Query psy7726
Match_columns 96
No_of_seqs 172 out of 1092
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 17:15:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7726.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7726hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ddh_A Acyl-COA oxidase; beta 99.7 3.2E-18 1.1E-22 132.4 5.4 91 1-96 240-330 (661)
2 1w07_A Acyl-COA oxidase; oxido 99.7 6.9E-18 2.4E-22 130.3 3.9 92 1-96 242-333 (659)
3 2jif_A Short/branched chain sp 99.6 1.9E-16 6.4E-21 115.8 4.9 73 1-96 235-307 (404)
4 1ukw_A Acyl-COA dehydrogenase; 99.6 2.8E-16 9.5E-21 113.7 5.7 73 1-96 211-283 (379)
5 1buc_A Butyryl-COA dehydrogena 99.6 2.7E-16 9.2E-21 113.8 5.2 73 1-96 216-288 (383)
6 3mkh_A Nitroalkane oxidase; ox 99.6 2.9E-16 9.8E-21 115.4 5.4 73 1-96 243-316 (438)
7 2d29_A Acyl-COA dehydrogenase; 99.6 2.4E-16 8.2E-21 114.3 4.7 73 1-96 218-290 (387)
8 2z1q_A Acyl-COA dehydrogenase; 99.6 3.2E-16 1.1E-20 119.4 5.5 73 1-96 233-305 (577)
9 2dvl_A Acyl-COA dehydrogenase; 99.6 3.1E-16 1.1E-20 113.2 4.9 73 1-96 205-277 (372)
10 2pg0_A Acyl-COA dehydrogenase; 99.6 3.3E-16 1.1E-20 113.5 4.9 73 1-96 218-290 (385)
11 2wbi_A Acyl-COA dehydrogenase 99.6 3.8E-16 1.3E-20 114.8 5.2 73 1-96 249-321 (428)
12 4hr3_A Putative acyl-COA dehyd 99.6 2.9E-16 1E-20 114.7 4.5 73 1-96 241-313 (415)
13 1rx0_A Acyl-COA dehydrogenase 99.6 3.7E-16 1.3E-20 113.7 4.9 73 1-96 224-296 (393)
14 3r7k_A Probable acyl COA dehyd 99.6 3.7E-16 1.3E-20 114.0 4.7 73 1-96 236-308 (403)
15 1egd_A Medium chain acyl-COA d 99.6 3.7E-16 1.3E-20 113.7 4.7 73 1-96 225-297 (396)
16 3p4t_A Putative acyl-COA dehyd 99.6 4.9E-16 1.7E-20 113.4 4.9 73 1-96 233-305 (403)
17 2vig_A Short-chain specific ac 99.6 4.8E-16 1.6E-20 113.0 4.7 73 1-96 213-285 (391)
18 3pfd_A Acyl-COA dehydrogenase; 99.6 3.8E-16 1.3E-20 113.5 4.1 73 1-96 225-297 (393)
19 1ivh_A Isovaleryl-COA dehydrog 99.6 4.2E-16 1.4E-20 113.3 4.2 73 1-96 224-296 (394)
20 3nf4_A Acyl-COA dehydrogenase; 99.6 6.2E-16 2.1E-20 112.0 5.0 73 1-96 220-292 (387)
21 3owa_A Acyl-COA dehydrogenase; 99.6 5.6E-16 1.9E-20 118.7 4.9 73 1-96 238-310 (597)
22 3swo_A Glutaryl-COA dehydrogen 99.6 8.6E-16 3E-20 111.8 4.7 72 1-96 227-298 (399)
23 1r2j_A Protein FKBI; polyketid 99.6 4E-16 1.4E-20 112.5 2.6 73 1-96 194-267 (366)
24 3mpi_A Glutaryl-COA dehydrogen 99.6 1.2E-15 4.3E-20 110.7 4.9 73 1-96 215-287 (397)
25 2ix5_A Acyl-coenzyme A oxidase 99.6 1.3E-15 4.6E-20 112.5 4.6 72 1-96 258-329 (436)
26 2eba_A Putative glutaryl-COA d 99.6 1.7E-15 5.7E-20 109.8 4.9 72 1-96 215-286 (385)
27 3sf6_A Glutaryl-COA dehydrogen 99.6 1.2E-15 4.1E-20 111.3 4.1 72 1-96 232-303 (403)
28 3ii9_A Glutaryl-COA dehydrogen 99.6 1.8E-15 6.3E-20 110.0 4.1 72 1-96 225-296 (396)
29 2uxw_A VERY-long-chain specifi 99.6 2.6E-15 9E-20 115.1 4.9 73 1-96 262-334 (607)
30 1siq_A GCD, glutaryl-COA dehyd 99.5 2.4E-15 8.1E-20 109.2 3.9 72 1-96 218-289 (392)
31 2c12_A Nitroalkane oxidase; ox 99.5 9.1E-15 3.1E-19 107.6 5.3 73 1-96 245-319 (439)
32 2or0_A Hydroxylase; APC7385, r 99.4 1.1E-14 3.8E-19 106.3 0.5 85 1-96 212-297 (414)
33 2rfq_A 3-HSA hydroxylase, oxyg 99.4 3.2E-14 1.1E-18 103.0 2.9 83 1-96 195-282 (394)
34 2jbr_A P-hydroxyphenylacetate 99.4 1.7E-14 5.9E-19 105.6 -0.4 84 1-96 223-310 (422)
35 3djl_A Protein AIDB; alpha hel 99.2 1.9E-11 6.5E-16 92.8 4.5 70 1-96 271-340 (541)
36 3mxl_A Nitrososynthase; flavin 99.1 1.8E-11 6E-16 88.5 2.0 70 1-96 216-285 (395)
37 3m9v_A FAD-dependent oxidoredu 99.0 5.3E-11 1.8E-15 87.4 1.9 70 1-96 227-296 (439)
38 2yyk_A 4-hydroxyphenylacetate- 98.7 9.8E-09 3.3E-13 76.9 5.3 68 1-96 250-321 (481)
39 1u8v_A Gamma-aminobutyrate met 98.4 1.5E-07 5.3E-12 70.6 4.1 70 1-96 260-329 (490)
40 4g5e_A 2,4,6-trichlorophenol 4 98.3 3.9E-07 1.3E-11 69.0 4.4 70 1-96 257-326 (517)
41 3hwc_A Chlorophenol-4-monooxyg 98.3 3.4E-07 1.2E-11 69.3 3.9 68 1-96 256-325 (515)
No 1
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=99.72 E-value=3.2e-18 Score=132.37 Aligned_cols=91 Identities=27% Similarity=0.461 Sum_probs=73.9
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||++++||++++|+++|.+.+++ .+...+..|..+|+.+++.++|.++.|+++|++|+..|+|||++.
T Consensus 240 v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~-----~~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~~~ 314 (661)
T 2ddh_A 240 LKMDNYRIPRENMLMKYAQVKPDGTYVKPL-----SNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQ 314 (661)
T ss_dssp EEESSEEEEGGGBCCSSCEECTTCCEECCC-------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCSST
T ss_pred EEeccEEECHHHhcCcccccCCCCceeccc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCCC
Confidence 479999999999999987777678765432 244677889999999999999999999999999999999999866
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
+++|.||++||.+|++
T Consensus 315 ~~~e~~i~~~q~vq~r 330 (661)
T 2ddh_A 315 SEPEPQILDFQTQQYK 330 (661)
T ss_dssp TSCCCBGGGSHHHHHH
T ss_pred CCccccccccHHHHHH
Confidence 6788999999999974
No 2
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=99.69 E-value=6.9e-18 Score=130.35 Aligned_cols=92 Identities=36% Similarity=0.508 Sum_probs=75.8
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||++++||++++|+++|.+.+++++ +...+..|..+|+.+++.++|++++|++++++|+..|+|||++.
T Consensus 242 v~fd~VrVP~~~lLg~~~~v~~~g~~~~~~~~----~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~ 317 (659)
T 1w07_A 242 LMFDHVRIPRDQMLMRLSKVTREGEYVPSDVP----KQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHN 317 (659)
T ss_dssp EEESSEEEEGGGBCCSSEEECTTCCEEECSSC----GGGCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC--
T ss_pred EEeccEEECHHHhcCCcCccCCCCceecCCcc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 47999999999999987777767766443222 22456788999999999999999999999999999999999866
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
+++|.||++||.+|+|
T Consensus 318 ~~~e~pi~~~q~vq~r 333 (659)
T 1w07_A 318 GGIETQVIDYKTQQNR 333 (659)
T ss_dssp -CCCCBGGGSHHHHHH
T ss_pred CCcccchhccHHHHHH
Confidence 6788899999999974
No 3
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=99.63 E-value=1.9e-16 Score=115.80 Aligned_cols=73 Identities=21% Similarity=0.314 Sum_probs=66.5
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
+.||||+||.+++||.. | +||...+..+..+|+.+++.++|.++.|++.+++|+++|+|||+
T Consensus 235 v~fd~v~Vp~~~~lg~~------g----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-- 296 (404)
T 2jif_A 235 LTFENVKVPEANILGQI------G----------HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGK-- 296 (404)
T ss_dssp EEEEEEEEEGGGEESST------T----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEccEEECHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCC--
Confidence 47999999999999863 2 26888889999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 297 -----~i~~~q~vq~~ 307 (404)
T 2jif_A 297 -----RLFDFQGLQHQ 307 (404)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----cccccHHHHHH
Confidence 99999999874
No 4
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=99.63 E-value=2.8e-16 Score=113.69 Aligned_cols=73 Identities=25% Similarity=0.267 Sum_probs=66.5
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
+.||||+||.+++||.. | .||...+..+..+|+.+++.++|.++.+++.+++|+++|+|||+
T Consensus 211 v~fd~v~Vp~~~~lg~~------~----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fg~-- 272 (379)
T 1ukw_A 211 LVFEDVKVPVENRLGEE------G----------EGFKIAMQTLNKTRIPVAAGSVGVARRALDEARKYAKEREAFGE-- 272 (379)
T ss_dssp EEEEEEEEEGGGEESCT------T----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSS--
T ss_pred EEEeeEEecHHhcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc--
Confidence 47999999999999863 2 26888889999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 273 -----~i~~~q~vq~~ 283 (379)
T 1ukw_A 273 -----PIANFQAIQFK 283 (379)
T ss_dssp -----BGGGSHHHHHH
T ss_pred -----chhhhHHHHHH
Confidence 99999999874
No 5
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=99.62 E-value=2.7e-16 Score=113.78 Aligned_cols=73 Identities=29% Similarity=0.342 Sum_probs=66.5
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||.. | +||...+..+..+|+.+++.++|.++++++.+++|+++|+|||+
T Consensus 216 v~f~~v~Vp~~~~lg~~------g----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fG~-- 277 (383)
T 1buc_A 216 LVFQDVKVPAENMLGEE------G----------KGFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGK-- 277 (383)
T ss_dssp EEEEEEEECGGGEESCT------T----------BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEccEEeCHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc--
Confidence 47999999999999863 2 26888888999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 278 -----~i~~~q~vq~~ 288 (383)
T 1buc_A 278 -----PLCKFQSISFK 288 (383)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhhhHHHHHH
Confidence 99999999874
No 6
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=99.62 E-value=2.9e-16 Score=115.45 Aligned_cols=73 Identities=15% Similarity=0.074 Sum_probs=66.6
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcC-CC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFG-ED 79 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg-~~ 79 (96)
|.||||+||.+++||.. | +||..++..+..+|+.+++.++|++++|++.+++|+++|+||| +
T Consensus 243 v~fddv~VP~~~~lg~~------~----------~g~~~~~~~l~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~g~~- 305 (438)
T 3mkh_A 243 VRYTNVRVPTKNVLCPA------G----------QGAKVAFGAFDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGGAV- 305 (438)
T ss_dssp EEEEEEEEEGGGEEECT------T----------THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSS-
T ss_pred EEECcEEECHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcEeCCCe-
Confidence 47999999999999863 2 2688889999999999999999999999999999999999999 7
Q ss_pred CCCcccchhhhhccccC
Q psy7726 80 REGRETSVIEYQTQIPR 96 (96)
Q Consensus 80 ~~~~e~~i~~~q~~q~~ 96 (96)
||++||.+|++
T Consensus 306 ------pi~~~q~vq~~ 316 (438)
T 3mkh_A 306 ------PLLERQAFADL 316 (438)
T ss_dssp ------CGGGSHHHHHH
T ss_pred ------eccccHHHHHH
Confidence 99999999874
No 7
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=99.62 E-value=2.4e-16 Score=114.29 Aligned_cols=73 Identities=25% Similarity=0.306 Sum_probs=66.5
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|+||||+||.+++||.. | +||...+..+..+|+.+++.++|.++.+++.+++|+++|+|||+
T Consensus 218 v~f~~v~Vp~~~~lg~~------~----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-- 279 (387)
T 2d29_A 218 LILEDLFVPEEALLGER------G----------KGFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGR-- 279 (387)
T ss_dssp EEEEEEEEEGGGEESST------T----------BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEeeEEECHHHcCCCC------C----------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCc--
Confidence 47999999999999863 2 26888889999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 280 -----~i~~~q~vq~~ 290 (387)
T 2d29_A 280 -----PIAEFEGVSFK 290 (387)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chHhhHHHHHH
Confidence 99999999874
No 8
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=99.62 E-value=3.2e-16 Score=119.40 Aligned_cols=73 Identities=21% Similarity=0.304 Sum_probs=66.9
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
+.||||+||.+++||+. | +||..++..|+.+|+.+++.++|.++.+++.+++|+++|+|||+
T Consensus 233 v~fddv~VP~~~llg~~------g----------~g~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~-- 294 (577)
T 2z1q_A 233 VILEDVKVPVENVLGEI------G----------KGHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGR-- 294 (577)
T ss_dssp EEEEEEEEEGGGEESCT------T----------CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSSS--
T ss_pred EEecceeccHHHccCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC--
Confidence 47999999999999863 2 25888899999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||++||.+|++
T Consensus 295 -----pi~~~q~vq~~ 305 (577)
T 2z1q_A 295 -----PIGRFGLIQQK 305 (577)
T ss_dssp -----BGGGSHHHHHH
T ss_pred -----chhhhHHHHHH
Confidence 99999999974
No 9
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=99.62 E-value=3.1e-16 Score=113.20 Aligned_cols=73 Identities=30% Similarity=0.285 Sum_probs=66.5
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
+.||||+||.+++||.. | +||...+..+..+|+.+++.++|.++++++.+++|+++|+|||+
T Consensus 205 v~fd~v~Vp~~~~lg~~------~----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-- 266 (372)
T 2dvl_A 205 VRLEEVFVPEENLLGEE------G----------RGLAYALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGK-- 266 (372)
T ss_dssp EEEEEEEEEGGGEESST------T----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEECcEEeCHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC--
Confidence 47999999999999863 2 26878889999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 267 -----~i~~~q~vq~~ 277 (372)
T 2dvl_A 267 -----KLKEHQAIAFK 277 (372)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhhhHHHHHH
Confidence 99999999874
No 10
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=99.61 E-value=3.3e-16 Score=113.48 Aligned_cols=73 Identities=26% Similarity=0.247 Sum_probs=66.6
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
+.||||+||.+++||.. | +||...+..+..+|+.+++.++|.++.+++.+++|+++|+|||+
T Consensus 218 v~fd~v~Vp~~~~lg~~------g----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-- 279 (385)
T 2pg0_A 218 LFFQDAKVPAYNLLGEE------G----------KGFYYLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGK-- 279 (385)
T ss_dssp EEEEEEEEEGGGEESCT------T----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEcceEEcHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCC--
Confidence 47999999999999863 2 26888889999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 280 -----~i~~~q~v~~~ 290 (385)
T 2pg0_A 280 -----RVSEFQTVQFR 290 (385)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----ccchhHHHHHH
Confidence 99999999874
No 11
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=99.61 E-value=3.8e-16 Score=114.80 Aligned_cols=73 Identities=23% Similarity=0.136 Sum_probs=66.5
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||.. | +||...+..+..+|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 249 v~fddv~VP~~~~lg~~------g----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-- 310 (428)
T 2wbi_A 249 IHFNQVRVPATNLILGE------G----------RGFEISQGRLGPGRIHHCMRTVGLAERALQIMCERATQRIAFKK-- 310 (428)
T ss_dssp EEEEEEEEEGGGBCSCT------T----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEeCceEECHHHhcCCc------c----------chHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC--
Confidence 47999999999999863 2 26888888999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 311 -----~i~~~q~vq~~ 321 (428)
T 2wbi_A 311 -----KLYAHEVVAHW 321 (428)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----ChhhhHHHHHH
Confidence 99999999874
No 12
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=99.61 E-value=2.9e-16 Score=114.71 Aligned_cols=73 Identities=22% Similarity=0.146 Sum_probs=66.8
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||.. | +||...+..+..+|+.+++.++|+++.+++.+++|+++|+|||+
T Consensus 241 v~fddv~Vp~~~~lg~~------~----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~-- 302 (415)
T 4hr3_A 241 VSFDNVRLPADAFIAGP------G----------KGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGK-- 302 (415)
T ss_dssp EEEEEEEEEGGGBSSCT------T----------CHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEccEEECHHHcCCCC------C----------chHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCC--
Confidence 47999999999999863 2 26888899999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||++||.+|++
T Consensus 303 -----~i~~~q~vq~~ 313 (415)
T 4hr3_A 303 -----PLVNLGGNRER 313 (415)
T ss_dssp -----EGGGSTTHHHH
T ss_pred -----cHHHhHHHHHH
Confidence 99999999874
No 13
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.61 E-value=3.7e-16 Score=113.67 Aligned_cols=73 Identities=25% Similarity=0.318 Sum_probs=66.4
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||.. | .||..++..+..+|+.+++.++|.++++++.+++|+++|+|||+
T Consensus 224 v~fd~v~Vp~~~~lg~~------g----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-- 285 (393)
T 1rx0_A 224 VIFEDCAVPVANRIGSE------G----------QGFLIAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGE-- 285 (393)
T ss_dssp EEEEEEEEEGGGEESST------T----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEcCeEeCHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC--
Confidence 47999999999999863 2 26888889999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 286 -----~i~~~q~vq~~ 296 (393)
T 1rx0_A 286 -----PLASNQYLQFT 296 (393)
T ss_dssp -----EGGGCHHHHHH
T ss_pred -----chhhhHHHHHH
Confidence 99999999874
No 14
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=99.61 E-value=3.7e-16 Score=114.03 Aligned_cols=73 Identities=16% Similarity=0.173 Sum_probs=66.9
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||.. | +||...+..+..+|+.+++.++|.++++++.+++|+++|+|||+
T Consensus 236 v~fd~v~Vp~~~~lg~~------~----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-- 297 (403)
T 3r7k_A 236 LSFVDVRVPADNLVGAE------N----------SGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGR-- 297 (403)
T ss_dssp EEEEEEEEEGGGEESST------T----------CHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEeeEEECHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCCC--
Confidence 47999999999999863 2 26888899999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 298 -----~i~~~q~vq~~ 308 (403)
T 3r7k_A 298 -----PLTGRQIIRHK 308 (403)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhhcHHHHHH
Confidence 99999999874
No 15
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=99.61 E-value=3.7e-16 Score=113.66 Aligned_cols=73 Identities=25% Similarity=0.233 Sum_probs=66.5
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|+||||+||.+++||.. | .||...+..+..+|+.+++.++|.++.+++.+++|+++|+|||+
T Consensus 225 v~fd~v~Vp~~~~lg~~------~----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-- 286 (396)
T 1egd_A 225 IVFEDVKVPKENVLIGD------G----------AGFKVAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGK-- 286 (396)
T ss_dssp EEEEEEEEEGGGBSSST------T----------BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTE--
T ss_pred EEECcEEECHHHcCCCC------C----------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCc--
Confidence 47999999999999853 2 26888889999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 287 -----~i~~~q~vq~~ 297 (396)
T 1egd_A 287 -----LLVEHQAISFM 297 (396)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhhhHHHHHH
Confidence 99999999874
No 16
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=99.60 E-value=4.9e-16 Score=113.36 Aligned_cols=73 Identities=16% Similarity=0.240 Sum_probs=66.7
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||.. | +||..++..+..+|+.+++.++|.++++++.+++|+++|+|||+
T Consensus 233 v~fddv~Vp~~~~lg~~------~----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~-- 294 (403)
T 3p4t_A 233 LSYTDVRVPVANLVGSE------N----------TGFAQIAAAFVAERVGLATQAYAGAQRCLDLTVEWCRNRDTFGR-- 294 (403)
T ss_dssp EEEEEEEEEGGGEESST------T----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEcceEecHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC--
Confidence 47999999999999863 2 26888899999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 295 -----pi~~~q~vq~~ 305 (403)
T 3p4t_A 295 -----PLISRQAVQNT 305 (403)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----cccccHHHHHH
Confidence 99999999874
No 17
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=99.60 E-value=4.8e-16 Score=112.96 Aligned_cols=73 Identities=25% Similarity=0.363 Sum_probs=66.6
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||.. | +||...+..+..+|+.+++.++|.++++++.+++|+++|+|||+
T Consensus 213 v~fd~v~Vp~~~~lg~~------g----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-- 274 (391)
T 2vig_A 213 LIFEDCRIPKDSILGEP------G----------MGFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGA-- 274 (391)
T ss_dssp EEEEEEEEEGGGEESST------T----------BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEECcEEECHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCC--
Confidence 47999999999999863 2 26888889999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 275 -----~i~~~q~v~~~ 285 (391)
T 2vig_A 275 -----PLTKLQVIQFK 285 (391)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----cchhhHHHHHH
Confidence 99999999874
No 18
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=99.60 E-value=3.8e-16 Score=113.53 Aligned_cols=73 Identities=25% Similarity=0.250 Sum_probs=66.8
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||.. | +||...+..+..+|+.+++.++|.++.+++.+++|+++|+|||+
T Consensus 225 v~fddv~Vp~~~~lg~~------g----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~-- 286 (393)
T 3pfd_A 225 LYFENCRIPGDRIIGEP------G----------TGFKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGR-- 286 (393)
T ss_dssp EEEEEEEEEGGGEESST------T----------CHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEccEEEcHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCc--
Confidence 47999999999999863 2 26888899999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 287 -----~i~~~q~vq~~ 297 (393)
T 3pfd_A 287 -----PVSDNQGVQFM 297 (393)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhhhHHHHHH
Confidence 99999999874
No 19
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.60 E-value=4.2e-16 Score=113.32 Aligned_cols=73 Identities=19% Similarity=0.278 Sum_probs=66.4
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||.. | +||...+..+..+|+.+++.++|.++++++.+++|+++|+|||+
T Consensus 224 v~fd~v~Vp~~~~lg~~------~----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-- 285 (394)
T 1ivh_A 224 LIFEDCKIPAANILGHE------N----------KGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQ-- 285 (394)
T ss_dssp EEEEEEEEEGGGEESCT------T----------CHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTE--
T ss_pred EEECcEEEcHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc--
Confidence 47999999999999863 2 26888889999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 286 -----~i~~~q~vq~~ 296 (394)
T 1ivh_A 286 -----KIGHFQLMQGK 296 (394)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhccHHHHHH
Confidence 99999999874
No 20
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=99.60 E-value=6.2e-16 Score=112.01 Aligned_cols=73 Identities=19% Similarity=0.159 Sum_probs=59.8
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
+.||||+||.+++||.. | +||...+..+..+|+.+++.++|+++.+++.+++|+++|+|||+
T Consensus 220 v~fd~v~Vp~~~~lg~~------~----------~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~-- 281 (387)
T 3nf4_A 220 AFYDNARIDADRRIGEE------G----------QGLQIAFSALDSGRLGIAAVATGLAQAALDEAVAYANERTAFGR-- 281 (387)
T ss_dssp EEEEEEEEEGGGEESST------T----------CHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred EEEeeEEecHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCC--
Confidence 47999999999999863 2 26888899999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 282 -----~i~~~q~v~~~ 292 (387)
T 3nf4_A 282 -----KIIDHQGLGFL 292 (387)
T ss_dssp -----CTTTC-CHHHH
T ss_pred -----chhhhHHHHHH
Confidence 99999999874
No 21
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=99.60 E-value=5.6e-16 Score=118.70 Aligned_cols=73 Identities=21% Similarity=0.320 Sum_probs=67.2
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||..+ +||..++..++.+|+.+++.++|.++.+++.+++|+++|+|||+
T Consensus 238 v~fddV~VP~~~lLG~~g----------------~G~~~~~~~l~~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~-- 299 (597)
T 3owa_A 238 LILEDALVPKENLLGEIG----------------KGHIIAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQ-- 299 (597)
T ss_dssp EEEEEEEEEGGGEESSTT----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEeceeecHHHhcCccc----------------chHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc--
Confidence 479999999999998632 26888999999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||++||.+|++
T Consensus 300 -----pi~~~q~vq~~ 310 (597)
T 3owa_A 300 -----PIARFPLIQEK 310 (597)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----cccccHHHHHH
Confidence 99999999974
No 22
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=99.58 E-value=8.6e-16 Score=111.84 Aligned_cols=72 Identities=15% Similarity=0.273 Sum_probs=65.5
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
+.||||+||.+++||. + + ||...+..+..+|+.+++.++|.++++++.+++|+++|+|||+
T Consensus 227 v~fd~v~Vp~~~~lg~-~----~------------g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fG~-- 287 (399)
T 3swo_A 227 LVLDNVRLPASAQLPL-A----E------------GLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDK-- 287 (399)
T ss_dssp EEEEEEEECGGGBCTT-C----C------------STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEccEEEcHHHcCCC-C----h------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCc--
Confidence 4799999999999985 2 2 3667888999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 288 -----~i~~~q~vq~~ 298 (399)
T 3swo_A 288 -----PLSNYQLTQEK 298 (399)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhhCHHHHHH
Confidence 99999999874
No 23
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=99.58 E-value=4e-16 Score=112.49 Aligned_cols=73 Identities=23% Similarity=0.196 Sum_probs=64.8
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASS-LIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGED 79 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~-~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~ 79 (96)
|.||||+||.+++||..+ + ||... +..+..+|+.+++.++|.++.+++.+++|+++|+|||+
T Consensus 194 v~f~~v~Vp~~~~lg~~~----~------------g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~- 256 (366)
T 1r2j_A 194 LHLDQVRVPAGAVLAGSG----A------------SLPMLVAASLAYGRKSVAWGCVGILRACRTAAVAHARTREQFGR- 256 (366)
T ss_dssp EEEEEEEEEGGGBCTTTT----S------------CTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTE-
T ss_pred EEEeeEEEcHHHcCCCCC----c------------cHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCC-
Confidence 479999999999998632 1 35566 77889999999999999999999999999999999999
Q ss_pred CCCcccchhhhhccccC
Q psy7726 80 REGRETSVIEYQTQIPR 96 (96)
Q Consensus 80 ~~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 257 ------~i~~~q~v~~~ 267 (366)
T 1r2j_A 257 ------PLGDHQLVAGH 267 (366)
T ss_dssp ------EGGGSHHHHHH
T ss_pred ------chhhhHHHHHH
Confidence 99999999874
No 24
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=99.58 E-value=1.2e-15 Score=110.72 Aligned_cols=73 Identities=19% Similarity=0.232 Sum_probs=66.6
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||.. | +||...+..+...|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 215 v~fddv~Vp~~~~lg~~------~----------~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~~a~~R~~fg~-- 276 (397)
T 3mpi_A 215 LFLDNVKVPKENILGKP------G----------DGARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGK-- 276 (397)
T ss_dssp EEEEEEEEEGGGEESST------T----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEeeEEECHHHcCCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC--
Confidence 47999999999999863 2 26888889999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 277 -----~i~~~q~vq~~ 287 (397)
T 3mpi_A 277 -----PIGDFQMNQDM 287 (397)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhhhHHHHHH
Confidence 99999999874
No 25
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=99.57 E-value=1.3e-15 Score=112.53 Aligned_cols=72 Identities=22% Similarity=0.292 Sum_probs=65.3
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|+||||+||.+++||.. + +|...+..+..+|+.+++.++|.++.+++.+++|+++|+|||+
T Consensus 258 v~fddv~VP~~~~lg~~-----~------------g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~qfG~-- 318 (436)
T 2ix5_A 258 ILLQNVFVPDEDRLPGV-----N------------SFQDTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGA-- 318 (436)
T ss_dssp EEEEEEEEEGGGBCTTC-----S------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEeccEEECHHHcCCcc-----c------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCc--
Confidence 47999999999999752 1 3767888999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 319 -----pi~~~q~vq~~ 329 (436)
T 2ix5_A 319 -----PLAAFQLNQQK 329 (436)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhhcHHHHHH
Confidence 99999999874
No 26
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=99.57 E-value=1.7e-15 Score=109.77 Aligned_cols=72 Identities=21% Similarity=0.225 Sum_probs=64.3
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
+.||||+||.+++| ..+ + ||...+..+..+|+.+++.++|.++.+++.+++|+++|+|||+
T Consensus 215 v~f~~v~Vp~~~~l-~~~----~------------g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-- 275 (385)
T 2eba_A 215 LVLEEVRVPESLRL-PKA----L------------GLKAPLSCLTQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGE-- 275 (385)
T ss_dssp EEEEEEEEEGGGBC-TTC----C------------STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSS--
T ss_pred EEEccEEEcHHHcc-CCC----c------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCe--
Confidence 47999999999999 422 2 3667788899999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 276 -----~i~~~q~vq~~ 286 (385)
T 2eba_A 276 -----PLAKKQLVQAK 286 (385)
T ss_dssp -----BGGGSHHHHHH
T ss_pred -----eHHhCHHHHHH
Confidence 99999999874
No 27
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=99.57 E-value=1.2e-15 Score=111.29 Aligned_cols=72 Identities=17% Similarity=0.241 Sum_probs=65.4
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||. + + ||...+..+..+|+.+++.++|.++.+++.+++|+++|+|||+
T Consensus 232 v~fd~v~Vp~~~~lg~-~----~------------g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-- 292 (403)
T 3sf6_A 232 LVLDGVRLPDSARLPG-A----T------------SLGAPLRCLNEARFGIVFGALGAARDCLETALAYACSREQFDR-- 292 (403)
T ss_dssp EEEEEEEEEGGGBCTT-C----C------------STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEccEEEcHHHccCC-C----h------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCC--
Confidence 4799999999999985 2 2 3667888999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 293 -----pi~~~q~vq~~ 303 (403)
T 3sf6_A 293 -----PIGGFQLTQQK 303 (403)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----cchhhHHHHHH
Confidence 99999999874
No 28
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=99.55 E-value=1.8e-15 Score=110.01 Aligned_cols=72 Identities=21% Similarity=0.268 Sum_probs=65.1
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++|+. + + ||...+..+..+|+.+++.++|.++.+++.+++|+++|+|||+
T Consensus 225 v~fddv~Vp~~~~l~~-~----~------------g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~-- 285 (396)
T 3ii9_A 225 IVLDEAFVPEENILPH-V----K------------GLRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGR-- 285 (396)
T ss_dssp EEEEEEEEEGGGBCTT-C----C------------STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEccEEECHHHccCC-C----h------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCC--
Confidence 4799999999999964 2 2 3667888999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 286 -----~i~~~q~vq~~ 296 (396)
T 3ii9_A 286 -----PLAANQLIQKK 296 (396)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhhhHHHHHH
Confidence 99999999874
No 29
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=99.55 E-value=2.6e-15 Score=115.14 Aligned_cols=73 Identities=25% Similarity=0.330 Sum_probs=66.8
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||+. | +||..++..|+.+|+.+++.++|.++.|++.+++|+++|+|||+
T Consensus 262 v~fddv~VP~~~llG~~------g----------~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~qfG~-- 323 (607)
T 2uxw_A 262 VFFDGVRVPSENVLGEV------G----------SGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGE-- 323 (607)
T ss_dssp EEEEEEEEEGGGEESST------T----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEeccEEecHHHhcCCC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC--
Confidence 47999999999999863 2 26888899999999999999999999999999999999999998
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||++||.+|++
T Consensus 324 -----pi~~~~~vq~~ 334 (607)
T 2uxw_A 324 -----KIHNFGLIQEK 334 (607)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhhcHHHHHH
Confidence 99999999864
No 30
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=99.54 E-value=2.4e-15 Score=109.20 Aligned_cols=72 Identities=18% Similarity=0.142 Sum_probs=64.2
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
+.||||+||.+++|+.. +| |...+..+..+|+.+++.++|+++++++.+++|+++|+|||+
T Consensus 218 v~fd~v~Vp~~~~lg~~-----~g------------~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~-- 278 (392)
T 1siq_A 218 IIMDGVEVPEENVLPGA-----SS------------LGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGV-- 278 (392)
T ss_dssp EEEEEEEEEGGGBCTTC-----CS------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEccEEECHHHcCCcc-----cC------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCc--
Confidence 47999999999999752 23 556778899999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 279 -----~i~~~q~vq~~ 289 (392)
T 1siq_A 279 -----PLARNQLIQKK 289 (392)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhhhHHHHHH
Confidence 99999999874
No 31
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=99.52 E-value=9.1e-15 Score=107.55 Aligned_cols=73 Identities=19% Similarity=0.183 Sum_probs=65.3
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhcCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFA-SSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTV-RKQFGE 78 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~-~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~-R~qfg~ 78 (96)
|.||||+||.+++||.. | +||. ..+..+..+|+.+++.++|.++.+++.+++|+++ |++||+
T Consensus 245 v~fddv~VP~~~~lg~~------~----------~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~rr~~~G~ 308 (439)
T 2c12_A 245 TRFTEFHVPHENLLCTP------G----------LKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSK 308 (439)
T ss_dssp EEEEEEEEEGGGBCSCT------T----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSS
T ss_pred EEEccEEecHHHcCCCC------C----------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhceeeCCe
Confidence 47999999999999852 2 3687 7888999999999999999999999999999996 889998
Q ss_pred CCCCcccchhhhhccccC
Q psy7726 79 DREGRETSVIEYQTQIPR 96 (96)
Q Consensus 79 ~~~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 309 -------~i~~~q~vq~~ 319 (439)
T 2c12_A 309 -------HIIEHQSVADK 319 (439)
T ss_dssp -------CGGGSHHHHHH
T ss_pred -------ehhccHHHHHH
Confidence 99999999874
No 32
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=99.44 E-value=1.1e-14 Score=106.32 Aligned_cols=85 Identities=11% Similarity=0.015 Sum_probs=62.7
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc-CCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQF-GED 79 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qf-g~~ 79 (96)
|.||||+||.+++|+....+ +|.+..... ..|+...+..+..+|+.+++.++|+++.|++.+++|+++|+|| |+
T Consensus 212 v~fd~v~VP~~~~lg~~~~~--~g~~~g~~~--~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G~- 286 (414)
T 2or0_A 212 LIVDGAFVPGYRTLNAAKVM--DGRAQKEAG--RPEPLFNMPYSCMFPLGITAAVIGITEGALACHIAVQKDRVAITGQ- 286 (414)
T ss_dssp EEEEEEEEEGGGEEEHHHHH--HSHHHHHHT--CSCSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTSC-
T ss_pred EEEccEEecHHHeecccccc--ccCCCcccc--CCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-
Confidence 47999999999999752000 010000000 0123344566888999999999999999999999999999999 98
Q ss_pred CCCcccchhhhhccccC
Q psy7726 80 REGRETSVIEYQTQIPR 96 (96)
Q Consensus 80 ~~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 287 ------~i~~~q~vq~~ 297 (414)
T 2or0_A 287 ------KIKEDPYVLSA 297 (414)
T ss_dssp ------BGGGCHHHHHH
T ss_pred ------ccccCHHHHHH
Confidence 99999999874
No 33
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=99.44 E-value=3.2e-14 Score=102.99 Aligned_cols=83 Identities=13% Similarity=-0.038 Sum_probs=62.7
Q ss_pred CcccceeeCcccccCccCCC--CCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh---h
Q psy7726 1 MMFSHYWVPRCSLLARFSSV--SPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRK---Q 75 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v--~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~---q 75 (96)
|.||||+||.+++|+..... ..+|.+. ..++...+..+...|+.+++.++|+++++++.+++|+++|+ |
T Consensus 195 v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~------~~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~~~~ 268 (394)
T 2rfq_A 195 VVVEDVFVPTHRVLSFKAMSNLTAPGLER------NTAPVYKMPWGTIHPTTISAPIVGMAYGAYDAHVEHQGKRVRAAF 268 (394)
T ss_dssp EEEEEEEEEGGGEEEHHHHHTTCCGGGTT------CCCGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred eEEcceEcChHHhcccccccccCCCCccc------CCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCCC
Confidence 47999999999999752000 0011000 01232345567889999999999999999999999999999 9
Q ss_pred cCCCCCCcccchhhhhccccC
Q psy7726 76 FGEDREGRETSVIEYQTQIPR 96 (96)
Q Consensus 76 fg~~~~~~e~~i~~~q~~q~~ 96 (96)
||+ ||.+||.+|++
T Consensus 269 fG~-------~i~~~q~vq~~ 282 (394)
T 2rfq_A 269 AGE-------KAKDDPFAKVR 282 (394)
T ss_dssp TTC-------GGGSCHHHHHH
T ss_pred CCc-------ccccCHHHHHH
Confidence 999 99999999874
No 34
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=99.40 E-value=1.7e-14 Score=105.61 Aligned_cols=84 Identities=8% Similarity=-0.145 Sum_probs=63.4
Q ss_pred CcccceeeCcccccCccCCCC--CCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh--hc
Q psy7726 1 MMFSHYWVPRCSLLARFSSVS--PQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRK--QF 76 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~--~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~--qf 76 (96)
|.||||+||.+++||....++ .+|... ....+...+..+..+|+.+++.++|+++++++.+++|+++|+ ||
T Consensus 223 v~fddv~VP~~~~lg~~~~~~g~~~g~g~-----~~~~~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~~f 297 (422)
T 2jbr_A 223 LKLVNVFIPEYRISKAKDMMEGKSAGFGL-----YPDSKIFYTPYRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYT 297 (422)
T ss_dssp EEEEEEEEEGGGEEEHHHHHHTCSTTTTS-----CTTCSSSSSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCBCTTT
T ss_pred EEEeeEEecHHHeecccccccCCCCcccc-----cCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 479999999999998630000 001100 000133456678899999999999999999999999999998 99
Q ss_pred CCCCCCcccchhhhhccccC
Q psy7726 77 GEDREGRETSVIEYQTQIPR 96 (96)
Q Consensus 77 g~~~~~~e~~i~~~q~~q~~ 96 (96)
|+ ||++||.+|++
T Consensus 298 G~-------~i~~~q~vq~~ 310 (422)
T 2jbr_A 298 GA-------NVGLATPALMR 310 (422)
T ss_dssp CC-------BCTTCHHHHHH
T ss_pred CC-------ccccCHHHHHH
Confidence 99 99999999874
No 35
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=99.16 E-value=1.9e-11 Score=92.79 Aligned_cols=70 Identities=17% Similarity=0.046 Sum_probs=62.2
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
+.||||+ +++||+. | +||..++..+..+|+.+++.++|++++|++.+++|+++|+|||+
T Consensus 271 v~fddv~---~~llG~~------g----------~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~~fG~-- 329 (541)
T 3djl_A 271 VEFQDAI---GWLLGLE------G----------EGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGN-- 329 (541)
T ss_dssp EEEEEEE---EEEESST------T----------CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTE--
T ss_pred EEEccce---eeeeecC------C----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCCC--
Confidence 4689985 8888863 2 26888899999999999999999999999999999999999999
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||++||.+|++
T Consensus 330 -----~i~~~p~vq~~ 340 (541)
T 3djl_A 330 -----PLIQQPLMRHV 340 (541)
T ss_dssp -----EGGGSHHHHHH
T ss_pred -----chhhCHHHHHH
Confidence 99999998863
No 36
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=99.11 E-value=1.8e-11 Score=88.49 Aligned_cols=70 Identities=23% Similarity=0.138 Sum_probs=55.2
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||... .|. ++...+..+..+|+.+++.++|.++++++.+++|++ |+
T Consensus 216 v~f~~v~Vp~~~~lg~~~----~g~----------g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r-- 274 (395)
T 3mxl_A 216 VVFDRCPVRADELLERGP----VGA----------RRDAVLAGQTVSSITMLGIYAGIAQAARDIAVGFCA-----GR-- 274 (395)
T ss_dssp EEEEEEEECGGGCCEEEE----SSC----------CCTTHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TT--
T ss_pred EEEcceEcCHHHhcCCCC----CCc----------cHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CC--
Confidence 479999999999998310 121 233445556669999999999999999999999997 55
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 275 -----~i~~~q~vq~~ 285 (395)
T 3mxl_A 275 -----GGEPRAGARAL 285 (395)
T ss_dssp -----CSCCCHHHHHH
T ss_pred -----CCCCCHHHHHH
Confidence 79999998864
No 37
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=99.03 E-value=5.3e-11 Score=87.37 Aligned_cols=70 Identities=20% Similarity=0.115 Sum_probs=54.1
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|.||||+||.+++||... .|. ++...+..+..+|+.+++.++|.+++|++.+++|+. ++
T Consensus 227 v~fddv~VP~~~~lg~~~----~g~----------g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r-- 285 (439)
T 3m9v_A 227 IVFDDCPIPADHVLMRDP----VGA----------RNDAVLAGQTVSSVSVLGVYVGVAQAAYDTAVAALE-----RR-- 285 (439)
T ss_dssp EEEEEEEECGGGEEECCC------C----------CCGGGHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TC--
T ss_pred EEEeeeEcCHHHccCCCC----CCc----------hHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CC--
Confidence 579999999999998321 121 222344445669999999999999999999999998 55
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
||.+||.+|++
T Consensus 286 -----~i~~~~~vq~~ 296 (439)
T 3m9v_A 286 -----PEPPQAAALTL 296 (439)
T ss_dssp -----SSCCCHHHHHH
T ss_pred -----CCCCCHHHHHH
Confidence 78999988864
No 38
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=98.74 E-value=9.8e-09 Score=76.93 Aligned_cols=68 Identities=12% Similarity=-0.025 Sum_probs=54.3
Q ss_pred CcccceeeCcccccC--ccCCCCCCCccccCCCChhhHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q psy7726 1 MMFSHYWVPRCSLLA--RFSSVSPQGDYSSLIPDPGLRFASS--LIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQF 76 (96)
Q Consensus 1 l~F~~vrVP~~~lLg--~~~~v~~~G~~~~~~~~~~~~f~~~--~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qf 76 (96)
|+||||+||.+|+|+ .. | .++... +..+..+|+.+++.++|.+..++.+|.+|+.. |
T Consensus 250 v~FddV~VP~e~vl~~G~~------~----------~g~~~~~~~~~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~ 310 (481)
T 2yyk_A 250 VIFDDVLVPWERVFILGNV------E----------LCNNAYGATGALNHMAHQVVALKTAKTEAFLGVAALMAEG---I 310 (481)
T ss_dssp EEEEEEEEEGGGEEEESCH------H----------HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred EEEccEEECHHHccCCCCc------c----------HHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHh---c
Confidence 479999999999984 31 1 234333 67789999999999999999999999988863 2
Q ss_pred CCCCCCcccchhhhhccccC
Q psy7726 77 GEDREGRETSVIEYQTQIPR 96 (96)
Q Consensus 77 g~~~~~~e~~i~~~q~~q~~ 96 (96)
+|.+||.+|++
T Consensus 311 ---------gi~~~q~vq~~ 321 (481)
T 2yyk_A 311 ---------GADVYGHVQEK 321 (481)
T ss_dssp ---------TGGGSHHHHHH
T ss_pred ---------ChhhhHHHHHH
Confidence 58899999864
No 39
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=98.43 E-value=1.5e-07 Score=70.61 Aligned_cols=70 Identities=10% Similarity=-0.047 Sum_probs=50.1
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|+||||+||.+|+|+. +. .| .++..++..+.+.|+.+++++++.+..++.+|.+... .|
T Consensus 260 v~FddV~VP~e~vl~~-g~---~~----------~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~---~~---- 318 (490)
T 1u8v_A 260 VVFDNVFIPNDRIFLC-QE---YD----------FAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAAD---YN---- 318 (490)
T ss_dssp EEEEEEEEEGGGEEEE-SC---GG----------GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH----
T ss_pred EEECceEeCHHHccCC-CC---hh----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc----
Confidence 4799999999999841 10 12 3576777788899998888887777777777765442 23
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
+|.+||.+|++
T Consensus 319 -----gi~~~q~vq~~ 329 (490)
T 1u8v_A 319 -----GAQKASHVKDK 329 (490)
T ss_dssp -----TCTTCHHHHHH
T ss_pred -----CchhcHHHHHH
Confidence 47788888763
No 40
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=98.34 E-value=3.9e-07 Score=69.01 Aligned_cols=70 Identities=7% Similarity=-0.030 Sum_probs=53.7
Q ss_pred CcccceeeCcccccCccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q psy7726 1 MMFSHYWVPRCSLLARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGEDR 80 (96)
Q Consensus 1 l~F~~vrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~~~ 80 (96)
|+||||+||.||+|.- ++ .| .++...+..+...|...++..++.+..++..+..++. ++
T Consensus 257 vvFDdV~VP~e~Vf~~-Ge---~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~~~ae---~~---- 315 (517)
T 4g5e_A 257 TVFDNVFIPWSHVFHL-GN---PE----------HAKLYPQRVFDWLHYHALIRQSVRAELMAGLAILITE---HI---- 315 (517)
T ss_dssp EEEEEEEEEGGGEEEE-SC---TT----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH----
T ss_pred EEecceeccHHHcccc-CC---hh----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hh----
Confidence 4799999999998732 11 12 2566778889999999999999999999999998884 33
Q ss_pred CCcccchhhhhccccC
Q psy7726 81 EGRETSVIEYQTQIPR 96 (96)
Q Consensus 81 ~~~e~~i~~~q~~q~~ 96 (96)
.|.+||.+|+|
T Consensus 316 -----Gi~~fq~Vq~k 326 (517)
T 4g5e_A 316 -----GTNKIPAVQTR 326 (517)
T ss_dssp -----TCTTSHHHHHH
T ss_pred -----CCcccHHHHHH
Confidence 26778888764
No 41
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=98.32 E-value=3.4e-07 Score=69.31 Aligned_cols=68 Identities=9% Similarity=-0.019 Sum_probs=42.4
Q ss_pred CcccceeeCccccc--CccCCCCCCCccccCCCChhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC
Q psy7726 1 MMFSHYWVPRCSLL--ARFSSVSPQGDYSSLIPDPGLRFASSLIPLFLGRWCVLGCTWGNLLKATLIAVRYSTVRKQFGE 78 (96)
Q Consensus 1 l~F~~vrVP~~~lL--g~~~~v~~~G~~~~~~~~~~~~f~~~~~~l~~~R~~~aa~a~g~~~~a~~~a~~ya~~R~qfg~ 78 (96)
|+||||+||.+++| |.+ | .+|..++..+...+.......++.+..++.++..++. +|
T Consensus 256 v~FddV~VP~e~vl~~Ge~------g----------~g~~~~~~~~~~~~r~~~~~~~~~a~~~lG~A~~~~e---~~-- 314 (515)
T 3hwc_A 256 TVFDNVFIPWEQVFHIGNP------E----------HAKLYPQRIFDWVHYHILIRQVLRAELIVGLAILITE---HI-- 314 (515)
T ss_dssp EEEEEEEEEGGGEEEESCT------T----------GGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH--
T ss_pred EEECceEECHHHccCCCCc------c----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hc--
Confidence 47999999999999 542 2 2454555555555322224455556666665555542 34
Q ss_pred CCCCcccchhhhhccccC
Q psy7726 79 DREGRETSVIEYQTQIPR 96 (96)
Q Consensus 79 ~~~~~e~~i~~~q~~q~~ 96 (96)
+|.+||.+|+|
T Consensus 315 -------gI~~fQ~Vq~k 325 (515)
T 3hwc_A 315 -------GTSKLPTVSAR 325 (515)
T ss_dssp -------TCTTSHHHHHH
T ss_pred -------CCcccHHHHHH
Confidence 48899999874
Done!