Query psy7721
Match_columns 160
No_of_seqs 103 out of 198
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 17:09:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7721.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7721hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g9j_C Synthetic peptide, seri 50.9 3.1 0.0001 22.3 -0.1 16 101-116 8-23 (26)
2 3t2c_A Fructose-1,6-bisphospha 10.1 1.9E+02 0.0066 24.9 3.1 31 90-123 298-328 (407)
3 3r1m_A Putative uncharacterize 10.0 2.5E+02 0.0087 24.1 3.8 31 90-123 288-318 (385)
4 1r6x_A ATP:sulfate adenylyltra 8.9 1.1E+02 0.0036 26.4 1.1 8 96-103 190-197 (395)
5 1x6v_B Bifunctional 3'-phospho 8.5 1.2E+02 0.004 27.7 1.2 8 96-103 415-422 (630)
6 1hh2_P NUSA, N utilization sub 8.0 1.5E+02 0.0051 25.0 1.6 24 136-159 321-344 (344)
7 3cr8_A Sulfate adenylyltranfer 7.1 1.4E+02 0.0048 26.5 1.1 8 96-103 166-173 (552)
8 3qil_A Clathrin heavy chain 1; 6.9 1.1E+02 0.0038 22.4 0.3 45 101-153 16-61 (125)
9 1g8f_A Sulfate adenylyltransfe 6.7 1.6E+02 0.0055 25.9 1.2 8 96-103 191-198 (511)
10 2asb_A Transcription elongatio 6.6 1.9E+02 0.0066 23.3 1.6 23 136-158 202-224 (251)
No 1
>4g9j_C Synthetic peptide, serine/threonine-protein phosphatase PP1-alpha Ca subunit; activating peptide; 3.10A {Homo sapiens}
Probab=50.90 E-value=3.1 Score=22.26 Aligned_cols=16 Identities=38% Similarity=0.540 Sum_probs=12.3
Q ss_pred cccCcEEEEEeccccc
Q psy7721 101 ARNNARVVFSGSLYFF 116 (160)
Q Consensus 101 arNNARv~~~GS~d~f 116 (160)
-|.||||+|.-..|+.
T Consensus 8 krknarvtfaeaaeii 23 (26)
T 4g9j_C 8 KRKNARVTFAEAAEII 23 (26)
T ss_pred ccccceeeHHHhhhHh
Confidence 4789999998766653
No 2
>3t2c_A Fructose-1,6-bisphosphate aldolase/phosphatase; (beta/alpha)8 TIM barrel, FBP, F6P, DHAP, GAP, phosphorylati lyase, hydrolase; HET: 13P; 1.30A {Thermoproteus neutrophilus} PDB: 3t2b_A* 3t2d_A* 3t2e_A* 3t2f_A 3t2g_A*
Probab=10.08 E-value=1.9e+02 Score=24.88 Aligned_cols=31 Identities=23% Similarity=0.393 Sum_probs=25.6
Q ss_pred ccceeEEEEEecccCcEEEEEecccccccccccc
Q psy7721 90 GKNTVLVAALQARNNARVVFSGSLYFFSNEAFNS 123 (160)
Q Consensus 90 G~q~~LVsa~QarNNARv~~~GS~d~fSd~~f~~ 123 (160)
|--.....|||-.| .| ++|-.|||.|..|+.
T Consensus 298 GPPrV~alGFql~~-Gk--LiGP~DlFdDpafD~ 328 (407)
T 3t2c_A 298 GPPKVGALGFQLHE-GY--LEGGVDLFDDPAFDY 328 (407)
T ss_dssp CCCEEEEEEEEEET-TE--EEEEEETTCSHHHHH
T ss_pred CCCeEEEEEEEeec-CE--EccCccccCCcchhH
Confidence 66678889999964 45 579999999999986
No 3
>3r1m_A Putative uncharacterized protein ST0318; sulfolobus fructose-1,6-bisphosphatase-like fold, hydrolase/ Mg binding, metal binding protein; 1.50A {Sulfolobus tokodaii} PDB: 1umg_A*
Probab=10.02 E-value=2.5e+02 Score=24.08 Aligned_cols=31 Identities=26% Similarity=0.518 Sum_probs=25.3
Q ss_pred ccceeEEEEEecccCcEEEEEecccccccccccc
Q psy7721 90 GKNTVLVAALQARNNARVVFSGSLYFFSNEAFNS 123 (160)
Q Consensus 90 G~q~~LVsa~QarNNARv~~~GS~d~fSd~~f~~ 123 (160)
|--.....|||-. +.| ++|-.|||.|..|+.
T Consensus 288 gpPrV~alGFql~-~Gk--LiGP~DlFddpafD~ 318 (385)
T 3r1m_A 288 GPPRLLGLGFNVK-NGR--LVGPTDLFDDPAFDE 318 (385)
T ss_dssp CSCEEEEEEEEEE-TTE--EEEEEESSCSGGGHH
T ss_pred CCCeEEEEEeEee-CCE--EccCccccCCccchH
Confidence 5556788999995 455 579999999999987
No 4
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=8.92 E-value=1.1e+02 Score=26.41 Aligned_cols=8 Identities=63% Similarity=0.821 Sum_probs=7.3
Q ss_pred EEEEeccc
Q psy7721 96 VAALQARN 103 (160)
Q Consensus 96 Vsa~QarN 103 (160)
|+|||+||
T Consensus 190 VvafqtrN 197 (395)
T 1r6x_A 190 VVAFQTRN 197 (395)
T ss_dssp EEEECCSS
T ss_pred EEEeccCC
Confidence 77899999
No 5
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=8.48 E-value=1.2e+02 Score=27.65 Aligned_cols=8 Identities=63% Similarity=0.787 Sum_probs=7.1
Q ss_pred EEEEeccc
Q psy7721 96 VAALQARN 103 (160)
Q Consensus 96 Vsa~QarN 103 (160)
|+|||+||
T Consensus 415 VvafqtrN 422 (630)
T 1x6v_B 415 VSAFQLRN 422 (630)
T ss_dssp EEEEEESS
T ss_pred EEEEecCC
Confidence 77899998
No 6
>1hh2_P NUSA, N utilization substance protein A; transcription regulation, termination; 2.1A {Thermotoga maritima} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 d.202.1.1 PDB: 1l2f_A
Probab=8.00 E-value=1.5e+02 Score=25.00 Aligned_cols=24 Identities=13% Similarity=0.021 Sum_probs=19.6
Q ss_pred CcchHHHHHHHhcccccccccccc
Q psy7721 136 KSSNEALCTSSLTKHSTVLSKKQL 159 (160)
Q Consensus 136 ~sgN~~F~~~L~~Wt~~~~~~~~~ 159 (160)
..-|-.+|..|+.|.+...+..|+
T Consensus 321 ~G~Nvrla~~Ltg~~idi~s~~~~ 344 (344)
T 1hh2_P 321 GGQNARLAAKLTGWKIDIKPIMNL 344 (344)
T ss_dssp GGHHHHHHHHHHSCEEEEEECCCC
T ss_pred CCccHHHHHHHHCCEeceeecccC
Confidence 345999999999999998776553
No 7
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=7.13 E-value=1.4e+02 Score=26.45 Aligned_cols=8 Identities=50% Similarity=0.605 Sum_probs=7.7
Q ss_pred EEEEeccc
Q psy7721 96 VAALQARN 103 (160)
Q Consensus 96 Vsa~QarN 103 (160)
|+|||+||
T Consensus 166 v~afqtrn 173 (552)
T 3cr8_A 166 IIAWQARQ 173 (552)
T ss_dssp EEEECCSS
T ss_pred eEEEecCC
Confidence 99999999
No 8
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=6.90 E-value=1.1e+02 Score=22.36 Aligned_cols=45 Identities=16% Similarity=0.188 Sum_probs=31.4
Q ss_pred cccCcEEEEEecccccc-ccccccccccccCCccccCcchHHHHHHHhcccccc
Q psy7721 101 ARNNARVVFSGSLYFFS-NEAFNSPVQKAIGGKKFDKSSNEALCTSSLTKHSTV 153 (160)
Q Consensus 101 arNNARv~~~GS~d~fS-d~~f~~~v~~~~~~~~~~~sgN~~F~~~L~~Wt~~~ 153 (160)
=|.|.| |.=|++++. |+.|...++.+ ..|++.+.|.+|..|=...
T Consensus 16 ykkN~r--w~qSI~L~KkDkLykDAietA------a~S~d~elaEeLL~yFVe~ 61 (125)
T 3qil_A 16 PRGSHM--WKQSVELAKKDSLYKDAMQYA------SESKDTELAEELLQWFLQE 61 (125)
T ss_dssp SSSCCC--CSSCCCCCSCCCCSSHHHHTT------TSSCCSHHHHHHHHHHTTS
T ss_pred hhcccc--HHHHHHHHHhcccHHHHHHHH------HHcCCHHHHHHHHHHHHHc
Confidence 344555 556777775 56777766654 3688999999999995443
No 9
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=6.71 E-value=1.6e+02 Score=25.93 Aligned_cols=8 Identities=63% Similarity=0.821 Sum_probs=7.3
Q ss_pred EEEEeccc
Q psy7721 96 VAALQARN 103 (160)
Q Consensus 96 Vsa~QarN 103 (160)
|+|||+||
T Consensus 191 v~afqtrn 198 (511)
T 1g8f_A 191 VVAFQTRN 198 (511)
T ss_dssp EEEEEESS
T ss_pred EEEEecCC
Confidence 77899999
No 10
>2asb_A Transcription elongation protein NUSA; protein-RNA complex, transcription/RNA complex; 1.50A {Mycobacterium tuberculosis} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 PDB: 2atw_A
Probab=6.62 E-value=1.9e+02 Score=23.33 Aligned_cols=23 Identities=9% Similarity=0.030 Sum_probs=18.7
Q ss_pred CcchHHHHHHHhccccccccccc
Q psy7721 136 KSSNEALCTSSLTKHSTVLSKKQ 158 (160)
Q Consensus 136 ~sgN~~F~~~L~~Wt~~~~~~~~ 158 (160)
..-|-.+|..|+.|.|...+..|
T Consensus 202 ~GqNvrLA~~Ltg~~idI~~~~~ 224 (251)
T 2asb_A 202 EGQNARLAARLTGWRIDIRGDAP 224 (251)
T ss_dssp GGHHHHHHHHHHSCEEEEEESSC
T ss_pred CcCcHHHHHHHHCCEecceEHHH
Confidence 34599999999999998876543
Done!