Query psy7721
Match_columns 160
No_of_seqs 103 out of 198
Neff 5.7
Searched_HMMs 13730
Date Fri Aug 16 17:09:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7721.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7721hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1hh2p3 d.52.3.1 (P:277-344) T 33.4 8.8 0.00064 23.6 1.6 24 136-159 45-68 (68)
2 d2asba3 d.52.3.1 (A:263-329) T 28.1 12 0.00087 22.9 1.5 23 136-158 44-66 (67)
3 d1x6va2 c.26.1.5 (A:390-624) A 27.1 10 0.00073 28.4 1.2 9 95-103 25-33 (235)
4 d1g8fa2 c.26.1.5 (A:169-389) A 25.7 11 0.0008 27.9 1.2 8 96-103 23-30 (221)
5 d1v47a2 c.26.1.5 (A:136-349) A 24.7 12 0.00087 27.6 1.2 9 95-103 22-30 (214)
6 d2je8a2 b.1.4.1 (A:784-864) Be 21.0 25 0.0018 21.9 2.1 30 94-123 16-48 (81)
7 d1umga_ d.280.1.1 (A:) ST0318 10.7 1.1E+02 0.008 24.1 3.8 31 90-123 286-316 (362)
8 d1jhda2 c.26.1.5 (A:174-396) A 8.4 59 0.0043 22.7 1.2 8 96-103 22-29 (223)
9 d2choa1 a.246.1.1 (A:437-590) 8.2 56 0.0041 22.5 1.0 16 135-150 48-63 (154)
10 d1ajza_ c.1.21.1 (A:) Dihydrop 7.9 84 0.0061 23.7 2.0 58 47-106 3-67 (282)
No 1
>d1hh2p3 d.52.3.1 (P:277-344) Transcription factor NusA, C-terminal domains {Thermotoga maritima [TaxId: 2336]}
Probab=33.41 E-value=8.8 Score=23.62 Aligned_cols=24 Identities=13% Similarity=0.021 Sum_probs=20.1
Q ss_pred CcchHHHHHHHhcccccccccccc
Q psy7721 136 KSSNEALCTSSLTKHSTVLSKKQL 159 (160)
Q Consensus 136 ~sgN~~F~~~L~~Wt~~~~~~~~~ 159 (160)
+.-|-.+|..|+.|.+.+-+-.||
T Consensus 45 ~G~NvrLas~Ltg~~idI~s~~~~ 68 (68)
T d1hh2p3 45 GGQNARLAAKLTGWKIDIKPIMNL 68 (68)
T ss_dssp GGHHHHHHHHHHSCEEEEEECCCC
T ss_pred CcchHHHHHHHHCCEEeeEEcccC
Confidence 345999999999999998877664
No 2
>d2asba3 d.52.3.1 (A:263-329) Transcription factor NusA, C-terminal domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=28.11 E-value=12 Score=22.93 Aligned_cols=23 Identities=9% Similarity=0.030 Sum_probs=19.0
Q ss_pred CcchHHHHHHHhccccccccccc
Q psy7721 136 KSSNEALCTSSLTKHSTVLSKKQ 158 (160)
Q Consensus 136 ~sgN~~F~~~L~~Wt~~~~~~~~ 158 (160)
+.-|-.+|..|+.|.+.+.+.-|
T Consensus 44 ~G~NvrLas~Ltg~~IdI~~ese 66 (67)
T d2asba3 44 EGQNARLAARLTGWRIDIRGDAP 66 (67)
T ss_dssp GGHHHHHHHHHHSCEEEEEESSC
T ss_pred CceeHHHHHHHHCCEEEEEeCCC
Confidence 34599999999999999887644
No 3
>d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.09 E-value=10 Score=28.45 Aligned_cols=9 Identities=56% Similarity=0.656 Sum_probs=7.9
Q ss_pred EEEEEeccc
Q psy7721 95 LVAALQARN 103 (160)
Q Consensus 95 LVsa~QarN 103 (160)
-|+|||+||
T Consensus 25 ~VvaFqTRN 33 (235)
T d1x6va2 25 AVSAFQLRN 33 (235)
T ss_dssp EEEEEEESS
T ss_pred eEEEeecCC
Confidence 489999998
No 4
>d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.72 E-value=11 Score=27.86 Aligned_cols=8 Identities=63% Similarity=0.821 Sum_probs=6.9
Q ss_pred EEEEeccc
Q psy7721 96 VAALQARN 103 (160)
Q Consensus 96 Vsa~QarN 103 (160)
|+|||+||
T Consensus 23 v~afqTrn 30 (221)
T d1g8fa2 23 VVAFQTRN 30 (221)
T ss_dssp EEEEEESS
T ss_pred EEEEecCC
Confidence 67899998
No 5
>d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]}
Probab=24.68 E-value=12 Score=27.64 Aligned_cols=9 Identities=56% Similarity=0.652 Sum_probs=7.4
Q ss_pred EEEEEeccc
Q psy7721 95 LVAALQARN 103 (160)
Q Consensus 95 LVsa~QarN 103 (160)
=|+|||+||
T Consensus 22 ~v~aFqTrn 30 (214)
T d1v47a2 22 KVVAFQTRN 30 (214)
T ss_dssp SEEEEEESS
T ss_pred EEEEEecCC
Confidence 368899998
No 6
>d2je8a2 b.1.4.1 (A:784-864) Beta-mannosidase, domains 2, 4 and 5 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=20.98 E-value=25 Score=21.89 Aligned_cols=30 Identities=17% Similarity=0.102 Sum_probs=23.9
Q ss_pred eEEEEEecccCcEEEEEec--cc-ccccccccc
Q psy7721 94 VLVAALQARNNARVVFSGS--LY-FFSNEAFNS 123 (160)
Q Consensus 94 ~LVsa~QarNNARv~~~GS--~d-~fSd~~f~~ 123 (160)
...--+++..=||.||.-+ .+ .|||.||+-
T Consensus 16 ~~~itl~s~~~a~~V~l~~~~~~g~fSDN~FdL 48 (81)
T d2je8a2 16 KCELTLFSSMLAKDIFIETPLQGARYSDNFFDL 48 (81)
T ss_dssp EEEEEEECSSCEEEEEEECSSTTCEESCCSEEE
T ss_pred eEEEEEEcCceeeeEEEEcCCcCceEecCeEEe
Confidence 3455678999999999876 44 999999964
No 7
>d1umga_ d.280.1.1 (A:) ST0318 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=10.69 E-value=1.1e+02 Score=24.13 Aligned_cols=31 Identities=26% Similarity=0.518 Sum_probs=25.0
Q ss_pred ccceeEEEEEecccCcEEEEEecccccccccccc
Q psy7721 90 GKNTVLVAALQARNNARVVFSGSLYFFSNEAFNS 123 (160)
Q Consensus 90 G~q~~LVsa~QarNNARv~~~GS~d~fSd~~f~~ 123 (160)
|--.....|||-. |.| ++|-.|||.|..|+.
T Consensus 286 gpPrV~alGFql~-~Gk--L~GP~DlFddpafD~ 316 (362)
T d1umga_ 286 GPPRLLGLGFNVK-NGR--LVGPTDLFDDPAFDE 316 (362)
T ss_dssp CSCEEEEEEEEEE-TTE--EEEEEESSCSGGGHH
T ss_pred CCCeEEEEEEEee-CCE--EcCcccccCCcchhH
Confidence 4456778899995 455 579999999999987
No 8
>d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]}
Probab=8.43 E-value=59 Score=22.71 Aligned_cols=8 Identities=63% Similarity=0.821 Sum_probs=4.4
Q ss_pred EEEEeccc
Q psy7721 96 VAALQARN 103 (160)
Q Consensus 96 Vsa~QarN 103 (160)
|.|||+||
T Consensus 22 v~~f~Tfn 29 (223)
T d1jhda2 22 VVAFQTRN 29 (223)
T ss_dssp EEEEEESS
T ss_pred EEEeeCCC
Confidence 45566554
No 9
>d2choa1 a.246.1.1 (A:437-590) Glucosaminidase GH84 post-catalytic domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=8.23 E-value=56 Score=22.51 Aligned_cols=16 Identities=13% Similarity=-0.010 Sum_probs=14.0
Q ss_pred cCcchHHHHHHHhccc
Q psy7721 135 DKSSNEALCTSSLTKH 150 (160)
Q Consensus 135 ~~sgN~~F~~~L~~Wt 150 (160)
.+++|+.|.++|.-|.
T Consensus 48 ~~~~N~~l~~Ei~pWL 63 (154)
T d2choa1 48 MNTENKPLIVEITPWV 63 (154)
T ss_dssp HCCSSHHHHHHHHHHH
T ss_pred hcCCCHhHHHHHHHHH
Confidence 3688999999999995
No 10
>d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia coli [TaxId: 562]}
Probab=7.94 E-value=84 Score=23.72 Aligned_cols=58 Identities=22% Similarity=0.332 Sum_probs=38.9
Q ss_pred eeEeeeeeeeCCCCCeeEeeeecCCceeecCCCCC-----C--ccCCcccccceeEEEEEecccCcE
Q psy7721 47 LLYQGTGLIVDPANPLVLSVLSADSSAYSYNPDKP-----I--KEYPHAVGKNTVLVAALQARNNAR 106 (160)
Q Consensus 47 vlf~Gvg~~l~~~npL~~pIL~A~~TsyS~~~~~~-----~--~~~~~~~G~q~~LVsa~QarNNAR 106 (160)
+.++|-.+-++ +|+++-||..++-|||-.-.-. . .+.-...|-.+.=|.|-=+|-+|.
T Consensus 3 ~~~~~~~l~l~--~P~IMGIlNvTPDSFsdgg~~~~~~~a~~~a~~mi~~GAdiIDIGgeSTrPga~ 67 (282)
T d1ajza_ 3 LFAQGTSLDLS--HPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAA 67 (282)
T ss_dssp EEETTEEEETT--SCEEEEEEECCTTTSTTTTCSSHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCC
T ss_pred EEECCEEecCC--CCeEEEEEeCCCCCCCCCCcCCCHHHHHHHHHHHHHCCCCEEEECCcccccccc
Confidence 34577766665 7999999999999999432211 1 112334577787788877777764
Done!