Query psy7710
Match_columns 473
No_of_seqs 446 out of 4559
Neff 10.1
Searched_HMMs 29240
Date Fri Aug 16 16:50:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7710.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7710hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dme_A Conserved exported prot 100.0 9.6E-41 3.3E-45 325.4 34.5 345 56-445 3-366 (369)
2 3nyc_A D-arginine dehydrogenas 100.0 1E-39 3.6E-44 319.5 28.9 352 56-458 8-379 (381)
3 1y56_B Sarcosine oxidase; dehy 100.0 2.9E-38 9.8E-43 309.5 31.4 353 56-460 4-371 (382)
4 2gf3_A MSOX, monomeric sarcosi 100.0 4.4E-37 1.5E-41 301.8 32.1 364 57-462 3-382 (389)
5 2gag_B Heterotetrameric sarcos 100.0 5.1E-36 1.7E-40 295.8 32.4 351 55-459 19-390 (405)
6 1ryi_A Glycine oxidase; flavop 100.0 9E-37 3.1E-41 298.8 23.1 346 55-459 15-378 (382)
7 2uzz_A N-methyl-L-tryptophan o 100.0 6.1E-35 2.1E-39 284.8 34.1 353 57-458 2-371 (372)
8 3axb_A Putative oxidoreductase 100.0 6.3E-36 2.2E-40 299.0 27.5 361 56-461 22-444 (448)
9 2oln_A NIKD protein; flavoprot 100.0 5.8E-34 2E-38 280.3 36.7 359 56-459 3-389 (397)
10 3pvc_A TRNA 5-methylaminomethy 100.0 7.2E-35 2.5E-39 305.1 28.5 347 56-459 263-667 (689)
11 3ps9_A TRNA 5-methylaminomethy 100.0 2.5E-34 8.4E-39 300.9 30.5 347 56-459 271-663 (676)
12 1pj5_A N,N-dimethylglycine oxi 100.0 1E-33 3.5E-38 302.6 31.5 372 56-459 3-394 (830)
13 3dje_A Fructosyl amine: oxygen 100.0 3.4E-32 1.2E-36 271.1 28.2 353 56-445 5-384 (438)
14 3g3e_A D-amino-acid oxidase; F 100.0 3E-33 1E-37 270.5 11.0 314 58-445 1-333 (351)
15 2qcu_A Aerobic glycerol-3-phos 100.0 2.2E-30 7.4E-35 261.6 29.0 310 57-413 3-326 (501)
16 2rgh_A Alpha-glycerophosphate 100.0 1E-29 3.4E-34 259.7 33.3 343 56-445 31-411 (571)
17 3c4n_A Uncharacterized protein 100.0 2.3E-31 7.8E-36 262.0 20.1 322 56-445 35-393 (405)
18 1c0p_A D-amino acid oxidase; a 100.0 9E-32 3.1E-36 261.3 16.2 309 56-443 5-355 (363)
19 3da1_A Glycerol-3-phosphate de 100.0 2.5E-29 8.5E-34 256.3 28.5 309 56-407 17-345 (561)
20 3cgv_A Geranylgeranyl reductas 99.6 7.1E-15 2.4E-19 143.9 20.5 159 57-271 4-172 (397)
21 3v76_A Flavoprotein; structura 99.6 1.7E-14 6E-19 141.1 17.3 165 55-271 25-208 (417)
22 2i0z_A NAD(FAD)-utilizing dehy 99.6 1.4E-14 4.8E-19 143.8 14.5 178 54-271 23-212 (447)
23 3oz2_A Digeranylgeranylglycero 99.6 5.2E-14 1.8E-18 137.6 18.0 164 56-270 3-171 (397)
24 3nix_A Flavoprotein/dehydrogen 99.6 2.6E-13 8.8E-18 133.9 20.9 72 199-271 101-176 (421)
25 2gqf_A Hypothetical protein HI 99.5 1.3E-13 4.3E-18 134.6 16.3 163 57-271 4-189 (401)
26 1qo8_A Flavocytochrome C3 fuma 99.5 3E-13 1E-17 138.2 19.7 191 56-266 120-320 (566)
27 3rp8_A Flavoprotein monooxygen 99.5 1.2E-12 4.2E-17 128.4 19.7 69 199-270 122-191 (407)
28 3ihg_A RDME; flavoenzyme, anth 99.5 1.6E-12 5.5E-17 132.2 20.2 71 200-271 116-193 (535)
29 3fmw_A Oxygenase; mithramycin, 99.5 3.8E-13 1.3E-17 137.0 15.1 72 199-271 143-217 (570)
30 3ka7_A Oxidoreductase; structu 99.5 6.6E-13 2.3E-17 131.2 16.2 60 204-264 196-257 (425)
31 1y0p_A Fumarate reductase flav 99.5 2.2E-12 7.6E-17 132.0 20.4 185 56-260 125-317 (571)
32 3nrn_A Uncharacterized protein 99.5 3.4E-13 1.2E-17 133.1 13.5 64 192-260 180-243 (421)
33 4at0_A 3-ketosteroid-delta4-5a 99.5 1.4E-12 4.9E-17 131.5 17.9 201 55-266 39-272 (510)
34 4dgk_A Phytoene dehydrogenase; 99.5 2.5E-12 8.6E-17 129.8 19.5 57 204-260 221-278 (501)
35 3nlc_A Uncharacterized protein 99.5 1.7E-12 5.8E-17 130.5 17.9 173 56-271 106-291 (549)
36 2qa1_A PGAE, polyketide oxygen 99.5 2.7E-12 9.1E-17 129.0 19.3 71 200-271 102-175 (500)
37 3i6d_A Protoporphyrinogen oxid 99.5 6.7E-12 2.3E-16 125.6 22.1 55 204-260 235-289 (470)
38 2bs2_A Quinol-fumarate reducta 99.4 2.1E-12 7.3E-17 133.1 18.3 185 56-261 4-221 (660)
39 2qa2_A CABE, polyketide oxygen 99.4 3.2E-12 1.1E-16 128.4 18.3 71 200-271 103-176 (499)
40 3atr_A Conserved archaeal prot 99.4 1.5E-11 5.1E-16 122.4 22.7 70 200-270 96-171 (453)
41 3i3l_A Alkylhalidase CMLS; fla 99.4 4.5E-12 1.5E-16 129.3 19.0 73 197-270 121-197 (591)
42 2x3n_A Probable FAD-dependent 99.4 4E-12 1.4E-16 124.4 17.1 71 200-271 103-176 (399)
43 1rp0_A ARA6, thiazole biosynth 99.4 7E-12 2.4E-16 116.5 16.8 158 56-282 38-217 (284)
44 2wdq_A Succinate dehydrogenase 99.4 8.8E-12 3E-16 127.4 18.5 187 56-261 6-207 (588)
45 2h88_A Succinate dehydrogenase 99.4 9.7E-12 3.3E-16 127.3 17.9 186 56-261 17-218 (621)
46 1d4d_A Flavocytochrome C fumar 99.4 2.2E-11 7.5E-16 124.4 20.6 193 56-267 125-326 (572)
47 3alj_A 2-methyl-3-hydroxypyrid 99.4 3.8E-11 1.3E-15 116.6 20.4 67 199-269 102-168 (379)
48 3e1t_A Halogenase; flavoprotei 99.4 1.6E-11 5.3E-16 124.1 18.2 70 200-270 107-181 (512)
49 2weu_A Tryptophan 5-halogenase 99.4 2E-11 6.8E-16 123.4 18.2 72 198-270 167-240 (511)
50 2gmh_A Electron transfer flavo 99.4 2.8E-11 9.4E-16 123.8 19.3 72 200-271 140-231 (584)
51 3lov_A Protoporphyrinogen oxid 99.3 4.6E-11 1.6E-15 119.7 20.3 57 205-264 237-294 (475)
52 3nks_A Protoporphyrinogen oxid 99.3 3.3E-12 1.1E-16 128.1 10.2 56 204-260 234-290 (477)
53 2e5v_A L-aspartate oxidase; ar 99.3 2.8E-11 9.5E-16 120.7 16.6 173 59-261 1-177 (472)
54 2ywl_A Thioredoxin reductase r 99.3 3.1E-11 1E-15 104.1 14.6 66 202-270 54-119 (180)
55 1kf6_A Fumarate reductase flav 99.3 5.8E-11 2E-15 121.6 18.8 186 56-262 4-199 (602)
56 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 8E-12 2.8E-16 119.6 11.4 155 58-259 2-164 (342)
57 3qvp_A Glucose oxidase; oxidor 99.3 1.4E-11 4.9E-16 124.9 13.3 204 56-270 18-304 (583)
58 1w4x_A Phenylacetone monooxyge 99.3 1.7E-11 5.8E-16 124.6 14.0 78 204-286 94-175 (542)
59 4a9w_A Monooxygenase; baeyer-v 99.3 1.9E-11 6.5E-16 117.4 13.4 59 202-261 74-133 (357)
60 2vou_A 2,6-dihydroxypyridine h 99.3 7.9E-11 2.7E-15 115.1 17.6 65 201-268 96-160 (397)
61 3lxd_A FAD-dependent pyridine 99.3 2.4E-10 8.3E-15 112.2 21.0 66 206-271 196-263 (415)
62 2vvm_A Monoamine oxidase N; FA 99.3 5.3E-11 1.8E-15 119.9 15.7 57 204-260 255-312 (495)
63 3k7m_X 6-hydroxy-L-nicotine ox 99.3 4.4E-11 1.5E-15 118.2 14.8 45 58-104 2-46 (431)
64 1chu_A Protein (L-aspartate ox 99.3 6E-11 2E-15 120.1 16.0 184 56-261 7-209 (540)
65 1yvv_A Amine oxidase, flavin-c 99.3 1.6E-11 5.4E-16 117.1 10.1 43 218-260 119-162 (336)
66 2bcg_G Secretory pathway GDP d 99.2 1.2E-11 4.2E-16 122.8 9.5 58 204-262 242-302 (453)
67 3o0h_A Glutathione reductase; 99.2 7.4E-11 2.5E-15 118.3 15.1 69 203-271 231-302 (484)
68 1k0i_A P-hydroxybenzoate hydro 99.2 6.4E-11 2.2E-15 115.6 14.1 68 202-270 101-172 (394)
69 3jsk_A Cypbp37 protein; octame 99.2 7.1E-11 2.4E-15 110.8 13.5 42 56-97 78-119 (344)
70 2xdo_A TETX2 protein; tetracyc 99.2 9.4E-11 3.2E-15 114.6 14.9 65 201-268 125-189 (398)
71 2zbw_A Thioredoxin reductase; 99.2 7E-11 2.4E-15 112.6 13.4 118 56-260 4-121 (335)
72 1mo9_A ORF3; nucleotide bindin 99.2 1.2E-10 4.2E-15 117.7 15.7 69 203-271 254-329 (523)
73 3ces_A MNMG, tRNA uridine 5-ca 99.2 1.5E-11 5E-16 124.7 8.3 60 200-260 120-181 (651)
74 2cul_A Glucose-inhibited divis 99.2 1.5E-10 5.2E-15 104.0 14.1 59 202-261 66-126 (232)
75 3p1w_A Rabgdi protein; GDI RAB 99.2 1.7E-11 6E-16 120.6 8.4 56 204-259 256-313 (475)
76 4fk1_A Putative thioredoxin re 99.2 6E-11 2.1E-15 111.5 11.8 38 56-96 5-42 (304)
77 3fim_B ARYL-alcohol oxidase; A 99.2 2.8E-11 9.6E-16 122.5 9.9 61 210-270 214-287 (566)
78 2aqj_A Tryptophan halogenase, 99.2 3.7E-11 1.2E-15 122.2 10.7 75 195-270 156-232 (538)
79 3gyx_A Adenylylsulfate reducta 99.2 2E-10 6.8E-15 118.4 16.1 183 56-261 21-234 (662)
80 2dkh_A 3-hydroxybenzoate hydro 99.2 2.3E-10 8E-15 118.4 16.7 71 200-271 137-221 (639)
81 3ab1_A Ferredoxin--NADP reduct 99.2 1.1E-10 3.9E-15 112.4 13.2 118 56-260 13-131 (360)
82 3f8d_A Thioredoxin reductase ( 99.2 8.5E-11 2.9E-15 111.2 12.0 112 56-260 14-125 (323)
83 3c96_A Flavin-containing monoo 99.2 2.8E-10 9.7E-15 111.6 16.0 68 200-269 103-177 (410)
84 1jnr_A Adenylylsulfate reducta 99.2 4.4E-10 1.5E-14 116.2 18.1 177 56-261 21-219 (643)
85 2r0c_A REBC; flavin adenine di 99.2 4.4E-10 1.5E-14 114.3 17.8 67 201-271 135-206 (549)
86 2v3a_A Rubredoxin reductase; a 99.2 1.3E-09 4.5E-14 105.8 20.0 66 206-271 189-255 (384)
87 2zxi_A TRNA uridine 5-carboxym 99.2 3E-11 1E-15 122.0 8.4 59 200-259 119-179 (637)
88 3gwf_A Cyclohexanone monooxyge 99.2 1.3E-10 4.5E-15 117.5 13.1 60 201-260 84-147 (540)
89 2q0l_A TRXR, thioredoxin reduc 99.2 1.5E-10 5E-15 109.1 12.4 58 202-260 57-114 (311)
90 2gjc_A Thiazole biosynthetic e 99.2 7.2E-10 2.5E-14 103.4 16.3 43 56-98 64-106 (326)
91 3d1c_A Flavin-containing putat 99.2 5.8E-11 2E-15 114.7 9.4 59 201-260 85-143 (369)
92 3lzw_A Ferredoxin--NADP reduct 99.2 1.3E-10 4.4E-15 110.5 11.6 116 56-259 6-122 (332)
93 3q9t_A Choline dehydrogenase a 99.1 9.1E-11 3.1E-15 119.0 9.5 199 56-270 5-281 (577)
94 3cty_A Thioredoxin reductase; 99.1 2.8E-10 9.4E-15 107.7 12.1 113 55-260 14-126 (319)
95 4ap3_A Steroid monooxygenase; 99.1 2.7E-10 9.3E-15 115.4 12.8 60 201-260 96-159 (549)
96 3cp8_A TRNA uridine 5-carboxym 99.1 6.7E-11 2.3E-15 119.9 8.1 60 200-260 113-174 (641)
97 4dna_A Probable glutathione re 99.1 7.6E-10 2.6E-14 110.3 15.8 68 203-271 210-282 (463)
98 3uox_A Otemo; baeyer-villiger 99.1 1.3E-10 4.4E-15 117.7 10.3 60 202-261 85-148 (545)
99 2bry_A NEDD9 interacting prote 99.1 2.8E-10 9.4E-15 114.2 12.6 60 201-260 163-230 (497)
100 2e4g_A Tryptophan halogenase; 99.1 3.8E-10 1.3E-14 114.9 13.7 72 198-270 188-262 (550)
101 2gv8_A Monooxygenase; FMO, FAD 99.1 4.5E-10 1.5E-14 111.5 13.9 60 201-260 112-177 (447)
102 3ef6_A Toluene 1,2-dioxygenase 99.1 1.1E-09 3.8E-14 107.3 16.3 66 206-271 187-253 (410)
103 3fbs_A Oxidoreductase; structu 99.1 3.5E-10 1.2E-14 105.7 12.2 58 202-260 54-112 (297)
104 3itj_A Thioredoxin reductase 1 99.1 2.3E-10 7.9E-15 109.0 11.2 59 201-260 81-142 (338)
105 1s3e_A Amine oxidase [flavin-c 99.1 1.1E-09 3.8E-14 110.8 16.3 54 204-260 215-268 (520)
106 3iwa_A FAD-dependent pyridine 99.1 1.2E-09 4.1E-14 109.2 16.1 69 203-271 201-270 (472)
107 4gde_A UDP-galactopyranose mut 99.1 2.5E-10 8.7E-15 115.4 11.0 54 204-259 222-275 (513)
108 1pn0_A Phenol 2-monooxygenase; 99.1 4.8E-09 1.6E-13 108.8 20.2 71 200-271 115-240 (665)
109 3fg2_P Putative rubredoxin red 99.1 3.3E-09 1.1E-13 103.7 17.8 66 206-271 186-253 (404)
110 4hb9_A Similarities with proba 99.1 1.9E-09 6.5E-14 105.6 15.9 64 204-271 112-176 (412)
111 2ivd_A PPO, PPOX, protoporphyr 99.1 8.5E-10 2.9E-14 110.5 13.6 58 204-264 238-299 (478)
112 4a5l_A Thioredoxin reductase; 99.1 4E-10 1.4E-14 106.2 10.6 119 56-260 3-121 (314)
113 2q7v_A Thioredoxin reductase; 99.1 6.2E-10 2.1E-14 105.5 11.9 114 56-260 7-123 (325)
114 1vdc_A NTR, NADPH dependent th 99.1 3.8E-10 1.3E-14 107.4 9.9 58 201-260 67-124 (333)
115 4gut_A Lysine-specific histone 99.1 4.7E-10 1.6E-14 117.5 10.7 43 217-259 542-584 (776)
116 2jbv_A Choline oxidase; alcoho 99.0 8.6E-10 2.9E-14 111.8 12.3 203 56-270 12-284 (546)
117 3t37_A Probable dehydrogenase; 99.0 6.4E-10 2.2E-14 112.8 11.3 55 216-270 223-282 (526)
118 2pyx_A Tryptophan halogenase; 99.0 1.2E-09 4.1E-14 110.6 13.2 72 198-270 169-243 (526)
119 3urh_A Dihydrolipoyl dehydroge 99.0 2.7E-09 9.4E-14 107.1 15.3 69 203-271 238-314 (491)
120 1d5t_A Guanine nucleotide diss 99.0 8.4E-10 2.9E-14 108.8 11.3 57 204-261 234-291 (433)
121 1ges_A Glutathione reductase; 99.0 3.2E-09 1.1E-13 105.3 15.2 68 204-271 208-279 (450)
122 2a87_A TRXR, TR, thioredoxin r 99.0 9.7E-10 3.3E-14 104.7 11.1 113 56-260 13-126 (335)
123 2xve_A Flavin-containing monoo 99.0 8.3E-10 2.8E-14 109.8 10.9 61 200-260 97-166 (464)
124 2yg5_A Putrescine oxidase; oxi 99.0 3.5E-09 1.2E-13 105.2 15.2 43 56-100 4-46 (453)
125 1trb_A Thioredoxin reductase; 99.0 9.4E-10 3.2E-14 104.0 10.0 56 203-260 61-116 (320)
126 1zk7_A HGII, reductase, mercur 99.0 3.6E-09 1.2E-13 105.5 14.6 67 203-270 215-284 (467)
127 1zmd_A Dihydrolipoyl dehydroge 99.0 1.2E-09 4.2E-14 109.1 11.1 69 203-271 219-296 (474)
128 2b9w_A Putative aminooxidase; 99.0 2.9E-09 9.8E-14 104.9 13.6 44 56-101 5-49 (424)
129 1fl2_A Alkyl hydroperoxide red 99.0 1.7E-09 5.8E-14 101.7 11.4 58 203-260 55-115 (310)
130 3ntd_A FAD-dependent pyridine 99.0 8.3E-09 2.8E-13 105.6 17.4 66 206-271 194-279 (565)
131 1fec_A Trypanothione reductase 99.0 4.9E-09 1.7E-13 105.1 14.8 68 204-271 231-302 (490)
132 2jae_A L-amino acid oxidase; o 99.0 4.3E-09 1.5E-13 105.7 13.8 54 204-259 239-295 (489)
133 3s5w_A L-ornithine 5-monooxyge 99.0 2.5E-09 8.5E-14 106.6 11.4 56 204-259 127-191 (463)
134 3r9u_A Thioredoxin reductase; 99.0 2.3E-09 7.8E-14 101.0 10.4 111 56-259 3-117 (315)
135 1rsg_A FMS1 protein; FAD bindi 98.9 2.7E-09 9.3E-14 107.8 11.2 43 56-100 7-50 (516)
136 4gcm_A TRXR, thioredoxin reduc 98.9 4.1E-09 1.4E-13 99.2 11.7 39 56-97 5-43 (312)
137 1ju2_A HydroxynitrIle lyase; f 98.9 2.4E-09 8.2E-14 108.3 10.0 60 211-270 201-272 (536)
138 1hyu_A AHPF, alkyl hydroperoxi 98.9 5.6E-09 1.9E-13 105.4 12.3 58 203-260 266-326 (521)
139 4b1b_A TRXR, thioredoxin reduc 98.9 2.3E-08 7.8E-13 100.7 16.3 56 204-259 263-318 (542)
140 2wpf_A Trypanothione reductase 98.9 5.3E-09 1.8E-13 104.9 11.7 68 204-271 235-306 (495)
141 3ics_A Coenzyme A-disulfide re 98.9 5.6E-08 1.9E-12 99.8 19.3 64 206-271 230-294 (588)
142 3oc4_A Oxidoreductase, pyridin 98.9 6.4E-08 2.2E-12 96.0 18.9 54 206-260 191-244 (452)
143 3ic9_A Dihydrolipoamide dehydr 98.9 1.3E-08 4.4E-13 102.1 14.0 67 204-271 215-288 (492)
144 1gpe_A Protein (glucose oxidas 98.9 8.1E-09 2.8E-13 105.5 12.6 58 213-270 240-308 (587)
145 3dk9_A Grase, GR, glutathione 98.9 1.5E-08 5E-13 101.4 14.0 69 203-271 227-307 (478)
146 3l8k_A Dihydrolipoyl dehydroge 98.9 1.3E-08 4.6E-13 101.3 13.5 40 56-97 3-42 (466)
147 1v59_A Dihydrolipoamide dehydr 98.9 1.9E-08 6.4E-13 100.6 14.1 38 56-95 4-41 (478)
148 1kdg_A CDH, cellobiose dehydro 98.9 1.2E-08 4.2E-13 103.7 12.8 61 210-270 201-272 (546)
149 1dxl_A Dihydrolipoamide dehydr 98.9 3.5E-08 1.2E-12 98.5 15.4 40 56-97 5-44 (470)
150 1ojt_A Surface protein; redox- 98.9 2.1E-08 7E-13 100.4 13.5 38 56-95 5-42 (482)
151 1n4w_A CHOD, cholesterol oxida 98.8 2E-09 6.7E-14 108.3 5.8 59 210-268 227-297 (504)
152 1b37_A Protein (polyamine oxid 98.8 3E-08 1E-12 99.0 14.4 56 204-259 206-269 (472)
153 4dsg_A UDP-galactopyranose mut 98.8 1E-08 3.5E-13 102.5 10.9 43 56-100 8-51 (484)
154 3kd9_A Coenzyme A disulfide re 98.8 6.3E-08 2.2E-12 96.0 16.6 64 206-271 192-256 (449)
155 3oc4_A Oxidoreductase, pyridin 98.8 7.6E-09 2.6E-13 102.7 9.2 48 213-260 67-115 (452)
156 3lad_A Dihydrolipoamide dehydr 98.8 1.9E-08 6.4E-13 100.6 11.8 39 56-96 2-40 (476)
157 2qae_A Lipoamide, dihydrolipoy 98.8 6.7E-08 2.3E-12 96.3 15.8 39 57-97 2-40 (468)
158 3qfa_A Thioredoxin reductase 1 98.8 1E-07 3.5E-12 96.2 16.9 37 54-92 29-65 (519)
159 3lad_A Dihydrolipoamide dehydr 98.8 2.4E-07 8.3E-12 92.5 19.5 55 206-260 223-280 (476)
160 2a8x_A Dihydrolipoyl dehydroge 98.8 5.7E-08 1.9E-12 96.7 14.0 52 206-260 93-146 (464)
161 3klj_A NAD(FAD)-dependent dehy 98.8 1.2E-08 4E-13 98.8 8.4 46 212-259 70-115 (385)
162 3k30_A Histamine dehydrogenase 98.8 1.1E-08 3.7E-13 106.9 8.7 61 204-266 567-631 (690)
163 3dgh_A TRXR-1, thioredoxin red 98.8 9.9E-08 3.4E-12 95.5 15.4 34 56-91 8-41 (483)
164 4eqs_A Coenzyme A disulfide re 98.8 9.9E-08 3.4E-12 94.1 14.7 61 208-272 192-253 (437)
165 2yqu_A 2-oxoglutarate dehydrog 98.8 6.8E-08 2.3E-12 95.9 13.7 38 57-96 1-38 (455)
166 1ebd_A E3BD, dihydrolipoamide 98.7 9.1E-08 3.1E-12 95.0 14.2 52 206-260 93-145 (455)
167 2yqu_A 2-oxoglutarate dehydrog 98.7 5.5E-08 1.9E-12 96.6 12.3 65 206-270 210-277 (455)
168 1coy_A Cholesterol oxidase; ox 98.7 1E-08 3.6E-13 103.0 7.2 59 210-268 232-302 (507)
169 2iid_A L-amino-acid oxidase; f 98.7 2.1E-07 7.2E-12 93.5 16.8 42 56-99 32-73 (498)
170 3lxd_A FAD-dependent pyridine 98.7 8.7E-09 3E-13 101.1 6.2 46 212-259 73-118 (415)
171 1xdi_A RV3303C-LPDA; reductase 98.7 1.1E-07 3.9E-12 95.5 14.4 39 57-96 2-41 (499)
172 2hqm_A GR, grase, glutathione 98.7 8.1E-08 2.8E-12 96.0 12.6 37 56-95 10-46 (479)
173 3kd9_A Coenzyme A disulfide re 98.7 6.1E-08 2.1E-12 96.1 11.1 38 57-94 3-40 (449)
174 3dgz_A Thioredoxin reductase 2 98.7 2.4E-07 8E-12 92.8 15.4 34 56-91 5-38 (488)
175 1q1r_A Putidaredoxin reductase 98.7 2E-08 6.8E-13 99.0 7.1 47 212-260 68-114 (431)
176 3c4a_A Probable tryptophan hyd 98.7 1.3E-08 4.4E-13 98.7 5.2 51 200-261 94-144 (381)
177 2r9z_A Glutathione amide reduc 98.7 3.4E-07 1.2E-11 91.0 15.5 37 56-95 3-39 (463)
178 1q1r_A Putidaredoxin reductase 98.7 2.4E-07 8.1E-12 91.2 14.2 66 206-271 193-262 (431)
179 3sx6_A Sulfide-quinone reducta 98.7 4.2E-08 1.4E-12 96.9 8.8 48 210-260 65-112 (437)
180 3kkj_A Amine oxidase, flavin-c 98.7 1.5E-08 5.2E-13 93.4 5.3 41 57-99 2-42 (336)
181 2r9z_A Glutathione amide reduc 98.7 1.5E-07 5E-12 93.6 12.4 64 208-271 211-278 (463)
182 3ics_A Coenzyme A-disulfide re 98.6 1.9E-07 6.4E-12 95.9 13.4 50 210-259 99-151 (588)
183 3h8l_A NADH oxidase; membrane 98.6 2.8E-08 9.6E-13 97.3 6.5 50 210-260 62-113 (409)
184 1nhp_A NADH peroxidase; oxidor 98.6 1.1E-07 3.6E-12 94.3 10.6 48 213-260 65-115 (447)
185 2gqw_A Ferredoxin reductase; f 98.6 3.3E-07 1.1E-11 89.5 13.9 62 206-271 189-251 (408)
186 1xdi_A RV3303C-LPDA; reductase 98.6 1.3E-07 4.4E-12 95.1 11.2 66 206-271 225-293 (499)
187 3cgb_A Pyridine nucleotide-dis 98.6 9.1E-08 3.1E-12 95.6 9.9 45 216-260 105-152 (480)
188 2cdu_A NADPH oxidase; flavoenz 98.6 9.3E-08 3.2E-12 94.8 9.6 49 212-260 66-117 (452)
189 1xhc_A NADH oxidase /nitrite r 98.6 4.6E-08 1.6E-12 94.1 6.9 32 58-92 9-40 (367)
190 3ntd_A FAD-dependent pyridine 98.6 2.2E-07 7.6E-12 94.9 12.4 46 214-259 68-116 (565)
191 2hqm_A GR, grase, glutathione 98.6 2.2E-07 7.4E-12 92.9 11.4 66 206-271 228-298 (479)
192 3klj_A NAD(FAD)-dependent dehy 98.6 1.8E-07 6.3E-12 90.4 10.5 53 206-271 190-243 (385)
193 2bc0_A NADH oxidase; flavoprot 98.6 9.8E-08 3.3E-12 95.7 8.5 48 213-260 101-149 (490)
194 3uox_A Otemo; baeyer-villiger 98.6 3.9E-06 1.3E-10 84.9 20.2 46 210-260 344-391 (545)
195 3hyw_A Sulfide-quinone reducta 98.6 4.9E-08 1.7E-12 96.2 6.1 34 59-92 4-37 (430)
196 2eq6_A Pyruvate dehydrogenase 98.6 4.8E-07 1.7E-11 89.9 13.2 66 206-271 212-285 (464)
197 1ojt_A Surface protein; redox- 98.6 2.4E-07 8.3E-12 92.6 11.0 66 206-271 228-300 (482)
198 1m6i_A Programmed cell death p 98.6 3.7E-07 1.3E-11 91.5 12.2 67 206-272 228-295 (493)
199 3ef6_A Toluene 1,2-dioxygenase 98.6 1E-07 3.5E-12 93.2 8.0 44 214-259 67-110 (410)
200 1v59_A Dihydrolipoamide dehydr 98.6 2E-07 6.9E-12 93.1 10.4 65 206-270 226-300 (478)
201 1onf_A GR, grase, glutathione 98.6 3.9E-07 1.3E-11 91.5 12.4 36 57-95 2-37 (500)
202 3fg2_P Putative rubredoxin red 98.6 1.6E-07 5.5E-12 91.7 9.3 45 212-259 65-109 (404)
203 1ebd_A E3BD, dihydrolipoamide 98.5 2.4E-07 8E-12 92.0 10.5 65 206-270 213-283 (455)
204 2eq6_A Pyruvate dehydrogenase 98.5 7.9E-07 2.7E-11 88.4 14.0 36 57-95 6-41 (464)
205 1lvl_A Dihydrolipoamide dehydr 98.5 1.1E-06 3.8E-11 87.1 15.1 38 56-96 4-41 (458)
206 3cgb_A Pyridine nucleotide-dis 98.5 3.1E-07 1.1E-11 91.8 11.0 65 206-271 229-294 (480)
207 2v3a_A Rubredoxin reductase; a 98.5 2.4E-07 8.4E-12 89.7 9.6 36 56-91 3-38 (384)
208 3vrd_B FCCB subunit, flavocyto 98.5 8.7E-07 3E-11 86.3 13.5 59 212-270 210-268 (401)
209 3pl8_A Pyranose 2-oxidase; sub 98.5 4.2E-07 1.4E-11 93.3 11.7 55 217-271 273-336 (623)
210 2qae_A Lipoamide, dihydrolipoy 98.5 5.3E-07 1.8E-11 89.8 11.8 66 206-271 217-290 (468)
211 3h28_A Sulfide-quinone reducta 98.5 8E-08 2.7E-12 94.7 5.7 37 58-94 3-39 (430)
212 1y56_A Hypothetical protein PH 98.5 2.1E-07 7.1E-12 93.2 8.6 54 206-260 163-219 (493)
213 1onf_A GR, grase, glutathione 98.5 5.6E-07 1.9E-11 90.3 11.8 65 206-270 219-288 (500)
214 2a8x_A Dihydrolipoyl dehydroge 98.5 5.7E-07 1.9E-11 89.5 11.5 66 206-271 214-285 (464)
215 1m6i_A Programmed cell death p 98.5 1.5E-07 5.3E-12 94.2 7.1 40 56-95 10-49 (493)
216 3fbs_A Oxidoreductase; structu 98.5 5E-07 1.7E-11 84.0 9.5 57 210-270 180-237 (297)
217 2gqw_A Ferredoxin reductase; f 98.4 2.7E-07 9.1E-12 90.2 7.7 44 215-260 70-113 (408)
218 2vdc_G Glutamate synthase [NAD 98.4 9E-08 3.1E-12 94.6 3.8 38 56-95 121-158 (456)
219 1xhc_A NADH oxidase /nitrite r 98.4 8.9E-07 3E-11 85.1 10.7 61 206-271 185-246 (367)
220 1nhp_A NADH peroxidase; oxidor 98.4 1.2E-06 4.2E-11 86.6 12.0 54 206-260 193-246 (447)
221 4fk1_A Putative thioredoxin re 98.4 1.1E-06 3.7E-11 82.2 10.9 61 210-271 186-248 (304)
222 1dxl_A Dihydrolipoamide dehydr 98.4 4.9E-07 1.7E-11 90.1 8.3 65 206-270 220-292 (470)
223 2cdu_A NADPH oxidase; flavoenz 98.4 2.9E-06 9.9E-11 84.0 13.5 59 206-265 193-253 (452)
224 2gag_A Heterotetrameric sarcos 98.4 1E-06 3.5E-11 95.1 11.0 37 57-95 128-164 (965)
225 1lvl_A Dihydrolipoamide dehydr 98.4 1.2E-06 4.1E-11 86.9 10.5 62 207-270 215-281 (458)
226 3fpz_A Thiazole biosynthetic e 98.4 2.6E-07 9E-12 87.3 5.4 43 56-98 64-106 (326)
227 4eqs_A Coenzyme A disulfide re 98.4 2.1E-06 7.2E-11 84.5 11.9 47 214-260 67-116 (437)
228 4b63_A L-ornithine N5 monooxyg 98.3 7.8E-07 2.7E-11 89.2 8.3 55 204-258 145-212 (501)
229 2bc0_A NADH oxidase; flavoprot 98.3 3.4E-06 1.1E-10 84.5 12.0 54 206-260 238-291 (490)
230 2x8g_A Thioredoxin glutathione 98.3 1.3E-05 4.4E-10 82.3 15.8 34 56-91 106-139 (598)
231 4a5l_A Thioredoxin reductase; 98.3 1.1E-05 3.8E-10 75.5 13.8 33 58-92 153-185 (314)
232 4g6h_A Rotenone-insensitive NA 98.3 9.9E-07 3.4E-11 88.3 6.8 35 56-92 41-75 (502)
233 2zbw_A Thioredoxin reductase; 98.2 7E-06 2.4E-10 77.7 11.0 61 210-270 197-263 (335)
234 2e1m_A L-glutamate oxidase; L- 98.2 1.3E-06 4.5E-11 83.4 5.7 42 56-99 43-85 (376)
235 3s5w_A L-ornithine 5-monooxyge 98.2 2.7E-05 9.2E-10 77.3 15.4 45 217-261 329-378 (463)
236 3hdq_A UDP-galactopyranose mut 98.2 1.5E-06 5.3E-11 83.7 5.8 43 56-100 28-70 (397)
237 3dgh_A TRXR-1, thioredoxin red 98.1 1E-05 3.5E-10 80.8 11.5 66 206-271 229-303 (483)
238 1trb_A Thioredoxin reductase; 98.1 1.9E-05 6.6E-10 74.1 12.7 52 209-260 189-247 (320)
239 1i8t_A UDP-galactopyranose mut 98.1 1.9E-06 6.6E-11 82.7 4.9 42 57-100 1-42 (367)
240 3ab1_A Ferredoxin--NADP reduct 98.1 1.3E-05 4.3E-10 76.8 10.6 61 210-270 208-274 (360)
241 1v0j_A UDP-galactopyranose mut 98.1 2.4E-06 8.1E-11 83.1 5.5 44 56-100 6-49 (399)
242 3d1c_A Flavin-containing putat 98.1 1.6E-05 5.5E-10 76.2 11.4 60 206-265 216-278 (369)
243 4g6h_A Rotenone-insensitive NA 98.1 1.2E-05 4E-10 80.5 10.2 57 205-261 273-333 (502)
244 3f8d_A Thioredoxin reductase ( 98.1 2.2E-05 7.5E-10 73.6 11.3 56 216-271 202-263 (323)
245 1sez_A Protoporphyrinogen oxid 98.1 2.9E-06 9.8E-11 85.3 5.4 43 56-100 12-54 (504)
246 3cty_A Thioredoxin reductase; 98.0 1.2E-05 4.1E-10 75.5 9.2 59 212-270 198-263 (319)
247 1gte_A Dihydropyrimidine dehyd 98.0 1.4E-06 4.8E-11 94.8 3.0 37 57-95 187-224 (1025)
248 3dgz_A Thioredoxin reductase 2 98.0 3.7E-05 1.3E-09 76.8 12.6 66 206-271 227-301 (488)
249 3l8k_A Dihydrolipoyl dehydroge 98.0 1.7E-05 6E-10 78.7 9.6 53 219-271 226-285 (466)
250 2bi7_A UDP-galactopyranose mut 98.0 6.3E-06 2.2E-10 79.6 5.4 42 57-100 3-44 (384)
251 1ps9_A 2,4-dienoyl-COA reducta 97.9 0.0002 6.9E-09 74.4 17.0 49 209-260 578-628 (671)
252 3itj_A Thioredoxin reductase 1 97.9 4.1E-05 1.4E-09 72.3 10.0 33 58-92 174-206 (338)
253 2q7v_A Thioredoxin reductase; 97.9 7.9E-05 2.7E-09 70.1 11.1 32 59-92 154-185 (325)
254 3qfa_A Thioredoxin reductase 1 97.9 0.00013 4.3E-09 73.5 13.2 55 206-260 252-315 (519)
255 2q0l_A TRXR, thioredoxin reduc 97.9 8E-05 2.7E-09 69.5 11.0 33 58-92 144-176 (311)
256 3lzw_A Ferredoxin--NADP reduct 97.8 2.8E-05 9.6E-10 73.2 7.8 57 214-270 199-261 (332)
257 3ihm_A Styrene monooxygenase A 97.8 9.3E-06 3.2E-10 79.8 4.2 35 56-92 21-55 (430)
258 4gcm_A TRXR, thioredoxin reduc 97.8 4E-05 1.4E-09 71.7 8.4 34 58-93 146-179 (312)
259 1fl2_A Alkyl hydroperoxide red 97.8 7.3E-05 2.5E-09 69.7 10.1 33 58-92 145-177 (310)
260 3gwf_A Cyclohexanone monooxyge 97.8 0.00049 1.7E-08 69.3 16.1 52 210-265 336-390 (540)
261 2x8g_A Thioredoxin glutathione 97.8 0.00026 9E-09 72.5 13.8 63 208-270 330-408 (598)
262 3h28_A Sulfide-quinone reducta 97.7 0.00047 1.6E-08 67.5 14.7 59 206-266 202-262 (430)
263 3sx6_A Sulfide-quinone reducta 97.7 0.00036 1.2E-08 68.5 13.5 62 206-269 210-279 (437)
264 3r9u_A Thioredoxin reductase; 97.7 0.0002 6.8E-09 66.8 11.0 46 215-260 194-244 (315)
265 1vdc_A NTR, NADPH dependent th 97.7 0.00017 6E-09 67.9 10.5 33 58-92 160-192 (333)
266 3g5s_A Methylenetetrahydrofola 97.6 4.5E-05 1.5E-09 72.1 5.2 35 58-94 2-36 (443)
267 4ap3_A Steroid monooxygenase; 97.6 0.00058 2E-08 69.0 13.3 34 58-93 192-225 (549)
268 2a87_A TRXR, TR, thioredoxin r 97.6 0.00022 7.7E-09 67.2 9.6 33 58-92 156-188 (335)
269 2z3y_A Lysine-specific histone 97.6 6E-05 2.1E-09 78.1 5.7 41 56-98 106-146 (662)
270 2xag_A Lysine-specific histone 97.6 6.4E-05 2.2E-09 79.5 5.7 40 56-97 277-316 (852)
271 1o94_A Tmadh, trimethylamine d 97.5 8.7E-05 3E-09 77.8 6.0 40 56-97 388-427 (729)
272 1cjc_A Protein (adrenodoxin re 97.5 0.00085 2.9E-08 66.2 12.0 46 217-262 270-335 (460)
273 1ps9_A 2,4-dienoyl-COA reducta 97.4 0.00012 4E-09 76.2 5.8 38 56-95 372-409 (671)
274 1hyu_A AHPF, alkyl hydroperoxi 97.4 0.00044 1.5E-08 69.5 9.8 33 58-92 356-388 (521)
275 3ayj_A Pro-enzyme of L-phenyla 97.3 0.0001 3.6E-09 75.8 4.1 37 56-94 55-100 (721)
276 2gag_A Heterotetrameric sarcos 97.3 0.00057 1.9E-08 73.9 9.9 56 213-268 325-392 (965)
277 1lqt_A FPRA; NADP+ derivative, 97.3 0.00078 2.7E-08 66.4 9.7 56 207-262 249-328 (456)
278 1lqt_A FPRA; NADP+ derivative, 97.3 0.00014 4.7E-09 71.8 3.9 39 57-95 3-46 (456)
279 1cjc_A Protein (adrenodoxin re 97.3 0.00021 7.1E-09 70.6 5.2 40 56-95 5-44 (460)
280 1vg0_A RAB proteins geranylger 97.2 0.00027 9.2E-09 71.8 5.7 55 204-258 378-435 (650)
281 1o94_A Tmadh, trimethylamine d 97.2 0.00057 1.9E-08 71.6 8.3 32 59-92 530-563 (729)
282 1gte_A Dihydropyrimidine dehyd 97.2 0.0032 1.1E-07 68.5 13.5 32 59-92 334-366 (1025)
283 3h8l_A NADH oxidase; membrane 97.1 0.0017 5.7E-08 63.1 10.1 58 206-267 220-277 (409)
284 2vdc_G Glutamate synthase [NAD 97.1 0.00073 2.5E-08 66.6 7.3 33 58-92 265-298 (456)
285 3urh_A Dihydrolipoyl dehydroge 97.0 0.0025 8.5E-08 63.5 10.0 35 58-94 199-233 (491)
286 1w4x_A Phenylacetone monooxyge 96.9 0.018 6.2E-07 58.0 15.0 33 58-92 187-219 (542)
287 3o0h_A Glutathione reductase; 96.7 0.0048 1.6E-07 61.3 9.2 35 58-94 192-226 (484)
288 4a9w_A Monooxygenase; baeyer-v 96.7 0.0013 4.5E-08 62.2 4.7 31 58-91 164-194 (357)
289 3dk9_A Grase, GR, glutathione 96.6 0.0059 2E-07 60.5 9.5 35 58-94 188-222 (478)
290 2xve_A Flavin-containing monoo 96.5 0.006 2E-07 60.3 8.5 34 57-92 197-230 (464)
291 2gv8_A Monooxygenase; FMO, FAD 96.5 0.0035 1.2E-07 61.6 6.3 33 58-92 213-246 (447)
292 1y56_A Hypothetical protein PH 96.2 0.0069 2.4E-07 60.3 6.7 59 212-270 265-324 (493)
293 3fwz_A Inner membrane protein 95.6 0.018 6.2E-07 46.3 5.7 34 57-92 7-40 (140)
294 1lss_A TRK system potassium up 95.4 0.016 5.4E-07 46.4 4.9 32 58-91 5-36 (140)
295 3k30_A Histamine dehydrogenase 95.4 0.065 2.2E-06 55.6 10.5 34 59-94 525-560 (690)
296 2g1u_A Hypothetical protein TM 95.2 0.024 8.3E-07 46.5 5.3 34 57-92 19-52 (155)
297 3llv_A Exopolyphosphatase-rela 95.1 0.023 7.8E-07 45.7 4.8 33 58-92 7-39 (141)
298 3ic5_A Putative saccharopine d 95.1 0.026 8.9E-07 43.5 5.0 33 57-91 5-38 (118)
299 3t37_A Probable dehydrogenase; 94.9 0.018 6.1E-07 57.8 4.3 38 7-45 15-52 (526)
300 3qvp_A Glucose oxidase; oxidor 94.8 0.019 6.6E-07 58.0 4.2 37 7-44 17-53 (583)
301 3q9t_A Choline dehydrogenase a 94.7 0.023 7.8E-07 57.5 4.5 38 7-45 4-41 (577)
302 3fpz_A Thiazole biosynthetic e 94.7 0.031 1.1E-06 52.1 5.2 37 8-44 64-100 (326)
303 1id1_A Putative potassium chan 94.6 0.041 1.4E-06 44.9 5.2 32 58-91 4-35 (153)
304 1vg0_A RAB proteins geranylger 94.6 0.07 2.4E-06 54.3 7.7 43 55-99 6-48 (650)
305 3ado_A Lambda-crystallin; L-gu 94.4 0.033 1.1E-06 51.5 4.5 33 57-91 6-38 (319)
306 1pzg_A LDH, lactate dehydrogen 94.2 0.052 1.8E-06 50.7 5.5 35 56-92 8-43 (331)
307 1ges_A Glutathione reductase; 94.1 0.043 1.5E-06 53.8 5.0 35 58-94 168-202 (450)
308 4dio_A NAD(P) transhydrogenase 93.8 0.13 4.5E-06 48.9 7.5 34 57-92 190-223 (405)
309 3k6j_A Protein F01G10.3, confi 93.8 0.087 3E-06 51.3 6.3 34 57-92 54-87 (460)
310 2hmt_A YUAA protein; RCK, KTN, 93.8 0.051 1.8E-06 43.5 4.1 32 58-91 7-38 (144)
311 1f0y_A HCDH, L-3-hydroxyacyl-C 93.7 0.069 2.4E-06 49.2 5.3 32 58-91 16-47 (302)
312 3p2y_A Alanine dehydrogenase/p 93.5 0.16 5.4E-06 48.0 7.4 34 57-92 184-217 (381)
313 3l4b_C TRKA K+ channel protien 93.5 0.056 1.9E-06 47.1 4.1 32 59-92 2-33 (218)
314 1zmd_A Dihydrolipoyl dehydroge 93.5 0.066 2.2E-06 52.9 5.0 35 58-94 179-213 (474)
315 4e12_A Diketoreductase; oxidor 93.4 0.084 2.9E-06 48.1 5.3 32 58-91 5-36 (283)
316 3fim_B ARYL-alcohol oxidase; A 93.4 0.038 1.3E-06 55.8 3.1 37 9-46 2-38 (566)
317 3ic9_A Dihydrolipoamide dehydr 93.3 0.072 2.5E-06 52.9 5.0 35 58-94 175-209 (492)
318 3i83_A 2-dehydropantoate 2-red 93.2 0.079 2.7E-06 49.3 4.8 33 58-92 3-35 (320)
319 1kyq_A Met8P, siroheme biosynt 93.1 0.075 2.6E-06 47.8 4.3 33 57-91 13-45 (274)
320 2o3j_A UDP-glucose 6-dehydroge 93.1 0.097 3.3E-06 51.6 5.4 34 58-91 10-43 (481)
321 3hyw_A Sulfide-quinone reducta 92.9 0.07 2.4E-06 51.9 4.2 64 205-270 201-266 (430)
322 3dfz_A SIRC, precorrin-2 dehyd 92.9 0.11 3.8E-06 45.2 4.9 34 56-91 30-63 (223)
323 2dpo_A L-gulonate 3-dehydrogen 92.8 0.092 3.1E-06 48.7 4.5 33 58-92 7-39 (319)
324 3hn2_A 2-dehydropantoate 2-red 92.8 0.083 2.8E-06 48.9 4.2 32 58-91 3-34 (312)
325 4b1b_A TRXR, thioredoxin reduc 92.7 0.099 3.4E-06 52.4 5.0 33 58-92 224-256 (542)
326 2ewd_A Lactate dehydrogenase,; 92.7 0.11 3.9E-06 48.1 5.1 34 57-92 4-38 (317)
327 3kkj_A Amine oxidase, flavin-c 92.6 0.12 4.1E-06 46.2 5.1 34 9-44 2-35 (336)
328 2y0c_A BCEC, UDP-glucose dehyd 92.6 0.1 3.5E-06 51.4 4.9 33 57-91 8-40 (478)
329 1zk7_A HGII, reductase, mercur 92.6 0.11 3.6E-06 51.2 5.0 35 58-94 177-211 (467)
330 1lld_A L-lactate dehydrogenase 92.5 0.11 3.9E-06 48.1 4.9 33 57-91 7-41 (319)
331 3lk7_A UDP-N-acetylmuramoylala 92.5 0.13 4.4E-06 50.4 5.4 33 57-91 9-41 (451)
332 2raf_A Putative dinucleotide-b 92.4 0.14 4.7E-06 44.3 5.0 34 57-92 19-52 (209)
333 3k96_A Glycerol-3-phosphate de 92.3 0.13 4.4E-06 48.6 4.9 33 57-91 29-61 (356)
334 2hjr_A Malate dehydrogenase; m 92.3 0.14 4.7E-06 47.8 5.0 32 58-91 15-47 (328)
335 1zej_A HBD-9, 3-hydroxyacyl-CO 92.2 0.14 4.7E-06 46.8 4.8 33 57-92 12-44 (293)
336 4g65_A TRK system potassium up 92.1 0.086 2.9E-06 51.7 3.6 34 57-92 3-36 (461)
337 2ew2_A 2-dehydropantoate 2-red 92.1 0.13 4.5E-06 47.4 4.8 32 58-91 4-35 (316)
338 3l6d_A Putative oxidoreductase 92.1 0.19 6.4E-06 46.3 5.7 35 56-92 8-42 (306)
339 3g17_A Similar to 2-dehydropan 92.1 0.098 3.4E-06 47.9 3.8 32 58-91 3-34 (294)
340 3ghy_A Ketopantoate reductase 92.1 0.14 4.7E-06 47.9 4.9 32 58-91 4-35 (335)
341 3oz2_A Digeranylgeranylglycero 92.0 0.082 2.8E-06 50.4 3.3 36 7-44 2-37 (397)
342 1ks9_A KPA reductase;, 2-dehyd 92.0 0.14 4.9E-06 46.6 4.8 32 59-92 2-33 (291)
343 3tl2_A Malate dehydrogenase; c 91.9 0.19 6.4E-06 46.4 5.4 33 57-91 8-41 (315)
344 1jw9_B Molybdopterin biosynthe 91.8 0.15 5.3E-06 45.3 4.6 33 57-91 31-64 (249)
345 2v6b_A L-LDH, L-lactate dehydr 91.8 0.16 5.4E-06 46.8 4.8 31 59-91 2-34 (304)
346 1t2d_A LDH-P, L-lactate dehydr 91.7 0.19 6.4E-06 46.7 5.2 33 57-91 4-37 (322)
347 3doj_A AT3G25530, dehydrogenas 91.6 0.2 6.8E-06 46.3 5.3 35 56-92 20-54 (310)
348 3vtf_A UDP-glucose 6-dehydroge 91.5 0.2 6.9E-06 48.4 5.4 34 56-91 20-53 (444)
349 3gg2_A Sugar dehydrogenase, UD 91.5 0.16 5.5E-06 49.6 4.8 33 58-92 3-35 (450)
350 3ego_A Probable 2-dehydropanto 91.5 0.17 5.9E-06 46.6 4.8 31 58-91 3-33 (307)
351 1bg6_A N-(1-D-carboxylethyl)-L 91.3 0.18 6.2E-06 47.5 4.9 32 58-91 5-36 (359)
352 2q3e_A UDP-glucose 6-dehydroge 91.3 0.19 6.6E-06 49.3 5.1 34 58-91 6-39 (467)
353 2a9f_A Putative malic enzyme ( 91.2 0.2 7E-06 47.2 4.9 34 56-91 187-221 (398)
354 4a7p_A UDP-glucose dehydrogena 91.0 0.22 7.6E-06 48.4 5.1 34 57-92 8-41 (446)
355 1guz_A Malate dehydrogenase; o 90.9 0.24 8.1E-06 45.7 5.1 34 59-92 2-35 (310)
356 1z82_A Glycerol-3-phosphate de 90.9 0.22 7.4E-06 46.6 4.9 33 57-91 14-46 (335)
357 4dll_A 2-hydroxy-3-oxopropiona 90.9 0.22 7.6E-06 46.2 4.9 35 56-92 30-64 (320)
358 1zcj_A Peroxisomal bifunctiona 90.9 0.19 6.5E-06 49.3 4.6 32 58-91 38-69 (463)
359 3dtt_A NADP oxidoreductase; st 90.9 0.24 8.3E-06 43.9 5.0 35 56-92 18-52 (245)
360 1mo9_A ORF3; nucleotide bindin 90.8 0.21 7.3E-06 49.9 5.0 35 58-94 215-249 (523)
361 3hwr_A 2-dehydropantoate 2-red 90.7 0.23 7.8E-06 46.1 4.7 33 56-91 18-50 (318)
362 3oj0_A Glutr, glutamyl-tRNA re 90.7 0.11 3.7E-06 41.8 2.3 32 58-91 22-53 (144)
363 3qha_A Putative oxidoreductase 90.6 0.2 6.7E-06 45.9 4.2 34 57-92 15-48 (296)
364 2vns_A Metalloreductase steap3 90.6 0.25 8.7E-06 42.8 4.7 33 57-91 28-60 (215)
365 3g0o_A 3-hydroxyisobutyrate de 90.6 0.25 8.5E-06 45.4 4.9 33 57-91 7-39 (303)
366 1mv8_A GMD, GDP-mannose 6-dehy 90.6 0.2 7E-06 48.7 4.5 31 59-91 2-32 (436)
367 1vl6_A Malate oxidoreductase; 90.5 0.26 8.8E-06 46.4 4.9 34 56-91 191-225 (388)
368 3pef_A 6-phosphogluconate dehy 90.5 0.26 8.9E-06 44.9 4.9 33 58-92 2-34 (287)
369 2wpf_A Trypanothione reductase 90.4 0.27 9.2E-06 48.7 5.2 37 58-94 192-229 (495)
370 3l9w_A Glutathione-regulated p 90.2 0.26 9E-06 47.4 4.8 34 57-92 4-37 (413)
371 3vku_A L-LDH, L-lactate dehydr 90.2 0.29 1E-05 45.3 5.0 34 56-91 8-43 (326)
372 1txg_A Glycerol-3-phosphate de 90.2 0.25 8.4E-06 46.1 4.6 30 59-90 2-31 (335)
373 1a5z_A L-lactate dehydrogenase 90.1 0.26 9E-06 45.6 4.6 31 59-91 2-34 (319)
374 1y6j_A L-lactate dehydrogenase 90.0 0.31 1E-05 45.1 5.0 33 57-91 7-41 (318)
375 3pqe_A L-LDH, L-lactate dehydr 90.0 0.32 1.1E-05 45.1 5.1 33 57-91 5-39 (326)
376 1ju2_A HydroxynitrIle lyase; f 90.0 0.18 6E-06 50.6 3.5 35 8-45 25-59 (536)
377 1ldn_A L-lactate dehydrogenase 89.9 0.36 1.2E-05 44.6 5.3 35 57-91 6-40 (316)
378 3mog_A Probable 3-hydroxybutyr 89.8 0.27 9.1E-06 48.4 4.6 33 58-92 6-38 (483)
379 2h78_A Hibadh, 3-hydroxyisobut 89.8 0.28 9.7E-06 45.0 4.6 32 58-91 4-35 (302)
380 2i0z_A NAD(FAD)-utilizing dehy 89.8 0.33 1.1E-05 47.3 5.3 37 6-44 23-59 (447)
381 1jay_A Coenzyme F420H2:NADP+ o 89.7 0.34 1.1E-05 41.7 4.7 31 59-91 2-33 (212)
382 1oju_A MDH, malate dehydrogena 89.6 0.31 1E-05 44.5 4.5 31 59-91 2-34 (294)
383 2x5o_A UDP-N-acetylmuramoylala 89.6 0.2 7E-06 48.7 3.6 33 58-92 6-38 (439)
384 2z3y_A Lysine-specific histone 89.6 0.34 1.2E-05 49.9 5.4 42 218-259 410-457 (662)
385 3c85_A Putative glutathione-re 89.5 0.34 1.2E-05 40.6 4.5 35 57-92 39-73 (183)
386 1ur5_A Malate dehydrogenase; o 89.5 0.34 1.2E-05 44.6 4.9 32 58-91 3-35 (309)
387 3gvi_A Malate dehydrogenase; N 89.5 0.37 1.3E-05 44.6 5.0 34 57-92 7-41 (324)
388 4e21_A 6-phosphogluconate dehy 89.5 0.34 1.2E-05 45.6 4.9 34 57-92 22-55 (358)
389 3pdu_A 3-hydroxyisobutyrate de 89.4 0.29 9.8E-06 44.6 4.3 32 59-92 3-34 (287)
390 3nyc_A D-arginine dehydrogenas 89.3 0.25 8.4E-06 46.8 3.9 40 4-46 4-43 (381)
391 1nyt_A Shikimate 5-dehydrogena 89.3 0.38 1.3E-05 43.3 5.0 32 58-91 120-151 (271)
392 1hyh_A L-hicdh, L-2-hydroxyiso 89.3 0.34 1.2E-05 44.7 4.7 32 58-91 2-35 (309)
393 2uyy_A N-PAC protein; long-cha 89.3 0.45 1.5E-05 43.9 5.5 34 57-92 30-63 (316)
394 3ggo_A Prephenate dehydrogenas 89.2 0.45 1.5E-05 43.9 5.4 33 57-91 33-67 (314)
395 1x13_A NAD(P) transhydrogenase 89.2 0.34 1.2E-05 46.5 4.7 34 57-92 172-205 (401)
396 1pjc_A Protein (L-alanine dehy 89.2 0.35 1.2E-05 45.7 4.8 32 58-91 168-199 (361)
397 3ldh_A Lactate dehydrogenase; 89.2 0.52 1.8E-05 43.6 5.8 33 57-91 21-55 (330)
398 2zqz_A L-LDH, L-lactate dehydr 89.2 0.41 1.4E-05 44.4 5.1 36 56-91 8-43 (326)
399 3dfu_A Uncharacterized protein 89.1 0.14 4.7E-06 44.9 1.7 33 57-91 6-38 (232)
400 1fec_A Trypanothione reductase 89.1 0.38 1.3E-05 47.6 5.2 37 58-94 188-225 (490)
401 3eag_A UDP-N-acetylmuramate:L- 89.1 0.39 1.3E-05 44.6 5.0 34 57-92 4-38 (326)
402 3ius_A Uncharacterized conserv 89.1 0.4 1.4E-05 43.4 5.0 33 58-92 6-38 (286)
403 3cky_A 2-hydroxymethyl glutara 89.1 0.35 1.2E-05 44.2 4.6 33 57-91 4-36 (301)
404 4ezb_A Uncharacterized conserv 89.1 0.39 1.3E-05 44.4 4.9 33 58-92 25-58 (317)
405 3qsg_A NAD-binding phosphogluc 89.0 0.34 1.2E-05 44.7 4.4 33 57-91 24-57 (312)
406 2i6t_A Ubiquitin-conjugating e 89.0 0.38 1.3E-05 44.1 4.7 34 57-92 14-49 (303)
407 3phh_A Shikimate dehydrogenase 88.9 0.4 1.4E-05 43.0 4.7 34 57-92 118-151 (269)
408 3jsk_A Cypbp37 protein; octame 88.8 0.52 1.8E-05 43.9 5.5 37 8-44 78-114 (344)
409 4dna_A Probable glutathione re 88.7 0.4 1.4E-05 47.0 5.0 35 58-94 171-205 (463)
410 1c0p_A D-amino acid oxidase; a 88.7 0.49 1.7E-05 44.5 5.5 35 8-44 5-39 (363)
411 1yqg_A Pyrroline-5-carboxylate 88.7 0.4 1.4E-05 42.9 4.6 31 59-91 2-33 (263)
412 3c4n_A Uncharacterized protein 88.6 0.35 1.2E-05 46.5 4.4 36 9-44 36-71 (405)
413 1evy_A Glycerol-3-phosphate de 88.6 0.27 9.4E-06 46.5 3.6 31 59-91 17-47 (366)
414 3lov_A Protoporphyrinogen oxid 88.5 0.48 1.7E-05 46.5 5.5 40 7-46 2-41 (475)
415 2f1k_A Prephenate dehydrogenas 88.5 0.43 1.5E-05 43.1 4.8 31 59-91 2-32 (279)
416 3p7m_A Malate dehydrogenase; p 88.5 0.48 1.6E-05 43.8 5.0 34 57-92 5-39 (321)
417 3nep_X Malate dehydrogenase; h 88.4 0.42 1.4E-05 44.0 4.6 32 59-92 2-35 (314)
418 3d0o_A L-LDH 1, L-lactate dehy 88.4 0.48 1.7E-05 43.8 5.0 35 57-91 6-40 (317)
419 4aj2_A L-lactate dehydrogenase 88.3 0.56 1.9E-05 43.5 5.4 34 56-91 18-53 (331)
420 2eez_A Alanine dehydrogenase; 88.3 0.44 1.5E-05 45.2 4.8 32 58-91 167-198 (369)
421 1l7d_A Nicotinamide nucleotide 88.3 0.42 1.5E-05 45.5 4.7 34 57-92 172-205 (384)
422 4huj_A Uncharacterized protein 88.3 0.28 9.4E-06 42.7 3.1 32 58-91 24-56 (220)
423 3c24_A Putative oxidoreductase 88.2 0.61 2.1E-05 42.3 5.6 32 58-91 12-44 (286)
424 3dje_A Fructosyl amine: oxygen 88.2 0.56 1.9E-05 45.4 5.6 37 7-45 4-41 (438)
425 3h2s_A Putative NADH-flavin re 88.0 0.53 1.8E-05 40.7 4.8 31 59-91 2-33 (224)
426 3h8v_A Ubiquitin-like modifier 88.0 0.45 1.5E-05 43.2 4.4 35 56-91 35-69 (292)
427 1ez4_A Lactate dehydrogenase; 87.9 0.53 1.8E-05 43.5 4.9 36 56-91 4-39 (318)
428 3ktd_A Prephenate dehydrogenas 87.9 0.54 1.9E-05 43.8 5.1 34 57-92 8-41 (341)
429 2egg_A AROE, shikimate 5-dehyd 87.9 0.52 1.8E-05 43.1 4.9 33 57-91 141-174 (297)
430 3ew7_A LMO0794 protein; Q8Y8U8 87.8 0.55 1.9E-05 40.4 4.8 31 59-91 2-33 (221)
431 2izz_A Pyrroline-5-carboxylate 87.8 0.46 1.6E-05 44.0 4.5 33 57-91 22-58 (322)
432 3gpi_A NAD-dependent epimerase 87.8 0.55 1.9E-05 42.5 5.0 33 58-92 4-36 (286)
433 4gde_A UDP-galactopyranose mut 87.7 0.33 1.1E-05 48.2 3.7 39 8-47 9-47 (513)
434 3ojo_A CAP5O; rossmann fold, c 87.7 0.44 1.5E-05 45.9 4.4 33 58-92 12-44 (431)
435 3g79_A NDP-N-acetyl-D-galactos 87.6 0.53 1.8E-05 46.1 5.0 36 57-93 18-54 (478)
436 1zud_1 Adenylyltransferase THI 87.6 0.52 1.8E-05 41.9 4.6 33 57-91 28-61 (251)
437 1p77_A Shikimate 5-dehydrogena 87.6 0.43 1.5E-05 43.0 4.0 33 57-91 119-151 (272)
438 3dme_A Conserved exported prot 87.5 0.54 1.9E-05 44.1 5.0 35 8-44 3-37 (369)
439 3c7a_A Octopine dehydrogenase; 87.5 0.4 1.4E-05 46.0 4.1 30 58-89 3-33 (404)
440 2vhw_A Alanine dehydrogenase; 87.5 0.53 1.8E-05 44.7 4.8 33 57-91 168-200 (377)
441 2wtb_A MFP2, fatty acid multif 87.5 0.43 1.5E-05 49.5 4.5 33 58-92 313-345 (725)
442 2cul_A Glucose-inhibited divis 87.4 0.68 2.3E-05 40.5 5.2 34 8-43 2-35 (232)
443 3rp8_A Flavoprotein monooxygen 87.4 0.55 1.9E-05 45.0 5.0 36 7-44 21-56 (407)
444 2zyd_A 6-phosphogluconate dehy 87.3 0.51 1.7E-05 46.4 4.7 33 57-91 15-47 (480)
445 4gwg_A 6-phosphogluconate dehy 87.3 0.56 1.9E-05 46.0 4.9 34 57-92 4-37 (484)
446 3e8x_A Putative NAD-dependent 87.2 0.64 2.2E-05 40.6 5.0 34 57-92 21-55 (236)
447 2p4q_A 6-phosphogluconate dehy 87.2 0.57 2E-05 46.2 5.0 34 57-92 10-43 (497)
448 3b1f_A Putative prephenate deh 87.2 0.65 2.2E-05 42.2 5.1 34 58-91 7-40 (290)
449 2g5c_A Prephenate dehydrogenas 87.2 0.6 2E-05 42.2 4.9 31 59-91 3-35 (281)
450 1y56_B Sarcosine oxidase; dehy 87.2 0.63 2.2E-05 44.0 5.3 34 8-43 4-37 (382)
451 3fi9_A Malate dehydrogenase; s 87.2 0.58 2E-05 43.6 4.8 35 57-91 8-43 (343)
452 1x0v_A GPD-C, GPDH-C, glycerol 87.1 0.38 1.3E-05 45.2 3.6 33 58-92 9-48 (354)
453 2pv7_A T-protein [includes: ch 87.1 0.53 1.8E-05 43.1 4.4 33 58-92 22-55 (298)
454 3rui_A Ubiquitin-like modifier 87.1 0.62 2.1E-05 43.2 4.9 34 57-91 34-67 (340)
455 3i6d_A Protoporphyrinogen oxid 87.1 0.37 1.3E-05 47.1 3.6 39 8-46 4-46 (470)
456 1yj8_A Glycerol-3-phosphate de 87.1 0.43 1.5E-05 45.3 3.9 33 58-92 22-61 (375)
457 2xag_A Lysine-specific histone 87.0 0.61 2.1E-05 49.3 5.4 42 218-259 581-628 (852)
458 1vpd_A Tartronate semialdehyde 87.0 0.54 1.9E-05 42.9 4.5 32 58-91 6-37 (299)
459 4b4o_A Epimerase family protei 86.9 0.7 2.4E-05 42.0 5.2 33 58-92 1-34 (298)
460 4ffl_A PYLC; amino acid, biosy 86.9 0.64 2.2E-05 43.8 5.1 33 58-92 2-34 (363)
461 1pjq_A CYSG, siroheme synthase 86.8 0.58 2E-05 45.7 4.8 33 57-91 12-44 (457)
462 3dhn_A NAD-dependent epimerase 86.8 0.54 1.8E-05 40.8 4.2 33 58-92 5-38 (227)
463 2hk9_A Shikimate dehydrogenase 86.8 0.58 2E-05 42.2 4.5 32 58-91 130-161 (275)
464 2qcu_A Aerobic glycerol-3-phos 86.8 0.56 1.9E-05 46.5 4.8 35 8-44 2-36 (501)
465 2rcy_A Pyrroline carboxylate r 86.7 0.58 2E-05 41.8 4.4 33 58-92 5-41 (262)
466 3u62_A Shikimate dehydrogenase 86.7 0.66 2.2E-05 41.3 4.7 31 59-91 110-141 (253)
467 2bcg_G Secretory pathway GDP d 86.7 0.78 2.7E-05 44.8 5.7 38 7-46 9-46 (453)
468 2gf2_A Hibadh, 3-hydroxyisobut 86.7 0.55 1.9E-05 42.8 4.4 32 59-92 2-33 (296)
469 1pgj_A 6PGDH, 6-PGDH, 6-phosph 86.7 0.6 2E-05 45.9 4.8 32 58-91 2-33 (478)
470 1yvv_A Amine oxidase, flavin-c 86.6 0.71 2.4E-05 42.7 5.1 34 9-44 2-35 (336)
471 1edz_A 5,10-methylenetetrahydr 86.6 0.58 2E-05 43.0 4.3 34 56-91 176-210 (320)
472 3gt0_A Pyrroline-5-carboxylate 86.6 0.68 2.3E-05 40.9 4.8 32 58-91 3-38 (247)
473 3tnl_A Shikimate dehydrogenase 86.6 0.74 2.5E-05 42.3 5.1 33 57-91 154-187 (315)
474 1rp0_A ARA6, thiazole biosynth 86.4 0.6 2E-05 42.3 4.4 37 8-45 38-74 (284)
475 2aef_A Calcium-gated potassium 86.4 0.36 1.2E-05 42.4 2.8 33 57-92 9-41 (234)
476 3k7m_X 6-hydroxy-L-nicotine ox 86.3 0.52 1.8E-05 45.5 4.2 46 213-259 213-258 (431)
477 3don_A Shikimate dehydrogenase 86.3 0.54 1.8E-05 42.4 3.9 34 57-92 117-151 (277)
478 3jyo_A Quinate/shikimate dehyd 86.3 0.78 2.7E-05 41.5 5.0 33 57-91 127-160 (283)
479 2pgd_A 6-phosphogluconate dehy 86.3 0.64 2.2E-05 45.8 4.8 33 58-92 3-35 (482)
480 3o38_A Short chain dehydrogena 86.2 0.88 3E-05 40.6 5.4 33 57-91 22-56 (266)
481 2ahr_A Putative pyrroline carb 86.2 0.66 2.3E-05 41.3 4.5 32 58-91 4-35 (259)
482 3ond_A Adenosylhomocysteinase; 86.2 0.67 2.3E-05 45.2 4.7 33 57-91 265-297 (488)
483 1nvt_A Shikimate 5'-dehydrogen 86.1 0.64 2.2E-05 42.2 4.4 31 58-91 129-159 (287)
484 3v76_A Flavoprotein; structura 86.1 0.73 2.5E-05 44.4 5.0 35 8-44 26-60 (417)
485 3g3e_A D-amino-acid oxidase; F 86.1 0.68 2.3E-05 43.3 4.7 35 10-44 1-39 (351)
486 3fbt_A Chorismate mutase and s 86.1 0.77 2.6E-05 41.5 4.8 33 57-91 122-155 (282)
487 2e4g_A Tryptophan halogenase; 86.0 0.86 2.9E-05 45.7 5.7 37 8-44 24-61 (550)
488 1ryi_A Glycine oxidase; flavop 86.0 0.59 2E-05 44.2 4.3 36 7-44 15-50 (382)
489 2x0j_A Malate dehydrogenase; o 86.0 0.75 2.6E-05 41.8 4.7 33 59-91 2-34 (294)
490 2rir_A Dipicolinate synthase, 86.0 0.81 2.8E-05 41.9 5.1 34 56-91 156-189 (300)
491 3r6d_A NAD-dependent epimerase 85.9 1 3.5E-05 38.8 5.6 31 59-91 7-39 (221)
492 3da1_A Glycerol-3-phosphate de 85.9 0.78 2.7E-05 46.2 5.3 36 7-44 16-51 (561)
493 3pid_A UDP-glucose 6-dehydroge 85.9 0.76 2.6E-05 44.3 4.9 34 56-92 35-68 (432)
494 1y7t_A Malate dehydrogenase; N 85.9 0.61 2.1E-05 43.3 4.2 33 57-91 4-44 (327)
495 3cgv_A Geranylgeranyl reductas 85.8 0.42 1.4E-05 45.5 3.2 35 8-44 3-37 (397)
496 3tri_A Pyrroline-5-carboxylate 85.8 0.82 2.8E-05 41.3 4.9 33 58-92 4-39 (280)
497 3d4o_A Dipicolinate synthase s 85.7 0.86 2.9E-05 41.5 5.1 34 56-91 154-187 (293)
498 3d1l_A Putative NADP oxidoredu 85.7 0.72 2.5E-05 41.3 4.5 32 58-91 11-43 (266)
499 1wdk_A Fatty oxidation complex 85.6 0.52 1.8E-05 48.9 3.9 34 57-92 314-347 (715)
500 2qa1_A PGAE, polyketide oxygen 85.6 0.89 3.1E-05 45.0 5.5 40 4-45 6-45 (500)
No 1
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=100.00 E-value=9.6e-41 Score=325.38 Aligned_cols=345 Identities=26% Similarity=0.418 Sum_probs=278.9
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
.++||+|||||++|+++|++|+++ |.+|+||||++.+++++|+.+.|+++.+..+.......++...+.+.+.++.++
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~--G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAG--GHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAA 80 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999 999999999877899999999999999887777777778888899999999998
Q ss_pred cCCCCcccCeEEEEeCc-ChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNE-QLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEF 214 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 214 (473)
.++.+...+.+.+..+. +.+.+..........+++..++++.+++...+|.+...++++.+..+.+++..++..|.+.+
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 160 (369)
T 3dme_A 81 RGVPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDA 160 (369)
T ss_dssp HTCCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHHH
T ss_pred cCCCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHHHH
Confidence 88888889999988877 67777777888888888438999999999999988778899999999999999999999999
Q ss_pred HHcCcEEEeCceEEEEEEcCCe-EEEEcCCC--cEEEcCEEEEcCCcChHHHHHhc-CCCC--CCceeeeeeEEEEeCcC
Q psy7710 215 CELGGEIRLNQQVESFKENPES-VTISTKQG--DHLESSYALVCAGLQADEMALKS-GCSL--EPAIVPFRGEYLLLNPA 288 (473)
Q Consensus 215 ~~~Gv~i~~~~~V~~i~~~~~~-v~v~~~~g--~~i~ad~VV~aaG~~s~~l~~~~-g~~~--~~~~~p~~g~~~~~~~~ 288 (473)
+++|++|+++++|++|..++++ +.|++.+| .+++||.||+|+|.|+..|++++ |++. .+++.|.|||++.++.+
T Consensus 161 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~~~~~~~i~p~rG~~~~~~~~ 240 (369)
T 3dme_A 161 ESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEYLCKGSYFTLAGR 240 (369)
T ss_dssp HHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSCGGGSCCCEEEEEEEEECSSS
T ss_pred HHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCCccccceeeecceEEEEECCC
Confidence 9999999999999999988655 88888887 48999999999999999999999 8752 24789999999998764
Q ss_pred cccCcccccccCCCCCCCccEEEEecCCCCeEEECCCccccccccCcccccchhHHHhhhccCCcchhccchhhhhchHH
Q psy7710 289 KQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKE 368 (473)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (473)
. ...+.+|..|... ..++++.++.+|++++|++.++. ++++. ..++
T Consensus 241 ~--~~~~~~~~~p~~~--~~~~~~~~~~~g~~~iG~t~e~~---~~~~~-~~~~-------------------------- 286 (369)
T 3dme_A 241 A--PFSRLIYPVPQHA--GLGVHLTLDLGGQAKFGPDTEWI---ATEDY-TLDP-------------------------- 286 (369)
T ss_dssp C--SCSSEEEECTTCS--SCCCCEEECTTSCEEECCCCEEE---SSCCC-CCCG--------------------------
T ss_pred C--ccCceeecCCCCC--CceEEEeCccCCcEEECCCcccc---ccccc-ccCH--------------------------
Confidence 2 2344556555432 23567777788999999987641 11111 0011
Q ss_pred HHhhhcchhHHHHHhhcccCCCCCCcccCCCeeceEee---CCCCccc---------cccceeeeecCCccccchHHHHH
Q psy7710 369 MIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQAL---SSSGDLV---------DDFGVKAIHSPHTGIVDWGLVTR 436 (473)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~---t~d~~p~---------~g~~~~~g~~~~~gi~~~~~~a~ 436 (473)
..++.+++.+.+++|.|.+.++.+.|+|+||++. ++|+.|+ .|+|+++||+++ |+. .+|
T Consensus 287 ----~~~~~l~~~~~~~~P~l~~~~v~~~w~G~Rp~~~~~~~~d~~p~i~g~~~~~~~~l~~~~G~~~~-G~t----~ap 357 (369)
T 3dme_A 287 ----RRADVFYAAVRSYWPALPDGALAPGYTGIRPKISGPHEPAADFAIAGPASHGVAGLVNLYGIESP-GLT----ASL 357 (369)
T ss_dssp ----GGGGGHHHHHHTTCTTCCTTCCEEEEEEEEEESSCTTSCCCCCEEECHHHHCCTTEEEEECCCTT-HHH----HHH
T ss_pred ----HHHHHHHHHHHHHCCCCChhhceecceeccccccCCCCCcCCeEEecccccCCCCEEEEeCCCCc-hHh----ccH
Confidence 1134567999999999999999999999999853 2566664 378999998765 564 455
Q ss_pred HHHHHHHhh
Q psy7710 437 VMGEEFCEL 445 (473)
Q Consensus 437 ~~g~~~~~~ 445 (473)
.+|+.++++
T Consensus 358 ~~a~~~a~~ 366 (369)
T 3dme_A 358 AIAEETLAR 366 (369)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555543
No 2
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=100.00 E-value=1e-39 Score=319.54 Aligned_cols=352 Identities=16% Similarity=0.159 Sum_probs=265.5
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
.++||+|||||++|+++|++|+ + |.+|+|||+++.+++++|+.+.|+++..+. ......+...+.+.|.++.++
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~--G~~V~vlE~~~~~g~~as~~~~g~~~~~~~---~~~~~~l~~~~~~~~~~~~~~ 81 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A--HGRVVVLEREAQPGYHSTGRSAAHYTVAYG---TPQVRALTAASRAFFDNPPAG 81 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T--TSCEEEECSSSSTTSSGGGSCCCEECSSSS---CHHHHHHHHHHHHHHHSCCTT
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C--CCCEEEEECCCCccccccccccceeecccC---CHHHHHHHHHHHHHHHHhhhh
Confidence 4689999999999999999999 7 899999999877898999999999877532 223456667777777766555
Q ss_pred cC-CC-CcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCccc---ceeEecCCccceeHHHHHHHH
Q psy7710 136 RN-IP-YKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKG---VKAIHSPNTGIVDWGLVTRVM 210 (473)
Q Consensus 136 ~~-~~-~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~l 210 (473)
+. .. +...|.+.+...++.+.+....+.+...++ ..++++.+++...+|.+.. .++++.+.++.++|..++..|
T Consensus 82 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (381)
T 3nyc_A 82 FCEHPLLSPRPEMVVDFSDDPEELRRQYESGKALVP-QMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGY 160 (381)
T ss_dssp SCSSCSEEECCEEEECSSCCHHHHHHHHHHHHHHCT-TCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHH
T ss_pred hCCcccccccceEEEechHHHHHHHHHHHHHHHcCC-CcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHH
Confidence 43 22 567788887765566677777777788888 7899999999999987764 478999999999999999999
Q ss_pred HHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeeeeEEEEeCcCcc
Q psy7710 211 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQ 290 (473)
Q Consensus 211 ~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~g~~~~~~~~~~ 290 (473)
.+.++++|++|+++++|++|..+++++.|++.+| +++||.||+|+|+|+..|++.+|+. ..++.|.|||++.++.+..
T Consensus 161 ~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~-~~~~~p~rg~~~~~~~~~~ 238 (381)
T 3nyc_A 161 LRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR-PLGLQPKRRSAFIFAPPPG 238 (381)
T ss_dssp HHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC-CCCCEEEEEEEEEECCCTT
T ss_pred HHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC-CCceeeeEEEEEEECCCcC
Confidence 9999999999999999999999888899999988 8999999999999999999999876 2479999999999876532
Q ss_pred cCcccccccCCCCCCCccEEEEecCCCCeEEECCCccccccccCcccccchhHHHhhhccCCcchhccchhhhhchHHHH
Q psy7710 291 HLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKEMI 370 (473)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (473)
..... ++.. .....++|++|.. |++++|++.+.... ..+. .++ ...
T Consensus 239 ~~~~~--~p~~--~~~~~~~y~~p~~-g~~~ig~~~~~~~~--~~~~---~~~-------------------~~~----- 284 (381)
T 3nyc_A 239 IDCHD--WPML--VSLDESFYLKPDA-GMLLGSPANADPVE--AHDV---QPE-------------------QLD----- 284 (381)
T ss_dssp CCCTT--CCEE--EETTSSCEEEEET-TEEEEECCCCEECC--SSCC---CCC-------------------HHH-----
T ss_pred CCcCc--cceE--EeCCCCEEEEeCC-CcEEEeCCcCCCCC--cccC---CCC-------------------hHH-----
Confidence 11111 0100 0011257999987 89999988653211 1110 110 000
Q ss_pred hhhcchhHHHHHhhcccCCCCCCcccCCCeeceEeeCCCCccc-------cccceeeeecCCccccchHHHHHHHHHHHH
Q psy7710 371 MSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLV-------DDFGVKAIHSPHTGIVDWGLVTRVMGEEFC 443 (473)
Q Consensus 371 ~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~t~d~~p~-------~g~~~~~g~~~~~gi~~~~~~a~~~g~~~~ 443 (473)
.+.+++.+.+ +|.+.+.++.+.|+|+||+ |+|+.|+ .|+|+++||++| |+..++.+|..++++|.
T Consensus 285 ----~~~~~~~~~~-~~~l~~~~~~~~w~G~r~~--t~D~~p~ig~~~~~~~l~~a~G~~g~-G~~~ap~~g~~la~~i~ 356 (381)
T 3nyc_A 285 ----IATGMYLIEE-ATTLTIRRPEHTWAGLRSF--VADGDLVAGYAANAEGFFWVAAQGGY-GIQTSAAMGEASAALIR 356 (381)
T ss_dssp ----HHHHHHHHHH-HBSCCCCCCSEEEEEEEEE--CTTSCCEEEECTTSTTEEEEECCTTC-TTTTHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHh-cCCCcccceeeeeEEcccc--CCCCCceecCCCCCCCeEEEEcCCCh-hHhhCHHHHHHHHHHHh
Confidence 1233455555 6888888999999999988 8999986 478999998875 67666666666666665
Q ss_pred hhCCe-------Eecc-cceeec
Q psy7710 444 ELGGE-------IRLN-QQVESF 458 (473)
Q Consensus 444 ~~~~~-------~~~~-~~~~~~ 458 (473)
....+ +++. +..+||
T Consensus 357 g~~~~~~~~~~~~d~~~~~~~Rf 379 (381)
T 3nyc_A 357 HQPLPAHLREHGLDEAMLSPRRL 379 (381)
T ss_dssp TCCCCHHHHTTTCCHHHHCGGGG
T ss_pred CCCCCcccccccCcccccCcccc
Confidence 54444 2332 666666
No 3
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.9e-38 Score=309.45 Aligned_cols=353 Identities=18% Similarity=0.238 Sum_probs=273.6
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
.++||+|||||++|+++|++|+++ |.+|+|||+. .+++++|+.+.|.++.... ......+...+.+.|.++.++
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~--G~~V~lle~~-~~~~gas~~~~g~~~~~~~---~~~~~~l~~~~~~~~~~l~~~ 77 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKR--GEEVTVIEKR-FIGSGSTFRCGTGIRQQFN---DEANVRVMKRSVELWKKYSEE 77 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSS-STTCSHHHHCCCCCCCCCS---SHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCC-CCCCCccccccCeeeecCC---ChHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999999 9999999998 7888899999888876532 122345677788888888887
Q ss_pred cCCCCcccCeEEEEeCc-ChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcc---cceeEecCCccceeHHHHHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNE-QLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCK---GVKAIHSPNTGIVDWGLVTRVMG 211 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~l~ 211 (473)
.+..+...|.+.+..++ ..+.+....+.+...|+ ..++++.+++...+|.+. ..++++.+.++.++|..++..|.
T Consensus 78 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 156 (382)
T 1y56_B 78 YGFSFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGV-PTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFA 156 (382)
T ss_dssp HTCCEECCCEEEEECSHHHHHHHHHHHHHHHHTTC-CCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHH
T ss_pred hCCCeeccceEEEEeCHHHHHHHHHHHHHHHhcCC-CcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHH
Confidence 77677788888888777 67777777777888888 789999999998888765 25788999999999999999999
Q ss_pred HHHHHcCcEEEeCceEEEEEEcCCeEE-EEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeeeeEEEEeCcCcc
Q psy7710 212 EEFCELGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQ 290 (473)
Q Consensus 212 ~~~~~~Gv~i~~~~~V~~i~~~~~~v~-v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~g~~~~~~~~~~ 290 (473)
+.+++.|++|+++++|++|..+++.+. |++.+| +++||.||+|+|.|+..+.+.+|+....++.|.+||++.+++...
T Consensus 157 ~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~~~~~g~~~~~~~~~~ 235 (382)
T 1y56_B 157 VKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKTKIPIEPYKHQAVITQPIKR 235 (382)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCSCCCCEEEEEEEEEECCCST
T ss_pred HHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCcCcCCCeeEeEEEEEccCCc
Confidence 999999999999999999998888777 888888 899999999999999889998887511478999999999876432
Q ss_pred cCcc-cccccCCCCCCCccEEEEecCCCCeEEECC-CccccccccCcccccchhHHHhhhccCCcchhccchhhhhchHH
Q psy7710 291 HLVR-GNIYPVPDPNFPFLGVHFTPRMDGSVWLGP-NAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKE 368 (473)
Q Consensus 291 ~~~~-~~~~~~~~~~~~~~~~~~~p~~~g~~~iG~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (473)
. .. ..++.. . ..++|++|..+| +++|+ +... ..+++. ..+.
T Consensus 236 ~-~~~~~~~~~---~--~~~~y~~p~~~g-~~iG~~~~~~---~~~~~~-~~~~-------------------------- 278 (382)
T 1y56_B 236 G-TINPMVISF---K--YGHAYLTQTFHG-GIIGGIGYEI---GPTYDL-TPTY-------------------------- 278 (382)
T ss_dssp T-SSCSEEEES---T--TTTEEEECCSSS-CCEEECSCCB---SSCCCC-CCCH--------------------------
T ss_pred c-cCCCeEEec---C--CCeEEEEEeCCe-EEEecCCCCC---CCCCCC-CCCH--------------------------
Confidence 1 11 111111 0 125899999888 88884 3211 111111 0010
Q ss_pred HHhhhcchhHHHHHhhcccCCCCCCcccCCCeeceEeeCCCCccc-------cccceeeeecCCccccchHHHHHHHHHH
Q psy7710 369 MIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLV-------DDFGVKAIHSPHTGIVDWGLVTRVMGEE 441 (473)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~t~d~~p~-------~g~~~~~g~~~~~gi~~~~~~a~~~g~~ 441 (473)
...+.+++.+.+++|.+.+.++.+.|+|+||+ |+|+.|+ .|+|+++||++| |+..++.+|..++++
T Consensus 279 ----~~~~~l~~~~~~~~p~l~~~~~~~~~~g~r~~--t~d~~p~ig~~~~~~~~~~~~G~~g~-G~~~a~~~g~~la~~ 351 (382)
T 1y56_B 279 ----EFLREVSYYFTKIIPALKNLLILRTWAGYYAK--TPDSNPAIGRIEELNDYYIAAGFSGH-GFMMAPAVGEMVAEL 351 (382)
T ss_dssp ----HHHHHHHHHHHHHCGGGGGSEEEEEEEEEEEE--CTTSCCEEEEESSSBTEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHhCCCcCCCCceEEEEecccc--CCCCCcEeccCCCCCCEEEEEecCcc-hHhhhHHHHHHHHHH
Confidence 01345568899999999999999999999988 7999986 478999998875 676666667777777
Q ss_pred HHhhCCeEec-ccceeeccc
Q psy7710 442 FCELGGEIRL-NQQVESFKE 460 (473)
Q Consensus 442 ~~~~~~~~~~-~~~~~~~~~ 460 (473)
+.......++ .++.+||..
T Consensus 352 i~~~~~~~~~~~~~~~Rf~~ 371 (382)
T 1y56_B 352 ITKGKTKLPVEWYDPYRFER 371 (382)
T ss_dssp HHHSSCSSCGGGGCGGGTTT
T ss_pred HhCCCCcCcccccCHhhhcc
Confidence 6655444433 377788863
No 4
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=100.00 E-value=4.4e-37 Score=301.80 Aligned_cols=364 Identities=18% Similarity=0.203 Sum_probs=268.5
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccC--cccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHH
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGM--HQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFD 134 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~--~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (473)
++||+|||||++|+++|++|+++ |.+|+|||++ ..++ ++|..+.++++..+ ........+...+.+.|.++.+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~--G~~V~vie~~-~~~~~~g~s~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~l~~ 77 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ--GVKTLLVDAF-DPPHTNGSHHGDTRIIRHAY--GEGREYVPLALRSQELWYELEK 77 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSS-CSSCSSSSSCSSEEEECSSC--TTCGGGHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCC-CCCCCCCCCCCcchhhhhhh--cCCchHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999 9999999998 5666 77777877776543 2222345677788888888888
Q ss_pred hcCCC-CcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcc---cceeEecCCccceeHHHHHHHH
Q psy7710 135 KRNIP-YKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCK---GVKAIHSPNTGIVDWGLVTRVM 210 (473)
Q Consensus 135 ~~~~~-~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~l 210 (473)
+.+.+ +...|.+.+...++.+.+....+.+...|+ ..++++.+++.+.+|.+. ..++++.+.++.++|..++..|
T Consensus 78 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l 156 (389)
T 2gf3_A 78 ETHHKIFTKTGVLVFGPKGESAFVAETMEAAKEHSL-TVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAY 156 (389)
T ss_dssp HCSSCCEECCCEEEEEETTCCHHHHHHHHHHHHTTC-CCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHH
T ss_pred HhCCcceeecceEEEcCCCchHHHHHHHHHHHHcCC-CcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHH
Confidence 77754 567788887765333345556666777888 688999999988888654 2578899999999999999999
Q ss_pred HHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeeeeEEEEeCcCcc
Q psy7710 211 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQ 290 (473)
Q Consensus 211 ~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~g~~~~~~~~~~ 290 (473)
.+.+++.|++++++++|++|..+++++.|++.+| +++||.||+|+|.|+..+++.+|+. .++.|.+||++.+++...
T Consensus 157 ~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g~~--~pl~~~rg~~~~~~~~~~ 233 (389)
T 2gf3_A 157 RELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLNLD--IPLQPYRQVVGFFESDES 233 (389)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGTEE--CCCEEEEEEEEEECCCHH
T ss_pred HHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhccC--CceEEEEEEEEEEecCcc
Confidence 9999999999999999999998877888888887 8999999999999999998888754 378999999999986531
Q ss_pred cCcccccccCCCCCCCccEEEEecCCCC-eEEECCCcccc-ccccCcccccchhHHHhhhccCCcchhccchhhhhchHH
Q psy7710 291 HLVRGNIYPVPDPNFPFLGVHFTPRMDG-SVWLGPNAVLA-FKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKE 368 (473)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~p~~~g-~~~iG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (473)
.......++......+...+|++|..+| ++++|++.... ..+++.+. .+. .+...
T Consensus 234 ~~~~~~~~p~~~~~~~~~~~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~---~~~-----------------~~~~~--- 290 (389)
T 2gf3_A 234 KYSNDIDFPGFMVEVPNGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINR---EFG-----------------VYPED--- 290 (389)
T ss_dssp HHBGGGTCCEEEEEETTEEEEEECBSTTCCEEEEESSCCEECCTTTCCC---CTT-----------------SSHHH---
T ss_pred cccccccCCEEEEeCCCCcEEEcCCCCCCcEEEEEcCCCCccCcccccC---ccC-----------------CCHHH---
Confidence 1000000010000000125799999888 89999764211 01111100 000 00001
Q ss_pred HHhhhcchhHHHHHhhcccCCCCCCcccCCCeeceEeeCCCCccc-------cccceeeeecCCccccchHHHHHHHHHH
Q psy7710 369 MIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLV-------DDFGVKAIHSPHTGIVDWGLVTRVMGEE 441 (473)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~t~d~~p~-------~g~~~~~g~~~~~gi~~~~~~a~~~g~~ 441 (473)
.+.+++.+.++||.+.+ ++.+.|+|+||+ |+|+.|+ .|+|+++||++| |+..++.+|..++++
T Consensus 291 ------~~~l~~~~~~~~P~l~~-~~~~~w~g~r~~--t~D~~p~ig~~~~~~~l~~a~G~~g~-G~~~ap~~g~~la~~ 360 (389)
T 2gf3_A 291 ------ESNLRAFLEEYMPGANG-ELKRGAVCMYTK--TLDEHFIIDLHPEHSNVVIAAGFSGH-GFKFSSGVGEVLSQL 360 (389)
T ss_dssp ------HHHHHHHHHHHCGGGCS-CEEEEEEEEEEE--CTTSCCEEEEETTEEEEEEEECCTTC-CGGGHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHhCCCCCC-CceEEEEEEecc--CCCCCeEEccCCCCCCEEEEECCccc-cccccHHHHHHHHHH
Confidence 24556899999999987 899999999987 8999986 477999999876 676777777777777
Q ss_pred HHhhCCeEec-ccceeecccCc
Q psy7710 442 FCELGGEIRL-NQQVESFKENP 462 (473)
Q Consensus 442 ~~~~~~~~~~-~~~~~~~~~~~ 462 (473)
+.....+.++ .++.+||....
T Consensus 361 i~~~~~~~~~~~~~~~Rf~~~~ 382 (389)
T 2gf3_A 361 ALTGKTEHDISIFSINRPALKE 382 (389)
T ss_dssp HHHSCCSSCCGGGCTTCGGGTC
T ss_pred HcCCCCCCCccccccccccccc
Confidence 7766555554 48888886443
No 5
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=100.00 E-value=5.1e-36 Score=295.84 Aligned_cols=351 Identities=16% Similarity=0.179 Sum_probs=273.9
Q ss_pred CCcccEEEEcCChHHHHHHHHHHh-cCCC-CeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHH
Q psy7710 55 PALYDVVVVGGGIVGVATARELKL-NYPK-MKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEY 132 (473)
Q Consensus 55 ~~~~dVvIIGaGi~Gl~~A~~L~~-~~~G-~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (473)
+.++||+|||||++|+++|++|++ + | .+|+|||++. +++++|+.+.|.++..... .....+...+.+.|.++
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~--G~~~V~vlE~~~-~~~gas~~~~g~~~~~~~~---~~~~~l~~~~~~~~~~~ 92 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNH--GITNVAVLEKGW-LAGGNMARNTTIIRSNYLW---DESAGIYEKSLKLWEQL 92 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHH--CCCCEEEECSSS-TTCSGGGTSCCCBCCCCSS---HHHHHHHHHHHHHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhc--CCCcEEEEeCCC-CCCCcccccCceeeecCCC---HHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999 9 8 9999999994 8889999999988765422 22345667788888888
Q ss_pred HHhcCCC--CcccCeEEEEeCc-ChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcc--------cceeEecCCccce
Q psy7710 133 FDKRNIP--YKKCGKLIVALNE-QLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCK--------GVKAIHSPNTGIV 201 (473)
Q Consensus 133 ~~~~~~~--~~~~g~l~~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~--------~~~~~~~~~~~~~ 201 (473)
.++.+++ +...|.+.+...+ ..+.+....+.+...|. ..++++.+++...+|.+. ..++++.+.++.+
T Consensus 93 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 171 (405)
T 2gag_B 93 PEDLEYDFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGV-DAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIA 171 (405)
T ss_dssp HHHTTCCCCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTC-CCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBC
T ss_pred HHHhCCCcCEecccEEEEEcCHHHHHHHHHHHHHHHhcCC-CceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccC
Confidence 8877754 6788999888877 67777777888888888 789999999988888653 2678999999999
Q ss_pred eHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCe-EEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeeee
Q psy7710 202 DWGLVTRVMGEEFCELGGEIRLNQQVESFKENPES-VTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRG 280 (473)
Q Consensus 202 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~g 280 (473)
+|..++..|.+.+++.|++++++++|++|..+++. +.|++.+| +++||.||+|+|.|+..+.+.+|+.. ++.|.++
T Consensus 172 ~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~--~~~~~~~ 248 (405)
T 2gag_B 172 KHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFEL--PIQSHPL 248 (405)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCC--CEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCC--Cccccce
Confidence 99999999999999999999999999999987665 56888888 89999999999999988999998764 8899999
Q ss_pred EEEEeCcCcccCcccccccCCCCCCCccEEEEecCCCCeEEECCCccccccccCcccccchhHHHhhhccCCcchhccch
Q psy7710 281 EYLLLNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLK 360 (473)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (473)
|++.+++.... ....++. . ..++|++|..+|++++|++.+.. .+++.. .+.
T Consensus 249 ~~~~~~~~~~~-~~~~~~~---~---~~~~y~~p~~~g~~~ig~~~~~~---~~~~~~-~~~------------------ 299 (405)
T 2gag_B 249 QALVSELFEPV-HPTVVMS---N---HIHVYVSQAHKGELVMGAGIDSY---NGYGQR-GAF------------------ 299 (405)
T ss_dssp EEEEEEEBCSC-CCSEEEE---T---TTTEEEEECTTSEEEEEEEECSS---CCCSSC-CCT------------------
T ss_pred eEEEecCCccc-cCceEEe---C---CCcEEEEEcCCCcEEEEeccCCC---CccccC-CCH------------------
Confidence 99988643211 1111111 0 12579999888999999875421 111100 000
Q ss_pred hhhhchHHHHhhhcchhHHHHHhhcccCCCCCCcccCCCeeceEeeCCCCcccc------ccceeeeecCCccccchHHH
Q psy7710 361 YTRYGSKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVD------DFGVKAIHSPHTGIVDWGLV 434 (473)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~t~d~~p~~------g~~~~~g~~~~~gi~~~~~~ 434 (473)
...+.+++.+.+++|.+.+.++.+.|+|+||+ ++|+.|++ |+|+++|++++ |+..++.+
T Consensus 300 ------------~~~~~l~~~~~~~~p~l~~~~~~~~w~g~~~~--t~d~~p~ig~~~~~~l~~~~G~~g~-G~~~a~~~ 364 (405)
T 2gag_B 300 ------------HVIQEQMAAAVELFPIFARAHVLRTWGGIVDT--TMDASPIISKTPIQNLYVNCGWGTG-GFKGTPGA 364 (405)
T ss_dssp ------------HHHHHHHHHHHHHCGGGGGCEECEEEEEEEEE--ETTSCCEEEECSSBTEEEEECCGGG-CSTTHHHH
T ss_pred ------------HHHHHHHHHHHHhCCccccCCcceEEeecccc--CCCCCCEecccCCCCEEEEecCCCc-hhhHHHHH
Confidence 01245568899999999988999999999988 79998863 68899998865 67777778
Q ss_pred HHHHHHHHHhhCCeEe-cccceeecc
Q psy7710 435 TRVMGEEFCELGGEIR-LNQQVESFK 459 (473)
Q Consensus 435 a~~~g~~~~~~~~~~~-~~~~~~~~~ 459 (473)
|..+++++.......+ ..++.+||+
T Consensus 365 g~~la~~i~g~~~~~~~~~~~~~R~~ 390 (405)
T 2gag_B 365 GFTLAHTIANDEPHELNKPFSLERFE 390 (405)
T ss_dssp HHHHHHHHHHTSCCTTTTTSCSTHHH
T ss_pred HHHHHHHHhCCCCCccccccCcchhc
Confidence 8888888776544443 337888886
No 6
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=100.00 E-value=9e-37 Score=298.82 Aligned_cols=346 Identities=19% Similarity=0.202 Sum_probs=260.8
Q ss_pred CCcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHH
Q psy7710 55 PALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFD 134 (473)
Q Consensus 55 ~~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (473)
+.++||+|||||++|+++|++|+++ |.+|+|||+. .+++++|+.+.|++.+...+........+...+.+.|.++.+
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~--G~~V~llE~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 91 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKE--NKNTALFESG-TMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGE 91 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSS-STTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC--CCcEEEEeCC-CCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999 9999999998 688888999999988766543333456677777777766554
Q ss_pred hc----CC--CCcccCeEEEEeCc-ChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCccc--ceeEecCCccceeHHH
Q psy7710 135 KR----NI--PYKKCGKLIVALNE-QLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKG--VKAIHSPNTGIVDWGL 205 (473)
Q Consensus 135 ~~----~~--~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~ 205 (473)
.+ ++ .+...|.+.+..++ +.+.+....+ . . ..++++.+++...+|.+.. .++++.+.++.++|..
T Consensus 92 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~----~-~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 165 (382)
T 1ryi_A 92 ELYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDD----L-D-SVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYF 165 (382)
T ss_dssp HHHHHHCCCCCCBCCCEEEEESSHHHHHHHHTTTT----S-T-TEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHH
T ss_pred HHHHhhCCCcCeeecceEEEEeCHHHHHHHHHHhh----c-C-CeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHH
Confidence 43 43 46778888877665 3333322211 1 2 6788999999888887543 5788999999999999
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeeeeEEEEe
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLL 285 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~g~~~~~ 285 (473)
+...|.+.+++.|++++++++|++|..+++++.|++.+| +++||.||+|+|.|+..+++.+|+. .++.|.+|+++.+
T Consensus 166 ~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~--~~~~~~~g~~~~~ 242 (382)
T 1ryi_A 166 VCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLN--NAFLPVKGECLSV 242 (382)
T ss_dssp HHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCC--CCCEEEEEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCC--CceeccceEEEEE
Confidence 999999999999999999999999998887788888888 8999999999999998899988875 4789999999988
Q ss_pred CcCcccCcccccccCCCCCCCccEEEEecCCCCeEEECCCccccccccCcccccchhHHHhhhccCCcchhccchhhhhc
Q psy7710 286 NPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYG 365 (473)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (473)
++.... ....++. .+.|++|..+|++++|++.+.. +++.. .+.
T Consensus 243 ~~~~~~-~~~~~~~--------~~~~~~p~~~g~~~vG~~~~~~----~~~~~-~~~----------------------- 285 (382)
T 1ryi_A 243 WNDDIP-LTKTLYH--------DHCYIVPRKSGRLVVGATMKPG----DWSET-PDL----------------------- 285 (382)
T ss_dssp ECCSSC-CCSEEEE--------TTEEEEECTTSEEEEECCCEET----CCCCS-CCH-----------------------
T ss_pred CCCCCC-ccceEEc--------CCEEEEEcCCCeEEEeeccccc----CCCCC-CCH-----------------------
Confidence 655321 1111111 2479999988999999985432 11110 000
Q ss_pred hHHHHhhhcchhHHHHHhhcccCCCCCCcccCCCeeceEeeCCCCcccc-------ccceeeeecCCccccchHHHHHHH
Q psy7710 366 SKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLVD-------DFGVKAIHSPHTGIVDWGLVTRVM 438 (473)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~t~d~~p~~-------g~~~~~g~~~~~gi~~~~~~a~~~ 438 (473)
+..+.+++.+.+++|.+...++.+.|+|+||+ ++|+.|+. |+|+++|++++ |+..++.+|..+
T Consensus 286 -------~~~~~l~~~~~~~~p~l~~~~~~~~w~g~~~~--t~d~~p~ig~~~~~~~l~~~~G~~g~-G~~~a~~~g~~l 355 (382)
T 1ryi_A 286 -------GGLESVMKKAKTMLPAIQNMKVDRFWAGLRPG--TKDGKPYIGRHPEDSRILFAAGHFRN-GILLAPATGALI 355 (382)
T ss_dssp -------HHHHHHHHHHHHHCGGGGGSEEEEEEEEEEEE--CSSSCCEEEEETTEEEEEEEECCSSC-TTTTHHHHHHHH
T ss_pred -------HHHHHHHHHHHHhCCCcCCCceeeEEEEeccc--CCCCCcEeccCCCcCCEEEEEcCCcc-hHHHhHHHHHHH
Confidence 01245568999999999988999999999988 79999873 57889998775 676666666666
Q ss_pred HHHHHhhCCeEec--ccceeecc
Q psy7710 439 GEEFCELGGEIRL--NQQVESFK 459 (473)
Q Consensus 439 g~~~~~~~~~~~~--~~~~~~~~ 459 (473)
+++|.....+.++ .+..+||.
T Consensus 356 a~~i~~~~~~~~~~~~~~~~Rf~ 378 (382)
T 1ryi_A 356 SDLIMNKEVNQDWLHAFRIDRKE 378 (382)
T ss_dssp HHHHTTCCCCHHHHHHTCSCCC-
T ss_pred HHHHhCCCCCchhhcCCChhhcc
Confidence 6666655444443 36777775
No 7
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=100.00 E-value=6.1e-35 Score=284.79 Aligned_cols=353 Identities=16% Similarity=0.176 Sum_probs=248.4
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccC-cccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGM-HQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~-~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
++||+|||||++|+++|++|+++ |.+|+|||+....++ +++..+.+++...+ ........+...+.+.|.++. +
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~--G~~V~vle~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~l~-~ 76 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA--GLNVLMTDAHMPPHQHGSHHGDTRLIRHAY--GEGEKYVPLVLRAQMLWDELS-R 76 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT--TCCEEEECSSCSSSSSSSCCSSEEEECSSC--TTCGGGHHHHHHHHHHHHHHH-T
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCCCCCCCCCCccceeeecc--CCCchHHHHHHHHHHHHHHHH-H
Confidence 47999999999999999999999 999999999843322 23333444444322 222234567778888888887 6
Q ss_pred cCC---CCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcc---cceeEecCCccceeHHHHHHH
Q psy7710 136 RNI---PYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCK---GVKAIHSPNTGIVDWGLVTRV 209 (473)
Q Consensus 136 ~~~---~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~ 209 (473)
.++ .+...|.+.+...+ .+.+....+.+...|+ ..++++.+++...+|.+. ..++++.+.+++++|..++..
T Consensus 77 ~~~~~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~ 154 (372)
T 2uzz_A 77 HNEDDPIFVRSGVINLGPAD-STFLANVAHSAEQWQL-NVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKT 154 (372)
T ss_dssp TCSSSCSEECCCEEEEEETT-CHHHHHHHHHHHHTTC-CEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHH
T ss_pred hCCCccceeeeceEEEeCCC-cHHHHHHHHHHHHcCC-CcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHH
Confidence 665 35678888777654 2345556666777888 789999999998888643 267899999999999999999
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeeeeEEEEeCcCc
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAK 289 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~g~~~~~~~~~ 289 (473)
|.+.+++.|++++++++|++|..+++++.|++.+| +++||.||+|+|.|+..|++ +.++.|+|||++.+..+.
T Consensus 155 l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~------~l~~~p~rg~~~~~~~~~ 227 (372)
T 2uzz_A 155 WIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVKDLLP------ELPVQPVRKVFAWYQADG 227 (372)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGGGTST------TCCCEEEECCEEEECCCG
T ss_pred HHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHHhhcc------ccCceEEEEEEEEEEecc
Confidence 99999999999999999999998877788999888 79999999999999977764 237899999998887643
Q ss_pred ccCcccccccCCCCCCC-ccEEEEecCCCCeEEECCCcccc-ccccCcccccchhHHHhhhccCCcchhccchhhhhchH
Q psy7710 290 QHLVRGNIYPVPDPNFP-FLGVHFTPRMDGSVWLGPNAVLA-FKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSK 367 (473)
Q Consensus 290 ~~~~~~~~~~~~~~~~~-~~~~~~~p~~~g~~~iG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (473)
...... ..+......+ ...+|++|+.++.+++|++..-. .+... +..+.++ +
T Consensus 228 ~~~~~~-~~p~~~~~~~~~~~~y~~p~~~~~~~iG~~~~g~~~~~~~-~~~~~~~-------------------~----- 281 (372)
T 2uzz_A 228 RYSVKN-KFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSAD-ERVPFAE-------------------V----- 281 (372)
T ss_dssp GGSTTT-TCCEEEEECTTCCEEEEECCSSSCEEEEESSCCEECCSGG-GCCCTTT-------------------S-----
T ss_pred ccCccc-cCCEEEEecCCCCeEEecCCCCCeEEEEecCCCCccCChh-hccCCCC-------------------C-----
Confidence 211000 0010000000 12578889888899999864210 00000 0000000 0
Q ss_pred HHHhhhcchhHHHHHhhcccCCCCCCcccCCCeeceEeeCCCCccc-------cccceeeeecCCccccchHHHHHHHHH
Q psy7710 368 EMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLV-------DDFGVKAIHSPHTGIVDWGLVTRVMGE 440 (473)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~t~d~~p~-------~g~~~~~g~~~~~gi~~~~~~a~~~g~ 440 (473)
....+.+++.+.++||.+. ++...|+|+||+ |+|+.|+ .|+|+++||++| |+..++.+|..+++
T Consensus 282 ----~~~~~~l~~~~~~~~P~l~--~~~~~~~g~r~~--t~d~~p~ig~~~~~~~l~~~~G~~g~-G~~~ap~~g~~la~ 352 (372)
T 2uzz_A 282 ----VSDGSEAFPFLRNVLPGIG--CCLYGAACTYDN--SPDEDFIIDTLPGHDNTLLITGLSGH-GFKFASVLGEIAAD 352 (372)
T ss_dssp ----TTGGGSSHHHHHHHSCSCC--CEEEECCCEEEE--CTTSCCCEEEETTEEEEEEECCCCSC-CGGGHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHCCCCC--ccceeeEEeecc--CCCCCeEEecCCCCCCEEEEeCCCcc-chhccHHHHHHHHH
Confidence 0113455689999999987 788999999987 8999987 378999999876 57655566666666
Q ss_pred HHHhhCCeEe-cccceeec
Q psy7710 441 EFCELGGEIR-LNQQVESF 458 (473)
Q Consensus 441 ~~~~~~~~~~-~~~~~~~~ 458 (473)
+|.....+++ ..+..+||
T Consensus 353 ~i~~~~~~~~~~~~~~~Rf 371 (372)
T 2uzz_A 353 FAQDKKSDFDLTPFRLSRF 371 (372)
T ss_dssp HHTTCCCSSCCGGGCSTTC
T ss_pred HHhCCCCCCCccccCcCCC
Confidence 6554444444 33666665
No 8
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=100.00 E-value=6.3e-36 Score=298.95 Aligned_cols=361 Identities=16% Similarity=0.153 Sum_probs=256.7
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCC-CeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPK-MKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFD 134 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G-~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (473)
.++||+|||||++|+++|++|+++ | .+|+|||+...++.++|+.+.|+++.... ......+...+.+.|.++.+
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~--G~~~V~vlE~~~~~~~g~S~~~~g~i~~~~~---~~~~~~l~~~~~~~~~~l~~ 96 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVW--SGGSVLVVDAGHAPGSGDSGRSMAAFRTFFS---STMNRLVAGSTVRLFEDAQR 96 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH--HCSCEEEEESSSSTTCSGGGSSCCEEECCCS---SHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC--CCCcEEEEccCCCCCCCcccCCCcEecccCC---CHHHHHHHHHHHHHHHHHHh
Confidence 468999999999999999999999 8 89999999447888999999999887532 22345677788888888877
Q ss_pred hcCC--CCcccCeEEEEeCc-ChhhHHHHHHHHHhCCCCcc-----eee-----------CHHHHHhhcCCcccceeEec
Q psy7710 135 KRNI--PYKKCGKLIVALNE-QLEPLHDLYERSIQNNVKDV-----RLV-----------SAEEIKTIEPYCKGVKAIHS 195 (473)
Q Consensus 135 ~~~~--~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~g~~~~-----~~l-----------~~~~~~~~~p~~~~~~~~~~ 195 (473)
. ++ .+...|.+. ..+. ..+.+....+.+...|. .. +++ +.+++.. .......++++.
T Consensus 97 ~-g~~~~~~~~g~l~-~~~~~~~~~~~~~~~~~~~~g~-~~~p~~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~ 172 (448)
T 3axb_A 97 G-GEDLGLVKSGYLF-VYDRERWREVEEPLREAGEEGR-DYLIIPPEELERRLGMNTRVSDGEEAEV-LGVGDVEGAVLI 172 (448)
T ss_dssp T-TCCCCCBCCCEEE-EECHHHHHHHHHHHTTSCCBTT-TEEEECHHHHHHHHCCCCCCTTSSHHHH-HTCCCCCEEEEE
T ss_pred c-CcccccccCCEEE-EcCHHHHHHHHHHHHHHHhhCC-CccccchhhhhhcccccccCCCHHHHHh-ccCCCceEEEEe
Confidence 6 53 467778887 5554 44444444444444555 44 556 6666655 111123567888
Q ss_pred CCccceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEE---------------cCCeE-EEEcCCCcEE--EcCEEEEcCC
Q psy7710 196 PNTGIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKE---------------NPESV-TISTKQGDHL--ESSYALVCAG 257 (473)
Q Consensus 196 ~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~---------------~~~~v-~v~~~~g~~i--~ad~VV~aaG 257 (473)
+.++.++|..++..|.+.+++.|++|+++++|++|.. +++++ .|++.+| ++ +||.||+|+|
T Consensus 173 ~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG 251 (448)
T 3axb_A 173 RSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAG 251 (448)
T ss_dssp SSEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCG
T ss_pred CCCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCC
Confidence 9999999999999999999999999999999999987 55554 6888888 78 9999999999
Q ss_pred cChHHHHHhcCCCCCCceeeeeeEEEEeCcCcccCccccccc---CCCCCCCc----cEEEEecCCC-CeEEECCCcccc
Q psy7710 258 LQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQHLVRGNIYP---VPDPNFPF----LGVHFTPRMD-GSVWLGPNAVLA 329 (473)
Q Consensus 258 ~~s~~l~~~~g~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~p~~~-g~~~iG~~~~~~ 329 (473)
+|+..|++.+|+. .++.|.|||++.+++.... ....++. .+...+|. .++|++|+.+ |++++|++.+..
T Consensus 252 ~~s~~l~~~~g~~--~~~~p~rg~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~y~~p~~~~g~~~iG~~~~~~ 328 (448)
T 3axb_A 252 VWSNRLLNPLGID--TFSRPKKRMVFRVSASTEG-LRRIMREGDLAGAGAPPLIILPKRVLVRPAPREGSFWVQLSDNLG 328 (448)
T ss_dssp GGHHHHHGGGTCC--CSEEEEEEEEEEEECCSHH-HHHHHHHCCTTSSSSCCEEEETTTEEEEEETTTTEEEEEECCCTT
T ss_pred cCHHHHHHHcCCC--CcccccceEEEEeCCcccc-cccccccccccccCCCceEEcCCceEEeecCCCCeEEEecCCccc
Confidence 9999999998875 4899999999999765321 1000000 00000111 3589999988 899999986531
Q ss_pred ccccCcccccchhHHHhhhccCCcchhccchhhhhchHHHHhhhc-chhHHHHHhhcccCCCCCCcccCCCeeceEeeCC
Q psy7710 330 FKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKEMIMSWF-PSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSS 408 (473)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~t~ 408 (473)
.+++++..+ .++ ... .+.+++.+.++||.+.+.++.+.|+|+||+. |+
T Consensus 329 -~~~~~~~~~-~~~----------------------------~~~~~~~l~~~~~~~~P~l~~~~~~~~w~G~r~~~-t~ 377 (448)
T 3axb_A 329 -RPFALEEDP-QPE----------------------------EHYYSLAILPILSLYLPQFQDAYPSGGWAGHYDIS-FD 377 (448)
T ss_dssp -SCBCCCSSC-CCC----------------------------HHHHHHHTHHHHHHHCGGGTTCCCSEEEEEEEEEE-TT
T ss_pred -CCccccccc-CCC----------------------------hHHHHHHHHHHHHHhCcCcccCCcccceEEEeccc-cC
Confidence 011111000 000 001 2355689999999999999999999999762 68
Q ss_pred CCcccc-----ccceeeeecCCccccchHHHHHHHHHHHHhhCCe-------Eecc-cc-eee-cccC
Q psy7710 409 SGDLVD-----DFGVKAIHSPHTGIVDWGLVTRVMGEEFCELGGE-------IRLN-QQ-VES-FKEN 461 (473)
Q Consensus 409 d~~p~~-----g~~~~~g~~~~~gi~~~~~~a~~~g~~~~~~~~~-------~~~~-~~-~~~-~~~~ 461 (473)
|+.|++ |+|+++|+++| |+..++.+|..+++++.....+ +++. +. ..| |...
T Consensus 378 d~~p~ig~~~~~l~~a~G~~g~-G~~~ap~~g~~la~~i~~~~~~~~~~~~~~~~~~~~~~~R~f~~~ 444 (448)
T 3axb_A 378 ANPVVFEPWESGIVVAAGTSGS-GIMKSDSIGRVAAAVALGMESVELYGGVEMPVKWMGLEGRRYEQE 444 (448)
T ss_dssp SSCEEECGGGCSEEEEECCTTC-CGGGHHHHHHHHHHHHTTCSEEECTTSCEEEGGGGSSTTCCCCCC
T ss_pred CCCcEeeecCCCEEEEECCCch-hHhHhHHHHHHHHHHHcCCCcccccccceecHhHcCccccccccC
Confidence 998874 78999999876 5766666666666666554444 4443 55 667 7543
No 9
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=100.00 E-value=5.8e-34 Score=280.27 Aligned_cols=359 Identities=13% Similarity=0.060 Sum_probs=255.5
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccC--cccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGM--HQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYF 133 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~--~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (473)
.++||+|||||++|+++|++|+++ |.+|+||||.. .+. ++|+.+.+++...+ . ......+...+.+.|.++.
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~--G~~V~vlE~~~-~~~~~gas~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~ 76 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAER--GHRVLVLERHT-FFNENGGTSGAERHWRLQY--T-QEDLFRLTLETLPLWRALE 76 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC-TTCSSSSCCSSEEEECSCC--S-SHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCC-CCCCCCCCCCcCeEEEecc--C-cchhhhHHHHHHHHHHHHH
Confidence 358999999999999999999999 99999999984 554 66666666664322 1 1234556677778888887
Q ss_pred HhcCCC-CcccCeEEEEeCc---ChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcc---cceeEecCCccceeHHHH
Q psy7710 134 DKRNIP-YKKCGKLIVALNE---QLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCK---GVKAIHSPNTGIVDWGLV 206 (473)
Q Consensus 134 ~~~~~~-~~~~g~l~~~~~~---~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~ 206 (473)
++.+.+ +...|.+.+...+ ..+.+....+.+...|+ ..++++.+++...+|.+. ..++++.+..+.++|..+
T Consensus 77 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~ 155 (397)
T 2oln_A 77 SRCERRLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSV-RYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGT 155 (397)
T ss_dssp HHHTCCCEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTC-CCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHH
T ss_pred HHhCccHHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCC-CceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHH
Confidence 776654 4667777776543 12456666677777888 678889888888777654 367889999999999999
Q ss_pred HHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeeeeEEEEeC
Q psy7710 207 TRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLN 286 (473)
Q Consensus 207 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~g~~~~~~ 286 (473)
+..|.+.+++.|++|+++++|++|..+++++.|+++++ +++||.||+|+|+|+..+++.+|+. .++.|.+++++.++
T Consensus 156 ~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~--~p~~~~~~~~~~~~ 232 (397)
T 2oln_A 156 LAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGAR--LAYSVYEMAIAAYR 232 (397)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGTCC--CCEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcCCC--CCeeEEEEEEEEEe
Confidence 99999999999999999999999998888888888877 8999999999999998999988875 47999999999886
Q ss_pred cCcccC-cccccccCCCCCCCccEEEEecCCCC----eEEECCCcccc--ccccCcccccchhHHHhhhccCCcchhccc
Q psy7710 287 PAKQHL-VRGNIYPVPDPNFPFLGVHFTPRMDG----SVWLGPNAVLA--FKKEGYRWRDFSVRELFSTLRYPGFWRLGL 359 (473)
Q Consensus 287 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~g----~~~iG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (473)
+..... ....+....+.......+|++|..++ ++++|++.... .++++.+. ..++
T Consensus 233 ~~~~~~~~p~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~~----------------- 294 (397)
T 2oln_A 233 QATPVTEAPFWFAFQQPTPQDTNLFYGFGHNPWAPGEFVRCGPDFEVDPLDHPSAATG-VADR----------------- 294 (397)
T ss_dssp BCSCCSCCCEEEEECCCCSSSCCCEEECCCCSSSSSSEEEEEECCCCSCCSSGGGCCS-SCCH-----------------
T ss_pred ecCcccCCCEEEEecCCCCcccceEEECCCCCCCCCceEEEEecCCCCCcCCCccccC-CCCH-----------------
Confidence 543110 01000000000000015799998665 79999765311 00110000 0000
Q ss_pred hhhhhchHHHHhhhcchhHHHHHhhcccCCCCCCcccCCCeeceEeeCCCCccc-----------cccceeeeecCCccc
Q psy7710 360 KYTRYGSKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLV-----------DDFGVKAIHSPHTGI 428 (473)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~t~d~~p~-----------~g~~~~~g~~~~~gi 428 (473)
...+.+++.+.++||.+.. .+.+.|+|+|+..+|+|+.|+ .|+|+++| +| |+
T Consensus 295 -------------~~~~~l~~~~~~~~p~l~~-~~~~~~~g~~~~p~t~D~~p~ig~~~~~~~~~~~l~~a~G--g~-G~ 357 (397)
T 2oln_A 295 -------------RQMDRLSGWLRDHLPTVDP-DPVRTSTCLAVLPTDPERQFFLGTARDLMTHGEKLVVYGA--GW-AF 357 (397)
T ss_dssp -------------HHHHHHHHHHHHHCTTBCS-SCSEEEEEEEEEESSTTCCCEEEESTTTSTTGGGEEEEEE--SS-CG
T ss_pred -------------HHHHHHHHHHHHhCCCCCC-CceeEEEEEecCCcCCCCCeEeecCCccccCCCCEEEEeC--cc-hh
Confidence 0134556899999999887 788999999872248999885 36899999 54 78
Q ss_pred cchHHHHHHHHHHHHhhCCeEec-ccceeecc
Q psy7710 429 VDWGLVTRVMGEEFCELGGEIRL-NQQVESFK 459 (473)
Q Consensus 429 ~~~~~~a~~~g~~~~~~~~~~~~-~~~~~~~~ 459 (473)
..++.+|+.++++|.....+.++ .+...||.
T Consensus 358 ~~ap~~g~~la~~i~~~~~~~~~~~f~~~Rf~ 389 (397)
T 2oln_A 358 KFVPLFGRICADLAVEDSTAYDISRLAPQSAL 389 (397)
T ss_dssp GGHHHHHHHHHHHHHHSCCSSCCGGGSCCC--
T ss_pred hccHHHHHHHHHHHhCCCCCCCccccccChhh
Confidence 77667777777777665444443 36777775
No 10
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=100.00 E-value=7.2e-35 Score=305.12 Aligned_cols=347 Identities=13% Similarity=0.121 Sum_probs=250.7
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHH----HHHhHHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKL----CVEGMNLAYE 131 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 131 (473)
..+||+|||||++|+++|++|+++ |.+|+|||++..+++++|+.+.|.+++........+ .++ ...+.+.+.+
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~--G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~-~~~~~~~~~~a~~~~~~ 339 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR--GAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDAL-ETFFTSAFTFARRQYDQ 339 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT--TCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHH-HHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC--CCcEEEEeCCCccccccccccCCEEecCCCCCChHH-HHHHHHHHHHHHHHHHH
Confidence 458999999999999999999999 999999999877899999999999987654333222 222 2334555555
Q ss_pred H-HHhcCCCCcccCeEEEEeCc-ChhhHHHHHHHHHhCCCC--cceeeCHHHHHhhcCCcccceeEecCCccceeHHHHH
Q psy7710 132 Y-FDKRNIPYKKCGKLIVALNE-QLEPLHDLYERSIQNNVK--DVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVT 207 (473)
Q Consensus 132 ~-~~~~~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~g~~--~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 207 (473)
+ .......+...|.+.+..++ ..+.+.. +...+++ ..++++.+++....|.....++++.+..+.++|..++
T Consensus 340 l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~----~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~ 415 (689)
T 3pvc_A 340 LLEQGIAFDHQWCGVSQLAFDDKSRGKIEK----MLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLT 415 (689)
T ss_dssp HHHTTCCCCEECCCEEEECCSHHHHHHHHH----HTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHH
T ss_pred hhhhccccccccCceEEeccCHHHHHHHHH----HHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHH
Confidence 5 33334456778888887665 4433332 3345652 1348999998888884334788999999999999999
Q ss_pred HHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCc-EEEcCEEEEcCCcChHHHHHhcCCCCCCceeeeeeEEEEeC
Q psy7710 208 RVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGD-HLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLN 286 (473)
Q Consensus 208 ~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~-~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~g~~~~~~ 286 (473)
..|.+.+++.|++|+++++|++|..++++|.|++.+|. +++||.||+|+|+|+..+.+.++ .++.|+|||++.++
T Consensus 416 ~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~----lpl~p~rGq~~~~~ 491 (689)
T 3pvc_A 416 HALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTHH----LPLSAVRGQVSHIP 491 (689)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTTT----SCCEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhccccccC----CccccccCcEEEEC
Confidence 99999999999999999999999998888999998886 79999999999999987877654 36899999999987
Q ss_pred cCcccCcccccccCCCCCCCccEEEEecCC--CCeEEECCCccccccccCcccccchhHHHhhhccCCcchhccchhhhh
Q psy7710 287 PAKQHLVRGNIYPVPDPNFPFLGVHFTPRM--DGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRY 364 (473)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (473)
...... ..+.. . ..+.|++|.. +|++++|++.+.. +.+. ..+.+
T Consensus 492 ~~~~~~------~l~~v-~-~~~~Yl~P~~~~~g~~~iGat~~~~----~~d~-~~~~~--------------------- 537 (689)
T 3pvc_A 492 TTPVLS------QLQQV-L-CYDGYLTPVNPANQHHCIGASYQRG----DIAT-DFRLT--------------------- 537 (689)
T ss_dssp CCTTGG------GCCSE-E-ESSSEECCCBTTTTEEEEECCCEET----BCCC-CCCHH---------------------
T ss_pred CCCccc------cCCee-E-eCCceEccccCCCCeEEEEEeccCC----CCCC-CCCHH---------------------
Confidence 543210 00000 0 1136999998 7999999986542 1111 11111
Q ss_pred chHHHHhhhcchhHHHHHhhcccCCC-----CCCcccCCCeeceEeeCCCCccc--------------------------
Q psy7710 365 GSKEMIMSWFPSMRVNELKQYIEEIE-----AGDIQRGPSGVRAQALSSSGDLV-------------------------- 413 (473)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~P~l~-----~~~i~~~w~G~rp~~~t~d~~p~-------------------------- 413 (473)
. .+.+++++.+++|.+. +.++.+.|+|+||+ |+|+.|+
T Consensus 538 ~---------~~~ll~~l~~~~P~l~~~~~~~~~~~~~w~G~R~~--t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~ 606 (689)
T 3pvc_A 538 E---------QQENRERLLRCLPQVSWPQQVDVSDNQARCGVRCA--IRDHLPMVGAVPDYAATLAQYQDLSRRIQHGGE 606 (689)
T ss_dssp H---------HHHHHHHHHHHCTTCSGGGGCCCTTCCEEEEEEEE--CTTSCCEEEEEECHHHHHHHSTTHHHHC-----
T ss_pred H---------HHHHHHHHHHhCCCccccccccccccceeEEEeee--cCCCCcccCcCCCHHHHHHHHHhhhcccccccc
Confidence 0 2345688999999987 45678999999987 8999985
Q ss_pred ------------cccceeeeecCCccccchHHHHHHHHHHHHhhCCeEe----cccceeecc
Q psy7710 414 ------------DDFGVKAIHSPHTGIVDWGLVTRVMGEEFCELGGEIR----LNQQVESFK 459 (473)
Q Consensus 414 ------------~g~~~~~g~~~~~gi~~~~~~a~~~g~~~~~~~~~~~----~~~~~~~~~ 459 (473)
.|+|+++||+++ |+..++.+|..++++|+....+++ ..+...||.
T Consensus 607 ~~~~~~~~~~~~~~l~~a~G~g~~-Gl~~ap~~ae~lA~~i~g~~~p~~~~~l~~~~p~Rf~ 667 (689)
T 3pvc_A 607 SEVNDIAVAPVWPELFMVGGLGSR-GLCSAPLVAEILAAQMFGEPLPLDAKTLAALNPNRFW 667 (689)
T ss_dssp ---CCCCCCCEEEEEEEEECCTTC-HHHHHHHHHHHHHHHHTTCCCSSCHHHHHTTCTTHHH
T ss_pred ccccccccCCCCCChHHhhccccc-HHHHHHHHHHHHHHHHcCCCCCCCHHHHhhcChhHHH
Confidence 357899998775 676666666666666653333333 235566665
No 11
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=100.00 E-value=2.5e-34 Score=300.89 Aligned_cols=347 Identities=12% Similarity=0.156 Sum_probs=251.7
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
..+||+|||||++|+++|++|+++ |.+|+|||+...+++++|+.+.|.+++........ ..++...+.....++.++
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~--G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 347 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRR--GWQVTLYCADEAPALGASGNRQGALYPLLSKHDEA-LNRFFSNAFTFARRFYDQ 347 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCcccccCccCCCceecCcCCCCccH-HHHHHHHHHHHHHHHHHH
Confidence 348999999999999999999999 99999999987889899999999998765433322 234444444555566666
Q ss_pred cCC--CCcccCeEEEEeCc-ChhhHHHHHHHHHhCCCC--cceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHH
Q psy7710 136 RNI--PYKKCGKLIVALNE-QLEPLHDLYERSIQNNVK--DVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVM 210 (473)
Q Consensus 136 ~~~--~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~g~~--~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 210 (473)
.+. .+...|.+.+..+. ..+.+.. +...+++ .+++++.+++....+.....++++.+..+.++|..++..|
T Consensus 348 l~~~~~~~~~g~l~~~~~~~~~~~~~~----~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL 423 (676)
T 3ps9_A 348 LPVKFDHDWCGVTQLGWDEKSQHKIAQ----MLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNV 423 (676)
T ss_dssp CCSCCCEECCCEEEECCSHHHHHHHHH----HHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHH
T ss_pred CCCCcCcCcCCeeeecCCHHHHHHHHH----HHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHH
Confidence 654 34567888777665 4443332 3455652 2348999988888774334788999999999999999999
Q ss_pred HHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeeeeEEEEeCcCcc
Q psy7710 211 GEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAKQ 290 (473)
Q Consensus 211 ~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~g~~~~~~~~~~ 290 (473)
.+.+++.|++|+++++|++|..++++|.|++.+|.+++||.||+|+|.|+..+.+..+ .++.|+|||++.++....
T Consensus 424 ~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~----lpl~p~rGq~~~~~~~~~ 499 (676)
T 3ps9_A 424 LELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTST----LPVYSVAGQVSHIPTTPE 499 (676)
T ss_dssp HHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGCSTTTTT----CSCEEEEEEEEEEECCTT
T ss_pred HHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhccccccC----CcceeecCEEEEECCCcc
Confidence 9999999999999999999999888899999887689999999999999987877654 368999999999865432
Q ss_pred cCcccccccCCCCCCCccEEEEecCC--CCeEEECCCccccccccCcccccchhHHHhhhccCCcchhccchhhhhchHH
Q psy7710 291 HLVRGNIYPVPDPNFPFLGVHFTPRM--DGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKE 368 (473)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~p~~--~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (473)
.. ..+.. . ..+.|++|.. +|++++|++.+.. +.+. +.+.+ .
T Consensus 500 ~~------~l~~~-l-~~~~Yl~P~~~~~g~~~iG~t~~~~----~~d~-~~~~~---------------------~--- 542 (676)
T 3ps9_A 500 LA------ELKQV-L-CYDGYLTPQNPANQHHCIGASYHRG----SEDT-AYSED---------------------D--- 542 (676)
T ss_dssp GG------GCCSE-E-ESSSEECCCBTTTTEEEEECCCEET----CCCC-CCCHH---------------------H---
T ss_pred cc------cCCce-e-ECCeeeccccCCCCeEEEeeccCCC----CCCC-CCCHH---------------------H---
Confidence 10 00000 0 1136999987 7999999986542 1111 11111 0
Q ss_pred HHhhhcchhHHHHHhhcccCCC-----CCCcccCCCeeceEeeCCCCcccc-----------------------------
Q psy7710 369 MIMSWFPSMRVNELKQYIEEIE-----AGDIQRGPSGVRAQALSSSGDLVD----------------------------- 414 (473)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~P~l~-----~~~i~~~w~G~rp~~~t~d~~p~~----------------------------- 414 (473)
.+.+++++.+++|.+. +..+.+.|+|+||+ |+|+.|++
T Consensus 543 ------~~~~l~~l~~~~P~l~~~~~~d~~~~~~~~G~R~~--t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~ 614 (676)
T 3ps9_A 543 ------QQQNRQRLIDCFPQAQWAKEVDVSDKEARCGVRCA--TRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVF 614 (676)
T ss_dssp ------HHHHHHHHHHHSTTCHHHHTCCCTTCCEEEEEEEE--CTTCCCEEEEEECHHHHHHHTTTTTSCCTTCCSCCEE
T ss_pred ------HHHHHHHHHHhCCCccccccCcccccceEEEEeCc--cCCcCCccCcCCChHHHHHHHHhhhccccccccCCCC
Confidence 2345688999999976 35678999999987 89999862
Q ss_pred -ccceeeeecCCccccchHHHHHHHHHHHHhhCCeEe----cccceeecc
Q psy7710 415 -DFGVKAIHSPHTGIVDWGLVTRVMGEEFCELGGEIR----LNQQVESFK 459 (473)
Q Consensus 415 -g~~~~~g~~~~~gi~~~~~~a~~~g~~~~~~~~~~~----~~~~~~~~~ 459 (473)
|+|+++||+++ |+..++.+|..++++|+....+++ ..+...||.
T Consensus 615 ~~l~~a~G~g~~-Gl~~Ap~~ae~lA~~i~g~~~pl~~~~l~~~~p~Rf~ 663 (676)
T 3ps9_A 615 DDLFMFAALGSR-GLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLW 663 (676)
T ss_dssp EEEEEEECCTTC-HHHHHHHHHHHHHHHHTTCCCSSBHHHHHTTCTTHHH
T ss_pred CCEeeeeccccc-HHHHHHHHHHHHHHHHcCCCCCCCHHHHhhhChHHhH
Confidence 57899998775 676555666666666543333333 235555654
No 12
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=100.00 E-value=1e-33 Score=302.61 Aligned_cols=372 Identities=19% Similarity=0.242 Sum_probs=264.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEeccCcc-cCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKEKEL-GMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYF 133 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~~~~-g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (473)
.++||+|||||++|+++|++|+++ |. +|+|||++... .+++|+++.|++... ........+...+.+.+.++.
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~--G~~~V~vlE~~~~~~~~gss~~~~G~~~~~---~~~~~~~~l~~~s~~~~~~l~ 77 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTR--GWNNITVLDQGPLNMPGGSTSHAPGLVFQT---NPSKTMASFAKYTVEKLLSLT 77 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSCTTCCCSGGGTCCCEECCC---CSCHHHHHHHHHHHHHHHHCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC--CCCcEEEEeCCCCCCCcccceeCCceeecC---CCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999 87 99999998433 356677777877543 233344566677777777663
Q ss_pred HhcCCCCcccCeEEEEeCc-ChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCccc---ceeEecCCccceeHHHHHHH
Q psy7710 134 DKRNIPYKKCGKLIVALNE-QLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKG---VKAIHSPNTGIVDWGLVTRV 209 (473)
Q Consensus 134 ~~~~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~ 209 (473)
+.....+...|.+.+..++ ..+.+....+.....|+ ..++++.+++...+|.+.. .++++.+.++.++|..++..
T Consensus 78 ~~~~~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~-~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~ 156 (830)
T 1pj5_A 78 EDGVSCFNQVGGLEVATTETRLADLKRKLGYAAAWGI-EGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQL 156 (830)
T ss_dssp ETTEESEECCCEEEEESSHHHHHHHHHHHHHHHHHTC-CCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHH
T ss_pred hhCCCCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCC-CeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHH
Confidence 2222246778888888777 66667777777777888 7899999999999887653 67899999999999999999
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEcCCeE-EEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeeeeEEEEeCcC
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPA 288 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~g~~~~~~~~ 288 (473)
|.+.++++|++|+++++|++|..+++++ .|++.+| +++||.||+|+|.|+..+.+++|++. ++.|++||++.+.+.
T Consensus 157 L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~~~--pl~p~~g~~~~~~~~ 233 (830)
T 1pj5_A 157 LIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGMAV--PLLPLAHQYVKTTPV 233 (830)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTCCC--CCEEEEEEEEEESCC
T ss_pred HHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCCCc--cceeceeEEEEEecC
Confidence 9999999999999999999999877765 5888888 89999999999999999999998764 899999999999765
Q ss_pred cccCcccc---cccCCCCCCCccEEEEecCCCCeEEECCCccccc--cccCcccccchhHHHhhhccCCcchhccchhhh
Q psy7710 289 KQHLVRGN---IYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAF--KKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTR 363 (473)
Q Consensus 289 ~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~g~~~iG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (473)
+....... ....|....+...+|++|..+ ++++|++..... ........ .+.+ .+....+.. ...+.
T Consensus 234 ~~~~~~~~~~~~~~~pv~~~~~~~~y~r~~~~-~l~iG~~~~~~~~~~~~~~~~t--~~~~-~~~~~~~~~----~~~~~ 305 (830)
T 1pj5_A 234 PAQQGRNDQPNGARLPILRHQDQDLYYREHGD-RYGIGSYAHRPMPVDVDTLGAY--APET-VSEHHMPSR----LDFTL 305 (830)
T ss_dssp GGGTTTSCTTTCCCSCEEEEGGGTEEEEEETT-EEEEEECCSCCCBCCGGGSCCC--CGGG-CBTTBSTTE----ECCCH
T ss_pred cccccccccccCCCCCeEEcCCCCEEEEEeCC-eEEEeccCCCCcccCccccccc--cccc-ccccccccc----cCCCH
Confidence 32110000 000010000112479999854 788888642110 00000000 0000 000000000 00000
Q ss_pred hchHHHHhhhcchhHHHHHhhcccCCCCCCcccCCCeeceEeeCCCCccc-------cccceeeeecCCccccchHHHHH
Q psy7710 364 YGSKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLV-------DDFGVKAIHSPHTGIVDWGLVTR 436 (473)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~t~d~~p~-------~g~~~~~g~~~~~gi~~~~~~a~ 436 (473)
...+.+++.+.+++|.|.+.++.+.|+|+||+ |+|+.|+ .|+|+++|+ |+..++.+|.
T Consensus 306 ---------~~~~~l~~~~~~~~P~l~~~~i~~~w~G~r~~--t~D~~PiIG~~p~~~gl~va~G~----G~~~ap~~g~ 370 (830)
T 1pj5_A 306 ---------EDFLPAWEATKQLLPALADSEIEDGFNGIFSF--TPDGGPLLGESKELDGFYVAEAV----WVTHSAGVAK 370 (830)
T ss_dssp ---------HHHHHHHHHHHHHCGGGGGSCEEEEEEEEEEE--CTTSCCEEEECSSSBTEEEEESC----CGGGHHHHHH
T ss_pred ---------HHHHHHHHHHHHhCccccccCcceEEEeeccc--CCCCCeeeccCCCCCCEEEEECc----hHHhhHHHHH
Confidence 11345678999999999999999999999987 8999986 478999885 5666777888
Q ss_pred HHHHHHHhhCCeEec-ccceeecc
Q psy7710 437 VMGEEFCELGGEIRL-NQQVESFK 459 (473)
Q Consensus 437 ~~g~~~~~~~~~~~~-~~~~~~~~ 459 (473)
.++++|.....++++ +++..||.
T Consensus 371 ~la~li~~~~~~~dl~~~~~~Rf~ 394 (830)
T 1pj5_A 371 AMAELLTTGRSETDLGECDITRFE 394 (830)
T ss_dssp HHHHHHHHSSCSSCCTTTBGGGCC
T ss_pred HHHHHHhCCCCCccccccChhhhc
Confidence 888888777666664 47888885
No 13
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=100.00 E-value=3.4e-32 Score=271.13 Aligned_cols=353 Identities=15% Similarity=0.100 Sum_probs=231.6
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEeccCcccCcccCCCcceEEeeccCCCchhHH------HHHHHhHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKA------KLCVEGMNL 128 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~ 128 (473)
.++||+|||||++|+++|++|+++ |. +|+|||+....++.+++.+.+.+....+. ..... .+...+.+.
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~--G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~ 80 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARR--GYTNVTVLDPYPVPSAISAGNDVNKVISSGQY--SNNKDEIEVNEILAEEAFNG 80 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSCSSCTTCTTCSSCEEECCCCS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHc--CCCcEEEEeCCCCCCCCccCCCCccEEEeccC--CchhhhcchhHHHHHHHHHH
Confidence 568999999999999999999999 89 99999999554444444444433332221 12223 566666666
Q ss_pred HHHHHHhcCCCCcccCeEEEEeCc-ChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCC-c-c--cce--eEecCCc-cc
Q psy7710 129 AYEYFDKRNIPYKKCGKLIVALNE-QLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPY-C-K--GVK--AIHSPNT-GI 200 (473)
Q Consensus 129 ~~~~~~~~~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~-~-~--~~~--~~~~~~~-~~ 200 (473)
|.++ ......+...|.+.+.... ..+.+...... ..+....++++.+++...+|. + . ..+ +++.+.. +.
T Consensus 81 ~~~~-~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~--~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~ 157 (438)
T 3dje_A 81 WKND-PLFKPYYHDTGLLMSACSQEGLDRLGVRVRP--GEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGW 157 (438)
T ss_dssp HHHC-TTTGGGEECCCEEEEECSHHHHHHHHHHHCG--GGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEE
T ss_pred HhhC-ccccCcEeccceEEEecCcchHHHHHHHHhh--cccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEE
Confidence 6553 1122346677888877665 44444444433 345522378899999988886 3 1 244 8899999 99
Q ss_pred eeHHHHHHHHHHHHHHcCcEEEeCc---eEEEEEEcCCeEE-EEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCcee
Q psy7710 201 VDWGLVTRVMGEEFCELGGEIRLNQ---QVESFKENPESVT-ISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIV 276 (473)
Q Consensus 201 ~~~~~~~~~l~~~~~~~Gv~i~~~~---~V~~i~~~~~~v~-v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~ 276 (473)
+++..++..|.+.++++|++|++++ +|++|..+++++. |++.+|.+++||.||+|+|+|+..|++ ++ .++.
T Consensus 158 ~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~~-l~----~~~~ 232 (438)
T 3dje_A 158 AHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQFLD-FK----NQLR 232 (438)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGTSC-CT----TCCE
T ss_pred ecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhhcC-cc----ccee
Confidence 9999999999999999999999999 9999998888887 999998789999999999999987765 32 3577
Q ss_pred eeeeEEEEeCcCcccCcccccccCCCCCCCccEEEEecCCC-CeEEECCCccccccccCcccccchhHHHhhhccCCcch
Q psy7710 277 PFRGEYLLLNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMD-GSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFW 355 (473)
Q Consensus 277 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (473)
|.++++..+....... .. ....|.......++|++|..+ +.+++|.... ++......+.. .....+..
T Consensus 233 p~~~~~~~~~l~~~~~-~~-~~~~p~~~~~~~~~~~~p~~~~~~l~i~~~~~------g~~~~~~~~~~--~~~~~p~~- 301 (438)
T 3dje_A 233 PTAWTLVHIALKPEER-AL-YKNIPVIFNIERGFFFEPDEERGEIKICDEHP------GYTNMVQSADG--TMMSIPFE- 301 (438)
T ss_dssp EEEEEEEEEECCGGGH-HH-HTTCCEEEETTTEEECSCCTTTCEEEEEECCS------CEECEEECTTC--CEEECCCC-
T ss_pred eEEEEEEEEEcChHHh-hh-hcCCCEEEECCCceecCCCCCCCeEEEEeCCC------CccCCccCCCc--ccccCCcc-
Confidence 8766655543322110 00 000110000123788888854 5577752110 00000000000 00000000
Q ss_pred hccchhhhhchHHHHhhhcchhHHHHHhhcccCCCCCCcccCCCeeceEeeCCCCccc-------cccceeeeecCCccc
Q psy7710 356 RLGLKYTRYGSKEMIMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLV-------DDFGVKAIHSPHTGI 428 (473)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~t~d~~p~-------~g~~~~~g~~~~~gi 428 (473)
.. .... ...+.+.+.+.++||.|.+.++.+.|+|+||+ |||+.|+ .|+|+++||++| |+
T Consensus 302 ----~~--~~~~-----~~~~~l~~~~~~~~P~l~~~~~~~~~~g~~~~--t~D~~piig~~p~~~~l~~a~G~~g~-G~ 367 (438)
T 3dje_A 302 ----KT--QIPK-----EAETRVRALLKETMPQLADRPFSFARICWCAD--TANREFLIDRHPQYHSLVLGCGASGR-GF 367 (438)
T ss_dssp ----CS--SCBH-----HHHHHHHHHHHHHCGGGTTCCCSEEEEEEEEE--CTTSCCEEEECSSCTTEEEEECCTTC-CG
T ss_pred ----cc--cCCH-----HHHHHHHHHHHHhCcccccCCcceeeEEEeCc--CCCCCeEEeecCCCCCEEEEECCCCc-ch
Confidence 00 0000 11345568899999999999999999999987 8999886 589999999876 57
Q ss_pred cchHHHHHHHHHHHHhh
Q psy7710 429 VDWGLVTRVMGEEFCEL 445 (473)
Q Consensus 429 ~~~~~~a~~~g~~~~~~ 445 (473)
..++.+|..++++|+..
T Consensus 368 ~~ap~~g~~la~~i~g~ 384 (438)
T 3dje_A 368 KYLPSIGNLIVDAMEGK 384 (438)
T ss_dssp GGTTTHHHHHHHHHHTC
T ss_pred hhhHHHHHHHHHHHhCC
Confidence 66667777777776543
No 14
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=100.00 E-value=3e-33 Score=270.53 Aligned_cols=314 Identities=15% Similarity=0.125 Sum_probs=219.2
Q ss_pred ccEEEEcCChHHHHHHHHHHhcC----CCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHH
Q psy7710 58 YDVVVVGGGIVGVATARELKLNY----PKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYF 133 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~----~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (473)
+||+|||||++|+++|++|++++ |+.+|+|||+. .+++++|..++|++.+............+...+.+.+.++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~-~~~~~aS~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADR-FTPLTTTDVAAGLWQPYLSDPNNPQEADWSQQTFDYLLSHV 79 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESS-CGGGSGGGTCCCBCCCCSSCCSCTHHHHHHHHHHHHHHTTT
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECC-CCCCCccccCcceeecccCCCchHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999993 23999999998 57888999999998874332334445566666767666655
Q ss_pred HhcC---CCC-cccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHH
Q psy7710 134 DKRN---IPY-KKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRV 209 (473)
Q Consensus 134 ~~~~---~~~-~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 209 (473)
.+.. ..+ ...|.+......+.+ .+.+.+. .+++++.+++. .+|.. .++++.+ ++.++|..++..
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~-~~~~l~~~e~~-~~p~~--~~~~~~~-~~~v~p~~~~~~ 147 (351)
T 3g3e_A 80 HSPNAENLGLFLISGYNLFHEAIPDP-------SWKDTVL-GFRKLTPRELD-MFPDY--GYGWFHT-SLILEGKNYLQW 147 (351)
T ss_dssp TSTTHHHHTEEEEEEEEEESSCCCCC-------GGGGTSE-EEEECCHHHHT-TCTTC--CEEEEEE-EEEECHHHHHHH
T ss_pred hccCCCCccEEEEEEEEEecCCcccc-------CHHHhCC-CceECCHHHhc-cCCCC--ceEEEec-ceEEcHHHHHHH
Confidence 4431 223 334444433222322 1223455 67889998883 45542 4567776 689999999999
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeeeeEEEEeCcCc
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAK 289 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~g~~~~~~~~~ 289 (473)
|.+.++++|++|++ ++|+++...+ .++||.||+|+|.|+..+++ +.++.|.|||++.++++.
T Consensus 148 l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s~~l~~------~~~l~p~rg~~~~~~~~~ 209 (351)
T 3g3e_A 148 LTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWAGALQR------DPLLQPGRGQIMKVDAPW 209 (351)
T ss_dssp HHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGGGGTSC------CTTCEEEEEEEEEEECTT
T ss_pred HHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcChHhhcC------CCceeecCCcEEEEeCCC
Confidence 99999999999988 8888775321 36799999999999977653 257999999999997642
Q ss_pred ccCcccccccCCCCCCCccEEEEecCCCCeEEECCCccccccccCcccccchhHHHhhhccCCcchhccchhhhhchHHH
Q psy7710 290 QHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKEM 369 (473)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (473)
....++...........+|++|+.+ ++++|++.+.. +++. ..+.+
T Consensus 210 ---~~~~~~~~~~~~~~~~~~y~~p~~~-~~~iGg~~~~~----~~~~-~~~~~-------------------------- 254 (351)
T 3g3e_A 210 ---MKHFILTHDPERGIYNSPYIIPGTQ-TVTLGGIFQLG----NWSE-LNNIQ-------------------------- 254 (351)
T ss_dssp ---CCSEEEECCTTTCTTCSCEEEECSS-CEEEECCCEET----CCCC-SCCHH--------------------------
T ss_pred ---cceEEEeccccCCCCceeEEEeCCC-cEEEeeeeecC----CCCC-CCCHH--------------------------
Confidence 2222221110001122579999977 89999986542 1111 00110
Q ss_pred HhhhcchhHHHHHhhcccCCCCCCcccCCCeeceEeeCCCCccc-----------cccceeeeecCCccccchHHHHHHH
Q psy7710 370 IMSWFPSMRVNELKQYIEEIEAGDIQRGPSGVRAQALSSSGDLV-----------DDFGVKAIHSPHTGIVDWGLVTRVM 438 (473)
Q Consensus 370 ~~~~~~~~~~~~~~~~~P~l~~~~i~~~w~G~rp~~~t~d~~p~-----------~g~~~~~g~~~~~gi~~~~~~a~~~ 438 (473)
..+.+++.+.+++|.+.+.++.+.|+|+||+ |+| .|+ .|+|+++||+++ |+..++.+|..+
T Consensus 255 ----~~~~l~~~~~~~~P~l~~~~i~~~w~G~r~~--t~D-~p~~~~~ig~~~~~~~~~~~~G~~g~-G~~~ap~~g~~l 326 (351)
T 3g3e_A 255 ----DHNTIWEGCCRLEPTLKNARIIGERTGFRPV--RPQ-IRLEREQLRTGPSNTEVIHNYGHGGY-GLTIHWGCALEA 326 (351)
T ss_dssp ----HHHHHHHHHHHHCGGGGGCEEEEEEEEEEEE--CSS-CEEEEEEECCSSSCEEEEEEECCTTC-HHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhCCCccCCcEeeeeEeeCCC--CCC-ccceeeeccCCCCCCeEEEEeCCCcc-hHhhhHHHHHHH
Confidence 1345568999999999999999999999988 788 763 578999998875 676666667777
Q ss_pred HHHHHhh
Q psy7710 439 GEEFCEL 445 (473)
Q Consensus 439 g~~~~~~ 445 (473)
++++.+.
T Consensus 327 a~li~~~ 333 (351)
T 3g3e_A 327 AKLFGRI 333 (351)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666553
No 15
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.98 E-value=2.2e-30 Score=261.59 Aligned_cols=310 Identities=14% Similarity=0.095 Sum_probs=211.5
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHhc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDKR 136 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (473)
++||+|||||++|+++|++|+++ |.+|+|+|++ .+++++|+++.++++.+..+... ....+...+...+..+.+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~--G~~V~llE~~-~~~~gtS~~s~gli~~g~~~~~~-~~~~l~~~~~~~~~~l~~~~ 78 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGR--GLSVLMLEAQ-DLACATSSASSKLIHGGLRYLEH-YEFRLVSEALAEREVLLKMA 78 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSS-STTCSGGGSSCCEECCCGGGGGG-TCHHHHHHHHHHHHHHHHHC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC--CCCEEEEECC-CCCCCccccccccccccchhhhh-chHHHHHHHHHHHHHHHHhC
Confidence 58999999999999999999999 9999999998 68899999999999988765432 12345555555555554433
Q ss_pred CCCCcccCeEEEEeCc--ChhhHHHHHHHHHhCCCCcceeeCHHHHHhhc--CCccc--ceeEecCCccceeHHHHHHHH
Q psy7710 137 NIPYKKCGKLIVALNE--QLEPLHDLYERSIQNNVKDVRLVSAEEIKTIE--PYCKG--VKAIHSPNTGIVDWGLVTRVM 210 (473)
Q Consensus 137 ~~~~~~~g~l~~~~~~--~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~--p~~~~--~~~~~~~~~~~~~~~~~~~~l 210 (473)
..-....+.+...... ...............+ ..++++.+++...+ |.+.. .++++. .+++++|..++..|
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~P~l~~~~~~~~~~-~~g~v~~~~l~~~l 155 (501)
T 2qcu_A 79 PHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLG--KRTSLPGSTGLRFGANSVLKPEIKRGFEY-SDCWVDDARLVLAN 155 (501)
T ss_dssp TTTEEEEEEEEECCTTTSCHHHHHHHHHHHHSSS--CCSSSCCCEEEECCTTSSBCTTCCEEEEE-EEEEECHHHHHHHH
T ss_pred CccccccCeEeccCcccchHHHHHHHHHHHHhcC--CcEEECHHHHHHhhcCCCcchhceEEEEe-eCCEEcHHHHHHHH
Confidence 3112222222222111 1111112222222222 45677777666666 76543 344444 57889999999999
Q ss_pred HHHHHHcCcEEEeCceEEEEEEcCCeEEEEc---CCCc--EEEcCEEEEcCCcChHHHHHh-cCCCCCCceeeeeeEEEE
Q psy7710 211 GEEFCELGGEIRLNQQVESFKENPESVTIST---KQGD--HLESSYALVCAGLQADEMALK-SGCSLEPAIVPFRGEYLL 284 (473)
Q Consensus 211 ~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~---~~g~--~i~ad~VV~aaG~~s~~l~~~-~g~~~~~~~~p~~g~~~~ 284 (473)
.+.+++.|++++++++|+++..+++.+.|++ .+|. +++||.||+|+|.|+..+.+. ++.....++.|.||+++.
T Consensus 156 ~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~~i~p~rG~~~~ 235 (501)
T 2qcu_A 156 AQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIV 235 (501)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSSCBCCEEEEEEE
T ss_pred HHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCcccccccceeEEEE
Confidence 9999999999999999999998877677766 3564 789999999999999998885 554323479999999998
Q ss_pred eCcCcccCcccccccCCCCCCCccEEEEecCCCCeEEECCCccccc-cccCcccccchhHHHhhhccCCcchhccchhhh
Q psy7710 285 LNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAF-KKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTR 363 (473)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~iG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (473)
++..... ....+++.++ ...+|+.|..+|.+++|+|..... +++ +..+ +.
T Consensus 236 ~~~~~~~-~~~~~~~~~d----g~~~~~~P~~~g~~~iG~t~~~~~~~~~-----~~~~-------------------~~ 286 (501)
T 2qcu_A 236 VPRVHTQ-KQAYILQNED----KRIVFVIPWMDEFSIIGTTDVEYKGDPK-----AVKI-------------------EE 286 (501)
T ss_dssp EECSSSC-SCEEEEECTT----SCEEEEEEETTTEEEEECCCEECCSCGG-----GCCC-------------------CH
T ss_pred ECCCCCC-ceEEEeecCC----CCEEEEEEcCCCcEEEcCCCCCCCCCcC-----CCCC-------------------CH
Confidence 8643211 1112222111 236899999889999999854210 000 0000 00
Q ss_pred hchHHHHhhhcchhHHHHHhhccc-CCCCCCcccCCCeeceEeeCCCCccc
Q psy7710 364 YGSKEMIMSWFPSMRVNELKQYIE-EIEAGDIQRGPSGVRAQALSSSGDLV 413 (473)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~i~~~w~G~rp~~~t~d~~p~ 413 (473)
+. .+.+++.+.++|| .+...+|++.|+|+||. ++|+.|.
T Consensus 287 ~~---------~~~l~~~~~~~~p~~l~~~~v~~~~aG~Rp~--~~d~~p~ 326 (501)
T 2qcu_A 287 SE---------INYLLNVYNTHFKKQLSRDDIVWTYSGVRPL--CDDESDS 326 (501)
T ss_dssp HH---------HHHHHHHHHHHBSSCCCGGGCCEEEEEEECC--BCCCCSS
T ss_pred HH---------HHHHHHHHHHhcCCCCCcccEEEEEEEEeee--cCCCCCc
Confidence 11 3456799999999 89989999999999998 6888774
No 16
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.97 E-value=1e-29 Score=259.71 Aligned_cols=343 Identities=15% Similarity=0.132 Sum_probs=225.1
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
.++||+|||||++|+++|++|+++ |.+|+|||++ .+++++|++|.++++.+..|.... ...+...+...+..+...
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~r--G~~V~LlE~~-~~~~GtS~~s~gli~~g~ryl~~~-~~~l~~~~~~e~~~l~~~ 106 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAAS--GIKTGLIEMQ-DFAEGTSSRSTKLVHGGIRYLKTF-DVEVVADTVGERAVVQGI 106 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSS-STTCSGGGSSCSEECCCGGGGGGT-CHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCC-CCCCCcccccccccccccchhhcc-ChHHHHHHHHHHHHHHHh
Confidence 368999999999999999999999 9999999998 688999999999999887654321 122333333222222221
Q ss_pred cCCCCcccCeEEEEeCc-C---hh-----hHHHHHHHHH---hCCCCcceeeCHHHHHhhcCCccc---ceeEecCCccc
Q psy7710 136 RNIPYKKCGKLIVALNE-Q---LE-----PLHDLYERSI---QNNVKDVRLVSAEEIKTIEPYCKG---VKAIHSPNTGI 200 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~-~---~~-----~~~~~~~~~~---~~g~~~~~~l~~~~~~~~~p~~~~---~~~~~~~~~~~ 200 (473)
...-....+.+...... . .. .....++.+. ..+. ..++++++++...+|.+.. .++++.+. +.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~l~~~e~~~~~P~l~~~~~~gg~~~~d-g~ 184 (571)
T 2rgh_A 107 APHIPKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKY-ENYTLTPEEVLEREPFLKKEGLKGAGVYLD-FR 184 (571)
T ss_dssp CTTSSEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTT-CCEEECHHHHHHHCTTSCCTTEEEEEEECC-EE
T ss_pred CcccccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCC-CcEEECHHHHHHhCcCCchhhceEEEEecC-Ce
Confidence 11112344555443332 1 11 1122333333 2344 6789999999999998753 45666664 78
Q ss_pred eeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeE-EEE-----cCCCcEEEcCEEEEcCCcChHHHHHhcCCCCC-C
Q psy7710 201 VDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESV-TIS-----TKQGDHLESSYALVCAGLQADEMALKSGCSLE-P 273 (473)
Q Consensus 201 ~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v-~v~-----~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~-~ 273 (473)
++|..++..+.+.+++.|++|+++++|+++..+++.+ .|+ +.++.+++||.||+|+|+|+..+.++.|.... .
T Consensus 185 v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~~~~~~ 264 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTRPVSP 264 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCSSCCCC
T ss_pred EchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhccCccCc
Confidence 9999999999999999999999999999999877653 354 23323799999999999999999988886533 4
Q ss_pred ceeeeeeEEEEeCcCcccCcccccccCCCCCCCccEEEEecCCCCeEEECCCccccccccCcccccchhHHHhhhccCCc
Q psy7710 274 AIVPFRGEYLLLNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPG 353 (473)
Q Consensus 274 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (473)
++.|.||+++.++..........+++.+. .+...+|++|. ++.+++|+|.+... .+..+. ..+.
T Consensus 265 ~i~p~rG~~l~~~~~~~~~~~~~~~~~~~--~dgr~~~~~P~-~~~~~iG~t~~~~~-~~~~~~-~~~~----------- 328 (571)
T 2rgh_A 265 KMRPTKGIHLVVDAKKLPVPQPTYFDTGK--QDGRMVFAIPR-ENKTYFGTTDTDYQ-GDFTDP-KVTQ----------- 328 (571)
T ss_dssp CBCCEEEEEEEEEGGGSCCSSCEEEECSS--SSSCEEEEEEE-TTEEEECCCCEECC-SCSSSC-CCCH-----------
T ss_pred eeeccceEEEEeccccCCCCcEEEEeccC--CCCcEEEEEEc-CCeEEEcCCCcCCC-CCcCCC-CCCH-----------
Confidence 69999999999975321111111222110 11235799998 57899999865210 000000 0000
Q ss_pred chhccchhhhhchHHHHhhhcchhHHHHHhhcccC--CCCCCcccCCCeeceEeeCCCCc---------cc-----cccc
Q psy7710 354 FWRLGLKYTRYGSKEMIMSWFPSMRVNELKQYIEE--IEAGDIQRGPSGVRAQALSSSGD---------LV-----DDFG 417 (473)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~i~~~w~G~rp~~~t~d~~---------p~-----~g~~ 417 (473)
+. ++.+++.+.++||. +...+|++.|+|+||+ ++|+. |+ .|++
T Consensus 329 ----------~~---------~~~ll~~~~~~~P~~~l~~~~v~~~waG~Rp~--~~d~~~~~~~~~r~~~i~~~~~gl~ 387 (571)
T 2rgh_A 329 ----------ED---------VDYLLDVINHRYPEANITLADIEASWAGLRPL--LIGNSGSPSTISRGSSLEREPDGLL 387 (571)
T ss_dssp ----------HH---------HHHHHHHHHHHSTTTCCCGGGCCEEEEEEECC--BCC-----------EEEEECTTSCE
T ss_pred ----------HH---------HHHHHHHHHHhcCccCCchhceeEEeEEeeec--cCCCCCCcccCCCCcEEecCCCCeE
Confidence 01 34567999999997 4778999999999998 45542 21 3444
Q ss_pred eeeeecCCccccchHHHHHHHHHHHHhh
Q psy7710 418 VKAIHSPHTGIVDWGLVTRVMGEEFCEL 445 (473)
Q Consensus 418 ~~~g~~~~~gi~~~~~~a~~~g~~~~~~ 445 (473)
..+|. .+..++.+|+.+++++++.
T Consensus 388 ~v~GG----k~Tt~r~~Ae~~~~~i~~~ 411 (571)
T 2rgh_A 388 TLSGG----KITDYRKMAEGALRLIRQL 411 (571)
T ss_dssp EEEEC----CGGGHHHHHHHHHHHHHHH
T ss_pred EEeCc----chhhHHHHHHHHHHHHHHH
Confidence 33331 1445567777777777664
No 17
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.97 E-value=2.3e-31 Score=261.96 Aligned_cols=322 Identities=13% Similarity=0.059 Sum_probs=211.9
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcc-eE-EeeccCCCchhHHHHHHHhHHHHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSG-VV-HAGIYYKPGTLKAKLCVEGMNLAYEYF 133 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (473)
.++||+|||||++|+++|++|+++.||.+|+|||+. .++.++|+.+.| .+ .+.. +... ...+...+.+.|.+
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~-~~~~~~s~~~~g~~i~~~~~-~~~~--~~~l~~~~~~~~~~-- 108 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG-GLPNEEGATILAPGVWTAQD-IPAG--QEAQAEWTREQLLG-- 108 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS-CSSCTTSHHHHCCCEECGGG-CCTT--CHHHHHHHHHHHHT--
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC-CCCCcchhccCCcceeeccc-CCch--HHHHHHHHHHHHHH--
Confidence 458999999999999999999998667999999998 677778777777 45 2221 1121 34455666665554
Q ss_pred HhcC----CCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCc-------ccceeEecCCcccee
Q psy7710 134 DKRN----IPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYC-------KGVKAIHSPNTGIVD 202 (473)
Q Consensus 134 ~~~~----~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~-------~~~~~~~~~~~~~~~ 202 (473)
..+ ..+...|.+....... ..+ +++..++...+|.+ ...++++.+..+.++
T Consensus 109 -~~~~~~~~~~~~~g~l~~~~~~~------------~~g-----~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~ 170 (405)
T 3c4n_A 109 -ALGSGKTLEVEDRPLLHLLPAGE------------GSG-----LTPTLDALADFPEALALLDPARLPVARVDPRALTYR 170 (405)
T ss_dssp -GGGSSCCCCEEECCEEEEESSCC------------SSS-----CEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEEC
T ss_pred -HhCCCCCCcEEeeCeEEehhhHh------------HCC-----CCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEc
Confidence 233 3456666665432210 011 44555554444432 236788999999999
Q ss_pred HHHHHHHHHHHHHHcCcEEEeCceEE---------EEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHH-hcCCCCC
Q psy7710 203 WGLVTRVMGEEFCELGGEIRLNQQVE---------SFKENPESVTISTKQGDHLESSYALVCAGLQADEMAL-KSGCSLE 272 (473)
Q Consensus 203 ~~~~~~~l~~~~~~~Gv~i~~~~~V~---------~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~-~~g~~~~ 272 (473)
+..++..|.+.+++.|++++++++|+ +|..+++.+.|++.+| +++||.||+|+|.|+..|++ .+|+..
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~~~- 248 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGLHT- 248 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCCCC-
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcCCCC-
Confidence 99999999999999999999999999 8877767777888887 89999999999999988988 888764
Q ss_pred CceeeeeeEEEEeCcCcccCcccccccCCCCCCCccEEEEecCCCCeEEECCCccccccccCcccccchhHHHhhhccCC
Q psy7710 273 PAIVPFRGEYLLLNPAKQHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYP 352 (473)
Q Consensus 273 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (473)
++.|.+||++.+..+.. .....++ ..++|++|+.+|.+++|++.... ..+++....++. ..+..
T Consensus 249 -~~~~~~g~~~~~~~~~~-~~~~~~~--------~~~~y~~p~~~g~~~~G~t~~~~--~~~~~~~~~~~~----~~~~~ 312 (405)
T 3c4n_A 249 -RHGRAYRQFPRLDLLSG-AQTPVLR--------ASGLTLRPQNGGYTLVPAIHHRD--PHGYHPAGGSLT----GVPTG 312 (405)
T ss_dssp -CCEEEEEECCEECSCCC-TTCCEEE--------ETTEEEEEETTEEEEECCCCSCB--CSSCCCCCCCBT----TBCCS
T ss_pred -CcccceeEEEEECCCCc-cCCCeEE--------CCcEEEEEcCCCeEEEecccccc--ccCcCccccccc----ccccC
Confidence 68999999988865321 1111111 12579999988889999874211 011110000000 00000
Q ss_pred cchhccchhhhhchHHHHhhhcchhHHHHHhhcccCCCCCC---------cccCCCeeceEeeCCCCccc-----cccce
Q psy7710 353 GFWRLGLKYTRYGSKEMIMSWFPSMRVNELKQYIEEIEAGD---------IQRGPSGVRAQALSSSGDLV-----DDFGV 418 (473)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~---------i~~~w~G~rp~~~t~d~~p~-----~g~~~ 418 (473)
...+. .+.+.+. .++||.+.+.+ +.+.|+|+||+ |+|+.|+ .|+|+
T Consensus 313 ------------~~~~~-----~~~l~~~-~~~~P~l~~~~~~~~r~~~~i~~~w~G~r~~--t~D~~P~ig~~~~gl~~ 372 (405)
T 3c4n_A 313 ------------LRREL-----LEDLVGL-MDAVPALAGEGLELGRSSADVPGAWLALPGG--RPDAPPQAEELAPGLHL 372 (405)
T ss_dssp ------------SCHHH-----HHHHHHH-TTTCGGGGSSCBCCCSSGGGSCEEEEEEGGG--CTTCCCEEEEEETTEEE
T ss_pred ------------CCHHH-----HHHHHHH-HHhCCCccccCccccccccceeeEEEeecCc--CCCCCCEecccCCCeEE
Confidence 01111 2233333 48999988765 88999999998 7999997 37899
Q ss_pred eeeecCCccccchHHHHHHHHHHHHhh
Q psy7710 419 KAIHSPHTGIVDWGLVTRVMGEEFCEL 445 (473)
Q Consensus 419 ~~g~~~~~gi~~~~~~a~~~g~~~~~~ 445 (473)
++||+++ + .++|.+|+.++++
T Consensus 373 a~G~~g~--~----~~ap~~a~~la~~ 393 (405)
T 3c4n_A 373 LLGGPLA--D----TLGLAAAHELAQR 393 (405)
T ss_dssp EECCTTH--H----HHHHHHHHHHHHH
T ss_pred EEccCcH--H----HHHHHHHHHHHHH
Confidence 9998653 2 3455555555443
No 18
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.97 E-value=9e-32 Score=261.34 Aligned_cols=309 Identities=17% Similarity=0.122 Sum_probs=208.6
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCccc-----CCCcceEEeeccCCCchhHHHHHHHhHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQT-----GHNSGVVHAGIYYKPGTLKAKLCVEGMNLAY 130 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (473)
.++||+|||||++|+++|++|+++ |.+|+|||+. .++.++| ..+.+.+.+............+...+.+.+.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~--G~~V~vle~~-~~~~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARK--GYSVHILARD-LPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWV 81 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESS-CTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCEEEEEecc-CCCCcCCcCcccCcccccccCcccCCCchHHHHHHHHHHHHHH
Confidence 568999999999999999999999 9999999998 5766533 3344444332211123445567777777777
Q ss_pred HHHHh-cCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHH
Q psy7710 131 EYFDK-RNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRV 209 (473)
Q Consensus 131 ~~~~~-~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 209 (473)
++..+ .++ ...+.+.+...+.. . ..+.+.+.+. .+++++.+++ | ....+++. .++.++|..++..
T Consensus 82 ~~~~~~~g~--~~~~~~~~~~~~~~-~---~~~~~~~~g~-~~~~l~~~~~----p--~~~~g~~~-~~~~v~p~~~~~~ 147 (363)
T 1c0p_A 82 ELVPTGHAM--WLKGTRRFAQNEDG-L---LGHWYKDITP-NYRPLPSSEC----P--PGAIGVTY-DTLSVHAPKYCQY 147 (363)
T ss_dssp HHTTTTSSE--EEEEEEEEESSGGG-G---GGGTTTTTST-TCEECCGGGS----S--TTCEEEEE-EEEECCHHHHHHH
T ss_pred HhCcccCCe--EEECCEEEEecCcc-c---hhHHHHHhCC-CcEECCHHHC----C--CceEEEEE-ecceecHHHHHHH
Confidence 77544 333 23334444432211 1 1122234455 5677777654 3 12245555 7788999999999
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeeeeEEEEeCcCc
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFRGEYLLLNPAK 289 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~g~~~~~~~~~ 289 (473)
|.+.++++|++|+. ++|++|..+ . + +||.||+|+|.|+..++.. .+.++.|+|||++.++++.
T Consensus 148 l~~~~~~~G~~i~~-~~v~~l~~~------~-----~-~a~~VV~A~G~~s~~l~~~----~~~~~~p~rg~~~~~~~~~ 210 (363)
T 1c0p_A 148 LARELQKLGATFER-RTVTSLEQA------F-----D-GADLVVNATGLGAKSIAGI----DDQAAEPIRGQTVLVKSPC 210 (363)
T ss_dssp HHHHHHHTTCEEEE-CCCSBGGGT------C-----S-SCSEEEECCGGGGGTSBTT----CCTTEEEEEEEEEEEECCC
T ss_pred HHHHHHHCCCEEEE-EEcccHhhc------C-----c-CCCEEEECCCcchhhccCc----ccCCccccCCeEEEEeCCc
Confidence 99999999999998 999887543 1 2 7899999999999876643 2458999999999987654
Q ss_pred ccCcccccccCCCCCCCccEEEEecCCCCeEEECCCccccccccCcccccchhHHHhhhccCCcchhccchhhhhchHHH
Q psy7710 290 QHLVRGNIYPVPDPNFPFLGVHFTPRMDGSVWLGPNAVLAFKKEGYRWRDFSVRELFSTLRYPGFWRLGLKYTRYGSKEM 369 (473)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (473)
. ... ++... . ..+.|++|+.+|++++|++.+.. +++. ..+.+
T Consensus 211 ~--~~~--~~~~~--~-~~~~y~~p~~~g~~~iG~t~~~~----~~~~-~~~~~-------------------------- 252 (363)
T 1c0p_A 211 K--RCT--MDSSD--P-ASPAYIIPRPGGEVICGGTYGVG----DWDL-SVNPE-------------------------- 252 (363)
T ss_dssp C--CCE--EECSC--T-TCCEEEEEETTTEEEEECCCEET----CCCC-SCCHH--------------------------
T ss_pred c--cce--Eeecc--C-CCcEEEEEcCCCEEEEEeeeccC----CCCC-CCCHH--------------------------
Confidence 1 111 11111 1 12489999989999999986532 1111 00110
Q ss_pred HhhhcchhHHHHHhhcccCC------CCCCcccCCCeeceEeeCCCCccc------------------------------
Q psy7710 370 IMSWFPSMRVNELKQYIEEI------EAGDIQRGPSGVRAQALSSSGDLV------------------------------ 413 (473)
Q Consensus 370 ~~~~~~~~~~~~~~~~~P~l------~~~~i~~~w~G~rp~~~t~d~~p~------------------------------ 413 (473)
..+.+++.+.+++|.+ .+.++++.|+|+||+ |+|+.|+
T Consensus 253 ----~~~~l~~~~~~~~P~l~~~~~~~~~~i~~~w~G~rp~--t~d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~ 326 (363)
T 1c0p_A 253 ----TVQRILKHCLRLDPTISSDGTIEGIEVLRHNVGLRPA--RRGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKE 326 (363)
T ss_dssp ----HHHHHHHHHHHHCGGGSSSSSGGGCEEEEEEEEEEEE--ETTSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEE
T ss_pred ----HHHHHHHHHHHhCccccCCcccccceEeeceEEECCC--CCCCceeEEEecccccccccCcccccccccccccccc
Confidence 1345669999999998 557899999999998 7899886
Q ss_pred cccceeeeecCCccccchHHHHHHHHHHHH
Q psy7710 414 DDFGVKAIHSPHTGIVDWGLVTRVMGEEFC 443 (473)
Q Consensus 414 ~g~~~~~g~~~~~gi~~~~~~a~~~g~~~~ 443 (473)
.|+|+++||++| |+..++.+|..+++++.
T Consensus 327 ~~~~~a~G~~g~-G~~~a~~~g~~~a~li~ 355 (363)
T 1c0p_A 327 VTLVHAYGFSSA-GYQQSWGAAEDVAQLVD 355 (363)
T ss_dssp EEEEEEECCTTC-HHHHHHHHHHHHHHHHH
T ss_pred ceEEEecCCCCc-chheeccHHHHHHHHHH
Confidence 357889998876 57555556666665554
No 19
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.97 E-value=2.5e-29 Score=256.25 Aligned_cols=309 Identities=16% Similarity=0.178 Sum_probs=197.4
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
.++||+|||||++|+++|+.|+++ |++|+|+|++ .+++++|+++.++++.+..|... ....+..........+.+.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~--G~~V~LlEk~-d~~~GtS~~ss~lihgG~ryl~~-~~~~l~~e~~~e~~~l~~~ 92 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVR--GIQTGLVEMN-DFASGTSSRSTKLVHGGLRYLKQ-FEIKLVAEVGKERAIVYEN 92 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTT--TCCEEEEESS-STTCSGGGSSCCEECC----------------CHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCcEEEEECC-CCCCCcccCCcCccccchHHHHh-cCHHHHHHHHHHHHHHHHh
Confidence 469999999999999999999999 9999999999 78999999999999988765332 1112222222222222222
Q ss_pred cCCCCcccCeEEEEeCc-Chh-----hHHHHHHHHHh-CCCCcceeeCHHHHHhhcCCccc---ceeEecCCccceeHHH
Q psy7710 136 RNIPYKKCGKLIVALNE-QLE-----PLHDLYERSIQ-NNVKDVRLVSAEEIKTIEPYCKG---VKAIHSPNTGIVDWGL 205 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~-~~~-----~~~~~~~~~~~-~g~~~~~~l~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~ 205 (473)
...-......+...... ... .....+..+.. ......++++..++...+|.+.. .++++.+ ++.+++..
T Consensus 93 ap~l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~~~-dg~vd~~~ 171 (561)
T 3da1_A 93 APHVTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGGIYV-EYRTDDAR 171 (561)
T ss_dssp CTTTCEEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEEEEE-EEECCHHH
T ss_pred CchhccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEEEec-CceEcHHH
Confidence 21101111111111110 000 00011111110 11225678999999999997753 3455555 56899999
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeE-EEEcCC---C--cEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeee
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESV-TISTKQ---G--DHLESSYALVCAGLQADEMALKSGCSLEPAIVPFR 279 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~---g--~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~ 279 (473)
++..|.+.+++.|++|+++++|++|..+++++ .|++.+ | .+++||.||+|+|.|+..+.+++|+....++.|.|
T Consensus 172 l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~~~~~v~p~k 251 (561)
T 3da1_A 172 LTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSKHGKYLKLSK 251 (561)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCCCSSEEEEEE
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCCCCceEEecc
Confidence 99999999999999999999999999887764 355432 3 47899999999999999999999886556899999
Q ss_pred eEEEEeCcCcccCcccccccC-CCCCCCccEEEEecCCCCeEEECCCcccc-ccccCcccccchhHHHhhhccCCcchhc
Q psy7710 280 GEYLLLNPAKQHLVRGNIYPV-PDPNFPFLGVHFTPRMDGSVWLGPNAVLA-FKKEGYRWRDFSVRELFSTLRYPGFWRL 357 (473)
Q Consensus 280 g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~g~~~iG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (473)
|+++.++..........+++. ++ ...+|+.|. +|.+++|+|.+.. .+..+.. .+
T Consensus 252 G~~lvl~~~~~~~~~~~~~~~~~d----gr~v~~iP~-~g~~~iGtT~~~~~~~~~~~~---~t---------------- 307 (561)
T 3da1_A 252 GVHLVVDQSRFPLRQAVYFDTESD----GRMIFAIPR-EGKTYIGTTDTFYDKDIASPR---MT---------------- 307 (561)
T ss_dssp EEEEEEEGGGSCCSSEEEECCSSS----CCCEEEEEE-TTEEEECCCCEEECSCTTCCC---CC----------------
T ss_pred EEEEEECCccCCCceEEEeccCCC----CcEEEEEec-CCCEEEcCCCCccCCCcCCCC---CC----------------
Confidence 999998754221111122232 11 224789998 7899999996531 1111100 01
Q ss_pred cchhhhhchHHHHhhhcchhHHHHHhhcccCCC--CCCcccCCCeeceEeeC
Q psy7710 358 GLKYTRYGSKEMIMSWFPSMRVNELKQYIEEIE--AGDIQRGPSGVRAQALS 407 (473)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~--~~~i~~~w~G~rp~~~t 407 (473)
.++ ++.+++.+.++||.+. ..+|+..|+|+||.+.+
T Consensus 308 -----~~~---------i~~ll~~~~~~~P~l~~~~~~v~~~~aGlRPl~~~ 345 (561)
T 3da1_A 308 -----VED---------RDYILAAANYMFPSLRLTADDVESSWAGLRPLIHE 345 (561)
T ss_dssp -----HHH---------HHHHHHHHHHHCTTCCCCTTTEEEEEEEEEEEEEC
T ss_pred -----HHH---------HHHHHHHHHHhCCCCCCChhhEEEEeEEeccccCC
Confidence 111 3456799999999987 78999999999998644
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.65 E-value=7.1e-15 Score=143.91 Aligned_cols=159 Identities=14% Similarity=0.194 Sum_probs=102.1
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHhc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDKR 136 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (473)
++||+|||||++|+++|+.|+++ |.+|+|+|+.+.++. +...++.+.. ++.+++
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~--G~~V~l~E~~~~~g~--~~~~~~~~~~----------------------~~~~~l 57 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY--GLKTLMIEKRPEIGS--PVRCGEGLSK----------------------GILNEA 57 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSTTC--SCCSCCEEET----------------------HHHHHT
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCCCCC--CcccccccCH----------------------HHHHHc
Confidence 58999999999999999999999 999999999854432 1222222211 112222
Q ss_pred CCCCc------ccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHH
Q psy7710 137 NIPYK------KCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVM 210 (473)
Q Consensus 137 ~~~~~------~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 210 (473)
++... ....+.+.... +. ....++... ...+....++...+.+.|
T Consensus 58 g~~~~~~~~~~~~~~~~~~~~~---------------~~-~~~~~~~~~-------------~~~~~~~~~~~~~l~~~L 108 (397)
T 3cgv_A 58 DIKADRSFIANEVKGARIYGPS---------------EK-RPIILQSEK-------------AGNEVGYVLERDKFDKHL 108 (397)
T ss_dssp TCCCCTTTEEEEESEEEEECTT---------------CS-SCEEEC------------------CCCEEEECHHHHHHHH
T ss_pred CCCCChHHhhhhcceEEEEcCC---------------CC-EEEEEeccc-------------cCCceeEEEeHHHHHHHH
Confidence 32110 00011111000 00 000011100 001223357788899999
Q ss_pred HHHHHHcCcEEEeCceEEEEEEcCCeEE-EEc---CCCcEEEcCEEEEcCCcChHHHHHhcCCCC
Q psy7710 211 GEEFCELGGEIRLNQQVESFKENPESVT-IST---KQGDHLESSYALVCAGLQADEMALKSGCSL 271 (473)
Q Consensus 211 ~~~~~~~Gv~i~~~~~V~~i~~~~~~v~-v~~---~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~ 271 (473)
.+.+++.|++|+++++|+++..+++.+. |++ .++.+++||.||.|+|.+| .+.+.+|++.
T Consensus 109 ~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s-~~~~~~g~~~ 172 (397)
T 3cgv_A 109 AALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES-EFGRWAGLKS 172 (397)
T ss_dssp HHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC-HHHHHHTCCT
T ss_pred HHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch-HhHHhcCCCc
Confidence 9999999999999999999998887765 665 3456899999999999999 7778888764
No 21
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.60 E-value=1.7e-14 Score=141.10 Aligned_cols=165 Identities=16% Similarity=0.223 Sum_probs=105.3
Q ss_pred CCcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcc-eEEeeccCCC--------chhHHHHHHHh
Q psy7710 55 PALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSG-VVHAGIYYKP--------GTLKAKLCVEG 125 (473)
Q Consensus 55 ~~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g-~~~~~~~~~~--------~~~~~~~~~~~ 125 (473)
..++||+|||||++|+++|+.|+++ |.+|+|+|+.+.+++.......| +........+ ......+....
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~--G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKR--GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYR 102 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcC
Confidence 3568999999999999999999999 99999999997665322100011 1111100001 00111111111
Q ss_pred HHHHHHHHHhcCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHH
Q psy7710 126 MNLAYEYFDKRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGL 205 (473)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 205 (473)
.......+...|+ ...... .+.++ + ......
T Consensus 103 -------------------------------~~~~~~~~~~~Gi-~~~~~~-------------~g~~~-~---~~~~~~ 133 (417)
T 3v76_A 103 -------------------------------PQDFVALVERHGI-GWHEKT-------------LGQLF-C---DHSAKD 133 (417)
T ss_dssp -------------------------------HHHHHHHHHHTTC-CEEECS-------------TTEEE-E---SSCHHH
T ss_pred -------------------------------HHHHHHHHHHcCC-CcEEee-------------CCEEe-e---CCCHHH
Confidence 1122223333343 111100 11112 1 234567
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh----------HHHHHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA----------DEMALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s----------~~l~~~~g~~~ 271 (473)
+.+.|.+.+++.|++|+++++|++|..+++++.|++.+| +++||.||+|+|.+| ..+++.+|+.+
T Consensus 134 l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~i 208 (417)
T 3v76_A 134 IIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKSIPKMGATGLAYRIAEQFGLPV 208 (417)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCCE
Confidence 888999999999999999999999998888899999988 999999999999997 57888888763
No 22
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.58 E-value=1.4e-14 Score=143.83 Aligned_cols=178 Identities=20% Similarity=0.254 Sum_probs=106.1
Q ss_pred CCCcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHH
Q psy7710 54 SPALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYF 133 (473)
Q Consensus 54 ~~~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (473)
...++||+|||||++|+++|+.|+++ |.+|+|||+.+.+++. +..+++.......... . .++.
T Consensus 23 ~~~~~dVvIIGgG~aGl~aA~~la~~--G~~V~llEk~~~~g~~-~~~sg~g~~~~~~~~~--~------------~~~~ 85 (447)
T 2i0z_A 23 NAMHYDVIVIGGGPSGLMAAIGAAEE--GANVLLLDKGNKLGRK-LAISGGGRCNVTNRLP--L------------DEIV 85 (447)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHH-HHHTGGGTCCCEECSC--H------------HHHH
T ss_pred ccCCCCEEEECCcHHHHHHHHHHHHC--CCCEEEEECCCCCCce-eEEeCCCceeccCccc--H------------HHHH
Confidence 34568999999999999999999999 8999999998655432 1111110000000000 0 0011
Q ss_pred HhcCCCCcccCeEEEEeCc-ChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHH
Q psy7710 134 DKRNIPYKKCGKLIVALNE-QLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGE 212 (473)
Q Consensus 134 ~~~~~~~~~~g~l~~~~~~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (473)
..+... +.+. ... ......+..+++...|+ ...... .+.++ |.. .....+.+.|.+
T Consensus 86 ~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~G~-~~~~~~-------------~g~~~-p~~--~~~~~l~~~L~~ 142 (447)
T 2i0z_A 86 KHIPGN----GRFL--YSAFSIFNNEDIITFFENLGV-KLKEED-------------HGRMF-PVS--NKAQSVVDALLT 142 (447)
T ss_dssp HTCTBT----GGGG--HHHHHHSCHHHHHHHHHHTTC-CEEECG-------------GGEEE-ETT--CCHHHHHHHHHH
T ss_pred HHhccC----hHHH--HHHHHhcCHHHHHHHHHhcCC-ceEEee-------------CCEEE-CCC--CCHHHHHHHHHH
Confidence 111000 0000 000 00001122333444454 221100 11111 111 134778899999
Q ss_pred HHHHcCcEEEeCceEEEEEEcCCe-EEEEcCCCcEEEcCEEEEcCCcCh----------HHHHHhcCCCC
Q psy7710 213 EFCELGGEIRLNQQVESFKENPES-VTISTKQGDHLESSYALVCAGLQA----------DEMALKSGCSL 271 (473)
Q Consensus 213 ~~~~~Gv~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~ad~VV~aaG~~s----------~~l~~~~g~~~ 271 (473)
.+++.|++|+++++|++|..+++. +.|++.+|.+++||.||+|+|+++ ..+++.+|++.
T Consensus 143 ~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~~ 212 (447)
T 2i0z_A 143 RLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHTI 212 (447)
T ss_dssp HHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCCE
T ss_pred HHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCCc
Confidence 999999999999999999977766 778888886699999999999998 68889998763
No 23
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.57 E-value=5.2e-14 Score=137.57 Aligned_cols=164 Identities=16% Similarity=0.242 Sum_probs=97.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
++|||+|||||++|+++|+.|+++ |++|+|+||.+.++.. ...++.+.+. ..++
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~--G~~V~v~Er~~~~~~~--~~~g~~l~~~----------------------~l~~ 56 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKY--GLKTLMIEKRPEIGSP--VRCGEGLSKG----------------------ILNE 56 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSTTCS--CCSCCEEETH----------------------HHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCCCCCC--CceecccCHH----------------------HHHH
Confidence 359999999999999999999999 9999999998665432 1222333211 1122
Q ss_pred cCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhh-cCCcccceeEecCCccceeHHHHHHHHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTI-EPYCKGVKAIHSPNTGIVDWGLVTRVMGEEF 214 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 214 (473)
+++...... +..... ...+......... .+... ........++...+...|.+.+
T Consensus 57 l~~~~~~~~-~~~~~~-------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~R~~~~~~L~~~a 112 (397)
T 3oz2_A 57 ADIKADRSF-IANEVK-------------------GARIYGPSEKRPIILQSEK----AGNEVGYVLERDKFDKHLAALA 112 (397)
T ss_dssp TTCCCCTTT-EEEEES-------------------EEEEECTTCSSCEEEECSS----SSCCCEEEECHHHHHHHHHHHH
T ss_pred cCCCchhhh-hhcccc-------------------eEEEEeCCCceEeeccccc----cCCceeEEEEHHHHHHHHHHHH
Confidence 222111000 000000 0111111000000 00000 0001112456678888999999
Q ss_pred HHcCcEEEeCceEEEEEEcCCeEE-EEc-CCC--cEEEcCEEEEcCCcChHHHHHhcCCC
Q psy7710 215 CELGGEIRLNQQVESFKENPESVT-IST-KQG--DHLESSYALVCAGLQADEMALKSGCS 270 (473)
Q Consensus 215 ~~~Gv~i~~~~~V~~i~~~~~~v~-v~~-~~g--~~i~ad~VV~aaG~~s~~l~~~~g~~ 270 (473)
.+.|++++++++|+++..+++.+. +.. .++ .+++||.||.|.|.+| .+.+.+|+.
T Consensus 113 ~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S-~vr~~~g~~ 171 (397)
T 3oz2_A 113 AKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES-EFGRWAGLK 171 (397)
T ss_dssp HHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC-HHHHHHTCG
T ss_pred HhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcccc-HHHHHcCCC
Confidence 999999999999999988877654 221 222 4689999999999998 467777765
No 24
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.55 E-value=2.6e-13 Score=133.91 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=61.5
Q ss_pred cceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeE--EEEcCCCc--EEEcCEEEEcCCcChHHHHHhcCCCC
Q psy7710 199 GIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESV--TISTKQGD--HLESSYALVCAGLQADEMALKSGCSL 271 (473)
Q Consensus 199 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v--~v~~~~g~--~i~ad~VV~aaG~~s~~l~~~~g~~~ 271 (473)
..+++..+...|.+.+++.|++|+++++|+++..+++++ .+++.+|. +++||.||.|+|.++ .+.+.+|++.
T Consensus 101 ~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s-~l~~~~g~~~ 176 (421)
T 3nix_A 101 WQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR-VIPRMFGLDK 176 (421)
T ss_dssp EECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC-HHHHHTTCEE
T ss_pred eEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch-hhHHhcCCCC
Confidence 357788999999999999999999999999999877654 56778885 699999999999998 6778888764
No 25
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.53 E-value=1.3e-13 Score=134.57 Aligned_cols=163 Identities=13% Similarity=0.196 Sum_probs=105.0
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcc---eEEeecc------CCCchhHHHHHHHhHH
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSG---VVHAGIY------YKPGTLKAKLCVEGMN 127 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g---~~~~~~~------~~~~~~~~~~~~~~~~ 127 (473)
++||+|||||++|+++|+.|+++ |.+|+|+|+.+.+|+.......| ..+.+.. ..+......+...
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~--G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~--- 78 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL--GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARY--- 78 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHS---
T ss_pred CCCEEEECCcHHHHHHHHHHHhC--CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhC---
Confidence 58999999999999999999999 99999999986564321100000 1111100 0000000000000
Q ss_pred HHHHHHHhcCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHH
Q psy7710 128 LAYEYFDKRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVT 207 (473)
Q Consensus 128 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 207 (473)
......+.+...|+ .....+ .+.++ |.. ++..+.
T Consensus 79 ----------------------------~~~~~~~~~~~~Gi-~~~~~~-------------~g~~~-p~~---~~~~l~ 112 (401)
T 2gqf_A 79 ----------------------------TNWDFISLVAEQGI-TYHEKE-------------LGQLF-CDE---GAEQIV 112 (401)
T ss_dssp ----------------------------CHHHHHHHHHHTTC-CEEECS-------------TTEEE-ETT---CTHHHH
T ss_pred ----------------------------CHHHHHHHHHhCCC-ceEECc-------------CCEEc-cCC---CHHHHH
Confidence 01122334444555 222110 11122 221 567788
Q ss_pred HHHHHHHHHcCcEEEeCceEEEEEEc----CCeEEEEcCCCcEEEcCEEEEcCCcCh----------HHHHHhcCCCC
Q psy7710 208 RVMGEEFCELGGEIRLNQQVESFKEN----PESVTISTKQGDHLESSYALVCAGLQA----------DEMALKSGCSL 271 (473)
Q Consensus 208 ~~l~~~~~~~Gv~i~~~~~V~~i~~~----~~~v~v~~~~g~~i~ad~VV~aaG~~s----------~~l~~~~g~~~ 271 (473)
+.|.+.+++.|++++++++|+++..+ ++.+.|++.++ +++||.||+|+|.++ ..+++.+|++.
T Consensus 113 ~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i 189 (401)
T 2gqf_A 113 EMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPV 189 (401)
T ss_dssp HHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCccCCCCCCChHHHHHHHHCCCCc
Confidence 89999999999999999999999976 56688888887 899999999999997 47888888764
No 26
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.53 E-value=3e-13 Score=138.23 Aligned_cols=191 Identities=16% Similarity=0.095 Sum_probs=111.4
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHH-HHhHH-HHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLC-VEGMN-LAYEYF 133 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~ 133 (473)
.++||+|||||++|+++|+.|+++ |.+|+||||.+.+ ++.|..+.|.+..... .....+. ..+.+ .+.++.
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~--G~~V~vlEk~~~~-gg~s~~s~gg~~~~~~----~~~~~~g~~ds~~~~~~~~~ 192 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKA--GANVILVDKAPFS-GGNSMISAGGMNAVGT----KQQTAHGVEDKVEWFIEDAM 192 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH--TCCEEEECSSSSS-CTTGGGCCSCEECSSC----HHHHHTTCCCCHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCC-CCcccccCceeEccCC----HHHHHhCCCCCHHHHHHHHH
Confidence 568999999999999999999999 9999999999544 5666666665543211 0000000 00111 111111
Q ss_pred HhcCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHH
Q psy7710 134 DKRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEE 213 (473)
Q Consensus 134 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 213 (473)
+. +........+. .-.+.....++++...|+ .+..+. .... ......+.+.++.+.+..+...|.+.
T Consensus 193 ~~-~~~~~~~~~~~----~~~~~~~~~i~~l~~~Gv-~~~~~~------~~~g-~~~~r~~~~~~~~~~~~~l~~~L~~~ 259 (566)
T 1qo8_A 193 KG-GRQQNDIKLVT----ILAEQSADGVQWLESLGA-NLDDLK------RSGG-ARVDRTHRPHGGKSSGPEIIDTLRKA 259 (566)
T ss_dssp HH-TTTCSCHHHHH----HHHHHHHHHHHHHHHTTC-CCCEEE------CCTT-CSSCCEEECSSSSCHHHHHHHHHHHH
T ss_pred Hh-cCCCCCHHHHH----HHHhccHHHHHHHHhcCC-cccccc------ccCC-CCCCceeecCCCCCCHHHHHHHHHHH
Confidence 11 10000000000 000112233445555665 332211 0000 01122344555556788899999999
Q ss_pred HHHcCcEEEeCceEEEEEEcC-CeE---EEEcCCCc--EEEcCEEEEcCCcChH--HHHHh
Q psy7710 214 FCELGGEIRLNQQVESFKENP-ESV---TISTKQGD--HLESSYALVCAGLQAD--EMALK 266 (473)
Q Consensus 214 ~~~~Gv~i~~~~~V~~i~~~~-~~v---~v~~~~g~--~i~ad~VV~aaG~~s~--~l~~~ 266 (473)
+++.|++|+++++|++|..++ +.+ .+.+.+|. +++||.||+|+|+++. ++++.
T Consensus 260 ~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~~~ 320 (566)
T 1qo8_A 260 AKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMIAY 320 (566)
T ss_dssp HHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHHHH
T ss_pred HHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHHHH
Confidence 999999999999999999877 643 34444664 6899999999999963 44443
No 27
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.49 E-value=1.2e-12 Score=128.41 Aligned_cols=69 Identities=14% Similarity=0.230 Sum_probs=58.1
Q ss_pred cceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhc-CCC
Q psy7710 199 GIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKS-GCS 270 (473)
Q Consensus 199 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~-g~~ 270 (473)
..++...+.+.|.+.+.+ ++|+++++|+++..+++++.|++.+|.+++||.||.|+|.+|. +.+.+ |..
T Consensus 122 ~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~-vr~~l~~~~ 191 (407)
T 3rp8_A 122 CPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSA-LRPWVLGFT 191 (407)
T ss_dssp EEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCS-SHHHHHSSC
T ss_pred EEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChH-HHHHhcCCC
Confidence 356778888999988876 8999999999999999999999999888999999999999974 33444 654
No 28
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.48 E-value=1.6e-12 Score=132.18 Aligned_cols=71 Identities=17% Similarity=0.253 Sum_probs=62.1
Q ss_pred ceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCC----eEEEEcCCC---cEEEcCEEEEcCCcChHHHHHhcCCCC
Q psy7710 200 IVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPE----SVTISTKQG---DHLESSYALVCAGLQADEMALKSGCSL 271 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~----~v~v~~~~g---~~i~ad~VV~aaG~~s~~l~~~~g~~~ 271 (473)
.++...+...|.+.+++.|++|+++++|+++..+++ ++.+++.++ .+++||+||.|+|.+| .+.+.+|++.
T Consensus 116 ~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S-~vR~~lgi~~ 193 (535)
T 3ihg_A 116 MLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS-LVRESLGIGR 193 (535)
T ss_dssp CCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC-HHHHHTTCCE
T ss_pred ccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc-hHHHHcCCCc
Confidence 567788999999999999999999999999998887 888776654 5899999999999998 7888998764
No 29
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.47 E-value=3.8e-13 Score=137.02 Aligned_cols=72 Identities=19% Similarity=0.364 Sum_probs=63.1
Q ss_pred cceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEc--CCC-cEEEcCEEEEcCCcChHHHHHhcCCCC
Q psy7710 199 GIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTIST--KQG-DHLESSYALVCAGLQADEMALKSGCSL 271 (473)
Q Consensus 199 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~--~~g-~~i~ad~VV~aaG~~s~~l~~~~g~~~ 271 (473)
..++...+.+.|.+.+++.|++|+++++|+++..+++++.|++ .+| .+++||+||.|+|.+| .+.+.+|++.
T Consensus 143 ~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S-~vR~~lGi~~ 217 (570)
T 3fmw_A 143 GLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRS-TVRRLAADRF 217 (570)
T ss_dssp BCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSC-HHHHHTTCCC
T ss_pred EEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc-hHHHHcCCCC
Confidence 3567788999999999999999999999999998888887776 677 6899999999999999 7888888875
No 30
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.47 E-value=6.6e-13 Score=131.15 Aligned_cols=60 Identities=13% Similarity=0.155 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEE-EEcCCCcEEEcCEEEEcCCcCh-HHHH
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQA-DEMA 264 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~-v~~~~g~~i~ad~VV~aaG~~s-~~l~ 264 (473)
..+.+.|.+.++++|++|+++++|++|..+++++. |+++ |.+++||.||+|+|.+. ..|+
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhc
Confidence 67899999999999999999999999998888776 7776 55899999999999984 3444
No 31
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.47 E-value=2.2e-12 Score=132.02 Aligned_cols=185 Identities=16% Similarity=0.113 Sum_probs=105.9
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHH-HHhH-HHHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLC-VEGM-NLAYEYF 133 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~ 133 (473)
.++||+|||||++|+++|+.|+++ |.+|+||||.+.+ ++.|..+.|.+.... ......+. ..+. ..+.++.
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~--G~~V~vlEk~~~~-gg~s~~a~gg~~~~~----~~~~~~~g~~ds~~~~~~~~~ 197 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDS--GAKVILIEKEPVI-GGNAKLAAGGMNAAW----TDQQKAKKITDSPELMFEDTM 197 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS-CTTGGGCCSCEECSS----CHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCCCC-CCchhhcCceEEeCC----CHHHHHhCCCCCHHHHHHHHH
Confidence 468999999999999999999999 9999999999544 455555555543221 00000000 0001 1111111
Q ss_pred HhcCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHH
Q psy7710 134 DKRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEE 213 (473)
Q Consensus 134 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 213 (473)
+........ ..+. .-.+.....++++...|+ .+..+. .... ......+.+.++...+..+...|.+.
T Consensus 198 ~~g~~~~~~-~~~~----~~~~~~~~~~~~l~~~Gv-~~~~~~------~~~g-~~~~r~~~~~~g~~~g~~l~~~L~~~ 264 (571)
T 1y0p_A 198 KGGQNINDP-ALVK----VLSSHSKDSVDWMTAMGA-DLTDVG------MMGG-ASVNRAHRPTGGAGVGAHVVQVLYDN 264 (571)
T ss_dssp HHTTTCSCH-HHHH----HHHHHHHHHHHHHHHTTC-CCCEEE------CCTT-CSSCCEEESTTTCCHHHHHHHHHHHH
T ss_pred HhcCCCCCH-HHHH----HHHHccHHHHHHHHhcCC-CCccCc------ccCC-cCCCeeEecCCCCCCHHHHHHHHHHH
Confidence 110000000 0000 000111233444555555 222110 0000 01222344445556678899999999
Q ss_pred HHHcCcEEEeCceEEEEEEcC-CeE---EEEcCCCc--EEEcCEEEEcCCcCh
Q psy7710 214 FCELGGEIRLNQQVESFKENP-ESV---TISTKQGD--HLESSYALVCAGLQA 260 (473)
Q Consensus 214 ~~~~Gv~i~~~~~V~~i~~~~-~~v---~v~~~~g~--~i~ad~VV~aaG~~s 260 (473)
+++.|++|+++++|++|..++ +.+ .+.+.+|. +++||.||+|+|+++
T Consensus 265 ~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 265 AVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 999999999999999999876 543 34443564 689999999999986
No 32
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.46 E-value=3.4e-13 Score=133.06 Aligned_cols=64 Identities=14% Similarity=0.136 Sum_probs=53.2
Q ss_pred eEecCCccceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 192 AIHSPNTGIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.+.+..| +..+.+.|.+.++++|++|+++++|++|..+++++ |.++ |.+++||.||+|+|.+.
T Consensus 180 g~~~~~gG---~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V~~~-g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 180 GPGLIRGG---CKAVIDELERIIMENKGKILTRKEVVEINIEEKKV-YTRD-NEEYSFDVAISNVGVRE 243 (421)
T ss_dssp SCEEETTC---HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-EETT-CCEEECSEEEECSCHHH
T ss_pred CcceecCC---HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-EEeC-CcEEEeCEEEECCCHHH
Confidence 34444444 47889999999999999999999999999888888 7654 55899999999999983
No 33
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.46 E-value=1.4e-12 Score=131.53 Aligned_cols=201 Identities=18% Similarity=0.122 Sum_probs=102.9
Q ss_pred CCcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHH-HHhHHHHHHHH
Q psy7710 55 PALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLC-VEGMNLAYEYF 133 (473)
Q Consensus 55 ~~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 133 (473)
+.++||+|||+|++|+++|+.|+++ |.+|+||||.+ ..+++|..+.|.++.... ......+. ..+.+.+.+..
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~--G~~V~vlEk~~-~~GG~s~~s~G~~~~~~~---~~~~~~~g~~ds~~~~~~~~ 112 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARA--GADVLVLERTS-GWGGATALAGGFIYLGGG---TPLQKACGFDDSPENMKTFM 112 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS-SSCTTGGGSCCCEECCSS---CHHHHHTTCCCCHHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCC-CCCCcchhcCcceecCCC---CHHHHHhCCCCCHHHHHHHH
Confidence 4679999999999999999999999 99999999995 445666667766543210 00000000 00011111111
Q ss_pred HhcCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceee--C---------------HHHHHhhcCCc-cc-ceeEe
Q psy7710 134 DKRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLV--S---------------AEEIKTIEPYC-KG-VKAIH 194 (473)
Q Consensus 134 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l--~---------------~~~~~~~~p~~-~~-~~~~~ 194 (473)
............+. .-.+...+.++++.+.|+ .+... . ..+....++.. .. ..+..
T Consensus 113 ~~~~~~~~~~~~~~----~~~~~~~~~i~~l~~~Gv-~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~ 187 (510)
T 4at0_A 113 MAALGPGADEEKIT----DYCEGSVEHYNWLVDCGV-PFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHV 187 (510)
T ss_dssp HHHSCSSCCHHHHH----HHHHTHHHHHHHHHHTTC-CCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEEC
T ss_pred HHHhCCCCCHHHHH----HHHHhhHHHHHHHHHcCC-eecccccCCcccccCCcccccccCcccccccccccCcccceee
Confidence 11000000000000 000111223334444444 11100 0 00000000000 00 00111
Q ss_pred cCC----ccceeHH-HHHHHHHHHHHHcCcEEEeCceEEEEEEc-CCeE-EEEcC-CC--cEEEcC-EEEEcCCcCh--H
Q psy7710 195 SPN----TGIVDWG-LVTRVMGEEFCELGGEIRLNQQVESFKEN-PESV-TISTK-QG--DHLESS-YALVCAGLQA--D 261 (473)
Q Consensus 195 ~~~----~~~~~~~-~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~-~g--~~i~ad-~VV~aaG~~s--~ 261 (473)
.+. .+..... .+...|.+.+++.|++|+++++|++|..+ ++.+ .|.+. ++ .+++|+ .||+|+|+++ .
T Consensus 188 ~~~~~~~~g~~~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~ 267 (510)
T 4at0_A 188 PQMDGKRTGEKGGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAYND 267 (510)
T ss_dssp CCCSSCBTTTBCTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTTCH
T ss_pred ecccccccccCCCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhhCH
Confidence 110 2223333 78999999999999999999999999987 4443 24332 23 258995 9999999995 3
Q ss_pred HHHHh
Q psy7710 262 EMALK 266 (473)
Q Consensus 262 ~l~~~ 266 (473)
++++.
T Consensus 268 ~m~~~ 272 (510)
T 4at0_A 268 KMIEA 272 (510)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 45443
No 34
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.46 E-value=2.5e-12 Score=129.80 Aligned_cols=57 Identities=21% Similarity=0.342 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEE-EEcCCCcEEEcCEEEEcCCcCh
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~-v~~~~g~~i~ad~VV~aaG~~s 260 (473)
..+.+.|.+.++++|++|+++++|++|..+++++. |++.+|++++||.||.+++.+.
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 67899999999999999999999999999888775 8999999999999999998873
No 35
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.45 E-value=1.7e-12 Score=130.51 Aligned_cols=173 Identities=18% Similarity=0.266 Sum_probs=108.0
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHH--
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYF-- 133 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 133 (473)
..+||+|||||++|+++|+.|++. |++|+|||+++.++... + .....|....
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~--G~kV~VlEr~~~~~~R~-----------------------~-~~~g~w~~~~~~ 159 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQM--GFNPIIVERGKEVRERT-----------------------K-DTFGFWRKRTLN 159 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHT--TCCCEEECSSCCHHHHH-----------------------H-HHHHHHHHCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCeEEEEEccCcccccc-----------------------c-chhccccccccc
Confidence 458999999999999999999999 99999999985443110 0 0000011000
Q ss_pred HhcCCCCc-------ccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHH
Q psy7710 134 DKRNIPYK-------KCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLV 206 (473)
Q Consensus 134 ~~~~~~~~-------~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 206 (473)
....+.+. ..+.+...............+.+..+|. ..+.+.. ..+..+......+
T Consensus 160 ~~~~i~~g~gGag~~sdgkl~~~i~~~~~~~~~v~~~~~~~G~-~~~i~~~----------------~~p~~G~~~~~~l 222 (549)
T 3nlc_A 160 PESNVQFGEGGAGTFSDGKLYSQVKDPNFYGRKVITEFVEAGA-PEEILYV----------------SKPHIGTFKLVTM 222 (549)
T ss_dssp TTSSSSSSTTGGGTTSCCCCCCCSCCTTCHHHHHHHHHHHTTC-CGGGGTB----------------SSCCCCHHHHHHH
T ss_pred ccccceeccCCcccccCCceEEEeccccccHHHHHHHHHHcCC-CceEeec----------------cccccccchHHHH
Confidence 00000010 1112211111111112334444555565 2221110 0233344556788
Q ss_pred HHHHHHHHHHcCcEEEeCceEEEEEEcCCeE-EEEcCCCcEEEcCEEEEcCCcChH---HHHHhcCCCC
Q psy7710 207 TRVMGEEFCELGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQAD---EMALKSGCSL 271 (473)
Q Consensus 207 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~ad~VV~aaG~~s~---~l~~~~g~~~ 271 (473)
...|.+.+++.|++|+++++|++|..+++.+ .|++.+|.+++||.||+|+|.++. .++...|+..
T Consensus 223 ~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~ 291 (549)
T 3nlc_A 223 IEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVYM 291 (549)
T ss_dssp HHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCCc
Confidence 9999999999999999999999999887654 488888878999999999999985 3566677653
No 36
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.45 E-value=2.7e-12 Score=128.99 Aligned_cols=71 Identities=20% Similarity=0.353 Sum_probs=60.8
Q ss_pred ceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCc---EEEcCEEEEcCCcChHHHHHhcCCCC
Q psy7710 200 IVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGD---HLESSYALVCAGLQADEMALKSGCSL 271 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~---~i~ad~VV~aaG~~s~~l~~~~g~~~ 271 (473)
.++...+.+.|.+.+++.|++|+++++|+++..+++++.|++.++. +++||+||.|.|.+| .+.+.+|++.
T Consensus 102 ~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S-~VR~~lg~~~ 175 (500)
T 2qa1_A 102 TVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS-SVRKAAGFDF 175 (500)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC-HHHHHTTCCC
T ss_pred ecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch-HHHHHcCCCc
Confidence 4566788899999999999999999999999998888887776553 799999999999998 4778888764
No 37
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.45 E-value=6.7e-12 Score=125.56 Aligned_cols=55 Identities=11% Similarity=0.168 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
..+.+.|.+.+.+ ++|+++++|++|..+++++.|++.+|.+++||.||+|++.+.
T Consensus 235 ~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 235 QTLVEEIEKQLKL--TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKA 289 (470)
T ss_dssp HHHHHHHHHTCCS--EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHH
T ss_pred HHHHHHHHHhcCC--CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHH
Confidence 3455555554432 799999999999998888999999987899999999999874
No 38
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.45 E-value=2.1e-12 Score=133.10 Aligned_cols=185 Identities=12% Similarity=0.133 Sum_probs=102.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCC---CchhHH---H---------
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYK---PGTLKA---K--------- 120 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~---~~~~~~---~--------- 120 (473)
.++||+|||||++|+++|++|+++ |.+|+||||....++.++...+|+........ .+.... .
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~--G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~ 81 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQK--GLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGC 81 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCS
T ss_pred ccccEEEECchHHHHHHHHHHHHC--CCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999 99999999985333344344444443221110 111110 0
Q ss_pred -------HHHHhHHHHHHHHHhcCCCCccc--CeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccce
Q psy7710 121 -------LCVEGMNLAYEYFDKRNIPYKKC--GKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVK 191 (473)
Q Consensus 121 -------~~~~~~~~~~~~~~~~~~~~~~~--g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~ 191 (473)
++..+.+.+ ++..+.+++|... |...+.. .+. ..++++++++..... ....+
T Consensus 82 d~~~v~~~~~~s~~~i-~~L~~~Gv~f~~~~~G~~~~~~----------------~g~-~~~~l~~~e~~~~~~-~~~~g 142 (660)
T 2bs2_A 82 DQKVARMFVNTAPKAI-RELAAWGVPWTRIHKGDRMAII----------------NAQ-KTTITEEDFRHGLIH-SRDFG 142 (660)
T ss_dssp CHHHHHHHHHHHHHHH-HHHHHTTCCCCBCCSEEEECCC----------------SSC-CCEEEECGGGTTSBC-CBCCT
T ss_pred CHHHHHHHHHHHHHHH-HHHHHcCCCceecCCCcccccc----------------ccc-ccccccchhhhhhhc-ccccc
Confidence 000011111 1112233333211 1100000 011 233444444433221 11122
Q ss_pred eEecCCcc---ceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeE---EEE-cCCCc--EEEcCEEEEcCCcChH
Q psy7710 192 AIHSPNTG---IVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESV---TIS-TKQGD--HLESSYALVCAGLQAD 261 (473)
Q Consensus 192 ~~~~~~~~---~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v---~v~-~~~g~--~i~ad~VV~aaG~~s~ 261 (473)
+...+... ...+..++..|.+.+++.|++|++++.|++|..+++.+ .+. +.+|. .++||.||+|||+++.
T Consensus 143 g~~~~R~~~~~d~tG~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 143 GTKKWRTCYTADATGHTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGR 221 (660)
T ss_dssp TCSSCCEECSTTCHHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGG
T ss_pred ccccceeEeeCCCCHHHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchh
Confidence 22222111 12256789999999999999999999999998766543 232 35664 4899999999999873
No 39
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.43 E-value=3.2e-12 Score=128.39 Aligned_cols=71 Identities=18% Similarity=0.299 Sum_probs=61.2
Q ss_pred ceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCc---EEEcCEEEEcCCcChHHHHHhcCCCC
Q psy7710 200 IVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGD---HLESSYALVCAGLQADEMALKSGCSL 271 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~---~i~ad~VV~aaG~~s~~l~~~~g~~~ 271 (473)
.++...+.+.|.+.+++.|++|+++++|+++..+++++.|++.++. +++||+||.|.|.+| .+.+.+|++.
T Consensus 103 ~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S-~VR~~lg~~~ 176 (499)
T 2qa2_A 103 AVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS-TVRKAAGFDF 176 (499)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC-HHHHHTTCCC
T ss_pred ecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc-HHHHHcCCCC
Confidence 4667888999999999999999999999999998888888776653 799999999999998 4778888764
No 40
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.43 E-value=1.5e-11 Score=122.35 Aligned_cols=70 Identities=13% Similarity=-0.015 Sum_probs=56.8
Q ss_pred ceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEE-EE--cC-CCc--EEEcCEEEEcCCcChHHHHHhcCCC
Q psy7710 200 IVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVT-IS--TK-QGD--HLESSYALVCAGLQADEMALKSGCS 270 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~-v~--~~-~g~--~i~ad~VV~aaG~~s~~l~~~~g~~ 270 (473)
.++...+.+.|.+.+.+.|++++++++|+++..+++.+. |+ +. +|. +++||.||.|+|.+|. +.+.+|..
T Consensus 96 ~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~-vr~~l~~~ 171 (453)
T 3atr_A 96 ELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS-FRSKLPPE 171 (453)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT-TGGGSCTT
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh-hHHhcCCC
Confidence 466788999999999999999999999999998777653 43 33 564 7899999999999984 66677764
No 41
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.43 E-value=4.5e-12 Score=129.33 Aligned_cols=73 Identities=16% Similarity=0.247 Sum_probs=60.4
Q ss_pred CccceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEc-CCeEEEEcC-CC--cEEEcCEEEEcCCcChHHHHHhcCCC
Q psy7710 197 NTGIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKEN-PESVTISTK-QG--DHLESSYALVCAGLQADEMALKSGCS 270 (473)
Q Consensus 197 ~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~-~~~v~v~~~-~g--~~i~ad~VV~aaG~~s~~l~~~~g~~ 270 (473)
....++...+...|.+.+++.|++++++++|+++..+ ++.+.|++. +| .+++||.||.|+|.+| .+.+.+|++
T Consensus 121 ~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S-~lr~~lg~~ 197 (591)
T 3i3l_A 121 HAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG-PISRKLGVR 197 (591)
T ss_dssp CEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC-HHHHHHTCE
T ss_pred eeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc-hhHHHcCCC
Confidence 3456788899999999999999999999999999875 556777765 55 5799999999999988 466777764
No 42
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.41 E-value=4e-12 Score=124.39 Aligned_cols=71 Identities=10% Similarity=0.111 Sum_probs=62.6
Q ss_pred ceeHHHHHHHHHHHHHHc-CcEEEeCceEEEEEEcCCeE--EEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCC
Q psy7710 200 IVDWGLVTRVMGEEFCEL-GGEIRLNQQVESFKENPESV--TISTKQGDHLESSYALVCAGLQADEMALKSGCSL 271 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~v--~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~ 271 (473)
.++...+.+.|.+.+++. |++|+++++|+++..+++++ .|++.+|.+++||.||.|+|.+|. +.+.+|++.
T Consensus 103 ~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~-vr~~lg~~~ 176 (399)
T 2x3n_A 103 LMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASY-VRRRLLDID 176 (399)
T ss_dssp ECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCH-HHHHTSCCC
T ss_pred cccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChH-HHHHhCCCc
Confidence 467788999999999988 99999999999999888878 888888878999999999999985 777888753
No 43
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.40 E-value=7e-12 Score=116.51 Aligned_cols=158 Identities=17% Similarity=0.139 Sum_probs=95.3
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
.++||+|||||++|+++|+.|+++ +|.+|+|||+.+.+++++. .+.+.+...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~-~G~~V~viEk~~~~gg~~~-~~~~~~~~~-------------------------- 89 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN-PNVQVAIIEQSVSPGGGAW-LGGQLFSAM-------------------------- 89 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS-TTSCEEEEESSSSCCTTTT-CCSTTCCCE--------------------------
T ss_pred cccCEEEECccHHHHHHHHHHHHc-CCCeEEEEECCCCCCCcee-cCCcchHHH--------------------------
Confidence 468999999999999999999983 2799999999876654432 221111100
Q ss_pred cCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEFC 215 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 215 (473)
... ... .+.+.+.|+ .+... +..+. ..+...+...|.+.+.
T Consensus 90 -----------~~~-~~~-------~~~l~~~G~-~~~~~---------------~~~~~----~~~~~~~~~~l~~~~~ 130 (284)
T 1rp0_A 90 -----------IVR-KPA-------HLFLDEIGV-AYDEQ---------------DTYVV----VKHAALFTSTIMSKLL 130 (284)
T ss_dssp -----------EEE-TTT-------HHHHHHHTC-CCEEC---------------SSEEE----ESCHHHHHHHHHHHHH
T ss_pred -----------HcC-cHH-------HHHHHHcCC-CcccC---------------CCEEE----ecCHHHHHHHHHHHHH
Confidence 000 000 011112233 11100 00000 1133556777877776
Q ss_pred H-cCcEEEeCceEEEEEEcCCeE-EEEcC---------CC-----cEEEcCEEEEcCCc------ChHHHHHhcCCCCCC
Q psy7710 216 E-LGGEIRLNQQVESFKENPESV-TISTK---------QG-----DHLESSYALVCAGL------QADEMALKSGCSLEP 273 (473)
Q Consensus 216 ~-~Gv~i~~~~~V~~i~~~~~~v-~v~~~---------~g-----~~i~ad~VV~aaG~------~s~~l~~~~g~~~~~ 273 (473)
+ .|++++++++|+++..+++.+ .|.+. ++ .+++||.||+|+|. ++..++..+|+. .
T Consensus 131 ~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~~~~~~g~~--~ 208 (284)
T 1rp0_A 131 ARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMI--D 208 (284)
T ss_dssp TSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHHHHHHTTSS--S
T ss_pred hcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHHHhhhccCC--C
Confidence 5 699999999999999877654 33321 21 47999999999995 334555555543 3
Q ss_pred ceeeeeeEE
Q psy7710 274 AIVPFRGEY 282 (473)
Q Consensus 274 ~~~p~~g~~ 282 (473)
++.|.+|..
T Consensus 209 ~v~~~~g~~ 217 (284)
T 1rp0_A 209 HVPGMKALD 217 (284)
T ss_dssp CCCCCEEEC
T ss_pred CcCCcCCch
Confidence 667777754
No 44
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.39 E-value=8.8e-12 Score=127.42 Aligned_cols=187 Identities=10% Similarity=0.026 Sum_probs=100.6
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
.++||+|||||++|+++|+.|+++ |.+|+||||.+..++.++...+|+.........+.... .+.+..+.
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~--G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~--------~~~d~~~~ 75 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQS--GQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEW--------HMYDTVKG 75 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHH--------HHHHHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHH--------HHHHHHHh
Confidence 468999999999999999999999 99999999985444333333444433211111111110 01111111
Q ss_pred cCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHH-hhcCCcc-------cceeEecCCccceeHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIK-TIEPYCK-------GVKAIHSPNTGIVDWGLVT 207 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~-~~~p~~~-------~~~~~~~~~~~~~~~~~~~ 207 (473)
....... ..+. .-.+.....+.++...|+ .+.......+. ..++... .....+. . ...+..+.
T Consensus 76 g~~~~d~-~~v~----~~~~~~~~~i~~l~~~Gv-~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~-~--d~~g~~l~ 146 (588)
T 2wdq_A 76 SDYIGDQ-DAIE----YMCKTGPEAILELEHMGL-PFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAA-A--DRTGHALL 146 (588)
T ss_dssp TTTCSCH-HHHH----HHHHHHHHHHHHHHHTTC-CCCBCTTSSBCEECCTTCBSTTTCSBCCCEECS-T--TCHHHHHH
T ss_pred cCCCCCH-HHHH----HHHHhHHHHHHHHHHcCC-CcccCCCCcEeeeecCCccccccccCcceEEEc-C--CCCHHHHH
Confidence 0000000 0000 000111233445555665 33222111000 0000000 0011111 1 12357788
Q ss_pred HHHHHHHHHcCcEEEeCceEEEEEEc-CCeE-EEE---cCCCc--EEEcCEEEEcCCcChH
Q psy7710 208 RVMGEEFCELGGEIRLNQQVESFKEN-PESV-TIS---TKQGD--HLESSYALVCAGLQAD 261 (473)
Q Consensus 208 ~~l~~~~~~~Gv~i~~~~~V~~i~~~-~~~v-~v~---~~~g~--~i~ad~VV~aaG~~s~ 261 (473)
..|.+.+++.|++|++++.|++|..+ ++.+ .|. +.+|. .++|+.||+|+|+++.
T Consensus 147 ~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 147 HTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 99999999999999999999999985 5433 333 24563 5899999999999864
No 45
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.38 E-value=9.7e-12 Score=127.28 Aligned_cols=186 Identities=11% Similarity=-0.001 Sum_probs=102.2
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccC-CCchhHHHHHHHhHHHHHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYY-KPGTLKAKLCVEGMNLAYEYFD 134 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 134 (473)
.++||+|||||++|+++|+.|+++ |.+|+||||.. +.++.|..+.|.+...... ..+.+.. . +.+..+
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~--G~~V~vlEK~~-~~~g~s~~a~GGi~a~~~~~~~ds~~~-~-------~~dtl~ 85 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEA--GFNTACVTKLF-PTRSHTVAAQGGINAALGNMEDDNWRW-H-------FYDTVK 85 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC-GGGSGGGGCCSCEECCCCSSSCCCHHH-H-------HHHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHC--CCcEEEEeccC-CCCCCchhhCCCcEecCCCCCCCCHHH-H-------HHHHHH
Confidence 468999999999999999999999 99999999984 5445554444444432211 1222211 1 011111
Q ss_pred hcCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHH-hhcCCccc--------ceeEecCCccceeHHH
Q psy7710 135 KRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIK-TIEPYCKG--------VKAIHSPNTGIVDWGL 205 (473)
Q Consensus 135 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~-~~~p~~~~--------~~~~~~~~~~~~~~~~ 205 (473)
... +.....+.. .-.+...+.+.++..+|+ .+.......+. ..++.... ....+.. ...+..
T Consensus 86 ~g~--~l~d~~~v~---~l~~~s~~~i~~L~~~Gv-~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~---d~tG~~ 156 (621)
T 2h88_A 86 GSD--WLGDQDAIH---YMTEQAPAAVIELENYGM-PFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVA---DRTGHS 156 (621)
T ss_dssp HTT--TCSCHHHHH---HHHHHHHHHHHHHHHTTC-CCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECST---TCHHHH
T ss_pred hcC--CCCCHHHHH---HHHHHHHHHHHHHHHcCC-CcccCCCCceeccccCcccccccCCCcceeEEEec---CCCHHH
Confidence 000 000000000 000112233445555665 33222111000 00010000 0111111 113567
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEE-EE--c-CCCc--EEEcCEEEEcCCcChH
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVT-IS--T-KQGD--HLESSYALVCAGLQAD 261 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~-v~--~-~~g~--~i~ad~VV~aaG~~s~ 261 (473)
++..|.+.+.+.|++|++++.|++|..+++.+. |. . .+|. .++|+.||+|||+++.
T Consensus 157 l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 157 LLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 889999999999999999999999987766432 33 2 4563 6899999999999874
No 46
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.38 E-value=2.2e-11 Score=124.39 Aligned_cols=193 Identities=20% Similarity=0.168 Sum_probs=105.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHH-HHHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMN-LAYEYFD 134 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 134 (473)
..+||+|||+|++|+++|+.|+++ |.+|+|+|+.+.+ ++.+..+.|.+........... .+ ..+.+ .+.++.+
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~--g~~v~~~e~~~~~-~~~~~~a~gg~~~~~~~~~~~~--g~-~ds~~~~~~~~~~ 198 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDA--GAKVILLEKEPIP-GGNTKLAAGGMNAAETKPQAKL--GI-EDKKQIMIDDTMK 198 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSS--SCCEEEECSSSSS-CTTGGGCCSCEECCSSSTTGGG--TC-CCCTHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCcEEEEecCCCC-CcchhhhCCeeEccCCHHHHHh--CC-CCCHHHHHHHHHH
Confidence 357999999999999999999999 8999999999655 4555555555543211000000 00 00000 1111111
Q ss_pred hcCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHH
Q psy7710 135 KRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEF 214 (473)
Q Consensus 135 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 214 (473)
.+........+. .-.+.....++++...|+ .+..+. .... ......+.+.++......+...|.+.+
T Consensus 199 -~g~~~~~~~~v~----~~~~~~~~~i~~l~~~Gv-~~~~~~------~~gg-~~~~r~~~~~~~~~~g~~l~~~L~~~~ 265 (572)
T 1d4d_A 199 -GGRNINDPELVK----VLANNSSDSIDWLTSMGA-DMTDVG------RMGG-ASVNRSHRPTGGAGVGAHVAQVLWDNA 265 (572)
T ss_dssp -HTTTCSCHHHHH----HHHHTHHHHHHHHHHHTC-CCCEEE------CCTT-CSSCCEEESTTTCCHHHHHHHHHHHHH
T ss_pred -hcCCCCCHHHHH----HHHHccHHHHHHHHhcCC-cccccc------ccCC-CcCCeeEecCCCCCCHHHHHHHHHHHH
Confidence 010000000000 000111223344444455 222110 0000 001122334444455778999999999
Q ss_pred HHcCcEEEeCceEEEEEEcC-CeE---EEEcCCCc--EEEcCEEEEcCCcCh--HHHHHhc
Q psy7710 215 CELGGEIRLNQQVESFKENP-ESV---TISTKQGD--HLESSYALVCAGLQA--DEMALKS 267 (473)
Q Consensus 215 ~~~Gv~i~~~~~V~~i~~~~-~~v---~v~~~~g~--~i~ad~VV~aaG~~s--~~l~~~~ 267 (473)
++.|++|+++++|++|..++ +.+ .+.+.+|. +++||.||+|+|+++ .++++..
T Consensus 266 ~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~ 326 (572)
T 1d4d_A 266 VKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERVSKY 326 (572)
T ss_dssp HHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHHHHH
T ss_pred HHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHHHHh
Confidence 99999999999999998766 543 34433563 689999999999986 3455443
No 47
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.37 E-value=3.8e-11 Score=116.56 Aligned_cols=67 Identities=15% Similarity=0.222 Sum_probs=56.8
Q ss_pred cceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCC
Q psy7710 199 GIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGC 269 (473)
Q Consensus 199 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~ 269 (473)
..++...+...|.+.+.+.|++|+++++|+++.. ++ .|++.+|.+++||.||.|+|.+| .+.+.++.
T Consensus 102 ~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~--~v~~~~g~~~~ad~vV~AdG~~s-~vr~~l~~ 168 (379)
T 3alj_A 102 RIMTRSHLHDALVNRARALGVDISVNSEAVAADP-VG--RLTLQTGEVLEADLIVGADGVGS-KVRDSIGF 168 (379)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-TT--EEEETTSCEEECSEEEECCCTTC-HHHHHHCC
T ss_pred EEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC--EEEECCCCEEEcCEEEECCCccH-HHHHHhcC
Confidence 3567788999999999999999999999999987 33 77777887899999999999998 46666665
No 48
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.36 E-value=1.6e-11 Score=124.08 Aligned_cols=70 Identities=13% Similarity=0.134 Sum_probs=57.5
Q ss_pred ceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCe---EEEEcCCCc--EEEcCEEEEcCCcChHHHHHhcCCC
Q psy7710 200 IVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPES---VTISTKQGD--HLESSYALVCAGLQADEMALKSGCS 270 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~---v~v~~~~g~--~i~ad~VV~aaG~~s~~l~~~~g~~ 270 (473)
.++...+...|.+.+++.|++|+++++|+++..+++. +.+.+.+|. +++||.||.|+|.+| .+.+.+|++
T Consensus 107 ~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S-~vr~~lg~~ 181 (512)
T 3e1t_A 107 QVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRT-RVSQAVGER 181 (512)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC-SSGGGTCCE
T ss_pred EecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch-HHHHHcCCC
Confidence 5778889999999999999999999999999988775 445666673 799999999999998 455555643
No 49
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.35 E-value=2e-11 Score=123.44 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=59.6
Q ss_pred ccceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCe--EEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCC
Q psy7710 198 TGIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPES--VTISTKQGDHLESSYALVCAGLQADEMALKSGCS 270 (473)
Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~--v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~ 270 (473)
...+++..+...|.+.+++.|++++++ +|+++..++++ +.|++.+|.+++||.||.|+|.+|..+.+.+|+.
T Consensus 167 ~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~ 240 (511)
T 2weu_A 167 AYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGR 240 (511)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCC
T ss_pred eEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCC
Confidence 446888999999999999999999999 99999885443 6688888878999999999999986545555654
No 50
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.35 E-value=2.8e-11 Score=123.83 Aligned_cols=72 Identities=22% Similarity=0.252 Sum_probs=56.7
Q ss_pred ceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcC-CeE-EEEcC------CC---------cEEEcCEEEEcCCcChH-
Q psy7710 200 IVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENP-ESV-TISTK------QG---------DHLESSYALVCAGLQAD- 261 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~-~~v-~v~~~------~g---------~~i~ad~VV~aaG~~s~- 261 (473)
.++...+.+.|.+.+++.|++|+++++|+++..++ +.+ .|.+. +| .+++||.||.|+|.+|.
T Consensus 140 ~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 140 VVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHH
T ss_pred EEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchH
Confidence 45667899999999999999999999999999875 334 37665 23 57999999999999974
Q ss_pred --HHHHhcCCCC
Q psy7710 262 --EMALKSGCSL 271 (473)
Q Consensus 262 --~l~~~~g~~~ 271 (473)
.+.+.+|+..
T Consensus 220 r~~l~~~~gl~~ 231 (584)
T 2gmh_A 220 AKQLYKKFDLRA 231 (584)
T ss_dssp HHHHHHHTTTTT
T ss_pred HHHHHHHhCCCC
Confidence 4555567653
No 51
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.35 E-value=4.6e-11 Score=119.66 Aligned_cols=57 Identities=16% Similarity=0.207 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh-HHHH
Q psy7710 205 LVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA-DEMA 264 (473)
Q Consensus 205 ~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s-~~l~ 264 (473)
.+.+.|.+.+.+ ++|+++++|++|..++++|.|++.+| +++||.||+|++.+. ..++
T Consensus 237 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll 294 (475)
T 3lov_A 237 SLIERLEEVLER--SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQLL 294 (475)
T ss_dssp HHHHHHHHHCSS--CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHHHC
T ss_pred HHHHHHHhhccC--CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHHHc
Confidence 455555544433 79999999999999888999999999 899999999999884 4443
No 52
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.32 E-value=3.3e-12 Score=128.15 Aligned_cols=56 Identities=13% Similarity=0.174 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCe-EEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPES-VTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~-v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
..+.+.|.+.+++.|++|+++++|++|..++++ +.|+++++ +++||.||+|++.+.
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~-~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDS-SLEADHVISAIPASV 290 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECSSC-EEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEECCe-EEEcCEEEECCCHHH
Confidence 468889999999999999999999999987765 88888665 899999999999873
No 53
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.32 E-value=2.8e-11 Score=120.66 Aligned_cols=173 Identities=12% Similarity=0.051 Sum_probs=98.1
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh-cC
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK-RN 137 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 137 (473)
||+|||||++|+++|+.|+++ |.+|+||||. . .+++|..+.|.+...... .+.. ..... +..+. .+
T Consensus 1 DVvVIG~G~AGl~aA~~la~~--G~~V~viek~-~-~~g~s~~a~Ggi~~~~~~-~d~~-~~~~~-------d~l~~g~~ 67 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA--GKKVTLISKR-I-DGGSTPIAKGGVAASVGS-DDSP-ELHAQ-------DTIRVGDG 67 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSS-T-TCSSGGGCCSCEECCCST-TCCH-HHHHH-------HHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCCEEEEeCC-C-CCchHHHHhCCeEEeCCC-CCCH-HHHHH-------HHHHhcCC
Confidence 799999999999999999999 8999999998 3 445555555555433221 1111 11111 11000 00
Q ss_pred CCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHHHHc
Q psy7710 138 IPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEFCEL 217 (473)
Q Consensus 138 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 217 (473)
. .++ ..+. .-.+.....++++..+|+ .+.. . ...++.......++. +...+..+...|.+.+++.
T Consensus 68 ~-~d~-~~v~----~~~~~~~~~i~~l~~~Gv-~~~~---~--~~~~~g~~~~r~~~~---~d~~g~~l~~~L~~~~~~~ 132 (472)
T 2e5v_A 68 L-CDV-KTVN----YVTSEAKNVIETFESWGF-EFEE---D--LRLEGGHTKRRVLHR---TDETGREIFNFLLKLAREE 132 (472)
T ss_dssp C-SCH-HHHH----HHHHHHHHHHHHHHHTTC-CCCS---S--CBCCTTCSSCCEECS---SSCHHHHHHHHHHHHHHHT
T ss_pred c-CCH-HHHH----HHHHHHHHHHHHHHHcCC-CCCc---c--cccccCcCcCcEEEe---CCCCHHHHHHHHHHHHHhC
Confidence 0 000 0000 000112233455555665 2221 0 000111110111111 2234677889999999888
Q ss_pred CcEEEeCceEEEEEEcCCeE---EEEcCCCcEEEcCEEEEcCCcChH
Q psy7710 218 GGEIRLNQQVESFKENPESV---TISTKQGDHLESSYALVCAGLQAD 261 (473)
Q Consensus 218 Gv~i~~~~~V~~i~~~~~~v---~v~~~~g~~i~ad~VV~aaG~~s~ 261 (473)
|++++++++| ++..+++.+ .+.+.+| ++.||.||+|+|+++.
T Consensus 133 gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 133 GIPIIEDRLV-EIRVKDGKVTGFVTEKRGL-VEDVDKLVLATGGYSY 177 (472)
T ss_dssp TCCEECCCEE-EEEEETTEEEEEEETTTEE-ECCCSEEEECCCCCGG
T ss_pred CCEEEECcEE-EEEEeCCEEEEEEEEeCCC-eEEeeeEEECCCCCcc
Confidence 9999999999 998776654 2333445 6789999999999974
No 54
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.32 E-value=3.1e-11 Score=104.10 Aligned_cols=66 Identities=15% Similarity=0.221 Sum_probs=56.6
Q ss_pred eHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCC
Q psy7710 202 DWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCS 270 (473)
Q Consensus 202 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~ 270 (473)
.+..+.+.+.+.+++.|++++++ +|+++..+++.+.|++++| ++++|.||+|+|..+ .+++.+|++
T Consensus 54 ~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~-~~~~~~g~~ 119 (180)
T 2ywl_A 54 SGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDP-TLPSLLGLT 119 (180)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCC-HHHHHHTCC
T ss_pred CHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCC-CccccCCCC
Confidence 34567778888999999999999 9999998877788999888 899999999999997 567777764
No 55
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.31 E-value=5.8e-11 Score=121.64 Aligned_cols=186 Identities=9% Similarity=-0.028 Sum_probs=100.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCC--CeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPK--MKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYF 133 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G--~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (473)
.++||+|||||++|+++|+.|+++ | .+|+||||....++.++...+|+... .. ..+.+.. . +.+..
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~--G~~~~V~vlEk~~~~~~~s~~a~GGi~~~-~~-~~ds~~~-~-------~~d~~ 71 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQA--NPNAKIALISKVYPMRSHTVAAEGGSAAV-AQ-DHDSFEY-H-------FHDTV 71 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH--CTTCCEEEEESSCGGGSGGGGCCSCEECC-CS-TTCCHHH-H-------HHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhc--CCCCcEEEEeCCCCCCChHHHhcCccEEe-CC-CCCCHHH-H-------HHHHH
Confidence 358999999999999999999999 7 99999999854444444444444322 11 1111110 0 01111
Q ss_pred HhcCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHH-hhcCCcccceeEecCCccceeHHHHHHHHHH
Q psy7710 134 DKRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIK-TIEPYCKGVKAIHSPNTGIVDWGLVTRVMGE 212 (473)
Q Consensus 134 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~ 212 (473)
.......+. ..+. .-.+.....+.++..+|+ .+.......+. ..++........+. . ......+...|.+
T Consensus 72 ~~g~~~~d~-~~v~----~~~~~~~~~i~~L~~~Gv-~f~~~~~g~~~~~~~gg~~~~r~~~~-~--d~tg~~l~~~L~~ 142 (602)
T 1kf6_A 72 AGGDWLCEQ-DVVD----YFVHHCPTEMTQLELWGC-PWSRRPDGSVNVRRFGGMKIERTWFA-A--DKTGFHMLHTLFQ 142 (602)
T ss_dssp HHTTTCSCH-HHHH----HHHHHHHHHHHHHHHTTC-CCCBCTTSSBCCBCCTTCSSCCEECS-T--TCHHHHHHHHHHH
T ss_pred HhcCCCCCH-HHHH----HHHHHHHHHHHHHHHcCC-CcccCCCCcccccccCCccCCeEEEc-C--CCCHHHHHHHHHH
Confidence 100000000 0000 000111233444555665 22211110000 00000000011111 1 1124678889999
Q ss_pred HHHHcC-cEEEeCceEEEEEEcCCeE---EEE-cCCCc--EEEcCEEEEcCCcChHH
Q psy7710 213 EFCELG-GEIRLNQQVESFKENPESV---TIS-TKQGD--HLESSYALVCAGLQADE 262 (473)
Q Consensus 213 ~~~~~G-v~i~~~~~V~~i~~~~~~v---~v~-~~~g~--~i~ad~VV~aaG~~s~~ 262 (473)
.+++.| ++|++++.|++|..+++.+ .+. +.+|. .++|+.||+|+|+++..
T Consensus 143 ~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 143 TSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred HHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 998888 9999999999999877643 233 35674 68999999999999753
No 56
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.30 E-value=8e-12 Score=119.56 Aligned_cols=155 Identities=18% Similarity=0.233 Sum_probs=88.7
Q ss_pred ccEEEEcCChHHHHHHHHHHh---cCCCCeEEEEeccCcccCcccCCCc----c-eEEeeccCCCchhHHHHHHHhHHHH
Q psy7710 58 YDVVVVGGGIVGVATARELKL---NYPKMKICLVEKEKELGMHQTGHNS----G-VVHAGIYYKPGTLKAKLCVEGMNLA 129 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~---~~~G~~V~viE~~~~~g~~~s~~~~----g-~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (473)
+||+|||||++|+++|+.|++ . |.+|+|+||.+.+|+..+.... + .+..+..+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~--G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~----------------- 62 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG--PLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQY----------------- 62 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C--CEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCC-----------------
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC--CceEEEEECCCCCccceeeeecCCCCCceEecCCce-----------------
Confidence 589999999999999999999 7 9999999999777665433211 0 11111000
Q ss_pred HHHHHhcCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHH
Q psy7710 130 YEYFDKRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRV 209 (473)
Q Consensus 130 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 209 (473)
..........+...++.+...+. ...+..... ... .......|....+. ..+.+.
T Consensus 63 -----------------~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~--~~~--~~~~~~~~~~~~g~---~~l~~~ 117 (342)
T 3qj4_A 63 -----------------ITCTPHYAKKHQRFYDELLAYGV-LRPLSSPIE--GMV--MKEGDCNFVAPQGI---SSIIKH 117 (342)
T ss_dssp -----------------EEECSSHHHHTHHHHHHHHHTTS-CEECCSCEE--TCC--C--CCEEEECTTCT---THHHHH
T ss_pred -----------------EEcCchHHHHHHHHHHHHHhCCC-eecCchhhc--cee--ccCCccceecCCCH---HHHHHH
Confidence 00000011122223333333332 111100000 000 00000112222221 334455
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcC
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
+.+. .|++|+++++|++|..++++|.|++.+|..+++|.||+|+...
T Consensus 118 l~~~---~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 118 YLKE---SGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVP 164 (342)
T ss_dssp HHHH---HTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHH
T ss_pred HHHh---cCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 5444 3899999999999999888899999888678999999999853
No 57
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.30 E-value=1.4e-11 Score=124.86 Aligned_cols=204 Identities=14% Similarity=0.102 Sum_probs=113.1
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC-c-----------------------------------------
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK-E----------------------------------------- 93 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~-~----------------------------------------- 93 (473)
..||+||||||.+|+++|.+|++. ++.+|+|||+++ .
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~-~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~~~~r~~~~~r 96 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTEN-PNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELATNNQTALIRS 96 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-TTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCTTTSCCCEECC
T ss_pred CCccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccCCCCCeeeccC
Confidence 579999999999999999999975 378999999986 1
Q ss_pred --ccCcccCCCcceEEeeccCCCchhHH-----HHHHHhHHHHHHHHHhcC----------C----C-CcccCeEEEEeC
Q psy7710 94 --LGMHQTGHNSGVVHAGIYYKPGTLKA-----KLCVEGMNLAYEYFDKRN----------I----P-YKKCGKLIVALN 151 (473)
Q Consensus 94 --~g~~~s~~~~g~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~----------~----~-~~~~g~l~~~~~ 151 (473)
.-||+|..|+.+...+...+.+.+.. .|.+.....+.+-.+.+. . . ....|.+.+...
T Consensus 97 Gk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v~~~ 176 (583)
T 3qvp_A 97 GNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPR 176 (583)
T ss_dssp BCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEEEBCC
T ss_pred ceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEEecCC
Confidence 12455556655544332111111100 122222222222222221 0 1 123466666543
Q ss_pred ---c-ChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCC----ccceeHHHHHHHHHHHHHHcCcEEEe
Q psy7710 152 ---E-QLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPN----TGIVDWGLVTRVMGEEFCELGGEIRL 223 (473)
Q Consensus 152 ---~-~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~Gv~i~~ 223 (473)
. .......+.+.+.+.|++...-+.. ....+..+.+. .+. ........|...+.+.|++|++
T Consensus 177 ~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~---------~~~~G~~~~~~t~~~~g~-R~saa~ayL~p~~~r~NL~V~t 246 (583)
T 3qvp_A 177 DTGDDYSPIVKALMSAVEDRGVPTKKDFGC---------GDPHGVSMFPNTLHEDQV-RSDAAREWLLPNYQRPNLQVLT 246 (583)
T ss_dssp CCSSCBCTHHHHHHHHHHTTTCCBCCCTTS---------SCCCEEECCCBSBCTTCB-BCCHHHHHTTTTTTCTTEEEEC
T ss_pred CCcccCCHHHHHHHHHHHHcCCCcCCCCCC---------CCCceecccceeEcCCCc-EecHHHHHHHHhhcCCCcEEEc
Confidence 1 2334456666677777631110000 00112222211 111 0111222333344567999999
Q ss_pred CceEEEEEEc----CCeE-EEEc--CCC--cEEEcC-EEEEcCCcC-hHHHHHhcCCC
Q psy7710 224 NQQVESFKEN----PESV-TIST--KQG--DHLESS-YALVCAGLQ-ADEMALKSGCS 270 (473)
Q Consensus 224 ~~~V~~i~~~----~~~v-~v~~--~~g--~~i~ad-~VV~aaG~~-s~~l~~~~g~~ 270 (473)
++.|++|..+ ++++ .|+. .+| .+++|+ .||+|+|++ |++|+..+||.
T Consensus 247 ~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIG 304 (583)
T 3qvp_A 247 GQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIG 304 (583)
T ss_dssp SCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBS
T ss_pred CCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCC
Confidence 9999999987 4433 3443 455 357786 699999998 89999888875
No 58
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.30 E-value=1.7e-11 Score=124.59 Aligned_cols=78 Identities=15% Similarity=0.244 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHcC--cEEEeCceEEEEEEcC--CeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCCCCceeeee
Q psy7710 204 GLVTRVMGEEFCELG--GEIRLNQQVESFKENP--ESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSLEPAIVPFR 279 (473)
Q Consensus 204 ~~~~~~l~~~~~~~G--v~i~~~~~V~~i~~~~--~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~~~~~~p~~ 279 (473)
..+.+.+...+++.+ ..++++++|+++..++ +.|.|++.+|.+++||.||+|+|.++..... .+ +.+.+.+
T Consensus 94 ~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p--~i---~G~~~f~ 168 (542)
T 1w4x_A 94 PEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLP--NF---PGLKDFA 168 (542)
T ss_dssp HHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCC--CC---TTGGGCC
T ss_pred HHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCC--CC---CCcccCC
Confidence 445555666666655 6799999999998764 4788999888889999999999998632211 01 1234456
Q ss_pred eEEEEeC
Q psy7710 280 GEYLLLN 286 (473)
Q Consensus 280 g~~~~~~ 286 (473)
|+.+...
T Consensus 169 G~~~hs~ 175 (542)
T 1w4x_A 169 GNLYHTG 175 (542)
T ss_dssp SEEEEGG
T ss_pred CceEECC
Confidence 7666553
No 59
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.29 E-value=1.9e-11 Score=117.44 Aligned_cols=59 Identities=7% Similarity=0.002 Sum_probs=52.4
Q ss_pred eHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEE-EEcCCCcEEEcCEEEEcCCcChH
Q psy7710 202 DWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQAD 261 (473)
Q Consensus 202 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~-v~~~~g~~i~ad~VV~aaG~~s~ 261 (473)
....+...+.+.+++.|++++++++|+++..+++.+. |++.++ ++++|.||+|+|.++.
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 74 ARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp BHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred CHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 3456778888888899999999999999999999999 999998 9999999999998863
No 60
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.29 E-value=7.9e-11 Score=115.06 Aligned_cols=65 Identities=11% Similarity=0.137 Sum_probs=52.7
Q ss_pred eeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcC
Q psy7710 201 VDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSG 268 (473)
Q Consensus 201 ~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g 268 (473)
.+...+.+.|.+.+ .|++|+++++|+++..+++++.|++.+|.+++||.||.|+|.+| .+.+.++
T Consensus 96 ~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S-~vr~~~~ 160 (397)
T 2vou_A 96 TSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGAS-VVRKRLL 160 (397)
T ss_dssp EEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTC-HHHHHHH
T ss_pred cCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcch-hHHHHhc
Confidence 34455666666654 58999999999999998888999998888899999999999998 3555555
No 61
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.29 E-value=2.4e-10 Score=112.25 Aligned_cols=66 Identities=14% Similarity=0.259 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeE-EEEcCCCcEEEcCEEEEcCCcCh-HHHHHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQA-DEMALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~ad~VV~aaG~~s-~~l~~~~g~~~ 271 (473)
+.+.+.+.++++|++++++++|+++..+++++ .|++.+|+++.||.||+|+|... ..+++.+|+..
T Consensus 196 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 263 (415)
T 3lxd_A 196 LSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGASG 263 (415)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTCCC
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCCCc
Confidence 45567778888999999999999999877665 68888888999999999999984 46888888765
No 62
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.27 E-value=5.3e-11 Score=119.87 Aligned_cols=57 Identities=14% Similarity=0.176 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHcC-cEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 204 GLVTRVMGEEFCELG-GEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 204 ~~~~~~l~~~~~~~G-v~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
..+.+.|.+.+.+.| ++|+++++|++|..+++++.|++.+|.+++||+||+|+|...
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHH
Confidence 568888999998888 999999999999988888999998887899999999999863
No 63
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.27 E-value=4.4e-11 Score=118.21 Aligned_cols=45 Identities=38% Similarity=0.605 Sum_probs=39.8
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSG 104 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g 104 (473)
+||+|||||++|+++|++|+++ |.+|+|||+++.+|+.+...+.+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~--G~~V~vlE~~~~~GG~~~t~~~~ 46 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA--GKKVLLLEGGERLGGRAYSRESR 46 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT--TCCEEEECSSSSSBTTCCEEECS
T ss_pred CCEEEECCcHHHHHHHHHHHHc--CCeEEEEecCCCccCeecceecc
Confidence 7999999999999999999999 99999999987888877654433
No 64
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.27 E-value=6e-11 Score=120.10 Aligned_cols=184 Identities=11% Similarity=0.009 Sum_probs=85.4
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
.++||+|||||++|+++|+.|++ |.+|+||||.+ ..+++|..+.|.+..... ..++. . ..+.+....
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~---G~~V~vlEk~~-~~~g~s~~a~Ggi~~~~~-~~ds~-~-------~~~~d~l~~ 73 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD---QHQVIVLSKGP-VTEGSTFYAQGGIAAVFD-ETDSI-D-------SHVEDTLIA 73 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT---TSCEEEECSSC-TTC-------------CC-SHHHH-H-------HHHHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHhc---CCcEEEEECCC-CCCCChhhcCCCEEEecC-CCCCH-H-------HHHHHHHHh
Confidence 46899999999999999999997 58999999984 555666666655543221 11111 0 011111111
Q ss_pred cCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeC----HHHH-HhhcCCcccceeEecCCccceeHHHHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVS----AEEI-KTIEPYCKGVKAIHSPNTGIVDWGLVTRVM 210 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~----~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l 210 (473)
.....+. ..+. .-.+...+.++++.+.|+ .+.... ...+ ...++... ...++.. +...+..+...|
T Consensus 74 g~g~~d~-~~v~----~~~~~~~~~i~~l~~~Gv-~f~~~~~~~~~g~~~~~~~gg~~-~~r~~~~--~d~~g~~l~~~L 144 (540)
T 1chu_A 74 GAGICDR-HAVE----FVASNARSCVQWLIDQGV-LFDTHIQPNGEESYHLTREGGHS-HRRILHA--ADATGREVETTL 144 (540)
T ss_dssp TTTCCCH-HHHH----HHHHHHHHHHHHHHHTTC-C-----------------------------------------CCC
T ss_pred hcccCCH-HHHH----HHHHhHHHHHHHHHHcCC-CcccCcccCcCCccccccccccc-cCeEEEe--CCCCHHHHHHHH
Confidence 1000000 0000 000112334455556665 332221 0000 00000000 0000110 012345677788
Q ss_pred HHHHHH-cCcEEEeCceEEEEEE-cCC------eE-EEEc---CCCc--EEEcCEEEEcCCcChH
Q psy7710 211 GEEFCE-LGGEIRLNQQVESFKE-NPE------SV-TIST---KQGD--HLESSYALVCAGLQAD 261 (473)
Q Consensus 211 ~~~~~~-~Gv~i~~~~~V~~i~~-~~~------~v-~v~~---~~g~--~i~ad~VV~aaG~~s~ 261 (473)
.+.+++ .|++|++++.|++|.. +++ .+ .|.+ .+|+ .++||.||+|+|+++.
T Consensus 145 ~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 209 (540)
T 1chu_A 145 VSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASK 209 (540)
T ss_dssp HHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGG
T ss_pred HHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccc
Confidence 888888 7999999999999998 434 33 2333 3563 6899999999999874
No 65
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.25 E-value=1.6e-11 Score=117.15 Aligned_cols=43 Identities=7% Similarity=0.095 Sum_probs=38.6
Q ss_pred CcEEEeCceEEEEEEcCCeEEEEcCCCcEE-EcCEEEEcCCcCh
Q psy7710 218 GGEIRLNQQVESFKENPESVTISTKQGDHL-ESSYALVCAGLQA 260 (473)
Q Consensus 218 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i-~ad~VV~aaG~~s 260 (473)
|++|+++++|++|..++++|.|++.+|..+ +||.||+|+|+.+
T Consensus 119 g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQ 162 (336)
T ss_dssp TCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHH
T ss_pred cCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHH
Confidence 899999999999999988999999888655 4899999999874
No 66
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.25 E-value=1.2e-11 Score=122.83 Aligned_cols=58 Identities=10% Similarity=0.148 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEc--CCeE-EEEcCCCcEEEcCEEEEcCCcChHH
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKEN--PESV-TISTKQGDHLESSYALVCAGLQADE 262 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~--~~~v-~v~~~~g~~i~ad~VV~aaG~~s~~ 262 (473)
..+.+.|.+.+++.|++|+++++|++|..+ ++++ .|+++ |.+++||.||+|+|.|+..
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~-g~~~~ad~VV~a~~~~~~~ 302 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTK-LGTFKAPLVIADPTYFPEK 302 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEET-TEEEECSCEEECGGGCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEEC-CeEEECCEEEECCCccchh
Confidence 578999999999999999999999999987 6664 57775 6689999999999999753
No 67
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.25 E-value=7.4e-11 Score=118.30 Aligned_cols=69 Identities=9% Similarity=0.157 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChH-HH--HHhcCCCC
Q psy7710 203 WGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EM--ALKSGCSL 271 (473)
Q Consensus 203 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~-~l--~~~~g~~~ 271 (473)
...+...+.+.+++.|++++++++|+++..+++++.|++.+|.++.+|.||+|+|.... .+ ++.+|++.
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~ 302 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKV 302 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCB
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceE
Confidence 35678888999999999999999999999888788888888888999999999998742 32 56667654
No 68
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.24 E-value=6.4e-11 Score=115.58 Aligned_cols=68 Identities=16% Similarity=0.179 Sum_probs=54.1
Q ss_pred eHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcC-CeEEEEc-CCCc--EEEcCEEEEcCCcChHHHHHhcCCC
Q psy7710 202 DWGLVTRVMGEEFCELGGEIRLNQQVESFKENP-ESVTIST-KQGD--HLESSYALVCAGLQADEMALKSGCS 270 (473)
Q Consensus 202 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~-~~v~v~~-~~g~--~i~ad~VV~aaG~~s~~l~~~~g~~ 270 (473)
+...+.+.|.+.+.+.|++|+++++|+++..++ +.+.|++ .+|. +++||.||.|+|.+|. +.+.++.+
T Consensus 101 ~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~-vr~~l~~~ 172 (394)
T 1k0i_A 101 GQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGI-SRQSIPAE 172 (394)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCS-TGGGSCGG
T ss_pred chHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcH-HHHhcCcc
Confidence 445677888888888899999999999998763 4566665 5775 6999999999999985 66666643
No 69
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.24 E-value=7.1e-11 Score=110.76 Aligned_cols=42 Identities=33% Similarity=0.457 Sum_probs=36.2
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMH 97 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~ 97 (473)
.++||+|||||++|+++|++|+++.+|.+|+|||+.+.++++
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg 119 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGG 119 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCc
Confidence 358999999999999999999986448999999998666544
No 70
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.24 E-value=9.4e-11 Score=114.57 Aligned_cols=65 Identities=3% Similarity=0.066 Sum_probs=51.7
Q ss_pred eeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcC
Q psy7710 201 VDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSG 268 (473)
Q Consensus 201 ~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g 268 (473)
++...+.+.|.+.+. +++|+++++|+++..+++++.|++.+|.+++||.||.|+|.+|. +.+.++
T Consensus 125 i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~-vR~~l~ 189 (398)
T 2xdo_A 125 INRNDLRAILLNSLE--NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSK-VRKFVT 189 (398)
T ss_dssp ECHHHHHHHHHHTSC--TTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCS-CCTTTC
T ss_pred ECHHHHHHHHHhhcC--CCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchh-HHhhcc
Confidence 455667777777654 36899999999999988888899888878999999999999973 334443
No 71
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.23 E-value=7e-11 Score=112.60 Aligned_cols=118 Identities=17% Similarity=0.227 Sum_probs=86.9
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
.++||+|||||++|+++|+.|+++ |.+|+|||+.+.+|+.....
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~gg~~~~~---------------------------------- 47 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMR--GLSFRFVDPLPEPGGQLTAL---------------------------------- 47 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSCHHHHHT----------------------------------
T ss_pred CcCcEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCCCCCCeeecc----------------------------------
Confidence 468999999999999999999999 89999999985443111000
Q ss_pred cCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEFC 215 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 215 (473)
.+...+.+ .+.-..+.+..+...+.+.++
T Consensus 48 ---------------------------------~~~~~~~~------------------~~~~~~~~~~~~~~~l~~~~~ 76 (335)
T 2zbw_A 48 ---------------------------------YPEKYIYD------------------VAGFPKVYAKDLVKGLVEQVA 76 (335)
T ss_dssp ---------------------------------CTTSEECC------------------STTCSSEEHHHHHHHHHHHHG
T ss_pred ---------------------------------CCCceeec------------------cCCCCCCCHHHHHHHHHHHHH
Confidence 00000000 000012345667777888888
Q ss_pred HcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 216 ELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 216 ~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.+++++++++|+++..+++.+.|.+.+|.++++|.||+|+|..+
T Consensus 77 ~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 77 PFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp GGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSE
T ss_pred HcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCC
Confidence 889999999999999987778888888887899999999999863
No 72
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.23 E-value=1.2e-10 Score=117.73 Aligned_cols=69 Identities=22% Similarity=0.266 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCe----EEEEcCCCc-EEEcCEEEEcCCcChH-H-HHHhcCCCC
Q psy7710 203 WGLVTRVMGEEFCELGGEIRLNQQVESFKENPES----VTISTKQGD-HLESSYALVCAGLQAD-E-MALKSGCSL 271 (473)
Q Consensus 203 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~----v~v~~~~g~-~i~ad~VV~aaG~~s~-~-l~~~~g~~~ 271 (473)
+..+...+.+.+++.|++++++++|+++..++++ +.|++.+|. +++||.||+|+|.+.+ . +++.+|++.
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~ 329 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDL 329 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCB
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCcc
Confidence 4667888999999999999999999999976544 678888886 7999999999999843 4 678888764
No 73
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.22 E-value=1.5e-11 Score=124.65 Aligned_cols=60 Identities=17% Similarity=0.138 Sum_probs=50.4
Q ss_pred ceeHHHHHHHHHHHHHH-cCcEEEeCceEEEEEEcCCeE-EEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 200 IVDWGLVTRVMGEEFCE-LGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
.++...+...+.+.+++ .|++| ++++|++|..+++.+ .|.+.+|.+++||.||+|+|.++
T Consensus 120 ~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 120 QADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred hCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 46677888899999988 69999 578999998877655 68888887899999999999874
No 74
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.22 E-value=1.5e-10 Score=104.05 Aligned_cols=59 Identities=8% Similarity=-0.056 Sum_probs=49.1
Q ss_pred eHHHHHHHHHHHHHHc-CcEEEeCceEEEEEEcCCeE-EEEcCCCcEEEcCEEEEcCCcChH
Q psy7710 202 DWGLVTRVMGEEFCEL-GGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQAD 261 (473)
Q Consensus 202 ~~~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~ad~VV~aaG~~s~ 261 (473)
++..+...+.+.+++. |++++ +++|+++..+++.+ .|.+.+|.+++||.||+|+|.++.
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 4456778888889887 99998 67999998877664 588888878999999999999864
No 75
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.21 E-value=1.7e-11 Score=120.58 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEE-cCCe-EEEEcCCCcEEEcCEEEEcCCcC
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKE-NPES-VTISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~-~~~~-v~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
..+.+.|.+.+++.|++|+++++|++|.. ++++ +.|++.+|++++||.||++++.+
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 67899999999999999999999999998 5554 56899888789999999999988
No 76
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.21 E-value=6e-11 Score=111.46 Aligned_cols=38 Identities=21% Similarity=0.326 Sum_probs=33.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGM 96 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~ 96 (473)
++|||+|||||++|++||++|+++ |++|+|||++ .+++
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~--g~~v~lie~~-~~gg 42 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRA--RKQIALFDNN-TNRN 42 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECS-CCGG
T ss_pred CCcCEEEECCCHHHHHHHHHHHHC--CCCEEEEeCC-CCCC
Confidence 679999999999999999999999 9999999997 4443
No 77
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=99.21 E-value=2.8e-11 Score=122.52 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=44.9
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEc----C-C---eEEEEcCCC---cEEEc-CEEEEcCCcC-hHHHHHhcCCC
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKEN----P-E---SVTISTKQG---DHLES-SYALVCAGLQ-ADEMALKSGCS 270 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~----~-~---~v~v~~~~g---~~i~a-d~VV~aaG~~-s~~l~~~~g~~ 270 (473)
|...+.+.+++|++++.|++|..+ + + +|.+...+| .+++| +.||+|+|+. |++|+..+||.
T Consensus 214 L~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIG 287 (566)
T 3fim_B 214 LRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIG 287 (566)
T ss_dssp HHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEE
T ss_pred hhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCC
Confidence 434445679999999999999876 3 2 344444433 36788 6799999998 89998887764
No 78
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.21 E-value=3.7e-11 Score=122.19 Aligned_cols=75 Identities=19% Similarity=0.180 Sum_probs=61.1
Q ss_pred cCCccceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCC--eEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCC
Q psy7710 195 SPNTGIVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPE--SVTISTKQGDHLESSYALVCAGLQADEMALKSGCS 270 (473)
Q Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~--~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~ 270 (473)
.+....+++..+...|.+.+++.|++++++ +|+++..+++ .+.|++.+|.+++||.||.|+|.+|..+.+.+|+.
T Consensus 156 ~~~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~ 232 (538)
T 2aqj_A 156 MSHAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEP 232 (538)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCC
T ss_pred CCccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCC
Confidence 455667899999999999999999999999 8999988644 35688888878999999999999986545555543
No 79
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.20 E-value=2e-10 Score=118.36 Aligned_cols=183 Identities=12% Similarity=0.065 Sum_probs=98.7
Q ss_pred CcccEEEEcCChHHHHHHHHHHhc----CCCCeEEEEeccCcccCcccCCCcc--eEEeeccCCCchhHHHHHHHhHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLN----YPKMKICLVEKEKELGMHQTGHNSG--VVHAGIYYKPGTLKAKLCVEGMNLA 129 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~----~~G~~V~viE~~~~~g~~~s~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (473)
.++||+|||||++|+++|++|+++ +||.+|+||||. .++.+++ .+.| .+..... ...... .+
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~-~~~~s~s-~AqG~~gi~a~l~--~ds~e~--------~~ 88 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKA-SLERSGA-VAQGLSAINTYLG--DNNADD--------YV 88 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSS-CTTTCST-TTTCEEEECCCCT--TSCHHH--------HH
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEec-CCCCCcc-cccCcchheeecC--CCCHHH--------HH
Confidence 468999999999999999999986 247899999998 4544433 4455 3322211 111100 00
Q ss_pred HHHHHhcCCCCcccCeEEEEeCcC----hhhHHHHHHHHHhCCCCcceee-------CHHHHHhhcCCcccceeEecCC-
Q psy7710 130 YEYFDKRNIPYKKCGKLIVALNEQ----LEPLHDLYERSIQNNVKDVRLV-------SAEEIKTIEPYCKGVKAIHSPN- 197 (473)
Q Consensus 130 ~~~~~~~~~~~~~~g~l~~~~~~~----~~~~~~~~~~~~~~g~~~~~~l-------~~~~~~~~~p~~~~~~~~~~~~- 197 (473)
....... ... ...+. .+.....+.++..+|+ .+... ...... .++.....++...+.
T Consensus 89 ~~~~~~~-~gl--------~d~~~v~~l~~~a~~~i~~L~~~Gv-~f~~~~~~G~~~~g~~~~-~fg~~~~~gg~~~~r~ 157 (662)
T 3gyx_A 89 RMVRTDL-MGL--------VREDLIYDLGRHVDDSVHLFEEWGL-PVWIKDEHGHNLDGAQAK-AAGKSLRNGDKPVRSG 157 (662)
T ss_dssp HHHHHHT-TTC--------CCHHHHHHHHHHHHHHHHHHHHHTC-CBCEECSSSCEECHHHHH-HHTCCTTTTCCBCCSS
T ss_pred HHHHHhc-CCC--------ccHHHHHHHHHHHHHHHHHHHHcCC-CceecCCCCccccchhhh-ccccccccCccccccc
Confidence 0000000 000 00000 1112233344445555 23222 011111 111111111111111
Q ss_pred --ccceeHHHHHHHHHHHHHHc--CcEEEeCceEEEEEEcCC---eEE-EE---cCCC--cEEEcCEEEEcCCcChH
Q psy7710 198 --TGIVDWGLVTRVMGEEFCEL--GGEIRLNQQVESFKENPE---SVT-IS---TKQG--DHLESSYALVCAGLQAD 261 (473)
Q Consensus 198 --~~~~~~~~~~~~l~~~~~~~--Gv~i~~~~~V~~i~~~~~---~v~-v~---~~~g--~~i~ad~VV~aaG~~s~ 261 (473)
...+.+..+...|.+.+++. |++|+.++.|.+|..+++ .+. |. ..+| ..+.|+.||+|||+++.
T Consensus 158 ~~~~~~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 158 RWQIMINGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVN 234 (662)
T ss_dssp TTCEEEEETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred eecccCCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccc
Confidence 11234566888888888887 999999999999988765 442 32 2344 35899999999999874
No 80
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.20 E-value=2.3e-10 Score=118.38 Aligned_cols=71 Identities=20% Similarity=0.306 Sum_probs=57.3
Q ss_pred ceeHHHHHHHHHHHHHHcCc--EEEeCceEEEEEEcCC----eEEEEcC------CC--cEEEcCEEEEcCCcChHHHHH
Q psy7710 200 IVDWGLVTRVMGEEFCELGG--EIRLNQQVESFKENPE----SVTISTK------QG--DHLESSYALVCAGLQADEMAL 265 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~~Gv--~i~~~~~V~~i~~~~~----~v~v~~~------~g--~~i~ad~VV~aaG~~s~~l~~ 265 (473)
.++...+.+.|.+.+++.|+ +|+++++|+++..+++ ++.|++. +| .+++||+||.|+|.+|. +.+
T Consensus 137 ~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~-vR~ 215 (639)
T 2dkh_A 137 ILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN-VRR 215 (639)
T ss_dssp ECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH-HHH
T ss_pred eeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH-HHH
Confidence 45667888999999999987 9999999999998752 4665543 45 47999999999999984 778
Q ss_pred hcCCCC
Q psy7710 266 KSGCSL 271 (473)
Q Consensus 266 ~~g~~~ 271 (473)
.+|++.
T Consensus 216 ~lg~~~ 221 (639)
T 2dkh_A 216 AIGRQL 221 (639)
T ss_dssp HTTCCC
T ss_pred HhCCCC
Confidence 888763
No 81
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.20 E-value=1.1e-10 Score=112.36 Aligned_cols=118 Identities=19% Similarity=0.290 Sum_probs=86.6
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
..+||+|||||++|+++|+.|+++ |.+|+|||+.+.+|+..... .+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~gg~~~~~-----------~~--------------------- 58 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMN--NISCRIIESMPQLGGQLAAL-----------YP--------------------- 58 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHHHHHT-----------CT---------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCCEEEEecCCCCCCccccc-----------CC---------------------
Confidence 468999999999999999999999 89999999985543111000 00
Q ss_pred cCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEFC 215 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 215 (473)
.....+ .+.-..+++..+...+.+.++
T Consensus 59 -----------------------------------~~~~~~------------------~~~~~~~~~~~~~~~l~~~~~ 85 (360)
T 3ab1_A 59 -----------------------------------EKHIYD------------------VAGFPEVPAIDLVESLWAQAE 85 (360)
T ss_dssp -----------------------------------TSEECC------------------STTCSSEEHHHHHHHHHHHHH
T ss_pred -----------------------------------Cccccc------------------CCCCCCCCHHHHHHHHHHHHH
Confidence 000000 000002345667778888888
Q ss_pred HcCcEEEeCceEEEEEEcCC-eEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 216 ELGGEIRLNQQVESFKENPE-SVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 216 ~~Gv~i~~~~~V~~i~~~~~-~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.|++++++++|+++..+++ .+.|++.+|.++++|.||+|+|..+
T Consensus 86 ~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 86 RYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp TTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred HhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 88999999999999998764 7888888887899999999999864
No 82
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.20 E-value=8.5e-11 Score=111.24 Aligned_cols=112 Identities=16% Similarity=0.227 Sum_probs=83.7
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
.++||+|||||++|+++|++|+++ |.+|+|||+. +|+.... .....
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~--~gg~~~~--~~~~~---------------------------- 59 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARY--MLKTLVIGET--PGGQLTE--AGIVD---------------------------- 59 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESS--TTGGGGG--CCEEC----------------------------
T ss_pred CccCEEEECccHHHHHHHHHHHHC--CCcEEEEecc--CCCeecc--ccccc----------------------------
Confidence 468999999999999999999999 8999999996 4322111 00000
Q ss_pred cCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEFC 215 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 215 (473)
.+ +......+..+...+.+.++
T Consensus 60 --------------------------------~~--------------------------~~~~~~~~~~~~~~~~~~~~ 81 (323)
T 3f8d_A 60 --------------------------------DY--------------------------LGLIEIQASDMIKVFNKHIE 81 (323)
T ss_dssp --------------------------------CS--------------------------TTSTTEEHHHHHHHHHHHHH
T ss_pred --------------------------------cc--------------------------CCCCCCCHHHHHHHHHHHHH
Confidence 00 00001344567777888888
Q ss_pred HcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 216 ELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 216 ~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.|+++++ ++|.++..+++.+.+++.++.++.+|.||+|+|...
T Consensus 82 ~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 82 KYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp TTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEE
T ss_pred HcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCC
Confidence 89999998 999999988888889998877999999999999873
No 83
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.19 E-value=2.8e-10 Score=111.60 Aligned_cols=68 Identities=16% Similarity=0.238 Sum_probs=53.1
Q ss_pred ceeHHHHHHHHHHHHHH-cC-cEEEeCceEEEEEEcCCeEEEEcCC---C--cEEEcCEEEEcCCcChHHHHHhcCC
Q psy7710 200 IVDWGLVTRVMGEEFCE-LG-GEIRLNQQVESFKENPESVTISTKQ---G--DHLESSYALVCAGLQADEMALKSGC 269 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~-~G-v~i~~~~~V~~i~~~~~~v~v~~~~---g--~~i~ad~VV~aaG~~s~~l~~~~g~ 269 (473)
.++...+.+.|.+.+.+ .| ++|+++++|+++.. ++++.|++.+ | .+++||.||.|+|.+| .+.+.++.
T Consensus 103 ~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S-~vR~~l~~ 177 (410)
T 3c96_A 103 SIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHS-AVRAHLHP 177 (410)
T ss_dssp EEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTC-HHHHHHCT
T ss_pred eeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccc-hhHHHhcC
Confidence 46667888889988876 36 58999999999988 6667766543 6 5789999999999998 35555553
No 84
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.19 E-value=4.4e-10 Score=116.16 Aligned_cols=177 Identities=12% Similarity=0.104 Sum_probs=97.4
Q ss_pred CcccEEEEcCChHHHHHHHHHH---h-cCCCCeEEEEeccCcccCcccCCCcceEEeeccCC-------CchhHHHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELK---L-NYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYK-------PGTLKAKLCVE 124 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~---~-~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~-------~~~~~~~~~~~ 124 (473)
.++||+|||||++|+++|+.|+ + + |.+|+||||.. .++ ++..+.|......... .+... .+
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~--G~~V~vlEK~~-~~~-s~~~a~G~~~~~~~~~~~~~~g~~ds~~-~~--- 92 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLG--GLKVTLVEKAA-VER-SGAVAQGLSAINTYIDLTGRSERQNTLE-DY--- 92 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTT--TCCEEEECSSC-TTT-CSTTTTCEEEESCCCCSSSSBSCCCCHH-HH---
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhC--CCeEEEEeCcC-CCC-CcceecccccccchhhHHHhcCCCCCHH-HH---
Confidence 4689999999999999999999 5 7 89999999984 443 3334445443321111 11111 11
Q ss_pred hHHHHHHHHHhcCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHH
Q psy7710 125 GMNLAYEYFDKRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWG 204 (473)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 204 (473)
+...... +........+. .-.+...+.+.++..+|+ .+...... ...+. +. ....+++.
T Consensus 93 ----~~~~~~~-g~~l~d~~~v~----~~~~~~~~~i~~l~~~Gv-~f~~~~~g---~~~~~----~~----~~~~~~g~ 151 (643)
T 1jnr_A 93 ----VRYVTLD-MMGLAREDLVA----DYARHVDGTVHLFEKWGL-PIWKTPDG---KYVRE----GQ----WQIMIHGE 151 (643)
T ss_dssp ----HHHHHHH-TTTCCCHHHHH----HHHHHHHHHHHHHHHTTC-CBCBCTTS---CBCBS----SS----SCEEEEET
T ss_pred ----HHHHHHH-hcCcCcHHHHH----HHHHHHHHHHHHHHHcCC-cceeCCCC---CccCC----Cc----cccCCCcH
Confidence 0111110 00000000000 001122334555666666 22211000 00000 00 00123345
Q ss_pred HHHHHHHHHHHHc-Cc-EEEeCceEEEEEEcCC---eEE-EE---cCCCc--EEEcCEEEEcCCcChH
Q psy7710 205 LVTRVMGEEFCEL-GG-EIRLNQQVESFKENPE---SVT-IS---TKQGD--HLESSYALVCAGLQAD 261 (473)
Q Consensus 205 ~~~~~l~~~~~~~-Gv-~i~~~~~V~~i~~~~~---~v~-v~---~~~g~--~i~ad~VV~aaG~~s~ 261 (473)
.+.+.|.+.+++. |+ +|++++.|++|..+++ .+. |. ..+|. .++|+.||+|||+++.
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccc
Confidence 5777888888887 99 9999999999998765 542 32 24553 6899999999999974
No 85
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.19 E-value=4.4e-10 Score=114.33 Aligned_cols=67 Identities=16% Similarity=0.343 Sum_probs=54.3
Q ss_pred eeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCC---C--cEEEcCEEEEcCCcChHHHHHhcCCCC
Q psy7710 201 VDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQ---G--DHLESSYALVCAGLQADEMALKSGCSL 271 (473)
Q Consensus 201 ~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~---g--~~i~ad~VV~aaG~~s~~l~~~~g~~~ 271 (473)
++...+.+.|.+.+++. |+++++|+++..++++|.+++.+ | .+++||+||.|+|.+|. +.+.+|++.
T Consensus 135 i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~-vR~~lg~~~ 206 (549)
T 2r0c_A 135 CPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSP-TRKALGIDA 206 (549)
T ss_dssp CCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCH-HHHHHTCCC
T ss_pred cCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcH-HHHHcCCCC
Confidence 45567778888888776 89999999999988887766543 5 47999999999999985 778888764
No 86
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.18 E-value=1.3e-09 Score=105.79 Aligned_cols=66 Identities=18% Similarity=0.353 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChH-HHHHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EMALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~-~l~~~~g~~~ 271 (473)
+.+.+.+.+++.|++++++++|+++..+++++.|++.+|.++++|.||+|+|..+. .+++.+|++.
T Consensus 189 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~ 255 (384)
T 2v3a_A 189 AAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAV 255 (384)
T ss_dssp HHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHHHHHTTCCB
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHCCCCC
Confidence 44557777888999999999999999877788888888888999999999999853 5888888764
No 87
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.18 E-value=3e-11 Score=121.99 Aligned_cols=59 Identities=15% Similarity=0.058 Sum_probs=49.8
Q ss_pred ceeHHHHHHHHHHHHHH-cCcEEEeCceEEEEEEcCCeE-EEEcCCCcEEEcCEEEEcCCcC
Q psy7710 200 IVDWGLVTRVMGEEFCE-LGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
.++...+...|.+.+++ .|++| ++++|++|..+++.+ .|.+.+|..++||.||+|+|.+
T Consensus 119 ~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 119 QADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred hCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 45677888999999988 59999 578999998877665 5888888889999999999975
No 88
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.18 E-value=1.3e-10 Score=117.52 Aligned_cols=60 Identities=12% Similarity=0.177 Sum_probs=51.1
Q ss_pred eeHHHHHHHHHHHHHHcCc--EEEeCceEEEEEEcCC--eEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 201 VDWGLVTRVMGEEFCELGG--EIRLNQQVESFKENPE--SVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 201 ~~~~~~~~~l~~~~~~~Gv--~i~~~~~V~~i~~~~~--~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
.+...+...+.+.+++.|+ .++++++|+++..+++ .|.|++.+|.+++||.||+|+|.++
T Consensus 84 ~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 84 ITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp EEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred CCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 4456677778888888888 8999999999987764 7899999997899999999999875
No 89
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.17 E-value=1.5e-10 Score=109.13 Aligned_cols=58 Identities=12% Similarity=0.164 Sum_probs=48.4
Q ss_pred eHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 202 DWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 202 ~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
++..+...+.+.+++.|+++++ ++|.++..+++.+.|.+.+|.++++|.||+|+|.++
T Consensus 57 ~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 57 SGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCC
Confidence 4456677788888888999987 889999988888888777777899999999999764
No 90
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.16 E-value=7.2e-10 Score=103.39 Aligned_cols=43 Identities=33% Similarity=0.608 Sum_probs=37.3
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQ 98 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~ 98 (473)
.++||+|||||++|+++|+.|+++++|.+|+|+|+.+.+|++.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 4579999999999999999999986679999999987666543
No 91
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.16 E-value=5.8e-11 Score=114.74 Aligned_cols=59 Identities=15% Similarity=0.090 Sum_probs=50.9
Q ss_pred eeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 201 VDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 201 ~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.+..+...+.+.+++.|++++++++|+++..+++.+.|.+.++ ++.+|.||+|+|.++
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTT
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCC
Confidence 44566777788888889999999999999998877788888887 799999999999985
No 92
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.16 E-value=1.3e-10 Score=110.51 Aligned_cols=116 Identities=21% Similarity=0.308 Sum_probs=85.9
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
..+||+|||||++|+++|+.|+++ |.+|+|||+.+.+|+.... . .+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~~~gG~~~~----------~-~~--------------------- 51 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMR--QASVKIIESLPQLGGQLSA----------L-YP--------------------- 51 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCHHHHH----------H-CT---------------------
T ss_pred ccceEEEECCCHHHHHHHHHHHHC--CCCEEEEEcCCCCCceehh----------c-CC---------------------
Confidence 357999999999999999999999 8999999998654311100 0 00
Q ss_pred cCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEFC 215 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 215 (473)
.....+ .+.-..+.+..+...+.+.++
T Consensus 52 -----------------------------------~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 78 (332)
T 3lzw_A 52 -----------------------------------EKYIYD------------------VAGFPKIRAQELINNLKEQMA 78 (332)
T ss_dssp -----------------------------------TSEECC------------------STTCSSEEHHHHHHHHHHHHT
T ss_pred -----------------------------------CceEec------------------cCCCCCCCHHHHHHHHHHHHH
Confidence 000000 000012345677888888888
Q ss_pred HcCcEEEeCceEEEEEEcCC-eEEEEcCCCcEEEcCEEEEcCCcC
Q psy7710 216 ELGGEIRLNQQVESFKENPE-SVTISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 216 ~~Gv~i~~~~~V~~i~~~~~-~v~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
+.|++++++++|+++..+++ .+.|++.+| ++.+|.||+|+|..
T Consensus 79 ~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 79 KFDQTICLEQAVESVEKQADGVFKLVTNEE-THYSKTVIITAGNG 122 (332)
T ss_dssp TSCCEEECSCCEEEEEECTTSCEEEEESSE-EEEEEEEEECCTTS
T ss_pred HhCCcEEccCEEEEEEECCCCcEEEEECCC-EEEeCEEEECCCCC
Confidence 89999999999999998876 788999888 59999999999984
No 93
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.13 E-value=9.1e-11 Score=119.03 Aligned_cols=199 Identities=14% Similarity=0.034 Sum_probs=108.0
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc-----------------------------------------
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL----------------------------------------- 94 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~----------------------------------------- 94 (473)
..||+||||||.+|+++|.+|++.+ ..+|+|||+++..
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~-~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~~~~r~~~~~~~~~ 83 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENP-NVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTTMVRRDDYERIEKP 83 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTST-TSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEEEEEETTEEEEEEE
T ss_pred CcccEEEECCcHHHHHHHHHHHhCC-CCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEEECCcccccccccc
Confidence 5699999999999999999999982 3799999998540
Q ss_pred ------cCcccCCCcceEEeeccCCCchhHHH----HHHHhHHHHHHHHHhc-CCC--------C-cccCeEEEEeCc-C
Q psy7710 95 ------GMHQTGHNSGVVHAGIYYKPGTLKAK----LCVEGMNLAYEYFDKR-NIP--------Y-KKCGKLIVALNE-Q 153 (473)
Q Consensus 95 ------g~~~s~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~--------~-~~~g~l~~~~~~-~ 153 (473)
-||+|..|+++...+...+.+.+... |.+.....+.+-.+.+ ... + ...|.+.+.... .
T Consensus 84 ~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~~~~~ 163 (577)
T 3q9t_A 84 NTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISHAELI 163 (577)
T ss_dssp ECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEECCCC
T ss_pred ccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeCCCCC
Confidence 24566677666554432111222110 1122221111111111 100 1 234666666544 2
Q ss_pred h---hhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecC----CccceeHHHHHHHHHHHHHHcCcEEEeCce
Q psy7710 154 L---EPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSP----NTGIVDWGLVTRVMGEEFCELGGEIRLNQQ 226 (473)
Q Consensus 154 ~---~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~ 226 (473)
. .....+.+.+.+.|++...-... . ...+..+.+ .........+ ...+.|++|++++.
T Consensus 164 ~~~~~~~~~~~~a~~~~G~~~~~d~n~-------~--~~~G~~~~~~~~~~g~R~s~~~~------l~~r~Nl~v~~~a~ 228 (577)
T 3q9t_A 164 DEMAPFRENLTKAWKSMGQPLIENIYD-------G--EMDGLTHCCDTIYRGQRSGSFLF------VKNKPNITIVPEVH 228 (577)
T ss_dssp GGGHHHHHHHHHHHHHTTCCBCSCCSS-------S--CCCEEEECEESEETTEECCGGGG------SSSCTTEEEECSEE
T ss_pred cccchHHHHHHHHHHHcCCCcCCCCCC-------C--CcCeEEeecceecCCeEeeHHHH------HhcCCCeEEEcCcE
Confidence 1 23344556666777621110000 0 001111111 1111111111 12456999999999
Q ss_pred EEEEEEc--CCeE---EEEcCCCc--EEEc-CEEEEcCCcC-hHHHHHhcCCC
Q psy7710 227 VESFKEN--PESV---TISTKQGD--HLES-SYALVCAGLQ-ADEMALKSGCS 270 (473)
Q Consensus 227 V~~i~~~--~~~v---~v~~~~g~--~i~a-d~VV~aaG~~-s~~l~~~~g~~ 270 (473)
|++|..+ ++.+ .+...+|. +++| +.||+|+|++ +++|+..+||.
T Consensus 229 v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIG 281 (577)
T 3q9t_A 229 SKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIG 281 (577)
T ss_dssp EEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEE
T ss_pred EEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCC
Confidence 9999987 5433 34444453 5678 5699999998 78888777653
No 94
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.13 E-value=2.8e-10 Score=107.67 Aligned_cols=113 Identities=17% Similarity=0.251 Sum_probs=81.5
Q ss_pred CCcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHH
Q psy7710 55 PALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFD 134 (473)
Q Consensus 55 ~~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (473)
..++||+|||||++|+++|+.|+++ |.+|+|+|+. .+|+....... .
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~-~~gg~~~~~~~------~------------------------ 60 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARS--GFSVAILDKA-VAGGLTAEAPL------V------------------------ 60 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESS-STTGGGGGCSC------B------------------------
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeCC-CCCccccccch------h------------------------
Confidence 3568999999999999999999999 8999999996 45432211000 0
Q ss_pred hcCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHH
Q psy7710 135 KRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEF 214 (473)
Q Consensus 135 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 214 (473)
...+.. ..++...+...+.+.+
T Consensus 61 --------------------------------~~~~~~--------------------------~~~~~~~~~~~~~~~~ 82 (319)
T 3cty_A 61 --------------------------------ENYLGF--------------------------KSIVGSELAKLFADHA 82 (319)
T ss_dssp --------------------------------CCBTTB--------------------------SSBCHHHHHHHHHHHH
T ss_pred --------------------------------hhcCCC--------------------------cccCHHHHHHHHHHHH
Confidence 000000 0122345666677788
Q ss_pred HHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 215 CELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 215 ~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
++.|++++. .+|.++..+++.+.|.+++ .++++|.||+|+|.++
T Consensus 83 ~~~~v~~~~-~~v~~i~~~~~~~~v~~~~-~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 83 ANYAKIREG-VEVRSIKKTQGGFDIETND-DTYHAKYVIITTGTTH 126 (319)
T ss_dssp HTTSEEEET-CCEEEEEEETTEEEEEESS-SEEEEEEEEECCCEEE
T ss_pred HHcCCEEEE-eeEEEEEEeCCEEEEEECC-CEEEeCEEEECCCCCc
Confidence 888999987 7899998877778787744 4899999999999864
No 95
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.13 E-value=2.7e-10 Score=115.43 Aligned_cols=60 Identities=20% Similarity=0.251 Sum_probs=50.3
Q ss_pred eeHHHHHHHHHHHHHHcCc--EEEeCceEEEEEEcCC--eEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 201 VDWGLVTRVMGEEFCELGG--EIRLNQQVESFKENPE--SVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 201 ~~~~~~~~~l~~~~~~~Gv--~i~~~~~V~~i~~~~~--~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
.+...+...+.+.+++.|+ .++++++|+++..+++ .|.|++.+|.+++||.||+|+|.++
T Consensus 96 ~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 96 ATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLS 159 (549)
T ss_dssp CBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEE
T ss_pred CCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCC
Confidence 3445677778888888888 8999999999987664 7899999998899999999999765
No 96
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.13 E-value=6.7e-11 Score=119.85 Aligned_cols=60 Identities=12% Similarity=0.128 Sum_probs=49.9
Q ss_pred ceeHHHHHHHHHHHHHHc-CcEEEeCceEEEEEEcCCeEE-EEcCCCcEEEcCEEEEcCCcCh
Q psy7710 200 IVDWGLVTRVMGEEFCEL-GGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~v~-v~~~~g~~i~ad~VV~aaG~~s 260 (473)
.++...+...+.+.+++. |++++ +..|+.+..+++.+. |.+.+|..++||.||+|+|.|+
T Consensus 113 ~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 113 QADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp EECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred hcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 467778888899888874 99995 568999988777765 8888888899999999999874
No 97
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.13 E-value=7.6e-10 Score=110.27 Aligned_cols=68 Identities=13% Similarity=0.156 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCe-EEEE-cCCCcEEEcCEEEEcCCcChH-HH--HHhcCCCC
Q psy7710 203 WGLVTRVMGEEFCELGGEIRLNQQVESFKENPES-VTIS-TKQGDHLESSYALVCAGLQAD-EM--ALKSGCSL 271 (473)
Q Consensus 203 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~-v~v~-~~~g~~i~ad~VV~aaG~~s~-~l--~~~~g~~~ 271 (473)
+..+.+.+.+.+++.|++++++++|+++..++++ +.|+ +.+|+ +.+|.||+|+|...+ .+ ++.+|++.
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~ 282 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRT 282 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCB
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceE
Confidence 3567888999999999999999999999987544 6788 88885 999999999998743 32 56666654
No 98
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.13 E-value=1.3e-10 Score=117.72 Aligned_cols=60 Identities=8% Similarity=0.096 Sum_probs=49.0
Q ss_pred eHHHHHHHHHHHHHHcCc--EEEeCceEEEEEEcC--CeEEEEcCCCcEEEcCEEEEcCCcChH
Q psy7710 202 DWGLVTRVMGEEFCELGG--EIRLNQQVESFKENP--ESVTISTKQGDHLESSYALVCAGLQAD 261 (473)
Q Consensus 202 ~~~~~~~~l~~~~~~~Gv--~i~~~~~V~~i~~~~--~~v~v~~~~g~~i~ad~VV~aaG~~s~ 261 (473)
....+...+.+.+++.|+ .++++++|+++..++ +.|.|++.+|.+++||.||+|+|.++.
T Consensus 85 ~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 85 SQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSA 148 (545)
T ss_dssp BHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC
T ss_pred CHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCC
Confidence 445566677777777787 799999999998654 578999999988999999999998753
No 99
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.13 E-value=2.8e-10 Score=114.21 Aligned_cols=60 Identities=12% Similarity=0.055 Sum_probs=48.7
Q ss_pred eeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEc---CCeEEEEc--C-CC--cEEEcCEEEEcCCcCh
Q psy7710 201 VDWGLVTRVMGEEFCELGGEIRLNQQVESFKEN---PESVTIST--K-QG--DHLESSYALVCAGLQA 260 (473)
Q Consensus 201 ~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~---~~~v~v~~--~-~g--~~i~ad~VV~aaG~~s 260 (473)
++...+...|.+.+++.|++|+++++|+++..+ ++.+.|++ . +| .+++||.||+|+|.++
T Consensus 163 ~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 163 ISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 445678888999999999999999999999864 34566655 4 55 4789999999999997
No 100
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.13 E-value=3.8e-10 Score=114.89 Aligned_cols=72 Identities=15% Similarity=0.165 Sum_probs=59.3
Q ss_pred ccceeHHHHHHHHHHHHHHc-CcEEEeCceEEEEEEcCCe--EEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCC
Q psy7710 198 TGIVDWGLVTRVMGEEFCEL-GGEIRLNQQVESFKENPES--VTISTKQGDHLESSYALVCAGLQADEMALKSGCS 270 (473)
Q Consensus 198 ~~~~~~~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~--v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~ 270 (473)
...+++..+.+.|.+.+++. |++++++ +|+++..++++ +.|++.+|.+++||.||.|+|.+|..+.+.+|+.
T Consensus 188 ~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~ 262 (550)
T 2e4g_A 188 AWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEP 262 (550)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCC
T ss_pred ceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCC
Confidence 34588899999999999998 9999999 99999876443 5688888878999999999999986545556653
No 101
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.13 E-value=4.5e-10 Score=111.46 Aligned_cols=60 Identities=15% Similarity=0.056 Sum_probs=49.5
Q ss_pred eeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCC---Cc---EEEcCEEEEcCCcCh
Q psy7710 201 VDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQ---GD---HLESSYALVCAGLQA 260 (473)
Q Consensus 201 ~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~---g~---~i~ad~VV~aaG~~s 260 (473)
.....+.+.+.+.+++.+..++++++|+++..+++.|.|++.+ |. ++.+|.||+|+|.++
T Consensus 112 ~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 112 PHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp CBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred CCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 3456677778888887788999999999999888888877654 65 689999999999976
No 102
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.12 E-value=1.1e-09 Score=107.28 Aligned_cols=66 Identities=21% Similarity=0.393 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh-HHHHHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA-DEMALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s-~~l~~~~g~~~ 271 (473)
+.+.+.+.+++.|+++++++.|+++..++....|++.+|++++||.||+|+|... ..+++.+|++.
T Consensus 187 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 253 (410)
T 3ef6_A 187 IGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLAC 253 (410)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCB
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCcc
Confidence 4555777788899999999999999877655578888888999999999999984 46888888764
No 103
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.12 E-value=3.5e-10 Score=105.66 Aligned_cols=58 Identities=9% Similarity=0.042 Sum_probs=47.4
Q ss_pred eHHHHHHHHHHHHHHc-CcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 202 DWGLVTRVMGEEFCEL-GGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 202 ~~~~~~~~l~~~~~~~-Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
.+..+...+.+.+++. +++++ +++|+++..+++.+.|++.+|.++++|.||+|+|...
T Consensus 54 ~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 54 APGEIIAEARRQIERYPTIHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTD 112 (297)
T ss_dssp CHHHHHHHHHHHHTTCTTEEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEE
T ss_pred CHHHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCC
Confidence 3455677777888776 67776 4599999988888999998887899999999999864
No 104
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.12 E-value=2.3e-10 Score=109.00 Aligned_cols=59 Identities=15% Similarity=0.218 Sum_probs=49.2
Q ss_pred eeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcC---CCcEEEcCEEEEcCCcCh
Q psy7710 201 VDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTK---QGDHLESSYALVCAGLQA 260 (473)
Q Consensus 201 ~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~---~g~~i~ad~VV~aaG~~s 260 (473)
+.+..+...+.+.+++.|+++++++ |.++..+++.+.+.+. ++..+.+|.||+|+|...
T Consensus 81 ~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 81 LTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCc
Confidence 3456677888888999999999988 9999988888888773 556899999999999863
No 105
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.11 E-value=1.1e-09 Score=110.83 Aligned_cols=54 Identities=20% Similarity=0.322 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
..+.+.|.+. .|++|+++++|++|..+++++.|++.+|++++||+||+|++.+.
T Consensus 215 ~~l~~~l~~~---lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 215 GQVSERIMDL---LGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHHHHHHHHH---HGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGG
T ss_pred HHHHHHHHHH---cCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHH
Confidence 4455555544 37899999999999988888889998888899999999999874
No 106
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.11 E-value=1.2e-09 Score=109.18 Aligned_cols=69 Identities=12% Similarity=0.222 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh-HHHHHhcCCCC
Q psy7710 203 WGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA-DEMALKSGCSL 271 (473)
Q Consensus 203 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s-~~l~~~~g~~~ 271 (473)
...+.+.+.+.+++.|++++++++|+++..+++.+.|.+.+|+++++|.||+|+|... ..+++.+|++.
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 270 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAGLEL 270 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHHHTCCB
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccC
Confidence 3567888899999999999999999999987777777777887899999999999984 46788888764
No 107
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.10 E-value=2.5e-10 Score=115.43 Aligned_cols=54 Identities=9% Similarity=0.115 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcC
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
..+.+.|.+.+.+.|++|+++++|++|..+++.+ ++.+|.+++||+||.++...
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v--~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTV--TLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTEE--EETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCEE--EEcCCCEEECCEEEECCCHH
Confidence 6788889888889999999999999999877654 45678899999999988654
No 108
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.09 E-value=4.8e-09 Score=108.81 Aligned_cols=71 Identities=15% Similarity=0.299 Sum_probs=55.7
Q ss_pred ceeHHHHHHHHHHHHHHcC---cEEEeCceEEEEEEcC--------CeEEEEc---------------------------
Q psy7710 200 IVDWGLVTRVMGEEFCELG---GEIRLNQQVESFKENP--------ESVTIST--------------------------- 241 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~~G---v~i~~~~~V~~i~~~~--------~~v~v~~--------------------------- 241 (473)
.++...+.+.|.+.+++.| ++|+++++|+++..++ ..|.|+.
T Consensus 115 ~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 194 (665)
T 1pn0_A 115 VLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQ 194 (665)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHH
T ss_pred EeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEeccccccccccccccccccccccccc
Confidence 3566778888999998887 8999999999998764 3565532
Q ss_pred ---------------CCC--cEEEcCEEEEcCCcChHHHHHhcCCCC
Q psy7710 242 ---------------KQG--DHLESSYALVCAGLQADEMALKSGCSL 271 (473)
Q Consensus 242 ---------------~~g--~~i~ad~VV~aaG~~s~~l~~~~g~~~ 271 (473)
.+| .+++||+||-|.|.+| .+.+.+|++.
T Consensus 195 ~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S-~VR~~lg~~~ 240 (665)
T 1pn0_A 195 TQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHS-WVRRTLGFEM 240 (665)
T ss_dssp HHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTC-HHHHHHTCCC
T ss_pred ccccccccccccccCCCCceEEEEeCEEEeccCCCC-HHHHhcCCCC
Confidence 234 4789999999999998 4777888764
No 109
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.08 E-value=3.3e-09 Score=103.70 Aligned_cols=66 Identities=14% Similarity=0.248 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeE-EEEcCCCcEEEcCEEEEcCCcC-hHHHHHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQ-ADEMALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~ad~VV~aaG~~-s~~l~~~~g~~~ 271 (473)
+.+.+.+.+++.|++++++++|+++..+++.+ .|++.+|+++.||.||+|+|.. ...+++.+|+..
T Consensus 186 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~ 253 (404)
T 3fg2_P 186 ISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPT 253 (404)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCB
T ss_pred HHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCC
Confidence 55567788888999999999999999876665 5888888899999999999998 446888888765
No 110
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.08 E-value=1.9e-09 Score=105.61 Aligned_cols=64 Identities=11% Similarity=0.155 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcC-CeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCCC
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENP-ESVTISTKQGDHLESSYALVCAGLQADEMALKSGCSL 271 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~-~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~~ 271 (473)
..+.+.|.+. .+.+|+++++|++++..+ +++.|++.+|.+++||.||-|.|.+| .+.+.++...
T Consensus 112 ~~L~~~L~~~---~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S-~vR~~l~~~~ 176 (412)
T 4hb9_A 112 TELKEILNKG---LANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNS-KVRKQYLPFI 176 (412)
T ss_dssp HHHHHHHHTT---CTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTC-HHHHHHSTTC
T ss_pred HHHHHHHHhh---ccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCc-chHHHhCCCc
Confidence 4444444433 356789999999998754 56889999999999999999999998 4566665543
No 111
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.08 E-value=8.5e-10 Score=110.51 Aligned_cols=58 Identities=10% Similarity=0.209 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEc---CCCcEEEcCEEEEcCCcCh-HHHH
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTIST---KQGDHLESSYALVCAGLQA-DEMA 264 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~---~~g~~i~ad~VV~aaG~~s-~~l~ 264 (473)
..+.+.|.+.+ |++|+++++|++|..+++++.|++ .+|.+++||.||+|++.+. ..|+
T Consensus 238 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll 299 (478)
T 2ivd_A 238 QVLIDALAASL---GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKLL 299 (478)
T ss_dssp HHHHHHHHHHH---GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHh---hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHHHh
Confidence 45666676665 679999999999998777788887 6666899999999999884 3444
No 112
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.08 E-value=4e-10 Score=106.25 Aligned_cols=119 Identities=18% Similarity=0.244 Sum_probs=81.2
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
..|||+|||||++|+++|++|+++ |++|+|+|+. ..++.+.+ |++...
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~--g~~v~liE~~-~~gg~~~~---G~~~~~-------------------------- 50 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRS--SLKPVMYEGF-MAGGVAAG---GQLTTT-------------------------- 50 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCCEEECCS-SGGGCCTT---CGGGGS--------------------------
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCCEEEEecC-CCCCcccC---CCcCCh--------------------------
Confidence 469999999999999999999999 9999999997 44432211 111000
Q ss_pred cCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEFC 215 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 215 (473)
..+. .+|.+ + ..+.+..+...+.+.++
T Consensus 51 -------------------------------------~~i~------~~~g~--------~--~~i~~~~l~~~~~~~~~ 77 (314)
T 4a5l_A 51 -------------------------------------TIIE------NFPGF--------P--NGIDGNELMMNMRTQSE 77 (314)
T ss_dssp -------------------------------------SEEC------CSTTC--------T--TCEEHHHHHHHHHHHHH
T ss_pred -------------------------------------HHhh------hccCC--------c--ccCCHHHHHHHHHHHHh
Confidence 0000 00000 0 02345667777888888
Q ss_pred HcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 216 ELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 216 ~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.+.++.. ..|..+....+...+.+.++.++++|.||+|||+..
T Consensus 78 ~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 78 KYGTTIIT-ETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATA 121 (314)
T ss_dssp HTTCEEEC-CCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEE
T ss_pred hcCcEEEE-eEEEEeecCCCceEEEECCCeEEEEeEEEEcccccc
Confidence 89998865 456666666666667777777999999999999753
No 113
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.08 E-value=6.2e-10 Score=105.52 Aligned_cols=114 Identities=15% Similarity=0.209 Sum_probs=81.2
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
.++||+|||||++|+++|+.|++. |.+|+|||+. .+|+....... + ...
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~--g~~v~lie~~-~~gg~~~~~~~--~----~~~---------------------- 55 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRA--QLSTLILEKG-MPGGQIAWSEE--V----ENF---------------------- 55 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESS-CTTGGGGGCSC--B----CCS----------------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHc--CCcEEEEeCC-CCCcccccccc--c----ccC----------------------
Confidence 468999999999999999999999 8999999998 55432211000 0 000
Q ss_pred cCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEFC 215 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 215 (473)
.++ . ..+.+..+...+.+.++
T Consensus 56 -------------------------------~~~-~---------------------------~~~~~~~~~~~l~~~~~ 76 (325)
T 2q7v_A 56 -------------------------------PGF-P---------------------------EPIAGMELAQRMHQQAE 76 (325)
T ss_dssp -------------------------------TTC-S---------------------------SCBCHHHHHHHHHHHHH
T ss_pred -------------------------------CCC-C---------------------------CCCCHHHHHHHHHHHHH
Confidence 000 0 01233456667778888
Q ss_pred HcCcEEEeCceEEEEEEc--CCe-EEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 216 ELGGEIRLNQQVESFKEN--PES-VTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 216 ~~Gv~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.|++++. .+|.++..+ ++. +.|.+.+|.++++|+||+|+|..+
T Consensus 77 ~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 77 KFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADP 123 (325)
T ss_dssp HTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEE
T ss_pred HcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 89999987 689999876 443 666666777899999999999864
No 114
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.06 E-value=3.8e-10 Score=107.41 Aligned_cols=58 Identities=12% Similarity=0.083 Sum_probs=48.5
Q ss_pred eeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 201 VDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 201 ~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+++..+...+.+.+++.|++++.++ |.++..+++.+.|++ ++.++++|.||+|+|.++
T Consensus 67 ~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 67 ILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVA 124 (333)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCc
Confidence 3455677778888888999999887 999988777788888 666899999999999985
No 115
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.05 E-value=4.7e-10 Score=117.54 Aligned_cols=43 Identities=23% Similarity=0.342 Sum_probs=38.5
Q ss_pred cCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcC
Q psy7710 217 LGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 217 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
.|++|+++++|++|..+++++.|++.+|.+++||+||+|+...
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHH
Confidence 4889999999999999888899999888789999999999643
No 116
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=99.05 E-value=8.6e-10 Score=111.83 Aligned_cols=203 Identities=15% Similarity=0.127 Sum_probs=108.2
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccC--------cc-----cCCC------------cceEEe--
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGM--------HQ-----TGHN------------SGVVHA-- 108 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~--------~~-----s~~~------------~g~~~~-- 108 (473)
..+|++|||+|.+|+++|++|++. ++.+|+|||++..... .. +..+ ..+...
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~-~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~~~~~~~~~rG 90 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSED-PAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQENGNSFMRHARA 90 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSSSCTTCEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCCCCceEEeecc
Confidence 469999999999999999999986 3789999999843321 00 0000 000000
Q ss_pred -----------eccCCCc-hhHHHHH---------HHhHHHHHHHHHhc-C----CCC-cccCeEEEEeCc-ChhhHHHH
Q psy7710 109 -----------GIYYKPG-TLKAKLC---------VEGMNLAYEYFDKR-N----IPY-KKCGKLIVALNE-QLEPLHDL 160 (473)
Q Consensus 109 -----------~~~~~~~-~~~~~~~---------~~~~~~~~~~~~~~-~----~~~-~~~g~l~~~~~~-~~~~~~~~ 160 (473)
..+.... ..+..+. +.....+.+..++. + ..+ ...|.+.+.... .....+.+
T Consensus 91 k~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~~~~~~g~~Gpl~v~~~~~~~~~~~~~ 170 (546)
T 2jbv_A 91 KVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGVAL 170 (546)
T ss_dssp CSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBTTBTTSCBSCSEEEEECCSCCHHHHHH
T ss_pred cccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCCccccCCCCCCEEEecCCCCCHHHHHH
Confidence 0000110 0111121 12222222222221 1 112 234667765544 45555666
Q ss_pred HHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecC-----CccceeHHHHHHHHHHHH-HHcCcEEEeCceEEEEEEcC
Q psy7710 161 YERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSP-----NTGIVDWGLVTRVMGEEF-CELGGEIRLNQQVESFKENP 234 (473)
Q Consensus 161 ~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~-~~~Gv~i~~~~~V~~i~~~~ 234 (473)
.+.+.+.|++. . +... ......+..+++ ...... ....+.+.+ ++.|++|++++.|++|..++
T Consensus 171 ~~a~~~~G~~~-~--d~n~-----~~~~~~g~~~~~~~~~~~g~R~s---~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~ 239 (546)
T 2jbv_A 171 LDACEQAGIPR-A--KFNT-----GTTVVNGANFFQINRRADGTRSS---SSVSYIHPIVEQENFTLLTGLRARQLVFDA 239 (546)
T ss_dssp HHHHHHTTCCB-C--CSSS-----SSCCSSEEEECEECBCTTSBBCC---HHHHHTGGGTTCTTEEEECSCEEEEEEECT
T ss_pred HHHHHHCCCCc-c--CCCC-----CCcCcceEEeeeeecCCCCeEcC---HHHHHHHHHhcCCCcEEEeCCEEEEEEECC
Confidence 77777788732 2 2111 000011111221 111111 122233333 35799999999999999876
Q ss_pred -CeE-EEEc-CC--C--cEEEcC-EEEEcCCcC-hHHHHHhcCCC
Q psy7710 235 -ESV-TIST-KQ--G--DHLESS-YALVCAGLQ-ADEMALKSGCS 270 (473)
Q Consensus 235 -~~v-~v~~-~~--g--~~i~ad-~VV~aaG~~-s~~l~~~~g~~ 270 (473)
+++ .|+. .+ | .+++|+ .||+|+|++ +++|+..+|+.
T Consensus 240 ~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG 284 (546)
T 2jbv_A 240 DRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIG 284 (546)
T ss_dssp TSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEE
T ss_pred CCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCC
Confidence 433 3443 22 4 368898 899999996 88898877753
No 117
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=99.05 E-value=6.4e-10 Score=112.84 Aligned_cols=55 Identities=20% Similarity=0.325 Sum_probs=43.4
Q ss_pred HcCcEEEeCceEEEEEEcCCeEE---EEcCCC-cEEEcCEEEEcCCcC-hHHHHHhcCCC
Q psy7710 216 ELGGEIRLNQQVESFKENPESVT---ISTKQG-DHLESSYALVCAGLQ-ADEMALKSGCS 270 (473)
Q Consensus 216 ~~Gv~i~~~~~V~~i~~~~~~v~---v~~~~g-~~i~ad~VV~aaG~~-s~~l~~~~g~~ 270 (473)
+.+++|++++.|.++..++++++ +...++ ..+.|+.||+|+|+. |++|+..+|+.
T Consensus 223 r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~SGig 282 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRSGIG 282 (526)
T ss_dssp CTTEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHTTEE
T ss_pred CCCeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEcccccCCcchhhhccCC
Confidence 46899999999999998886543 333443 467889999999998 89999887654
No 118
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.05 E-value=1.2e-09 Score=110.64 Aligned_cols=72 Identities=14% Similarity=0.167 Sum_probs=57.8
Q ss_pred ccceeHHHHHHHHHHHHHH-cCcEEEeCceEEEEEEcCCe--EEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCC
Q psy7710 198 TGIVDWGLVTRVMGEEFCE-LGGEIRLNQQVESFKENPES--VTISTKQGDHLESSYALVCAGLQADEMALKSGCS 270 (473)
Q Consensus 198 ~~~~~~~~~~~~l~~~~~~-~Gv~i~~~~~V~~i~~~~~~--v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~ 270 (473)
...+++..+.+.|.+.+++ .|++++++ +|+++..++++ +.|++.+|.+++||.||.|+|.+|..+.+.+|++
T Consensus 169 ~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~ 243 (526)
T 2pyx_A 169 GYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVP 243 (526)
T ss_dssp EEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCC
T ss_pred eEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCC
Confidence 3457889999999999998 89999999 59999876433 4677777667999999999999985445556653
No 119
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.04 E-value=2.7e-09 Score=107.08 Aligned_cols=69 Identities=17% Similarity=0.344 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCC---C--cEEEcCEEEEcCCcCh-HH-H-HHhcCCCC
Q psy7710 203 WGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQ---G--DHLESSYALVCAGLQA-DE-M-ALKSGCSL 271 (473)
Q Consensus 203 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~---g--~~i~ad~VV~aaG~~s-~~-l-~~~~g~~~ 271 (473)
+..+.+.+.+.+++.|++++++++|+++..+++++.+...+ | .++.+|.||+|+|... .. | ++.+|+..
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~ 314 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVL 314 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCB
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceE
Confidence 45678888899999999999999999999887776655431 4 5799999999999873 23 2 56666654
No 120
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.03 E-value=8.4e-10 Score=108.82 Aligned_cols=57 Identities=16% Similarity=0.228 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEE-EEcCCCcEEEcCEEEEcCCcChH
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQAD 261 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~-v~~~~g~~i~ad~VV~aaG~~s~ 261 (473)
..+.+.|.+.+++.|++|+++++|++|..+++++. |++ +|.+++||.||+|+|.++.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~-~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKS-EGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEE-TTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEE-CCeEEECCEEEECCCCCcc
Confidence 57899999999999999999999999998877765 554 5668999999999999974
No 121
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.03 E-value=3.2e-09 Score=105.30 Aligned_cols=68 Identities=13% Similarity=0.228 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCC-eEEEEcCCCcEEEcCEEEEcCCcChH-H-H-HHhcCCCC
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPE-SVTISTKQGDHLESSYALVCAGLQAD-E-M-ALKSGCSL 271 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~-~v~v~~~~g~~i~ad~VV~aaG~~s~-~-l-~~~~g~~~ 271 (473)
..+.+.+.+.+++.|++++++++|+++..+++ .+.|++.+|.++++|.||+|+|.... . | ++.+|++.
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~ 279 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKT 279 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCB
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceE
Confidence 45778888899999999999999999987654 37788888878999999999998743 2 4 56667654
No 122
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.03 E-value=9.7e-10 Score=104.66 Aligned_cols=113 Identities=19% Similarity=0.258 Sum_probs=80.1
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHHh
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFDK 135 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (473)
..+||+|||||++|+++|+.|++. |.+|+|+|+. .+|+.....+. .
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~-~~gg~~~~~~~------~------------------------- 58 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA--QLAPLVFEGT-SFGGALMTTTD------V------------------------- 58 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT--TCCCEEECCS-SCSCGGGSCSC------B-------------------------
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEecC-CCCCceeccch------h-------------------------
Confidence 568999999999999999999999 9999999986 45432111000 0
Q ss_pred cCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHHH
Q psy7710 136 RNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEFC 215 (473)
Q Consensus 136 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 215 (473)
... |.+ ...+....+...+.+.++
T Consensus 59 -------------------------------~~~---------------~~~----------~~~~~~~~~~~~l~~~~~ 82 (335)
T 2a87_A 59 -------------------------------ENY---------------PGF----------RNGITGPELMDEMREQAL 82 (335)
T ss_dssp -------------------------------CCS---------------TTC----------TTCBCHHHHHHHHHHHHH
T ss_pred -------------------------------hhc---------------CCC----------CCCCCHHHHHHHHHHHHH
Confidence 000 000 001233456666777788
Q ss_pred HcCcEEEeCceEEEEEEcCCeEEE-EcCCCcEEEcCEEEEcCCcCh
Q psy7710 216 ELGGEIRLNQQVESFKENPESVTI-STKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 216 ~~Gv~i~~~~~V~~i~~~~~~v~v-~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.|+++++++ |.++.. ++.+.| .+.+|.++++|.||+|+|..+
T Consensus 83 ~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 83 RFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAA 126 (335)
T ss_dssp HTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCc
Confidence 8899999887 888877 555666 777777899999999999864
No 123
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.02 E-value=8.3e-10 Score=109.84 Aligned_cols=61 Identities=18% Similarity=0.263 Sum_probs=48.7
Q ss_pred ceeHHHHHHHHHHHHHHcCcE--EEeCceEEEEEEcCC--eEEEEcCC---C--cEEEcCEEEEcCCcCh
Q psy7710 200 IVDWGLVTRVMGEEFCELGGE--IRLNQQVESFKENPE--SVTISTKQ---G--DHLESSYALVCAGLQA 260 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~~Gv~--i~~~~~V~~i~~~~~--~v~v~~~~---g--~~i~ad~VV~aaG~~s 260 (473)
......+.+.+.+.+++.|++ ++++++|+++..+++ .|.|++.+ | .++.+|.||+|+|.++
T Consensus 97 ~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSS
T ss_pred CCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCC
Confidence 345567788888888888998 999999999997765 67776543 3 4789999999999875
No 124
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.02 E-value=3.5e-09 Score=105.21 Aligned_cols=43 Identities=26% Similarity=0.418 Sum_probs=38.5
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTG 100 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~ 100 (473)
.++||+|||||++|+++|++|+++ |.+|+|+|+.+.+|+.+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~~GG~~~~ 46 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA--GLSVAVIEARDRVGGRTWT 46 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCTTCCE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCcEEEEECCCCCCCceec
Confidence 357999999999999999999999 9999999999888877543
No 125
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.01 E-value=9.4e-10 Score=103.96 Aligned_cols=56 Identities=13% Similarity=0.195 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 203 WGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 203 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+..+...+.+.+++.|+++++++ |+.+..+++.+.+ +.++.++.+|.||+|+|..+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 61 GPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGASA 116 (320)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCc
Confidence 34566667777888899999886 8899877777777 55566899999999999864
No 126
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.00 E-value=3.6e-09 Score=105.52 Aligned_cols=67 Identities=16% Similarity=0.210 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChH-H-H-HHhcCCC
Q psy7710 203 WGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-E-M-ALKSGCS 270 (473)
Q Consensus 203 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~-~-l-~~~~g~~ 270 (473)
+..+.+.+.+.++++|++++++++|+++..+++.+.|+++++ ++++|.||+|+|.+.. . + ++.+|+.
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~~-~i~aD~Vv~a~G~~p~~~~l~l~~~gl~ 284 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTTHG-ELRADKLLVATGRTPNTRSLALDAAGVT 284 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEETTE-EEEESEEEECSCEEESCTTSCGGGGTCC
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEECCc-EEEcCEEEECCCCCcCCCcCCchhcCCc
Confidence 456888899999999999999999999998777777877754 8999999999999853 2 1 3455554
No 127
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.00 E-value=1.2e-09 Score=109.12 Aligned_cols=69 Identities=16% Similarity=0.230 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCe-EEEE-----cCCCcEEEcCEEEEcCCcChH-HH--HHhcCCCC
Q psy7710 203 WGLVTRVMGEEFCELGGEIRLNQQVESFKENPES-VTIS-----TKQGDHLESSYALVCAGLQAD-EM--ALKSGCSL 271 (473)
Q Consensus 203 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~-v~v~-----~~~g~~i~ad~VV~aaG~~s~-~l--~~~~g~~~ 271 (473)
+..+...+.+.+++.|++++++++|+++..++++ +.++ +.++.++++|.||+|+|...+ .+ ++.+|++.
T Consensus 219 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~ 296 (474)
T 1zmd_A 219 DMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIEL 296 (474)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCcc
Confidence 3567788889999999999999999999987655 6665 355668999999999998743 33 56677654
No 128
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.00 E-value=2.9e-09 Score=104.91 Aligned_cols=44 Identities=16% Similarity=0.271 Sum_probs=39.6
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCC-CeEEEEeccCcccCcccCC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPK-MKICLVEKEKELGMHQTGH 101 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G-~~V~viE~~~~~g~~~s~~ 101 (473)
.++||+|||||++|+++|++|+++ | .+|+|+|+.+.+||.+...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~--g~~~v~v~E~~~~~GG~~~t~ 49 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA--GFHDYTILERTDHVGGKCHSP 49 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSSCSSTTCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC--CCCcEEEEECCCCCCCccccc
Confidence 568999999999999999999999 8 8999999998898876553
No 129
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.00 E-value=1.7e-09 Score=101.70 Aligned_cols=58 Identities=14% Similarity=0.087 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHcCcEEEeCceEEEEEEcC---CeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 203 WGLVTRVMGEEFCELGGEIRLNQQVESFKENP---ESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 203 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~---~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+..+...+.+.+++.|++++++++|+.+..+. +.+.|.+.+|.++++|.||+|+|.++
T Consensus 55 ~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 55 GQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 34566677788888899999999999997653 36788888887899999999999864
No 130
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.00 E-value=8.3e-09 Score=105.57 Aligned_cols=66 Identities=14% Similarity=0.336 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEE-------------------cCCeEEEEcCCCcEEEcCEEEEcCCcCh-HHHHH
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKE-------------------NPESVTISTKQGDHLESSYALVCAGLQA-DEMAL 265 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~-------------------~~~~v~v~~~~g~~i~ad~VV~aaG~~s-~~l~~ 265 (473)
+...+.+.+++.|+++++++.|+++.. +++++.+.+.+|.+++||.||+|+|... ..+++
T Consensus 194 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~ 273 (565)
T 3ntd_A 194 MAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLAR 273 (565)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCHHHH
T ss_pred HHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchHHHH
Confidence 344567778889999999999999987 4567777777887899999999999984 36778
Q ss_pred hcCCCC
Q psy7710 266 KSGCSL 271 (473)
Q Consensus 266 ~~g~~~ 271 (473)
.+|+..
T Consensus 274 ~~g~~~ 279 (565)
T 3ntd_A 274 DAGLAI 279 (565)
T ss_dssp HHTCCB
T ss_pred hCCccc
Confidence 778764
No 131
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.99 E-value=4.9e-09 Score=105.09 Aligned_cols=68 Identities=12% Similarity=0.243 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCC-eEEEEcCCCcEEEcCEEEEcCCcChHH--H-HHhcCCCC
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPE-SVTISTKQGDHLESSYALVCAGLQADE--M-ALKSGCSL 271 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~-~v~v~~~~g~~i~ad~VV~aaG~~s~~--l-~~~~g~~~ 271 (473)
..+...+.+.+++.|++|+++++|+++..+++ .+.|++.+|.++++|.||+|+|...+. | ++.+|+..
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~ 302 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEV 302 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCB
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccC
Confidence 56788889999999999999999999988654 477888888789999999999988432 4 56666654
No 132
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.97 E-value=4.3e-09 Score=105.70 Aligned_cols=54 Identities=19% Similarity=0.296 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCC---cEEEcCEEEEcCCcC
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQG---DHLESSYALVCAGLQ 259 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g---~~i~ad~VV~aaG~~ 259 (473)
..+.+.|.+.+.+ .+|+++++|++|..++++|.|++.+| .+++||+||+|++..
T Consensus 239 ~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 239 DRIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp THHHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 4566777666532 78999999999999888998887765 579999999999865
No 133
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.96 E-value=2.5e-09 Score=106.63 Aligned_cols=56 Identities=9% Similarity=0.054 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEc---CCe--EEEEcCCCc----EEEcCEEEEcCCcC
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKEN---PES--VTISTKQGD----HLESSYALVCAGLQ 259 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~---~~~--v~v~~~~g~----~i~ad~VV~aaG~~ 259 (473)
..+...+...+++.|++++++++|++|..+ ++. +.|++.+|. ++++|.||+|+|..
T Consensus 127 ~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 127 MEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp HHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 456666777777789999999999999876 443 367666654 79999999999973
No 134
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.95 E-value=2.3e-09 Score=100.96 Aligned_cols=111 Identities=23% Similarity=0.266 Sum_probs=78.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEE-EeccCcccCcccCCCcceEEeeccCCCchhHHHHHHHhHHHHHHHHH
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICL-VEKEKELGMHQTGHNSGVVHAGIYYKPGTLKAKLCVEGMNLAYEYFD 134 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~v-iE~~~~~g~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (473)
.++||+|||||++|+++|+.|+++ |.+|+| +|+. .+|+....... .
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~--g~~v~li~e~~-~~gG~~~~~~~------~------------------------ 49 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRG--GLKNVVMFEKG-MPGGQITSSSE------I------------------------ 49 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHH--TCSCEEEECSS-STTGGGGGCSC------B------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCC-CCCceeeeece------e------------------------
Confidence 468999999999999999999999 899999 9995 55432211000 0
Q ss_pred hcCCCCcccCeEEEEeCcChhhHHHHHHHHHhCCCCcceeeCHHHHHhhcCCcccceeEecCCccceeHHHHHHHHHHHH
Q psy7710 135 KRNIPYKKCGKLIVALNEQLEPLHDLYERSIQNNVKDVRLVSAEEIKTIEPYCKGVKAIHSPNTGIVDWGLVTRVMGEEF 214 (473)
Q Consensus 135 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 214 (473)
..++.. ...+.+..+...+.+.+
T Consensus 50 --------------------------------~~~~~~-------------------------~~~~~~~~~~~~~~~~~ 72 (315)
T 3r9u_A 50 --------------------------------ENYPGV-------------------------AQVMDGISFMAPWSEQC 72 (315)
T ss_dssp --------------------------------CCSTTC-------------------------CSCBCHHHHHHHHHHHH
T ss_pred --------------------------------ccCCCC-------------------------CCCCCHHHHHHHHHHHH
Confidence 000000 00233456777788888
Q ss_pred HHcCcEEEeCceEEEEEEcC--CeEEE-EcCCCcEEEcCEEEEcCCcC
Q psy7710 215 CELGGEIRLNQQVESFKENP--ESVTI-STKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 215 ~~~Gv~i~~~~~V~~i~~~~--~~v~v-~~~~g~~i~ad~VV~aaG~~ 259 (473)
++.|++++++ +|.++ .++ +.+.+ ...++ ++.+|+||+|+|..
T Consensus 73 ~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 73 MRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSA 117 (315)
T ss_dssp TTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEE
T ss_pred HHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCC
Confidence 8899999988 88899 766 67774 23344 89999999999974
No 135
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.94 E-value=2.7e-09 Score=107.82 Aligned_cols=43 Identities=26% Similarity=0.415 Sum_probs=39.1
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCC-CeEEEEeccCcccCcccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPK-MKICLVEKEKELGMHQTG 100 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G-~~V~viE~~~~~g~~~s~ 100 (473)
..+||+|||||++||++|+.|+++ | .+|+|+|+.+++||....
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~--G~~~V~VlEa~~riGGr~~t 50 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQN--GIQDCLVLEARDRVGGRLQT 50 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHT--TCCSEEEECSSSSSBTTCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhc--CCCCEEEEeCCCCCCCceee
Confidence 457999999999999999999999 8 999999999899988644
No 136
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.94 E-value=4.1e-09 Score=99.24 Aligned_cols=39 Identities=21% Similarity=0.394 Sum_probs=35.1
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMH 97 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~ 97 (473)
.+|||+|||||++|+++|++|++. |++|+|||++ .+|+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~--g~~V~liE~~-~~gG~ 43 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRA--NLKTVMIERG-IPGGQ 43 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESS-CTTGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC--CCCEEEEecC-CCCCe
Confidence 469999999999999999999999 9999999997 56543
No 137
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.93 E-value=2.4e-09 Score=108.29 Aligned_cols=60 Identities=15% Similarity=0.132 Sum_probs=44.0
Q ss_pred HHHHHHcCcEEEeCceEEEEEEcCC---eE-EEEc--CCCc--EE---EcCEEEEcCCcC-hHHHHHhcCCC
Q psy7710 211 GEEFCELGGEIRLNQQVESFKENPE---SV-TIST--KQGD--HL---ESSYALVCAGLQ-ADEMALKSGCS 270 (473)
Q Consensus 211 ~~~~~~~Gv~i~~~~~V~~i~~~~~---~v-~v~~--~~g~--~i---~ad~VV~aaG~~-s~~l~~~~g~~ 270 (473)
.+.+++.|++|++++.|++|..+++ .+ .|+. .+|. ++ .++.||+|+|++ +++|+..+|+.
T Consensus 201 ~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig 272 (536)
T 1ju2_A 201 LNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVG 272 (536)
T ss_dssp GGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEE
T ss_pred hhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCC
Confidence 3345678999999999999998753 33 3443 3453 34 468999999998 88888887763
No 138
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.92 E-value=5.6e-09 Score=105.38 Aligned_cols=58 Identities=10% Similarity=0.102 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHcCcEEEeCceEEEEEEc---CCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 203 WGLVTRVMGEEFCELGGEIRLNQQVESFKEN---PESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 203 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~---~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+..+...+.+.+++.|++++.+++|+.+..+ ++.+.|++.+|.++++|.||+|+|.+.
T Consensus 266 ~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 266 GQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 3456677888888899999999999999754 236788888887899999999999864
No 139
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.91 E-value=2.3e-08 Score=100.70 Aligned_cols=56 Identities=7% Similarity=-0.034 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcC
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
..+...+.+.+++.|+++++++.|.++...++.+.|.+.++..+.+|.|++|+|-.
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRK 318 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccccc
Confidence 46788899999999999999999999999999999988887789999999999976
No 140
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.91 E-value=5.3e-09 Score=104.91 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCC-eEEEEcCCCcEEEcCEEEEcCCcChH-H-H-HHhcCCCC
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPE-SVTISTKQGDHLESSYALVCAGLQAD-E-M-ALKSGCSL 271 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~-~v~v~~~~g~~i~ad~VV~aaG~~s~-~-l-~~~~g~~~ 271 (473)
..+...+.+.++++|++++++++|+++..+++ .+.|++.+|.++++|.||+|+|...+ . | ++.+|+..
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~ 306 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKL 306 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCB
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccC
Confidence 46778888999999999999999999987653 47788888878999999999998742 2 4 56666654
No 141
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.90 E-value=5.6e-08 Score=99.82 Aligned_cols=64 Identities=19% Similarity=0.348 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh-HHHHHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA-DEMALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s-~~l~~~~g~~~ 271 (473)
+...+.+.+++.|++++++++|+++..+++. |.+.+|.++.+|.||+|+|... ..+++.+|++.
T Consensus 230 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~ 294 (588)
T 3ics_A 230 MAAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIGVQPESSLAKGAGLAL 294 (588)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSCEEECCHHHHHTTCCB
T ss_pred HHHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccCCCCChHHHHhcCceE
Confidence 4455777788899999999999999876554 5556777899999999999883 46788888764
No 142
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.90 E-value=6.4e-08 Score=95.98 Aligned_cols=54 Identities=7% Similarity=0.183 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.+.+.+.+++.|++++++++|+++..+++++.|+++++ +++||.||+|+|...
T Consensus 191 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 191 MVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCC
Confidence 455577788889999999999999997777778888887 999999999999873
No 143
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.90 E-value=1.3e-08 Score=102.07 Aligned_cols=67 Identities=19% Similarity=0.149 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcC--CC--cEEEcCEEEEcCCcCh-HHH--HHhcCCCC
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTK--QG--DHLESSYALVCAGLQA-DEM--ALKSGCSL 271 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~--~g--~~i~ad~VV~aaG~~s-~~l--~~~~g~~~ 271 (473)
..+.+.+.+.+++. ++++++++|+++..+++++.+++. +| .++.+|.||+|+|... ..+ ++.+|++.
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~ 288 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIEL 288 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCB
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEE
Confidence 56777888888877 999999999999988777776653 56 5799999999999873 233 45566554
No 144
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.89 E-value=8.1e-09 Score=105.50 Aligned_cols=58 Identities=16% Similarity=0.071 Sum_probs=42.7
Q ss_pred HHHHcCcEEEeCceEEEEEEcC----CeE-EEEc--CCC--cEEEc-CEEEEcCCcC-hHHHHHhcCCC
Q psy7710 213 EFCELGGEIRLNQQVESFKENP----ESV-TIST--KQG--DHLES-SYALVCAGLQ-ADEMALKSGCS 270 (473)
Q Consensus 213 ~~~~~Gv~i~~~~~V~~i~~~~----~~v-~v~~--~~g--~~i~a-d~VV~aaG~~-s~~l~~~~g~~ 270 (473)
.+++.|++|++++.|++|..++ +.+ .|+. .+| .+++| +.||+|+|+. +++|+..+||.
T Consensus 240 ~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIG 308 (587)
T 1gpe_A 240 NYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIG 308 (587)
T ss_dssp TTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEE
T ss_pred hhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCC
Confidence 3456799999999999998753 222 2432 345 35788 8899999997 88888887764
No 145
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.89 E-value=1.5e-08 Score=101.40 Aligned_cols=69 Identities=19% Similarity=0.139 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCe--EEEEcCC-------CcEEEcCEEEEcCCcChH-H-H-HHhcCCC
Q psy7710 203 WGLVTRVMGEEFCELGGEIRLNQQVESFKENPES--VTISTKQ-------GDHLESSYALVCAGLQAD-E-M-ALKSGCS 270 (473)
Q Consensus 203 ~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~--v~v~~~~-------g~~i~ad~VV~aaG~~s~-~-l-~~~~g~~ 270 (473)
...+.+.+.+.+++.|++++++++|+++..++++ +.+.+.+ |.++.+|.||+|+|...+ . | ++.+|++
T Consensus 227 d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~ 306 (478)
T 3dk9_A 227 DSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQ 306 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCe
Confidence 3567788888999999999999999999876544 5666654 257899999999998632 2 3 5666665
Q ss_pred C
Q psy7710 271 L 271 (473)
Q Consensus 271 ~ 271 (473)
.
T Consensus 307 ~ 307 (478)
T 3dk9_A 307 T 307 (478)
T ss_dssp B
T ss_pred e
Confidence 3
No 146
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.88 E-value=1.3e-08 Score=101.29 Aligned_cols=40 Identities=35% Similarity=0.489 Sum_probs=35.4
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMH 97 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~ 97 (473)
.++||+|||||++|+++|+.|++. |.+|+|||+.+.+|+.
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~--G~~V~liEk~~~~GG~ 42 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKA--KYNVLMADPKGELGGN 42 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECTTSSSSHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCCCCc
Confidence 358999999999999999999999 9999999977666643
No 147
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.87 E-value=1.9e-08 Score=100.65 Aligned_cols=38 Identities=34% Similarity=0.462 Sum_probs=34.4
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCccc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELG 95 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g 95 (473)
.++||+|||||++|+++|+.|++. |.+|+|||+.+.+|
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~--G~~V~liE~~~~~G 41 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQL--GFNTACVEKRGKLG 41 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCCCcC
Confidence 458999999999999999999999 89999999965554
No 148
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.87 E-value=1.2e-08 Score=103.67 Aligned_cols=61 Identities=15% Similarity=0.200 Sum_probs=45.8
Q ss_pred HHHHHHH-cCcEEEeCceEEEEEEcCCeE-EEEcCC---Cc--EE---EcCEEEEcCCcC-hHHHHHhcCCC
Q psy7710 210 MGEEFCE-LGGEIRLNQQVESFKENPESV-TISTKQ---GD--HL---ESSYALVCAGLQ-ADEMALKSGCS 270 (473)
Q Consensus 210 l~~~~~~-~Gv~i~~~~~V~~i~~~~~~v-~v~~~~---g~--~i---~ad~VV~aaG~~-s~~l~~~~g~~ 270 (473)
+.+.+.+ .|++|++++.|++|..+++++ .|+..+ |. ++ .+|.||+|+|++ +++|+..+|+.
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig 272 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIG 272 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBS
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCC
Confidence 4444444 599999999999999876644 355433 53 33 789999999998 78899888875
No 149
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.85 E-value=3.5e-08 Score=98.45 Aligned_cols=40 Identities=33% Similarity=0.380 Sum_probs=35.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMH 97 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~ 97 (473)
.++||+|||||++|+++|+.|++. |.+|+|||+.+.+|+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~--g~~V~liE~~~~~GG~ 44 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQL--GFKTTCIEKRGALGGT 44 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSCCS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCcccc
Confidence 468999999999999999999999 8999999998666543
No 150
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.85 E-value=2.1e-08 Score=100.42 Aligned_cols=38 Identities=45% Similarity=0.629 Sum_probs=34.4
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCccc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELG 95 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g 95 (473)
.++||+|||||++|+++|+.|++. |.+|+|||+.+.+|
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~--G~~V~liE~~~~~G 42 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADE--GLKVAIVERYKTLG 42 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSCSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCCC
Confidence 468999999999999999999999 99999999965655
No 151
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.84 E-value=2e-09 Score=108.26 Aligned_cols=59 Identities=17% Similarity=0.285 Sum_probs=44.2
Q ss_pred HHHHHHHcC-cEEEeCceEEEEEEcC-C-e-EEEEc--CCC-----cEEEcCEEEEcCCcC-hHHHHHhcC
Q psy7710 210 MGEEFCELG-GEIRLNQQVESFKENP-E-S-VTIST--KQG-----DHLESSYALVCAGLQ-ADEMALKSG 268 (473)
Q Consensus 210 l~~~~~~~G-v~i~~~~~V~~i~~~~-~-~-v~v~~--~~g-----~~i~ad~VV~aaG~~-s~~l~~~~g 268 (473)
+.+.++++| ++|++++.|++|..++ + . +.|+. .+| .+++|+.||+|+|++ ++.|+..+|
T Consensus 227 ~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~Sg 297 (504)
T 1n4w_A 227 YLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRAR 297 (504)
T ss_dssp HHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHHhcc
Confidence 334455564 9999999999999874 2 3 33544 355 368899999999998 888888777
No 152
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.84 E-value=3e-08 Score=99.01 Aligned_cols=56 Identities=23% Similarity=0.389 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHc--------CcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcC
Q psy7710 204 GLVTRVMGEEFCEL--------GGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 204 ~~~~~~l~~~~~~~--------Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
..+.+.|.+.+.+. |++|+++++|++|..+++++.|++.+|.+++||+||+|++.+
T Consensus 206 ~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 206 EAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLG 269 (472)
T ss_dssp THHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHH
Confidence 35667777666554 789999999999999888899999998889999999999875
No 153
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.84 E-value=1e-08 Score=102.51 Aligned_cols=43 Identities=21% Similarity=0.210 Sum_probs=38.9
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCC-CeEEEEeccCcccCcccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPK-MKICLVEKEKELGMHQTG 100 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G-~~V~viE~~~~~g~~~s~ 100 (473)
..+||+|||||++|+++|++|+++ | .+|+|+|+.+.+||....
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~--g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTEL--GYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHT--TCCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHc--CCCCEEEEeCCCCCCCeeee
Confidence 568999999999999999999999 7 799999999888877655
No 154
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.84 E-value=6.3e-08 Score=95.95 Aligned_cols=64 Identities=16% Similarity=0.304 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcC-hHHHHHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ-ADEMALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~-s~~l~~~~g~~~ 271 (473)
+...+.+.+++. +++++++.|.++..++....+.+ ++.++++|.||+|+|.. ...+++.+|++.
T Consensus 192 ~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~ 256 (449)
T 3kd9_A 192 VTDILEEKLKKH-VNLRLQEITMKIEGEERVEKVVT-DAGEYKAELVILATGIKPNIELAKQLGVRI 256 (449)
T ss_dssp HHHHHHHHHTTT-SEEEESCCEEEEECSSSCCEEEE-TTEEEECSEEEECSCEEECCHHHHHTTCCB
T ss_pred HHHHHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEe-CCCEEECCEEEEeeCCccCHHHHHhCCccC
Confidence 445566777778 99999999999986653223444 44589999999999998 447888888765
No 155
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.82 E-value=7.6e-09 Score=102.68 Aligned_cols=48 Identities=10% Similarity=0.171 Sum_probs=38.8
Q ss_pred HHHHcCcEEEeCceEEEEEEcCCeEEEE-cCCCcEEEcCEEEEcCCcCh
Q psy7710 213 EFCELGGEIRLNQQVESFKENPESVTIS-TKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 213 ~~~~~Gv~i~~~~~V~~i~~~~~~v~v~-~~~g~~i~ad~VV~aaG~~s 260 (473)
.+++.|++++++++|+++..+++.+.++ ..++.++++|.+|+|+|...
T Consensus 67 ~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 67 ELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp HHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCB
T ss_pred HHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCccc
Confidence 3456799999999999999888888775 23446799999999999853
No 156
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.81 E-value=1.9e-08 Score=100.62 Aligned_cols=39 Identities=31% Similarity=0.348 Sum_probs=35.0
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGM 96 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~ 96 (473)
.++||+|||||++|+++|++|++. |.+|+|||+++.+|+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~--G~~V~liEk~~~~gG 40 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQL--GLKTALIEKYKGKEG 40 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHH--TCCEEEEECCBCTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC--CCEEEEEeCCCccCC
Confidence 468999999999999999999999 999999999865543
No 157
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.81 E-value=6.7e-08 Score=96.34 Aligned_cols=39 Identities=41% Similarity=0.500 Sum_probs=35.0
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMH 97 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~ 97 (473)
++||+|||||++|+++|++|++. |.+|+|||+.+.+|+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~--g~~V~lie~~~~~GG~ 40 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL--GMKTACVEKRGALGGT 40 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCcCCc
Confidence 48999999999999999999999 9999999998666543
No 158
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.80 E-value=1e-07 Score=96.17 Aligned_cols=37 Identities=27% Similarity=0.471 Sum_probs=33.6
Q ss_pred CCCcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 54 SPALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 54 ~~~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
+..++||+|||||++|+++|..|++. |.+|+|||+.+
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~--G~~V~liEk~~ 65 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQY--GKKVMVLDFVT 65 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeccC
Confidence 34579999999999999999999999 99999999963
No 159
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.80 E-value=2.4e-07 Score=92.51 Aligned_cols=55 Identities=18% Similarity=0.211 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCC--C-cEEEcCEEEEcCCcCh
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQ--G-DHLESSYALVCAGLQA 260 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~--g-~~i~ad~VV~aaG~~s 260 (473)
+.+.+.+.+++.|++++++++|+++..+++.+.+...+ | .++.+|.||+|+|...
T Consensus 223 ~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 223 VAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp HHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 44557777888999999999999999887776665543 3 5789999999999863
No 160
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.78 E-value=5.7e-08 Score=96.74 Aligned_cols=52 Identities=6% Similarity=-0.017 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCC--cEEEcCEEEEcCCcCh
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQA 260 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~ad~VV~aaG~~s 260 (473)
+...+.+.+++.|++++.++.+. .+.+.+.|.+.+| .++++|.||+|+|..+
T Consensus 93 l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~~ 146 (464)
T 2a8x_A 93 RVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSST 146 (464)
T ss_dssp HHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCCC
Confidence 44556677778899999887653 3556788888777 6899999999999875
No 161
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.77 E-value=1.2e-08 Score=98.83 Aligned_cols=46 Identities=11% Similarity=0.191 Sum_probs=37.8
Q ss_pred HHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcC
Q psy7710 212 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 212 ~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
+.+++.|++++++++|++|+.+++. |++.+|.++.+|++|+|||..
T Consensus 70 ~~~~~~~i~~~~~~~V~~id~~~~~--v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 70 DWYEKNNIKVITSEFATSIDPNNKL--VTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp HHHHHTTCEEECSCCEEEEETTTTE--EEETTSCEEECSEEEECCCEE
T ss_pred HHHHHCCCEEEeCCEEEEEECCCCE--EEECCCCEEECCEEEEecCCC
Confidence 3445679999999999999877654 566777789999999999974
No 162
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.77 E-value=1.1e-08 Score=106.93 Aligned_cols=61 Identities=15% Similarity=0.149 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEE---cCCCcEEEcCEEEEcCCcC-hHHHHHh
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTIS---TKQGDHLESSYALVCAGLQ-ADEMALK 266 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~---~~~g~~i~ad~VV~aaG~~-s~~l~~~ 266 (473)
..+...+.+.++++|++|+++++|++|..++ +.++ +.++.++.||.||+|+|.. ...+...
T Consensus 567 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~ 631 (690)
T 3k30_A 567 TFEVNRIQRRLIENGVARVTDHAVVAVGAGG--VTVRDTYASIERELECDAVVMVTARLPREELYLD 631 (690)
T ss_dssp GTCHHHHHHHHHHTTCEEEESEEEEEEETTE--EEEEETTTCCEEEEECSEEEEESCEEECCHHHHH
T ss_pred chhHHHHHHHHHHCCCEEEcCcEEEEEECCe--EEEEEccCCeEEEEECCEEEECCCCCCChHHHHH
Confidence 4456678888899999999999999997543 4443 3455679999999999987 3355543
No 163
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.77 E-value=9.9e-08 Score=95.49 Aligned_cols=34 Identities=35% Similarity=0.608 Sum_probs=31.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.++||+|||||++|+++|++|++. |.+|+|||+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~--G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLN--GARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCEEEEEEec
Confidence 579999999999999999999999 9999999963
No 164
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.76 E-value=9.9e-08 Score=94.05 Aligned_cols=61 Identities=16% Similarity=0.215 Sum_probs=47.0
Q ss_pred HHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh-HHHHHhcCCCCC
Q psy7710 208 RVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA-DEMALKSGCSLE 272 (473)
Q Consensus 208 ~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s-~~l~~~~g~~~~ 272 (473)
+.+.+.++++|++++++++|+++.. + .+.+.+|+++++|.||+|+|... ..+++.+|+..+
T Consensus 192 ~~~~~~l~~~gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~ 253 (437)
T 4eqs_A 192 QPILDELDKREIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLD 253 (437)
T ss_dssp HHHHHHHHHTTCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCC
T ss_pred HHHHHHhhccceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhc
Confidence 3466778889999999999988753 2 25667788999999999999873 357777777643
No 165
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.76 E-value=6.8e-08 Score=95.91 Aligned_cols=38 Identities=42% Similarity=0.588 Sum_probs=34.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGM 96 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~ 96 (473)
++||+|||||++|+++|.+|++. |.+|+|||+++.+|+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~~~~GG 38 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL--GMKVGVVEKEKALGG 38 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSSSSH
T ss_pred CCCEEEECCChhHHHHHHHHHHC--CCeEEEEeCCCCCCC
Confidence 37999999999999999999999 899999999865653
No 166
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.74 E-value=9.1e-08 Score=94.98 Aligned_cols=52 Identities=12% Similarity=0.077 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCC-cEEEcCEEEEcCCcCh
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQG-DHLESSYALVCAGLQA 260 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g-~~i~ad~VV~aaG~~s 260 (473)
+...+.+.+++.|++++.++.+. + +.+.+.|++.+| .++++|+||+|+|...
T Consensus 93 l~~~~~~~~~~~gv~~~~g~~~~-i--d~~~v~V~~~~G~~~i~~d~lViATGs~p 145 (455)
T 1ebd_A 93 LTGGVEGLLKGNKVEIVKGEAYF-V--DANTVRVVNGDSAQTYTFKNAIIATGSRP 145 (455)
T ss_dssp HHHHHHHHHHTTTCEEEESEEEE-E--ETTEEEEEETTEEEEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHhCCCEEEEEEEEE-c--cCCeEEEEeCCCcEEEEeCEEEEecCCCC
Confidence 44456667778899999888653 3 456788888777 6799999999999864
No 167
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.74 E-value=5.5e-08 Score=96.60 Aligned_cols=65 Identities=25% Similarity=0.305 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChH-HH--HHhcCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EM--ALKSGCS 270 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~-~l--~~~~g~~ 270 (473)
+.+.+.+.+++.|++++++++|+++..+++++.+++.+|.++++|.||+|+|..+. .+ ++.+|+.
T Consensus 210 ~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~ 277 (455)
T 2yqu_A 210 VSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLS 277 (455)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCC
T ss_pred HHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCc
Confidence 34446677788899999999999999887788888777778999999999999853 22 4555554
No 168
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.74 E-value=1e-08 Score=102.99 Aligned_cols=59 Identities=14% Similarity=0.125 Sum_probs=43.9
Q ss_pred HHHHHHHc-CcEEEeCceEEEEEEcC-C-e-EEEEc--CCC-----cEEEcCEEEEcCCcC-hHHHHHhcC
Q psy7710 210 MGEEFCEL-GGEIRLNQQVESFKENP-E-S-VTIST--KQG-----DHLESSYALVCAGLQ-ADEMALKSG 268 (473)
Q Consensus 210 l~~~~~~~-Gv~i~~~~~V~~i~~~~-~-~-v~v~~--~~g-----~~i~ad~VV~aaG~~-s~~l~~~~g 268 (473)
+...++++ +++|++++.|++|..++ + . +.|+. .+| .+++|+.||+|+|++ ++.|+..+|
T Consensus 232 ~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~Sg 302 (507)
T 1coy_A 232 YLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLVSMK 302 (507)
T ss_dssp HHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHHhcc
Confidence 33444445 59999999999999875 3 2 33544 245 368899999999999 888888877
No 169
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.74 E-value=2.1e-07 Score=93.52 Aligned_cols=42 Identities=24% Similarity=0.343 Sum_probs=38.2
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCccc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQT 99 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s 99 (473)
..+||+|||||++|+++|+.|+++ |.+|+|+|+.+.+|+...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~--g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA--GHQVTVLEASERPGGRVR 73 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH--TCEEEEECSSSSSBTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCeEEEEECCCCCCCcee
Confidence 467999999999999999999999 999999999988887653
No 170
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.73 E-value=8.7e-09 Score=101.10 Aligned_cols=46 Identities=17% Similarity=0.245 Sum_probs=36.9
Q ss_pred HHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcC
Q psy7710 212 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 212 ~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
+.+.+.|++++.+++|+.+..++. .|.+.+|..+.+|.+|+|+|..
T Consensus 73 ~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 73 QFWEDKAVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp HHHHHTTEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHCCcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCCc
Confidence 344567999999999999987655 3556677789999999999964
No 171
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.73 E-value=1.1e-07 Score=95.45 Aligned_cols=39 Identities=21% Similarity=0.445 Sum_probs=34.4
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCC-CCeEEEEeccCcccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYP-KMKICLVEKEKELGM 96 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~-G~~V~viE~~~~~g~ 96 (473)
++||+|||||++|+++|++|++..| |.+|+|||+++ +|+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG 41 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGG 41 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCC
Confidence 4799999999999999999999865 78999999985 553
No 172
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.71 E-value=8.1e-08 Score=95.97 Aligned_cols=37 Identities=46% Similarity=0.632 Sum_probs=34.0
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCccc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELG 95 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g 95 (473)
.++||+|||||++|+++|+.|++. |.+|+|||++ .+|
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~--g~~V~liE~~-~~G 46 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY--GAKTLLVEAK-ALG 46 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--SCCEEEEESS-CTT
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC--CCcEEEEeCC-CcC
Confidence 468999999999999999999999 9999999997 554
No 173
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.70 E-value=6.1e-08 Score=96.06 Aligned_cols=38 Identities=29% Similarity=0.501 Sum_probs=34.0
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
++||+|||||++|+++|+.|++.+++.+|+|||+.+.+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 47899999999999999999998778899999998543
No 174
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.69 E-value=2.4e-07 Score=92.85 Aligned_cols=34 Identities=29% Similarity=0.491 Sum_probs=32.0
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.++||+|||||++|+++|..|++. |.+|+|||+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~--G~~V~liEk~ 38 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL--GKKVAVADYV 38 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEEec
Confidence 569999999999999999999999 9999999984
No 175
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.68 E-value=2e-08 Score=98.96 Aligned_cols=47 Identities=11% Similarity=0.220 Sum_probs=37.5
Q ss_pred HHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 212 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 212 ~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.+++.|++++++++|+.+..++. .|++.+|.++.+|.||+|+|...
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGGRP 114 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHhCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCCCc
Confidence 344567999999999999987655 35556777899999999999864
No 176
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.67 E-value=1.3e-08 Score=98.66 Aligned_cols=51 Identities=12% Similarity=0.139 Sum_probs=42.1
Q ss_pred ceeHHHHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChH
Q psy7710 200 IVDWGLVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD 261 (473)
Q Consensus 200 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~ 261 (473)
.++...+.+.|.+.+++.|++++++++|+++... .+++||.||.|+|.+|.
T Consensus 94 ~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 94 GVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGGG
T ss_pred eecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCch
Confidence 3566788999999999999999999999887531 13578999999999985
No 177
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.67 E-value=3.4e-07 Score=90.97 Aligned_cols=37 Identities=30% Similarity=0.593 Sum_probs=34.0
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCccc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELG 95 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g 95 (473)
.++||+|||||++|+++|.+|++. |.+|+|||++ .+|
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~--g~~V~liE~~-~~G 39 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAF--GKRVALIESK-ALG 39 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESS-CTT
T ss_pred ccCcEEEECCCHHHHHHHHHHHhC--CCcEEEEcCC-CCC
Confidence 468999999999999999999998 9999999998 555
No 178
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.67 E-value=2.4e-07 Score=91.22 Aligned_cols=66 Identities=24% Similarity=0.344 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEE--cCCeE-EEEcCCCcEEEcCEEEEcCCcCh-HHHHHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKE--NPESV-TISTKQGDHLESSYALVCAGLQA-DEMALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~--~~~~v-~v~~~~g~~i~ad~VV~aaG~~s-~~l~~~~g~~~ 271 (473)
+...+.+.+++.|++++++++|+++.. +++.+ .|++.+|.++.+|.||+|+|... ..+++.+|+..
T Consensus 193 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~ 262 (431)
T 1q1r_A 193 VSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQV 262 (431)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCB
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCC
Confidence 344566777888999999999999987 54544 68888888899999999999873 46888888764
No 179
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.66 E-value=4.2e-08 Score=96.89 Aligned_cols=48 Identities=15% Similarity=0.275 Sum_probs=37.8
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.+.+++.|++++ ..+|+.++.+++ .|++.+|.++.+|+||+|+|...
T Consensus 65 l~~~~~~~gv~~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 65 IRHYVERKGIHFI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp CHHHHHTTTCEEE-CSCEEEEETTTT--EEEETTSCEEECSEEEECCCCEE
T ss_pred HHHHHHHCCCEEE-EeEEEEEEcCCC--EEEECCCCEEECCEEEECCCCCc
Confidence 4555667899997 568999987665 45667777899999999999864
No 180
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.66 E-value=1.5e-08 Score=93.39 Aligned_cols=41 Identities=22% Similarity=0.442 Sum_probs=37.4
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCccc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQT 99 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s 99 (473)
++||+|||||++||++|+.|+++ |++|+||||.+.+|+..+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~--G~~V~v~Ek~~~~GG~~~ 42 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCGGGC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCCCCCCccc
Confidence 47999999999999999999999 999999999988876654
No 181
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.65 E-value=1.5e-07 Score=93.61 Aligned_cols=64 Identities=14% Similarity=0.237 Sum_probs=51.5
Q ss_pred HHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCc-EEEcCEEEEcCCcChHH--H-HHhcCCCC
Q psy7710 208 RVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGD-HLESSYALVCAGLQADE--M-ALKSGCSL 271 (473)
Q Consensus 208 ~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~-~i~ad~VV~aaG~~s~~--l-~~~~g~~~ 271 (473)
..+.+.+++.|++++++++|+++..+++++.|++.+|. ++.+|.||+|+|...+. | ++.+|++.
T Consensus 211 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~ 278 (463)
T 2r9z_A 211 ATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEV 278 (463)
T ss_dssp HHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCC
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCcc
Confidence 44667778899999999999999987667888888887 79999999999987432 4 56666654
No 182
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.65 E-value=1.9e-07 Score=95.91 Aligned_cols=50 Identities=12% Similarity=0.214 Sum_probs=39.8
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEcCCeEEEEc-CCCc--EEEcCEEEEcCCcC
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKENPESVTIST-KQGD--HLESSYALVCAGLQ 259 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~--~i~ad~VV~aaG~~ 259 (473)
+...+++.|++++++++|+++..+++.+.+.. .+|. .+.+|.||+|+|..
T Consensus 99 ~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (588)
T 3ics_A 99 VERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAK 151 (588)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCC
Confidence 33445567999999999999998888888765 3454 68899999999974
No 183
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.63 E-value=2.8e-08 Score=97.27 Aligned_cols=50 Identities=22% Similarity=0.303 Sum_probs=37.3
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCC--cEEEcCEEEEcCCcCh
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQA 260 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~ad~VV~aaG~~s 260 (473)
+.+.+++.|++++.+ +|+++..++..+.+...++ .++++|.||+|+|...
T Consensus 62 ~~~~~~~~gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 62 LSEALPEKGIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp HHHHTGGGTCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEE
T ss_pred HHHHHhhCCeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCc
Confidence 455566779999877 8999987777666654432 2489999999999853
No 184
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.63 E-value=1.1e-07 Score=94.27 Aligned_cols=48 Identities=13% Similarity=0.218 Sum_probs=37.9
Q ss_pred HHHHcCcEEEeCceEEEEEEcCCeEEEEc-CCCc--EEEcCEEEEcCCcCh
Q psy7710 213 EFCELGGEIRLNQQVESFKENPESVTIST-KQGD--HLESSYALVCAGLQA 260 (473)
Q Consensus 213 ~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~--~i~ad~VV~aaG~~s 260 (473)
.+++.|++++.++.|..+..+++.+.+.+ .+|. ++++|++|+|+|...
T Consensus 65 ~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 65 KMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp HHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCc
Confidence 34567999999999999987777777765 3453 489999999999763
No 185
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.63 E-value=3.3e-07 Score=89.52 Aligned_cols=62 Identities=16% Similarity=0.303 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh-HHHHHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA-DEMALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s-~~l~~~~g~~~ 271 (473)
+...+.+.+++.|++++++++|+++. ++ .|++.+|.+++||.||+|+|... ..+++.+|++.
T Consensus 189 ~~~~l~~~l~~~GV~i~~~~~v~~i~-~~---~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~ 251 (408)
T 2gqw_A 189 LADFVARYHAAQGVDLRFERSVTGSV-DG---VVLLDDGTRIAADMVVVGIGVLANDALARAAGLAC 251 (408)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEE-TT---EEEETTSCEEECSEEEECSCEEECCHHHHHHTCCB
T ss_pred HHHHHHHHHHHcCcEEEeCCEEEEEE-CC---EEEECCCCEEEcCEEEECcCCCccHHHHHhCCCCC
Confidence 44456777888999999999999998 43 56667787899999999999884 46888888764
No 186
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.63 E-value=1.3e-07 Score=95.05 Aligned_cols=66 Identities=24% Similarity=0.306 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChH-HH--HHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQAD-EM--ALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~-~l--~~~~g~~~ 271 (473)
+...+.+.+++.|++|+++++|+++..+++++.|++.+|.++++|.||+|+|...+ .+ ++.+|++.
T Consensus 225 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~ 293 (499)
T 1xdi_A 225 AALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQL 293 (499)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceE
Confidence 44557778888999999999999999877778888888878999999999999853 34 45556553
No 187
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.62 E-value=9.1e-08 Score=95.62 Aligned_cols=45 Identities=16% Similarity=0.302 Sum_probs=37.0
Q ss_pred HcCcEEEeCceEEEEEEcCCeEEEEc-CCCc--EEEcCEEEEcCCcCh
Q psy7710 216 ELGGEIRLNQQVESFKENPESVTIST-KQGD--HLESSYALVCAGLQA 260 (473)
Q Consensus 216 ~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~--~i~ad~VV~aaG~~s 260 (473)
+.|++++++++|+.+..+++.+.+.+ .+|. ++++|.||+|+|...
T Consensus 105 ~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 105 KYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp TTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred hcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcc
Confidence 45999999999999988777787776 4564 689999999999753
No 188
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.61 E-value=9.3e-08 Score=94.84 Aligned_cols=49 Identities=14% Similarity=0.333 Sum_probs=38.2
Q ss_pred HHHHHcCcEEEeCceEEEEEEcCCeEEEEcC-C--CcEEEcCEEEEcCCcCh
Q psy7710 212 EEFCELGGEIRLNQQVESFKENPESVTISTK-Q--GDHLESSYALVCAGLQA 260 (473)
Q Consensus 212 ~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~-~--g~~i~ad~VV~aaG~~s 260 (473)
+.+++.|++++.+++|..+..+++.+.+.+. + +.++++|.+|+|+|...
T Consensus 66 ~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 66 EELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp HHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred HHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCc
Confidence 3445679999999999999877777777652 2 35799999999999753
No 189
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.60 E-value=4.6e-08 Score=94.15 Aligned_cols=32 Identities=31% Similarity=0.525 Sum_probs=30.2
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.||+|||||++|+++|..|++. | +|+|||+++
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~--g-~V~lie~~~ 40 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQT--Y-EVTVIDKEP 40 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--S-EEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhhc--C-CEEEEECCC
Confidence 5899999999999999999998 8 999999984
No 190
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.60 E-value=2.2e-07 Score=94.91 Aligned_cols=46 Identities=17% Similarity=0.247 Sum_probs=37.3
Q ss_pred HHHcCcEEEeCceEEEEEEcCCeEEEEc-CCC--cEEEcCEEEEcCCcC
Q psy7710 214 FCELGGEIRLNQQVESFKENPESVTIST-KQG--DHLESSYALVCAGLQ 259 (473)
Q Consensus 214 ~~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g--~~i~ad~VV~aaG~~ 259 (473)
.++.|++++++++|+++..+++.+.+.. .+| .++.+|+||+|+|..
T Consensus 68 ~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 68 KARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp HHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCC
Confidence 3446999999999999998888887765 233 378999999999984
No 191
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.58 E-value=2.2e-07 Score=92.85 Aligned_cols=66 Identities=12% Similarity=0.219 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCe--EEEEcCCC-cEEEcCEEEEcCCcChH-HH-HHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPES--VTISTKQG-DHLESSYALVCAGLQAD-EM-ALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~--v~v~~~~g-~~i~ad~VV~aaG~~s~-~l-~~~~g~~~ 271 (473)
+.+.+.+.+++.|++++++++|+++..++++ +.|++.+| .++.+|.||+|+|...+ .| ++.+|++.
T Consensus 228 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~ 298 (479)
T 2hqm_A 228 IQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKL 298 (479)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCB
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceE
Confidence 3445677788889999999999999876544 67888888 78999999999998643 45 56666654
No 192
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.58 E-value=1.8e-07 Score=90.43 Aligned_cols=53 Identities=19% Similarity=0.275 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh-HHHHHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA-DEMALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s-~~l~~~~g~~~ 271 (473)
+...+.+.+++.|+++++++.|+++ |.++.+|.||+|+|... ..+++.+|+..
T Consensus 190 ~~~~~~~~l~~~gV~~~~~~~v~~i-------------g~~~~~D~vv~a~G~~p~~~~~~~~gl~~ 243 (385)
T 3klj_A 190 GGLFLKDKLDRLGIKIYTNSNFEEM-------------GDLIRSSCVITAVGVKPNLDFIKDTEIAS 243 (385)
T ss_dssp HHHHHHHHHHTTTCEEECSCCGGGC-------------HHHHHHSEEEECCCEEECCGGGTTSCCCB
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEc-------------CeEEecCeEEECcCcccChhhhhhcCCCc
Confidence 3444667778889999999998776 45788999999999874 36777777653
No 193
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.57 E-value=9.8e-08 Score=95.66 Aligned_cols=48 Identities=19% Similarity=0.262 Sum_probs=38.1
Q ss_pred HHHHcCcEEEeCceEEEEEEcCCeEEEE-cCCCcEEEcCEEEEcCCcCh
Q psy7710 213 EFCELGGEIRLNQQVESFKENPESVTIS-TKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 213 ~~~~~Gv~i~~~~~V~~i~~~~~~v~v~-~~~g~~i~ad~VV~aaG~~s 260 (473)
.+++.|++++.+++|..+..+++.+.+. ..++.++++|+||+|+|...
T Consensus 101 ~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 101 ELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp HHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEE
T ss_pred HHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCc
Confidence 3456799999999999998777777776 43345799999999999753
No 194
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.57 E-value=3.9e-06 Score=84.85 Aligned_cols=46 Identities=11% Similarity=0.136 Sum_probs=37.8
Q ss_pred HHHHHHHcCcEEEe--CceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 210 MGEEFCELGGEIRL--NQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 210 l~~~~~~~Gv~i~~--~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.+.+.+.+|+++. ++.|++|..++ |.+.+| ++++|.||+|||..+
T Consensus 344 y~~al~~~nV~lv~~~~~~I~~it~~g----v~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 344 YYETYNRDNVHLVDIREAPIQEVTPEG----IKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEETTE----EEESSC-EEECSEEEECCCCBS
T ss_pred HHHHhcCCCEEEEecCCCCceEEccCe----EEeCCC-eeecCEEEECCcccc
Confidence 56677778999986 78899886543 678899 999999999999874
No 195
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.57 E-value=4.9e-08 Score=96.15 Aligned_cols=34 Identities=44% Similarity=0.736 Sum_probs=31.3
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
+|+|||||++|+++|.+|++.+++.+|+|||+.+
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 6999999999999999999986678999999985
No 196
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.56 E-value=4.8e-07 Score=89.92 Aligned_cols=66 Identities=14% Similarity=0.285 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcC-C--Cc--EEEcCEEEEcCCcChH-HH--HHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTK-Q--GD--HLESSYALVCAGLQAD-EM--ALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~-~--g~--~i~ad~VV~aaG~~s~-~l--~~~~g~~~ 271 (473)
+.+.+.+.+++.|++++++++|+++..+++++.|++. + |. ++.+|.||+|+|.... .+ ++.+|+..
T Consensus 212 ~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~ 285 (464)
T 2eq6_A 212 TAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKV 285 (464)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCB
T ss_pred HHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCcee
Confidence 3444677788899999999999999987777776654 5 65 7999999999998742 22 45666553
No 197
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.56 E-value=2.4e-07 Score=92.61 Aligned_cols=66 Identities=17% Similarity=0.197 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCC----CcEEEcCEEEEcCCcCh-HHH--HHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQ----GDHLESSYALVCAGLQA-DEM--ALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~----g~~i~ad~VV~aaG~~s-~~l--~~~~g~~~ 271 (473)
+.+.+.+.+++.|++++++++|+++..+++++.|++.+ |.++.+|.||+|+|... ..+ ++.+|++.
T Consensus 228 ~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~ 300 (482)
T 1ojt_A 228 LVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAV 300 (482)
T ss_dssp HHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCC
T ss_pred HHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCcee
Confidence 34456777888999999999999999877776666654 66789999999999874 334 56677654
No 198
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.56 E-value=3.7e-07 Score=91.45 Aligned_cols=67 Identities=21% Similarity=0.282 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh-HHHHHhcCCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA-DEMALKSGCSLE 272 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s-~~l~~~~g~~~~ 272 (473)
+...+.+.++++|++++++++|+++..+++.+.|++.+|.++.||.||+|+|... ..+++.+|++.+
T Consensus 228 ~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~ 295 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEID 295 (493)
T ss_dssp HHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBC
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCCccc
Confidence 4445677788899999999999999877777788888888999999999999984 457788887643
No 199
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.56 E-value=1e-07 Score=93.24 Aligned_cols=44 Identities=18% Similarity=0.302 Sum_probs=36.2
Q ss_pred HHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcC
Q psy7710 214 FCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 214 ~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
+++.|++++++++|+.+..+.. .|.+.+|.++.+|++|+|+|..
T Consensus 67 ~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 67 YGEARIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp HHHTTCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 3467999999999999987655 4556677789999999999975
No 200
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.56 E-value=2e-07 Score=93.11 Aligned_cols=65 Identities=25% Similarity=0.282 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEE--cCCeEEEEcC-----CCcEEEcCEEEEcCCcChH-H--HHHhcCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKE--NPESVTISTK-----QGDHLESSYALVCAGLQAD-E--MALKSGCS 270 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~--~~~~v~v~~~-----~g~~i~ad~VV~aaG~~s~-~--l~~~~g~~ 270 (473)
+...+.+.+++.|++++++++|+++.. +++.+.|++. ++.++.+|.||+|+|...+ . +++.+|+.
T Consensus 226 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~ 300 (478)
T 1v59_A 226 VAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLE 300 (478)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCce
Confidence 444567778889999999999999987 5666666543 3457999999999998743 2 45555554
No 201
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.55 E-value=3.9e-07 Score=91.48 Aligned_cols=36 Identities=47% Similarity=0.822 Sum_probs=33.0
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCccc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELG 95 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g 95 (473)
++||+|||||++|+++|..|++. |.+|+|||++ .+|
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~--g~~V~liE~~-~~G 37 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH--NAKVALVEKS-RLG 37 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEEESS-STT
T ss_pred ccCEEEECCCHHHHHHHHHHHHC--CCcEEEEeCC-CcC
Confidence 48999999999999999999999 9999999998 444
No 202
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.55 E-value=1.6e-07 Score=91.68 Aligned_cols=45 Identities=13% Similarity=0.187 Sum_probs=35.7
Q ss_pred HHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcC
Q psy7710 212 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 212 ~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
+.+.+.|++++. ++|+++..++.. |.+.+|..+.+|.+|+|+|..
T Consensus 65 ~~~~~~~i~~~~-~~v~~id~~~~~--v~~~~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 65 KFFQDQAIELIS-DRMVSIDREGRK--LLLASGTAIEYGHLVLATGAR 109 (404)
T ss_dssp HHHHHTTEEEEC-CCEEEEETTTTE--EEESSSCEEECSEEEECCCEE
T ss_pred HHHHhCCCEEEE-EEEEEEECCCCE--EEECCCCEEECCEEEEeeCCC
Confidence 334567999998 999999876654 556677789999999999974
No 203
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.55 E-value=2.4e-07 Score=92.01 Aligned_cols=65 Identities=17% Similarity=0.334 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcC---CCcEEEcCEEEEcCCcChH-HH--HHhcCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTK---QGDHLESSYALVCAGLQAD-EM--ALKSGCS 270 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~---~g~~i~ad~VV~aaG~~s~-~l--~~~~g~~ 270 (473)
+...+.+.+++.|++++++++|+++..+++++.+++. ++.++++|.||+|+|...+ .+ ++.+|+.
T Consensus 213 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~ 283 (455)
T 1ebd_A 213 MAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIK 283 (455)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCc
Confidence 3444667778899999999999999987766666543 4457999999999998742 33 3444543
No 204
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.54 E-value=7.9e-07 Score=88.38 Aligned_cols=36 Identities=31% Similarity=0.455 Sum_probs=33.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCccc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELG 95 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g 95 (473)
++||+|||||++|+++|..|++. |.+|+|||+++ +|
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~--g~~V~lie~~~-~G 41 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL--GLKVLAVEAGE-VG 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC-TT
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCC-CC
Confidence 58999999999999999999999 89999999984 54
No 205
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.54 E-value=1.1e-06 Score=87.11 Aligned_cols=38 Identities=26% Similarity=0.335 Sum_probs=34.1
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGM 96 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~ 96 (473)
.++||+|||||++|+++|.+|++. |.+|+|||++ .+|+
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~--g~~V~lie~~-~~GG 41 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQL--GIPTVLVEGQ-ALGG 41 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH--TCCEEEECSS-CTTH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCEEEEEccC-CCCC
Confidence 468999999999999999999999 8999999995 5653
No 206
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.54 E-value=3.1e-07 Score=91.77 Aligned_cols=65 Identities=20% Similarity=0.272 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh-HHHHHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA-DEMALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s-~~l~~~~g~~~ 271 (473)
+.+.+.+.+++.|++++++++|+++..+++...+.++++ ++++|.||+|+|... ..+++.+|++.
T Consensus 229 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~-~i~~D~vi~a~G~~p~~~~l~~~g~~~ 294 (480)
T 3cgb_A 229 MAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKG-TYKADLVLVSVGVKPNTDFLEGTNIRT 294 (480)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTE-EEECSEEEECSCEEESCGGGTTSCCCB
T ss_pred HHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCC-EEEcCEEEECcCCCcChHHHHhCCccc
Confidence 444577778889999999999999987654445666655 899999999999884 35666666553
No 207
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.52 E-value=2.4e-07 Score=89.73 Aligned_cols=36 Identities=19% Similarity=0.351 Sum_probs=31.0
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.++||+|||||++|+++|..|++.++..+|+|+|++
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~ 38 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITAD 38 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSS
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECC
Confidence 358999999999999999999999433679999987
No 208
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.52 E-value=8.7e-07 Score=86.35 Aligned_cols=59 Identities=14% Similarity=0.094 Sum_probs=50.6
Q ss_pred HHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhcCCC
Q psy7710 212 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKSGCS 270 (473)
Q Consensus 212 ~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~g~~ 270 (473)
+.+++.|+++++++++..+..+++...+++.+|+++++|.||+|+|...+.+++.+|+.
T Consensus 210 ~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl~ 268 (401)
T 3vrd_B 210 FGTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGKIAQSASLT 268 (401)
T ss_dssp TTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEEECHHHHHTTCC
T ss_pred HHHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcCCchhHhhcccc
Confidence 34467899999999999998887777788999989999999999998877888888764
No 209
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.52 E-value=4.2e-07 Score=93.34 Aligned_cols=55 Identities=15% Similarity=0.129 Sum_probs=41.8
Q ss_pred cCcEEEeCceEEEEEEcCC--e---EEEEc-CCC--cEEEcCEEEEcCCcC-hHHHHHhcCCCC
Q psy7710 217 LGGEIRLNQQVESFKENPE--S---VTIST-KQG--DHLESSYALVCAGLQ-ADEMALKSGCSL 271 (473)
Q Consensus 217 ~Gv~i~~~~~V~~i~~~~~--~---v~v~~-~~g--~~i~ad~VV~aaG~~-s~~l~~~~g~~~ 271 (473)
.|++|++++.|++|..+++ . |.+.. .+| .+++||.||+|+|.. +.+++...|+..
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~ 336 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQ 336 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSC
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCc
Confidence 4899999999999998642 2 33332 345 367899999999998 778888887753
No 210
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.51 E-value=5.3e-07 Score=89.79 Aligned_cols=66 Identities=17% Similarity=0.136 Sum_probs=49.1
Q ss_pred HHHHHHHHH-HHcCcEEEeCceEEEEEEcCCeEEEEcC--CC--cEEEcCEEEEcCCcCh-HHH--HHhcCCCC
Q psy7710 206 VTRVMGEEF-CELGGEIRLNQQVESFKENPESVTISTK--QG--DHLESSYALVCAGLQA-DEM--ALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~-~~~Gv~i~~~~~V~~i~~~~~~v~v~~~--~g--~~i~ad~VV~aaG~~s-~~l--~~~~g~~~ 271 (473)
+.+.+.+.+ ++.|++++++++|+++..+++++.+++. +| .++++|.||+|+|... ..+ ++.+|++.
T Consensus 217 ~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~ 290 (468)
T 2qae_A 217 VTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAK 290 (468)
T ss_dssp HHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCB
T ss_pred HHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCcc
Confidence 344577778 8899999999999999987766666543 55 5799999999999884 344 56667654
No 211
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.50 E-value=8e-08 Score=94.66 Aligned_cols=37 Identities=41% Similarity=0.652 Sum_probs=32.3
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
.||+|||||++|+++|++|++.++|.+|+|||+++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 5899999999999999999993338999999998543
No 212
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.50 E-value=2.1e-07 Score=93.25 Aligned_cols=54 Identities=9% Similarity=0.127 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEc-CCCc--EEEcCEEEEcCCcCh
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTIST-KQGD--HLESSYALVCAGLQA 260 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~--~i~ad~VV~aaG~~s 260 (473)
+...+.+.+ +.|+++++++.|.++..+++.+.+.+ .++. .+.+|++|+|+|...
T Consensus 163 ~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 163 VVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp HHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred HHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 334444444 56899999999999988777665543 3442 689999999999753
No 213
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.50 E-value=5.6e-07 Score=90.34 Aligned_cols=65 Identities=17% Similarity=0.202 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcC-CeEEEEcCCCcE-EEcCEEEEcCCcChHH--H-HHhcCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENP-ESVTISTKQGDH-LESSYALVCAGLQADE--M-ALKSGCS 270 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~-~~v~v~~~~g~~-i~ad~VV~aaG~~s~~--l-~~~~g~~ 270 (473)
+...+.+.++++|++++++++|+++..++ +.+.|++.+|.+ +.+|.||+|+|...+. | ++.+|++
T Consensus 219 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~ 288 (500)
T 1onf_A 219 VINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVE 288 (500)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCC
T ss_pred hHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCcc
Confidence 34457777888999999999999998765 347788888866 9999999999987432 4 4555554
No 214
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.49 E-value=5.7e-07 Score=89.46 Aligned_cols=66 Identities=27% Similarity=0.401 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcC-CC--cEEEcCEEEEcCCcCh-HHH--HHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTK-QG--DHLESSYALVCAGLQA-DEM--ALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~-~g--~~i~ad~VV~aaG~~s-~~l--~~~~g~~~ 271 (473)
+...+.+.++++|++++++++|+++..+++++.+++. +| .++.+|.||+|+|... ..+ ++.+|+..
T Consensus 214 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~ 285 (464)
T 2a8x_A 214 VSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVAL 285 (464)
T ss_dssp HHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCB
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCcc
Confidence 3344667778889999999999999887766666643 45 5799999999999874 233 56666653
No 215
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.48 E-value=1.5e-07 Score=94.19 Aligned_cols=40 Identities=25% Similarity=0.517 Sum_probs=35.2
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCccc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELG 95 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g 95 (473)
..+||+|||||++|+++|..|++++++.+|+|||+.+.++
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 5689999999999999999998876789999999986443
No 216
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.46 E-value=5e-07 Score=83.99 Aligned_cols=57 Identities=11% Similarity=0.188 Sum_probs=43.9
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcC-hHHHHHhcCCC
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ-ADEMALKSGCS 270 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~-s~~l~~~~g~~ 270 (473)
+.+.+++.|++++. ++|+++..++ .|.+.+|.++.+|.||+|+|.. ...+++.+|++
T Consensus 180 ~~~~l~~~gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~ 237 (297)
T 3fbs_A 180 QHALLAARGVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPKLRITVDWIEKLGCA 237 (297)
T ss_dssp HHHHHHHTTCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCEEECCCSCHHHHTCC
T ss_pred HHHHHHHCCcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccCcccCchhHHhcCCc
Confidence 45566788999985 8999887543 5677788889999999999986 34567777654
No 217
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.45 E-value=2.7e-07 Score=90.16 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=35.4
Q ss_pred HHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 215 CELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 215 ~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
++.|++++++++|+.+..++. .|++.+|.++++|++|+|+|...
T Consensus 70 ~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 70 RAPEVEWLLGVTAQSFDPQAH--TVALSDGRTLPYGTLVLATGAAP 113 (408)
T ss_dssp TSCSCEEEETCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred HHCCCEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCC
Confidence 456899999999999986654 35556677899999999999854
No 218
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.43 E-value=9e-08 Score=94.60 Aligned_cols=38 Identities=26% Similarity=0.459 Sum_probs=34.2
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCccc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELG 95 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g 95 (473)
..+||+|||||++|+++|+.|+++ |.+|+|+|+.+.+|
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~--G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK--GYEVHVYDRYDRMG 158 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH--TCCEEEECSSSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCCCC
Confidence 457999999999999999999999 89999999986544
No 219
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.43 E-value=8.9e-07 Score=85.10 Aligned_cols=61 Identities=20% Similarity=0.300 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh-HHHHHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA-DEMALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s-~~l~~~~g~~~ 271 (473)
+.+.+.+.++++|++++++++|+++. .+ .|++.+|. +++|.||+|+|... ..+++.+|++.
T Consensus 185 ~~~~l~~~l~~~gV~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~ 246 (367)
T 1xhc_A 185 LSNMIKDMLEETGVKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGIVPNVDLARRSGIHT 246 (367)
T ss_dssp HHHHHHHHHHHTTEEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCEEECCHHHHHTTCCB
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCCCcCHHHHHhCCCCC
Confidence 34456777888999999999999987 22 35667775 99999999999874 35888888764
No 220
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.42 E-value=1.2e-06 Score=86.60 Aligned_cols=54 Identities=19% Similarity=0.307 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.+.+.+.+++.|++++++++|+++..++..+.+.+++ .++++|.||+|+|...
T Consensus 193 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~~-~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 193 FTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDK-NAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEESS-CEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEECC-CEEECCEEEECcCCCC
Confidence 44557777888999999999999998764333466644 5899999999999874
No 221
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.42 E-value=1.1e-06 Score=82.15 Aligned_cols=61 Identities=10% Similarity=0.246 Sum_probs=44.4
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEcCCeE-EEEcCCCcEEEcCEEEEcCCcC-hHHHHHhcCCCC
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKENPESV-TISTKQGDHLESSYALVCAGLQ-ADEMALKSGCSL 271 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~g~~i~ad~VV~aaG~~-s~~l~~~~g~~~ 271 (473)
+.+.+++.|+.++.++ +..+..+++.+ .|++.+|.++.+|.+|+++|.. ...++..+|++.
T Consensus 186 ~~~~l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~ 248 (304)
T 4fk1_A 186 IMDELSNKNIPVITES-IRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCEL 248 (304)
T ss_dssp HHHHHHTTTCCEECSC-EEEEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCC
T ss_pred hhhhhhccceeEeeee-EEEeecCCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEE
Confidence 4455667788888664 66676555443 4888888889999999988876 446778888765
No 222
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.40 E-value=4.9e-07 Score=90.14 Aligned_cols=65 Identities=18% Similarity=0.269 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcC---CC--cEEEcCEEEEcCCcChH-HH--HHhcCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTK---QG--DHLESSYALVCAGLQAD-EM--ALKSGCS 270 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~---~g--~~i~ad~VV~aaG~~s~-~l--~~~~g~~ 270 (473)
+.+.+.+.+++.|++++++++|+++..+++++.+++. +| .++.+|.||+|+|...+ .+ ++.+|+.
T Consensus 220 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~ 292 (470)
T 1dxl_A 220 IRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVE 292 (470)
T ss_dssp HHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCC
T ss_pred HHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCc
Confidence 3445677788899999999999999877655655532 33 57999999999998743 33 4445544
No 223
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.39 E-value=2.9e-06 Score=84.04 Aligned_cols=59 Identities=20% Similarity=0.489 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEE-EEcCCCcEEEcCEEEEcCCcCh-HHHHH
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVT-ISTKQGDHLESSYALVCAGLQA-DEMAL 265 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~-v~~~~g~~i~ad~VV~aaG~~s-~~l~~ 265 (473)
+...+.+.+++.|++++++++|+++..+++++. +.+ +|.++++|.||+|+|... ..+++
T Consensus 193 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~~ll~ 253 (452)
T 2cdu_A 193 FTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPNTELLK 253 (452)
T ss_dssp HHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEECCGGGT
T ss_pred HHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCCHHHHH
Confidence 445577778889999999999999987566664 555 566899999999999873 23443
No 224
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.38 E-value=1e-06 Score=95.15 Aligned_cols=37 Identities=38% Similarity=0.592 Sum_probs=34.1
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCccc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELG 95 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g 95 (473)
.+||+|||||++|+++|..|++. |.+|+|||+++.+|
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~--G~~V~lie~~~~~G 164 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRS--GARVMLLDERAEAG 164 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--CCcEEEEeCCCCCC
Confidence 47999999999999999999999 89999999986665
No 225
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.38 E-value=1.2e-06 Score=86.94 Aligned_cols=62 Identities=21% Similarity=0.243 Sum_probs=45.3
Q ss_pred HHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCC--cEEEcCEEEEcCCcChH-HH--HHhcCCC
Q psy7710 207 TRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQAD-EM--ALKSGCS 270 (473)
Q Consensus 207 ~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~ad~VV~aaG~~s~-~l--~~~~g~~ 270 (473)
...+.+.+++.|++++++++|+++.. ++ +.+++.+| .++.+|.||+|+|...+ .+ ++.+|+.
T Consensus 215 ~~~l~~~l~~~gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~ 281 (458)
T 1lvl_A 215 TAPVAESLKKLGIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLK 281 (458)
T ss_dssp HHHHHHHHHHHTCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCC
T ss_pred HHHHHHHHHHCCCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCc
Confidence 34466677888999999999999986 43 66665455 58999999999998743 22 3555543
No 226
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.37 E-value=2.6e-07 Score=87.34 Aligned_cols=43 Identities=33% Similarity=0.608 Sum_probs=37.0
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQ 98 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~ 98 (473)
.++||+|||||++|+++|++|+++..|++|+|||+++.+|+..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~ 106 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceE
Confidence 4689999999999999999998644489999999987777654
No 227
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.36 E-value=2.1e-06 Score=84.52 Aligned_cols=47 Identities=9% Similarity=0.154 Sum_probs=37.0
Q ss_pred HHHcCcEEEeCceEEEEEEcCCeEEEEcC---CCcEEEcCEEEEcCCcCh
Q psy7710 214 FCELGGEIRLNQQVESFKENPESVTISTK---QGDHLESSYALVCAGLQA 260 (473)
Q Consensus 214 ~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~---~g~~i~ad~VV~aaG~~s 260 (473)
+++.|++++.+++|+.|+.+...+.+... ++.++.+|++|+|||...
T Consensus 67 ~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 67 YDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASA 116 (437)
T ss_dssp HHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEE
T ss_pred HHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcc
Confidence 34579999999999999888777766543 234688999999999864
No 228
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.34 E-value=7.8e-07 Score=89.18 Aligned_cols=55 Identities=7% Similarity=0.010 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcC--------CeEEEEcCCC-----cEEEcCEEEEcCCc
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENP--------ESVTISTKQG-----DHLESSYALVCAGL 258 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~--------~~v~v~~~~g-----~~i~ad~VV~aaG~ 258 (473)
..+.+.|...+++.+..|+++++|+++...+ +.|.|++.++ .++.|+.||+|+|.
T Consensus 145 ~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 145 LEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 4566666666777777899999999998643 2477776443 36889999999995
No 229
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.31 E-value=3.4e-06 Score=84.45 Aligned_cols=54 Identities=17% Similarity=0.324 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA 260 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s 260 (473)
+.+.+.+.+++.|++++++++|+++..++....|.+ +|.++++|.||+|+|...
T Consensus 238 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 238 LTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 444577778889999999999999986433223555 456899999999999873
No 230
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.27 E-value=1.3e-05 Score=82.34 Aligned_cols=34 Identities=29% Similarity=0.482 Sum_probs=32.0
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..+||+|||||++|+++|..|++. |.+|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~--g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKY--GAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHT--TCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhC--CCeEEEEecc
Confidence 568999999999999999999999 9999999984
No 231
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.26 E-value=1.1e-05 Score=75.52 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=30.5
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.+|+|||+|.+|+-+|..|++. |.+|+|+++..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~--G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY--GSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT--SSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHh--CCeeeeecccc
Confidence 4799999999999999999999 99999999863
No 232
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.26 E-value=9.9e-07 Score=88.30 Aligned_cols=35 Identities=11% Similarity=0.339 Sum_probs=32.1
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.+.+|||||||.+|+++|..|++. +.+|+|||+++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~--~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTK--KYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTT--TCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhC--CCcEEEECCCC
Confidence 456899999999999999999988 89999999974
No 233
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.20 E-value=7e-06 Score=77.68 Aligned_cols=61 Identities=13% Similarity=-0.011 Sum_probs=44.8
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcC---CC--cEEEcCEEEEcCCcChH-HHHHhcCCC
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKENPESVTISTK---QG--DHLESSYALVCAGLQAD-EMALKSGCS 270 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~---~g--~~i~ad~VV~aaG~~s~-~l~~~~g~~ 270 (473)
+.+.+++.|+++++++.|.++..+++...|++. +| .++.+|.||+|+|.... .+++.+|++
T Consensus 197 l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~ 263 (335)
T 2zbw_A 197 LMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLA 263 (335)
T ss_dssp HHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCC
T ss_pred HHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhccee
Confidence 556677789999999999999886543234432 55 57899999999998743 466666654
No 234
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.19 E-value=1.3e-06 Score=83.44 Aligned_cols=42 Identities=19% Similarity=0.376 Sum_probs=38.2
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc-CcccCccc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE-KELGMHQT 99 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~-~~~g~~~s 99 (473)
..+||+|||||++|+++|+.|+++ |.+|+|+|+. +.+||...
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~--G~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA--GHDVTILEANANRVGGRIK 85 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT--SCEEEEECSCSSCCBTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC--CCcEEEEeccccccCCcee
Confidence 568999999999999999999999 8999999998 88887654
No 235
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.18 E-value=2.7e-05 Score=77.29 Aligned_cols=45 Identities=11% Similarity=0.213 Sum_probs=37.5
Q ss_pred cCcEEEeCceEEEEEEcCCeEEEEcC---CCc--EEEcCEEEEcCCcChH
Q psy7710 217 LGGEIRLNQQVESFKENPESVTISTK---QGD--HLESSYALVCAGLQAD 261 (473)
Q Consensus 217 ~Gv~i~~~~~V~~i~~~~~~v~v~~~---~g~--~i~ad~VV~aaG~~s~ 261 (473)
.|+++++++.|+++..+++++.|++. +|+ ++.+|.||+|+|....
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCC
Confidence 69999999999999988888776654 553 4899999999998743
No 236
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.17 E-value=1.5e-06 Score=83.66 Aligned_cols=43 Identities=21% Similarity=0.436 Sum_probs=39.1
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTG 100 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~ 100 (473)
..+||+|||||++|+++|++|+++ |.+|+|+|+.+.+||.+..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~--g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASS--GQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSSGGGCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHC--CCceEEEeccCCCCCccce
Confidence 578999999999999999999999 9999999999888877654
No 237
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.15 E-value=1e-05 Score=80.82 Aligned_cols=66 Identities=11% Similarity=0.073 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCC-eEEEEcCCC-----cEEEcCEEEEcCCcCh-HHHH--HhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPE-SVTISTKQG-----DHLESSYALVCAGLQA-DEMA--LKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~-~v~v~~~~g-----~~i~ad~VV~aaG~~s-~~l~--~~~g~~~ 271 (473)
+.+.+.+.+++.|++++++++|.++..+++ .+.|++.++ .++.+|.||+|+|... ..++ +.+|+..
T Consensus 229 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~ 303 (483)
T 3dgh_A 229 MAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTV 303 (483)
T ss_dssp HHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCC
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccc
Confidence 445577778889999999999999987543 455554433 2789999999999863 2333 5556553
No 238
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.14 E-value=1.9e-05 Score=74.06 Aligned_cols=52 Identities=12% Similarity=0.148 Sum_probs=39.4
Q ss_pred HHHHHHHHcCcEEEeCceEEEEEEcCCeE-EEEcCC----C--cEEEcCEEEEcCCcCh
Q psy7710 209 VMGEEFCELGGEIRLNQQVESFKENPESV-TISTKQ----G--DHLESSYALVCAGLQA 260 (473)
Q Consensus 209 ~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~----g--~~i~ad~VV~aaG~~s 260 (473)
.+.+.+++.|++++++++|+++..+++++ .|++.+ | .++++|.||+|+|...
T Consensus 189 ~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 189 RLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 45666778899999999999998876443 243322 3 5799999999999874
No 239
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.10 E-value=1.9e-06 Score=82.72 Aligned_cols=42 Identities=33% Similarity=0.607 Sum_probs=37.7
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTG 100 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~ 100 (473)
++||+|||||++|+++|++|+++ |.+|+|+|+++.+||.+..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~--g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKL--NKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG--TCCEEEECSSSSSSGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHhC--CCcEEEEecCCCCCcceEe
Confidence 36899999999999999999999 8999999998888877544
No 240
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.10 E-value=1.3e-05 Score=76.81 Aligned_cols=61 Identities=13% Similarity=0.177 Sum_probs=44.5
Q ss_pred HHHHHHHcCcEEEeCceEEEEEEcCCeE---EEEcCCC--cEEEcCEEEEcCCcChH-HHHHhcCCC
Q psy7710 210 MGEEFCELGGEIRLNQQVESFKENPESV---TISTKQG--DHLESSYALVCAGLQAD-EMALKSGCS 270 (473)
Q Consensus 210 l~~~~~~~Gv~i~~~~~V~~i~~~~~~v---~v~~~~g--~~i~ad~VV~aaG~~s~-~l~~~~g~~ 270 (473)
+.+.+++.|++++++++|+++..+++++ .+.+.+| ..+++|.||+|+|...+ .+++.+|++
T Consensus 208 l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~ 274 (360)
T 3ab1_A 208 VERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLE 274 (360)
T ss_dssp SHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCC
T ss_pred HHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccc
Confidence 4445667899999999999999876543 3433466 57899999999997743 466666554
No 241
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.10 E-value=2.4e-06 Score=83.10 Aligned_cols=44 Identities=23% Similarity=0.491 Sum_probs=38.9
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTG 100 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~ 100 (473)
.++||+|||||++|+++|++|+++. |.+|+|+|+++.+||.+..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~-g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQL-DKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHS-CCCEEEECSSSSSSGGGCE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhC-CCCEEEEeCCCCCCCeeee
Confidence 4689999999999999999999872 6899999999889887654
No 242
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.10 E-value=1.6e-05 Score=76.24 Aligned_cols=60 Identities=15% Similarity=0.223 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcC-cEEEeCceEEEEEEcCCeEEEEcCCCcEEE-cCEEEEcCCcChHH-HHH
Q psy7710 206 VTRVMGEEFCELG-GEIRLNQQVESFKENPESVTISTKQGDHLE-SSYALVCAGLQADE-MAL 265 (473)
Q Consensus 206 ~~~~l~~~~~~~G-v~i~~~~~V~~i~~~~~~v~v~~~~g~~i~-ad~VV~aaG~~s~~-l~~ 265 (473)
+.+.+.+.+++.| ++++++++|.++..+++.+.|++.+|..+. +|.||+|+|..... ++.
T Consensus 216 ~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~ 278 (369)
T 3d1c_A 216 TRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIV 278 (369)
T ss_dssp HHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGGGSHHH
T ss_pred HHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCccchhh
Confidence 4455667777887 999999999999876777778888886665 59999999987433 443
No 243
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.08 E-value=1.2e-05 Score=80.54 Aligned_cols=57 Identities=11% Similarity=0.137 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCC----cEEEcCEEEEcCCcChH
Q psy7710 205 LVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQG----DHLESSYALVCAGLQAD 261 (473)
Q Consensus 205 ~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g----~~i~ad~VV~aaG~~s~ 261 (473)
.+.+.+.+.++++||+|+++++|++++.++....+.+.+| +++.||.||+|+|...+
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCC
Confidence 3556677888999999999999999864433334555665 36899999999997643
No 244
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.06 E-value=2.2e-05 Score=73.64 Aligned_cols=56 Identities=18% Similarity=0.275 Sum_probs=43.4
Q ss_pred HcCcEEEeCceEEEEEEcCCeEEEEcCC---Cc--EEEcCEEEEcCCcCh-HHHHHhcCCCC
Q psy7710 216 ELGGEIRLNQQVESFKENPESVTISTKQ---GD--HLESSYALVCAGLQA-DEMALKSGCSL 271 (473)
Q Consensus 216 ~~Gv~i~~~~~V~~i~~~~~~v~v~~~~---g~--~i~ad~VV~aaG~~s-~~l~~~~g~~~ 271 (473)
+.|++++++++|+++..+++...|++.+ |+ ++.+|.||+|+|... ..+++.+|+..
T Consensus 202 ~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~ 263 (323)
T 3f8d_A 202 KPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIET 263 (323)
T ss_dssp CTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCB
T ss_pred CCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeee
Confidence 4599999999999999876544454433 54 789999999999884 47888887654
No 245
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.06 E-value=2.9e-06 Score=85.34 Aligned_cols=43 Identities=28% Similarity=0.487 Sum_probs=38.2
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTG 100 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~ 100 (473)
..+||+|||||++||++|+.|+++ |.+|+|+|+.+.+||....
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~--g~~v~v~E~~~~~GG~~~~ 54 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIH--GLNVTVFEAEGKAGGKLRS 54 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTT--SCEEEEECSSSSSCSSCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCcEEEEEeCCCCCCceee
Confidence 458999999999999999999999 9999999999888876543
No 246
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.05 E-value=1.2e-05 Score=75.53 Aligned_cols=59 Identities=19% Similarity=0.254 Sum_probs=41.6
Q ss_pred HHHHHcCcEEEeCceEEEEEEcCC---eEEEEc-CCCc--EEEcCEEEEcCCcCh-HHHHHhcCCC
Q psy7710 212 EEFCELGGEIRLNQQVESFKENPE---SVTIST-KQGD--HLESSYALVCAGLQA-DEMALKSGCS 270 (473)
Q Consensus 212 ~~~~~~Gv~i~~~~~V~~i~~~~~---~v~v~~-~~g~--~i~ad~VV~aaG~~s-~~l~~~~g~~ 270 (473)
+.+++.|++++++++|+++..+++ ++.+.. .+|. ++.+|.||+|+|... ..+++.+|+.
T Consensus 198 ~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~ 263 (319)
T 3cty_A 198 QEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVK 263 (319)
T ss_dssp HHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCC
T ss_pred HHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhcccc
Confidence 344568999999999999988765 233332 2553 689999999999874 3566555543
No 247
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.05 E-value=1.4e-06 Score=94.80 Aligned_cols=37 Identities=22% Similarity=0.326 Sum_probs=33.3
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEeccCccc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKEKELG 95 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~~~~g 95 (473)
.+||+|||||++|+++|++|+++ |. +|+|+|+.+.+|
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~--G~~~Vtv~E~~~~~G 224 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL--GYSDITIFEKQEYVG 224 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSSCS
T ss_pred CCEEEEECccHHHHHHHHHHHhc--CCCcEEEEeCCCCCC
Confidence 57999999999999999999999 88 799999985554
No 248
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.02 E-value=3.7e-05 Score=76.82 Aligned_cols=66 Identities=14% Similarity=0.111 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEc-CCeEEEEcC---CCc--EEEcCEEEEcCCcCh-HHH--HHhcCCCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKEN-PESVTISTK---QGD--HLESSYALVCAGLQA-DEM--ALKSGCSL 271 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~-~~~v~v~~~---~g~--~i~ad~VV~aaG~~s-~~l--~~~~g~~~ 271 (473)
+.+.+.+.+++.|+++++++.|.++... ++.+.|+.. +|+ ++.+|.||+|+|... ..+ +..+|+..
T Consensus 227 ~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~ 301 (488)
T 3dgz_A 227 MSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGIST 301 (488)
T ss_dssp HHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCB
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEe
Confidence 4455777788899999999999999874 444555432 253 478999999999863 233 44556543
No 249
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.99 E-value=1.7e-05 Score=78.70 Aligned_cols=53 Identities=19% Similarity=0.248 Sum_probs=41.3
Q ss_pred cEEEeCceEEEEEEcC-CeEEEEcC--CCc--EEEcCEEEEcCCcChH-HH-HHhcCCCC
Q psy7710 219 GEIRLNQQVESFKENP-ESVTISTK--QGD--HLESSYALVCAGLQAD-EM-ALKSGCSL 271 (473)
Q Consensus 219 v~i~~~~~V~~i~~~~-~~v~v~~~--~g~--~i~ad~VV~aaG~~s~-~l-~~~~g~~~ 271 (473)
++++++++|+++..++ +++.|.+. +|. ++++|.||+|+|...+ .| ++.+|++.
T Consensus 226 v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~ 285 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSI 285 (466)
T ss_dssp CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCB
T ss_pred EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCcee
Confidence 9999999999998876 77777766 564 7999999999998732 24 56666654
No 250
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.95 E-value=6.3e-06 Score=79.60 Aligned_cols=42 Identities=17% Similarity=0.429 Sum_probs=37.7
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQTG 100 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s~ 100 (473)
++||+|||||++|+++|+.|+++ |.+|+|+|+++.+||.+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~--g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK--GHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSSSGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHC--CCcEEEEEecCCcCCcccc
Confidence 47999999999999999999999 8999999999888876543
No 251
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.95 E-value=0.0002 Score=74.38 Aligned_cols=49 Identities=12% Similarity=0.279 Sum_probs=38.6
Q ss_pred HHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCC--cEEEcCEEEEcCCcCh
Q psy7710 209 VMGEEFCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQA 260 (473)
Q Consensus 209 ~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~ad~VV~aaG~~s 260 (473)
.+.+.+++.|++++++++|+++. ++++.++ .+| .++.+|.||+|+|...
T Consensus 578 ~~~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 578 IHRTTLLSRGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCccc
Confidence 35667788999999999999987 3455554 455 5789999999999874
No 252
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.90 E-value=4.1e-05 Score=72.33 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=30.4
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|+|||+|.+|+.+|..|++. |.+|+++++.+
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~--g~~v~~v~~~~ 206 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKY--GSKVFMLVRKD 206 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT--SSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCEEEEEEcCC
Confidence 4699999999999999999999 89999999874
No 253
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.86 E-value=7.9e-05 Score=70.05 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=29.9
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
+|+|||+|.+|+.+|..|++. |.+|+++++.+
T Consensus 154 ~v~VvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~ 185 (325)
T 2q7v_A 154 KVVVIGGGDAAVEEGMFLTKF--ADEVTVIHRRD 185 (325)
T ss_dssp EEEEECCSHHHHHHHHHHTTT--CSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhc--CCEEEEEeCCC
Confidence 699999999999999999999 89999999874
No 254
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.86 E-value=0.00013 Score=73.48 Aligned_cols=55 Identities=13% Similarity=0.108 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcC----CeEEE--EcCCC---cEEEcCEEEEcCCcCh
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENP----ESVTI--STKQG---DHLESSYALVCAGLQA 260 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~----~~v~v--~~~~g---~~i~ad~VV~aaG~~s 260 (473)
+.+.+.+.+++.|+++++++.++++...+ +.+.+ ...+| .++.+|.||+|+|...
T Consensus 252 ~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 252 MANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcc
Confidence 44456777888999999999988887532 34443 33444 2568999999999863
No 255
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.85 E-value=8e-05 Score=69.48 Aligned_cols=33 Identities=30% Similarity=0.374 Sum_probs=30.4
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|+|||+|.+|+.+|..|++. |.+|+++++.+
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~ 176 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANI--CKKVYLIHRRD 176 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT--SSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCEEEEEeeCC
Confidence 4799999999999999999999 89999999874
No 256
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.85 E-value=2.8e-05 Score=73.25 Aligned_cols=57 Identities=9% Similarity=-0.036 Sum_probs=41.9
Q ss_pred HHHcCcEEEeCceEEEEEEcCCeEEEEcCC-----CcEEEcCEEEEcCCcCh-HHHHHhcCCC
Q psy7710 214 FCELGGEIRLNQQVESFKENPESVTISTKQ-----GDHLESSYALVCAGLQA-DEMALKSGCS 270 (473)
Q Consensus 214 ~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~-----g~~i~ad~VV~aaG~~s-~~l~~~~g~~ 270 (473)
+++.|++++++++|.++..+++...|.+.+ +.++.+|.||+|+|... ..+++.+|+.
T Consensus 199 l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~ 261 (332)
T 3lzw_A 199 LHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLD 261 (332)
T ss_dssp HHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCC
T ss_pred HhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCcc
Confidence 567899999999999998766543343322 35789999999999874 4566666554
No 257
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.83 E-value=9.3e-06 Score=79.77 Aligned_cols=35 Identities=17% Similarity=0.299 Sum_probs=31.6
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.++||+|||||++|+++|+.|+++ |.+|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~--G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQH--DVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHT--TCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC--CCeEEEEcCCC
Confidence 347999999999999999999999 99999999974
No 258
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.83 E-value=4e-05 Score=71.66 Aligned_cols=34 Identities=26% Similarity=0.357 Sum_probs=31.2
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKE 93 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~ 93 (473)
.+|+|||||.+|+-+|..|++. |.+|+|+|+.+.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~--g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKF--ADKVTIVHRRDE 179 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--CSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCEEEEEecccc
Confidence 3799999999999999999999 999999999854
No 259
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.82 E-value=7.3e-05 Score=69.72 Aligned_cols=33 Identities=33% Similarity=0.388 Sum_probs=30.2
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.+|+|||+|.+|+.+|..|++. +.+|+++++.+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~--g~~Vtlv~~~~ 177 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGI--VEHVTLLEFAP 177 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--BSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHh--CCEEEEEEeCc
Confidence 3699999999999999999998 89999999874
No 260
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.79 E-value=0.00049 Score=69.35 Aligned_cols=52 Identities=13% Similarity=0.095 Sum_probs=39.2
Q ss_pred HHHHHHHcCcEEEe--CceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHH-HHH
Q psy7710 210 MGEEFCELGGEIRL--NQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADE-MAL 265 (473)
Q Consensus 210 l~~~~~~~Gv~i~~--~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~-l~~ 265 (473)
+.+.+.+.+|+++. .+.|++|..++ |.+.+|+.+++|.||+|||..+.. .+.
T Consensus 336 y~~~l~~~nV~lv~~~~~~I~~it~~g----v~~~dG~~~~~DvIV~ATGf~~~~~~~~ 390 (540)
T 3gwf_A 336 YYEVYNRPNVEAVAIKENPIREVTAKG----VVTEDGVLHELDVLVFATGFDAVDGNYR 390 (540)
T ss_dssp TGGGGGSTTEEEEETTTSCEEEECSSE----EEETTCCEEECSEEEECCCBSCSSHHHH
T ss_pred HHHHhcCCCEEEEeCCCCCccEEecCe----EEcCCCCEEECCEEEECCccCccccCcC
Confidence 34455677899985 78888886543 778889789999999999988543 443
No 261
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.75 E-value=0.00026 Score=72.54 Aligned_cols=63 Identities=11% Similarity=0.109 Sum_probs=42.3
Q ss_pred HHHHHHHHHcCcEEEeCceEEEEEEc------C---CeEEE--EcCCCcEEE--cCEEEEcCCcCh-HHH--HHhcCCC
Q psy7710 208 RVMGEEFCELGGEIRLNQQVESFKEN------P---ESVTI--STKQGDHLE--SSYALVCAGLQA-DEM--ALKSGCS 270 (473)
Q Consensus 208 ~~l~~~~~~~Gv~i~~~~~V~~i~~~------~---~~v~v--~~~~g~~i~--ad~VV~aaG~~s-~~l--~~~~g~~ 270 (473)
..+.+.+++.|+++++++.++++... + +.+.+ ...+|.++. +|.||+|+|... ..+ ++.+|++
T Consensus 330 ~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~ 408 (598)
T 2x8g_A 330 EKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVK 408 (598)
T ss_dssp HHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCC
T ss_pred HHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCce
Confidence 34566777889999999988888642 2 44444 345665554 999999999873 233 3455554
No 262
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.73 E-value=0.00047 Score=67.55 Aligned_cols=59 Identities=14% Similarity=0.233 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcC--CCcEEEcCEEEEcCCcChHHHHHh
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTK--QGDHLESSYALVCAGLQADEMALK 266 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~--~g~~i~ad~VV~aaG~~s~~l~~~ 266 (473)
+...+.+.++++|++++++++|++|+. +.+.++.. ++.++.+|.||+|+|......+..
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~ 262 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVAS 262 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECEEECCHHHHT
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCCCccchhHhh
Confidence 456677888999999999999999854 34555432 256899999999999875444443
No 263
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.71 E-value=0.00036 Score=68.49 Aligned_cols=62 Identities=13% Similarity=0.198 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEc--CC-----CcEEEcCEEEEcCCcCh-HHHHHhcCC
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTIST--KQ-----GDHLESSYALVCAGLQA-DEMALKSGC 269 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~--~~-----g~~i~ad~VV~aaG~~s-~~l~~~~g~ 269 (473)
....+.+.++++|++++++++|+++.. +.+.+.. .+ +.++.+|.||+|+|... ..+....|+
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl 279 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL 279 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccc
Confidence 455677888899999999999999864 3444432 33 45789999999998653 344433343
No 264
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.70 E-value=0.0002 Score=66.77 Aligned_cols=46 Identities=17% Similarity=0.190 Sum_probs=36.4
Q ss_pred HHcCcEEEeCceEEEEEEcCCe---EEEEcCCCc--EEEcCEEEEcCCcCh
Q psy7710 215 CELGGEIRLNQQVESFKENPES---VTISTKQGD--HLESSYALVCAGLQA 260 (473)
Q Consensus 215 ~~~Gv~i~~~~~V~~i~~~~~~---v~v~~~~g~--~i~ad~VV~aaG~~s 260 (473)
++.|++++++++|.++..++++ +.+.+.+|. ++.+|.||+|+|...
T Consensus 194 ~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp HCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEE
T ss_pred hcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCC
Confidence 5679999999999999887744 334444674 789999999999863
No 265
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.69 E-value=0.00017 Score=67.86 Aligned_cols=33 Identities=21% Similarity=0.357 Sum_probs=30.4
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.+|+|||+|.+|+.+|..|++. |.+|+++++.+
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~--g~~V~lv~~~~ 192 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKY--GSKVYIIHRRD 192 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT--SSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHhc--CCeEEEEecCC
Confidence 3799999999999999999998 89999999874
No 266
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.63 E-value=4.5e-05 Score=72.06 Aligned_cols=35 Identities=29% Similarity=0.298 Sum_probs=32.3
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
+||+|||||++|+.+|+.|+++ |.+|+|+|+.+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~--G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL--GVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHC--CCcEEEEeccCCc
Confidence 6899999999999999999999 9999999997543
No 267
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.59 E-value=0.00058 Score=68.96 Aligned_cols=34 Identities=15% Similarity=0.281 Sum_probs=31.3
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKE 93 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~ 93 (473)
.+|+|||+|.+|+-+|..|++. +.+|+++++.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~--~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQ--AEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--BSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhh--CCEEEEEECCCC
Confidence 4699999999999999999999 899999999853
No 268
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.59 E-value=0.00022 Score=67.25 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=30.3
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.+|+|||+|.+|+.+|..|++. |.+|+++++.+
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~--g~~V~l~~~~~ 188 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRF--ARSVTLVHRRD 188 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTT--CSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHh--CCeEEEEEcCC
Confidence 4799999999999999999998 89999999874
No 269
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.56 E-value=6e-05 Score=78.14 Aligned_cols=41 Identities=29% Similarity=0.524 Sum_probs=37.3
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCcc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQ 98 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~ 98 (473)
..+||+|||||++|+++|+.|+++ |.+|+|+|+.+.+||..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~--g~~v~~~e~~~~~gg~~ 146 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSF--GMDVTLLEARDRVGGRV 146 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHT--TCEEEEECSSSSSBTTC
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC--CCeEEEEecCCCCCCcc
Confidence 467999999999999999999999 99999999988888753
No 270
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.55 E-value=6.4e-05 Score=79.46 Aligned_cols=40 Identities=30% Similarity=0.549 Sum_probs=36.9
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMH 97 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~ 97 (473)
...||+|||||++||++|+.|+++ |.+|+|+|+.+.+||.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~--g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSF--GMDVTLLEARDRVGGR 316 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCcEEEEEecCcCCCc
Confidence 457999999999999999999999 9999999999888875
No 271
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.50 E-value=8.7e-05 Score=77.80 Aligned_cols=40 Identities=28% Similarity=0.425 Sum_probs=35.9
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMH 97 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~ 97 (473)
..+||+|||||++|+++|+.|+++ |.+|+|||+.+.+|+.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~--G~~Vtlie~~~~~GG~ 427 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES--GYTVHLTDTAEKIGGH 427 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSTTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCCCcCCe
Confidence 457999999999999999999999 8999999998766654
No 272
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.45 E-value=0.00085 Score=66.21 Aligned_cols=46 Identities=15% Similarity=0.236 Sum_probs=33.5
Q ss_pred cCcEEEeCceEEEEEEcC-C-eE-EEEcC---------------CC--cEEEcCEEEEcCCcChHH
Q psy7710 217 LGGEIRLNQQVESFKENP-E-SV-TISTK---------------QG--DHLESSYALVCAGLQADE 262 (473)
Q Consensus 217 ~Gv~i~~~~~V~~i~~~~-~-~v-~v~~~---------------~g--~~i~ad~VV~aaG~~s~~ 262 (473)
+|+++++++.+.+|..++ + .+ .|++. +| .++.||.||+|+|.....
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP 335 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCC
Confidence 899999999999998763 3 22 22221 23 478999999999987543
No 273
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.43 E-value=0.00012 Score=76.22 Aligned_cols=38 Identities=26% Similarity=0.407 Sum_probs=34.4
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCccc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELG 95 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g 95 (473)
..+||+|||||++|+++|..|+++ |.+|+|||+.+.+|
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~--g~~V~lie~~~~~g 409 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAAR--GHQVTLFDAHSEIG 409 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCCCCC
Confidence 357999999999999999999999 89999999986554
No 274
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.42 E-value=0.00044 Score=69.50 Aligned_cols=33 Identities=33% Similarity=0.388 Sum_probs=30.4
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.+|+|||+|.+|+-+|..|++. +.+|+++++.+
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~--g~~Vtlv~~~~ 388 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGI--VEHVTLLEFAP 388 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--BSEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhh--CCEEEEEEeCc
Confidence 3799999999999999999999 89999999874
No 275
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.34 E-value=0.0001 Score=75.81 Aligned_cols=37 Identities=27% Similarity=0.486 Sum_probs=34.1
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCC--------CeEEEEeccC-cc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPK--------MKICLVEKEK-EL 94 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G--------~~V~viE~~~-~~ 94 (473)
...+|+|||||++||++|+.|+++ | .+|+|+|+.+ ++
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~--g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRL--AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHH--HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHc--CcccccCCCceEEEEeccCccc
Confidence 357899999999999999999998 7 8999999997 78
No 276
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.34 E-value=0.00057 Score=73.86 Aligned_cols=56 Identities=13% Similarity=0.207 Sum_probs=40.0
Q ss_pred HHHHcCcEEEeCceEEEEEEc--CC--eEEEEc--C---CC--cEEEcCEEEEcCCcC-hHHHHHhcC
Q psy7710 213 EFCELGGEIRLNQQVESFKEN--PE--SVTIST--K---QG--DHLESSYALVCAGLQ-ADEMALKSG 268 (473)
Q Consensus 213 ~~~~~Gv~i~~~~~V~~i~~~--~~--~v~v~~--~---~g--~~i~ad~VV~aaG~~-s~~l~~~~g 268 (473)
.+++.|++|++++.|+++..+ +. .+.+.. . +| .++.+|.||+|+|.. ...++...+
T Consensus 325 ~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 325 QAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHTT
T ss_pred HHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhCC
Confidence 356789999999999999873 33 233433 1 24 579999999999986 346666554
No 277
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.30 E-value=0.00078 Score=66.41 Aligned_cols=56 Identities=11% Similarity=0.129 Sum_probs=39.2
Q ss_pred HHHHHHHHHH------cCcEEEeCceEEEEEEcCC--eEEEEc--------------CCC--cEEEcCEEEEcCCcChHH
Q psy7710 207 TRVMGEEFCE------LGGEIRLNQQVESFKENPE--SVTIST--------------KQG--DHLESSYALVCAGLQADE 262 (473)
Q Consensus 207 ~~~l~~~~~~------~Gv~i~~~~~V~~i~~~~~--~v~v~~--------------~~g--~~i~ad~VV~aaG~~s~~ 262 (473)
.+.|.+.+++ +|+++++++.+.+|..++. ++.+.. .+| .++.||.||+|+|..+..
T Consensus 249 ~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 249 IKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP 328 (456)
T ss_dssp HHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC
T ss_pred HHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC
Confidence 4455666655 7999999999999986543 233321 133 468999999999987543
No 278
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.28 E-value=0.00014 Score=71.84 Aligned_cols=39 Identities=21% Similarity=0.185 Sum_probs=33.8
Q ss_pred cccEEEEcCChHHHHHHHHHHh-cCC----CCeEEEEeccCccc
Q psy7710 57 LYDVVVVGGGIVGVATARELKL-NYP----KMKICLVEKEKELG 95 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~-~~~----G~~V~viE~~~~~g 95 (473)
.+||+|||||++|+++|..|++ ..+ |.+|+|||+.+.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~g 46 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPW 46 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCC
Confidence 5799999999999999999998 643 68999999986554
No 279
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.27 E-value=0.00021 Score=70.61 Aligned_cols=40 Identities=25% Similarity=0.243 Sum_probs=33.9
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCccc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELG 95 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g 95 (473)
..+||+|||||++|+++|..|++.+++.+|+|||+.+.++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 4579999999999999999999993339999999986553
No 280
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.24 E-value=0.00027 Score=71.81 Aligned_cols=55 Identities=13% Similarity=0.207 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHcCcEEEeCceEEEEEEcC--CeE-EEEcCCCcEEEcCEEEEcCCc
Q psy7710 204 GLVTRVMGEEFCELGGEIRLNQQVESFKENP--ESV-TISTKQGDHLESSYALVCAGL 258 (473)
Q Consensus 204 ~~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~ad~VV~aaG~ 258 (473)
..+.++|.+.++..|++|+++++|.+|..++ +++ .|.+.+|++++||.||.....
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~ 435 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSY 435 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGG
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhh
Confidence 6788999999999999999999999998776 544 466677889999999885543
No 281
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.23 E-value=0.00057 Score=71.63 Aligned_cols=32 Identities=16% Similarity=0.202 Sum_probs=29.9
Q ss_pred cEEEEc--CChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 59 DVVVVG--GGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 59 dVvIIG--aGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
+|+||| +|.+|+.+|..|++. |.+|+++++.+
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~--G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATA--GHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHc--CCEEEEEeccc
Confidence 799999 999999999999999 89999999873
No 282
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.16 E-value=0.0032 Score=68.49 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=29.4
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCC-eEEEEeccC
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKM-KICLVEKEK 92 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~~ 92 (473)
+|+|||||.+|+-+|..|++. |. +|+++++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~--G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRC--GARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHT--TCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHc--CCCEEEEEEecC
Confidence 799999999999999999999 75 899999873
No 283
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.14 E-value=0.0017 Score=63.09 Aligned_cols=58 Identities=12% Similarity=0.285 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcChHHHHHhc
Q psy7710 206 VTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQADEMALKS 267 (473)
Q Consensus 206 ~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s~~l~~~~ 267 (473)
+.+.+.+.+++.|++++++++|+++..+ . |.+.+|+++++|.||+|+|...+.++..+
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~~~~~l~~~ 277 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYTGNPALKNS 277 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEECCHHHHTS
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCCccHHHHhc
Confidence 4455677778889999999999998643 2 56677879999999999999876777765
No 284
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.12 E-value=0.00073 Score=66.56 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=29.4
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKM-KICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~~ 92 (473)
.+|+|||||.+|+-+|..+.+. |. +|+++++.+
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~--Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQ--GATSVKCLYRRD 298 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT--TCSEEEEECSSC
T ss_pred CEEEEECCChhHHHHHHHHHHc--CCCEEEEEEeCC
Confidence 4699999999999999999998 76 599999874
No 285
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.00 E-value=0.0025 Score=63.53 Aligned_cols=35 Identities=26% Similarity=0.429 Sum_probs=31.7
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
.+|+|||+|.+|+.+|..|++. |.+|+++++.+.+
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARL--GAKVTVVEFLDTI 233 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCEEEEEeccccc
Confidence 4689999999999999999999 8999999998644
No 286
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.85 E-value=0.018 Score=58.02 Aligned_cols=33 Identities=15% Similarity=0.345 Sum_probs=30.4
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|+|||+|.+|+-+|..|++. +.+|+++++.+
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~--~~~vtv~~r~~ 219 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQ--AAELFVFQRTP 219 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--BSEEEEEESSC
T ss_pred CEEEEECCCccHHHHHHHHhhc--CceEEEEEcCC
Confidence 4699999999999999999999 89999999874
No 287
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=96.69 E-value=0.0048 Score=61.30 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=31.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
.+++|||+|.+|+.+|..|++. |.+|+++++.+.+
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~--g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGL--GVKTTLLHRGDLI 226 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHc--CCeEEEEECCCcc
Confidence 4799999999999999999999 8999999998543
No 288
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.66 E-value=0.0013 Score=62.20 Aligned_cols=31 Identities=19% Similarity=0.380 Sum_probs=28.5
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+|+|||+|.+|+.+|..|++. + +|+++.+.
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~--~-~v~~v~~~ 194 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTV--A-ETTWITQH 194 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT--S-EEEEECSS
T ss_pred CEEEEECCCcCHHHHHHHHHhh--C-CEEEEECC
Confidence 4799999999999999999998 6 69999886
No 289
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.64 E-value=0.0059 Score=60.55 Aligned_cols=35 Identities=26% Similarity=0.309 Sum_probs=31.8
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
.+|+|||+|.+|+.+|..|++. |.+|+++++.+.+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~ 222 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSAL--GSKTSLMIRHDKV 222 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHc--CCeEEEEEeCCcc
Confidence 4799999999999999999999 8999999997543
No 290
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.53 E-value=0.006 Score=60.25 Aligned_cols=34 Identities=12% Similarity=-0.021 Sum_probs=31.0
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..+|+|||+|.+|+-+|..|++. |.+|+++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~--g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKY--GAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHT--TCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHHh--CCeEEEEEECC
Confidence 35799999999999999999999 89999999874
No 291
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.45 E-value=0.0035 Score=61.63 Aligned_cols=33 Identities=24% Similarity=0.155 Sum_probs=30.1
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCe-EEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMK-ICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~-V~viE~~~ 92 (473)
.+|+|||+|.+|+-+|..|++. +.+ |+++++.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~--~~~~V~l~~r~~ 246 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPV--AKHPIYQSLLGG 246 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTT--SCSSEEEECTTC
T ss_pred CEEEEEccCcCHHHHHHHHHHH--hCCcEEEEeCCC
Confidence 4699999999999999999999 888 99999873
No 292
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.16 E-value=0.0069 Score=60.28 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=49.6
Q ss_pred HHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcCh-HHHHHhcCCC
Q psy7710 212 EEFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQA-DEMALKSGCS 270 (473)
Q Consensus 212 ~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~s-~~l~~~~g~~ 270 (473)
+.++++|++|++++.|+++..+++...|.+.+|.++++|.||+|+|.+. ..|++.+|++
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~ 324 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGK 324 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCC
Confidence 6778889999999999999876554557777787899999999999984 4688988875
No 293
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.60 E-value=0.018 Score=46.34 Aligned_cols=34 Identities=21% Similarity=0.377 Sum_probs=31.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
+-.|+|||.|-.|..+|..|.+. |.+|+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCH
Confidence 45799999999999999999999 89999999974
No 294
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.43 E-value=0.016 Score=46.38 Aligned_cols=32 Identities=25% Similarity=0.426 Sum_probs=30.0
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+|+|||+|..|..+|..|.+. |.+|+++|+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECC
Confidence 5799999999999999999999 8999999986
No 295
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=95.39 E-value=0.065 Score=55.65 Aligned_cols=34 Identities=21% Similarity=0.222 Sum_probs=30.8
Q ss_pred cEEEEc--CChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 59 DVVVVG--GGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 59 dVvIIG--aGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
+|+||| +|.+|+.+|..|++. |.+|+++++.+.+
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~--g~~Vtlv~~~~~l 560 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQK--GYEVSIVTPGAQV 560 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHT--TCEEEEEESSSST
T ss_pred EEEEEcCCCCccHHHHHHHHHhC--CCeeEEEeccccc
Confidence 599999 999999999999999 8999999987543
No 296
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.18 E-value=0.024 Score=46.46 Aligned_cols=34 Identities=21% Similarity=0.283 Sum_probs=31.0
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|+|||+|..|..+|..|.+. |.+|+++++.+
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCH
Confidence 45799999999999999999999 89999999874
No 297
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.11 E-value=0.023 Score=45.68 Aligned_cols=33 Identities=36% Similarity=0.591 Sum_probs=30.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|+|+|+|..|..+|..|.++ |.+|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCH
Confidence 4699999999999999999999 89999999873
No 298
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.09 E-value=0.026 Score=43.51 Aligned_cols=33 Identities=24% Similarity=0.494 Sum_probs=30.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCC-CeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPK-MKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G-~~V~viE~~ 91 (473)
...|+|+|+|..|..++..|.+. | .+|+++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~--g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS--SNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--SSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCceEEEEeCC
Confidence 35799999999999999999999 7 899999986
No 299
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=94.88 E-value=0.018 Score=57.80 Aligned_cols=38 Identities=34% Similarity=0.545 Sum_probs=31.9
Q ss_pred CCCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEecccc
Q psy7710 7 PTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEKE 45 (473)
Q Consensus 7 ~~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~~ 45 (473)
...|||+|||+|++|+++|.+|+ ..++.+++++|+.+.
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLs-e~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLS-EDPDSRVLLIEAGEE 52 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHT-TSTTSCEEEECSSBC
T ss_pred CCCeeEEEECccHHHHHHHHHHH-hCCCCeEEEEcCCCC
Confidence 45799999999999999999999 457889999997754
No 300
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=94.79 E-value=0.019 Score=58.03 Aligned_cols=37 Identities=27% Similarity=0.579 Sum_probs=32.8
Q ss_pred CCCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 7 PTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 7 ~~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
...|||+|||+|++|+++|.+|+ ..|+.++.++|+.+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLs-e~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLT-ENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHT-TSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHH-hCCCCcEEEEecCC
Confidence 46799999999999999999998 45788999998776
No 301
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=94.69 E-value=0.023 Score=57.49 Aligned_cols=38 Identities=32% Similarity=0.554 Sum_probs=33.0
Q ss_pred CCCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEecccc
Q psy7710 7 PTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEKE 45 (473)
Q Consensus 7 ~~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~~ 45 (473)
...|||+|||+|.+|+++|.+|+ ..++.++.++|+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLs-e~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLA-ENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHT-TSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHH-hCCCCcEEEEecCCC
Confidence 46799999999999999999999 457789999987765
No 302
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=94.67 E-value=0.031 Score=52.14 Aligned_cols=37 Identities=27% Similarity=0.623 Sum_probs=30.2
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
..+|.+|||+|.+|.++|..++....+.++.++++.+
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~ 100 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4579999999999999999998655677888776543
No 303
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.60 E-value=0.041 Score=44.90 Aligned_cols=32 Identities=16% Similarity=0.293 Sum_probs=30.0
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..|+|+|+|..|...|..|.+. |.+|+++|+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~--g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR--GQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCCEEEEECC
Confidence 4699999999999999999999 8999999986
No 304
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=94.59 E-value=0.07 Score=54.26 Aligned_cols=43 Identities=21% Similarity=0.335 Sum_probs=39.1
Q ss_pred CCcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcccCccc
Q psy7710 55 PALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKELGMHQT 99 (473)
Q Consensus 55 ~~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~g~~~s 99 (473)
+.+|||+|||+|+.|...|..|++. |.+|++|||++.+|+...
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~--g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRS--GQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSSCGGGC
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhC--CCEEEEEcCCCcccCccc
Confidence 4579999999999999999999999 999999999988887653
No 305
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.43 E-value=0.033 Score=51.49 Aligned_cols=33 Identities=30% Similarity=0.421 Sum_probs=30.3
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
...|.|||+|..|...|..++.+ |++|+++|..
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhC--CCeEEEEECC
Confidence 35799999999999999999999 9999999986
No 306
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.21 E-value=0.052 Score=50.70 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=31.0
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEeccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKEK 92 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~~ 92 (473)
...+|+|||+|..|.++|..|+.. |. +|+++|...
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~--g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCh
Confidence 346899999999999999999998 77 999999873
No 307
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.13 E-value=0.043 Score=53.80 Aligned_cols=35 Identities=29% Similarity=0.249 Sum_probs=31.8
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
.+++|||+|.+|+.+|..|++. |.+|+|+|+.+.+
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~--g~~Vtlv~~~~~~ 202 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGL--GAKTHLFEMFDAP 202 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCEEEEEEeCCch
Confidence 4799999999999999999999 9999999998543
No 308
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.83 E-value=0.13 Score=48.93 Aligned_cols=34 Identities=12% Similarity=0.248 Sum_probs=30.9
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|+|||+|.+|+.+|..|... |.+|+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCH
Confidence 35799999999999999999998 89999999873
No 309
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.81 E-value=0.087 Score=51.27 Aligned_cols=34 Identities=29% Similarity=0.503 Sum_probs=31.3
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|.|||+|..|...|..|+++ |.+|+++|+.+
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~ 87 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNE 87 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcH
Confidence 35799999999999999999999 99999999874
No 310
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.80 E-value=0.051 Score=43.48 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=29.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..|+|+|+|..|..+|..|.+. |.+|+++++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM--GHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCCEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCC
Confidence 3599999999999999999999 8999999986
No 311
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.73 E-value=0.069 Score=49.20 Aligned_cols=32 Identities=28% Similarity=0.532 Sum_probs=30.0
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..|.|||+|..|...|..|+++ |.+|+++|+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECC
Confidence 4699999999999999999999 8999999986
No 312
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.54 E-value=0.16 Score=47.99 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=30.9
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|+|||+|.+|+.+|..|... |.+|+++|+.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL--GAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 35799999999999999999999 89999999873
No 313
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.50 E-value=0.056 Score=47.11 Aligned_cols=32 Identities=22% Similarity=0.496 Sum_probs=29.9
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
+|+|||+|..|..+|..|.++ |.+|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~--g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR--KYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT--TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC--CCeEEEEECCH
Confidence 599999999999999999999 89999999874
No 314
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=93.48 E-value=0.066 Score=52.86 Aligned_cols=35 Identities=23% Similarity=0.325 Sum_probs=31.9
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
.+|+|||+|.+|+.+|..|++. |.+|+++|+.+.+
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRL--GADVTAVEFLGHV 213 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHc--CCEEEEEeccCcc
Confidence 4699999999999999999999 8999999998654
No 315
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.42 E-value=0.084 Score=48.12 Aligned_cols=32 Identities=19% Similarity=0.366 Sum_probs=30.1
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..|.|||+|..|...|..|+++ |.+|+++|+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCC
Confidence 4699999999999999999999 9999999987
No 316
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=93.39 E-value=0.038 Score=55.75 Aligned_cols=37 Identities=30% Similarity=0.364 Sum_probs=32.3
Q ss_pred CCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccccc
Q psy7710 9 LYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEKEF 46 (473)
Q Consensus 9 ~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~~~ 46 (473)
+|||+|||+|++|+++|.+|+. .++.++.++|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse-~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTE-DPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTT-STTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHh-CcCCcEEEEecCCcc
Confidence 5999999999999999999994 578899999877543
No 317
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=93.34 E-value=0.072 Score=52.87 Aligned_cols=35 Identities=17% Similarity=0.333 Sum_probs=32.1
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
.+|+|||+|.+|+.+|..|++. |.+|+++++.+.+
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~--g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRL--GVIVKVFGRSGSV 209 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHT--TCEEEEECCTTCC
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCeEEEEEECCcc
Confidence 4799999999999999999999 9999999998654
No 318
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.20 E-value=0.079 Score=49.26 Aligned_cols=33 Identities=18% Similarity=0.358 Sum_probs=30.5
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.+|.|||+|..|.+.|..|++. |.+|++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCh
Confidence 4699999999999999999999 89999999873
No 319
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.08 E-value=0.075 Score=47.83 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=30.7
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
...|+|||+|-+|+..|..|.+. |.+|+|++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~--Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT--GCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG--TCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC--CCEEEEEcCC
Confidence 45799999999999999999999 9999999986
No 320
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.06 E-value=0.097 Score=51.65 Aligned_cols=34 Identities=29% Similarity=0.499 Sum_probs=30.9
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+|.|||.|..|+..|..|+++++|.+|+++|+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 5799999999999999999998556899999986
No 321
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=92.94 E-value=0.07 Score=51.94 Aligned_cols=64 Identities=17% Similarity=0.315 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHcCcEEEeCceEEEEEEcCCeEEEEcCCC--cEEEcCEEEEcCCcChHHHHHhcCCC
Q psy7710 205 LVTRVMGEEFCELGGEIRLNQQVESFKENPESVTISTKQG--DHLESSYALVCAGLQADEMALKSGCS 270 (473)
Q Consensus 205 ~~~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g--~~i~ad~VV~aaG~~s~~l~~~~g~~ 270 (473)
...+.+.+.++++|+++++++.|++++ ++++.++..+| +++.+|.||+|+|...+.++..++..
T Consensus 201 ~~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~ 266 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDK 266 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTT
T ss_pred HHHHHHHHHHHhCCeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccCCCchHHHhcccc
Confidence 345567778889999999999999885 45566666554 57999999999998876777766543
No 322
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.87 E-value=0.11 Score=45.20 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=30.9
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
....|+|||||-+|...|..|.+. |.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCC
Confidence 345799999999999999999999 9999999875
No 323
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.79 E-value=0.092 Score=48.67 Aligned_cols=33 Identities=30% Similarity=0.427 Sum_probs=30.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|.|||+|..|...|..|+++ |++|+++|+.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 5699999999999999999999 99999999873
No 324
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.77 E-value=0.083 Score=48.91 Aligned_cols=32 Identities=16% Similarity=0.345 Sum_probs=29.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+|.|||+|..|.+.|..|++. |.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS--GEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT--SCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEEcC
Confidence 4699999999999999999999 8999999986
No 325
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=92.72 E-value=0.099 Score=52.39 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=30.5
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.+++|||||.+|+-.|..+++. |.+|+|+++..
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~l--G~~VTii~~~~ 256 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSL--GYDVTVAVRSI 256 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEEESSC
T ss_pred ceEEEECCCHHHHHHHHHHHhc--CCeEEEecccc
Confidence 4799999999999999999999 99999999863
No 326
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.71 E-value=0.11 Score=48.07 Aligned_cols=34 Identities=18% Similarity=0.346 Sum_probs=30.6
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~~ 92 (473)
..+|.|||+|..|.+.|..|++. |. +|+++|+..
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~--g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD--NLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCc
Confidence 35799999999999999999999 77 999999863
No 327
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.64 E-value=0.12 Score=46.18 Aligned_cols=34 Identities=24% Similarity=0.482 Sum_probs=28.8
Q ss_pred CCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 9 LYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 9 ~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
++|.+|||+|++|.++|..|+.. +.++.++++.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~--G~~V~v~Ek~~ 35 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCC
Confidence 57999999999999999999854 67788887654
No 328
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.64 E-value=0.1 Score=51.40 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=30.9
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
+++|.|||+|..|+.+|..|++. |.+|+++|+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSC
T ss_pred CceEEEECcCHHHHHHHHHHHhC--CCEEEEEECC
Confidence 46799999999999999999999 8999999986
No 329
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=92.55 E-value=0.11 Score=51.22 Aligned_cols=35 Identities=14% Similarity=0.291 Sum_probs=31.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
.+|+|||+|.+|+.+|..|++. |.+|+++++.+.+
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~--g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARL--GSKVTVLARNTLF 211 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCEEEEEEECCcc
Confidence 4699999999999999999999 8999999997543
No 330
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.53 E-value=0.11 Score=48.12 Aligned_cols=33 Identities=24% Similarity=0.320 Sum_probs=30.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC--eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM--KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~ 91 (473)
..+|+|||+|..|.+.|..|++. |. +|+++|+.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~--g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR--GIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCC
Confidence 35799999999999999999998 77 99999986
No 331
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.46 E-value=0.13 Score=50.35 Aligned_cols=33 Identities=24% Similarity=0.171 Sum_probs=30.8
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
...|.|||.|.+|+++|..|+++ |.+|++.|+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~--G~~V~~~D~~ 41 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKL--GAIVTVNDGK 41 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHT--TCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEeCC
Confidence 45799999999999999999999 9999999986
No 332
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.42 E-value=0.14 Score=44.26 Aligned_cols=34 Identities=12% Similarity=0.307 Sum_probs=30.6
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|.|||+|..|.+.|..|++. |.+|+++++.+
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~--g~~V~~~~~~~ 52 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA--GHEVTYYGSKD 52 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCH
Confidence 45799999999999999999999 89999999874
No 333
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.32 E-value=0.13 Score=48.56 Aligned_cols=33 Identities=27% Similarity=0.261 Sum_probs=30.8
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..+|.|||+|..|.+.|..|+++ |.+|+++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK--GQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT--TCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCC
Confidence 46799999999999999999999 8999999986
No 334
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.27 E-value=0.14 Score=47.75 Aligned_cols=32 Identities=16% Similarity=0.355 Sum_probs=29.8
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
.+|.|||+|..|.++|+.|+.. |. +|+++|..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~--g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK--DLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECC
Confidence 5799999999999999999999 77 99999986
No 335
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.17 E-value=0.14 Score=46.78 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=30.4
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
+..|.|||+|..|...|..|+ + |.+|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCH
Confidence 567999999999999999999 8 99999999873
No 336
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.11 E-value=0.086 Score=51.68 Aligned_cols=34 Identities=26% Similarity=0.460 Sum_probs=31.4
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.++|+|+|+|-.|.++|..|.+. |.+|+|||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~--~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE--NNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST--TEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHC--CCCEEEEECCH
Confidence 46799999999999999999998 89999999874
No 337
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.11 E-value=0.13 Score=47.42 Aligned_cols=32 Identities=16% Similarity=0.327 Sum_probs=29.9
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+|.|||+|..|...|..|++. |.+|+++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCcEEEEECC
Confidence 4699999999999999999999 8999999986
No 338
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.10 E-value=0.19 Score=46.35 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=31.5
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...+|.|||.|..|...|..|++. |.+|+++++.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~--G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ--GKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 346799999999999999999999 89999999863
No 339
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.09 E-value=0.098 Score=47.94 Aligned_cols=32 Identities=28% Similarity=0.463 Sum_probs=30.0
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+|.|||+|..|.+.|..|++. |.+|++++|.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~--g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS--LPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--CTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHC--CCeEEEEEec
Confidence 4699999999999999999999 8899999987
No 340
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.09 E-value=0.14 Score=47.94 Aligned_cols=32 Identities=25% Similarity=0.369 Sum_probs=29.9
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+|.|||+|..|.+.|..|++. |.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA--GEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT--TCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEEECh
Confidence 4799999999999999999999 8999999985
No 341
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.02 E-value=0.082 Score=50.40 Aligned_cols=36 Identities=39% Similarity=0.525 Sum_probs=30.3
Q ss_pred CCCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 7 PTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 7 ~~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
|..||.+|||+|++|.++|..|+.. +.++.++++.+
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~--G~~V~v~Er~~ 37 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKY--GLKTLMIEKRP 37 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 4569999999999999999999854 67888888754
No 342
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.98 E-value=0.14 Score=46.57 Aligned_cols=32 Identities=16% Similarity=0.103 Sum_probs=29.7
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
+|.|||+|..|...|..|++. |.+|+++++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ--GHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCc
Confidence 589999999999999999999 89999999874
No 343
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.91 E-value=0.19 Score=46.42 Aligned_cols=33 Identities=30% Similarity=0.444 Sum_probs=30.3
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
..+|.|||+|..|.++|+.|+.. |. +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~--g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQK--ELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEecc
Confidence 45799999999999999999998 78 99999986
No 344
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.76 E-value=0.15 Score=45.31 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=30.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
...|+|||+|-.|..+|..|++. |. +++|+|++
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~--Gv~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA--GVGNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc--CCCeEEEEcCC
Confidence 35799999999999999999999 75 89999987
No 345
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.75 E-value=0.16 Score=46.78 Aligned_cols=31 Identities=39% Similarity=0.576 Sum_probs=28.9
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCC--eEEEEecc
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKM--KICLVEKE 91 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~ 91 (473)
+|+|||+|..|.++|+.|+.. |. +|+++|..
T Consensus 2 kI~VIGaG~vG~~la~~la~~--g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR--GSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCC
Confidence 599999999999999999998 77 99999986
No 346
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.65 E-value=0.19 Score=46.67 Aligned_cols=33 Identities=21% Similarity=0.401 Sum_probs=29.8
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
..+|.|||+|..|..+|..|+.. |. +|+++|..
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~--g~~~v~L~Di~ 37 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIV 37 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCC
Confidence 35799999999999999999998 76 89999976
No 347
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.64 E-value=0.2 Score=46.28 Aligned_cols=35 Identities=26% Similarity=0.367 Sum_probs=31.7
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...+|.|||.|..|...|..|++. |.+|+++++.+
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~--G~~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKN--GFKVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCH
Confidence 346799999999999999999999 89999999873
No 348
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.54 E-value=0.2 Score=48.38 Aligned_cols=34 Identities=24% Similarity=0.292 Sum_probs=31.4
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+..|.|||.|..|+.+|..|+++ |.+|+.+|-+
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~--G~~V~g~Did 53 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALL--GHRVVGYDVN 53 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC--CCcEEEEECC
Confidence 456899999999999999999999 9999999976
No 349
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.53 E-value=0.16 Score=49.56 Aligned_cols=33 Identities=24% Similarity=0.413 Sum_probs=30.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
++|.|||+|..|+.+|..|+++ |.+|+++|+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCH
Confidence 4799999999999999999999 89999999873
No 350
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=91.53 E-value=0.17 Score=46.62 Aligned_cols=31 Identities=26% Similarity=0.447 Sum_probs=29.0
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
++|+|||+|..|...|..|+ . |.+|++++|.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~--g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L--YHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T--TSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-c--CCceEEEECC
Confidence 57999999999999999999 8 8999999987
No 351
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.34 E-value=0.18 Score=47.52 Aligned_cols=32 Identities=25% Similarity=0.171 Sum_probs=29.9
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+|.|||+|..|...|..|++. |.+|+++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCC
Confidence 5799999999999999999999 8999999986
No 352
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.29 E-value=0.19 Score=49.31 Aligned_cols=34 Identities=21% Similarity=0.462 Sum_probs=30.9
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+|.|||.|..|+..|..|++.++|.+|+++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 5799999999999999999998556899999986
No 353
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.22 E-value=0.2 Score=47.15 Aligned_cols=34 Identities=32% Similarity=0.482 Sum_probs=31.3
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
.+.+|+|+|||.+|+.+|..|... |. +|+++|+.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~--Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAA--GATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH--TCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHc--CCCeEEEEECC
Confidence 457899999999999999999999 88 99999997
No 354
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.97 E-value=0.22 Score=48.38 Aligned_cols=34 Identities=18% Similarity=0.326 Sum_probs=31.5
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
+..+.|||.|..|+.+|..|+++ |.+|+++++++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~ 41 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDA 41 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 46799999999999999999999 99999999874
No 355
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.94 E-value=0.24 Score=45.74 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=29.7
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
+|+|||+|..|.++|..|++.+.+.+|+++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 5999999999999999999853368999999873
No 356
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.92 E-value=0.22 Score=46.59 Aligned_cols=33 Identities=24% Similarity=0.285 Sum_probs=30.7
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.++|.|||+|..|...|..|+++ |.+|+++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~--G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN--GEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCeEEEEeCC
Confidence 46899999999999999999999 8999999986
No 357
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.91 E-value=0.22 Score=46.17 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=31.6
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...+|.|||.|..|...|..|++. |.+|+++++.+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCH
Confidence 346899999999999999999999 89999999873
No 358
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.90 E-value=0.19 Score=49.30 Aligned_cols=32 Identities=25% Similarity=0.302 Sum_probs=30.1
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..|.|||+|..|...|..|+++ |.+|+++|+.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV--GISVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEECC
Confidence 4699999999999999999999 8999999986
No 359
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.90 E-value=0.24 Score=43.90 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=31.2
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
....|.|||+|..|.+.|..|++. |.+|+++++.+
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~--G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADL--GHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCh
Confidence 346799999999999999999999 89999999873
No 360
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=90.77 E-value=0.21 Score=49.85 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=31.9
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
.+++|||+|.+|+.+|..|++. |.+|+++++.+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~--G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT--GRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCeEEEEEecCcc
Confidence 5799999999999999999999 8999999998543
No 361
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.69 E-value=0.23 Score=46.06 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=28.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
...+|.|||+|..|...|..|++. |.+|+++ +.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA--GHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-Ec
Confidence 346799999999999999999999 8999999 65
No 362
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.68 E-value=0.11 Score=41.81 Aligned_cols=32 Identities=16% Similarity=0.395 Sum_probs=29.0
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..|+|||+|..|...|..|++. |.+|+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~--g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP--QYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT--TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCC
Confidence 4599999999999999999987 8889999986
No 363
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.64 E-value=0.2 Score=45.94 Aligned_cols=34 Identities=12% Similarity=0.095 Sum_probs=31.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..+|.|||.|..|...|..|++. |.+|+++++.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS--TTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCH
Confidence 35799999999999999999999 89999999874
No 364
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.64 E-value=0.25 Score=42.77 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=29.7
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
...|.|||+|..|...|..|++. |.+|+++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~--g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGS--GFKVVVGSRN 60 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCC
Confidence 35799999999999999999998 8899999986
No 365
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.58 E-value=0.25 Score=45.43 Aligned_cols=33 Identities=21% Similarity=0.250 Sum_probs=30.7
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..+|.|||.|..|...|..|++. |.+|+++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA--GLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCeEEEEECC
Confidence 35799999999999999999999 8999999986
No 366
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.56 E-value=0.2 Score=48.68 Aligned_cols=31 Identities=23% Similarity=0.275 Sum_probs=29.3
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
+|.|||+|..|+..|..|++. |.+|+++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR--GHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC--CCEEEEEECC
Confidence 589999999999999999999 8999999986
No 367
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.52 E-value=0.26 Score=46.40 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=31.0
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
.+..|+|+|||.+|..+|..|... |. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~--G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDL--GVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH--TCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECC
Confidence 457899999999999999999999 77 89999997
No 368
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.47 E-value=0.26 Score=44.87 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=30.3
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.+|.|||.|..|...|..|++. |.+|+++++.+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA--GCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHC--CCeEEEEcCCH
Confidence 3699999999999999999999 89999999874
No 369
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=90.37 E-value=0.27 Score=48.73 Aligned_cols=37 Identities=27% Similarity=0.391 Sum_probs=31.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCC-CCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYP-KMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~-G~~V~viE~~~~~ 94 (473)
..++|||+|.+|+.+|..|++..+ |.+|+++++.+.+
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 469999999999999999988733 6899999998543
No 370
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.24 E-value=0.26 Score=47.42 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=31.1
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|+|||.|-.|..+|..|.+. |.+|++||+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCH
Confidence 35699999999999999999999 99999999874
No 371
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.20 E-value=0.29 Score=45.29 Aligned_cols=34 Identities=29% Similarity=0.422 Sum_probs=30.0
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCC--eEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKM--KICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~ 91 (473)
...+|+|||+|.+|.++|+.|+.. +. +++++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCC
Confidence 346799999999999999999998 65 89999975
No 372
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.20 E-value=0.25 Score=46.09 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=28.6
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEec
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEK 90 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~ 90 (473)
+|.|||+|..|...|..|++. |.+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~--g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN--GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH--CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC--CCeEEEEEc
Confidence 589999999999999999999 899999998
No 373
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.07 E-value=0.26 Score=45.65 Aligned_cols=31 Identities=29% Similarity=0.490 Sum_probs=28.8
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCC--eEEEEecc
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKM--KICLVEKE 91 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~ 91 (473)
+|.|||+|..|.+.|..|++. |. +|+++|+.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~--g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK--GFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCC
Confidence 589999999999999999999 77 99999986
No 374
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.03 E-value=0.31 Score=45.15 Aligned_cols=33 Identities=24% Similarity=0.481 Sum_probs=29.9
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC--eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM--KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~ 91 (473)
..+|+|||+|..|.++|+.|+.. +. +|+++|..
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~--~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR--QTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCC
Confidence 46899999999999999999998 65 89999976
No 375
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.03 E-value=0.32 Score=45.09 Aligned_cols=33 Identities=21% Similarity=0.437 Sum_probs=29.6
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC--eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM--KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~ 91 (473)
..+|.|||+|..|.++|+.|+.. |. +|+++|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~--~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ--GITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEecc
Confidence 45799999999999999999998 65 89999975
No 376
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=89.97 E-value=0.18 Score=50.62 Aligned_cols=35 Identities=37% Similarity=0.543 Sum_probs=30.5
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEecccc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEKE 45 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~~ 45 (473)
..||++|||+|++|+++|.+|+. +.++.++|+.+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse---g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE---KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT---TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc---CCcEEEEecCCC
Confidence 45999999999999999999995 578988988754
No 377
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=89.91 E-value=0.36 Score=44.65 Aligned_cols=35 Identities=29% Similarity=0.317 Sum_probs=29.4
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..+|+|||+|..|.+.|+.|+..+...+|+++|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 45899999999999999999988322389999986
No 378
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.82 E-value=0.27 Score=48.42 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=30.5
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|.|||+|..|...|..|+++ |.+|+++|+.+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCH
Confidence 4699999999999999999999 89999999873
No 379
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=89.82 E-value=0.28 Score=44.97 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=30.0
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..|.|||.|..|...|..|++. |.+|+++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC--CCeEEEEcCC
Confidence 4699999999999999999999 8999999986
No 380
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=89.80 E-value=0.33 Score=47.34 Aligned_cols=37 Identities=27% Similarity=0.470 Sum_probs=28.6
Q ss_pred CCCCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 6 SPTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 6 ~~~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
..+.||.+|||+|++|.++|..++.. +.++.++++.+
T Consensus 23 ~~~~~dVvIIGgG~aGl~aA~~la~~--G~~V~llEk~~ 59 (447)
T 2i0z_A 23 NAMHYDVIVIGGGPSGLMAAIGAAEE--GANVLLLDKGN 59 (447)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred ccCCCCEEEECCcHHHHHHHHHHHHC--CCCEEEEECCC
Confidence 34569999999999999999998854 56777777553
No 381
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=89.71 E-value=0.34 Score=41.75 Aligned_cols=31 Identities=23% Similarity=0.287 Sum_probs=28.8
Q ss_pred cEEEEc-CChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 59 DVVVVG-GGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 59 dVvIIG-aGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
+|+||| +|..|...|..|++. |.+|+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~--g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL--GHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT--TCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHC--CCEEEEEeCC
Confidence 589999 999999999999998 8999999986
No 382
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=89.63 E-value=0.31 Score=44.50 Aligned_cols=31 Identities=35% Similarity=0.397 Sum_probs=28.6
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCC--eEEEEecc
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKM--KICLVEKE 91 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~ 91 (473)
+|.|||+|..|.++|+.|++. +. +|+++|..
T Consensus 2 kI~ViGaG~vG~~la~~l~~~--~~~~~v~L~D~~ 34 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECC
Confidence 599999999999999999998 66 89999986
No 383
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=89.62 E-value=0.2 Score=48.74 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=30.3
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|.|||.|.+|+++|..|+++ |.+|++.|...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~--G~~v~~~D~~~ 38 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR--GVTPRVMDTRM 38 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT--TCCCEEEESSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC--CCEEEEEECCC
Confidence 4699999999999999999999 99999999874
No 384
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=89.57 E-value=0.34 Score=49.90 Aligned_cols=42 Identities=17% Similarity=0.169 Sum_probs=36.0
Q ss_pred CcEEEeCceEEEEEEcCCeEEEEcCC------CcEEEcCEEEEcCCcC
Q psy7710 218 GGEIRLNQQVESFKENPESVTISTKQ------GDHLESSYALVCAGLQ 259 (473)
Q Consensus 218 Gv~i~~~~~V~~i~~~~~~v~v~~~~------g~~i~ad~VV~aaG~~ 259 (473)
+++|+++++|++|..+++++.|++.+ +.+++||+||+|+...
T Consensus 410 ~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~ 457 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLG 457 (662)
T ss_dssp TCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHH
T ss_pred cCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHH
Confidence 67999999999999998888887654 4579999999999744
No 385
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.55 E-value=0.34 Score=40.62 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=29.6
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|+|||+|..|..+|..|.+.. |.+|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-GKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCH
Confidence 347999999999999999998751 47999999873
No 386
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=89.52 E-value=0.34 Score=44.61 Aligned_cols=32 Identities=28% Similarity=0.505 Sum_probs=29.0
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
.+|.|||+|..|..+|+.|+.. |. +|+++|..
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~--g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK--ELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCC
Confidence 4699999999999999999998 65 89999976
No 387
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.50 E-value=0.37 Score=44.65 Aligned_cols=34 Identities=18% Similarity=0.423 Sum_probs=30.4
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~~ 92 (473)
..+|.|||+|..|.++|+.|+.. +. +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~--~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK--ELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCc
Confidence 45799999999999999999998 67 999999863
No 388
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=89.47 E-value=0.34 Score=45.63 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=31.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..+|.|||.|..|...|..|++. |.+|+++++.+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCH
Confidence 46799999999999999999999 89999999863
No 389
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.43 E-value=0.29 Score=44.56 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=29.9
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
+|.|||.|..|...|..|++. |.+|+++++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~--G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA--GFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH--TCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCH
Confidence 599999999999999999999 89999999874
No 390
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=89.34 E-value=0.25 Score=46.83 Aligned_cols=40 Identities=28% Similarity=0.439 Sum_probs=32.4
Q ss_pred CCCCCCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccccc
Q psy7710 4 SQSPTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEKEF 46 (473)
Q Consensus 4 ~~~~~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~~~ 46 (473)
....+++|++|||+|++|+++|..|+ . +.++.++++.+..
T Consensus 4 ~~~~~~~dv~IIGaGi~Gls~A~~La-~--G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 4 HHHPIEADYLVIGAGIAGASTGYWLS-A--HGRVVVLEREAQP 43 (381)
T ss_dssp CEEEEECSEEEECCSHHHHHHHHHHT-T--TSCEEEECSSSST
T ss_pred cCCCCcCCEEEECCcHHHHHHHHHHh-C--CCCEEEEECCCCc
Confidence 34456799999999999999999998 4 6788888876433
No 391
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=89.34 E-value=0.38 Score=43.33 Aligned_cols=32 Identities=9% Similarity=0.197 Sum_probs=29.7
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..++|+|+|-+|.++|..|++. |.+|++++|.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~--G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL--DCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHc--CCEEEEEECC
Confidence 4699999999999999999999 8999999886
No 392
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=89.32 E-value=0.34 Score=44.65 Aligned_cols=32 Identities=22% Similarity=0.322 Sum_probs=29.2
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCC--CeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPK--MKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G--~~V~viE~~ 91 (473)
.+|.|||+|..|.++|..|+++ | .+|+++|+.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~--g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ--GVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEcCC
Confidence 3699999999999999999999 7 699999986
No 393
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=89.27 E-value=0.45 Score=43.95 Aligned_cols=34 Identities=12% Similarity=0.157 Sum_probs=30.7
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|.|||+|..|...|..|++. |.+|+++++.+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~--g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM--GHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhC--CCEEEEEeCCH
Confidence 35799999999999999999998 88999999863
No 394
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.23 E-value=0.45 Score=43.95 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=30.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC--eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM--KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~ 91 (473)
...|.|||.|..|.+.|..|++. |. +|+++++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECC
Confidence 35799999999999999999999 77 99999986
No 395
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.19 E-value=0.34 Score=46.46 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=30.4
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|+|||+|.+|+.+|..|... |.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCH
Confidence 35799999999999999999988 89999999863
No 396
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.18 E-value=0.35 Score=45.65 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=29.9
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..|+|+|+|.+|+.++..|+.. |.+|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL--GAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCC
Confidence 5799999999999999999999 8899999986
No 397
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=89.17 E-value=0.52 Score=43.59 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=29.8
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC--eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM--KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~ 91 (473)
..+|.|||+|..|.++|+.|+.. |. +|+++|..
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~--g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK--DLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH--CCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECC
Confidence 46899999999999999999998 66 89999975
No 398
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=89.17 E-value=0.41 Score=44.42 Aligned_cols=36 Identities=28% Similarity=0.312 Sum_probs=29.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+.+|+|||+|-+|.++|+.|+..+-...++++|..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 457899999999999999999988222389999975
No 399
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=89.13 E-value=0.14 Score=44.85 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=30.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..+|.|||.|..|.+.|..|+++ |.+|+.+++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~--G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSV--GHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHT--TCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHC--CCEEEEecCH
Confidence 45799999999999999999999 8999999874
No 400
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=89.12 E-value=0.38 Score=47.57 Aligned_cols=37 Identities=16% Similarity=0.226 Sum_probs=31.3
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCC-CCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYP-KMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~-G~~V~viE~~~~~ 94 (473)
.+++|||+|.+|+.+|..|++..+ |.+|+++++.+.+
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 479999999999999999988632 6899999998643
No 401
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.09 E-value=0.39 Score=44.60 Aligned_cols=34 Identities=12% Similarity=0.088 Sum_probs=29.9
Q ss_pred cccEEEEcCChHHHH-HHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVA-TARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~-~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|.|||.|.+|++ +|..|.++ |.+|++.|+..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~--G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA--GFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC--CCEEEEEcCCC
Confidence 346999999999997 78889999 99999999863
No 402
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.09 E-value=0.4 Score=43.36 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=30.5
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|+|.|+|..|..++..|.++ |.+|+++.|.+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQ--GWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGG--TCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHC--CCEEEEEEcCh
Confidence 5799999999999999999999 89999999863
No 403
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.08 E-value=0.35 Score=44.24 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=30.1
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..+|.|||+|..|...|..|++. |.+|+++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~ 36 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE--GVTVYAFDLM 36 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT--TCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCC
Confidence 35799999999999999999998 8999999986
No 404
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.07 E-value=0.39 Score=44.45 Aligned_cols=33 Identities=12% Similarity=0.106 Sum_probs=30.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCC-CeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPK-MKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G-~~V~viE~~~ 92 (473)
..|.|||.|..|...|..|++. | .+|+++++.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~--G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR--NAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHc--CCCeEEEEeCCC
Confidence 5699999999999999999999 8 9999999873
No 405
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=89.00 E-value=0.34 Score=44.73 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=30.1
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
...|.|||.|..|...|..|++. |. +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~--G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA--GAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH--SCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCCeEEEEcCC
Confidence 46799999999999999999999 88 99999985
No 406
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=88.99 E-value=0.38 Score=44.14 Aligned_cols=34 Identities=24% Similarity=0.559 Sum_probs=29.9
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC--eEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM--KICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~~ 92 (473)
..+|.|||+|..|..+|+.|+.+ |. +|+++|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~--g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK--GIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEcCCc
Confidence 35799999999999999999998 66 999999873
No 407
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=88.94 E-value=0.4 Score=42.99 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=30.8
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...++|||+|-+|.++|+.|++. |.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~--G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ--GLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 45799999999999999999999 89999999873
No 408
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=88.76 E-value=0.52 Score=43.89 Aligned_cols=37 Identities=30% Similarity=0.469 Sum_probs=30.9
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
..||.+|||+|.+|.++|..++...++.++.+++...
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 3589999999999999999998655677888887664
No 409
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=88.75 E-value=0.4 Score=47.02 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=31.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccCcc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEKEL 94 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~~~ 94 (473)
.+++|||+|.+|+.+|..|++. |.+|+++++.+.+
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~--g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGL--GVKTTLIYRGKEI 205 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCeEEEEEcCCcc
Confidence 4799999999999999999999 8999999998543
No 410
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=88.73 E-value=0.49 Score=44.53 Aligned_cols=35 Identities=23% Similarity=0.439 Sum_probs=29.3
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
+++|.+|||+|++|+++|..++.. +.++.++++..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~--G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARK--GYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC--CCEEEEEeccC
Confidence 468999999999999999999854 56787887654
No 411
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=88.66 E-value=0.4 Score=42.88 Aligned_cols=31 Identities=26% Similarity=0.432 Sum_probs=28.9
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCC-CeEEEEecc
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPK-MKICLVEKE 91 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G-~~V~viE~~ 91 (473)
.|.|||+|..|...|..|++. | .+|+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ--GGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH--CSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHC--CCCeEEEECCC
Confidence 589999999999999999999 8 899999986
No 412
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=88.56 E-value=0.35 Score=46.46 Aligned_cols=36 Identities=36% Similarity=0.484 Sum_probs=31.2
Q ss_pred CCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 9 LYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 9 ~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
++|.+|||+|++|+++|..|+...|+.++.++++..
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 489999999999999999999776778888887653
No 413
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.56 E-value=0.27 Score=46.49 Aligned_cols=31 Identities=29% Similarity=0.432 Sum_probs=29.4
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
+|.|||+|..|.+.|..|++. |.+|+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~--G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK--CREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT--EEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhC--CCEEEEEECC
Confidence 799999999999999999998 8999999986
No 414
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=88.54 E-value=0.48 Score=46.48 Aligned_cols=40 Identities=30% Similarity=0.545 Sum_probs=33.2
Q ss_pred CCCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccccc
Q psy7710 7 PTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEKEF 46 (473)
Q Consensus 7 ~~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~~~ 46 (473)
++++|.+|||+|++|.++|..|....|+.++.++++.+..
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 3578999999999999999999977655788888876543
No 415
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.48 E-value=0.43 Score=43.08 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=28.8
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.|.|||+|..|.+.|..|++. |.+|+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHC--CCEEEEEECC
Confidence 589999999999999999998 8899999886
No 416
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=88.48 E-value=0.48 Score=43.85 Aligned_cols=34 Identities=18% Similarity=0.351 Sum_probs=30.1
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~~ 92 (473)
..+|.|||+|..|.++|+.|+.. +. +|+++|..+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~--~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK--QLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCh
Confidence 35799999999999999999998 66 999999863
No 417
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=88.38 E-value=0.42 Score=44.01 Aligned_cols=32 Identities=25% Similarity=0.486 Sum_probs=28.8
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCC--eEEEEeccC
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKM--KICLVEKEK 92 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~~ 92 (473)
+|.|||+|..|.++|+.|+.. +. +|+++|..+
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ--DVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH--TCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCch
Confidence 599999999999999999998 65 899999863
No 418
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.37 E-value=0.48 Score=43.77 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=29.3
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..+|+|||+|-+|.++|+.|+..+....|.++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 46899999999999999999988211489999875
No 419
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=88.35 E-value=0.56 Score=43.49 Aligned_cols=34 Identities=29% Similarity=0.475 Sum_probs=30.1
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCC--eEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKM--KICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~ 91 (473)
...+|.|||+|..|.++|+.|+.+ |. +++++|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMK--DLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEeCC
Confidence 456899999999999999999998 65 89999975
No 420
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.31 E-value=0.44 Score=45.17 Aligned_cols=32 Identities=25% Similarity=0.426 Sum_probs=29.9
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..|+|+|+|.+|..+|..|+.. |.+|+++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM--GAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEECC
Confidence 5799999999999999999999 8999999986
No 421
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.26 E-value=0.42 Score=45.52 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=30.4
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|+|||+|.+|+.+|..+... |.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 45799999999999999999988 88999999863
No 422
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=88.26 E-value=0.28 Score=42.71 Aligned_cols=32 Identities=16% Similarity=0.356 Sum_probs=29.2
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEE-Eecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICL-VEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~v-iE~~ 91 (473)
.+|.|||+|..|.+.|..|++. |.+|++ +++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~--g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA--QIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT--TCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCC
Confidence 5799999999999999999999 889998 7776
No 423
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.18 E-value=0.61 Score=42.31 Aligned_cols=32 Identities=19% Similarity=0.391 Sum_probs=29.9
Q ss_pred ccEEEEcC-ChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGG-GIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGa-Gi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..|.|||+ |..|...|..|++. |.+|+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS--AHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECC
Confidence 47999999 99999999999999 8999999986
No 424
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=88.17 E-value=0.56 Score=45.43 Aligned_cols=37 Identities=19% Similarity=0.296 Sum_probs=30.1
Q ss_pred CCCCcEEEEccChHHHHHHHHHhhhCCCC-cEEEEecccc
Q psy7710 7 PTLYDMVVVGGGIVGVATARELKLKYPKM-KTCLVEKEKE 45 (473)
Q Consensus 7 ~~~~~~~vvg~g~ag~~~a~~l~~~~~~~-~~~~~~~~~~ 45 (473)
.+.+|.+|||+|++|+++|..|+.. +. ++.++++...
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~--G~~~V~vlE~~~~ 41 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARR--GYTNVTVLDPYPV 41 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSCS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHc--CCCcEEEEeCCCC
Confidence 3568999999999999999999865 45 6778877654
No 425
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=88.00 E-value=0.53 Score=40.69 Aligned_cols=31 Identities=23% Similarity=0.394 Sum_probs=29.0
Q ss_pred cEEEEcC-ChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 59 DVVVVGG-GIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 59 dVvIIGa-Gi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.|+|.|| |..|..++..|+++ |.+|+++.|.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRR--GHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEec
Confidence 4999998 99999999999999 8999999986
No 426
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=87.99 E-value=0.45 Score=43.22 Aligned_cols=35 Identities=31% Similarity=0.312 Sum_probs=30.7
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
....|+|||+|-.|..+|..|+..+- -+++|+|.+
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGV-G~i~lvD~D 69 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGI-GKLLLFDYD 69 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 35689999999999999999999942 489999987
No 427
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=87.91 E-value=0.53 Score=43.51 Aligned_cols=36 Identities=25% Similarity=0.266 Sum_probs=29.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
++.+|+|||+|-+|.++|+.|+..+....++++|..
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 446899999999999999999988222389999975
No 428
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=87.90 E-value=0.54 Score=43.84 Aligned_cols=34 Identities=18% Similarity=0.332 Sum_probs=30.8
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|.|||.|..|.+.|..|++. |.+|+++++.+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA--NHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 35699999999999999999999 89999999863
No 429
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=87.89 E-value=0.52 Score=43.09 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=29.9
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
...++|||+|.+|.++|+.|++. |. +|+|+.|.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~--G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST--AAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT--TCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHC--CCCEEEEEeCC
Confidence 35699999999999999999999 86 99999986
No 430
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.83 E-value=0.55 Score=40.41 Aligned_cols=31 Identities=16% Similarity=0.318 Sum_probs=28.8
Q ss_pred cEEEEcC-ChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 59 DVVVVGG-GIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 59 dVvIIGa-Gi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.|+|+|| |..|..++..|+++ |.+|+++.|.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR--GHEVTAIVRN 33 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred eEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcC
Confidence 4999996 99999999999999 8999999987
No 431
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=87.80 E-value=0.46 Score=44.05 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=29.8
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCC----CeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPK----MKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G----~~V~viE~~ 91 (473)
..+|.|||+|..|.+.|..|++. | .+|+++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~--G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA--GVLAAHKIMASSPD 58 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT--TSSCGGGEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCCCcceEEEECCC
Confidence 35799999999999999999998 7 789999986
No 432
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=87.77 E-value=0.55 Score=42.46 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=30.3
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|+|.|+|..|..++..|.++ |.+|+++.|..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ--GHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCc
Confidence 4699999999999999999999 89999999873
No 433
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=87.74 E-value=0.33 Score=48.19 Aligned_cols=39 Identities=21% Similarity=0.271 Sum_probs=31.4
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEecccccc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEKEFF 47 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~~~~ 47 (473)
+.+|++|||+|++|.++|..|+.. .+..+.++|..+...
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~-~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQI-DGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHH-CCSCEEEEESSSSCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhh-CCCCEEEEECCCCCc
Confidence 458999999999999999999853 356788888776654
No 434
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=87.67 E-value=0.44 Score=45.95 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=30.5
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.+..|||.|..|+.+|..|+++ |.+|+++|+++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~--G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH--GVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHC--CCEEEEEECCH
Confidence 4689999999999999999999 99999999874
No 435
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=87.64 E-value=0.53 Score=46.11 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=31.3
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEeccCc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKEKE 93 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~~~ 93 (473)
..+|.|||+|..|+.+|..|+++ +|. +|+++|+.+.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~-~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA-PCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS-TTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHh-CCCCeEEEEECChh
Confidence 35799999999999999999987 357 9999998753
No 436
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=87.63 E-value=0.52 Score=41.91 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=29.8
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
...|+|||+|-.|..+|..|+.. |. +++|+|.+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~--Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA--GVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT--TCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHc--CCCeEEEEeCC
Confidence 46799999999999999999999 64 89999987
No 437
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=87.55 E-value=0.43 Score=43.04 Aligned_cols=33 Identities=18% Similarity=0.222 Sum_probs=30.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
...++|+|+|-+|.++|+.|++. |.+|+|+.|.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~--G~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQA--QQNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHT--TCEEEEEESS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCEEEEEECC
Confidence 35699999999999999999999 8999999986
No 438
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=87.50 E-value=0.54 Score=44.07 Aligned_cols=35 Identities=34% Similarity=0.511 Sum_probs=29.7
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
++||.+|||+|++|+++|..++.. +.++.++++.+
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~--G~~V~vlE~~~ 37 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAG--GHEVLVAEAAE 37 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCC
Confidence 358999999999999999999853 67888888764
No 439
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=87.49 E-value=0.4 Score=46.03 Aligned_cols=30 Identities=17% Similarity=0.220 Sum_probs=27.7
Q ss_pred ccEEEEcCChHHHHHHHHHHh-cCCCCeEEEEe
Q psy7710 58 YDVVVVGGGIVGVATARELKL-NYPKMKICLVE 89 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~-~~~G~~V~viE 89 (473)
++|.|||+|..|.+.|..|++ . |.+|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~--G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRD--GVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTST--TEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCC--CCEEEEEe
Confidence 469999999999999999987 6 88999999
No 440
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.48 E-value=0.53 Score=44.73 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=30.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
...|+|||+|.+|..+|..++.. |.+|+++++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM--GATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCC
Confidence 45799999999999999999988 8999999986
No 441
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.46 E-value=0.43 Score=49.54 Aligned_cols=33 Identities=30% Similarity=0.557 Sum_probs=30.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|.|||+|..|...|..|+++ |.+|+++|+.+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a--G~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS--NYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhC--CCEEEEEECCH
Confidence 4699999999999999999999 99999999873
No 442
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=87.40 E-value=0.68 Score=40.49 Aligned_cols=34 Identities=29% Similarity=0.487 Sum_probs=27.7
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEecc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKE 43 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~ 43 (473)
+.||.+|||+|.+|+.+|..++.. +.++.++++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~--g~~v~lie~~ 35 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQK--GVRVGLLTQS 35 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEecC
Confidence 468999999999999999999854 5567677655
No 443
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=87.39 E-value=0.55 Score=44.98 Aligned_cols=36 Identities=28% Similarity=0.372 Sum_probs=29.2
Q ss_pred CCCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 7 PTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 7 ~~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
.+.||.+|||+|++|.++|..|+.. +.++.++++.+
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS--GIDCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence 5669999999999999999999854 56787887764
No 444
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=87.30 E-value=0.51 Score=46.42 Aligned_cols=33 Identities=15% Similarity=0.274 Sum_probs=30.6
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
+.+|.|||.|..|...|..|+++ |.+|+++++.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~--G~~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR--GYTVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT--TCCEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhC--CCeEEEEeCC
Confidence 45799999999999999999999 8999999986
No 445
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.29 E-value=0.56 Score=45.99 Aligned_cols=34 Identities=12% Similarity=0.322 Sum_probs=31.3
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..+|.|||.|..|...|..|++. |.+|+++++.+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~--G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 46799999999999999999999 89999999874
No 446
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.24 E-value=0.64 Score=40.64 Aligned_cols=34 Identities=26% Similarity=0.235 Sum_probs=30.7
Q ss_pred cccEEEEcC-ChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGG-GIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGa-Gi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|+|.|| |..|..++.+|+++ |.+|+++.|..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhC--CCeEEEEECCh
Confidence 457999998 99999999999999 89999999873
No 447
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=87.24 E-value=0.57 Score=46.23 Aligned_cols=34 Identities=12% Similarity=0.241 Sum_probs=31.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|.|||.|..|...|..|+++ |.+|+++++.+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~--G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH--GFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 45799999999999999999999 89999999864
No 448
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=87.22 E-value=0.65 Score=42.20 Aligned_cols=34 Identities=24% Similarity=0.403 Sum_probs=29.9
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..|.|||+|..|.+.|..|++.+++.+|+++++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 4699999999999999999988545799999876
No 449
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.22 E-value=0.6 Score=42.20 Aligned_cols=31 Identities=29% Similarity=0.458 Sum_probs=28.5
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCC--eEEEEecc
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKM--KICLVEKE 91 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~--~V~viE~~ 91 (473)
.|.|||+|..|.+.|..|++. |. +|+++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~--g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhc--CCCcEEEEEeCC
Confidence 599999999999999999998 77 89999886
No 450
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=87.21 E-value=0.63 Score=44.04 Aligned_cols=34 Identities=41% Similarity=0.674 Sum_probs=28.8
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEecc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKE 43 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~ 43 (473)
.++|.+|||+|++|+++|..++.. +.++.++++.
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~--G~~V~lle~~ 37 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKR--GEEVTVIEKR 37 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC--CCeEEEEeCC
Confidence 468999999999999999999864 5678788765
No 451
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=87.21 E-value=0.58 Score=43.62 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=29.2
Q ss_pred cccEEEEcC-ChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGG-GIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGa-Gi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..+|+|||+ |..|.++|+.++.++...+|+++|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 457999997 99999999999998212489999975
No 452
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.15 E-value=0.38 Score=45.23 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=30.3
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCC-------CeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPK-------MKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G-------~~V~viE~~~ 92 (473)
.+|.|||+|..|.+.|..|++. | .+|+++++.+
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~--g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN--AAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HHHCTTEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCcccCCCCeEEEEEcCh
Confidence 4799999999999999999998 8 8999999874
No 453
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.12 E-value=0.53 Score=43.09 Aligned_cols=33 Identities=30% Similarity=0.478 Sum_probs=30.1
Q ss_pred ccEEEEc-CChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVG-GGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIG-aGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|.||| .|..|.+.|..|++. |.+|+++++.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS--GYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCc
Confidence 4699999 999999999999999 88999999863
No 454
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=87.09 E-value=0.62 Score=43.16 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=30.0
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
...|+|||+|-.|..+|..|+..|- -+++|+|.+
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGV-g~ItlvD~D 67 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNG 67 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEecCC
Confidence 5679999999999999999999942 489999987
No 455
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=87.08 E-value=0.37 Score=47.13 Aligned_cols=39 Identities=28% Similarity=0.432 Sum_probs=31.1
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhC----CCCcEEEEeccccc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKY----PKMKTCLVEKEKEF 46 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~----~~~~~~~~~~~~~~ 46 (473)
+++|.+|||+|++|.++|..|.... |+.++.++++.+..
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 4689999999999999999998654 44778888876543
No 456
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.07 E-value=0.43 Score=45.34 Aligned_cols=33 Identities=12% Similarity=0.261 Sum_probs=30.1
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCC-------CeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPK-------MKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G-------~~V~viE~~~ 92 (473)
.+|.|||+|..|.+.|..|++. | .+|+++++.+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~--G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN--AKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH--HHHCTTBCSCEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHHc--CCccCCCCCeEEEEECCh
Confidence 4699999999999999999998 7 8999999864
No 457
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=87.01 E-value=0.61 Score=49.29 Aligned_cols=42 Identities=17% Similarity=0.169 Sum_probs=35.6
Q ss_pred CcEEEeCceEEEEEEcCCeEEEEcCC------CcEEEcCEEEEcCCcC
Q psy7710 218 GGEIRLNQQVESFKENPESVTISTKQ------GDHLESSYALVCAGLQ 259 (473)
Q Consensus 218 Gv~i~~~~~V~~i~~~~~~v~v~~~~------g~~i~ad~VV~aaG~~ 259 (473)
+++|+++++|++|..++++|.|++.+ +.+++||+||+|....
T Consensus 581 ~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~ 628 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLG 628 (852)
T ss_dssp TCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHH
T ss_pred CCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHH
Confidence 56899999999999998888887654 4579999999999654
No 458
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=86.95 E-value=0.54 Score=42.90 Aligned_cols=32 Identities=19% Similarity=0.371 Sum_probs=29.7
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+|.|||+|..|...|..|++. |.+|+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC--CCEEEEEeCC
Confidence 4799999999999999999998 8999999986
No 459
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=86.90 E-value=0.7 Score=42.05 Aligned_cols=33 Identities=30% Similarity=0.525 Sum_probs=29.8
Q ss_pred ccEEEEcC-ChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGG-GIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGa-Gi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
++|+|.|| |.+|..++.+|.++ |.+|+++-|.+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCC
Confidence 35999998 99999999999999 99999998864
No 460
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=86.89 E-value=0.64 Score=43.81 Aligned_cols=33 Identities=33% Similarity=0.471 Sum_probs=30.1
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|+|||||..|..+|+.+.+. |++|+++|.++
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~--G~~vv~vd~~~ 34 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKA--GMKVVLVDKNP 34 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCT
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCC
Confidence 3599999999999999999999 99999999864
No 461
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.85 E-value=0.58 Score=45.71 Aligned_cols=33 Identities=27% Similarity=0.288 Sum_probs=30.4
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
...|+|||+|-+|...|..|.+. |.+|+|+++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~--ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEA--GARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--cCEEEEEcCC
Confidence 35699999999999999999999 9999999975
No 462
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.84 E-value=0.54 Score=40.75 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=30.0
Q ss_pred ccEEEEcC-ChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGG-GIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGa-Gi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
..|+|.|| |..|..++..|.++ |.+|+++.|.+
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCc
Confidence 56999995 99999999999999 89999999973
No 463
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=86.82 E-value=0.58 Score=42.22 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=29.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..|+|||+|.+|.++|..|.+. |.+|+++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~--g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE--GAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHc--CCEEEEEECC
Confidence 5699999999999999999999 7899999986
No 464
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=86.81 E-value=0.56 Score=46.47 Aligned_cols=35 Identities=26% Similarity=0.508 Sum_probs=29.3
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
++||.+|||+|++|+++|..++.. +.++.++++..
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~--G~~V~llE~~~ 36 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGR--GLSVLMLEAQD 36 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC--CCCEEEEECCC
Confidence 468999999999999999999864 57788888764
No 465
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=86.73 E-value=0.58 Score=41.76 Aligned_cols=33 Identities=18% Similarity=0.194 Sum_probs=29.9
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCC----CeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPK----MKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G----~~V~viE~~~ 92 (473)
.+|.|||+|..|.+.|..|++. | .+|+++++.+
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~--g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA--NIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH--TSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCCCCCeEEEEeCCc
Confidence 4699999999999999999998 7 6899999874
No 466
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=86.71 E-value=0.66 Score=41.26 Aligned_cols=31 Identities=32% Similarity=0.338 Sum_probs=29.1
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
.++|||+|-+|.++++.|.+. |. +|+|++|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~--G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM--GVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHc--CCCEEEEEeCC
Confidence 799999999999999999999 77 89999986
No 467
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=86.71 E-value=0.78 Score=44.77 Aligned_cols=38 Identities=26% Similarity=0.449 Sum_probs=30.5
Q ss_pred CCCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccccc
Q psy7710 7 PTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEKEF 46 (473)
Q Consensus 7 ~~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~~~ 46 (473)
...||.+|||+|++|.++|..|+.. +.++.++++.+..
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~--G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVD--GKKVLHIDKQDHY 46 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred cccCCEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCCCC
Confidence 3569999999999999999999854 5678788766543
No 468
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=86.68 E-value=0.55 Score=42.77 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=29.4
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
+|.|||+|..|...|..|++. |.+|+++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~--g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH--GYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT--TCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHC--CCEEEEEeCCH
Confidence 589999999999999999998 88999999863
No 469
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=86.66 E-value=0.6 Score=45.91 Aligned_cols=32 Identities=28% Similarity=0.461 Sum_probs=29.7
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
++|.|||+|..|...|..|+++ |.+|+++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~--G~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK--GFKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCEEEEEeCC
Confidence 3699999999999999999999 8999999986
No 470
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=86.63 E-value=0.71 Score=42.74 Aligned_cols=34 Identities=24% Similarity=0.482 Sum_probs=28.2
Q ss_pred CCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 9 LYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 9 ~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
++|.+|||+|++|.++|..|... +.++.++++.+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~--G~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHC--CCcEEEEECCC
Confidence 47999999999999999999854 56777777654
No 471
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=86.62 E-value=0.58 Score=42.98 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=30.2
Q ss_pred CcccEEEEcCC-hHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGG-IVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaG-i~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
....++|||+| +.|..+|..|... |.+|+++++.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~--gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLAND--GATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTT--SCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHC--CCEEEEEeCc
Confidence 34689999999 6799999999999 8999999886
No 472
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.62 E-value=0.68 Score=40.94 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=29.4
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCC----eEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKM----KICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~----~V~viE~~ 91 (473)
..|.|||+|..|.+.|..|.+. |. +|+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~--g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK--NIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhC--CCCCCCeEEEEeCC
Confidence 4699999999999999999999 87 99999986
No 473
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=86.58 E-value=0.74 Score=42.34 Aligned_cols=33 Identities=15% Similarity=0.286 Sum_probs=29.9
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
...++|+|+|-+|.++|+.|++. |. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~--Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALD--GVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT--TCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHC--CCCEEEEEECC
Confidence 45799999999999999999999 87 89999886
No 474
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=86.41 E-value=0.6 Score=42.33 Aligned_cols=37 Identities=30% Similarity=0.539 Sum_probs=30.1
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEecccc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEKE 45 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~~ 45 (473)
.+||.+|||+|.+|.++|..++. .++.++.++++.+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~-~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISK-NPNVQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHT-STTSCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHH-cCCCeEEEEECCCC
Confidence 45899999999999999999984 34678888887643
No 475
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=86.37 E-value=0.36 Score=42.38 Aligned_cols=33 Identities=27% Similarity=0.331 Sum_probs=29.4
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|+|+|+|-.|..+|..|.+. |. |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~--g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS--EV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS--EE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhC--Ce-EEEEECCH
Confidence 45699999999999999999998 88 99999874
No 476
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=86.34 E-value=0.52 Score=45.51 Aligned_cols=46 Identities=22% Similarity=0.377 Sum_probs=39.7
Q ss_pred HHHHcCcEEEeCceEEEEEEcCCeEEEEcCCCcEEEcCEEEEcCCcC
Q psy7710 213 EFCELGGEIRLNQQVESFKENPESVTISTKQGDHLESSYALVCAGLQ 259 (473)
Q Consensus 213 ~~~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ad~VV~aaG~~ 259 (473)
.+++.| +|+++++|++|..+++++.|++.+|.+++||+||+|+|..
T Consensus 213 ~~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 213 MSQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred HHhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 344567 9999999999998888899999888679999999999954
No 477
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=86.29 E-value=0.54 Score=42.43 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=30.3
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~~ 92 (473)
...++|||+|-+|.++|+.|++. |. +|+|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI--VRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT--CCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCH
Confidence 35799999999999999999999 87 899999873
No 478
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=86.28 E-value=0.78 Score=41.53 Aligned_cols=33 Identities=36% Similarity=0.424 Sum_probs=29.7
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
...++|+|+|-+|.++|+.|++. |. +|+|+.|.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~--G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTH--GVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCCEEEEEECC
Confidence 45799999999999999999999 87 79999886
No 479
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=86.25 E-value=0.64 Score=45.76 Aligned_cols=33 Identities=12% Similarity=0.348 Sum_probs=30.3
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
.+|.|||.|..|...|..|++. |.+|+++++.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~--G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHC--CCeEEEEeCCH
Confidence 4699999999999999999999 89999999863
No 480
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.25 E-value=0.88 Score=40.61 Aligned_cols=33 Identities=24% Similarity=0.282 Sum_probs=29.3
Q ss_pred cccEEEEcC-C-hHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGG-G-IVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGa-G-i~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
...++|.|| | -.|..+|.+|+++ |.+|+++++.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~ 56 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYH 56 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESC
T ss_pred CCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCC
Confidence 346999998 7 5999999999999 9999999986
No 481
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=86.23 E-value=0.66 Score=41.34 Aligned_cols=32 Identities=16% Similarity=0.278 Sum_probs=29.4
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
.+|.|||+|..|...|..|++. |.+|.++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~--g~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQT--PHELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTS--SCEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhC--CCeEEEECCC
Confidence 4799999999999999999998 7899999986
No 482
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=86.16 E-value=0.67 Score=45.16 Aligned_cols=33 Identities=30% Similarity=0.277 Sum_probs=30.2
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
...++|+|+|.+|..+|..|+.. |.+|+++|+.
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~--GA~Viv~D~~ 297 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQA--GARVIVTEID 297 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCC
Confidence 35699999999999999999999 9999999986
No 483
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.14 E-value=0.64 Score=42.23 Aligned_cols=31 Identities=26% Similarity=0.391 Sum_probs=28.6
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
..++|+|+|.+|.++|+.|++. | +|++++|.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~--G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD--N-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS--S-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHC--C-CEEEEECC
Confidence 4699999999999999999999 8 99999886
No 484
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=86.13 E-value=0.73 Score=44.42 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=27.7
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
.+||.+|||+|++|.++|..++.. +.++.++++.+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~--G~~V~llEk~~ 60 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKR--GRRVLVIDHAR 60 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 458999999999999999998854 56777777654
No 485
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=86.07 E-value=0.68 Score=43.30 Aligned_cols=35 Identities=23% Similarity=0.464 Sum_probs=29.2
Q ss_pred CcEEEEccChHHHHHHHHHhhhC----CCCcEEEEeccc
Q psy7710 10 YDMVVVGGGIVGVATARELKLKY----PKMKTCLVEKEK 44 (473)
Q Consensus 10 ~~~~vvg~g~ag~~~a~~l~~~~----~~~~~~~~~~~~ 44 (473)
+|++|||+|++|+++|..|+... |+.++.++++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999998664 557888888764
No 486
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=86.05 E-value=0.77 Score=41.49 Aligned_cols=33 Identities=30% Similarity=0.242 Sum_probs=29.9
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCC-eEEEEecc
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKM-KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~-~V~viE~~ 91 (473)
...++|+|+|-+|.++|+.|++. |. +|+|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~--G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDN--FAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHT--TCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHc--CCCEEEEEeCC
Confidence 45799999999999999999999 77 89999886
No 487
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=86.03 E-value=0.86 Score=45.75 Aligned_cols=37 Identities=22% Similarity=0.351 Sum_probs=30.7
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhC-CCCcEEEEeccc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKY-PKMKTCLVEKEK 44 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~-~~~~~~~~~~~~ 44 (473)
..+|++|||+|++|.++|..|+... .+.++.+++++.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4689999999999999999998644 577888888653
No 488
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=86.02 E-value=0.59 Score=44.24 Aligned_cols=36 Identities=39% Similarity=0.577 Sum_probs=29.7
Q ss_pred CCCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 7 PTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 7 ~~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
..++|.+|||+|++|+++|..++.. +.++.++++..
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~--G~~V~llE~~~ 50 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKE--NKNTALFESGT 50 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC--CCcEEEEeCCC
Confidence 4569999999999999999999854 56787887653
No 489
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=86.02 E-value=0.75 Score=41.84 Aligned_cols=33 Identities=33% Similarity=0.370 Sum_probs=28.0
Q ss_pred cEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 59 DVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 59 dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
+|.|||+|-.|.++|+.|..++.--+++++|..
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~ 34 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 699999999999999999887322479999976
No 490
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.00 E-value=0.81 Score=41.86 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=30.8
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
....|.|||+|.+|..+|..|... |.+|+++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~ 189 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL--GANVKVGARS 189 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC--CCEEEEEECC
Confidence 345799999999999999999988 8999999986
No 491
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=85.95 E-value=1 Score=38.78 Aligned_cols=31 Identities=19% Similarity=0.377 Sum_probs=28.2
Q ss_pred cEEEEcC-ChHHHHHHHHHH-hcCCCCeEEEEecc
Q psy7710 59 DVVVVGG-GIVGVATARELK-LNYPKMKICLVEKE 91 (473)
Q Consensus 59 dVvIIGa-Gi~Gl~~A~~L~-~~~~G~~V~viE~~ 91 (473)
.|+|.|| |..|..+|..|+ +. |.+|+++.|.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~ 39 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYT--DMHITLYGRQ 39 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESS
T ss_pred EEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecC
Confidence 3999995 999999999999 78 8999999986
No 492
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=85.89 E-value=0.78 Score=46.17 Aligned_cols=36 Identities=33% Similarity=0.614 Sum_probs=30.5
Q ss_pred CCCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 7 PTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 7 ~~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
...||.+|||+|++|+++|..++.. +.++.++++.+
T Consensus 16 ~~~~DVvVIGgGi~Gl~~A~~La~~--G~~V~LlEk~d 51 (561)
T 3da1_A 16 EKQLDLLVIGGGITGAGIALDAQVR--GIQTGLVEMND 51 (561)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHTT--TCCEEEEESSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhC--CCcEEEEECCC
Confidence 3569999999999999999999854 67888888773
No 493
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=85.88 E-value=0.76 Score=44.29 Aligned_cols=34 Identities=12% Similarity=0.329 Sum_probs=29.6
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...+|.|||.|..|+..|..|++ |.+|+++|+.+
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~---G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ---NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT---TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc---CCeEEEEecCH
Confidence 34689999999999999999885 68999999873
No 494
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=85.86 E-value=0.61 Score=43.30 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=28.8
Q ss_pred cccEEEEcC-ChHHHHHHHHHHhcCCCC-------eEEEEecc
Q psy7710 57 LYDVVVVGG-GIVGVATARELKLNYPKM-------KICLVEKE 91 (473)
Q Consensus 57 ~~dVvIIGa-Gi~Gl~~A~~L~~~~~G~-------~V~viE~~ 91 (473)
..+|+|+|| |..|.+++..|.++ |. +|+++|+.
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~--g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCCCCCCCCEEEEEeCC
Confidence 357999997 99999999999988 64 89999875
No 495
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=85.80 E-value=0.42 Score=45.48 Aligned_cols=35 Identities=40% Similarity=0.563 Sum_probs=29.6
Q ss_pred CCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEeccc
Q psy7710 8 TLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEK 44 (473)
Q Consensus 8 ~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~ 44 (473)
++||.+|||+|++|.++|..++.. +.++.++++..
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~--G~~V~l~E~~~ 37 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKY--GLKTLMIEKRP 37 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence 468999999999999999999854 56788887765
No 496
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=85.75 E-value=0.82 Score=41.34 Aligned_cols=33 Identities=21% Similarity=0.456 Sum_probs=29.9
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCC---eEEEEeccC
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKM---KICLVEKEK 92 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~---~V~viE~~~ 92 (473)
..|.|||+|..|.+.|..|++. |. +|+++++.+
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~--g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN--GYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT--TCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHC--CCCCCeEEEEeCCH
Confidence 5699999999999999999998 77 899999873
No 497
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.71 E-value=0.86 Score=41.52 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=30.7
Q ss_pred CcccEEEEcCChHHHHHHHHHHhcCCCCeEEEEecc
Q psy7710 56 ALYDVVVVGGGIVGVATARELKLNYPKMKICLVEKE 91 (473)
Q Consensus 56 ~~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~ 91 (473)
....|.|||+|.+|..+|..|... |.+|+++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~ 187 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL--GAKVKVGARE 187 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECC
Confidence 345799999999999999999988 8999999986
No 498
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=85.67 E-value=0.72 Score=41.28 Aligned_cols=32 Identities=16% Similarity=0.349 Sum_probs=29.2
Q ss_pred ccEEEEcCChHHHHHHHHHHhcCCCCe-EEEEecc
Q psy7710 58 YDVVVVGGGIVGVATARELKLNYPKMK-ICLVEKE 91 (473)
Q Consensus 58 ~dVvIIGaGi~Gl~~A~~L~~~~~G~~-V~viE~~ 91 (473)
..|.|||+|..|...|..|++. |.+ |.++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCC
Confidence 5799999999999999999999 888 8899886
No 499
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=85.61 E-value=0.52 Score=48.88 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=30.9
Q ss_pred cccEEEEcCChHHHHHHHHHHhcCCCCeEEEEeccC
Q psy7710 57 LYDVVVVGGGIVGVATARELKLNYPKMKICLVEKEK 92 (473)
Q Consensus 57 ~~dVvIIGaGi~Gl~~A~~L~~~~~G~~V~viE~~~ 92 (473)
...|.|||+|..|...|..|+++ |.+|+++|+.+
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a--G~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK--GTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT--TCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhC--CCEEEEEECCH
Confidence 34699999999999999999999 99999999873
No 500
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=85.60 E-value=0.89 Score=44.99 Aligned_cols=40 Identities=28% Similarity=0.416 Sum_probs=32.1
Q ss_pred CCCCCCCcEEEEccChHHHHHHHHHhhhCCCCcEEEEecccc
Q psy7710 4 SQSPTLYDMVVVGGGIVGVATARELKLKYPKMKTCLVEKEKE 45 (473)
Q Consensus 4 ~~~~~~~~~~vvg~g~ag~~~a~~l~~~~~~~~~~~~~~~~~ 45 (473)
+...+++|.+|||+|++|.++|..|+.. +.++.++++.+.
T Consensus 6 ~~~~~~~dVlIVGaGpaGl~~A~~La~~--G~~v~vlE~~~~ 45 (500)
T 2qa1_A 6 HHHRSDAAVIVVGAGPAGMMLAGELRLA--GVEVVVLERLVE 45 (500)
T ss_dssp --CCSBCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCCC
T ss_pred CCccCCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 4457889999999999999999999854 677888887653
Done!