Diaphorina citri psyllid: psy7718


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180----
MDSDSDSEVPDLVPAELQPVPVTIITGYLGAGKTTLLNYILTEQHDKKIAVILNEFGEGSAMEKSVSVGDNGNLYEEWLELKNGCLCCSVKDNGVKAIENLMLKRGKFDYILLETTGLADPGPIAKVFWLDKELGSDIYLDGIVTVVDCKHTIDVSFPDYFSIYLSILLSRLKELKVEQVHFFN
cccccccccccccccccccccEEEEEccccccHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccEEEEcccCEEEEEccHHHHHHHHHHHHcccccEEEEECcccccccccHEEEcccccccccEEEcCEEEEEEcccccccccccHHHHHHHHHHHHccccccccccccc
****************LQPVPVTIITGYLGAGKTTLLNYILTEQHDKKIAVILNEFGEGSAMEKSVSVGDNGNLYEEWLELKNGCLCCSVKDNGVKAIENLMLKRGKFDYILLETTGLADPGPIAKVFWLDKELGSDIYLDGIVTVVDCKHTIDVSFPDYFSIYLSILLSRLKELKVEQVHFFN
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MDSDSDSEVPDLVPAELQPVPVTIITGYLGAGKTTLLNYILTEQHDKKIAVILNEFGEGSAMEKSVSVGDNGNLYEEWLELKNGCLCCSVKDNGVKAIENLMLKRGKFDYILLETTGLADPGPIAKVFWLDKELGSDIYLDGIVTVVDCKHTIDVSFPDYFSIYLSILLSRLKELKVEQVHFFN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
COBW domain-containing protein 6 confidentQ4V339
COBW domain-containing protein 1 confidentQ8VEH6
COBW domain-containing protein 1 confidentQ99MB4

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005524 [MF]ATP bindingprobableGO:0043168, GO:0003674, GO:0005488, GO:0030554, GO:0035639, GO:0097159, GO:1901363, GO:0043167, GO:0036094, GO:0032553, GO:0032559, GO:0001883, GO:0032549, GO:0032555, GO:0017076, GO:0000166, GO:0032550, GO:1901265, GO:0001882
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1NIJ, chain A
Confidence level:very confident
Coverage over the Query: 18-154
View the alignment between query and template
View the model in PyMOL