T PTZ00404 387 INYY 390 (482)
T ss_pred eeHH
Confidence 9763
No 10
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.64 E-value=4.9e-16 Score=125.98 Aligned_cols=80 Identities=30% Similarity=0.441 Sum_probs=73.2
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCc-cceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~-~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++|+++++|+ ...++++++.++||+++|+.|++|++|+++. ++|.+.+|++++||.||+||.|++
T Consensus 314 ~L~~~P~v~~kl~~Ei~~~~~~--~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~ 391 (499)
T PLN03234 314 YLIKYPEAMKKAQDEVRNVIGD--KGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQV 391 (499)
T ss_pred HHHhCHHHHHHHHHHHHHHhCC--CCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEE
Confidence 4789999999999999999984 5568999999999999999999999999996 589999999999999999999999
Q ss_pred cCC
Q psy7704 80 KKK 82 (124)
Q Consensus 80 ~~~ 82 (124)
++.
T Consensus 392 ~~~ 394 (499)
T PLN03234 392 NAW 394 (499)
T ss_pred ehH
Confidence 863
No 11
>PLN02774 brassinosteroid-6-oxidase
Probab=99.64 E-value=6.1e-16 Score=124.73 Aligned_cols=81 Identities=26% Similarity=0.333 Sum_probs=72.9
Q ss_pred CcccCHHHHHHHHHHHHHhhCCC-CCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDD-PETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~-~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++|++++++.. +...++++++.++||+++|+.|++|++|+++.++|.+.+|++++||.||+|+.|++
T Consensus 290 ~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~ 369 (463)
T PLN02774 290 YLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYV 369 (463)
T ss_pred HHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEE
Confidence 37899999999999999998731 23567899999999999999999999999997789999999999999999999999
Q ss_pred cC
Q psy7704 80 KK 81 (124)
Q Consensus 80 ~~ 81 (124)
++
T Consensus 370 ~~ 371 (463)
T PLN02774 370 YT 371 (463)
T ss_pred eh
Confidence 75
No 12
>PLN02966 cytochrome P450 83A1
Probab=99.64 E-value=5.4e-16 Score=126.14 Aligned_cols=82 Identities=26% Similarity=0.422 Sum_probs=73.4
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCc-cceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~-~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++||+++++..+...++++++.++||+++|+.|++|++|++|. ++|.+.+|++++||.||+||.|++
T Consensus 315 ~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~ 394 (502)
T PLN02966 315 YLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNV 394 (502)
T ss_pred HHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEE
Confidence 3788999999999999999984223467899999999999999999999999995 689999999999999999999998
Q ss_pred cCC
Q psy7704 80 KKK 82 (124)
Q Consensus 80 ~~~ 82 (124)
++.
T Consensus 395 ~~~ 397 (502)
T PLN02966 395 NAW 397 (502)
T ss_pred ecc
Confidence 764
No 13
>PLN00168 Cytochrome P450; Provisional
Probab=99.63 E-value=6.7e-16 Score=126.14 Aligned_cols=81 Identities=26% Similarity=0.383 Sum_probs=73.3
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCc-cceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~-~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++||+++++. +...++++++.++||+++|+.|++|++|+++. ++|.+.+|++++||.||+||.|++
T Consensus 332 ~L~~~P~~q~kl~~Ei~~v~~~-~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~ 410 (519)
T PLN00168 332 ELVKNPSIQSKLHDEIKAKTGD-DQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNF 410 (519)
T ss_pred HHHhCHHHHHHHHHHHHHHhCC-CCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEE
Confidence 4789999999999999999983 34567999999999999999999999999985 689999999999999999999999
Q ss_pred cCC
Q psy7704 80 KKK 82 (124)
Q Consensus 80 ~~~ 82 (124)
++.
T Consensus 411 ~~~ 413 (519)
T PLN00168 411 MVA 413 (519)
T ss_pred ChH
Confidence 763
No 14
>KOG0159|consensus
Probab=99.62 E-value=5.9e-16 Score=126.07 Aligned_cols=81 Identities=32% Similarity=0.454 Sum_probs=74.1
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEcCeEeCCCCEEEEc
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRKENKK 80 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g~~IPkGt~V~~~ 80 (124)
.|+.||++|+++++|+.+++.. +...++.+++.++||+.|||.|++||||++|+..|.+..|.+++||.||+||.|.++
T Consensus 342 ~LarnP~~Q~~L~~Ei~~~~p~-~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~ 420 (519)
T KOG0159|consen 342 ELARNPEVQQRLREEILAVLPS-GNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLF 420 (519)
T ss_pred HHhcChHHHHHHHHHHHhhCCC-cccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEe
Confidence 3789999999999999999884 457788899999999999999999999999999999999999999999999988665
Q ss_pred CC
Q psy7704 81 KK 82 (124)
Q Consensus 81 ~~ 82 (124)
..
T Consensus 421 ~~ 422 (519)
T KOG0159|consen 421 LY 422 (519)
T ss_pred eh
Confidence 43
No 15
>PLN02738 carotene beta-ring hydroxylase
Probab=99.62 E-value=9.4e-16 Score=128.74 Aligned_cols=79 Identities=30% Similarity=0.502 Sum_probs=72.9
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEcCeEeCCCCEEEEc
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRKENKK 80 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g~~IPkGt~V~~~ 80 (124)
+|+.||++|+++++|++++++ +..++++++++|||+++||.|++|+||+++.++|.+.+|++++||.||+||.|+++
T Consensus 417 ~L~~~Pevq~kLreEl~~v~~---~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s 493 (633)
T PLN02738 417 LLSKEPSVVAKLQEEVDSVLG---DRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFIS 493 (633)
T ss_pred HHHhCHHHHHHHHHHHHHhcC---CCCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEec
Confidence 478999999999999999998 35689999999999999999999999999987899999999999999999999987
Q ss_pred CC
Q psy7704 81 KK 82 (124)
Q Consensus 81 ~~ 82 (124)
+.
T Consensus 494 ~~ 495 (633)
T PLN02738 494 VW 495 (633)
T ss_pred HH
Confidence 53
No 16
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.62 E-value=1.2e-15 Score=124.46 Aligned_cols=80 Identities=23% Similarity=0.351 Sum_probs=73.4
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCc-cceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~-~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++|++++++. ...++++++.++||+++|+.|++|++|+++. ++|.+.+|++++||.||+||.|++
T Consensus 315 ~L~~~P~~~~kl~~Ei~~~~~~--~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~ 392 (504)
T PLN00110 315 EMLKNPSILKRAHEEMDQVIGR--NRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSV 392 (504)
T ss_pred HHHhCHHHHHHHHHHHHHHhCC--CCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEE
Confidence 3788999999999999999985 4568999999999999999999999999995 799999999999999999999998
Q ss_pred cCC
Q psy7704 80 KKK 82 (124)
Q Consensus 80 ~~~ 82 (124)
++.
T Consensus 393 ~~~ 395 (504)
T PLN00110 393 NIW 395 (504)
T ss_pred eHH
Confidence 753
No 17
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.62 E-value=1.1e-15 Score=124.50 Aligned_cols=79 Identities=22% Similarity=0.394 Sum_probs=73.0
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCc-cceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~-~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++||++++|. ...++++++.++||+++++.|++|++|+++. ++|.+.+|+.++||.||+||.|++
T Consensus 322 ~L~~~P~vq~kl~~Ei~~~~~~--~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~ 399 (514)
T PLN03112 322 EVIKNPRVLRKIQEELDSVVGR--NRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFI 399 (514)
T ss_pred HHHhChHHHHHHHHHHHHhcCC--CCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEE
Confidence 4789999999999999999985 4568999999999999999999999999995 689999999999999999999998
Q ss_pred cC
Q psy7704 80 KK 81 (124)
Q Consensus 80 ~~ 81 (124)
++
T Consensus 400 ~~ 401 (514)
T PLN03112 400 NT 401 (514)
T ss_pred eh
Confidence 76
No 18
>PLN03018 homomethionine N-hydroxylase
Probab=99.61 E-value=1.7e-15 Score=124.72 Aligned_cols=80 Identities=21% Similarity=0.340 Sum_probs=73.0
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCc-cceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~-~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++||+++++. ...++++++.++||+++|+.|++|++|++|. .+|.+.+|++++||.||+|+.|++
T Consensus 340 ~L~~~P~~q~kl~~Ei~~v~~~--~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~ 417 (534)
T PLN03018 340 EMLKNPEILRKALKELDEVVGK--DRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHV 417 (534)
T ss_pred HHHcCHHHHHHHHHHHHHHhCC--CCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEE
Confidence 4789999999999999999984 5678899999999999999999999999996 478899999999999999999999
Q ss_pred cCC
Q psy7704 80 KKK 82 (124)
Q Consensus 80 ~~~ 82 (124)
+..
T Consensus 418 ~~~ 420 (534)
T PLN03018 418 CRP 420 (534)
T ss_pred ChH
Confidence 763
No 19
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.61 E-value=1.8e-15 Score=123.55 Aligned_cols=80 Identities=30% Similarity=0.473 Sum_probs=73.6
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCc-cceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~-~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++||+++++. ...++++++.++||+++|+.|++|++|+++. ++|.+.+|++++||.||+||.|++
T Consensus 323 ~L~~~P~~~~kl~~Ei~~~~~~--~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~ 400 (517)
T PLN02687 323 ELIRHPDILKKAQEELDAVVGR--DRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLV 400 (517)
T ss_pred HHHhCHHHHHHHHHHHHHHcCC--CCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEE
Confidence 3789999999999999999985 5678999999999999999999999999995 799999999999999999999999
Q ss_pred cCC
Q psy7704 80 KKK 82 (124)
Q Consensus 80 ~~~ 82 (124)
++.
T Consensus 401 ~~~ 403 (517)
T PLN02687 401 NVW 403 (517)
T ss_pred ecH
Confidence 763
No 20
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.61 E-value=1.9e-15 Score=123.61 Aligned_cols=81 Identities=19% Similarity=0.428 Sum_probs=72.3
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeE-cCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQA-DKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i-~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++|+++++|. +...++++++.++||+++|+.|++|++|++|...|.+..|.++ +||.||+||.|++
T Consensus 319 ~L~~~P~v~~kl~~Ei~~~~~~-~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~ 397 (502)
T PLN02426 319 LLSKHPEVASAIREEADRVMGP-NQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTY 397 (502)
T ss_pred HHhcCHHHHHHHHHHHHHhhCC-CCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEE
Confidence 3789999999999999999884 2346899999999999999999999999999777888888887 8999999999998
Q ss_pred cCC
Q psy7704 80 KKK 82 (124)
Q Consensus 80 ~~~ 82 (124)
++.
T Consensus 398 ~~~ 400 (502)
T PLN02426 398 HPY 400 (502)
T ss_pred chH
Confidence 763
No 21
>PLN02655 ent-kaurene oxidase
Probab=99.60 E-value=1.8e-15 Score=122.07 Aligned_cols=78 Identities=33% Similarity=0.504 Sum_probs=71.6
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCc-cceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~-~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++||+.++|. . .++++++.++||+++++.|++|++|+++. ++|.+.+|++++||.||+||.|++
T Consensus 288 ~l~~~p~~~~~l~~Ei~~~~~~--~-~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~ 364 (466)
T PLN02655 288 ELAKNPDKQERLYREIREVCGD--E-RVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAI 364 (466)
T ss_pred HHHcCHHHHHHHHHHHHHHhCC--C-CCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEe
Confidence 4789999999999999999984 3 38999999999999999999999999995 589999999999999999999998
Q ss_pred cC
Q psy7704 80 KK 81 (124)
Q Consensus 80 ~~ 81 (124)
+.
T Consensus 365 ~~ 366 (466)
T PLN02655 365 NI 366 (466)
T ss_pred cH
Confidence 75
No 22
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.60 E-value=3.1e-15 Score=120.19 Aligned_cols=82 Identities=21% Similarity=0.201 Sum_probs=72.2
Q ss_pred CcccCHHHHHHHHHHHHHhhCC--CCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEcCeEeCCCCEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGD--DPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRKEN 78 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~--~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g~~IPkGt~V~ 78 (124)
+|+.||++|+++++|++++++. ..+..++++++.++||+++||.|++|++|+++.++|.+.+|++++||.||+|+.|+
T Consensus 277 ~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~ 356 (452)
T PLN03141 277 FLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVL 356 (452)
T ss_pred HHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEE
Confidence 4789999999999999988642 12445789999999999999999999999998888999999999999999999999
Q ss_pred EcCC
Q psy7704 79 KKKK 82 (124)
Q Consensus 79 ~~~~ 82 (124)
++..
T Consensus 357 ~~~~ 360 (452)
T PLN03141 357 AYFR 360 (452)
T ss_pred EehH
Confidence 8753
No 23
>KOG0157|consensus
Probab=99.59 E-value=3e-15 Score=122.42 Aligned_cols=82 Identities=32% Similarity=0.609 Sum_probs=69.4
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEc-CeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQAD-KYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~-g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++|+.+++|.. ...+.......|+|+.+|+.|++|+||++|.+.|.+.+|+.++ ||.||+|+.|++
T Consensus 317 ~La~hP~vq~k~~eEi~~i~~~~-~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i 395 (497)
T KOG0157|consen 317 LLAKHPEVQEKLREEVDEILGNR-DDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLI 395 (497)
T ss_pred HHhcCHHHHHHHHHHHHHHhCCC-CCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEE
Confidence 47899999999999999999842 2222333333699999999999999999999999999999995 899999999999
Q ss_pred cCCc
Q psy7704 80 KKKQ 83 (124)
Q Consensus 80 ~~~~ 83 (124)
++..
T Consensus 396 ~~~~ 399 (497)
T KOG0157|consen 396 SIYA 399 (497)
T ss_pred ehHH
Confidence 8763
No 24
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.58 E-value=3.2e-15 Score=121.90 Aligned_cols=81 Identities=28% Similarity=0.442 Sum_probs=69.1
Q ss_pred CcccCHHHHHHHHHHHHHhhCCC------------------CCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeecc
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDD------------------PETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITS 62 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~------------------~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~ 62 (124)
+|+.||++|+++++|++++++.. .+..++++++.++||++||+.|++|++|++|..+|.+..
T Consensus 318 ~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~ 397 (516)
T PLN03195 318 MIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILE 397 (516)
T ss_pred HHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhcc
Confidence 47899999999999999987521 023578999999999999999999999999977777777
Q ss_pred ceeE-cCeEeCCCCEEEEcC
Q psy7704 63 EIQA-DKYTIPIGRKENKKK 81 (124)
Q Consensus 63 d~~i-~g~~IPkGt~V~~~~ 81 (124)
|.++ +||.||+||.|++++
T Consensus 398 d~~~~~G~~IpkGt~V~~~~ 417 (516)
T PLN03195 398 DDVLPDGTKVKAGGMVTYVP 417 (516)
T ss_pred CcCcCCCcEECCCCEEEEeh
Confidence 6665 899999999998875
No 25
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.57 E-value=7.2e-15 Score=118.62 Aligned_cols=81 Identities=26% Similarity=0.363 Sum_probs=72.6
Q ss_pred CcccCHHHHHHHHHHHHHhhCCC-CCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDD-PETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~-~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++|++++++.. ....++++++..+||+++++.|++|++|+++...|.+.+|+.++||.||+|+.|++
T Consensus 290 ~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~ 369 (463)
T PLN02196 290 YLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLP 369 (463)
T ss_pred HHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEe
Confidence 36889999999999999998741 23568899999999999999999999999997779999999999999999999998
Q ss_pred cC
Q psy7704 80 KK 81 (124)
Q Consensus 80 ~~ 81 (124)
++
T Consensus 370 ~~ 371 (463)
T PLN02196 370 LF 371 (463)
T ss_pred eH
Confidence 75
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=99.54 E-value=1.4e-14 Score=117.68 Aligned_cols=79 Identities=32% Similarity=0.574 Sum_probs=69.4
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCc-cceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPI-IGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~-~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++|++.+++. ..++++++.+|||++||+.|++|++|+++. ++|.+..|+.++||.||+|+.|++
T Consensus 304 ~L~~~p~~~~kl~~Ei~~~~~~---~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~ 380 (489)
T PLN02936 304 LLSKNPEALRKAQEELDRVLQG---RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMI 380 (489)
T ss_pred HHhcCHHHHHHHHHHHHHHhcC---CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEe
Confidence 4789999999999999999983 457899999999999999999999999984 556667777789999999999999
Q ss_pred cCC
Q psy7704 80 KKK 82 (124)
Q Consensus 80 ~~~ 82 (124)
+..
T Consensus 381 ~~~ 383 (489)
T PLN02936 381 SVY 383 (489)
T ss_pred cHH
Confidence 764
No 27
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.54 E-value=1.1e-14 Score=118.93 Aligned_cols=74 Identities=19% Similarity=0.285 Sum_probs=64.9
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeE-cCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQA-DKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i-~g~~IPkGt~V~~ 79 (124)
+|+.||++|+++++||++++ +++++.++||+++++.|++|+||++|.+.|.+..|.++ +||.||+||.|++
T Consensus 327 ~La~~Pevq~kl~~Ei~~v~--------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i 398 (500)
T PLN02169 327 LLSKHPQVMAKIRHEINTKF--------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVI 398 (500)
T ss_pred HHHCCHHHHHHHHHHHHhhC--------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEE
Confidence 47899999999999998764 36889999999999999999999999877777666555 8999999999999
Q ss_pred cCC
Q psy7704 80 KKK 82 (124)
Q Consensus 80 ~~~ 82 (124)
++.
T Consensus 399 ~~~ 401 (500)
T PLN02169 399 CIY 401 (500)
T ss_pred cHH
Confidence 864
No 28
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.54 E-value=1.9e-14 Score=116.01 Aligned_cols=81 Identities=27% Similarity=0.403 Sum_probs=71.4
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCC--CCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEcCeEeCCCCEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDP--ETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRKEN 78 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~--~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g~~IPkGt~V~ 78 (124)
+|+.||++|+++++|++++++... ...++++++.++||+.+++.|++|++|+++..+|.+..|++++||.||+|+.|+
T Consensus 313 ~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~ 392 (490)
T PLN02302 313 FLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVL 392 (490)
T ss_pred HHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEE
Confidence 367999999999999999987311 223789999999999999999999999999878999999999999999999998
Q ss_pred EcC
Q psy7704 79 KKK 81 (124)
Q Consensus 79 ~~~ 81 (124)
++.
T Consensus 393 ~~~ 395 (490)
T PLN02302 393 AWF 395 (490)
T ss_pred eeH
Confidence 864
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.52 E-value=4e-14 Score=115.02 Aligned_cols=81 Identities=21% Similarity=0.230 Sum_probs=71.7
Q ss_pred CcccCHHHHHHHHHHHHHhhCCC-CCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEcCeEeCCCCEEEE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDD-PETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~-~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
+|+.||++++++++|++++.+.. +...++++++.++||+++++.|++|++|+++.++|.+.+|++++||.||+|+.|++
T Consensus 293 ~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~ 372 (472)
T PLN02987 293 FLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFA 372 (472)
T ss_pred HHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEE
Confidence 36789999999999999987631 23457899999999999999999999999987889999999999999999999998
Q ss_pred cC
Q psy7704 80 KK 81 (124)
Q Consensus 80 ~~ 81 (124)
++
T Consensus 373 ~~ 374 (472)
T PLN02987 373 SF 374 (472)
T ss_pred eh
Confidence 75
No 30
>PLN02648 allene oxide synthase
Probab=99.45 E-value=1.9e-13 Score=111.66 Aligned_cols=80 Identities=15% Similarity=0.243 Sum_probs=70.7
Q ss_pred CcccCHH-HHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEc----CeEeCCCC
Q psy7704 1 MLALHPK-IQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQAD----KYTIPIGR 75 (124)
Q Consensus 1 ~La~~P~-iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~----g~~IPkGt 75 (124)
+|+.||+ +++++++|++.+++. ....++++++.+|||+++|+.|++|++|+++.+.|.+.+|++++ ||.||+|+
T Consensus 298 ~L~~~p~~v~~klr~Ei~~~~~~-~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~ 376 (480)
T PLN02648 298 WVGRAGEELQARLAEEVRSAVKA-GGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGE 376 (480)
T ss_pred HHHcCCHHHHHHHHHHHHHHhcc-CCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCC
Confidence 3678985 999999999999863 24568999999999999999999999999998788899999996 79999999
Q ss_pred EEEEcC
Q psy7704 76 KENKKK 81 (124)
Q Consensus 76 ~V~~~~ 81 (124)
.|++++
T Consensus 377 ~V~~~~ 382 (480)
T PLN02648 377 MLFGYQ 382 (480)
T ss_pred EEEECh
Confidence 998764
No 31
>KOG0684|consensus
Probab=99.36 E-value=1.2e-12 Score=105.45 Aligned_cols=81 Identities=37% Similarity=0.532 Sum_probs=74.2
Q ss_pred CcccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEcC----eEeCCCCE
Q psy7704 1 MLALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADK----YTIPIGRK 76 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g----~~IPkGt~ 76 (124)
+|++|||++.-+++|+..++|. ....++++.+..+|.+++||.|++|++||.+++.|.+.+|+++.+ |.||+|..
T Consensus 299 yLl~~Pe~~~a~~eE~k~vlG~-~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~ 377 (486)
T KOG0684|consen 299 YLLRHPEAQKAVREEQKRVLGE-KKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDI 377 (486)
T ss_pred HHhhCHHHHHHHHHHHHHHhhc-cCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCE
Confidence 5889999999999999999994 455689999999999999999999999999988999999999976 99999999
Q ss_pred EEEcCC
Q psy7704 77 ENKKKK 82 (124)
Q Consensus 77 V~~~~~ 82 (124)
|.+++-
T Consensus 378 valsP~ 383 (486)
T KOG0684|consen 378 VALSPF 383 (486)
T ss_pred EEeccc
Confidence 998763
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.81 E-value=5.1e-09 Score=83.96 Aligned_cols=62 Identities=34% Similarity=0.499 Sum_probs=53.4
Q ss_pred cccCHHHHHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEcCeEeCCCCEEEEcC
Q psy7704 2 LALHPKIQQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRKENKKK 81 (124)
Q Consensus 2 La~~P~iq~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g~~IPkGt~V~~~~ 81 (124)
|+.||++++++++|.+. ||+.+++.|++|++|+++.+.|.+.+|++++|+.||+|+.|++++
T Consensus 263 L~~~P~~~~~l~~e~~~------------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~~V~~~~ 324 (411)
T COG2124 263 LLRHPDQLAKLRAEPDR------------------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGTVVLLSI 324 (411)
T ss_pred HHHCchHHHHHHhCcch------------------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCCCEEEecH
Confidence 56777777777765421 789999999999999999988999999999999999999999865
No 33
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=78.41 E-value=0.98 Score=33.40 Aligned_cols=42 Identities=17% Similarity=0.192 Sum_probs=30.4
Q ss_pred hhHHHHHHHHhccCCCCCccceeeccceeEcCeEeCCCCEEEE
Q psy7704 37 HLLTRVIKETLRLYPAAPIIGRHITSEIQADKYTIPIGRKENK 79 (124)
Q Consensus 37 pyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~g~~IPkGt~V~~ 79 (124)
....|||+|...+. .+..+.-.+.+|+.++|..||+||.|+-
T Consensus 53 n~I~A~V~~~qtv~-~Gs~vrlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 53 NTIRAVVDGTQTVV-DGSRVRLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CeEEEEEecceEEe-CCCEEEEEEcCceEECCEEeCCCCEEEE
Confidence 44567777777652 2333444678999999999999998875
No 34
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=61.10 E-value=3.8 Score=33.50 Aligned_cols=23 Identities=26% Similarity=0.293 Sum_probs=18.6
Q ss_pred eeccceeEcCeEeCCCCEEEEcC
Q psy7704 59 HITSEIQADKYTIPIGRKENKKK 81 (124)
Q Consensus 59 ~~~~d~~i~g~~IPkGt~V~~~~ 81 (124)
.+.+|+.++|..||+||.|+-..
T Consensus 277 RLle~~~v~~~~ipkgt~l~g~~ 299 (410)
T TIGR03779 277 RLLEPIQAGDLVIPKGTVLYGTA 299 (410)
T ss_pred EEcCceeeCCEEecCCCEEEEEe
Confidence 45678888999999999987653
No 35
>PF07971 Glyco_hydro_92: Glycosyl hydrolase family 92; InterPro: IPR012939 This domain occurs within alpha-1,2-mannosidases, which remove alpha-1,2-linked mannose residues from Man(9)(GlcNAc)(2) by hydrolysis. They are critical for the maturation of N-linked oligosaccharides and ER-associated degradation [].; PDB: 2WW2_C 2WVY_B 2WVZ_B 2WW0_H 2WZS_D 2WVX_B 2WW1_D 2WW3_C.
Probab=48.47 E-value=42 Score=28.20 Aligned_cols=78 Identities=17% Similarity=0.222 Sum_probs=41.9
Q ss_pred cCHHH-HHHHHHHHHHhhCCCCCCCCCHHHhhhchhHHHHHHHHhccCCCCCccceeeccceeEc--CeEeCCCCEEEEc
Q psy7704 4 LHPKI-QQEVYDEIVQVLGDDPETVPTYDQIQELHLLTRVIKETLRLYPAAPIIGRHITSEIQAD--KYTIPIGRKENKK 80 (124)
Q Consensus 4 ~~P~i-q~rl~eEi~~vlg~~~~~~~t~e~~~~lpyl~a~v~E~lRl~p~~~~~~r~~~~d~~i~--g~~IPkGt~V~~~ 80 (124)
..|.. |..+++-+.+.++..++..+..+|...|. ...|-.+|-|||+.|..+..+...-.|. .+.++.|..+.|.
T Consensus 380 g~P~kTq~~vr~i~~~~y~~~p~G~pGndD~G~MS--aWyV~salG~YPv~pg~~~y~igsP~F~~~~i~l~~g~~~~I~ 457 (502)
T PF07971_consen 380 GQPWKTQEWVRRILDELYSNTPDGLPGNDDCGQMS--AWYVFSALGFYPVNPGSPEYVIGSPLFDKVTIHLGNGKTFTIE 457 (502)
T ss_dssp T-HHHHHHHHHHHHHHSB-SSTT-CSSTTTTTCCH--HHHHHHHHTEE-SSTTSSEEEE---SSSEEEEE-CCC-EEEEE
T ss_pred CChHHHHHHHHHHHHHHhCCccCCCCCCcccchHH--HHHHHHHcCCCCCCCCCceEEEcCCccCeEEEEcCCCCEEEEE
Confidence 34554 44555555667775557778888888875 3478889999999775433332111122 1345677666665
Q ss_pred CCc
Q psy7704 81 KKQ 83 (124)
Q Consensus 81 ~~~ 83 (124)
+.|
T Consensus 458 a~n 460 (502)
T PF07971_consen 458 AKN 460 (502)
T ss_dssp -TT
T ss_pred ecC
Confidence 544
No 36
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=29.48 E-value=47 Score=26.56 Aligned_cols=52 Identities=15% Similarity=0.309 Sum_probs=35.5
Q ss_pred CcccCHHHH-HHHHHHHHHhhCCCCCCCCCHHHhh----hchh-----H-----HHHHHHHhccCCCC
Q psy7704 1 MLALHPKIQ-QEVYDEIVQVLGDDPETVPTYDQIQ----ELHL-----L-----TRVIKETLRLYPAA 53 (124)
Q Consensus 1 ~La~~P~iq-~rl~eEi~~vlg~~~~~~~t~e~~~----~lpy-----l-----~a~v~E~lRl~p~~ 53 (124)
+++.||+.. +++.+|+..++. +.+.+|-|+.+. +|.| + ..+|-|.+--||+.
T Consensus 145 FiA~~~erF~~~viAEmrG~~D-e~G~SPFWd~lg~hFF~mdF~eAD~Lsg~~~k~FIaeLMP~~PIY 211 (336)
T TIGR03244 145 FIAQFRERFSKKIIAEMRGVSD-EQGRSPFWNALGRHFFSMDFSQADYLSGIGQKAFIAELMPKFPIY 211 (336)
T ss_pred HHHhhHhhhhhhhhhhhcCccC-CCCCCchHHHhhccccCCCHHHHHHHhccCcchhHHHHCCCCCcc
Confidence 367788765 788999988877 467788888764 3333 2 24677777666753
No 37
>PRK06789 flagellar motor switch protein; Validated
Probab=28.19 E-value=88 Score=19.39 Aligned_cols=40 Identities=13% Similarity=0.165 Sum_probs=27.6
Q ss_pred HHHHHhccCCCCC-ccceeeccc--eeEcCeEeCCCCEEEEcC
Q psy7704 42 VIKETLRLYPAAP-IIGRHITSE--IQADKYTIPIGRKENKKK 81 (124)
Q Consensus 42 ~v~E~lRl~p~~~-~~~r~~~~d--~~i~g~~IPkGt~V~~~~ 81 (124)
.+.|.+.+.+-.. .+-+.+.++ +.++|..|..|..|.++-
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~~ 63 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKNG 63 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence 3567777766554 356666554 445899999999988763
No 38
>PF11012 DUF2850: Protein of unknown function (DUF2850); InterPro: IPR021271 This family of proteins with unknown function appear to be restricted to Vibrionaceae.
Probab=24.52 E-value=65 Score=20.27 Aligned_cols=46 Identities=17% Similarity=0.244 Sum_probs=31.3
Q ss_pred HHHhccCCCCC-ccceeeccceeEcC----eEeCCCCEEEEcCCcchHHHH
Q psy7704 44 KETLRLYPAAP-IIGRHITSEIQADK----YTIPIGRKENKKKKQKKKQTK 89 (124)
Q Consensus 44 ~E~lRl~p~~~-~~~r~~~~d~~i~g----~~IPkGt~V~~~~~~~~~~~~ 89 (124)
.|.+.|.+.+. ...|.++.++.|+| |.+-.|+.+..-.....++|+
T Consensus 16 ~e~~~l~~~GV~~ngrlV~T~F~fDG~~l~~~~G~~~~~y~~~~~~~s~mk 66 (79)
T PF11012_consen 16 AEEFTLNESGVFRNGRLVATSFEFDGKTLEYRTGSGTYRYQISGENNSEMK 66 (79)
T ss_pred ccEEEECCCcEEECCCEEeeEEEECCCEEEEEECCeEEEEEEcCCCchheE
Confidence 46777777776 46778899999987 444556666666655555554
No 39
>PF11138 DUF2911: Protein of unknown function (DUF2911); InterPro: IPR021314 This bacterial family of proteins has no known function.
Probab=23.90 E-value=90 Score=21.88 Aligned_cols=22 Identities=5% Similarity=0.063 Sum_probs=17.0
Q ss_pred eeccceeEcCeEeCCCCEEEEc
Q psy7704 59 HITSEIQADKYTIPIGRKENKK 80 (124)
Q Consensus 59 ~~~~d~~i~g~~IPkGt~V~~~ 80 (124)
.+..|+.|+|-.||+|+.-++.
T Consensus 51 ~f~~dv~igGk~l~AG~Ysl~t 72 (145)
T PF11138_consen 51 TFSKDVTIGGKKLKAGTYSLFT 72 (145)
T ss_pred EECCCeEECCEEcCCeeEEEEE
Confidence 4578999999999998855543
No 40
>KOG4616|consensus
Probab=23.44 E-value=2.4e+02 Score=19.01 Aligned_cols=70 Identities=14% Similarity=0.247 Sum_probs=34.5
Q ss_pred cccCHHHHHHHHH----HHHHhhCCCCCCCCCHHHhhhchhHHHHH----HHHhccCCCCCccceeeccceeEcCeEeCC
Q psy7704 2 LALHPKIQQEVYD----EIVQVLGDDPETVPTYDQIQELHLLTRVI----KETLRLYPAAPIIGRHITSEIQADKYTIPI 73 (124)
Q Consensus 2 La~~P~iq~rl~e----Ei~~vlg~~~~~~~t~e~~~~lpyl~a~v----~E~lRl~p~~~~~~r~~~~d~~i~g~~IPk 73 (124)
|-.||.++.++.. ..+.++-.+.+..++++...+ .+..++. ..-+++||.. ++-|-
T Consensus 3 l~eh~nfhaklank~lk~hh~~lvkekgrkisfeernn-a~raalgki~rrdy~h~y~~k---------------fi~pd 66 (137)
T KOG4616|consen 3 LKEHPNFHAKLANKALKQHHCILVKEKGRKISFEERNN-AARAALGKIHRRDYCHLYPTK---------------FIQPD 66 (137)
T ss_pred hhhcchHHHHHHHHHHHHHhhhhhhhcccccchhhhhh-HHHHHHHHHHHHhHHhhccee---------------EEcCC
Confidence 4567776666554 333333223355666665543 2222222 1223444433 34577
Q ss_pred CCEEEEcCCcchHH
Q psy7704 74 GRKENKKKKQKKKQ 87 (124)
Q Consensus 74 Gt~V~~~~~~~~~~ 87 (124)
|+.|+++..--.++
T Consensus 67 gstimipaaeprk~ 80 (137)
T KOG4616|consen 67 GSTIMIPAAEPRKI 80 (137)
T ss_pred CCeEeeeccCcHHH
Confidence 77777776554443
No 41
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=20.76 E-value=20 Score=21.20 Aligned_cols=21 Identities=14% Similarity=0.431 Sum_probs=15.8
Q ss_pred CcccCHHHHHHHHHHHHHhhC
Q psy7704 1 MLALHPKIQQEVYDEIVQVLG 21 (124)
Q Consensus 1 ~La~~P~iq~rl~eEi~~vlg 21 (124)
||..||++..++.+.-.+.+|
T Consensus 8 YLv~nPevl~kl~~g~asLIG 28 (57)
T PF05952_consen 8 YLVQNPEVLEKLKEGEASLIG 28 (57)
T ss_pred HHHHChHHHHHHHcCCeeEec
Confidence 578899999999875555555
Done!