BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7728
(65 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8NFZ8|CADM4_HUMAN Cell adhesion molecule 4 OS=Homo sapiens GN=CADM4 PE=1 SV=1
Length = 388
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 18 SSIEIVGHPSNSKIEIRENQ----EITLECLVKNAKPAAKIVWYRGNTELK 64
+++ ++ P N +E+RE E+ L CLV ++PAA + WYR ELK
Sbjct: 116 ATLTVLVAPENPVVEVREQAVEGGEVELSCLVPRSRPAATLRWYRDRKELK 166
>sp|Q8R464|CADM4_MOUSE Cell adhesion molecule 4 OS=Mus musculus GN=Cadm4 PE=1 SV=1
Length = 388
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 18 SSIEIVGHPSNSKIEIRENQ----EITLECLVKNAKPAAKIVWYRGNTELK 64
+++ ++ P N +E+RE E+ L CLV ++PAA + WYR ELK
Sbjct: 116 ATLTVLVAPENPVVEVREQAVEGGEVELSCLVPRSRPAAVLRWYRDRKELK 166
>sp|Q1WIM1|CADM4_RAT Cell adhesion molecule 4 OS=Rattus norvegicus GN=Cadm4 PE=1 SV=1
Length = 388
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 18 SSIEIVGHPSNSKIEIRENQ----EITLECLVKNAKPAAKIVWYRGNTELK 64
+++ ++ P N +E+RE E+ L CLV ++PAA + WYR ELK
Sbjct: 116 ATLTVLVAPENPVVEVREQAVEGGEVELSCLVPRSRPAAVLRWYRDRKELK 166
>sp|Q9BY67|CADM1_HUMAN Cell adhesion molecule 1 OS=Homo sapiens GN=CADM1 PE=1 SV=2
Length = 442
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 9/58 (15%)
Query: 16 PP----SSIEIVGHPSNSKIEIR-----ENQEITLECLVKNAKPAAKIVWYRGNTELK 64
PP ++I ++ P N I+I+ E +EI + C +KPA I W++GNTELK
Sbjct: 130 PPQESYTTITVLVPPRNLMIDIQKDTAVEGEEIEVNCTAMASKPATTIRWFKGNTELK 187
>sp|Q66KX2|CADM4_XENLA Cell adhesion molecule 4 OS=Xenopus laevis GN=cadm4 PE=2 SV=1
Length = 390
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 18 SSIEIVGHPSNSKIEIRENQ----EITLECLVKNAKPAAKIVWYRGNTELK 64
+++ ++ P N +E++E EI L C+ KPAA + WYR ELK
Sbjct: 119 ATLTVIVPPDNPLVEVKEQAVEGGEIELTCISPRTKPAATLRWYRDRKELK 169
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 13 QFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63
QF+P +SI+ PS S + R+ E+ L+C V +I+W R N L
Sbjct: 223 QFSPTASIQ----PSQSLV--RDGDELNLKCEVTGNPRPTEIIWTRLNDSL 267
>sp|Q8R5M8|CADM1_MOUSE Cell adhesion molecule 1 OS=Mus musculus GN=Cadm1 PE=1 SV=2
Length = 456
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 16 PP----SSIEIVGHPSNSKIEIR-----ENQEITLECLVKNAKPAAKIVWYRGNTELK 64
PP ++I ++ P N I+I+ E +EI + C +KPA I W++GN ELK
Sbjct: 133 PPQESYTTITVLVPPRNLMIDIQKDTAVEGEEIEVNCTAMASKPATTIRWFKGNKELK 190
>sp|Q8IZU9|KIRR3_HUMAN Kin of IRRE-like protein 3 OS=Homo sapiens GN=KIRREL3 PE=1 SV=1
Length = 778
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 10 RLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR 58
RL PP I+G P I +R + L C NAKPAA I+W R
Sbjct: 140 RLTVLVPPDDPVILGGPV---ISLRAGDPLNLTCHADNAKPAASIIWLR 185
>sp|Q9R044|NPHN_RAT Nephrin OS=Rattus norvegicus GN=Nphs1 PE=1 SV=2
Length = 1252
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 16 PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63
PPS+I I+G S S EN+ +TL CL K+++P + W+ G +L
Sbjct: 353 PPSAITILGSVSQS-----ENKNVTLCCLTKSSRPRVLLRWWLGGRQL 395
>sp|Q9QZS7|NPHN_MOUSE Nephrin OS=Mus musculus GN=Nphs1 PE=1 SV=2
Length = 1256
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 16 PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63
PPS++ I+G S S EN+ +TL CL K+++P + W+ G +L
Sbjct: 353 PPSAVTILGSTSQS-----ENKNVTLCCLTKSSRPRVLLRWWLGGRQL 395
>sp|Q8BR86|KIRR3_MOUSE Kin of IRRE-like protein 3 OS=Mus musculus GN=Kirrel3 PE=2 SV=1
Length = 778
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 10 RLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR 58
RL PP I+G P I +R + L C NAKPAA I+W R
Sbjct: 140 RLTVLVPPDDPIILGGPV---ISLRAGDPLNLTCHADNAKPAASIIWLR 185
>sp|Q6X936|KIRR1_RAT Kin of IRRE-like protein 1 OS=Rattus norvegicus GN=Kirrel PE=1 SV=1
Length = 789
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62
R +L PP I G P I ++ L C NAKPAA I+W+R T+
Sbjct: 143 RAKLTVLIPPEDTRIDGGPV---ILLQAGTPYNLTCRAFNAKPAATIIWFRDGTQ 194
>sp|Q80W68|KIRR1_MOUSE Kin of IRRE-like protein 1 OS=Mus musculus GN=Kirrel PE=1 SV=1
Length = 789
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62
R +L PP I G P I ++ L C NAKPAA I+W+R T+
Sbjct: 143 RAKLTVLIPPEETRIDGGPV---ILLQAGTPYNLTCRAFNAKPAATIIWFRDGTQ 194
>sp|Q7ZXX1|CADM3_XENLA Cell adhesion molecule 3 OS=Xenopus laevis GN=cadm3 PE=2 SV=1
Length = 394
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 20 IEIVGHPSNSKIE-----IRENQEITLECLVKNAKPAAKIVWYRGNTELK 64
+ ++G P ++ +EN + L C +KPAA I WY+G EL+
Sbjct: 119 VTVLGVPQKPQVSGFESAFKENDKAKLRCTTSGSKPAANIKWYKGPEELE 168
>sp|Q96J84|KIRR1_HUMAN Kin of IRRE-like protein 1 OS=Homo sapiens GN=KIRREL PE=1 SV=2
Length = 757
Score = 36.6 bits (83), Expect = 0.047, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62
R +L PP I G P I ++ L C NAKPAA I+W+R T+
Sbjct: 111 RAKLTVLIPPEDTRIDGGPV---ILLQAGTPHNLTCRAFNAKPAATIIWFRDGTQ 162
>sp|A2ASS6|TITIN_MOUSE Titin OS=Mus musculus GN=Ttn PE=1 SV=1
Length = 35213
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELKL 65
GP T ++APP + E+ + IR ++ L+ V KP KI+W +G+ EL L
Sbjct: 30822 GPVTCRDEYAPPKA-ELDARLQGDLVTIRAGSDLVLDAAV-GGKPEPKIIWTKGDKELDL 30879
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63
+ +E+ E I L C V +KP A+++WY+G+ E+
Sbjct: 14259 ANLEVSEGDTIKLVCEV--SKPGAEVIWYKGDEEI 14291
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 34 RENQEITLECLVKNAKPAAKIVWYRGNTEL 63
++ + I LEC + + P K+VW+R ++EL
Sbjct: 7265 KQGESIQLECKI-SGSPEIKVVWFRNDSEL 7293
>sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=4
Length = 34350
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELKL 65
GP T ++APP + E+ + IR ++ L+ V KP KI+W +G+ EL L
Sbjct: 29960 GPVTCRDEYAPPKA-ELDARLHGDLVTIRAGSDLVLDAAV-GGKPEPKIIWTKGDKELDL 30017
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63
+ IE+ E I L C V +KP A+++WY+G+ E+
Sbjct: 13397 ANIEVSETDTIKLVCEV--SKPGAEVIWYKGDEEI 13429
>sp|Q1WIM3|CADM3_RAT Cell adhesion molecule 3 OS=Rattus norvegicus GN=Cadm3 PE=2 SV=1
Length = 396
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 18 SSIEIVGHP-----SNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63
S + ++G P + K +RE + TL C +KPAA++ W +G+ EL
Sbjct: 120 SLVTVLGIPQKPIITGYKSSLREKETATLNCQSSGSKPAAQLAWRKGDQEL 170
>sp|Q99N28|CADM3_MOUSE Cell adhesion molecule 3 OS=Mus musculus GN=Cadm3 PE=1 SV=1
Length = 396
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 18 SSIEIVGHP-----SNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63
S + ++G P + K +RE + TL C +KPAA++ W +G+ EL
Sbjct: 120 SLVTVLGIPQKPIITGYKSSLREKETATLNCQSSGSKPAAQLTWRKGDQEL 170
>sp|Q7TNR6|IGS21_MOUSE Immunoglobulin superfamily member 21 OS=Mus musculus GN=Igsf21 PE=2
SV=1
Length = 468
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 15 APPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR 58
APP+SIE+V S + + Q TL C+V KPA + + R
Sbjct: 142 APPTSIEVVAADSPAPFSRYQAQNFTLVCIVSGGKPAPMVYFKR 185
>sp|O60500|NPHN_HUMAN Nephrin OS=Homo sapiens GN=NPHS1 PE=1 SV=1
Length = 1241
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 16 PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63
PPS+I I+G S + EN+ +TL C+ K+++P + W+ G +L
Sbjct: 339 PPSAIIILGSASQT-----ENKNVTLSCVSKSSRPRVLLRWWLGWRQL 381
>sp|P50895|BCAM_HUMAN Basal cell adhesion molecule OS=Homo sapiens GN=BCAM PE=1 SV=2
Length = 628
Score = 35.0 bits (79), Expect = 0.16, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 10 RLYQFAPPSSIEIVGHPSNSKIEIREN--QEITLECLVKNAKPAAKIVWYRGNTELKL 65
RL FA P + E+ P+ + + E+ QEI C +N PA KI WYR L++
Sbjct: 140 RLNVFAKPEATEV--SPNKGTLSVMEDSAQEIA-TCNSRNGNPAPKITWYRNGQRLEV 194
>sp|Q8N126|CADM3_HUMAN Cell adhesion molecule 3 OS=Homo sapiens GN=CADM3 PE=1 SV=1
Length = 398
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 18 SSIEIVGHP-----SNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63
S + ++G P + K +RE TL C +KPAA++ W +G+ EL
Sbjct: 122 SLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPAARLTWRKGDQEL 172
>sp|Q96ID5|IGS21_HUMAN Immunoglobulin superfamily member 21 OS=Homo sapiens GN=IGSF21 PE=2
SV=1
Length = 467
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 15 APPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR 58
APP+SIE+V + + + Q TL C+V KPA + + R
Sbjct: 142 APPTSIEVVAADTPAPFSRYQAQNFTLVCIVSGGKPAPMVYFKR 185
>sp|Q90460|C166A_DANRE CD166 antigen homolog A OS=Danio rerio GN=alcama PE=2 SV=1
Length = 564
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 8/53 (15%)
Query: 19 SIEIVGH--PS----NSKIEIRENQEITL--ECLVKNAKPAAKIVWYRGNTEL 63
S+E+ H PS +K++ EN ++T EC+V++A PAA ++W + N L
Sbjct: 122 SVEVKVHKKPSAPVIKNKVKELENGKLTQLGECVVESANPAADLIWMKNNQAL 174
>sp|Q9I7U4|TITIN_DROME Titin OS=Drosophila melanogaster GN=sls PE=1 SV=3
Length = 18141
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 31 IEIRENQEITLEC-LVKNAKPAAKIVWYRGNTELK 64
+EI+ENQ EC L+ + P+ ++ WY N LK
Sbjct: 1567 VEIKENQRAHFECRLIPVSDPSMRVEWYHNNLPLK 1601
>sp|Q0AYB2|MUTL_SYNWW DNA mismatch repair protein MutL OS=Syntrophomonas wolfei subsp.
wolfei (strain Goettingen) GN=mutL PE=3 SV=1
Length = 584
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 1 MLSRYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEI 39
+L+R P L PP SI++ HP S+I R+ Q I
Sbjct: 274 LLAREQPLVILQIAVPPDSIDVNVHPQKSEIRFRDEQSI 312
>sp|O74941|PEX1_SCHPO Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex1 PE=3 SV=1
Length = 937
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 14/57 (24%)
Query: 5 YGPRTRLYQFAP----PSS----------IEIVGHPSNSKIEIRENQEITLECLVKN 47
Y P QF P PSS + I P+ S IE++EN+++ L C+V+N
Sbjct: 131 YLPSGTFIQFQPLKLIPSSLCGRLLRTTEVLITPKPNTSAIEVKENRKVNLRCVVEN 187
>sp|Q9MZ08|BCAM_BOVIN Basal cell adhesion molecule OS=Bos taurus GN=BCAM PE=2 SV=2
Length = 628
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 10 RLYQFAPPSSIEIVGHPSNSKIEIREN--QEITLECLVKNAKPAAKIVWYRGNTELKL 65
RL FA P + E+ P+ + + ++ QEI C +N PA +I+WYR L +
Sbjct: 140 RLKVFAKPEAPEV--SPNKGILSVMDDFAQEIA-TCSSRNGNPAPQIMWYRNGQPLAV 194
>sp|Q09147|FGFR2_DROME Fibroblast growth factor receptor homolog 2 OS=Drosophila
melanogaster GN=btl PE=2 SV=3
Length = 1052
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 14/62 (22%)
Query: 13 QFAPPSSIEIV-----------GHPSNSKIEIRENQEITLECLVKNAKPAAKIVW-YRGN 60
Q + P+ +E++ G+P N+ I + +N +++ECL++++ KI W ++GN
Sbjct: 223 QRSNPTQLEVISRKHTVPMLKPGYPRNTSIALGDN--VSIECLLEDSALEPKITWLHKGN 280
Query: 61 TE 62
+
Sbjct: 281 AD 282
>sp|Q6DJ83|CADM2_XENTR Cell adhesion molecule 2 OS=Xenopus tropicalis GN=cadm2 PE=2 SV=1
Length = 433
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 22 IVGHPSNSKIE-----IRENQEITLECLVKNAKPAAKIVWYRGNTEL 63
++G P N I + E I L C +KPAA I W++ + E+
Sbjct: 120 VLGVPENPHISGFTSPVMEGDTIQLTCKSSGSKPAADIRWFKNDQEI 166
>sp|Q62556|BT1A1_MOUSE Butyrophilin subfamily 1 member A1 OS=Mus musculus GN=Btn1a1 PE=1
SV=2
Length = 524
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 20 IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63
+ VG + ++EN E+ LEC P ++ W GN E+
Sbjct: 142 VAAVGSDPQISMTVQENGEMELECTSSGWYPEPQVQWRTGNREM 185
>sp|Q90304|CD166_CARAU CD166 antigen homolog OS=Carassius auratus GN=alcam PE=1 SV=2
Length = 555
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 19 SIEIVGHPSNSKIEIR------ENQEITL--ECLVKNAKPAAKIVWYRGNTEL 63
S+E+ H S I+ EN ++T EC+V+NA P A ++W + N L
Sbjct: 122 SVEVKVHKKPSAPVIKNNAKELENGKLTQLGECVVENANPPADLIWKKNNQTL 174
>sp|Q1WIM2|CADM2_RAT Cell adhesion molecule 2 OS=Rattus norvegicus GN=Cadm2 PE=1 SV=2
Length = 435
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 20 IEIVGHPSNSKIE-----IRENQEITLECLVKNAKPAAKIVWYRGNTELK 64
+ ++G P +I + E + L C +KPAA I W++ + E+K
Sbjct: 118 LTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIK 167
>sp|Q8N3J6|CADM2_HUMAN Cell adhesion molecule 2 OS=Homo sapiens GN=CADM2 PE=2 SV=1
Length = 435
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 20 IEIVGHPSNSKIE-----IRENQEITLECLVKNAKPAAKIVWYRGNTELK 64
+ ++G P +I + E + L C +KPAA I W++ + E+K
Sbjct: 118 LTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIK 167
>sp|P10721|KIT_HUMAN Mast/stem cell growth factor receptor Kit OS=Homo sapiens GN=KIT
PE=1 SV=1
Length = 976
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 27 SNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELKL 65
S + +RE +E T+ C +K+ + W R N++ KL
Sbjct: 217 SKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKL 255
>sp|Q8BLQ9|CADM2_MOUSE Cell adhesion molecule 2 OS=Mus musculus GN=Cadm2 PE=1 SV=2
Length = 435
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Query: 20 IEIVGHPSNSKIE-----IRENQEITLECLVKNAKPAAKIVWYRGNTELK 64
+ ++G P +I + E + L C +KPAA I W++ + E+K
Sbjct: 118 LTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIK 167
>sp|Q96RW7|HMCN1_HUMAN Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2
Length = 5635
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 11 LYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64
L PP IVG + ++++E Q +TL C V P +I W++ L+
Sbjct: 2472 LSVLVPP---HIVGENTLEDVKVKEKQSVTLTCEV-TGNPVPEITWHKDGQPLQ 2521
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 11 LYQFAPPSSIEIVGHPSNS--KIEIRENQEITLECLVKNAKPAAKIVWYR 58
L + PPS I H S S + +RE ++LEC NA P I WY+
Sbjct: 3050 LTVYVPPS---IKDHDSESLSVVNVREGTSVSLEC-ESNAVPPPVITWYK 3095
>sp|Q10656|EGL15_CAEEL Myoblast growth factor receptor egl-15 OS=Caenorhabditis elegans
GN=egl-15 PE=1 SV=1
Length = 1040
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 25 HPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64
H +N + E+ EI +C +K +A + WYR + LK
Sbjct: 37 HVANERYEVFLGDEIKFDCQTAASKISAFVEWYRNDKLLK 76
>sp|Q890P0|RL4_CLOTE 50S ribosomal protein L4 OS=Clostridium tetani (strain
Massachusetts / E88) GN=rplD PE=3 SV=1
Length = 206
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIV 55
+ P+ R Y A P S++ V S +++EN+ + LE L +A +IV
Sbjct: 90 FAPKPRDYSMAIPKSMKRVAMKSALSSKVQENEIVILESLEADAPKTKEIV 140
>sp|Q2HWD6|KIT_PIG Mast/stem cell growth factor receptor Kit OS=Sus scrofa GN=KIT PE=2
SV=1
Length = 972
Score = 29.3 bits (64), Expect = 8.0, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 27 SNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64
S + +RE +E + CL+K+ + +W R N++ K
Sbjct: 217 SKASYLLREGEEFAVMCLIKDVSSSVDSMWIRENSQTK 254
>sp|Q8K4F0|CD226_MOUSE CD226 antigen OS=Mus musculus GN=Cd226 PE=2 SV=1
Length = 333
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVW 56
GP + + S EI PS+S + Q++TL C + P +++W
Sbjct: 117 GPWEKKIKVVWSDSFEIAA-PSDSYLSAEPGQDVTLTCQLPRTWPVQQVIW 166
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,592,420
Number of Sequences: 539616
Number of extensions: 726209
Number of successful extensions: 2332
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2244
Number of HSP's gapped (non-prelim): 101
length of query: 65
length of database: 191,569,459
effective HSP length: 37
effective length of query: 28
effective length of database: 171,603,667
effective search space: 4804902676
effective search space used: 4804902676
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)