BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7711
(577 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0IIF7|UBP14_BOVIN Ubiquitin carboxyl-terminal hydrolase 14 OS=Bos taurus GN=USP14
PE=2 SV=3
Length = 494
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/400 (51%), Positives = 263/400 (65%), Gaps = 46/400 (11%)
Query: 189 LPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSN--PAQSITASLRDLYEC 246
LP GL NLGNTCYMNA +QC+++VPEL+ ALK G L+ AQ ITA+LRDL++
Sbjct: 103 LPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDS 162
Query: 247 MDNMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPG--- 303
MD K S SI P I+LQ LH FP+FA+K + G Y+QQDANECW +M+R+L+ L
Sbjct: 163 MD--KTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWVQMMRVLQQKLEAIED 220
Query: 304 ----ENEEGQDSA-----KSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYIT 354
E + SA K S I+Q+F +T +KC+ESE E TKG ES QLSC+I
Sbjct: 221 DTVKETDSSSASAVTPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKESQLQLSCFIN 280
Query: 355 TDVKYMLPGLKNKLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERIN 414
+VKY+ GLK +LQ++ITK+SP+L R+A+Y+K+SK+SRLPAYLTIQ VRFFYKEKE +N
Sbjct: 281 QEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVN 340
Query: 415 AKVLKDIKFPIEFDAYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEI 474
AKVLKD+KFP+ D YELCTPELQ K+ R KFK E+K+ ++ +T
Sbjct: 341 AKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVNQQPKT------------ 388
Query: 475 YVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRT 534
G K +P + VK F DIGSNN GYY LQAVLTH+GR+
Sbjct: 389 ----GDKDSSPQKE------VKYEPFSFAD--------DIGSNNCGYYDLQAVLTHQGRS 430
Query: 535 SSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSGGG 574
SSSGHYV+WVK+ WIK DDDKV ++ E++L+LSGGG
Sbjct: 431 SSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGG 470
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 128/178 (71%), Gaps = 8/178 (4%)
Query: 12 YIVKVKWGKETFE-VDVDTDEEPMLFKAQLYELTGVQIDRQKVMCKGATLKNDEWDNFKL 70
Y V VKWGKE FE V+++TDE PM+FKAQL+ LTGVQ RQKVM KG TLK+D+W N K+
Sbjct: 4 YSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKM 63
Query: 71 SNGSMVLLMGSKEEDSM-KEPVVKPKFVEDMNESERAVSLDLPAGLNNLGNTCYMNAVIQ 129
NG VL+MGS D++ +EP K FVEDM E + A +++LP GL NLGNTCYMNA +Q
Sbjct: 64 KNGMTVLMMGSA--DALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQ 121
Query: 130 CLKTVPELRKALKNLKGGLQPGSN--PAQSITASLRDLYECMDNMKISPSISPFIMLQ 185
C+++VPEL+ ALK G L+ AQ ITA+LRDL++ MD K S SI P I+LQ
Sbjct: 122 CIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMD--KTSSSIPPIILLQ 177
>sp|Q9JMA1|UBP14_MOUSE Ubiquitin carboxyl-terminal hydrolase 14 OS=Mus musculus GN=Usp14
PE=1 SV=3
Length = 493
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/400 (50%), Positives = 261/400 (65%), Gaps = 47/400 (11%)
Query: 189 LPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSN--PAQSITASLRDLYEC 246
LP GL NLGNTCYMNA +QC+++VPEL+ ALK G L+ AQ ITA+LRDL++
Sbjct: 103 LPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDS 162
Query: 247 MDNMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPG-EN 305
MD K S SI P I+LQ LH FP+FA+K + G Y+QQDANECW +M+R+L+ L E+
Sbjct: 163 MD--KTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIED 220
Query: 306 EEGQD-----------SAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYIT 354
+ G++ S K S I+QYF +T +KC+ESE E TKG E+ QLSC+I
Sbjct: 221 DSGRETDSSSAPAVTPSKKKSLIDQYFGVEFETTMKCTESEEEEVTKGKENQLQLSCFIN 280
Query: 355 TDVKYMLPGLKNKLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERIN 414
+VKY+ GLK +LQ++ITK+SP+L R+A+Y+K+SK+SRLPAYLTIQ VRFFYKEKE +N
Sbjct: 281 QEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVN 340
Query: 415 AKVLKDIKFPIEFDAYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEI 474
AKVLKD+KFP+ D YELCTPELQ K+ R KFK E+K+ ++
Sbjct: 341 AKVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNA------------ 388
Query: 475 YVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRT 534
K P + + F DIGSNN GYY LQAVLTH+GR+
Sbjct: 389 ----NDKNSPPKEIKYEPFSFAD---------------DIGSNNCGYYDLQAVLTHQGRS 429
Query: 535 SSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSGGG 574
SSSGHYV+WV++ WIK DDDKV ++ E++L+LSGGG
Sbjct: 430 SSSGHYVSWVRRKQDEWIKFDDDKVSIVTPEDILRLSGGG 469
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 155/247 (62%), Gaps = 32/247 (12%)
Query: 12 YIVKVKWGKETFE-VDVDTDEEPMLFKAQLYELTGVQIDRQKVMCKGATLKNDEWDNFKL 70
Y V VKWGKE FE V+++TDE PM+FKAQL+ LTGVQ RQKVM KG TLK+D+W N K+
Sbjct: 4 YSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKM 63
Query: 71 SNGSMVLLMGSKEEDSM-KEPVVKPKFVEDMNESERAVSLDLPAGLNNLGNTCYMNAVIQ 129
NG VL+MGS D++ +EP K FVEDM E + A +++LP GL NLGNTCYMNA +Q
Sbjct: 64 KNGMTVLMMGSA--DALPEEPSAKTVFVEDMTEEQLATAMELPCGLTNLGNTCYMNATVQ 121
Query: 130 CLKTVPELRKALKNLKGGLQPGSN--PAQSITASLRDLYECMDNMKISPSISPFIML--- 184
C+++VPEL+ ALK G L+ AQ ITA+LRDL++ MD K S SI P I+L
Sbjct: 122 CIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMD--KTSSSIPPIILLQFL 179
Query: 185 ------------QGRYLPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNP 232
QG+YL N C+ IQ ++ + + +A+++ G + S+
Sbjct: 180 HMAFPQFAEKGEQGQYLQQD----ANECW----IQMMRVLQQKLEAIED-DSGRETDSSS 230
Query: 233 AQSITAS 239
A ++T S
Sbjct: 231 APAVTPS 237
>sp|P40826|UBP14_RABIT Ubiquitin carboxyl-terminal hydrolase 14 OS=Oryctolagus cuniculus
GN=USP14 PE=1 SV=3
Length = 493
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/399 (50%), Positives = 260/399 (65%), Gaps = 45/399 (11%)
Query: 189 LPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSN--PAQSITASLRDLYEC 246
LP GL NLGNTCYMNA +QC+++VPEL+ ALK G L+ AQ ITA+LRDL++
Sbjct: 103 LPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDS 162
Query: 247 MDNMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGENE 306
MD K S SI P I+LQ LH FP+FA+K + G Y+QQDANECW +M+R+L+ L +
Sbjct: 163 MD--KTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIED 220
Query: 307 EG-----------QDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITT 355
+ S K S I+Q+F +T +KC+ESE E TKG E+ QLSC+I
Sbjct: 221 DSVKETDSSAAAVAPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQ 280
Query: 356 DVKYMLPGLKNKLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINA 415
+VKY+ GLK +LQ++ITK+SP+L R+A+Y+K+SK+SRLPAYLTIQ VRFFYKEKE +NA
Sbjct: 281 EVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNA 340
Query: 416 KVLKDIKFPIEFDAYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIY 475
KVLKD+KFP+ D YELCTPELQ K+ R KFK E+K+ ++ S P E+
Sbjct: 341 KVLKDVKFPLMLDVYELCTPELQEKMVSFRSKFKDIEDKKVNQQPNASDK-KSSPQKEV- 398
Query: 476 VRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRTS 535
R + F DIGSNN GYY LQAVLTH+GR+S
Sbjct: 399 -------------RYEPFSFAD---------------DIGSNNCGYYDLQAVLTHQGRSS 430
Query: 536 SSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSGGG 574
SSGHYV+WVK+ + WIK DDDKV ++ E++L+LSGGG
Sbjct: 431 SSGHYVSWVKRKHDEWIKFDDDKVSIVTPEDILRLSGGG 469
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 127/178 (71%), Gaps = 8/178 (4%)
Query: 12 YIVKVKWGKETFE-VDVDTDEEPMLFKAQLYELTGVQIDRQKVMCKGATLKNDEWDNFKL 70
Y V VKWGKE F V+++TDE PM+FKAQL+ LTGVQ RQ+VM KG TLK+D+W N K+
Sbjct: 4 YSVTVKWGKEKFGGVELNTDEPPMVFKAQLFALTGVQPARQRVMVKGGTLKDDDWGNIKI 63
Query: 71 SNGSMVLLMGSKEEDSM-KEPVVKPKFVEDMNESERAVSLDLPAGLNNLGNTCYMNAVIQ 129
NG +L+MGS D++ +EP K FVEDM E + A +++LP GL NLGNTCYMNA +Q
Sbjct: 64 KNGMTILMMGSA--DALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQ 121
Query: 130 CLKTVPELRKALKNLKGGLQPGSN--PAQSITASLRDLYECMDNMKISPSISPFIMLQ 185
C+++VPEL+ ALK G L+ AQ ITA+LRDL++ MD K S SI P I+LQ
Sbjct: 122 CIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMD--KTSSSIPPIILLQ 177
>sp|P54578|UBP14_HUMAN Ubiquitin carboxyl-terminal hydrolase 14 OS=Homo sapiens GN=USP14
PE=1 SV=3
Length = 494
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/400 (51%), Positives = 263/400 (65%), Gaps = 46/400 (11%)
Query: 189 LPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSN--PAQSITASLRDLYEC 246
LP GL NLGNTCYMNA +QC+++VPEL+ ALK G L+ AQ ITA+LRDL++
Sbjct: 103 LPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDS 162
Query: 247 MDNMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPG-EN 305
MD K S SI P I+LQ LH FP+FA+K + G Y+QQDANECW +M+R+L+ L E+
Sbjct: 163 MD--KTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIED 220
Query: 306 EEGQD-----------SAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYIT 354
+ ++ S K S I+Q+F +T +KC+ESE E TKG E+ QLSC+I
Sbjct: 221 DSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFIN 280
Query: 355 TDVKYMLPGLKNKLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERIN 414
+VKY+ GLK +LQ++ITK+SP+L R+A+Y+K+SK+SRLPAYLTIQ VRFFYKEKE +N
Sbjct: 281 QEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVN 340
Query: 415 AKVLKDIKFPIEFDAYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEI 474
AKVLKD+KFP+ D YELCTPELQ K+ R KFK E+K+ ++ T S P E+
Sbjct: 341 AKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSDK-KSSPQKEV 399
Query: 475 YVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRT 534
Y P F DIGSNN GYY LQAVLTH+GR+
Sbjct: 400 K-------YEP-------FSFAD---------------DIGSNNCGYYDLQAVLTHQGRS 430
Query: 535 SSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSGGG 574
SSSGHYV+WVK+ WIK DDDKV ++ E++L+LSGGG
Sbjct: 431 SSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGG 470
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 128/178 (71%), Gaps = 8/178 (4%)
Query: 12 YIVKVKWGKETFE-VDVDTDEEPMLFKAQLYELTGVQIDRQKVMCKGATLKNDEWDNFKL 70
Y V VKWGKE FE V+++TDE PM+FKAQL+ LTGVQ RQKVM KG TLK+D+W N K+
Sbjct: 4 YSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKI 63
Query: 71 SNGSMVLLMGSKEEDSM-KEPVVKPKFVEDMNESERAVSLDLPAGLNNLGNTCYMNAVIQ 129
NG +L+MGS D++ +EP K FVEDM E + A +++LP GL NLGNTCYMNA +Q
Sbjct: 64 KNGMTLLMMGSA--DALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQ 121
Query: 130 CLKTVPELRKALKNLKGGLQPGSN--PAQSITASLRDLYECMDNMKISPSISPFIMLQ 185
C+++VPEL+ ALK G L+ AQ ITA+LRDL++ MD K S SI P I+LQ
Sbjct: 122 CIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMD--KTSSSIPPIILLQ 177
>sp|P60051|UBP14_PANTR Ubiquitin carboxyl-terminal hydrolase 14 OS=Pan troglodytes
GN=USP14 PE=3 SV=2
Length = 493
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/400 (51%), Positives = 263/400 (65%), Gaps = 46/400 (11%)
Query: 189 LPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSN--PAQSITASLRDLYEC 246
LP GL NLGNTCYMNA +QC+++VPEL+ ALK G L+ AQ ITA+LRDL++
Sbjct: 103 LPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDS 162
Query: 247 MDNMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPG-EN 305
MD K S SI P I+LQ LH FP+FA+K + G Y+QQDANECW +M+R+L+ L E+
Sbjct: 163 MD--KTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIED 220
Query: 306 EEGQD-----------SAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYIT 354
+ ++ S K S I+Q+F +T +KC+ESE E TKG E+ QLSC+I
Sbjct: 221 DSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFIN 280
Query: 355 TDVKYMLPGLKNKLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERIN 414
+VKY+ GLK +LQ++ITK+SP+L R+A+Y+K+SK+SRLPAYLTIQ VRFFYKEKE +N
Sbjct: 281 QEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVN 340
Query: 415 AKVLKDIKFPIEFDAYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEI 474
AKVLKD+KFP+ D YELCTPELQ K+ R KFK E+K+ ++ T S P E+
Sbjct: 341 AKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSDK-KSSPQKEV 399
Query: 475 YVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRT 534
Y P F DIGSNN GYY LQAVLTH+GR+
Sbjct: 400 K-------YEP-------FSFAD---------------DIGSNNCGYYDLQAVLTHQGRS 430
Query: 535 SSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSGGG 574
SSSGHYV+WVK+ WIK DDDKV ++ E++L+LSGGG
Sbjct: 431 SSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGG 470
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 128/178 (71%), Gaps = 8/178 (4%)
Query: 12 YIVKVKWGKETFE-VDVDTDEEPMLFKAQLYELTGVQIDRQKVMCKGATLKNDEWDNFKL 70
Y V VKWGKE FE V+++TDE PM+FKAQL+ LTGVQ RQKVM KG TLK+D+W N K+
Sbjct: 4 YSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKI 63
Query: 71 SNGSMVLLMGSKEEDSM-KEPVVKPKFVEDMNESERAVSLDLPAGLNNLGNTCYMNAVIQ 129
NG +L+MGS D++ +EP K FVEDM E + A +++LP GL NLGNTCYMNA +Q
Sbjct: 64 KNGMTLLMMGSA--DALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQ 121
Query: 130 CLKTVPELRKALKNLKGGLQPGSN--PAQSITASLRDLYECMDNMKISPSISPFIMLQ 185
C+++VPEL+ ALK G L+ AQ ITA+LRDL++ MD K S SI P I+LQ
Sbjct: 122 CIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMD--KTSSSIPPIILLQ 177
>sp|Q949Y0|UBP6_ARATH Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana
GN=UBP6 PE=1 SV=1
Length = 482
Score = 239 bits (609), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 149/396 (37%), Positives = 218/396 (55%), Gaps = 46/396 (11%)
Query: 191 AGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSN----PAQSITASLRDLYEC 246
AGL NLGNTCYMN+ +QCLK+VPEL+ AL N L SN + +T + R+L+
Sbjct: 104 AGLVNLGNTCYMNSTVQCLKSVPELKSALSNY--SLAARSNDVDQTSHMLTVATRELFGE 161
Query: 247 MDNMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPG-EN 305
+D + S S F M VL +P+F+ + +G +MQQDA ECWT+++ L +L +
Sbjct: 162 LDRSVNAVSPSQFWM--VLRKKYPQFS-QLQNGMHMQQDAEECWTQLLYTLSQSLKAPTS 218
Query: 306 EEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPGLK 365
EG D+ K+ F + + L C ES E TES L C+I+ +V ++ GLK
Sbjct: 219 SEGADAVKA-----LFGVNLQSRLHCQESGEESSE--TESVYSLKCHISHEVNHLHEGLK 271
Query: 366 NKLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKDIKFPI 425
+ L+ ++ K SP+L R A+YVK S + LP YLT+QFVRFF+K + AK+L+ + +P+
Sbjct: 272 HGLKGELEKTSPALGRTALYVKESLIDSLPRYLTVQFVRFFWKRESNQKAKILRKVDYPL 331
Query: 426 EFDAYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIYAP 485
D ++LC+ +L+ KL R+K + E K + G + A
Sbjct: 332 VLDIFDLCSEDLRKKLEAPRQKLREEEGK----------------------KLGLQTSAK 369
Query: 486 VGDRIQDFGVKSTEFQSRGQGSSP-------GRVDIGSNNSGYYTLQAVLTHKGRTSSSG 538
G + D + E + G G S + ++ +G Y L AVLTHKGR++ SG
Sbjct: 370 SGSKDSDVKMTDAEASANGSGESSTVNPQEGTSSEKETHMTGIYDLVAVLTHKGRSADSG 429
Query: 539 HYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSGGG 574
HYVAWVK+ +G WI+ DDD EE++ KLSGGG
Sbjct: 430 HYVAWVKQESGKWIQYDDDNPSMQREEDITKLSGGG 465
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 113/195 (57%), Gaps = 10/195 (5%)
Query: 14 VKVKWGKETFE-VDVDTDEEPMLFKAQLYELTGVQIDRQKVMCKGATLKND-EWDNFKLS 71
V VKW K+ + +++D P +FKAQLY+LTGV +RQK+M KG LK+D +W +
Sbjct: 4 VSVKWQKKVLDGIEIDVSLPPYVFKAQLYDLTGVPPERQKIMVKGGLLKDDGDWAAIGVK 63
Query: 72 NGSMVLLMGSKEEDSMKEPVVKPKFVEDMNESERAVSLDLPAGLNNLGNTCYMNAVIQCL 131
+G +++MG+ +E +K P F ED+ E A +L AGL NLGNTCYMN+ +QCL
Sbjct: 64 DGQKLMMMGTADE-IVKAPEKAIVFAEDLPEEALATNLGYSAGLVNLGNTCYMNSTVQCL 122
Query: 132 KTVPELRKALKNLKGGLQPGSN----PAQSITASLRDLYECMDNMKISPSISPFIMLQGR 187
K+VPEL+ AL N L SN + +T + R+L+ +D + S S F M+ +
Sbjct: 123 KSVPELKSALSNY--SLAARSNDVDQTSHMLTVATRELFGELDRSVNAVSPSQFWMVLRK 180
Query: 188 YLPAGLNNLGNTCYM 202
P + L N +M
Sbjct: 181 KYPQ-FSQLQNGMHM 194
>sp|Q84WC6|UBP7_ARATH Ubiquitin carboxyl-terminal hydrolase 7 OS=Arabidopsis thaliana
GN=UBP7 PE=1 SV=1
Length = 477
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 215/392 (54%), Gaps = 43/392 (10%)
Query: 191 AGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGG-LQPGSNPAQSITASLRDLYECMDN 249
AGL NLGNTCYMN+ +QCL +VPEL+ L N + + + +T + R+L+ +D
Sbjct: 104 AGLVNLGNTCYMNSTMQCLISVPELKSELSNYQSARTKDVDQTSHMLTVATRELFSELD- 162
Query: 250 MKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTAL----PGEN 305
K +++P VL +P+FA + +G++MQQDA ECWT+M+ L +L P E+
Sbjct: 163 -KSVKAVAPMPFWMVLQKKYPQFA-QLHNGNHMQQDAEECWTQMLYTLSQSLKLPSPSED 220
Query: 306 EEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPGLK 365
+ ++ F + L C ES E + TES L C+I+ +V ++ GLK
Sbjct: 221 PDA--------VKALFGLNLLNRLHCQESSEE--SSETESVFSLKCHISHEVNHLHEGLK 270
Query: 366 NKLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKDIKFPI 425
+ L+ ++ K SPSL R AVYVK S + LP YLT+QFVRFF+K + AK+L+ + +P+
Sbjct: 271 HGLKGELEKTSPSLGRTAVYVKESLIDSLPRYLTVQFVRFFWKRESNQKAKILRKVDYPL 330
Query: 426 EFDAYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIYAP 485
E D Y+LC+ +L+ KL R+K + E + + G + A
Sbjct: 331 ELDIYDLCSEDLRKKLEAPRQKLRDIEGQ----------------------KLGLQASAK 368
Query: 486 VGDRIQDFGVKSTEFQSRGQG-SSPGRVDIGS--NNSGYYTLQAVLTHKGRTSSSGHYVA 542
+ D + E S G SS G G+ + +G Y L +VLTHKGR++ SGHYVA
Sbjct: 369 SSSKGDDVKMTDAEGSSNQSGESSTGDQQEGASPHMTGIYDLVSVLTHKGRSADSGHYVA 428
Query: 543 WVKKPNGTWIKCDDDKVYPISEEEVLKLSGGG 574
WVK+ +G W++ DD E+++KLSGGG
Sbjct: 429 WVKQESGKWVQYDDANTSLQRGEDIIKLSGGG 460
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 120/196 (61%), Gaps = 7/196 (3%)
Query: 14 VKVKWGKETFE-VDVDTDEEPMLFKAQLYELTGVQIDRQKVMCKGATLKND-EWDNFKLS 71
V VKW K+ FE +++DT + P +FKAQLY+L+GV +RQK+M KG LK+D +W L
Sbjct: 4 VSVKWQKKVFESIEIDTSQPPFVFKAQLYDLSGVPPERQKIMVKGGLLKDDADWSTLGLK 63
Query: 72 NGSMVLLMGSKEEDSMKEPVVKPKFVEDMNESERAVSLDLPAGLNNLGNTCYMNAVIQCL 131
NG +++MG+ +E +K P P F+ED+ E ++A +L AGL NLGNTCYMN+ +QCL
Sbjct: 64 NGQKLMMMGTADE-IVKAPEKGPVFMEDLPEEQQAANLGYSAGLVNLGNTCYMNSTMQCL 122
Query: 132 KTVPELRKALKNLKGG-LQPGSNPAQSITASLRDLYECMDNMKISPSISPFIMLQGRYLP 190
+VPEL+ L N + + + +T + R+L+ +D + + PF M+ + P
Sbjct: 123 ISVPELKSELSNYQSARTKDVDQTSHMLTVATRELFSELDKSVKAVAPMPFWMVLQKKYP 182
Query: 191 --AGLNNLGNTCYMNA 204
A L+N GN +A
Sbjct: 183 QFAQLHN-GNHMQQDA 197
>sp|Q92353|UBP6_SCHPO Ubiquitin carboxyl-terminal hydrolase 6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp6 PE=1 SV=2
Length = 468
Score = 228 bits (581), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 209/392 (53%), Gaps = 42/392 (10%)
Query: 190 PAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDN 249
P+GL NLGNTCYMN+ +Q L+ +PEL A+ N + + A R L +++
Sbjct: 100 PSGLINLGNTCYMNSTVQMLRAIPELSDAVSQF--------NSSGGLVAEYRTL---LNS 148
Query: 250 MKISPSISPFIMLQVLHNVFPRFADKT-DDGSYMQQDANECWTEMVRMLKTALPGENEEG 308
M+ + ++P LQ L +P+FA+ + + G Y QQDA ECW+ ++ +L+ +L E
Sbjct: 149 MQSNAPVTPMRFLQSLRMEYPQFAEMSRETGGYAQQDAEECWSFLLSVLQRSLSSE---- 204
Query: 309 QDSAKSSFIEQYFYTIMDTELKCSESET-EPPTKGTESFQQLSCYITTDVKYMLPGLKNK 367
++++ + + +KC E+E E P+ ++F L C+I+ YM G+
Sbjct: 205 -------WVQKNMAGKLLSTMKCDENEVQEQPSISHDTFLSLPCHISMHTSYMTQGILEG 257
Query: 368 LQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKDIKFPIEF 427
L +I+K S L+RDA+Y K S++SRLP YLT+ FVRF++K AK+L+ +KFP E
Sbjct: 258 LTQKISKHSDVLNRDAMYSKISRISRLPNYLTVNFVRFYWKASIGKKAKILRKVKFPFEL 317
Query: 428 DAYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIYAPVG 487
DA E CTPEL KL P+R+K + E+ + E + + I DE
Sbjct: 318 DAVEFCTPELSQKLIPVRDKLREIEKNDEEHERAAKRIKIQPSEDE-------------- 363
Query: 488 DRIQDFGVKSTEFQSRGQGSSPGRVDI-GSNNSGYYTLQAVLTHKGRTSSSGHYVAWVKK 546
+ + + T+ + P D G+N +G Y L VL+H G ++SSGHY AW++
Sbjct: 364 -KEAEAECRLTQVATCQSLVDPELADDEGANPTGLYDLVGVLSHAGASASSGHYQAWIRN 422
Query: 547 PN--GTWIKCDDDKVYPISEEEVLKLSGGGKV 576
N W + +D KV + E++ L GGG+
Sbjct: 423 SNNRAEWFRFNDAKVSIVPAEKIETLDGGGEA 454
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 14 VKVKWGKETFEVDVDTDEEPMLFKAQLYELTGVQIDRQKVMCKGATLKNDEW-DNFKLSN 72
+ ++W + ++++++ +E K QLY LT V +RQKV+ KG LK+D + +
Sbjct: 5 IAIRWQGKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKP 64
Query: 73 GSMVLLMGSKEEDSMKEPVVKPKFVEDMNESERAVSLDLPAGLNNLGNTCYMNAVIQCLK 132
+ +L+MG+ E P P + E E + P+GL NLGNTCYMN+ +Q L+
Sbjct: 65 NATLLMMGTAGE----LPTAMPIPAVESVEQEESEDDGYPSGLINLGNTCYMNSTVQMLR 120
Query: 133 TVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMKISPSISPFIMLQ 185
+PEL A+ N + + A R L +++M+ + ++P LQ
Sbjct: 121 AIPELSDAVSQF--------NSSGGLVAEYRTL---LNSMQSNAPVTPMRFLQ 162
>sp|Q17361|UBP14_CAEEL Ubiquitin carboxyl-terminal hydrolase 14 OS=Caenorhabditis elegans
GN=usp-14 PE=2 SV=2
Length = 489
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/393 (36%), Positives = 208/393 (52%), Gaps = 56/393 (14%)
Query: 190 PAGLNNLGNTCYMNAVIQCLKTVPEL----RKALKNLKGGLQPGSNPAQSITASLRDLYE 245
P GL NLGNTCY N+ +Q LK V EL + ++ + + N A ++ SLRD
Sbjct: 101 PCGLANLGNTCYFNSCVQMLKEVNELVLKPAEEMRIREHNDRLCHNLA-TLFNSLRDKDR 159
Query: 246 CMDNMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKT--ALPG 303
+ + K P I PF + L + FP+F + QQDANEC ++ + L G
Sbjct: 160 ALRS-KGEP-IKPFAAILTLSDSFPQFE------KFKQQDANECLVSIMSNVTRIYGLSG 211
Query: 304 ENEEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPG 363
N IE F +T +KC ES+ E K E QL+CY+ DV+++ G
Sbjct: 212 WN-----------IESLFRIQTETTMKCLESD-EVSEKKVERNNQLTCYVNQDVRFLQTG 259
Query: 364 LKNKLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKDIKF 423
+K ++++T+ S L+RDA + K +++SRLP YLT+ RFFYKE + NAK+LK ++F
Sbjct: 260 IKAGFEEEMTRNSEELNRDAKWQKNTQISRLPKYLTVNINRFFYKESTKTNAKILKSVQF 319
Query: 424 PIEFDAYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIY 483
P++ D Y+LC+ EL+ KL R K+ E+ + E R + +
Sbjct: 320 PMQLDTYDLCSQELKDKLVARRADIKLEEDAKLERELRKKV-----------------LD 362
Query: 484 APVGDRIQDFGVK-STEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRTSSSGHYVA 542
GD+I D GV T F+ D GSNNSG+Y L+ ++THKGR+S GHYVA
Sbjct: 363 KEQGDKIFDDGVALPTAFED----------DAGSNNSGFYDLKGIITHKGRSSQDGHYVA 412
Query: 543 WVKKP-NGTWIKCDDDKVYPISEEEVLKLSGGG 574
W++ +G W DD+ V + EE +LK SGGG
Sbjct: 413 WMRSSEDGKWRLFDDEHVTVVDEEAILKTSGGG 445
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 13 IVKVKWGKETFEVDVDTDEEPMLFKAQLYELTGVQIDRQKVMCKGATLKNDEWDNFKLSN 72
IV VKW KE + V+VDT PM+FKAQL+ LT V +RQKV+ G TL +D+W+ +
Sbjct: 3 IVNVKWQKEKYVVEVDTSAPPMVFKAQLFALTQVVPERQKVVIMGRTLGDDDWEGITIKE 62
Query: 73 GSMVLLMGSKEEDSMKEPVVKPKFVEDMNESERAVSLDLPAGLNNLGNTCYMNAVIQCLK 132
+++MGS E K P V K + ++ +S P GL NLGNTCY N+ +Q LK
Sbjct: 63 NMTIMMMGSVGEIP-KPPTVLEKKQANRDKQAEEISALYPCGLANLGNTCYFNSCVQMLK 121
Query: 133 TVPEL 137
V EL
Sbjct: 122 EVNEL 126
>sp|P43593|UBP6_YEAST Ubiquitin carboxyl-terminal hydrolase 6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP6 PE=1 SV=1
Length = 499
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 194/413 (46%), Gaps = 60/413 (14%)
Query: 189 LPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITAS--------- 239
LP G N+GNTCY+NA +Q L V +LR + N NP+Q ++ S
Sbjct: 107 LPVGFKNMGNTCYLNATLQALYRVNDLRDMILNY--------NPSQGVSNSGAQDEEIHK 158
Query: 240 --LRDLYECMDNM--KISPSISPFIMLQVLHNVFPRFADKTDDGS-YMQQDANECWTEMV 294
+ ++ C +N+ K S+ P ++L L +P+FA++ G Y QQDA E +T++
Sbjct: 159 QIVIEMKRCFENLQNKSFKSVLPIVLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLF 218
Query: 295 RMLKTALPGENEEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYIT 354
+ D F Q+ TI DT ++ + K ES +L C+I+
Sbjct: 219 HSMSIVFG-------DKFSEDFRIQFKTTIKDTA-----NDNDITVKENESDSKLQCHIS 266
Query: 355 TDVKYMLPGLKNKLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERIN 414
+M GL L ++I KRS +++Y K+SRLP +LT+Q+VRFF+K
Sbjct: 267 GTTNFMRNGLLEGLNEKIEKRSDLTGANSIYSVEKKISRLPKFLTVQYVRFFWKRSTNKK 326
Query: 415 AKVLKDIKFPIEFDAYELCTPELQAKLAPMREKFKIAEE----------KEAFEEFRTQY 464
+K+L+ + FP + D ++ TPE A+ +R++ + E+ + F+ ++
Sbjct: 327 SKILRKVVFPFQLDVADMLTPEYAAEKVKVRDELRKVEKEKNEKEREIKRRKFDPSSSEN 386
Query: 465 VFISIPMDEIYVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTL 524
V E V + + ++ + P ++ G N S Y L
Sbjct: 387 VMTPREQYETQVALNES--------------EKDQWLEEYKKHFPPNLEKGENPSCVYNL 432
Query: 525 QAVLTHKGRTSSSGHYVAWVKKP--NGTWIKCDDDKVYPISEEEVLKLSGGGK 575
V+TH+G S SGHY A+++ W K +DDKV + +E++ L+GGG+
Sbjct: 433 IGVITHQGANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESLAGGGE 485
>sp|Q8CEG8|UBP27_MOUSE Ubiquitin carboxyl-terminal hydrolase 27 OS=Mus musculus GN=Usp27
PE=2 SV=2
Length = 438
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 151/389 (38%), Gaps = 62/389 (15%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQ---PGSNPAQSITASLRDLYECMD 248
GL NLGNTC+MN ++Q L P LR + + + P +++ R+LY
Sbjct: 79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLFRELY---- 134
Query: 249 NMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGEN--- 305
S + SP + ++LH V + Y QQDA+E + +L G++
Sbjct: 135 ----SGNPSPHVPYKLLHLV---WIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGK 187
Query: 306 EEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPGLK 365
+ + I+Q F + +++ C T C+ D+ LPG
Sbjct: 188 VASNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTID-------PCW---DISLDLPGSC 237
Query: 366 NKLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQ--FVRFFYKEKERINAKVLKDIKF 423
R SL+ + S +P T+ RF E +AK+
Sbjct: 238 TSFWPMSPGRESSLNGE---------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCG--- 285
Query: 424 PIEFDAYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIY 483
+Y+ T +L K P+ F + + ++ R +IS P++
Sbjct: 286 --SCQSYQESTKQLTMKKLPVVACFHFKRFEHSAKQRRKITTYISFPLEL---------- 333
Query: 484 APVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRTSSSGHYVAW 543
+ F S E + GQ P +NN Y+L AV+ H+G T SGHY ++
Sbjct: 334 -----DMTPFMASSKETRVNGQLQLPTN---SANNENKYSLFAVVNHQG-TLESGHYTSF 384
Query: 544 VKKPNGTWIKCDDDKVYPISEEEVLKLSG 572
++ W KCDD + S ++VL G
Sbjct: 385 IRHHRDQWFKCDDAVITKASIKDVLDSEG 413
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELR 138
GL NLGNTC+MN ++Q L P LR
Sbjct: 79 GLINLGNTCFMNCIVQALTHTPILR 103
>sp|Q70EK9|UBP51_HUMAN Ubiquitin carboxyl-terminal hydrolase 51 OS=Homo sapiens GN=USP51
PE=2 SV=1
Length = 711
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 152/384 (39%), Gaps = 52/384 (13%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL NLGNTC+MN ++Q L +P L+ + K S P+ + + L+ M
Sbjct: 364 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTS-PSLCLVCEMSSLFHAM---- 418
Query: 252 ISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTAL---PGENEEG 308
S S +P I ++LH ++ Y QQDA+E ++ +L G E
Sbjct: 419 YSGSRTPHIPYKLLHLIW---IHAEHLAGYRQQDAHEFLIAILDVLHRHSKDDSGGQEAN 475
Query: 309 QDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPGLKNKL 368
+ + I+Q F + +++ C + T C+ D+ LPG
Sbjct: 476 NPNCCNCIIDQIFTGGLQSDVTCQACHSVSTTID-------PCW---DISLDLPGSCATF 525
Query: 369 QDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKDIKFPIEFD 428
Q +R+ D+ + + +P+ LT F E +AK+ +
Sbjct: 526 DSQNPERA-----DSTVSRDDHIPGIPS-LTDCLQWFTRPEHLGSSAKIKCN-----SCQ 574
Query: 429 AYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIYAPVGD 488
+Y+ T +L K P+ F + + ++ R FIS P++ F
Sbjct: 575 SYQESTKQLTMKKLPIVACFHLKRFEHVGKQRRKINTFISFPLELDMTPF---------- 624
Query: 489 RIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRTSSSGHYVAWVKKPN 548
+ ST+ +G P N Y+L AV+ H G T SGHY +++++
Sbjct: 625 ------LASTKESRMKEGQPPTDC---VPNENKYSLFAVINHHG-TLESGHYTSFIRQQK 674
Query: 549 GTWIKCDDDKVYPISEEEVLKLSG 572
W CDD + + E++L G
Sbjct: 675 DQWFSCDDAIITKATIEDLLYSEG 698
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 12/152 (7%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 173
GL NLGNTC+MN ++Q L +P L+ + K S P+ + + L+ M +
Sbjct: 364 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTS-PSLCLVCEMSSLFHAMYSGS 422
Query: 174 ISPSISPFIMLQGRYLPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPA 233
+P I P+ +L ++ A +L +A + + L + K+ GG Q +NP
Sbjct: 423 RTPHI-PYKLLHLIWIHA--EHLAGYRQQDAHEFLIAILDVLHRHSKDDSGG-QEANNPN 478
Query: 234 -------QSITASLRDLYECMDNMKISPSISP 258
Q T L+ C +S +I P
Sbjct: 479 CCNCIIDQIFTGGLQSDVTCQACHSVSTTIDP 510
>sp|A6NNY8|UBP27_HUMAN Ubiquitin carboxyl-terminal hydrolase 27 OS=Homo sapiens GN=USP27X
PE=2 SV=3
Length = 438
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 149/389 (38%), Gaps = 62/389 (15%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQ---PGSNPAQSITASLRDLYECMD 248
GL NLGNTC+MN ++Q L P LR + + + P +++ R+LY
Sbjct: 79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLFRELY---- 134
Query: 249 NMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGEN--- 305
S + SP + ++LH V + Y QQDA+E + +L G++
Sbjct: 135 ----SGNPSPHVPYKLLHLV---WIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGK 187
Query: 306 EEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPGLK 365
+ + I+Q F + +++ C T C+ D+ LPG
Sbjct: 188 AANNPNHCNCIIDQIFTGGLQSDVTCQACHGVSTTID-------PCW---DISLDLPGSC 237
Query: 366 NKLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQ--FVRFFYKEKERINAKVLKDIKF 423
R S++ + S +P T+ RF E +AK+
Sbjct: 238 TSFWPMSPGRESSVNGE---------SHIPGITTLTDCLRRFTRPEHLGSSAKIKCG--- 285
Query: 424 PIEFDAYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIY 483
+Y+ T +L P+ F + + ++ R +IS P++
Sbjct: 286 --SCQSYQESTKQLTMNKLPVVACFHFKRFEHSAKQRRKITTYISFPLEL---------- 333
Query: 484 APVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRTSSSGHYVAW 543
+ F S E + GQ P NN Y+L AV+ H+G T SGHY ++
Sbjct: 334 -----DMTPFMASSKESRMNGQLQLPTN---SGNNENKYSLFAVVNHQG-TLESGHYTSF 384
Query: 544 VKKPNGTWIKCDDDKVYPISEEEVLKLSG 572
++ W KCDD + S ++VL G
Sbjct: 385 IRHHKDQWFKCDDAVITKASIKDVLDSEG 413
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELR 138
GL NLGNTC+MN ++Q L P LR
Sbjct: 79 GLINLGNTCFMNCIVQALTHTPILR 103
>sp|A6H8I0|UBP22_DANRE Ubiquitin carboxyl-terminal hydrolase 22 OS=Danio rerio GN=usp22
PE=2 SV=1
Length = 506
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 149/383 (38%), Gaps = 51/383 (13%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL NLGNTC+MN ++Q L P LR + + + SN + + L++ +
Sbjct: 160 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSNSC--LVCEMSQLFQEFYSGH 217
Query: 252 ISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGENEEGQDS 311
SP I PF +L ++ + Y QQDA+E + +L +N + ++
Sbjct: 218 RSPHI-PFRLLHLV------WTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDNGKKANN 270
Query: 312 AK--SSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPGLKNKLQ 369
+ I+Q F + +++ C T + F D+ LPG
Sbjct: 271 PNHCNCIIDQIFTGGLQSDVTCQVCHGVSTT--IDPFW--------DISLDLPGSSTPFW 320
Query: 370 DQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKDIKFPIEFDA 429
SP D V + LT RF E +AK+ +
Sbjct: 321 ----PLSPGSDGSVVNGDSHPSG--ATTLTDCLRRFTRPEHLGSSAKIKCS-----GCHS 369
Query: 430 YELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIYAPVGDR 489
Y+ T +L K P+ F + + + + R ++S P++
Sbjct: 370 YQESTKQLTMKRLPIVACFHLKRFEHSAKLRRKITTYVSFPLEL---------------D 414
Query: 490 IQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRTSSSGHYVAWVKKPNG 549
+ F S E + GQ P VD NN Y+L AV+ H+G T SGHY ++++
Sbjct: 415 MTPFMASSKESRMNGQYQQP--VD-SLNNDNKYSLFAVVNHQG-TLESGHYTTFIRQHKD 470
Query: 550 TWIKCDDDKVYPISEEEVLKLSG 572
W KCDD + S ++VL G
Sbjct: 471 QWFKCDDAIITKASIKDVLDSEG 493
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 17/192 (8%)
Query: 78 LMGSKEEDSMKEPVVKPKFVEDMNESERAVSLDLPAGLN---NLGNTCYMNAVIQCLKTV 134
L G E+ SM EP + + N R ++ + GL NLGNTC+MN ++Q L
Sbjct: 121 LQGIGEKYSMWEPTKRELELLRHNPKRRKITANCTIGLRGLINLGNTCFMNCIVQALTHT 180
Query: 135 PELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMKISPSISPFIMLQGRYLPAGLN 194
P LR + + + SN + + L++ + SP I PF +L + A
Sbjct: 181 PLLRDFFLSDRHKCEMQSNSC--LVCEMSQLFQEFYSGHRSPHI-PFRLLHLVWTHA--R 235
Query: 195 NLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPA-------QSITASLRDLYECM 247
+L +A + + L + K+ G + +NP Q T L+ C
Sbjct: 236 HLAGYEQQDAHEFLIAALDVLHRHCKDDNG--KKANNPNHCNCIIDQIFTGGLQSDVTCQ 293
Query: 248 DNMKISPSISPF 259
+S +I PF
Sbjct: 294 VCHGVSTTIDPF 305
>sp|Q9UPT9|UBP22_HUMAN Ubiquitin carboxyl-terminal hydrolase 22 OS=Homo sapiens GN=USP22
PE=1 SV=2
Length = 525
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 153/384 (39%), Gaps = 51/384 (13%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL NLGNTC+MN ++Q L P LR + + + S P+ + + L++ +
Sbjct: 177 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQS-PSSCLVCEMSSLFQEFYSGH 235
Query: 252 ISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGEN---EEG 308
SP I P+ +L ++ + Y QQDA+E + +L G++ +
Sbjct: 236 RSPHI-PYKLLHLV------WTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 288
Query: 309 QDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPGLKNKL 368
+ + I+Q F + +++ C T + F D+ LPG
Sbjct: 289 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTT--IDPFW--------DISLDLPGSSTPF 338
Query: 369 QDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKDIKFPIEFD 428
SP + + V + S VS LT RF E +AK+
Sbjct: 339 W----PLSPGSEGNVVNGE-SHVSGTTT-LTDCLRRFTRPEHLGSSAKIKCS-----GCH 387
Query: 429 AYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIYAPVGD 488
+Y+ T +L K P+ F + + + + R ++S P++
Sbjct: 388 SYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLEL--------------- 432
Query: 489 RIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRTSSSGHYVAWVKKPN 548
+ F S E + GQ P NN Y+L AV+ H+G T SGHY +++++
Sbjct: 433 DMTPFMASSKESRMNGQYQQPTD---SLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQHK 488
Query: 549 GTWIKCDDDKVYPISEEEVLKLSG 572
W KCDD + S ++VL G
Sbjct: 489 DQWFKCDDAIITKASIKDVLDSEG 512
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 15/192 (7%)
Query: 78 LMGSKEEDSMKEPVVKPKFVEDMNESERAVSLDLPAGLN---NLGNTCYMNAVIQCLKTV 134
+ G E+ S EP + + N R ++ + GL NLGNTC+MN ++Q L
Sbjct: 138 MQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHT 197
Query: 135 PELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMKISPSISPFIMLQGRYLPAGLN 194
P LR + + + S P+ + + L++ + SP I P+ +L + A
Sbjct: 198 PLLRDFFLSDRHRCEMQS-PSSCLVCEMSSLFQEFYSGHRSPHI-PYKLLHLVWTHA--R 253
Query: 195 NLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPA-------QSITASLRDLYECM 247
+L +A + + L + K G + +NP Q T L+ C
Sbjct: 254 HLAGYEQQDAHEFLIAALDVLHRHCKGDDNG-KKANNPNHCNCIIDQIFTGGLQSDVTCQ 312
Query: 248 DNMKISPSISPF 259
+S +I PF
Sbjct: 313 VCHGVSTTIDPF 324
>sp|P0C8Z3|UBP22_BOVIN Ubiquitin carboxyl-terminal hydrolase 22 OS=Bos taurus GN=USP22
PE=2 SV=1
Length = 514
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 150/384 (39%), Gaps = 51/384 (13%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL NLGNTC+MN ++Q L P LR + + + S P+ + + L++ +
Sbjct: 166 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQS-PSSCLVCEMSSLFQEFYSGH 224
Query: 252 ISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGEN---EEG 308
SP I P+ +L ++ + Y QQDA+E + +L G++ +
Sbjct: 225 RSPHI-PYKLLHLV------WTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 277
Query: 309 QDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPGLKNKL 368
+ + I+Q F + +++ C T + F D+ LPG
Sbjct: 278 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTT--IDPFW--------DISLDLPGSSTPF 327
Query: 369 QDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKDIKFPIEFD 428
SP +V S VS LT RF E +AK+
Sbjct: 328 W----PLSPG-SESSVVNGESHVSGTTT-LTDCLRRFTRPEHLGSSAKIKCS-----GCH 376
Query: 429 AYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIYAPVGD 488
+Y+ T +L K P+ F + + + + R ++S P++
Sbjct: 377 SYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLEL--------------- 421
Query: 489 RIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRTSSSGHYVAWVKKPN 548
+ F S E + GQ P NN Y+L AV+ H+G T SGHY +++++
Sbjct: 422 DMTPFMASSKESRMNGQYQQPTD---SLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQHK 477
Query: 549 GTWIKCDDDKVYPISEEEVLKLSG 572
W KCDD + S +VL G
Sbjct: 478 DQWFKCDDAIITKASIADVLDSEG 501
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 15/192 (7%)
Query: 78 LMGSKEEDSMKEPVVKPKFVEDMNESERAVSLDLPAGLN---NLGNTCYMNAVIQCLKTV 134
+ G E+ S EP + + N R ++ + GL NLGNTC+MN ++Q L
Sbjct: 127 MQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHT 186
Query: 135 PELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMKISPSISPFIMLQGRYLPAGLN 194
P LR + + + S P+ + + L++ + SP I P+ +L + A
Sbjct: 187 PLLRDFFLSDRHRCEMQS-PSSCLVCEMSSLFQEFYSGHRSPHI-PYKLLHLVWTHA--R 242
Query: 195 NLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPA-------QSITASLRDLYECM 247
+L +A + + L + K G + +NP Q T L+ C
Sbjct: 243 HLAGYEQQDAHEFLIAALDVLHRHCKGDDNG-KKANNPNHCNCIIDQIFTGGLQSDVTCQ 301
Query: 248 DNMKISPSISPF 259
+S +I PF
Sbjct: 302 VCHGVSTTIDPF 313
>sp|Q5DU02|UBP22_MOUSE Ubiquitin carboxyl-terminal hydrolase 22 OS=Mus musculus GN=Usp22
PE=2 SV=2
Length = 525
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 152/384 (39%), Gaps = 51/384 (13%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL NLGNTC+MN ++Q L P LR + + + S P+ + + L++ +
Sbjct: 177 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQS-PSSCLVCEMSSLFQEFYSGH 235
Query: 252 ISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGEN---EEG 308
SP I P+ +L ++ + Y QQDA+E + +L G++ +
Sbjct: 236 RSPHI-PYKLLHLV------WTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 288
Query: 309 QDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPGLKNKL 368
+ + I+Q F + +++ C T + F D+ LPG
Sbjct: 289 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTT--IDPFW--------DISLDLPGSSTPF 338
Query: 369 QDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKDIKFPIEFD 428
SP + V ++ LT RF E +AK+
Sbjct: 339 W----PLSPGSEGSVVNGESHASG--TTTLTDCLRRFTRPEHLGSSAKIKCS-----GCH 387
Query: 429 AYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIYAPVGD 488
+Y+ T +L K P+ F + + + + R ++S P++
Sbjct: 388 SYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLEL--------------- 432
Query: 489 RIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRTSSSGHYVAWVKKPN 548
+ F S E + GQ P +D NN Y+L AV+ H+G T SGHY +++++
Sbjct: 433 DMTPFMASSKESRMNGQYQQP--LD-SLNNDNKYSLFAVVNHQG-TLESGHYTSFIRQHK 488
Query: 549 GTWIKCDDDKVYPISEEEVLKLSG 572
W KCDD + S ++VL G
Sbjct: 489 DQWFKCDDAIITKASIKDVLDSEG 512
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 15/192 (7%)
Query: 78 LMGSKEEDSMKEPVVKPKFVEDMNESERAVSLDLPAGLN---NLGNTCYMNAVIQCLKTV 134
+ G E+ S EP + + N R ++ + GL NLGNTC+MN ++Q L
Sbjct: 138 MQGVGEKFSTWEPTKRELELLKHNPKRRKITSNCTIGLRGLINLGNTCFMNCIVQALTHT 197
Query: 135 PELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMKISPSISPFIMLQGRYLPAGLN 194
P LR + + + S P+ + + L++ + SP I P+ +L + A
Sbjct: 198 PLLRDFFLSDRHRCEMQS-PSSCLVCEMSSLFQEFYSGHRSPHI-PYKLLHLVWTHA--R 253
Query: 195 NLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPA-------QSITASLRDLYECM 247
+L +A + + L + K G + +NP Q T L+ C
Sbjct: 254 HLAGYEQQDAHEFLIAALDVLHRHCKGDDNG-KKANNPNHCNCIIDQIFTGGLQSDVTCQ 312
Query: 248 DNMKISPSISPF 259
+S +I PF
Sbjct: 313 VCHGVSTTIDPF 324
>sp|Q6GNI6|UB22A_XENLA Ubiquitin carboxyl-terminal hydrolase 22-A OS=Xenopus laevis
GN=usp22-a PE=2 SV=1
Length = 523
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 151/384 (39%), Gaps = 51/384 (13%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL NLGNTC+MN ++Q L P LR + + + S P + + L++ +
Sbjct: 175 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQS-PNSCLVCEMSTLFQEFYSGH 233
Query: 252 ISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGEN---EEG 308
SP I P+ +L ++ + Y QQDA+E + +L G++ +
Sbjct: 234 RSPHI-PYRLLHLV------WTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 286
Query: 309 QDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPGLKNKL 368
+ + I+Q F + +++ C T + F D+ LPG
Sbjct: 287 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTT--IDPFW--------DISLDLPGSSTPF 336
Query: 369 QDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKDIKFPIEFD 428
SP D V + S VS LT RF E +AK+
Sbjct: 337 W----PLSPGSDAGVVNGE-SHVSGTTT-LTDCLRRFTRPEHLGSSAKIKCS-----GCH 385
Query: 429 AYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIYAPVGD 488
+Y+ T +L K P+ F + + + + R ++S P++
Sbjct: 386 SYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLEL--------------- 430
Query: 489 RIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRTSSSGHYVAWVKKPN 548
+ F S E + GQ P +N Y+L AV+ H+G T SGHY +++++
Sbjct: 431 DMTPFMASSKESRMNGQYQQPSD---SLHNDNKYSLFAVVNHQG-TLESGHYTSFIRQHK 486
Query: 549 GTWIKCDDDKVYPISEEEVLKLSG 572
W KCDD + S ++VL G
Sbjct: 487 DQWFKCDDAIITKASIKDVLDSEG 510
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 78 LMGSKEEDSMKEPVVKPKFVEDMNESERAVSLDLPAGLN---NLGNTCYMNAVIQCLKTV 134
+ G E+ S EP + + N R ++ + GL NLGNTC+MN ++Q L
Sbjct: 136 MTGVGEKYSTWEPTKRELELLQHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHT 195
Query: 135 PELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMKISPSISPFIMLQ 185
P LR + + + S P + + L++ + SP I P+ +L
Sbjct: 196 PLLRDFFLSDRHKCEMQS-PNSCLVCEMSTLFQEFYSGHRSPHI-PYRLLH 244
>sp|Q6DCJ1|UB22B_XENLA Ubiquitin carboxyl-terminal hydrolase 22-B OS=Xenopus laevis
GN=usp22-b PE=2 SV=2
Length = 523
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 151/384 (39%), Gaps = 51/384 (13%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL NLGNTC+MN ++Q L P LR + + + S P + + L++ +
Sbjct: 175 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQS-PNSCLVCEMSTLFQEFYSGH 233
Query: 252 ISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGEN---EEG 308
SP I P+ +L ++ + Y QQDA+E + +L G++ +
Sbjct: 234 RSPHI-PYRLLHLV------WTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKAN 286
Query: 309 QDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPGLKNKL 368
+ + I+Q F + +++ C T + F D+ LPG
Sbjct: 287 NPNHCNCIIDQIFTGGLQSDVTCQVCHGVSTT--IDPFW--------DISLDLPGSSTPF 336
Query: 369 QDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKDIKFPIEFD 428
SP D V + S VS LT RF E +AK+
Sbjct: 337 W----PLSPGSDAGVVNGE-SHVSGTTT-LTDCLRRFTRPEHLGSSAKIKCS-----GCH 385
Query: 429 AYELCTPELQAKLAPMREKFKIAEEKEAFEEFRTQYVFISIPMDEIYVRFGQKIYAPVGD 488
+Y+ T +L K P+ F + + + + R ++S P++
Sbjct: 386 SYQESTKQLTMKKLPIVACFHLKRFEHSAKLRRKITTYVSFPLEL--------------- 430
Query: 489 RIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRTSSSGHYVAWVKKPN 548
+ F S E + GQ P +N Y+L AV+ H+G T SGHY +++++
Sbjct: 431 DMMPFMASSKESRMNGQYQQPSD---SLHNDNKYSLFAVVNHQG-TLESGHYTSFIRQHK 486
Query: 549 GTWIKCDDDKVYPISEEEVLKLSG 572
W KCDD + S ++V+ G
Sbjct: 487 DQWFKCDDAIITKASIKDVIDSEG 510
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 78 LMGSKEEDSMKEPVVKPKFVEDMNESERAVSLDLPAGLN---NLGNTCYMNAVIQCLKTV 134
+ G E+ S EP + + N R ++ + GL NLGNTC+MN ++Q L
Sbjct: 136 MTGVGEKYSTWEPTKRELELLQHNPKRRKITTNCTIGLRGLINLGNTCFMNCIVQALTHT 195
Query: 135 PELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMKISPSISPFIMLQ 185
P LR + + + S P + + L++ + SP I P+ +L
Sbjct: 196 PLLRDFFLSDRHKCEMQS-PNSCLVCEMSTLFQEFYSGHRSPHI-PYRLLH 244
>sp|Q6P8X6|UBP50_MOUSE Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Mus musculus
GN=Usp50 PE=2 SV=1
Length = 390
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 49/262 (18%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLK--GGLQPGSNPAQSITASLRDLYECMDN 249
GL NLGNTCYMNA++QCL +V L + + K L+ + + A L M +
Sbjct: 46 GLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKYITALKKDCSEVTTAFAYL------MTD 99
Query: 250 MKI--SPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALP----- 302
M + S +SP I L + +++P F KT QQDA E ++ L AL
Sbjct: 100 MWLGDSDCVSPEIFLSAVGSLYPAFLKKT------QQDAQEFLIYVLNELHEALKKHCRR 153
Query: 303 --GENEEGQDSAK------SSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYIT 354
E GQ + +S I + F + + C + E+ T E F LS I
Sbjct: 154 RVNEKRTGQSCCRKVPAQETSIITRLFEGQLSYSITCLKCES--CTHKNEVFTILSLPIP 211
Query: 355 TDVKYMLPGLKNKLQ-----------DQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFV 403
+D + L++ LQ +QI + ++A V+T+ +S++P + F
Sbjct: 212 SDYE---CSLQDCLQCFFQQDTLTWSNQIYCSFCEIKQEAA-VRTT-ISKVPKIIVFHFK 266
Query: 404 RFFYKEKERINAKVLKDIKFPI 425
RF + + K+ DI +P+
Sbjct: 267 RF--DIQGTVKRKLRTDIHYPL 286
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 73 GSMVLLMGSKEEDSMKEPVVKPKFVEDMNESERAVSLDLPAGLNNLGNTCYMNAVIQCLK 132
G+ L + DS+ E +P F + V+ GL NLGNTCYMNA++QCL
Sbjct: 18 GAYYNLAECADYDSLPESKTQPHF--------QGVT-----GLRNLGNTCYMNAILQCLC 64
Query: 133 TVPELRKALKNLK--GGLQPGSNPAQSITASLRDLYECMDNMKISPSISPFIMLQGRYLP 190
+V L + + K L+ + + A L D+ +SP I F+ G P
Sbjct: 65 SVSPLVEYFLSGKYITALKKDCSEVTTAFAYLMTDMWLGDSDCVSPEI--FLSAVGSLYP 122
Query: 191 AGL 193
A L
Sbjct: 123 AFL 125
>sp|P53874|UBP10_YEAST Ubiquitin carboxyl-terminal hydrolase 10 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP10 PE=1
SV=2
Length = 792
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 522 YTLQAVLTHKGRTSSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLK 569
Y L +V+ H+GR+ SSGHY+A K+P+G+W DD+ + ISE +VLK
Sbjct: 674 YQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINIISERDVLK 721
Score = 32.7 bits (73), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 112 PAGLNNLGNTCYMNAVIQCLKTVPELRKAL 141
P GL N G TCY NA +Q + +P ++ L
Sbjct: 361 PRGLLNHGVTCYTNAAVQAMLHIPSIQHYL 390
Score = 32.7 bits (73), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 190 PAGLNNLGNTCYMNAVIQCLKTVPELRKAL 219
P GL N G TCY NA +Q + +P ++ L
Sbjct: 361 PRGLLNHGVTCYTNAAVQAMLHIPSIQHYL 390
>sp|C0HB46|UBP12_SALSA Ubiquitin carboxyl-terminal hydrolase 12 OS=Salmo salar GN=usp12
PE=2 SV=1
Length = 372
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 41/265 (15%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL N GNTCY N+V+Q L R+ + + QP +++ L DL+ + N K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKILAYRS--QP--RRKENLLTCLADLFHSIANQK 95
Query: 252 ISPSISP---FIM-LQVLHNVFPRFADKTDDGSYMQQDANECWTEMV------------- 294
+ P FI L+ + +F +YMQQDA+E ++
Sbjct: 96 RKVGVIPPKKFITRLRKENELF---------DNYMQQDAHEFLNYLLNTIADLLQEERKQ 146
Query: 295 -----RMLKTALPGENEEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQL 349
R+ +L +N S+++ + F + E +C ET + E F L
Sbjct: 147 DKTNGRLANGSLDSQNHNSNAPPPSTWVHEIFQGTLTNETRCLTCET--ISSKDEDFLDL 204
Query: 350 SCYI--TTDVKYMLPGLKN--KLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRF 405
S + T + + L G N L + K +V +LP L + RF
Sbjct: 205 SVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRF 264
Query: 406 FYKEKERINAKVLKDIKFPIEFDAY 430
Y E+ + K+ + FP+E +
Sbjct: 265 KYMEQLQRYTKLSYRVVFPLELRLF 289
Score = 39.7 bits (91), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 19/98 (19%)
Query: 475 YVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRT 534
Y + ++ P+ R+ F + G ++P R+ Y L AV+ H G
Sbjct: 273 YTKLSYRVVFPLELRL---------FNTSGDATNPERL---------YDLVAVVVHCGSG 314
Query: 535 SSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSG 572
+ GHY+A V K + W+ DDD V I + + + G
Sbjct: 315 PNRGHYIAIV-KSHDFWLLFDDDIVEKIDAQAIEEFYG 351
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 173
GL N GNTCY N+V+Q L R+ + + QP +++ L DL+ + N K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKILAYRS--QP--RRKENLLTCLADLFHSIANQK 95
Query: 174 ISPSISP 180
+ P
Sbjct: 96 RKVGVIP 102
>sp|E7F6T8|UBP37_DANRE Ubiquitin carboxyl-terminal hydrolase 37 OS=Danio rerio GN=usp37
PE=2 SV=1
Length = 937
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 36/289 (12%)
Query: 180 PFIMLQGRYLPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITAS 239
P ++ Q + G +NLGNTCYMNA++Q L ++P L LK G+ P I A
Sbjct: 311 PSVLAQPQPPLQGFSNLGNTCYMNAILQSLFSLPSFSNDL--LKQGIPWKRVP---INAL 365
Query: 240 LRDLYECMDNMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKT 299
LR + ISP +L+ + N A++ YMQ DA+E ++ + LK
Sbjct: 366 LRRFAHLLAKKDISPPEVKKDLLRRVKNAISSTAERF--SGYMQNDAHEFLSQCLDQLKE 423
Query: 300 ALPGENEEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQ--LSCYITTDV 357
+ N+ ++ + S ++ T + E+ S T P T E Q ++C +V
Sbjct: 424 DVEKINKSWKN--EPSAWDEPQSTRLADEVDTSRIYTCPVTVNMEFEVQHTITCKSCGEV 481
Query: 358 KYMLPGLKNKLQDQITKRSPSLDRDAVY------------------------VKTSKVSR 393
N L + +R +L ++ + K SR
Sbjct: 482 VLKREQF-NDLSIDLPRRRKTLPMRSIQDSLDLFFRMEEIEYSCEKCSGKAATVSHKFSR 540
Query: 394 LPAYLTIQFVRFFYKEKERINAKVLKDIKFPIEFDAYELCTPELQAKLA 442
LP L + R+ Y + +N+K+ + + P CT ++ L+
Sbjct: 541 LPRVLILHLKRYSYNTQLSLNSKLGQQVLIPKYLTLLSHCTDATRSPLS 589
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 173
G +NLGNTCYMNA++Q L ++P L LK G+ P I A LR +
Sbjct: 323 GFSNLGNTCYMNAILQSLFSLPSFSNDL--LKQGIPWKRVP---INALLRRFAHLLAKKD 377
Query: 174 ISP 176
ISP
Sbjct: 378 ISP 380
>sp|Q4R6D3|UBP50_MACFA Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca
fascicularis GN=USP50 PE=2 SV=1
Length = 373
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 191 AGLNNLGNTCYMNAVIQCLKTVPELRKALKNLK--GGLQPGSNPAQSITASLRDLYECMD 248
GL NLGNTCYMNA++QCL ++ L + + K LQ + + A L M
Sbjct: 44 TGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQNDCSEVATAFAYL------MT 97
Query: 249 NMKI--SPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTAL 301
+M + S +SP I L N++P F KT QQDA E ++ L AL
Sbjct: 98 DMWLGDSDCVSPEIFRSALGNLYPAFTKKT------QQDAQEFLIYVLNELHEAL 146
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 113 AGLNNLGNTCYMNAVIQCLKTVPEL 137
GL NLGNTCYMNA++QCL ++ L
Sbjct: 44 TGLRNLGNTCYMNAILQCLCSISPL 68
>sp|A4FUN7|UBP12_DANRE Ubiquitin carboxyl-terminal hydrolase 12A OS=Danio rerio GN=usp12a
PE=2 SV=1
Length = 371
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 40/264 (15%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL N GNTCY N+V+Q L R+ + + QP +++ L DL+ + N K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKILAYRS--QP--RRKENLLTCLADLFHSIANQK 95
Query: 252 ISPSISP---FIM-LQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGENEE 307
+ P FI L+ + +F +YMQQDA+E ++ + L E ++
Sbjct: 96 RKVGVIPPKKFITRLRKENELF---------DNYMQQDAHEFLNYLLNTIADLLQEERKQ 146
Query: 308 GQDSAK-----------------SSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLS 350
+ + K ++++ + F + E +C ET + E F LS
Sbjct: 147 DKQNGKLANGTLDSQNNNSTPPSTTWVHEIFQGTLTNETRCLTCET--ISSKDEDFLDLS 204
Query: 351 CYI--TTDVKYMLPGLKN--KLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFF 406
+ T + + L G N L + K +V +LP L + RF
Sbjct: 205 VDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFK 264
Query: 407 YKEKERINAKVLKDIKFPIEFDAY 430
Y E+ + K+ + FP+E +
Sbjct: 265 YMEQLQRYTKLSYRVVFPLELRLF 288
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 19/98 (19%)
Query: 475 YVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVLTHKGRT 534
Y + ++ P+ R+ F + G ++P R+ Y L AV+ H G
Sbjct: 272 YTKLSYRVVFPLELRL---------FNTSGDATNPERL---------YDLVAVVVHCGSG 313
Query: 535 SSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSG 572
+ GHY+A V K + W+ DDD V I + + + G
Sbjct: 314 PNRGHYIAIV-KSHDFWLLFDDDIVEKIDAQAIEEFYG 350
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 173
GL N GNTCY N+V+Q L R+ + + QP +++ L DL+ + N K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKILAYRS--QP--RRKENLLTCLADLFHSIANQK 95
Query: 174 ISPSISP 180
+ P
Sbjct: 96 RKVGVIP 102
>sp|Q9FPS4|UBP23_ARATH Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana
GN=UBP23 PE=2 SV=2
Length = 859
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 522 YTLQAVLTHKGRTSSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVL 568
YTL VL H GR+S SGHY +V+ +G W DD++V +SE+ V
Sbjct: 352 YTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVF 398
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 47/253 (18%)
Query: 187 RYLPAGLNNLGNTCYMNAVIQCLK-TVPELRKALKNLKGGLQPGSNPAQSITASLRDLYE 245
R + AGL NLGNTC++N+V+QCL T P L LQ ++ A L
Sbjct: 103 RKIGAGLQNLGNTCFLNSVLQCLTYTEP--------LAATLQTAAHQKYCHVAGFCALCA 154
Query: 246 CMDNMKISPS-----ISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVR-MLKT 299
+++ + ++P ++ L + F + Q+DA+E ++ M K
Sbjct: 155 IQKHVRTARQANGRILAPKDLVSNLRCISRNFRN------CRQEDAHEYMINLLECMHKC 208
Query: 300 ALP-GENEEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVK 358
+LP G E D+ + S + + F + +++KC + + + F LS I+
Sbjct: 209 SLPSGVPSESSDAYRRSLVHKIFGGSLRSQVKC--EQCSHCSNKFDPFLDLSLDISK--- 263
Query: 359 YMLPGLKNKLQDQITKRSPS--LDRDA-VY--------VKTSK---VSRLPAYLTIQFVR 404
+ LQ +++ + LD A VY VK K VS+ P LT+ R
Sbjct: 264 ------ADSLQRALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKR 317
Query: 405 FFYKEKERINAKV 417
F E+I+ KV
Sbjct: 318 FEAHRSEKIDRKV 330
Score = 39.7 bits (91), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 113 AGLNNLGNTCYMNAVIQCLKTVPELRKALK 142
AGL NLGNTC++N+V+QCL L L+
Sbjct: 107 AGLQNLGNTCFLNSVLQCLTYTEPLAATLQ 136
>sp|O75604|UBP2_HUMAN Ubiquitin carboxyl-terminal hydrolase 2 OS=Homo sapiens GN=USP2
PE=1 SV=2
Length = 605
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 191 AGLNNLGNTCYMNAVIQCLKTVPELRK-ALKNL-KGGLQPGSNPAQSITASLRDLYECMD 248
AGL NLGNTC+MN+++QCL ELR L+ L L GSN ++ L + +
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 326
Query: 249 NMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGE 304
+ +SP + PRF Y QQDA E +R L L E
Sbjct: 327 TSSPNDVVSPSEFKTQIQRYAPRFV------GYNQQDAQ----EFLRFLLDGLHNE 372
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 113 AGLNNLGNTCYMNAVIQCLKTVPELRK-ALKNL-KGGLQPGSNPAQSITASLRDLYECMD 170
AGL NLGNTC+MN+++QCL ELR L+ L L GSN ++ L + +
Sbjct: 267 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIW 326
Query: 171 NMKISPSISP--FIMLQGRYLP 190
+ +SP F RY P
Sbjct: 327 TSSPNDVVSPSEFKTQIQRYAP 348
Score = 39.7 bits (91), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 516 SNNSGYYTLQAVLTHKGRTSSSGHYVAWVKKP-NGTWIKCDDDKVYPISEEEV 567
+ N Y L AV H G T+ GHY A+ + P G W +D V P+S +V
Sbjct: 535 NTNHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQV 586
>sp|Q9QZL6|UBP21_MOUSE Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21
PE=1 SV=1
Length = 566
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRK-ALKNLKGGLQPGSNPAQSITASLRDLYECMDNM 250
GL NLGNTC++NAV+QCL + LR L+ PG AQ +T + D+ + +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272
Query: 251 KISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANE 288
+++P V P F+ Y QQDA E
Sbjct: 273 DSCEAVNPTRFRAVFQKYVPSFS------GYSQQDAQE 304
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRK-ALKNLKGGLQPGSNPAQSITASLRDLYECMDNM 172
GL NLGNTC++NAV+QCL + LR L+ PG AQ +T + D+ + +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272
Query: 173 KISPSISP--FIMLQGRYLPA 191
+++P F + +Y+P+
Sbjct: 273 DSCEAVNPTRFRAVFQKYVPS 293
>sp|Q9D9M2|UBP12_MOUSE Ubiquitin carboxyl-terminal hydrolase 12 OS=Mus musculus GN=Usp12
PE=2 SV=2
Length = 370
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 39/263 (14%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL N GNTCY N+V+Q L R+ + K QP +++ L DL+ + K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKS--QP--RKKENLLTCLADLFHSIATQK 95
Query: 252 ISPSISP---FIM-LQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGE--- 304
+ P FI L+ + +F +YMQQDA+E ++ + L E
Sbjct: 96 KKVGVIPPKKFITRLRKENELF---------DNYMQQDAHEFLNYLLNTIADILQEERKQ 146
Query: 305 -------------NEEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSC 351
NE+ + +++ + F + E +C ET + E F LS
Sbjct: 147 EKQNGRLRNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCET--ISSKDEDFLDLSV 204
Query: 352 YI--TTDVKYMLPGLKN--KLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFY 407
+ T + + L G N L + K KV +LP L + RF Y
Sbjct: 205 DVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKY 264
Query: 408 KEKERINAKVLKDIKFPIEFDAY 430
++ K+ + FP+E +
Sbjct: 265 MDQLHRYTKLSYRVVFPLELRLF 287
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 471 MDEI--YVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVL 528
MD++ Y + ++ P+ R+ F + G ++P R+ Y L AV+
Sbjct: 265 MDQLHRYTKLSYRVVFPLELRL---------FNTSGDATNPDRM---------YDLVAVV 306
Query: 529 THKGRTSSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSG 572
H G + GHY+A V K + W+ DDD V I + + + G
Sbjct: 307 VHCGSGPNRGHYIAIV-KSHDFWLLFDDDIVEKIDAQAIEEFYG 349
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 173
GL N GNTCY N+V+Q L R+ + K QP +++ L DL+ + K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKS--QP--RKKENLLTCLADLFHSIATQK 95
Query: 174 ISPSISP 180
+ P
Sbjct: 96 KKVGVIP 102
>sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21
PE=1 SV=1
Length = 565
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRK-ALKNLKGGLQPGSNPAQSITASLRDLYECMDNM 250
GL NLGNTC++NAV+QCL + LR L+ PG AQ +T + D+ + +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272
Query: 251 KISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANE 288
+++P V P F+ Y QQDA E
Sbjct: 273 DSCEAVNPTRFRAVFQKYVPSFS------GYSQQDAQE 304
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRK-ALKNLKGGLQPGSNPAQSITASLRDLYECMDNM 172
GL NLGNTC++NAV+QCL + LR L+ PG AQ +T + D+ + +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272
Query: 173 KISPSISP--FIMLQGRYLPA 191
+++P F + +Y+P+
Sbjct: 273 DSCEAVNPTRFRAVFQKYVPS 293
>sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus
GN=Usp21 PE=2 SV=1
Length = 565
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRK-ALKNLKGGLQPGSNPAQSITASLRDLYECMDNM 250
GL NLGNTC++NAV+QCL + LR L+ PG AQ +T + D+ + +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272
Query: 251 KISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANE 288
+++P V P F+ Y QQDA E
Sbjct: 273 DSCEAVNPTRFRAVFQKYVPSFS------GYSQQDAQE 304
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRK-ALKNLKGGLQPGSNPAQSITASLRDLYECMDNM 172
GL NLGNTC++NAV+QCL + LR L+ PG AQ +T + D+ + +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272
Query: 173 KISPSISP--FIMLQGRYLPA 191
+++P F + +Y+P+
Sbjct: 273 DSCEAVNPTRFRAVFQKYVPS 293
>sp|A5D9H7|UBP12_BOVIN Ubiquitin carboxyl-terminal hydrolase 12 OS=Bos taurus GN=USP12
PE=2 SV=1
Length = 369
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 101/262 (38%), Gaps = 38/262 (14%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL N GNTCY N+V+Q L R+ + K QP +S+ L DL+ + K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKS--QP--RKKESLLTCLADLFHSIATQK 95
Query: 252 ISPSISP---FIM-LQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGE--- 304
+ P FI L+ + +F +YMQQDA+E ++ + L E
Sbjct: 96 KKVGVIPPKKFITRLRKENELF---------DNYMQQDAHEFLNYLLNTIADILQEERKQ 146
Query: 305 ------------NEEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCY 352
+ E + +++ + F + E +C ET + E F LS
Sbjct: 147 EKQNGRLPNGNIDSENNSTPDPTWVHEIFQGTLTNETRCLTCET--ISSKDEDFLDLSVD 204
Query: 353 I--TTDVKYMLPGLKN--KLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYK 408
+ T + + L G N L + K KV +LP L + RF Y
Sbjct: 205 VEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYM 264
Query: 409 EKERINAKVLKDIKFPIEFDAY 430
++ K+ + FP+E +
Sbjct: 265 DQLHRYTKLSYRVVFPLELRLF 286
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 471 MDEI--YVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVL 528
MD++ Y + ++ P+ R+ F + G ++P R+ Y L AV+
Sbjct: 264 MDQLHRYTKLSYRVVFPLELRL---------FNTSGDATNPDRM---------YDLVAVV 305
Query: 529 THKGRTSSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSG 572
H G + GHY+A V K + W+ DDD V I + + + G
Sbjct: 306 VHCGSGPNRGHYIAIV-KSHDFWLLFDDDIVEKIDAQAIEEFYG 348
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 173
GL N GNTCY N+V+Q L R+ + K QP +S+ L DL+ + K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKS--QP--RKKESLLTCLADLFHSIATQK 95
Query: 174 ISPSISP 180
+ P
Sbjct: 96 KKVGVIP 102
>sp|Q9LEW0|UBP22_ARATH Ubiquitin carboxyl-terminal hydrolase 22 OS=Arabidopsis thaliana
GN=UBP22 PE=2 SV=1
Length = 557
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 148/412 (35%), Gaps = 107/412 (25%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQS-----ITASLRDLYEC 246
GLNNLG+TC+MNAV+Q L P LR L G P ++ + L ++
Sbjct: 178 GLNNLGSTCFMNAVLQALVHAPPLRNFW--LSGQHNRDLCPRRTMGLLCLPCDLDVIFSA 235
Query: 247 M---DNMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLK----- 298
M D SP+ H ++ + T+ +Y QQD++E + ++ +
Sbjct: 236 MFSGDRTPYSPA----------HLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHENEGK 285
Query: 299 -TALPGENEEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTD- 356
L +NEE Q +F + T + + +P + + ++ + D
Sbjct: 286 SKCLYQDNEECQCITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSMNGFSPADC 345
Query: 357 ----------VKYMLPGLKNKLQDQITKRSPSLDRDAVY-----------VKTSKVSRLP 395
V ++P L L RS L D K + RLP
Sbjct: 346 RKNRYSGGPSVNAIMPTLSGCLD--FFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLP 403
Query: 396 AYLTIQFVRFFYKEKERINAKVLKDIKFPIEFDAYELCTPELQAKLAPMREKFKIAEEKE 455
L + RF + + + K+ +++P + +P L + +
Sbjct: 404 LLLCLHVKRFEHSLTRKTSRKIDSYLQYPFRLNM----SPYLSSSI-------------- 445
Query: 456 AFEEFRTQYVFISIPMDEIYVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIG 515
I RFG +I+A G+ E+ S S +I
Sbjct: 446 ------------------IGKRFGNRIFAFDGE---------GEYDSSSSSSPSAEFEIF 478
Query: 516 SNNSGYYTLQAVLTHKGRTSSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEV 567
AV+THKG S GHYV +++ G W +CDD + + EE V
Sbjct: 479 ----------AVVTHKGMLES-GHYVTYLRL-KGLWYRCDDAWINEVEEEVV 518
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 20/25 (80%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELR 138
GLNNLG+TC+MNAV+Q L P LR
Sbjct: 178 GLNNLGSTCFMNAVLQALVHAPPLR 202
>sp|A3AF13|UBP26_ORYSJ Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
japonica GN=UBP26 PE=2 SV=2
Length = 1079
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Query: 507 SSPGRVDIG---SNNSGYYT--LQAVLTHKGRTSSSGHYVAWVK-KPNGTWIKCDDDKV 559
S PG++D+G SN S YT L A+L HKG ++SGHYVA VK + NG W + DD+ V
Sbjct: 322 SFPGQLDMGKRLSNPSSSYTYGLSAILIHKGSAANSGHYVAHVKDESNGQWWEFDDEHV 380
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 43/253 (16%)
Query: 190 PAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDN 249
PAGL NLG TCY N+++QCL R + + L+P + L L+ + +
Sbjct: 105 PAGLTNLGATCYANSILQCLYMNTSFRLGIFS----LEPDILKMHPVLDQLARLFAQLHS 160
Query: 250 MKIS-PSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGENEEG 308
K++ +PFI L D+G +QQD++E T + +L+ +L G
Sbjct: 161 SKMAFIDSAPFIKTLEL-----------DNG--VQQDSHEFLTLFLSLLEGSLSHSKVPG 207
Query: 309 QDSAKSSFIEQYFYTIMDTELKCSES--ETEPPTKGTESFQQLSCYITTDVKYMLPGLKN 366
+ ++ F + +CS ++E +K E F +L I L L+
Sbjct: 208 ----ARTIVQHLFRGSVSHVTRCSSCGRDSEASSK-MEDFYELELNIKG-----LNNLEQ 257
Query: 367 KLQDQITKRSPSLDRDAVY-----------VKTSKVSRLPAYLTIQFVRFFYKEKERINA 415
L D ++ + +LD + Y + K+ LP + Q R+ + K
Sbjct: 258 SLDDYLS--TEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRYVFLPKTTTKK 315
Query: 416 KVLKDIKFPIEFD 428
K+ FP + D
Sbjct: 316 KISSAFSFPGQLD 328
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 108 SLDLPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLK 145
S + PAGL NLG TCY N+++QCL R + +L+
Sbjct: 101 STETPAGLTNLGATCYANSILQCLYMNTSFRLGIFSLE 138
>sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
indica GN=UBP26 PE=2 SV=1
Length = 1079
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Query: 507 SSPGRVDIG---SNNSGYYT--LQAVLTHKGRTSSSGHYVAWVK-KPNGTWIKCDDDKV 559
S PG++D+G SN S YT L A+L HKG ++SGHYVA VK + NG W + DD+ V
Sbjct: 322 SFPGQLDMGKRLSNPSSSYTYGLSAILIHKGSAANSGHYVAHVKDESNGQWWEFDDEHV 380
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 43/253 (16%)
Query: 190 PAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDN 249
PAGL NLG TCY N+++QCL R + + L+P + L L+ + +
Sbjct: 105 PAGLTNLGATCYANSILQCLYMNTSFRLGIFS----LEPDILKMHPVLDQLARLFAQLHS 160
Query: 250 MKIS-PSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGENEEG 308
K++ +PFI L D+G +QQD++E T + +L+ +L G
Sbjct: 161 SKMAFIDSAPFIKTLEL-----------DNG--VQQDSHEFLTLFLSLLEGSLSHSKVPG 207
Query: 309 QDSAKSSFIEQYFYTIMDTELKCSES--ETEPPTKGTESFQQLSCYITTDVKYMLPGLKN 366
+ ++ F + +CS ++E +K E F +L I L L+
Sbjct: 208 ----ARTIVQHLFRGSVSHVTRCSSCGRDSEASSK-MEDFYELELNIKG-----LNNLEQ 257
Query: 367 KLQDQITKRSPSLDRDAVY-----------VKTSKVSRLPAYLTIQFVRFFYKEKERINA 415
L D ++ + +LD + Y + K+ LP + Q R+ + K
Sbjct: 258 SLDDYLS--TEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRYVFLPKTTTKK 315
Query: 416 KVLKDIKFPIEFD 428
K+ FP + D
Sbjct: 316 KISSAFSFPGQLD 328
Score = 40.4 bits (93), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 108 SLDLPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLK 145
S + PAGL NLG TCY N+++QCL R + +L+
Sbjct: 101 STETPAGLTNLGATCYANSILQCLYMNTSFRLGIFSLE 138
>sp|O75317|UBP12_HUMAN Ubiquitin carboxyl-terminal hydrolase 12 OS=Homo sapiens GN=USP12
PE=1 SV=2
Length = 370
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 103/263 (39%), Gaps = 39/263 (14%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL N GNTCY N+V+Q L R+ + K QP +S+ L DL+ + K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKS--QP--RKKESLLTCLADLFHSIATQK 95
Query: 252 ISPSISP---FIM-LQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGENEE 307
+ P FI L+ + +F +YMQQDA+E ++ + L E ++
Sbjct: 96 KKVGVIPPKKFITRLRKENELF---------DNYMQQDAHEFLNYLLNTIADILQEERKQ 146
Query: 308 GQDSAK----------------SSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSC 351
+ + + +++ + F + E +C ET + E F LS
Sbjct: 147 EKQNGRLPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCET--ISSKDEDFLDLSV 204
Query: 352 YI--TTDVKYMLPGLKN--KLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFY 407
+ T + + L G N L + K KV +LP L + RF Y
Sbjct: 205 DVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKY 264
Query: 408 KEKERINAKVLKDIKFPIEFDAY 430
++ K+ + FP+E +
Sbjct: 265 MDQLHRYTKLSYRVVFPLELRLF 287
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 471 MDEI--YVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVL 528
MD++ Y + ++ P+ R+ F + G ++P R+ Y L AV+
Sbjct: 265 MDQLHRYTKLSYRVVFPLELRL---------FNTSGDATNPDRM---------YDLVAVV 306
Query: 529 THKGRTSSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSG 572
H G + GHY+A V K + W+ DDD V I + + + G
Sbjct: 307 VHCGSGPNRGHYIAIV-KSHDFWLLFDDDIVEKIDAQAIEEFYG 349
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 173
GL N GNTCY N+V+Q L R+ + K QP +S+ L DL+ + K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKS--QP--RKKESLLTCLADLFHSIATQK 95
Query: 174 ISPSISP 180
+ P
Sbjct: 96 KKVGVIP 102
>sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21
PE=2 SV=1
Length = 565
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRK-ALKNLKGGLQPGSNPAQSITASLRDLYECMDNM 250
GL NLGNTC++NA++QCL + LR L+ PG AQ +T + D+ + +
Sbjct: 213 GLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272
Query: 251 KISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANE 288
+++P V P F+ Y QQDA E
Sbjct: 273 DSCEAVNPTRFRAVFQKYVPSFS------GYSQQDAQE 304
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRK-ALKNLKGGLQPGSNPAQSITASLRDLYECMDNM 172
GL NLGNTC++NA++QCL + LR L+ PG AQ +T + D+ + +
Sbjct: 213 GLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272
Query: 173 KISPSISP--FIMLQGRYLPA 191
+++P F + +Y+P+
Sbjct: 273 DSCEAVNPTRFRAVFQKYVPS 293
>sp|Q60MK8|UBP7_CAEBR Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis briggsae
GN=usp-7 PE=3 SV=1
Length = 1129
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 111/264 (42%), Gaps = 50/264 (18%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL N G TCYMN+++Q R+A+ N++ G +P N + + A R YE ++
Sbjct: 191 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMEVGTEP--NESNIVLAMQRVFYE----LQ 244
Query: 252 ISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGENEEGQDS 311
+S S + L F DK D ++ Q D E ++ L+T + G +EE
Sbjct: 245 MS---SEAVETNSLTRAFG--WDKLD--AFNQHDVQEFCRVLLDNLETKMKGTSEEKS-- 295
Query: 312 AKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVKYMLPGLKNKLQDQ 371
I F M + +KC + + E + TESF DV+ + G+ + +
Sbjct: 296 -----IPNLFRGNMKSYIKCLDVDYE--SSRTESFY--------DVQLNVLGMDSLERAF 340
Query: 372 ITKRSP-SLDRDAVY----------VKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKD 420
+P +LD D Y K K LP L +Q +RF Y E+ K+ +
Sbjct: 341 DAYTTPETLDDDNKYDAGDHGLQRAEKGVKFVELPPVLHVQLMRFQYCGVEQ---KINER 397
Query: 421 IKFPIEFDAYELCTPELQAKLAPM 444
FP + + C +L PM
Sbjct: 398 FSFPEKMNLSNCC------ELGPM 415
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYE 167
GL N G TCYMN+++Q R+A+ N++ G +P N + + A R YE
Sbjct: 191 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMEVGTEP--NESNIVLAMQRVFYE 242
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 522 YTLQAVLTHKGRTSSSGHYVAWVK--------KPNGT--WIKCDDDKVYPISEEEVLKLS 571
Y+L AVL H G GHYV ++ P T W K DDD V + ++ + +
Sbjct: 423 YSLHAVLVHSGEFHG-GHYVTYINVNLHESAVDPTATAKWCKFDDDVVSRTTTDDAIVSN 481
Query: 572 GGGK 575
GG+
Sbjct: 482 FGGE 485
>sp|O57429|UBP2_CHICK Ubiquitin carboxyl-terminal hydrolase 2 OS=Gallus gallus GN=USP2
PE=2 SV=1
Length = 357
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 191 AGLNNLGNTCYMNAVIQCLKTVPELRK-ALKN-LKGGLQPGSNPAQSITASLRDLYECMD 248
GL NLGNTC+MN+++QCL ELR L+N L S ++ + L + +
Sbjct: 19 TGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLW 78
Query: 249 NMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGE 304
+ S+SP + PRF Y QQDA E +R L L GE
Sbjct: 79 TSSPNDSVSPSEFKTQIQRYAPRFV------GYNQQDAQ----EFLRFLLDGLHGE 124
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 113 AGLNNLGNTCYMNAVIQCLKTVPELR 138
GL NLGNTC+MN+++QCL ELR
Sbjct: 19 TGLRNLGNTCFMNSILQCLSNTKELR 44
Score = 40.0 bits (92), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 516 SNNSGYYTLQAVLTHKGRTSSSGHYVAWVKKP-NGTWIKCDDDKVYPISEEEV 567
S N Y L AV H G T+ GHY A+ K P + W +D +V P+S V
Sbjct: 287 SCNHAVYNLYAVSNHSG-TTMGGHYTAYCKSPISSEWHSFNDSRVTPMSSSHV 338
>sp|Q52KZ6|UB12A_XENLA Ubiquitin carboxyl-terminal hydrolase 12-A OS=Xenopus laevis
GN=usp12-a PE=2 SV=1
Length = 370
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 103/263 (39%), Gaps = 39/263 (14%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL N GNTCY N+V+Q L R+ + K QP +++ L DL+ + K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKS--QP--RKKENLLTCLSDLFHSIATQK 95
Query: 252 ISPSISP---FIM-LQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGENEE 307
+ P FI L+ + +F +YMQQDA+E ++ + L E ++
Sbjct: 96 KKVGVIPPKKFITRLRKENELF---------DNYMQQDAHEFLNYLLNTIADILQEERKQ 146
Query: 308 GQDSAK----------------SSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSC 351
+ + + +++ + F + E +C ET + E F LS
Sbjct: 147 EKQNGRIPNGNIDNENNNSAPDPTWVHEIFQGTLTNETRCLTCET--ISSKDEDFLDLSV 204
Query: 352 YI--TTDVKYMLPGLKN--KLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFY 407
+ T + + L G N L + K KV +LP L + RF Y
Sbjct: 205 DVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKY 264
Query: 408 KEKERINAKVLKDIKFPIEFDAY 430
++ K+ + FP+E +
Sbjct: 265 MDQLHRYTKLSYRVVFPLELRLF 287
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 471 MDEI--YVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVL 528
MD++ Y + ++ P+ R+ F + G ++P R+ Y L AV+
Sbjct: 265 MDQLHRYTKLSYRVVFPLELRL---------FNTSGDATNPDRM---------YDLVAVV 306
Query: 529 THKGRTSSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSG 572
H G + GHY+A VK + W+ DDD V I + + + G
Sbjct: 307 VHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYG 349
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 173
GL N GNTCY N+V+Q L R+ + K QP +++ L DL+ + K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKS--QP--RKKENLLTCLSDLFHSIATQK 95
Query: 174 ISPSISP 180
+ P
Sbjct: 96 KKVGVIP 102
>sp|A6QNM7|UBP33_BOVIN Ubiquitin carboxyl-terminal hydrolase 33 OS=Bos taurus GN=USP33
PE=2 SV=1
Length = 912
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 110/274 (40%), Gaps = 32/274 (11%)
Query: 184 LQGRYLPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDL 243
L+ R L GL N+GNTCYMNA +Q L P L + + G + PA I S L
Sbjct: 148 LKARGL-TGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPA--ICKSYLKL 204
Query: 244 YECMDNMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPG 303
+ + S+ P + Q + V P F Y QQDA E ++ +L L
Sbjct: 205 MTELWHKSRPGSVVPTTLFQGIKTVNPTFR------GYSQQDAQEFLRCLMDLLHEELKE 258
Query: 304 ENEEGQDSAKSSFIEQYF---YTIMDTELK----CSESETEPPTKGTESFQQLSCYITTD 356
+ E ++ ++ E+ + D + + CS S+ G+ SF + + T
Sbjct: 259 QVMEVEEDPQTIMTEETMEEDKSQSDVDFQSCESCSSSDKAENENGSRSFSEDNNETTML 318
Query: 357 VK-----------YMLPGLKNKLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRF 405
++ + + NK+ ++ DRD+V S+ + L T++ V+
Sbjct: 319 IQDDENNSEMSKDWQKEKMCNKINKVHSEGELDKDRDSV----SETADLNNQETVK-VQI 373
Query: 406 FYKEKERINAKVLKDIKFPIEFDAYELCTPELQA 439
+ E I L D+ P + E P L A
Sbjct: 374 HSRASEYITDVHLNDLSTPQILPSNEGVNPRLSA 407
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 113 AGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNM 172
GL N+GNTCYMNA +Q L P L + + G + PA I S L + +
Sbjct: 154 TGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPA--ICKSYLKLMTELWHK 211
Query: 173 KISPSISPFIMLQG 186
S+ P + QG
Sbjct: 212 SRPGSVVPTTLFQG 225
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 522 YTLQAVLTHKGRTSSSGHYVAWVKKP-NGTWIKCDDDKVYPISEEEV 567
Y L +V+ H G T+SSGHY+A+ + N W + DD V +SE V
Sbjct: 627 YDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTV 672
>sp|Q5M981|UB12B_XENLA Ubiquitin carboxyl-terminal hydrolase 12-B OS=Xenopus laevis
GN=usp12-b PE=2 SV=2
Length = 370
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 103/263 (39%), Gaps = 39/263 (14%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 251
GL N GNTCY N+V+Q L R+ + K QP +++ L DL+ + K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKS--QP--RKKENLLTCLSDLFHSIATQK 95
Query: 252 ISPSISP---FIM-LQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGENEE 307
+ P FI L+ + +F +YMQQDA+E ++ + L E ++
Sbjct: 96 KKVGVIPPKKFITRLRKENELF---------DNYMQQDAHEFLNYLLNTIADILQEERKQ 146
Query: 308 GQDSAK----------------SSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSC 351
+ + + +++ + F + E +C ET + E F LS
Sbjct: 147 EKQNGRIPNGNIDNENNNNTPDPTWVHEIFQGTLTNETRCLTCET--ISSKDEDFLDLSV 204
Query: 352 YI--TTDVKYMLPGLKN--KLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFY 407
+ T + + L G N L + K KV +LP L + RF Y
Sbjct: 205 DVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKY 264
Query: 408 KEKERINAKVLKDIKFPIEFDAY 430
++ K+ + FP+E +
Sbjct: 265 MDQLHRYTKLSYRVVFPLELRLF 287
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 21/104 (20%)
Query: 471 MDEI--YVRFGQKIYAPVGDRIQDFGVKSTEFQSRGQGSSPGRVDIGSNNSGYYTLQAVL 528
MD++ Y + ++ P+ R+ F + G ++P R+ Y L AV+
Sbjct: 265 MDQLHRYTKLSYRVVFPLELRL---------FNTSGDATNPDRM---------YDLVAVV 306
Query: 529 THKGRTSSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVLKLSG 572
H G + GHY+A VK + W+ DDD V I + + + G
Sbjct: 307 VHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYG 349
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNMK 173
GL N GNTCY N+V+Q L R+ + K QP +++ L DL+ + K
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKS--QP--RKKENLLTCLSDLFHSIATQK 95
Query: 174 ISPSISP 180
+ P
Sbjct: 96 KKVGVIP 102
>sp|Q2KHV7|UBP2_BOVIN Ubiquitin carboxyl-terminal hydrolase 2 OS=Bos taurus GN=USP2 PE=2
SV=1
Length = 606
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 16/118 (13%)
Query: 191 AGLNNLGNTCYMNAVIQCLKTVPELRK-ALKNLKGGLQPGSNPAQSITASLRDLYECMDN 249
AGL NLGNTC+MN+++QCL ELR L+ L L+ S+ +++ TA + + + +
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLY--LRDLSHSSRAHTALMEEFAKLIQT 325
Query: 250 MKISPS---ISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGE 304
+ S +SP + PRF Y QQDA E +R L L E
Sbjct: 326 IWTSSPNDVVSPSEFKTQIQRYAPRFV------GYNQQDAQ----EFLRFLLDGLHNE 373
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 113 AGLNNLGNTCYMNAVIQCLKTVPELR 138
AGL NLGNTC+MN+++QCL ELR
Sbjct: 268 AGLRNLGNTCFMNSILQCLSNTRELR 293
>sp|O74442|UBP16_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp16 PE=1 SV=1
Length = 457
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 517 NNSGYYTLQAVLTHKGRTSSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVL 568
N S +Y L VL H G ++ SGHY ++ K NG W+K DDD V S + VL
Sbjct: 366 NCSCWYELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVL 417
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 25/247 (10%)
Query: 192 GLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDN-- 249
GL NLGNTC+MN+V+Q + P L + L + + L N A + + + N
Sbjct: 126 GLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSLSCRMN-ACVLCRMEQHVARAYPNKG 184
Query: 250 MKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRML-KTALPGENEEG 308
K + + P + +L + F Y Q+DA+E +V K+ L
Sbjct: 185 TKRASAFKPSGIQSMLKVISSHFRP------YRQEDAHEFMRYLVDAWQKSCLQNHKNLD 238
Query: 309 QDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVK--YMLPGLKN 366
S ++S + + F + ++ CS + K + ++Q L ++ D K + LK+
Sbjct: 239 HPSRETSVVHRIFGGYLRQQILCSVCK-----KPSNTYQAL-LDLSVDAKGSSLADSLKH 292
Query: 367 -----KLQDQITKRSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYKEKERINAKVLKDI 421
KL Q R + + K + R P LTI F RF + + ++K+ K I
Sbjct: 293 FVHAEKLTKQNKYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQ--SSKISKQI 350
Query: 422 KFPIEFD 428
+P F+
Sbjct: 351 SYPESFN 357
Score = 36.2 bits (82), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 114 GLNNLGNTCYMNAVIQCLKTVPELRKAL 141
GL NLGNTC+MN+V+Q + P L + L
Sbjct: 126 GLVNLGNTCFMNSVLQLMTQTPPLVQYL 153
>sp|Q9NVE5|UBP40_HUMAN Ubiquitin carboxyl-terminal hydrolase 40 OS=Homo sapiens GN=USP40
PE=2 SV=3
Length = 1235
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 105/265 (39%), Gaps = 50/265 (18%)
Query: 191 AGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNM 250
+G+ N G TCY+N+++Q L PE R+AL +L G + G L+E D
Sbjct: 41 SGIRNQGGTCYLNSLLQTLHFTPEFREALFSL-GPEELG-------------LFEDKDKP 86
Query: 251 KISPSISP------FIMLQVLHNVFPRFADKTDDGSYM------QQDANECWTEMVRMLK 298
I P F L +L AD TD + Q D E + L+
Sbjct: 87 DAKVRIIPLQLQRLFAQLLLLDQEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALE 146
Query: 299 TALPGENEEGQDSAKSSFIEQYFYTIMDTELKCSESETEPPTKGTESFQQLSCYITTDVK 358
T+L G + G D I + ++ + ++ C E + ++ E F L+ +
Sbjct: 147 TSLVGTS--GHD-----LIYRLYHGTIVNQIVCKECKN--VSERQEDFLDLTVAVKN--- 194
Query: 359 YMLPGLKNKLQDQITK----------RSPSLDRDAVYVKTSKVSRLPAYLTIQFVRFFYK 408
+ GL++ L + + + DR K++K+ +LP +LT+ +RF +
Sbjct: 195 --VSGLEDALWNMYVEEEVFDCDNLYHCGTCDRLVKAAKSAKLRKLPPFLTVSLLRFNFD 252
Query: 409 EKERINAKVLKDIKFPIEFDAYELC 433
+ K FP+ + C
Sbjct: 253 FVKCERYKETSCYTFPLRINLKPFC 277
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 113 AGLNNLGNTCYMNAVIQCLKTVPELRKALKNL 144
+G+ N G TCY+N+++Q L PE R+AL +L
Sbjct: 41 SGIRNQGGTCYLNSLLQTLHFTPEFREALFSL 72
>sp|Q9FPS3|UBP24_ARATH Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis thaliana
GN=UBP24 PE=1 SV=1
Length = 551
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 516 SNNSGYYTLQAVLTHKGRTSSSGHYVAWVKKPNGTWIKCDDDKVYPISEEEVL 568
SN S Y L A +TH G S GHY ++ NG W++ DD V PI + VL
Sbjct: 487 SNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVL 539
>sp|Q28CN3|UBP33_XENTR Ubiquitin carboxyl-terminal hydrolase 33 OS=Xenopus tropicalis
GN=usp33 PE=2 SV=1
Length = 892
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 191 AGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPA--QSITASLRDLYECMD 248
GL N+GNTCYMNA +Q L P L + G + PA +S + D++
Sbjct: 148 TGLKNIGNTCYMNAALQALSNCPPLTHYFLDCGGLARTDKKPALCKSYQKLMSDIWH--- 204
Query: 249 NMKISPS-ISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPGENEE 307
K P + P + Q + +V P F Y QQDA E ++ +L L + E
Sbjct: 205 --KNRPGFVIPTNLFQGIKSVNPTFR------GYSQQDAQEFLRCLMDVLHEELKEQIVE 256
Query: 308 GQDSAKSSFIEQ 319
++ A++ +E+
Sbjct: 257 VEEDAQTGIVEE 268
Score = 40.0 bits (92), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 113 AGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPA 155
GL N+GNTCYMNA +Q L P L + G + PA
Sbjct: 148 TGLKNIGNTCYMNAALQALSNCPPLTHYFLDCGGLARTDKKPA 190
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 522 YTLQAVLTHKGRTSSSGHYVAWVKKP-NGTWIKCDDDKVYPISEEEV 567
Y L +V+ H G T+SSGHY+A+ + N W + DD V +SE V
Sbjct: 607 YDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSEATV 652
>sp|Q8TEY7|UBP33_HUMAN Ubiquitin carboxyl-terminal hydrolase 33 OS=Homo sapiens GN=USP33
PE=1 SV=2
Length = 942
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 184 LQGRYLPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDL 243
L+ R L GL N+GNTCYMNA +Q L P L + + G + PA I S L
Sbjct: 179 LRARGL-TGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPA--ICKSYLKL 235
Query: 244 YECMDNMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTAL 301
+ + S+ P + Q + V P F Y QQDA E ++ +L L
Sbjct: 236 MTELWHKSRPGSVVPTTLFQGIKTVNPTFR------GYSQQDAQEFLRCLMDLLHEEL 287
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 113 AGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNM 172
GL N+GNTCYMNA +Q L P L + + G + PA I S L + +
Sbjct: 185 TGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPA--ICKSYLKLMTELWHK 242
Query: 173 KISPSISPFIMLQG 186
S+ P + QG
Sbjct: 243 SRPGSVVPTTLFQG 256
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 522 YTLQAVLTHKGRTSSSGHYVAWVKKP-NGTWIKCDDDKVYPISEEEV 567
Y L +V+ H G T+SSGHY+A+ + N W + DD V +SE V
Sbjct: 657 YDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTV 702
>sp|Q9FKP5|UBP17_ARATH Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana
GN=UBP17 PE=2 SV=1
Length = 731
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 508 SPGRVDIGSNNSGYYTLQAVLTHKGRTSS--SGHYVAWVKKPNGTWIKCDDDKVYPISEE 565
SP D + Y+L AV+ H S+ SGHYV ++K +G W K DD V+P+ E
Sbjct: 559 SPYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLE 618
Query: 566 EVL 568
VL
Sbjct: 619 TVL 621
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 112 PAGLNNLGNTCYMNAVIQCL 131
P GL NLGN+CY NAV+QCL
Sbjct: 328 PFGLVNLGNSCYANAVLQCL 347
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 190 PAGLNNLGNTCYMNAVIQCL 209
P GL NLGN+CY NAV+QCL
Sbjct: 328 PFGLVNLGNSCYANAVLQCL 347
>sp|Q5REG5|UBP33_PONAB Ubiquitin carboxyl-terminal hydrolase 33 OS=Pongo abelii GN=USP33
PE=2 SV=1
Length = 914
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 184 LQGRYLPAGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDL 243
L+ R L GL N+GNTCYMNA +Q L P L + + G + PA I S L
Sbjct: 148 LRARGL-TGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPA--ICKSYLKL 204
Query: 244 YECMDNMKISPSISPFIMLQVLHNVFPRFADKTDDGSYMQQDANECWTEMVRMLKTALPG 303
+ + S+ P + Q + V P F Y QQDA E ++ +L L
Sbjct: 205 MTELWHKSRPGSVVPTNLFQGIKTVNPTFR------GYSQQDAQEFLRCLMDLLHEELKE 258
Query: 304 ENEEGQD 310
+ E +D
Sbjct: 259 QVMEVED 265
Score = 40.4 bits (93), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 113 AGLNNLGNTCYMNAVIQCLKTVPELRKALKNLKGGLQPGSNPAQSITASLRDLYECMDNM 172
GL N+GNTCYMNA +Q L P L + + G + PA I S L + +
Sbjct: 154 TGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPA--ICKSYLKLMTELWHK 211
Query: 173 KISPSISPFIMLQG 186
S+ P + QG
Sbjct: 212 SRPGSVVPTNLFQG 225
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 522 YTLQAVLTHKGRTSSSGHYVAWVKKP-NGTWIKCDDDKVYPISEEEV 567
Y L +V+ H G T+SSGHY+A+ + N W + DD V +SE V
Sbjct: 625 YDLLSVICHHG-TASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTV 670
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 218,808,408
Number of Sequences: 539616
Number of extensions: 9423030
Number of successful extensions: 24621
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 23611
Number of HSP's gapped (non-prelim): 943
length of query: 577
length of database: 191,569,459
effective HSP length: 123
effective length of query: 454
effective length of database: 125,196,691
effective search space: 56839297714
effective search space used: 56839297714
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)