RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7721
         (160 letters)



>d2gc6a1 c.59.1.2 (A:297-425) Folylpolyglutamate synthetase,
           C-terminal domain {Lactobacillus casei [TaxId: 1582]}
          Length = 129

 Score = 26.8 bits (58), Expect = 0.73
 Identities = 9/34 (26%), Positives = 14/34 (41%)

Query: 82  IKEYPHAVGKNTVLVAALQARNNARVVFSGSLYF 115
           + E          L A+L    +  +V +GSLY 
Sbjct: 86  LHEGRLKDSWQEALAASLNDVPDQPIVITGSLYL 119


>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}
          Length = 348

 Score = 26.5 bits (57), Expect = 1.6
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 113 LYFFSNEAFNSPVQKAIGGKKFDKSSNEALCTSSLTKHSTV 153
           +Y   N+ F + +   +   K     +EA  T S T+ S V
Sbjct: 305 IYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQV 345


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.311    0.128    0.354 

Gapped
Lambda     K      H
   0.267   0.0457    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 539,783
Number of extensions: 22151
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 2
Length of query: 160
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 82
Effective length of database: 1,336,656
Effective search space: 109605792
Effective search space used: 109605792
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 49 (23.3 bits)