Query psy7728
Match_columns 65
No_of_seqs 154 out of 1003
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 17:17:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7728.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7728hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1iam_A ICAM-1, CD54, intercell 99.3 3.8E-12 1.3E-16 76.3 5.1 56 5-64 74-131 (185)
2 3bn3_B ICAM-5, intercellular a 99.3 6.5E-12 2.2E-16 75.9 4.8 56 5-64 77-134 (196)
3 1zxq_A ICAM-2, intercellular a 99.1 8.4E-11 2.9E-15 71.0 5.6 55 6-64 77-133 (192)
4 1mq8_A ICAM-1, intercellular a 99.1 1.8E-11 6.2E-16 77.3 2.7 56 5-64 74-131 (291)
5 1vca_A VCAM-D1,2, human vascul 99.1 2.3E-10 7.9E-15 67.6 5.7 56 4-64 79-136 (202)
6 2pet_A Lutheran blood group gl 99.0 5E-10 1.7E-14 65.7 5.5 58 5-64 104-162 (231)
7 1gsm_A Madcam-1, mucosal addre 99.0 9.1E-10 3.1E-14 67.0 6.2 54 4-64 84-141 (210)
8 2wng_A Tyrosine-protein phosph 99.0 2E-09 6.8E-14 66.4 7.3 56 5-64 105-161 (327)
9 2if7_A SLAM family member 6; N 98.9 3.8E-09 1.3E-13 61.8 7.2 52 8-63 99-151 (193)
10 1f97_A Junction adhesion molec 98.9 6E-09 2E-13 60.1 7.7 53 6-63 94-147 (212)
11 1dr9_A B7-1 (CD80), T lymphocy 98.9 2.5E-09 8.4E-14 62.0 6.0 52 7-64 98-149 (201)
12 3nl4_L Antigen binding fragmen 98.9 1.9E-09 6.6E-14 62.8 5.0 59 4-64 99-157 (213)
13 2zg1_A Sialic acid-binding IG- 98.9 1E-08 3.4E-13 59.6 6.8 51 7-62 114-167 (214)
14 3knb_A Titin; IG-like, titin, 98.8 5E-09 1.7E-13 56.2 4.9 35 29-64 13-47 (100)
15 2cr6_A KIAA1556 protein, obscu 98.8 1.8E-09 6.2E-14 58.7 3.0 53 7-64 3-55 (115)
16 1ugn_A LIR1, leukocyte immunog 98.8 2.1E-08 7.2E-13 58.2 7.3 55 4-63 86-140 (198)
17 2d3v_A Leukocyte immunoglobuli 98.8 1.4E-08 4.9E-13 58.9 6.6 54 5-63 86-139 (196)
18 1nbq_A JAM, junctional adhesio 98.8 2.3E-09 8E-14 61.7 2.9 54 6-64 97-150 (209)
19 1fnl_A Low affinity immunoglob 98.8 5.6E-08 1.9E-12 55.5 8.6 53 5-63 78-130 (175)
20 1nkr_A P58-CL42 KIR; inhibitor 98.8 2.5E-08 8.6E-13 58.1 7.2 55 4-63 93-147 (201)
21 3sgj_C Human FCG3A receptor; r 98.8 3.5E-08 1.2E-12 58.2 7.6 54 4-63 77-130 (204)
22 3jz7_A MCAR, CAR, coxsackievir 98.8 1.9E-08 6.5E-13 57.9 6.0 50 6-60 111-160 (214)
23 3knb_B Obscurin-like protein 1 98.8 1.2E-08 4E-13 55.5 4.8 34 30-64 22-55 (107)
24 1f2q_A High affinity immunoglo 98.8 5.2E-08 1.8E-12 55.5 7.7 54 5-64 75-128 (176)
25 3ry4_A Low affinity immunoglob 98.8 4.8E-08 1.7E-12 55.0 7.4 53 5-63 75-127 (170)
26 3mj8_L Stimulatory hamster ant 98.8 1.1E-08 3.6E-13 59.6 4.7 59 4-64 98-158 (213)
27 3bfo_A Mucosa-associated lymph 98.8 2E-08 6.9E-13 52.3 5.3 33 31-64 13-45 (91)
28 2lu7_A Obscurin-like protein 1 98.7 6.1E-09 2.1E-13 54.7 3.1 33 30-64 5-37 (84)
29 1e07_A Carcinoembryonic antige 98.7 3.2E-08 1.1E-12 65.8 7.3 53 6-63 192-244 (642)
30 3sob_L Antibody light chain; b 98.7 7.8E-09 2.7E-13 60.8 3.8 58 5-64 121-179 (237)
31 3sbw_C Programmed cell death 1 98.7 3.2E-08 1.1E-12 57.7 6.4 51 7-63 107-158 (222)
32 3s96_B 3B5H10 FAB light chain; 98.7 1.1E-08 3.9E-13 59.6 4.4 59 4-64 105-165 (218)
33 2bk8_A Connectin, M1, titin he 98.7 3.8E-08 1.3E-12 51.6 6.1 34 31-64 11-44 (97)
34 1z7z_I Intercellular adhesion 98.7 2E-08 7E-13 64.1 5.9 55 6-64 75-131 (450)
35 2cry_A KIN of IRRE-like protei 98.7 1.8E-09 6E-14 59.1 0.6 54 4-64 2-56 (122)
36 3r4d_A CEA-related cell adhesi 98.7 4.7E-08 1.6E-12 56.4 6.8 53 6-64 99-151 (208)
37 1rhf_A Tyrosine-protein kinase 98.7 1.6E-07 5.5E-12 53.3 8.9 54 5-64 87-141 (182)
38 3o3u_N Maltose-binding peripla 98.7 5E-08 1.7E-12 64.3 7.6 55 6-64 460-515 (581)
39 2yd6_A PTPRD protein; hydrolas 98.7 7.2E-08 2.4E-12 56.3 7.5 56 6-64 91-150 (212)
40 1lk3_L 9D7 light chain; antige 98.7 1.6E-08 5.4E-13 58.9 4.5 58 5-64 97-155 (210)
41 1dee_B IGM RF 2A2; FAB-IBP com 98.7 2E-08 6.9E-13 59.6 4.9 57 5-63 111-170 (223)
42 2xzc_L FAB A.17 light chain; i 98.7 1.4E-08 4.7E-13 59.5 4.0 58 5-64 100-158 (216)
43 3kvq_A Vascular endothelial gr 98.7 1.3E-08 4.6E-13 54.0 3.5 50 8-63 2-51 (108)
44 2c5d_C AXL oncogene, tyrosine- 98.7 8.8E-08 3E-12 55.0 7.2 53 6-64 96-149 (195)
45 3k0w_A Mucosa-associated lymph 98.7 1.4E-07 4.6E-12 55.5 8.1 56 6-64 93-160 (218)
46 3d9a_L Light chain of hyhel10 98.7 1.7E-08 6E-13 58.7 4.0 58 5-64 98-156 (213)
47 1c1e_H Catalytic antibody 1E9 98.7 1.3E-08 4.4E-13 59.7 3.5 57 5-63 109-167 (219)
48 1oll_A NK receptor; immune sys 98.7 6.3E-08 2.1E-12 56.0 6.3 55 4-63 84-138 (188)
49 1q9r_B S25-2 FAB (IGG1K) heavy 98.7 1.6E-08 5.3E-13 59.5 3.7 57 5-63 112-170 (222)
50 1e07_A Carcinoembryonic antige 98.7 1E-07 3.5E-12 63.4 8.0 54 6-64 548-601 (642)
51 2lvc_A Obscurin-like protein 1 98.7 1.3E-08 4.3E-13 54.2 2.9 32 31-64 16-47 (91)
52 1dn0_B IGM-kappa cold agglutin 98.7 6.1E-08 2.1E-12 58.0 6.1 57 5-63 110-170 (232)
53 2fbo_J V1V2;, variable region- 98.7 1.8E-08 6.1E-13 59.6 3.7 54 8-63 124-177 (250)
54 2v9r_A Roundabout homolog 1; p 98.7 1.9E-08 6.5E-13 58.0 3.8 55 6-64 100-154 (212)
55 1uct_A Immunoglobulin alpha FC 98.7 1E-07 3.5E-12 56.8 7.1 56 4-63 91-146 (218)
56 3ejj_X Macrophage colony-stimu 98.7 1.9E-07 6.6E-12 56.1 8.3 58 5-64 171-229 (289)
57 3r06_A Anti-mouse CD3epsilon a 98.7 2.3E-08 8E-13 58.1 4.1 58 5-64 98-156 (213)
58 1waa_A Titin; metal binding pr 98.7 8.3E-08 2.8E-12 50.9 6.0 32 31-64 15-46 (93)
59 1gl4_B Basement membrane-speci 98.7 6.5E-08 2.2E-12 50.8 5.4 32 29-60 18-49 (98)
60 2yd1_A Tyrosine-protein phosph 98.7 1.1E-07 3.7E-12 55.4 6.9 57 5-64 92-152 (212)
61 2oz4_A Intercellular adhesion 98.7 7.4E-08 2.5E-12 57.9 6.3 45 15-64 2-48 (265)
62 2dru_A Chimera of CD48 antigen 98.7 5.8E-08 2E-12 56.5 5.7 46 7-63 96-141 (180)
63 1epf_A NCAM, protein (neural c 98.6 9.3E-08 3.2E-12 54.5 6.3 52 6-63 90-141 (191)
64 2a38_A Titin; Z1Z2, structural 98.6 6.2E-08 2.1E-12 55.3 5.6 55 7-64 91-145 (194)
65 1g1c_A Immunoglobulin-like dom 98.6 6.6E-08 2.2E-12 50.6 5.2 34 30-64 14-47 (99)
66 1q0x_L FAB 9B1, light chain; a 98.6 5.7E-08 1.9E-12 56.5 5.2 58 5-64 100-159 (212)
67 1nfd_E H57 FAB; complex (immun 98.6 1.7E-08 5.7E-13 58.8 2.9 58 5-64 98-157 (212)
68 2j8h_A Titin, connectin; cardi 98.6 8.5E-09 2.9E-13 59.2 1.6 58 6-64 89-146 (197)
69 4i0k_A CD276 antigen; immunogl 98.6 1.9E-08 6.4E-13 58.8 2.9 55 6-63 98-153 (222)
70 2kdg_A Myotilin; immonoglobuli 98.6 5.6E-08 1.9E-12 50.9 4.5 34 30-64 14-47 (100)
71 3rjd_A High affinity immunoglo 98.6 2.9E-07 9.8E-12 54.5 8.0 53 5-63 72-124 (262)
72 1op3_H FAB 2G12, heavy chain; 98.6 3.2E-08 1.1E-12 58.7 3.8 56 5-62 113-170 (225)
73 2edh_A Obscurin; structural ge 98.6 2.4E-08 8.2E-13 53.8 3.0 53 5-64 7-59 (113)
74 3qp3_A Titin; I-SET IG-like, s 98.6 7.5E-08 2.6E-12 50.8 4.9 34 30-64 17-50 (103)
75 2edj_A Roundabout homolog 2; K 98.6 7.7E-08 2.6E-12 50.6 4.9 43 19-64 8-50 (100)
76 1wwc_A Protein (NT-3 growth fa 98.6 4.4E-08 1.5E-12 53.2 4.0 47 9-64 1-47 (118)
77 1mq8_A ICAM-1, intercellular a 98.6 4.7E-09 1.6E-13 66.2 -0.1 56 4-64 175-233 (291)
78 3qs7_E FL cytokine receptor; i 98.6 6.7E-08 2.3E-12 62.7 5.3 53 7-63 315-367 (423)
79 3p2t_A Leukocyte immunoglobuli 98.6 1.2E-07 4E-12 54.9 5.9 55 4-63 85-139 (196)
80 1u2h_A APEG-1, aortic preferen 98.6 8.8E-08 3E-12 50.1 4.9 33 31-64 15-47 (99)
81 2rik_A Titin; I-SET IG fold, p 98.6 1.9E-07 6.5E-12 56.1 7.0 53 6-64 182-234 (284)
82 1hng_A CD2; T lymphocyte adhes 98.6 1.5E-07 5.3E-12 54.3 6.3 47 7-64 91-137 (176)
83 2yd9_A Receptor-type tyrosine- 98.6 1.7E-07 5.7E-12 57.1 6.7 58 4-64 89-150 (304)
84 3d9a_H Heavy chain of hyhel10 98.6 3.8E-08 1.3E-12 57.4 3.6 56 5-62 103-160 (210)
85 3tv3_L PGT128 light chain, IG 98.6 5.5E-08 1.9E-12 56.6 4.2 59 4-64 95-155 (211)
86 2vr9_A Roundabout 1, ROBO; imm 98.6 3E-08 1E-12 57.7 3.0 55 6-64 97-151 (217)
87 3bkj_L WO2 IGG2A FAB fragment 98.6 5.3E-08 1.8E-12 58.4 4.2 58 5-64 136-194 (252)
88 3irg_A Titin; IG-like, titin, 98.6 1.1E-07 3.8E-12 49.5 4.9 35 29-64 13-47 (100)
89 2yd9_A Receptor-type tyrosine- 98.6 1.7E-07 5.7E-12 57.2 6.4 55 7-64 193-247 (304)
90 2yr3_A Myosin light chain kina 98.6 8.6E-09 2.9E-13 54.2 0.5 34 30-64 20-53 (99)
91 1bec_A 14.3.D T cell antigen r 98.6 4.9E-08 1.7E-12 58.3 3.8 59 5-64 103-165 (238)
92 2fbj_H IGA-kappa J539 FAB (hea 98.6 3.4E-08 1.2E-12 58.5 3.0 56 5-63 108-166 (220)
93 2wv3_A Neuroplastin; igcam, me 98.6 3.5E-07 1.2E-11 52.3 7.3 52 6-63 82-135 (190)
94 2v5t_A NCAM2, N-CAM 2, neural 98.6 1E-07 3.5E-12 54.1 4.9 53 8-64 88-140 (189)
95 2cqv_A MLCK, myosin light chai 98.6 8.1E-08 2.8E-12 51.7 4.3 34 30-64 16-49 (114)
96 1qz1_A Neural cell adhesion mo 98.6 1.3E-07 4.6E-12 56.8 5.6 53 8-64 186-238 (291)
97 3bae_H WO2 IGG2A FAB fragment 98.6 4.6E-08 1.6E-12 58.1 3.4 56 5-62 115-172 (228)
98 4dzb_B Vbeta2 (MAIT T cell rec 98.6 4.4E-08 1.5E-12 58.3 3.2 59 5-64 107-169 (246)
99 1fhg_A Telokin; immunoglobulin 98.6 5.1E-08 1.7E-12 55.3 3.4 34 30-64 50-83 (154)
100 1wit_A Twitchin 18TH IGSF modu 98.5 6.4E-08 2.2E-12 50.4 3.5 34 29-63 10-45 (93)
101 1pz5_B Heavy chain of FAB (SYA 98.5 8.4E-08 2.9E-12 56.3 4.3 55 5-61 110-166 (220)
102 2v5m_A Dscam; neurobiology SPL 98.5 1.5E-07 5E-12 58.8 5.6 54 5-64 296-349 (388)
103 2gi7_A GPVI protein; IG-like d 98.5 2.2E-07 7.6E-12 53.5 6.0 55 4-63 79-133 (184)
104 3bqu_C 3H6 FAB light chain; be 98.5 2.4E-08 8.3E-13 58.9 1.9 58 5-64 120-178 (233)
105 1mju_H Immunoglobulin MS6-12; 98.5 5.9E-08 2E-12 57.8 3.5 57 5-63 106-164 (227)
106 2dm2_A Palladin; beta-sandwich 98.5 1.2E-07 4.2E-12 50.6 4.5 34 30-64 17-50 (110)
107 2e7c_A Myosin-binding protein 98.5 1.3E-07 4.4E-12 51.3 4.6 35 29-64 32-66 (118)
108 2rik_A Titin; I-SET IG fold, p 98.5 1.2E-07 4E-12 57.0 4.9 55 5-64 87-141 (284)
109 3caf_A Fibroblast growth facto 98.5 8.7E-08 3E-12 50.3 3.7 35 29-64 16-50 (100)
110 3rbs_A Myomesin-1; immunoglobu 98.5 2E-07 6.9E-12 55.2 5.7 34 31-64 126-159 (207)
111 1p6f_A NKP46, natural cytotoxi 98.5 3.5E-07 1.2E-11 55.6 6.8 55 4-63 87-141 (242)
112 2v9t_A Roundabout homolog 1; s 98.5 7.5E-08 2.6E-12 52.0 3.5 34 30-64 18-51 (117)
113 1c5d_H Monoclonal antibody aga 98.5 7.9E-08 2.7E-12 56.6 3.8 56 5-62 107-164 (215)
114 1b6u_A KIR2DL3, P58 killer cel 98.5 2.2E-07 7.6E-12 57.1 5.9 55 4-63 92-146 (257)
115 3so5_A LIG-3, leucine-rich rep 98.5 5.7E-07 2E-11 47.2 6.8 43 20-64 11-54 (112)
116 3bp6_B Programmed cell death 1 98.5 9.4E-08 3.2E-12 55.2 4.0 50 6-62 94-143 (202)
117 3puc_A Titin; I-SET IG-like do 98.5 1.7E-07 5.9E-12 48.8 4.7 34 30-64 15-48 (99)
118 2kkq_A Myotilin; unknown funct 98.5 2.2E-07 7.6E-12 50.6 5.3 34 30-64 24-57 (116)
119 3lcy_A Titin; A-BAND, IG tande 98.5 1.3E-07 4.6E-12 53.8 4.5 56 6-64 90-145 (197)
120 1x44_A Myosin-binding protein 98.5 1.4E-07 4.8E-12 50.0 4.2 33 30-64 16-48 (103)
121 2cpc_A KIAA0657 protein; immun 98.5 3.6E-07 1.2E-11 48.9 5.9 33 30-64 22-54 (113)
122 2yuz_A Myosin-binding protein 98.5 1.4E-07 4.8E-12 50.5 4.2 32 30-64 16-47 (100)
123 2v44_A NCAM2, neural cell adhe 98.5 3.2E-07 1.1E-11 52.3 5.9 52 6-63 86-137 (189)
124 4fa8_A Secreted protein BARF1; 98.5 3.8E-08 1.3E-12 58.5 2.0 52 5-62 95-146 (203)
125 3irg_B Obscurin-like protein 1 98.5 2E-07 6.9E-12 49.3 4.7 34 30-64 22-55 (107)
126 2va4_A NCAM2, N-CAM 2, neural 98.5 2.6E-07 9E-12 52.4 5.4 43 21-64 4-46 (192)
127 3q5y_A TCR N15 beta; IG, T cel 98.5 7.8E-08 2.7E-12 57.1 3.2 60 4-64 103-166 (240)
128 1wwb_X Protein (brain derived 98.5 1.2E-07 3.9E-12 50.8 3.5 30 34-64 14-43 (103)
129 4ei6_B Vbeta16 XV19 type II na 98.5 8.8E-08 3E-12 56.9 3.2 60 4-64 105-168 (245)
130 3p3y_A Neurofascin; IG domains 98.5 2.1E-07 7.3E-12 58.1 5.1 54 5-64 301-354 (404)
131 2c1o_A IGK-C protein; FAB frag 98.5 8.4E-08 2.9E-12 57.3 3.0 58 5-64 140-198 (254)
132 3pl6_D MBP peptide / T-cell re 98.5 6E-08 2E-12 58.5 2.4 60 4-64 127-190 (268)
133 3nfj_J T cell receptor beta ch 98.5 7.1E-08 2.4E-12 57.4 2.6 59 5-64 106-168 (245)
134 3m8o_H Immunoglobulin A1 heavy 98.5 8.3E-08 2.8E-12 56.4 2.8 56 5-63 109-167 (221)
135 3ry4_A Low affinity immunoglob 98.5 4.9E-07 1.7E-11 50.8 5.9 44 19-64 4-47 (170)
136 3qib_D 2B4 beta chain; IG doma 98.5 7.6E-08 2.6E-12 58.2 2.7 59 5-64 131-193 (270)
137 2e6q_A Obscurin-like protein 1 98.5 2E-07 6.9E-12 51.6 4.2 31 31-64 18-48 (112)
138 1hxm_B Gamma-delta T-cell rece 98.5 8.6E-08 2.9E-12 57.4 2.8 54 5-61 113-173 (242)
139 1bih_A Hemolin; insect immunit 98.5 2.8E-07 9.6E-12 57.5 5.2 52 8-64 300-351 (395)
140 2eo9_A Roundabout homolog 1; b 98.5 1.5E-07 5E-12 51.0 3.5 34 30-64 17-50 (118)
141 3kld_A Contactin 4, axcam, BIG 98.5 2.4E-07 8.3E-12 58.5 5.0 53 6-64 285-337 (384)
142 2j8h_A Titin, connectin; cardi 98.5 9.2E-07 3.2E-11 50.5 6.9 34 30-64 13-46 (197)
143 2rcj_C Light chain; immunoglob 98.4 4.9E-07 1.7E-11 58.9 6.4 57 5-63 99-157 (523)
144 1oga_E TRBC1, T-cell receptor 98.4 1.1E-07 3.8E-12 57.3 3.1 59 5-64 105-167 (252)
145 1za6_B IGG heavy chain; immuno 98.4 1E-07 3.5E-12 59.5 3.0 57 4-62 104-162 (344)
146 3pv7_A B7-H6, IG-like domain-c 98.4 9.2E-08 3.1E-12 56.9 2.7 50 6-61 109-159 (248)
147 1pd6_A Cardiac MYBP-C;, myosin 98.4 2.6E-07 8.8E-12 49.7 4.2 33 30-64 25-57 (104)
148 4fom_A Poliovirus receptor-rel 98.4 6.9E-08 2.3E-12 58.9 2.1 55 6-63 102-156 (308)
149 2k1m_A Myosin-binding protein 98.4 1.7E-07 5.8E-12 49.1 3.3 33 30-64 17-49 (95)
150 3rbs_A Myomesin-1; immunoglobu 98.4 3.4E-07 1.2E-11 54.2 5.0 34 31-64 12-45 (207)
151 3qs9_E FL cytokine receptor; i 98.4 2.8E-07 9.7E-12 61.4 5.1 54 7-64 315-368 (527)
152 2eo1_A OBSCN protein, cDNA FLJ 98.4 1.5E-07 5.2E-12 49.7 3.1 33 30-64 20-52 (102)
153 1qgc_4 Protein (immunoglobulin 98.4 2E-07 6.9E-12 59.1 4.2 58 5-64 102-160 (438)
154 2ens_A Advanced glycosylation 98.4 2.7E-08 9.2E-13 52.3 0.1 32 32-64 21-52 (96)
155 2wim_A N-CAM 2, NCAM2, neural 98.4 2.3E-07 7.8E-12 55.8 4.1 53 8-64 184-236 (291)
156 2wbj_D OB TCR; transmembrane, 98.4 8E-08 2.7E-12 58.6 2.1 59 5-64 132-194 (279)
157 1bih_A Hemolin; insect immunit 98.4 2.5E-07 8.5E-12 57.8 4.3 49 11-64 1-49 (395)
158 2xqy_G A13-D6.3 monoclonal ant 98.4 1.8E-07 6.2E-12 57.2 3.6 57 5-63 114-172 (261)
159 3grw_A Fibroblast growth facto 98.4 5.5E-07 1.9E-11 52.9 5.5 56 6-63 99-159 (241)
160 2iep_A Muscle-specific kinase 98.4 5.4E-07 1.8E-11 51.2 5.3 51 8-64 92-142 (192)
161 3b43_A Titin; I-SET IG fold, e 98.4 5.5E-07 1.9E-11 59.7 6.0 54 5-64 373-426 (570)
162 2yd1_A Tyrosine-protein phosph 98.4 1.3E-06 4.3E-11 50.8 6.9 42 20-64 7-48 (212)
163 1ccz_A Protein (CD58); LFA-3, 98.4 1.4E-06 4.9E-11 50.1 7.1 46 7-63 86-131 (171)
164 1he7_A High affinity nerve gro 98.4 6.1E-07 2.1E-11 50.8 5.2 29 35-64 14-42 (126)
165 2dm3_A KIAA0992 protein, palla 98.4 1.6E-07 5.5E-12 50.0 2.6 33 30-63 18-50 (110)
166 4dep_C Interleukin-1 receptor 98.4 1.2E-07 4.2E-12 58.6 2.4 59 6-64 208-272 (349)
167 1cs6_A Axonin-1; neural cell a 98.4 4.9E-07 1.7E-11 56.4 5.2 54 5-64 283-336 (382)
168 3to4_D NKT vbeta2 (mouse varia 98.4 1.5E-07 5E-12 56.6 2.7 59 5-64 106-168 (253)
169 2ckn_A Basic fibroblast growth 98.4 1.9E-07 6.6E-12 48.9 2.8 32 30-63 18-49 (95)
170 2j6e_L IGM, FAB light chain; a 98.4 3.4E-08 1.2E-12 58.1 -0.2 58 5-64 120-179 (234)
171 4fqp_A Poliovirus receptor; im 98.4 7.9E-08 2.7E-12 58.9 1.4 50 9-63 209-259 (313)
172 2jll_A NCAM2, neural cell adhe 98.4 5.4E-07 1.8E-11 56.2 5.2 54 5-64 89-142 (389)
173 2eny_A Obscurin; beta-sandwich 98.4 9.6E-08 3.3E-12 51.3 1.6 34 30-63 17-50 (104)
174 3vh8_G Killer cell immunoglobu 98.4 2.1E-06 7.2E-11 52.6 7.8 55 4-63 104-158 (316)
175 2c5d_C AXL oncogene, tyrosine- 98.4 3.8E-07 1.3E-11 52.3 4.2 35 30-64 11-45 (195)
176 3vh8_G Killer cell immunoglobu 98.4 8.1E-07 2.8E-11 54.5 5.9 54 5-63 205-258 (316)
177 3p73_B Beta-2-microglobulin; I 98.4 6.7E-07 2.3E-11 48.3 4.9 31 34-64 16-47 (99)
178 2yuv_A Myosin-binding protein 98.4 3.2E-07 1.1E-11 48.4 3.5 32 31-64 18-49 (100)
179 1itb_B Type 1 interleukin-1 re 98.4 1.8E-06 6.3E-11 52.5 7.3 45 18-64 207-251 (315)
180 3ojm_B Fibroblast growth facto 98.4 6.4E-07 2.2E-11 52.0 5.0 57 6-63 103-163 (231)
181 3mjg_X Beta-type platelet-deri 98.4 1.5E-06 5E-11 52.4 6.8 51 6-61 169-220 (289)
182 3u83_A Poliovirus receptor-rel 98.4 7.2E-07 2.5E-11 54.6 5.4 52 5-59 119-173 (331)
183 3bn9_D E2 FAB heavy chain; ant 98.4 8E-08 2.7E-12 58.9 0.9 56 5-62 118-175 (257)
184 2r15_A Myomesin-1; sarcomeric 98.4 1.1E-06 3.9E-11 50.6 5.8 35 29-64 125-159 (212)
185 2e6p_A Obscurin-like protein 1 98.4 5.3E-07 1.8E-11 47.7 4.0 32 31-64 20-51 (104)
186 3b5h_A Cervical EMMPRIN, HAB18 98.4 2.2E-06 7.6E-11 48.6 6.9 47 6-58 73-120 (184)
187 2y25_A Myomesin; structural pr 98.4 1E-06 3.6E-11 53.4 5.8 34 31-64 16-49 (317)
188 2ghw_B Anti-SARS SCFV antibody 98.3 1.5E-06 5.1E-11 51.6 6.4 54 5-61 109-176 (247)
189 2e7b_A Obscurin; IG-like domai 98.3 4.7E-07 1.6E-11 47.8 3.7 32 30-63 17-48 (103)
190 3cx2_A Myosin-binding protein 98.3 1E-06 3.4E-11 47.2 4.9 30 30-60 13-45 (108)
191 3eow_R Poliovirus receptor; im 98.3 1.2E-07 4.2E-12 55.5 1.3 49 6-60 106-155 (221)
192 1k5n_B Beta-2-microglobulin, l 98.3 6.5E-07 2.2E-11 48.4 4.0 32 33-64 16-48 (100)
193 3b43_A Titin; I-SET IG fold, e 98.3 1.4E-06 4.9E-11 57.7 6.4 56 6-64 184-239 (570)
194 3liz_H 4C3 monoclonal antibody 98.3 4.5E-07 1.5E-11 54.7 3.7 55 5-61 109-165 (253)
195 3sgj_C Human FCG3A receptor; r 98.3 1.6E-06 5.5E-11 51.0 6.0 43 19-64 7-50 (204)
196 2vr9_A Roundabout 1, ROBO; imm 98.3 1.7E-06 5.7E-11 50.2 6.0 42 20-64 10-51 (217)
197 3qs7_E FL cytokine receptor; i 98.3 7.6E-07 2.6E-11 57.7 4.9 49 8-63 221-269 (423)
198 2nzi_A Titin; IG-domain, FNIII 98.3 2.7E-06 9.1E-11 51.5 7.0 34 30-64 13-46 (305)
199 2edf_A Obscurin; beta-sandwich 98.3 2.4E-07 8.1E-12 49.0 2.1 31 31-63 18-48 (103)
200 3nl4_H Antigen binding fragmen 98.3 3.4E-07 1.2E-11 53.6 3.0 56 5-62 105-162 (215)
201 2ocw_A Polymeric-immunoglobuli 98.3 1.6E-06 5.5E-11 56.9 6.4 54 5-63 431-487 (585)
202 1lk2_B Beta-2-microglobulin; c 98.3 7.4E-07 2.5E-11 48.1 4.0 32 33-64 15-47 (99)
203 3gbl_A BETA2-microglobulin; im 98.3 1.4E-06 4.7E-11 46.9 5.1 31 34-64 16-47 (97)
204 1gxe_A Myosin binding protein 98.3 3.9E-07 1.3E-11 51.8 3.0 32 28-60 25-56 (139)
205 3laf_A Deleted in colorectal c 98.3 2.1E-06 7.2E-11 53.7 6.6 59 5-64 204-263 (403)
206 3omz_A Human vdelta1 gamma del 98.3 1.5E-06 5.3E-11 52.1 5.8 54 4-59 107-174 (259)
207 3u83_A Poliovirus receptor-rel 98.3 1.2E-07 4E-12 58.1 0.8 54 5-63 220-274 (331)
208 1qgc_4 Protein (immunoglobulin 98.3 6.6E-07 2.3E-11 56.7 4.2 57 5-63 328-386 (438)
209 3oq3_B IFN-alpha/beta binding 98.3 2.9E-06 1E-10 52.4 7.0 53 9-63 218-273 (329)
210 3p3y_A Neurofascin; IG domains 98.3 3.4E-07 1.2E-11 57.2 2.7 51 7-61 106-156 (404)
211 3r08_E T-cell surface glycopro 98.3 6E-07 2E-11 47.5 3.2 30 32-64 10-39 (82)
212 2a38_A Titin; Z1Z2, structural 98.3 9.7E-07 3.3E-11 50.2 4.3 34 30-64 14-47 (194)
213 1rhf_A Tyrosine-protein kinase 98.3 2E-06 7E-11 48.6 5.7 34 30-64 11-44 (182)
214 2dku_A KIAA1556 protein; beta- 98.3 8.4E-07 2.9E-11 46.8 3.8 33 30-64 17-49 (103)
215 1qz1_A Neural cell adhesion mo 98.3 1.2E-06 4.2E-11 52.6 4.9 51 7-63 91-141 (291)
216 1nct_A Titin; cell adhesion, g 98.3 8.9E-08 3E-12 51.4 -0.2 33 30-63 23-55 (106)
217 3mtr_A N-CAM-1, NCAM-1, neural 98.3 1.5E-06 5E-11 50.7 5.1 34 30-64 27-60 (215)
218 1hnf_A CD2; T lymphocyte adhes 98.3 2.1E-06 7.2E-11 50.3 5.7 45 8-63 97-141 (182)
219 1nkr_A P58-CL42 KIR; inhibitor 98.3 1.2E-06 4E-11 50.9 4.6 41 18-63 7-47 (201)
220 2va4_A NCAM2, N-CAM 2, neural 98.3 2.2E-06 7.6E-11 48.5 5.6 50 7-63 86-137 (192)
221 2yd6_A PTPRD protein; hydrolas 98.3 1.7E-06 5.9E-11 50.3 5.2 33 31-64 16-48 (212)
222 2wv3_A Neuroplastin; igcam, me 98.3 2.7E-06 9.4E-11 48.5 6.0 33 31-64 12-47 (190)
223 3qs9_E FL cytokine receptor; i 98.3 9E-07 3.1E-11 59.0 4.4 49 8-63 221-269 (527)
224 3qr2_A Basigin; CD147, EMMPRIN 98.3 4.1E-07 1.4E-11 50.4 2.4 33 30-63 30-62 (137)
225 1ypz_F T-cell receptor gamma c 98.3 2.7E-07 9.3E-12 55.0 1.7 55 5-63 109-174 (230)
226 2edk_A Myosin-binding protein 98.3 3.5E-07 1.2E-11 48.3 1.9 32 31-64 18-49 (101)
227 1f3r_B FV antibody fragment; I 98.3 1.5E-06 5.1E-11 52.3 4.9 56 5-61 113-180 (257)
228 2iep_A Muscle-specific kinase 98.2 8.9E-07 3E-11 50.3 3.6 35 29-64 15-49 (192)
229 3laf_A Deleted in colorectal c 98.2 1.5E-06 5E-11 54.4 4.9 35 30-64 30-64 (403)
230 1fnl_A Low affinity immunoglob 98.2 1.8E-06 6.1E-11 49.1 4.9 33 31-64 17-50 (175)
231 2y23_A Myomesin; structural pr 98.2 2.6E-06 8.7E-11 51.5 5.8 35 30-64 116-150 (312)
232 2y23_A Myomesin; structural pr 98.2 3E-06 1E-10 51.2 6.1 35 30-64 10-44 (312)
233 4fqp_A Poliovirus receptor; im 98.2 4.6E-07 1.6E-11 55.5 2.4 53 6-63 107-159 (313)
234 2dlt_A Myosin binding protein 98.2 6.8E-07 2.3E-11 47.5 2.8 32 31-64 18-49 (106)
235 4hwu_A Fibroblast growth facto 98.2 1.6E-06 5.5E-11 45.1 4.2 32 30-64 10-41 (95)
236 2dav_A SLOW MYBP-C, myosin-bin 98.2 2E-06 6.9E-11 48.6 4.9 30 31-60 17-48 (126)
237 2x1w_L Vascular endothelial gr 98.2 3.7E-06 1.3E-10 49.2 6.2 54 7-62 93-147 (213)
238 1z7z_I Intercellular adhesion 98.2 5.3E-06 1.8E-10 52.9 7.4 54 6-64 177-233 (450)
239 3rjd_A High affinity immunoglo 98.2 4E-06 1.4E-10 49.5 6.3 56 5-64 157-217 (262)
240 3kld_A Contactin 4, axcam, BIG 98.2 8.5E-07 2.9E-11 56.0 3.6 30 34-64 21-50 (384)
241 1svz_A Immunoglobulin;, single 98.2 4.5E-06 1.5E-10 49.6 6.6 52 5-59 103-166 (247)
242 1f2q_A High affinity immunoglo 98.2 1.8E-06 6.1E-11 49.1 4.6 34 31-64 14-47 (176)
243 3jts_B Beta-2-microglobulin; a 98.2 2.4E-06 8.1E-11 47.8 4.9 32 33-64 35-67 (119)
244 2ec8_A MAST/stem cell growth f 98.2 1.3E-06 4.6E-11 56.8 4.4 56 6-64 300-356 (524)
245 3o81_A Beta-2-microglobulin; I 98.2 2.4E-06 8.1E-11 47.8 4.9 31 34-64 36-67 (119)
246 3s97_C Contactin-1; carbonic a 98.2 4.3E-06 1.5E-10 47.5 6.1 34 30-64 122-155 (201)
247 1wio_A CD4, T-cell surface gly 98.2 5.7E-07 1.9E-11 56.2 2.5 48 8-63 171-222 (363)
248 3qhz_H Human monoclonal antibo 98.2 1E-06 3.5E-11 52.2 3.5 56 5-62 117-174 (232)
249 2wqr_A IG epsilon chain C regi 98.2 3.1E-06 1.1E-10 52.2 5.8 30 35-64 233-263 (323)
250 1hzh_H IGG, immunoglobulin hea 98.2 1.9E-06 6.6E-11 55.4 5.0 56 5-62 117-174 (457)
251 2p1y_A Bispecific alpha/beta T 98.2 4.6E-06 1.6E-10 49.1 6.3 53 5-60 104-165 (238)
252 1bii_B Beta-2 microglobulin, M 98.2 1.6E-06 5.6E-11 48.4 4.1 32 33-64 35-67 (119)
253 1ry7_B FGFR-3, fibroblast grow 98.2 7E-07 2.4E-11 54.8 2.7 51 6-58 207-258 (334)
254 1epf_A NCAM, protein (neural c 98.2 2.6E-06 9.1E-11 48.4 5.0 34 31-64 12-46 (191)
255 1qok_A MFE-23 recombinant anti 98.2 3.5E-06 1.2E-10 51.5 5.8 53 5-61 136-202 (282)
256 2ny1_B T-cell surface glycopro 98.2 8.6E-07 3E-11 50.5 2.9 30 32-62 108-137 (184)
257 2nzi_A Titin; IG-domain, FNIII 98.2 1.8E-07 6.1E-12 56.7 -0.0 57 6-63 89-145 (305)
258 2ocw_A Polymeric-immunoglobuli 98.2 4.1E-06 1.4E-10 55.0 6.4 51 6-61 102-152 (585)
259 4frw_A Poliovirus receptor-rel 98.2 2.6E-06 9E-11 48.6 4.9 32 31-63 128-159 (218)
260 2vol_A Murine IGG FC; FC, zinc 98.2 1.5E-06 5.2E-11 50.8 3.9 31 34-64 122-153 (207)
261 2cr3_A Basic fibroblast growth 98.2 4.3E-07 1.5E-11 47.9 1.3 31 31-63 13-43 (99)
262 1nqb_A Single-chain antibody f 98.2 2.8E-06 9.6E-11 51.3 5.1 52 5-61 110-167 (256)
263 2rgs_A I, IG gamma-2B heavy ch 98.2 1.4E-06 5E-11 51.4 3.7 31 34-64 130-161 (218)
264 3lcy_A Titin; A-BAND, IG tande 98.2 2.6E-06 8.8E-11 48.3 4.7 33 30-63 16-48 (197)
265 3auv_A SC-DSFV derived from th 98.2 4.7E-06 1.6E-10 50.6 6.1 52 5-59 109-173 (276)
266 3k0w_A Mucosa-associated lymph 98.2 3.9E-06 1.3E-10 49.2 5.6 34 30-64 27-60 (218)
267 4dep_C Interleukin-1 receptor 98.2 3.6E-06 1.2E-10 52.0 5.6 56 8-64 108-167 (349)
268 2gjj_A A21 single-chain antibo 98.2 1E-05 3.4E-10 49.1 7.5 52 5-59 108-177 (264)
269 3p2t_A Leukocyte immunoglobuli 98.2 3.4E-06 1.2E-10 48.6 5.1 40 19-63 5-44 (196)
270 4f80_A Butyrophilin subfamily 98.2 3.7E-06 1.3E-10 49.4 5.3 30 31-60 128-157 (226)
271 1iga_A IGA1; immunoglobulin; N 98.2 3.9E-06 1.4E-10 54.3 5.9 54 5-61 112-168 (475)
272 3dmk_A DOWN syndrome cell adhe 98.2 2.1E-06 7.3E-11 58.5 4.8 52 8-63 610-661 (816)
273 3umt_A SCFV heavy chain and li 98.2 6.9E-06 2.4E-10 49.2 6.5 53 4-59 110-175 (256)
274 2w59_A IGY FCU3-4; immunoglobu 98.2 4E-06 1.4E-10 50.0 5.5 29 36-64 133-162 (231)
275 2rcj_C Light chain; immunoglob 98.2 1.8E-06 6.3E-11 56.1 4.2 32 33-64 331-365 (523)
276 2oz4_A Intercellular adhesion 98.2 4.1E-06 1.4E-10 50.2 5.5 48 6-63 88-135 (265)
277 3juy_B 3B3 single chain varian 98.2 9.7E-06 3.3E-10 48.5 7.1 52 5-58 123-186 (256)
278 3ux9_B SCFV antibody; five hel 98.2 7.2E-06 2.5E-10 48.9 6.5 53 4-59 102-173 (256)
279 1ow0_A IG alpha-1 chain C regi 98.2 1.6E-06 5.4E-11 51.1 3.5 32 33-64 119-151 (214)
280 3u2s_H PG9 heavy chain; greek 98.2 1.4E-06 4.7E-11 52.8 3.2 57 4-62 125-183 (248)
281 3grw_A Fibroblast growth facto 98.2 2.8E-06 9.6E-11 49.8 4.5 35 29-64 23-57 (241)
282 2vsd_A CHIR AB1; immune system 98.2 4.4E-06 1.5E-10 44.8 4.9 40 19-63 5-44 (105)
283 2o26_X MAST/stem cell growth f 98.2 6.8E-06 2.3E-10 49.6 6.3 54 6-62 174-229 (290)
284 2ifg_A High affinity nerve gro 98.1 3.9E-07 1.3E-11 57.0 0.7 49 6-64 240-288 (347)
285 1igy_B IGG1 intact antibody MA 98.1 1.1E-06 3.8E-11 56.2 2.8 56 5-62 104-161 (434)
286 2edn_A Myosin-binding protein 98.1 1.4E-06 4.7E-11 48.7 2.8 31 30-60 21-53 (118)
287 2v9r_A Roundabout homolog 1; p 98.1 1.9E-06 6.4E-11 49.5 3.5 34 30-64 18-51 (212)
288 2znx_A SCFV; fluorotryptohpan, 98.1 4.7E-06 1.6E-10 49.7 5.3 52 5-59 98-161 (242)
289 4hwn_A FC receptor-like A; FCR 98.1 4.7E-06 1.6E-10 45.0 4.9 41 19-63 8-53 (108)
290 2jll_A NCAM2, neural cell adhe 98.1 8.7E-06 3E-10 50.7 6.7 32 31-63 10-43 (389)
291 3gkz_A Anti-methamphetamine si 98.1 9.3E-06 3.2E-10 48.5 6.5 52 5-59 116-179 (257)
292 1igt_B IGG2A intact antibody - 98.1 2E-06 7E-11 55.0 3.7 56 5-62 108-165 (444)
293 3ojm_B Fibroblast growth facto 98.1 2.2E-06 7.7E-11 49.7 3.5 34 30-64 28-61 (231)
294 1moe_A Anti-CEA MAB T84.66; an 98.1 1.6E-05 5.4E-10 46.8 7.2 52 5-59 102-158 (240)
295 3tv3_H PGT128 heavy chain, IG 98.1 1.7E-06 5.7E-11 51.8 2.9 56 5-62 125-182 (239)
296 2wim_A N-CAM 2, NCAM2, neural 98.1 5.1E-06 1.7E-10 49.9 4.9 51 7-63 89-139 (291)
297 1sy6_A T-cell surface glycopro 98.1 7.7E-06 2.6E-10 48.1 5.5 28 34-64 126-153 (204)
298 3ejj_X Macrophage colony-stimu 98.1 2.3E-06 8E-11 51.3 3.3 54 6-63 78-132 (289)
299 2wng_A Tyrosine-protein phosph 98.1 2.1E-06 7.1E-11 52.8 3.1 32 33-64 232-264 (327)
300 3b5h_A Cervical EMMPRIN, HAB18 98.1 5.4E-06 1.8E-10 47.0 4.6 33 32-64 9-42 (184)
301 2gi7_A GPVI protein; IG-like d 98.1 1.1E-05 3.8E-10 46.3 6.0 37 20-61 9-45 (184)
302 2d3v_A Leukocyte immunoglobuli 98.1 7.5E-06 2.6E-10 47.2 5.2 39 20-63 6-44 (196)
303 1ry7_B FGFR-3, fibroblast grow 98.1 1.4E-06 4.9E-11 53.4 2.2 33 31-64 133-165 (334)
304 2y25_A Myomesin; structural pr 98.1 3.7E-06 1.3E-10 50.9 4.0 35 29-64 230-264 (317)
305 2v44_A NCAM2, neural cell adhe 98.1 6.1E-06 2.1E-10 46.8 4.5 41 10-63 2-43 (189)
306 2gki_A Nuclease; anti-DNA anti 98.1 5.4E-06 1.8E-10 51.0 4.5 52 5-59 132-202 (291)
307 2r15_A Myomesin-1; sarcomeric 98.1 7.1E-06 2.4E-10 47.1 4.8 31 34-64 15-45 (212)
308 4dkd_C Macrophage colony-stimu 98.0 6.1E-06 2.1E-10 49.5 4.6 56 6-63 172-228 (292)
309 1jbj_A CD3 epsilon and gamma e 98.0 2.4E-06 8.2E-11 49.4 2.7 28 33-64 119-146 (186)
310 1uct_A Immunoglobulin alpha FC 98.0 1.5E-06 5.2E-11 51.7 1.9 39 19-62 9-47 (218)
311 4f80_A Butyrophilin subfamily 98.0 1.2E-05 4.3E-10 47.1 5.8 29 31-60 14-45 (226)
312 1oll_A NK receptor; immune sys 98.0 1.8E-05 6.2E-10 45.5 6.4 39 20-63 5-43 (188)
313 2v5m_A Dscam; neurobiology SPL 98.0 6.1E-06 2.1E-10 51.4 4.5 33 30-63 13-46 (388)
314 1cs6_A Axonin-1; neural cell a 98.0 2.3E-06 7.7E-11 53.4 2.5 53 6-62 90-142 (382)
315 1sy6_A T-cell surface glycopro 98.0 4E-06 1.4E-10 49.3 3.4 28 33-64 15-42 (204)
316 1zvo_C Myeloma immunoglobulin 98.0 1.2E-05 4.2E-10 53.0 6.0 32 33-64 309-341 (512)
317 3dmk_A DOWN syndrome cell adhe 98.0 1.5E-05 5E-10 54.4 6.5 54 8-64 418-471 (816)
318 1l6x_A Immunoglobulin gamma-1 98.0 3.9E-06 1.3E-10 49.0 3.2 31 34-64 16-49 (207)
319 1l6x_A Immunoglobulin gamma-1 98.0 5.2E-06 1.8E-10 48.4 3.7 30 35-64 123-153 (207)
320 3o4o_C Interleukin-1 receptor 98.0 5.9E-07 2E-11 55.3 -0.5 56 6-64 108-167 (339)
321 4fom_A Poliovirus receptor-rel 98.0 1.4E-07 4.8E-12 57.5 -3.3 50 9-63 204-254 (308)
322 1i1c_A IGG2A, IG gamma-2A chai 98.0 5.4E-06 1.9E-10 50.0 3.8 31 34-64 136-167 (239)
323 2yz1_A Tyrosine-protein phosph 98.0 8.4E-06 2.9E-10 44.1 4.2 31 30-60 16-46 (120)
324 2jju_A Signal regulatory prote 98.0 6.3E-06 2.2E-10 45.4 3.6 31 30-60 12-42 (127)
325 2rgs_A I, IG gamma-2B heavy ch 98.0 4E-06 1.4E-10 49.5 3.0 31 33-63 23-56 (218)
326 1ugn_A LIR1, leukocyte immunog 98.0 1.2E-05 4E-10 46.4 4.9 39 20-63 6-44 (198)
327 1jhl_L IGG1-kappa D11.15 FV (l 98.0 1.3E-05 4.6E-10 42.6 4.8 30 30-60 10-39 (108)
328 3m45_A Cell adhesion molecule 98.0 1.3E-05 4.3E-10 41.9 4.6 31 30-61 15-45 (108)
329 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.0 3.2E-05 1.1E-09 46.3 6.9 51 5-59 106-173 (256)
330 2dm7_A KIAA1556 protein; beta- 98.0 3.1E-06 1.1E-10 44.9 2.2 31 30-63 17-47 (108)
331 3s35_X Vascular endothelial gr 98.0 1.3E-05 4.4E-10 43.2 4.7 31 31-61 18-49 (122)
332 4dkd_C Macrophage colony-stimu 98.0 1.6E-06 5.3E-11 52.1 1.0 50 6-59 78-127 (292)
333 2aty_A Complement receptor chi 98.0 4.4E-06 1.5E-10 53.3 3.2 32 33-64 286-318 (376)
334 1iga_A IGA1; immunoglobulin; N 98.0 1.8E-05 6.3E-10 51.2 6.1 32 33-64 362-394 (475)
335 2v5t_A NCAM2, N-CAM 2, neural 98.0 5.6E-06 1.9E-10 46.7 3.1 32 31-63 12-43 (189)
336 3v2a_R Vascular endothelial gr 98.0 2E-06 6.7E-11 57.9 1.2 56 6-64 317-372 (772)
337 2ec8_A MAST/stem cell growth f 97.9 3.6E-05 1.2E-09 50.0 7.1 54 6-62 197-252 (524)
338 3shs_A HOC head outer capsid p 97.9 1.2E-05 4.3E-10 51.3 4.7 34 32-65 13-49 (304)
339 3esu_F Antibody 14B7* light ch 97.9 1.8E-05 6.3E-10 46.9 5.1 29 31-59 141-170 (250)
340 4acp_A IG gamma-1 chain C regi 97.9 1E-05 3.5E-10 49.2 4.0 32 33-64 36-70 (240)
341 1zvo_C Myeloma immunoglobulin 97.9 2.5E-05 8.4E-10 51.5 6.0 56 5-61 119-176 (512)
342 1x9q_A SCFV, 4M5.3 anti-fluore 97.9 2.6E-05 8.7E-10 47.1 5.7 29 31-59 161-190 (268)
343 2ywz_A NEW antigen receptor va 97.9 2.6E-05 9E-10 41.9 5.1 30 30-59 9-39 (111)
344 2o26_X MAST/stem cell growth f 97.9 6.9E-06 2.4E-10 49.5 3.0 50 7-63 82-133 (290)
345 3uzq_A Anti-dengue MAB 4E11; d 97.9 2.2E-05 7.4E-10 46.9 5.1 52 5-59 107-174 (253)
346 1igt_B IGG2A intact antibody - 97.9 3.6E-06 1.2E-10 53.8 1.6 30 34-64 360-390 (444)
347 3o4o_C Interleukin-1 receptor 97.9 3.2E-06 1.1E-10 52.0 1.3 56 6-63 211-271 (339)
348 3oq3_B IFN-alpha/beta binding 97.9 1.8E-05 6.1E-10 48.9 4.6 32 32-64 139-171 (329)
349 3bp6_B Programmed cell death 1 97.9 2.2E-05 7.6E-10 45.1 4.7 28 31-59 12-44 (202)
350 1p6f_A NKP46, natural cytotoxi 97.9 5.8E-05 2E-09 45.7 6.7 40 19-63 7-46 (242)
351 3s97_C Contactin-1; carbonic a 97.9 3.6E-06 1.2E-10 47.8 1.2 35 29-63 16-51 (201)
352 1itb_B Type 1 interleukin-1 re 97.9 1.2E-05 4E-10 48.9 3.5 33 31-63 113-150 (315)
353 1i1r_A GP130, interleukin-6 re 97.9 1.3E-05 4.4E-10 49.2 3.7 33 32-64 15-53 (303)
354 2if7_A SLAM family member 6; N 97.8 1.8E-05 6.3E-10 45.9 4.0 34 30-63 7-40 (193)
355 3rbg_A Cytotoxic and regulator 97.8 3E-05 1E-09 42.2 4.6 31 30-61 10-40 (124)
356 2q20_A VK1 O18/O8 germline lig 97.8 4.1E-05 1.4E-09 40.9 4.8 30 30-60 12-41 (109)
357 2wqr_A IG epsilon chain C regi 97.8 1.6E-05 5.6E-10 48.9 3.6 28 37-64 25-53 (323)
358 3d9a_L Light chain of hyhel10 97.8 3.5E-05 1.2E-09 44.5 4.8 29 30-59 10-38 (213)
359 2w59_A IGY FCU3-4; immunoglobu 97.8 4.1E-06 1.4E-10 50.0 0.8 32 32-63 24-57 (231)
360 1igy_B IGG1 intact antibody MA 97.8 1.2E-05 4.2E-10 51.3 3.1 31 34-64 349-380 (434)
361 2d9c_A Signal-regulatory prote 97.8 2.3E-05 7.9E-10 43.3 3.8 31 30-60 17-47 (136)
362 3c5j_A HLA class II histocompa 97.8 2.5E-05 8.6E-10 46.0 4.1 31 34-64 98-129 (181)
363 1f97_A Junction adhesion molec 97.8 1.9E-05 6.7E-10 45.1 3.4 32 30-62 10-41 (212)
364 1i8k_A Epidermal growth factor 97.8 4.6E-05 1.6E-09 40.6 4.6 29 30-59 10-38 (107)
365 1ypz_E T cell receptor delta, 97.8 3.1E-05 1.1E-09 45.6 4.2 48 5-63 108-159 (207)
366 2vol_A Murine IGG FC; FC, zinc 97.8 1.7E-05 5.7E-10 46.4 3.0 31 33-63 15-48 (207)
367 3nl4_L Antigen binding fragmen 97.8 4.8E-05 1.7E-09 43.9 4.9 29 30-59 10-38 (213)
368 1b6u_A KIR2DL3, P58 killer cel 97.8 5.9E-05 2E-09 46.2 5.5 39 19-62 7-45 (257)
369 4acp_A IG gamma-1 chain C regi 97.8 2.4E-05 8.3E-10 47.5 3.8 31 34-64 143-174 (240)
370 1qfw_M FV, antibody (anti beta 97.8 4.7E-05 1.6E-09 40.6 4.4 29 31-60 11-39 (108)
371 1hzh_H IGG, immunoglobulin hea 97.8 2.1E-05 7.1E-10 50.5 3.5 31 33-63 261-294 (457)
372 2coq_A NEW antigen receptor va 97.8 3.5E-05 1.2E-09 41.2 3.9 30 30-59 9-39 (108)
373 2ny1_B T-cell surface glycopro 97.7 2.3E-05 7.8E-10 44.5 3.3 31 30-61 4-34 (184)
374 1uvq_A HLA class II histocompa 97.7 3.7E-05 1.3E-09 46.0 4.3 31 34-64 101-132 (197)
375 1i1c_A IGG2A, IG gamma-2A chai 97.7 1.4E-05 4.6E-10 48.2 2.3 31 33-63 29-62 (239)
376 2e27_L Anti-ciguatoxin antibod 97.7 6.5E-05 2.2E-09 41.0 4.9 29 30-59 12-40 (119)
377 3r06_A Anti-mouse CD3epsilon a 97.7 5.7E-05 1.9E-09 43.6 4.8 29 30-59 10-38 (213)
378 1jbj_A CD3 epsilon and gamma e 97.7 1.5E-05 5.1E-10 46.0 2.3 30 32-64 10-39 (186)
379 3s6c_A Beta-2-microglobulin, T 97.7 6E-05 2E-09 49.2 5.4 33 33-65 15-48 (392)
380 4fa8_A Secreted protein BARF1; 97.7 2.7E-05 9.2E-10 46.1 3.5 31 31-61 3-35 (203)
381 1lk3_L 9D7 light chain; antige 97.7 5.7E-05 1.9E-09 43.7 4.8 29 30-59 9-37 (210)
382 2fbo_J V1V2;, variable region- 97.7 3.8E-05 1.3E-09 45.1 4.0 31 31-61 12-44 (250)
383 1mqk_L Antibody 7E2 FV fragmen 97.7 7E-05 2.4E-09 40.9 4.8 29 30-59 10-38 (120)
384 3u1s_H FAB PGT145 heavy chain; 97.7 2E-05 6.9E-10 48.0 2.9 54 5-62 153-208 (267)
385 1iak_A MHC class II I-AK; hist 97.7 4.8E-05 1.6E-09 45.5 4.4 31 34-64 102-133 (199)
386 1xau_A B- and T-lymphocyte att 97.7 6E-05 2E-09 42.5 4.4 32 29-60 22-53 (122)
387 3n9g_H FAB fragment of MAB CR4 97.7 3.4E-05 1.2E-09 45.7 3.6 53 5-61 113-167 (230)
388 4frw_A Poliovirus receptor-rel 97.7 4.8E-05 1.6E-09 43.2 4.1 32 29-61 7-41 (218)
389 3ov6_A Beta-2-microglobulin, T 97.7 5.6E-05 1.9E-09 49.5 4.7 33 33-65 18-51 (397)
390 3c5j_B MHC class II antigen; H 97.7 3.1E-05 1E-09 45.5 3.2 30 35-64 109-139 (190)
391 1ntl_A CRRY-IG; immunology, co 97.7 4.1E-05 1.4E-09 51.2 4.1 32 33-64 461-493 (551)
392 3udw_C Poliovirus receptor; PV 97.7 7.2E-05 2.4E-09 39.5 4.3 30 31-60 10-43 (118)
393 1uvq_B HLA class II histocompa 97.7 3.6E-05 1.2E-09 45.6 3.4 29 35-63 107-136 (198)
394 1h5b_A Murine T cell receptor 97.7 0.00011 3.8E-09 39.3 5.1 29 30-60 10-38 (113)
395 4fmk_A Poliovirus receptor-rel 97.7 3.9E-05 1.3E-09 43.8 3.4 30 31-61 11-43 (225)
396 3mj6_A Junctional adhesion mol 97.7 0.00011 3.6E-09 43.7 5.3 30 30-59 127-158 (268)
397 1i3g_L Antibody FV fragment; a 97.6 9.5E-05 3.3E-09 39.6 4.6 30 30-60 13-42 (111)
398 1sq2_N Novel antigen receptor; 97.6 0.00011 3.8E-09 39.6 4.9 30 30-59 9-39 (113)
399 1pew_A JTO2, A lambda-6 type i 97.6 5.7E-05 1.9E-09 40.3 3.6 31 30-60 9-40 (109)
400 1hng_A CD2; T lymphocyte adhes 97.6 3.7E-05 1.3E-09 44.1 2.9 34 30-63 5-39 (176)
401 2id5_A Lingo-1, leucine rich r 97.6 1.3E-05 4.6E-10 51.8 1.1 34 29-63 393-426 (477)
402 1cd1_A CD1, MCD1D.1; immunolog 97.6 6.9E-05 2.3E-09 47.5 4.3 30 35-64 197-227 (315)
403 1za6_B IGG heavy chain; immuno 97.6 2.1E-05 7.3E-10 48.9 1.9 31 34-64 255-286 (344)
404 2bc4_B HLA class II histocompa 97.6 6.2E-05 2.1E-09 45.0 3.9 30 34-63 108-138 (211)
405 1pko_A Myelin oligodendrocyte 97.6 0.0002 6.8E-09 39.4 5.6 31 31-61 16-48 (139)
406 1nbq_A JAM, junctional adhesio 97.6 2.5E-05 8.5E-10 44.5 1.9 31 31-62 14-44 (209)
407 2i24_N NEW antigen receptor PB 97.6 0.00012 4.1E-09 40.3 4.6 31 30-60 9-40 (121)
408 1vca_A VCAM-D1,2, human vascul 97.6 0.00011 3.7E-09 42.9 4.7 27 32-59 12-38 (202)
409 2atp_B T-cell surface glycopro 97.6 0.00017 5.9E-09 38.7 5.1 31 30-60 7-37 (115)
410 3esu_F Antibody 14B7* light ch 97.6 0.00012 4.1E-09 43.3 4.8 29 30-59 13-41 (250)
411 1zox_A CLM-1; IG-superfamily, 97.6 0.00014 4.6E-09 38.8 4.6 31 30-60 10-40 (113)
412 2znx_A SCFV; fluorotryptohpan, 97.6 0.00012 4.3E-09 43.4 4.8 29 30-59 10-38 (242)
413 2c1o_A IGK-C protein; FAB frag 97.6 0.00012 4E-09 43.4 4.7 30 30-59 47-80 (254)
414 3sob_H Antibody heavy chain, l 97.6 6.1E-05 2.1E-09 45.3 3.4 50 5-56 139-190 (256)
415 1q0x_L FAB 9B1, light chain; a 97.6 6.4E-05 2.2E-09 43.4 3.4 30 30-59 9-40 (212)
416 2bc4_A HLA class II histocompa 97.6 6.8E-05 2.3E-09 45.0 3.6 32 33-64 111-143 (211)
417 2q87_A CMRF35-H antigen; all-b 97.6 6.8E-05 2.3E-09 39.9 3.3 31 30-60 5-35 (110)
418 1tvd_A T cell receptor, ES204 97.6 7.8E-05 2.7E-09 40.1 3.5 30 30-59 9-38 (116)
419 3sob_L Antibody light chain; b 97.6 0.00015 5.2E-09 42.2 4.9 29 30-59 33-61 (237)
420 2z35_A T-cell receptor alpha-c 97.5 0.00011 3.8E-09 39.3 4.0 30 29-59 8-37 (112)
421 3i84_A Cervical EMMPRIN; CD147 97.5 0.00014 4.9E-09 39.6 4.4 33 32-64 18-51 (98)
422 1j05_L T84.66 antibody, anti-C 97.5 0.00011 3.8E-09 39.2 4.0 30 30-59 10-42 (111)
423 1eeq_A Kappa-4 immunoglobulin 97.5 9.3E-05 3.2E-09 39.7 3.7 30 30-59 10-44 (114)
424 3uto_A Twitchin; kinase, muscl 97.5 0.00014 4.8E-09 49.2 5.3 33 31-64 492-524 (573)
425 1wio_A CD4, T-cell surface gly 97.5 4.9E-05 1.7E-09 47.3 2.9 31 30-61 3-33 (363)
426 2zg1_A Sialic acid-binding IG- 97.5 0.00013 4.5E-09 42.0 4.4 32 30-61 9-46 (214)
427 3kgr_A LAIR-1, hlair1, leukocy 97.5 0.00033 1.1E-08 37.5 5.8 38 19-61 9-46 (106)
428 3auv_A SC-DSFV derived from th 97.5 0.00013 4.6E-09 44.1 4.6 30 30-60 21-50 (276)
429 3khq_A B-cell antigen receptor 97.5 0.00016 5.6E-09 40.3 4.5 28 29-59 25-52 (133)
430 3moq_A NEW antigen receptor va 97.5 0.0003 1E-08 39.1 5.6 30 30-59 9-39 (126)
431 3mjg_X Beta-type platelet-deri 97.5 5.8E-05 2E-09 45.3 2.7 52 7-60 80-132 (289)
432 2or8_A Hepatitis A virus cellu 97.5 9.7E-05 3.3E-09 39.3 3.4 31 30-60 6-36 (116)
433 1dlf_L Anti-dansyl immunoglobu 97.5 0.00021 7.1E-09 38.3 4.7 30 30-59 10-43 (113)
434 2xzc_L FAB A.17 light chain; i 97.5 9.8E-05 3.4E-09 42.8 3.5 31 30-60 9-40 (216)
435 3f8u_B Tapasin; endoplasmic re 97.5 0.00012 4.1E-09 48.3 4.2 49 8-60 283-335 (401)
436 2ptt_A CD48 antigen; CD244, CD 97.5 0.0001 3.4E-09 39.2 3.2 30 30-59 12-41 (110)
437 1c1e_H Catalytic antibody 1E9 97.5 0.00015 5.1E-09 42.1 4.2 29 31-59 10-39 (219)
438 3r4d_A CEA-related cell adhesi 97.5 0.00038 1.3E-08 39.7 5.9 29 32-61 10-38 (208)
439 3nwm_A Peptide/beta-2microglob 97.5 0.00013 4.5E-09 48.5 4.4 32 34-65 42-74 (443)
440 3iu4_H CHP3 FAB heavy chain; a 97.5 0.00015 5.1E-09 44.2 4.3 50 5-56 112-163 (263)
441 3c6l_A TCR 2W20 alpha chain; T 96.6 1.7E-05 5.6E-10 47.0 0.0 52 4-62 97-150 (185)
442 1fo0_A Protein (BM3.3 T cell r 97.5 0.00017 5.9E-09 38.8 4.1 31 29-59 8-38 (116)
443 3v2a_R Vascular endothelial gr 97.5 0.00048 1.6E-08 46.3 7.0 33 31-63 234-267 (772)
444 1moe_A Anti-CEA MAB T84.66; an 97.5 0.00015 5.2E-09 42.5 4.1 29 30-59 10-42 (240)
445 1onq_A T-cell surface glycopro 97.5 0.00011 3.8E-09 46.0 3.6 31 35-65 198-229 (283)
446 1nfd_E H57 FAB; complex (immun 97.5 6.3E-05 2.2E-09 43.4 2.4 29 30-59 8-36 (212)
447 3usa_D HLA class II histocompa 97.5 0.00024 8.1E-09 42.6 4.9 31 34-64 105-136 (189)
448 1n26_A IL-6 receptor alpha cha 97.5 6.9E-05 2.3E-09 46.6 2.6 33 30-62 15-47 (325)
449 3lqz_A HLA class II histocompa 97.4 0.00015 5E-09 42.8 3.9 30 35-64 99-129 (181)
450 1hxm_A Gamma-delta T-cell rece 97.4 0.00048 1.6E-08 41.4 6.2 48 5-63 109-160 (229)
451 3q0h_A T cell immunoreceptor w 97.4 0.00019 6.4E-09 39.0 4.0 32 31-62 13-45 (117)
452 2p24_A H-2 class II histocompa 97.4 0.00014 4.7E-09 44.5 3.8 31 34-64 132-163 (236)
453 3usa_C HLA class II histocompa 97.4 0.00028 9.5E-09 42.0 5.0 32 33-64 97-129 (181)
454 3s96_B 3B5H10 FAB light chain; 97.4 0.00018 6.1E-09 41.5 4.1 29 30-58 9-37 (218)
455 2p1y_A Bispecific alpha/beta T 97.4 0.00022 7.6E-09 41.7 4.6 28 30-59 9-36 (238)
456 2j6e_L IGM, FAB light chain; a 97.4 7.5E-05 2.6E-09 43.6 2.5 30 30-59 28-58 (234)
457 2hp4_A T-cell surface glycopro 97.4 0.00015 5.1E-09 39.2 3.5 29 31-59 10-38 (114)
458 3bik_B Programmed cell death p 97.4 0.00054 1.8E-08 38.1 5.9 31 29-59 17-47 (134)
459 1svz_A Immunoglobulin;, single 97.4 0.00025 8.5E-09 41.9 4.7 29 30-59 10-43 (247)
460 2h26_A CD1B antigen, T-cell su 97.4 0.00012 4E-09 45.9 3.4 30 35-64 198-228 (286)
461 1xt5_A Variable region-contain 97.4 0.00034 1.1E-08 38.0 4.9 30 31-60 14-45 (135)
462 3bkj_L WO2 IGG2A FAB fragment 97.4 0.00027 9.1E-09 42.1 4.8 31 29-60 42-77 (252)
463 3bp6_A Programmed cell death p 97.4 0.00047 1.6E-08 37.2 5.4 30 30-59 8-37 (117)
464 3fku_X Neutralizing antibody F 97.4 0.00044 1.5E-08 42.1 5.8 52 5-59 114-178 (280)
465 3ux9_B SCFV antibody; five hel 97.4 0.0002 6.8E-09 42.6 4.2 29 31-59 12-41 (256)
466 2pet_A Lutheran blood group gl 97.4 9.9E-05 3.4E-09 42.8 2.7 30 30-60 9-39 (231)
467 3mj8_L Stimulatory hamster ant 97.4 0.00028 9.7E-09 40.6 4.6 28 30-58 9-36 (213)
468 3bj9_1 Immunoglobulin IOTA cha 97.4 0.0003 1E-08 37.7 4.4 29 31-59 8-38 (116)
469 2xot_A Amphoterin-induced prot 97.4 5.4E-05 1.8E-09 47.9 1.5 31 30-62 255-285 (361)
470 4fmk_A Poliovirus receptor-rel 97.4 0.00024 8.3E-09 40.4 4.1 49 9-62 114-162 (225)
471 1iao_B MHC class II I-AD; MHC 97.4 0.00018 6.3E-09 43.5 3.7 29 35-63 135-164 (222)
472 1z9m_A GAPA225; nectin-like, I 97.4 0.00024 8.1E-09 39.5 3.9 29 29-58 46-74 (145)
473 2qrt_A H-2KB, H-2 class I hist 97.4 0.0002 6.9E-09 47.2 4.1 32 33-64 38-70 (422)
474 2x1w_L Vascular endothelial gr 97.4 0.00015 5E-09 42.3 3.1 33 29-63 15-52 (213)
475 1fo0_B Protein (BM3.3 T cell r 97.3 0.00048 1.6E-08 36.9 4.9 29 30-59 10-38 (112)
476 3sbw_C Programmed cell death 1 97.3 0.00068 2.3E-08 39.0 5.9 30 31-61 11-45 (222)
477 2ifg_A High affinity nerve gro 97.3 9.1E-05 3.1E-09 46.2 2.2 31 31-62 168-198 (347)
478 1dr9_A B7-1 (CD80), T lymphocy 97.3 0.00011 3.8E-09 42.1 2.5 34 30-63 3-39 (201)
479 2otu_A FV light chain variable 97.3 0.00029 9.9E-09 37.9 3.9 29 31-59 11-39 (115)
480 1qok_A MFE-23 recombinant anti 97.3 0.00026 9E-09 43.0 4.0 31 30-60 35-66 (282)
481 2yc1_B Single chain antibody f 97.3 0.00046 1.6E-08 39.3 4.8 30 30-60 25-54 (146)
482 3noi_A Natural cytotoxicity tr 97.3 0.00041 1.4E-08 37.5 4.4 31 30-60 16-49 (120)
483 4dzb_B Vbeta2 (MAIT T cell rec 97.3 0.00047 1.6E-08 40.6 4.9 28 30-58 10-37 (246)
484 1u3h_A T-cell receptor alpha-c 96.4 3.6E-05 1.2E-09 41.3 0.0 29 31-60 9-37 (110)
485 4aen_A HLA class II histocompa 97.3 0.00027 9.1E-09 42.8 3.8 30 35-64 114-144 (207)
486 4f7e_A CD1D antigen, D polypep 97.3 0.00023 8E-09 44.6 3.6 29 36-64 199-228 (283)
487 4ffy_L DENV1-E111 single chain 97.3 0.00036 1.2E-08 38.2 4.0 30 30-59 10-42 (126)
488 3tf7_C 42F3 MUT7 SCFV (42F3 al 97.3 0.00033 1.1E-08 41.9 4.1 29 30-59 12-40 (256)
489 1ccz_A Protein (CD58); LFA-3, 97.3 0.00023 7.9E-09 40.7 3.3 30 31-62 5-34 (171)
490 1nqb_A Single-chain antibody f 97.3 0.00024 8.1E-09 42.7 3.5 29 31-59 10-39 (256)
491 1hxm_B Gamma-delta T-cell rece 97.3 0.00053 1.8E-08 40.7 4.9 30 30-59 10-40 (242)
492 3huj_A R3G1, T-cell surface gl 97.3 0.00033 1.1E-08 43.9 4.1 29 36-64 200-229 (284)
493 1x9q_A SCFV, 4M5.3 anti-fluore 97.2 0.00034 1.2E-08 42.1 3.9 30 30-59 24-57 (268)
494 3tv3_L PGT128 light chain, IG 97.2 0.00037 1.2E-08 40.1 3.9 27 30-59 9-35 (211)
495 1nez_G T-cell surface glycopro 97.2 0.0006 2E-08 37.8 4.6 29 30-59 13-41 (128)
496 3p73_A MHC RFP-Y class I alpha 97.2 0.00031 1E-08 43.7 3.7 30 35-64 193-223 (275)
497 3mlr_H Human monoclonal anti-H 97.2 0.00032 1.1E-08 41.4 3.6 50 5-56 114-165 (226)
498 2dru_A Chimera of CD48 antigen 97.2 0.00022 7.4E-09 41.2 2.8 30 30-59 8-37 (180)
499 2qhl_A Novel immune-type recep 97.2 0.00017 5.9E-09 38.6 2.1 30 30-59 8-37 (111)
500 3rrq_A Protein PD-1, programme 97.2 0.00087 3E-08 36.9 5.0 30 30-59 10-39 (129)
No 1
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.29 E-value=3.8e-12 Score=76.31 Aligned_cols=56 Identities=32% Similarity=0.501 Sum_probs=48.1
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCce--EEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAK--IVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~--i~W~~~~~~l~ 64 (65)
....++|+|+.+|.++.|...+. .+.+|+.++|+|++.++.|+++ |+|||+++++.
T Consensus 74 ~~~~~~l~V~~~P~~v~i~~~~~----~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~ 131 (185)
T 1iam_A 74 STAKTFLTVYWTPERVELAPLPS----WQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELK 131 (185)
T ss_dssp EEEECEEEEEBCCSEEEECCCCS----EECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEE
T ss_pred eEEEEEEEEeCCCCCCEEccCCc----cccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcc
Confidence 44568999999999988876543 6999999999999999999975 89999999874
No 2
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.26 E-value=6.5e-12 Score=75.91 Aligned_cols=56 Identities=29% Similarity=0.446 Sum_probs=48.4
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCce--EEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAK--IVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~--i~W~~~~~~l~ 64 (65)
....++|+|+.+|+++.|...+. .+.+|+.++|+|++.+++|+++ |+||||+++|.
T Consensus 77 ~~~~v~l~Vy~~P~~v~i~~~~~----~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~ 134 (196)
T 3bn3_B 77 LQARGLIRTFQRPDRVELMPLPP----WQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELI 134 (196)
T ss_dssp EEEECEEEEEBCCCCCEECCCCS----SEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEE
T ss_pred eEEEEEEEEecCCCcCEEccCCc----cccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEee
Confidence 34568999999999999876543 4899999999999999999988 79999999875
No 3
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.14 E-value=8.4e-11 Score=71.04 Aligned_cols=55 Identities=22% Similarity=0.512 Sum_probs=48.7
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCce--EEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAK--IVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~--i~W~~~~~~l~ 64 (65)
...++|+|+.+|+++.|...+. .+.+|+.++|+|++.++.|.+. |.|||++++|.
T Consensus 77 ~~~~~itVy~~P~~v~i~~~p~----~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~ 133 (192)
T 1zxq_A 77 SMNSNVSVYQPPRQVILTLQPT----LVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLH 133 (192)
T ss_dssp EEEEEEEECBCCCCCEEEEESS----EECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEE
T ss_pred EEEEEEEEEeCCCCceEccCCc----cccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEee
Confidence 3568999999999999986554 7999999999999999999998 79999999874
No 4
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.13 E-value=1.8e-11 Score=77.26 Aligned_cols=56 Identities=32% Similarity=0.488 Sum_probs=47.5
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc--eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA--KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~--~i~W~~~~~~l~ 64 (65)
+...++|+|+.+|+++.|...+. .+.+|+.++|+|.+.+++|++ .|+||||++++.
T Consensus 74 ~~~~v~l~V~~~P~~v~I~~~~~----~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~ 131 (291)
T 1mq8_A 74 STAKTFLTVYWTPERVELAPLPS----WQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELK 131 (291)
T ss_dssp EEEECEEEECBCCSCCCBCCCCS----BCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEE
T ss_pred EEEEEEEEEecCCCCCEEecCCc----cccCCCCEEEEEEecCccCCCCcEEEEEECCEEee
Confidence 44567999999999998876543 589999999999999999988 489999998764
No 5
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.08 E-value=2.3e-10 Score=67.58 Aligned_cols=56 Identities=20% Similarity=0.329 Sum_probs=45.4
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc--eEEEEECCEEcc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA--KIVWYRGNTELK 64 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~--~i~W~~~~~~l~ 64 (65)
..+..+.|+|..+|..+.+... . .+.+|+.++|+|.+.++.|++ .|+|||||+++.
T Consensus 79 ~~~~~~~l~V~~~p~~~~~~~~-~----~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~ 136 (202)
T 1vca_A 79 KLEKGIQVEIYSFPKDPEIHLS-G----PLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMK 136 (202)
T ss_dssp EEEEEEEEEEEBCCSCCEEEES-S----CEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEE
T ss_pred eEeeEEEEEEEeCCCCCEeCCc-e----EEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECc
Confidence 3455789999999988887653 2 589999999999998876764 799999998763
No 6
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.02 E-value=5e-10 Score=65.65 Aligned_cols=58 Identities=29% Similarity=0.566 Sum_probs=46.7
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcE-EEEEEecCCCCCceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEI-TLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~-~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
....+.|+|..+|..+.+...+. .+.+.+|+.+ +|.|.+..++|++.|+|||+|+++.
T Consensus 104 ~~~~~~l~V~~~p~~~~~~~~~~--~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~ 162 (231)
T 2pet_A 104 AEATARLNVFAKPEATEVSPNKG--TLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLE 162 (231)
T ss_dssp EEEEEEEEEEBCCCCCEEEECCS--SCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECC
T ss_pred eEEEEEEEEEecCCCcEEecCCc--ceeecCCCceEEEEEEeECcccCCEEEEEECCccCc
Confidence 34567899999999888865442 2346789988 9999997778999999999999874
No 7
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.00 E-value=9.1e-10 Score=66.96 Aligned_cols=54 Identities=15% Similarity=0.347 Sum_probs=44.6
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc----eEEEEECCEEcc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA----KIVWYRGNTELK 64 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~----~i~W~~~~~~l~ 64 (65)
+....++|+|+.+|..+.+.. . .+.+|+.+ |+|.+.+..|++ .|+|||||++|.
T Consensus 84 ~~~~~~~ltV~~~P~~~~i~~--~----~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~ 141 (210)
T 1gsm_A 84 TFQHTVQLLVYAFPNQLTVSP--A----ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELE 141 (210)
T ss_dssp EEEEEEEEEEEBCCSEEEEES--S----SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECT
T ss_pred ceEEEEEEEEEecCCCcEEcc--c----eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcc
Confidence 445678999999999877763 2 57888889 999998877865 899999999985
No 8
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.98 E-value=2e-09 Score=66.44 Aligned_cols=56 Identities=21% Similarity=0.431 Sum_probs=45.1
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
++..+.|+|..+|..|.+.... ..+.+|+.++|.|.+.+..|++ .|+|||||+++.
T Consensus 105 ~~~~~~l~V~~~p~~p~i~~~~----~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~ 161 (327)
T 2wng_A 105 SGAGTELSVRAKPSAPVVSGPA----ARATPQHTVSFTCESHGFSPRDITLKWFKNGNELS 161 (327)
T ss_dssp ECCCEEEEEEBCCCCCEEECCS----SCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred ecCcEEEEEEecCCCceeeccc----cccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcc
Confidence 4567899999999988886322 2678999999999998765544 999999999874
No 9
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.95 E-value=3.8e-09 Score=61.75 Aligned_cols=52 Identities=19% Similarity=0.325 Sum_probs=40.1
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCC-cEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQ-EITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~-~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.|+|+.+|..|.+..... ....|. .++|+|.+.++.|.+.|+|+|+|+.+
T Consensus 99 ~~~L~V~~~~~~p~i~~~~~----~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l 151 (193)
T 2if7_A 99 SYTLRILRQLRNIQVTNHSQ----LFQNMTCELHLTCSVEDADDNVSFRWEALGNTL 151 (193)
T ss_dssp EEEEEEECCCEEEEEEECCC-------CSSEEEEEEEEEESCCTTCEEEEEETTEEE
T ss_pred EEEEEEEccCCCCeEecCce----eecCCCceEEEEEEEecCCCceEEEEEeCCEEc
Confidence 57899999888887765432 234565 89999999887778999999999865
No 10
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.93 E-value=6e-09 Score=60.06 Aligned_cols=53 Identities=19% Similarity=0.377 Sum_probs=43.5
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCE-Ec
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNT-EL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~-~l 63 (65)
...+.|+|.++|..+.+... ..+.+|+.++|.|.+..++|.+.|+|||+++ .+
T Consensus 94 ~~~~~l~V~~~p~~~~~~~~-----~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l 147 (212)
T 1f97_A 94 EVSIHLTVLVPPSKPTISVP-----SSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISML 147 (212)
T ss_dssp EEEEEEEEEBCCCCCEEECC-----SEEETTSCEEEEEECSCCBSCCEEEEEETTEESB
T ss_pred EEEEEEEEEcCCCCcccCCc-----cccCCCCeEEEEEEcccCcCCCEEEEEeCCcccc
Confidence 34678999999988776432 2688999999999965789999999999998 55
No 11
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.93 E-value=2.5e-09 Score=61.96 Aligned_cols=52 Identities=19% Similarity=0.273 Sum_probs=40.5
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.|.|..++..|.+... ....|+.++|.|.+.+++|.|.|+|||||+.+.
T Consensus 98 ~~~~l~V~~~~~~p~~~~~------~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~ 149 (201)
T 1dr9_A 98 AEVTLSVKADFPTPSISDF------EIPTSNIRRIICSTSGGFPEPHLSWLENGEELN 149 (201)
T ss_dssp EEEEEEEECCCCCCEEEEE------ECSSTTEEEEEEEEEEESSCEEEEEEESSCEEC
T ss_pred cEEEEEEcCCCCCCceEec------cCCCCCeEEEEEecCCccCCCEEEEEECCEECc
Confidence 3577888887666666432 235688999999997788999999999998764
No 12
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.91 E-value=1.9e-09 Score=62.79 Aligned_cols=59 Identities=15% Similarity=0.331 Sum_probs=45.6
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.++..+.|.|..++..|.+...... ..+.+|+.++|.|.+.++.|++.|+|||||+.+.
T Consensus 99 ~~~~~~~l~V~~~~~~p~v~~~~~~--~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~ 157 (213)
T 3nl4_L 99 SFGGGTEVGVKGDPVAPTVLIFPPS--ADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQT 157 (213)
T ss_dssp EECCCEEEEEECCCBCCEEEEECCC--HHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECC
T ss_pred EeCCCeEEEEeCCCcCCeEEEeCCc--hhhccCCcEeEEEEEecccCCcEEEEEeCCccCC
Confidence 4567789999877667776543321 1356799999999998878999999999998864
No 13
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.86 E-value=1e-08 Score=59.63 Aligned_cols=51 Identities=14% Similarity=0.180 Sum_probs=41.1
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCC---CCCceEEEEECCEE
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNA---KPAAKIVWYRGNTE 62 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~---~P~~~i~W~~~~~~ 62 (65)
..+.|+|..+|..|.|... . .+.+|+.++|.|.+.++ .|++.|+|+|++..
T Consensus 114 ~~~~l~V~~~~~~p~i~~~-~----~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~ 167 (214)
T 2zg1_A 114 NKLNLEVTALIEKPDIHFL-E----PLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALS 167 (214)
T ss_dssp SCEEEEEECCCCCCEEC---C----CCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTS
T ss_pred CceEEEEecCCCCCceecC-c----cccCCCeEEEEEEeccCCCCCCCceEEEeCCCCc
Confidence 5789999998888887542 2 36899999999999765 58999999999754
No 14
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.85 E-value=5e-09 Score=56.24 Aligned_cols=35 Identities=26% Similarity=0.646 Sum_probs=30.9
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+.+|+.++|.|.+. |.|.|.|+|||||+++.
T Consensus 13 ~~~~v~~G~~~~l~C~~~-g~P~p~v~W~k~g~~i~ 47 (100)
T 3knb_A 13 SDISIDEGKVLTVACAFT-GEPTPEVTWSCGGRKIH 47 (100)
T ss_dssp SEEEEETTSEEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred CcEEEeCCCeEEEEEEEE-EecCCEEEEEECceEee
Confidence 457889999999999996 58999999999999874
No 15
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=1.8e-09 Score=58.73 Aligned_cols=53 Identities=13% Similarity=0.308 Sum_probs=40.4
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..++|+|..+|. .+...+ ..+.+.+|+.++|.|.+. +.|.+.|+|||||+.+.
T Consensus 3 s~a~l~V~~~p~--~~~~~~--~~~~v~~G~~v~l~C~~~-g~p~p~v~W~k~g~~l~ 55 (115)
T 2cr6_A 3 SGSSGLVQGRRV--HIIEDL--EDVDVQEGSSATFRCRIS-PANYEPVHWFLDKTPLH 55 (115)
T ss_dssp CCCCCCCCSSCC--EEEECC--CEEEEETTSCEECCCEEE-STTCCSCEEEESSCEEC
T ss_pred ccEEEEEcCCCC--eEeccC--ccEEEeCCCcEEEEEEEc-CCCCCccEEEECCEECC
Confidence 456788887763 343222 356899999999999996 57889999999998763
No 16
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=98.82 E-value=2.1e-08 Score=58.16 Aligned_cols=55 Identities=13% Similarity=0.138 Sum_probs=40.1
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+..+.|.|..++..|.+...+. ..+.+|+.++|.|.+.+. ++.++|||+|..+
T Consensus 86 ~~s~~~~l~V~~~~~~p~i~~~~~---~~v~~G~~v~L~C~~~~~--~~~v~W~k~g~~~ 140 (198)
T 1ugn_A 86 ESSDPLELVVTGAYIKPTLSAQPS---PVVNSGGNVTLQCDSQVA--FDGFILCKEGEDE 140 (198)
T ss_dssp CCCCCEEEEEECSSCCCEEEEESC---SEEETTCCEEEEEECSSC--CSEEEEEEC----
T ss_pred cCCccEEEEEcccccCCccccCCc---cccCCCCcEEEEEecCCC--CcEEEEEECCCcc
Confidence 345678999998666677765442 368899999999999764 6799999999865
No 17
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.82 E-value=1.4e-08 Score=58.89 Aligned_cols=54 Identities=11% Similarity=0.100 Sum_probs=32.4
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+..+.|.|..++..|.+...+. ..+.+|+.++|.|.+.+ .| +.++|||+|+.+
T Consensus 86 ~s~~~~l~V~~~~~~p~i~~~~~---~~v~~G~~v~L~C~~~~-~p-~~~~W~k~g~~~ 139 (196)
T 2d3v_A 86 PSDPLELVVTGFYNKPTLSALPS---PVVTSGENVTLQCGSRL-RF-DRFILTEEGDHK 139 (196)
T ss_dssp CCCCEEEEEECSSCCCEEEC--------------CEEEEEESS-CC-SEEEEEEC---C
T ss_pred cCccEEEEecCCCCCCeEEccCC---ccccCCCcEEEEEEcCC-CC-CEEEEEccCCcc
Confidence 35678999998766777765432 36889999999999965 56 899999999875
No 18
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.81 E-value=2.3e-09 Score=61.69 Aligned_cols=54 Identities=17% Similarity=0.423 Sum_probs=42.9
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.|+|.++|..+.+.. + ..+.+|+.++|.|.+..++|++.++|||+|+.+.
T Consensus 97 ~~~~~l~V~~~p~~~~~~~-~----~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~ 150 (209)
T 1nbq_A 97 EVKVKLIVLVPPSKPTVNI-P----SSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMP 150 (209)
T ss_dssp CCEEECCEEBCCCCCCCCC-B----SEEETTSCEEECCCCCSCBSCCEEEEEETTCCCC
T ss_pred eEEEEEEEecCCcCCCccc-c----cceecCCEEEEEEeCCCCCCCceeEEEECCeeCC
Confidence 4567899999997765432 1 2588999999999986789999999999998653
No 19
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.80 E-value=5.6e-08 Score=55.48 Aligned_cols=53 Identities=13% Similarity=0.204 Sum_probs=39.5
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+..++|+|..+| +.+.. +. ..+.+|+.++|.|.+.++.|++.++|||+|+.+
T Consensus 78 ~s~~~~l~V~~~~--~~~~~-~~---~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~ 130 (175)
T 1fnl_A 78 LSDPVQLEVHIGW--LLLQA-PR---WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDR 130 (175)
T ss_dssp CCCCEEEEEECSS--EEEEC-SC---SEEETTCCEEEEEEECTTCCCEEEEEEETTEEE
T ss_pred ccccEEEEEeCCC--ceeeC-CC---ceecCCCCEEEEEEcCCCCCceEEEEEECCeEc
Confidence 3567889998544 23332 22 368899999999999776666799999999876
No 20
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.80 E-value=2.5e-08 Score=58.15 Aligned_cols=55 Identities=9% Similarity=0.095 Sum_probs=42.8
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+..+.|.|..++..|.+...+. ..+.+|+.++|.|.+.+ |++.+.|||+|+.+
T Consensus 93 ~~s~~~~l~V~~~~~~p~i~~~p~---~~v~~G~~v~L~C~~~~--~~~~~~w~k~g~~~ 147 (201)
T 1nkr_A 93 APSDPLDIVIIGLYEKPSLSAQPG---PTVLAGENVTLSCSSRS--SYDMYHLSREGEAH 147 (201)
T ss_dssp CCCCCEEEEEECSSCCCEEEEESC---SEECTTCEEEEEEEESS--CCSEEEEEETTCSS
T ss_pred CCCCCEEEEeeccCCCCceecCCC---CccCCCCeEEEEEeCCC--CCceEEEEECCccc
Confidence 345678999998766777765443 26899999999999864 57899999998754
No 21
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.79 E-value=3.5e-08 Score=58.17 Aligned_cols=54 Identities=13% Similarity=0.171 Sum_probs=42.0
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+..+.|+|..+|. +...+. ..+.+|+.++|.|.+.++.|.+.|+|||||+.+
T Consensus 77 ~~s~~~~l~V~~~p~---~~~~~~---~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~ 130 (204)
T 3sgj_C 77 TLSDPVQLEVHIGWL---LLQAPR---WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGR 130 (204)
T ss_dssp BCCCCEEEEEECSSE---EEECSC---SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEE
T ss_pred cccccEEEEEecCce---EecCCc---eeEeCCCcEEEEEEecCCCCCceEEEEECCcEe
Confidence 345678999998763 332232 367899999999999777788999999999875
No 22
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.77 E-value=1.9e-08 Score=57.89 Aligned_cols=50 Identities=14% Similarity=0.207 Sum_probs=40.7
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
...+.|+|..+|..+.+.... .+.+|+.++|.|.+..+.|.+.|+|||++
T Consensus 111 ~~~~~l~V~~~p~~~~~~~~~-----~~~~g~~v~l~C~~~~g~p~~~v~W~~~~ 160 (214)
T 3jz7_A 111 NKKFLLTVLVKPSGTRCFVDG-----SEEIGNDFKLKCEPKEGSLPLQFEWQKLS 160 (214)
T ss_dssp EEEEEEEEECCCBSCEEEEES-----CCBTTCCEEEEEECSBCCSSCEEEEEECS
T ss_pred ccEEEEEEEcCCCCceeeeec-----ceecCCcEEEEecCCCCCCCCEEEEEECC
Confidence 456889999999887664332 37899999999999777899999999953
No 23
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=98.77 E-value=1.2e-08 Score=55.51 Aligned_cols=34 Identities=26% Similarity=0.668 Sum_probs=30.2
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. |+|.+.|+|||||++|.
T Consensus 22 ~~~v~~G~~~~l~C~~~-G~P~p~v~W~k~g~~l~ 55 (107)
T 3knb_B 22 PVRVVSGAEAELKCVVL-GEPPPVVVWEKGGQQLA 55 (107)
T ss_dssp CEEEETTSCEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred cEEEeCCCcEEEEEEEE-EecCCEEEEEECccccc
Confidence 36789999999999995 58999999999999874
No 24
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.77 E-value=5.2e-08 Score=55.55 Aligned_cols=54 Identities=19% Similarity=0.186 Sum_probs=40.4
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+..+.|+|..++. .+.... ..+.+|+.++|.|.+.++.|.+.++|||||+.+.
T Consensus 75 ~s~~~~l~V~~~~~--~~~~~~----~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~ 128 (176)
T 1f2q_A 75 ESEPVYLEVFSDWL--LLQASA----EVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALK 128 (176)
T ss_dssp CCCCEEEEEECSSE--EEEESC----SEEETTSCEEEEEEEGGGCCEEEEEEEETTEECC
T ss_pred ccccEEEEEeCcce--eecCCc----ceeeCCCCEEEEEEecCCCCceEEEEEECCEEEe
Confidence 35678888984432 222222 2678999999999997778889999999998863
No 25
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.76 E-value=4.8e-08 Score=55.01 Aligned_cols=53 Identities=19% Similarity=0.354 Sum_probs=40.8
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+..+.|+|..+| .+...+. ..+.+|+.++|.|.+.++.|.+.++|||+|+.+
T Consensus 75 ~s~~~~l~v~~~~---~~~~~~~---~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~ 127 (170)
T 3ry4_A 75 LSDPVHLTVLFEW---LVLQTPH---LEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQ 127 (170)
T ss_dssp CCCCEEEEEECCS---EEEECSC---SEECTTCCEEEEEEEGGGCCEEEEEEEETTEEE
T ss_pred ceEeEEEEEECCc---eEecCCC---ceeecCCeEEEEEECCCCCCCceEEEEECCeEc
Confidence 4567889998866 2222222 367899999999999777788999999999875
No 26
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.76 E-value=1.1e-08 Score=59.62 Aligned_cols=59 Identities=20% Similarity=0.442 Sum_probs=41.7
Q ss_pred ccCCCEEEEEEcCC-CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 4 RYGPRTRLYQFAPP-SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 4 ~~~~~~~L~V~~pP-~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
.++..+.|.|...| ..|.+...+.. ..+.+|+.++|.|.+.+..|+ +.|+|||||+++.
T Consensus 98 ~~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 158 (213)
T 3mj8_L 98 VFGSGTKVTVLGQPNAAPSVTLFPPS--SEELKTNQATLVCMINGFYPADVAVTWEADGTPIT 158 (213)
T ss_dssp EEBCCEEEEEECSCCBCCEEEEECCC--HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred EEcCceEEEEeCCCCCCCeEEccCCC--cccccCCcEEEEEEeeceeCCCeEEEEEcCCcccC
Confidence 45677899999544 34455433321 134489999999999876666 5999999999863
No 27
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.76 E-value=2e-08 Score=52.29 Aligned_cols=33 Identities=15% Similarity=0.529 Sum_probs=28.6
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+|+.++|.|.+. ++|.+.+.|||+|+.+.
T Consensus 13 ~~v~~G~~~~l~C~~~-g~p~p~i~W~~~~~~~~ 45 (91)
T 3bfo_A 13 QKLMPGSTLVLQCVAV-GSPIPHYQWFKNELPLT 45 (91)
T ss_dssp EEECTTSCEEEECEEE-CSSCCEEEEEETTEECT
T ss_pred cEecCCCcEEEEEEec-cCCCCEEEEEcCCeeCC
Confidence 3678999999999985 57899999999998864
No 28
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.75 E-value=6.1e-09 Score=54.71 Aligned_cols=33 Identities=15% Similarity=0.499 Sum_probs=28.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. + |.+.|+|||||++|.
T Consensus 5 ~v~~~~G~~v~l~C~vs-~-p~p~v~W~k~g~~l~ 37 (84)
T 2lu7_A 5 RVRSTPGGDLELVVHLS-G-PGGPVRWYKDGERLA 37 (84)
T ss_dssp CEEECTTSCEEEECCCS-C-CSTTCEEEETTEECC
T ss_pred EEEEecCCCEEEEEEEC-C-CCcEEEEEECCEEcc
Confidence 46789999999999983 3 888999999999874
No 29
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.75 E-value=3.2e-08 Score=65.80 Aligned_cols=53 Identities=19% Similarity=0.330 Sum_probs=44.3
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
+..+.|+|.++|..+.+.... ..+.+|+.++|.|.+ .++|++.|+|||||+.+
T Consensus 192 s~~~~l~V~~~p~~~~~~~~~----~~~~~G~~~~l~C~~-~g~p~~~i~W~~~g~~i 244 (642)
T 1e07_A 192 SDSVILNVLYGPDAPTISPLN----TSYRSGENLNLSCHA-ASNPPAQYSWFVNGTFQ 244 (642)
T ss_pred cceEEEEEEeCCCCcEEecCC----cccccCCEEEEEEEc-CCCCCcEEEEEECCeEc
Confidence 456899999988887775332 368899999999999 67899999999999876
No 30
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.74 E-value=7.8e-09 Score=60.81 Aligned_cols=58 Identities=21% Similarity=0.315 Sum_probs=43.7
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~~~~l~ 64 (65)
++..+.|+|...+..|.+...... ....+|+.++|+|.+.++.| .+.|+|||||+.+.
T Consensus 121 ~~~~~~l~V~~~~~~p~v~~~~~~--~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~ 179 (237)
T 3sob_L 121 FGQGTKVEIKRTVAAPSVFIFPPS--DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS 179 (237)
T ss_dssp ECCCEEEEEECCCBCCEEEEECCC--HHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred EcCcEEEEEecCCCCCceEEeCCC--hhhccCCceEEEEEEcccCCCceEEEEEECCCCCC
Confidence 466789999887777777543321 12446888999999988777 79999999998764
No 31
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.74 E-value=3.2e-08 Score=57.67 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=40.1
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEEC-CEEc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRG-NTEL 63 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~-~~~l 63 (65)
..++|.|..+|..+.+... ..+.+|+.++|.|.+.+ +|.+.|+|+++ ++.+
T Consensus 107 ~~~~l~V~~~~~~~~~~~~-----~~~~~g~~v~L~C~~~g-~P~p~i~W~~~~g~~~ 158 (222)
T 3sbw_C 107 KRITVKVNAPYNKINQRIL-----VVDPVTSEHELTCQAEG-YPKAEVIWTSSDHQVL 158 (222)
T ss_dssp EEEEEEEEBCCCCCEEEEE-----EEETTTTEEEEEEEEEE-BSCCEEEEEETTCCEE
T ss_pred eEEEEEEECCCCCCCceee-----eeecCCCcEEEEEEecC-CCCCeEEEEECCCcee
Confidence 3578999998887765431 15678999999999966 89999999998 5543
No 32
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.74 E-value=1.1e-08 Score=59.55 Aligned_cols=59 Identities=24% Similarity=0.474 Sum_probs=41.9
Q ss_pred ccCCCEEEEEEcCC-CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 4 RYGPRTRLYQFAPP-SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 4 ~~~~~~~L~V~~pP-~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
.++..+.|+|...| ..|.+..... ......|+.++|.|.+.++.|++ .|+|||||+++.
T Consensus 105 ~~~~~~~l~V~~~~~~~P~~~~~~~--~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~ 165 (218)
T 3s96_B 105 VFGGGTKVTVLGQPKSTPTLTVFPP--SSEELKENKATLVCLISNFSPSGVTVAWKANGTPIT 165 (218)
T ss_dssp EECCCEEEEEESCCCBCCEEEEECC--CHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC-
T ss_pred EEcCcEEEEEecCCCCCceEEeeCC--CcccccCCcEEEEEEECcccCCCeEEEEEECCEECc
Confidence 35667899999655 4445543221 11345678999999998777877 999999999873
No 33
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.74 E-value=3.8e-08 Score=51.60 Aligned_cols=34 Identities=21% Similarity=0.488 Sum_probs=29.5
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+.+.+|+.++|.|.+.+..|.+.|+|||+++.+.
T Consensus 11 ~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~ 44 (97)
T 2bk8_A 11 AVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLE 44 (97)
T ss_dssp EEECTTCCEEEEEEEESCCTTCEEEEEETTEECC
T ss_pred EEEcCCCcEEEEEEEeccCCCCEEEEEECCEECc
Confidence 5789999999999997645899999999998764
No 34
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.74 E-value=2e-08 Score=64.10 Aligned_cols=55 Identities=31% Similarity=0.485 Sum_probs=40.9
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc--eEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA--KIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~--~i~W~~~~~~l~ 64 (65)
+..+.|+|+.+|....+...+ ..+.+|+.++|.|.+.+..|++ .|+|||||+++.
T Consensus 75 ~~~~~l~V~~~P~~~~~~~~~----~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~ 131 (450)
T 1z7z_I 75 TAKTFLTVYWTPERVELAPLP----SWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELK 131 (450)
T ss_dssp EEECEEEEEBCCSEEEECCCC----SEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEE
T ss_pred eeEEEEEEEeCCCcceecCCC----ceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEee
Confidence 445789999988754332221 3688999999999997754444 899999998763
No 35
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.73 E-value=1.8e-09 Score=59.13 Aligned_cols=54 Identities=17% Similarity=0.350 Sum_probs=40.9
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCce-EEEEECCEEcc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAK-IVWYRGNTELK 64 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~-i~W~~~~~~l~ 64 (65)
.....++|+|.+||.... . . .+.+.+|+.++|.|.+. +.|.|. |+|+++++.+.
T Consensus 2 s~~~~~~l~V~~~P~i~~--~-~---~~~~~~G~~v~l~C~~~-g~P~p~~i~W~~~~~~l~ 56 (122)
T 2cry_A 2 SSGSSGTLTVNGPPIISS--T-Q---TQHALHGEKGQIKCFIR-STPPPDRIAWSWKENVLE 56 (122)
T ss_dssp CSSCCCCCCCCSSCCEEE--E-C---CCCCCTTSCCCCCEEEC-CSSCCSEEEEESSSCEEC
T ss_pred ccceEEEEEEecCCCccC--C-C---eEEEecCCCEEEEEEEe-ecCCCcEeEEEECCEEcc
Confidence 345678899999985422 1 1 24689999999999996 567776 99999987753
No 36
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.73 E-value=4.7e-08 Score=56.44 Aligned_cols=53 Identities=21% Similarity=0.350 Sum_probs=42.8
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.|+|..+|..|.+..... .+.+|+.++|.|.+.+ .| +.|+||++|+.+.
T Consensus 99 ~~~~~l~V~~~~~~p~i~~~~~----~~~~g~~v~l~C~~~~-~p-p~i~W~~~g~~l~ 151 (208)
T 3r4d_A 99 QATVRFHVHQPVTQPFLQVTNT----TVKELDSVTLTCLSND-IG-ANIQWLFNSQSLQ 151 (208)
T ss_dssp EEEEEEEEECCCCCCEEEESCS----SCCTTCCEEEEEECSC-TT-CEEEEEETTEECC
T ss_pred EEEEEEEeccCCCCCEEecCCc----eEeeCCCEEEEEECCC-CC-CceEEEECCEeCC
Confidence 3457899999988888876544 2889999999999965 45 7999999998864
No 37
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.73 E-value=1.6e-07 Score=53.26 Aligned_cols=54 Identities=24% Similarity=0.459 Sum_probs=42.0
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
.+..+.|.|..+|. +...+ ....+.+|+.++|.|.+. +.|.+ .++||++|..+.
T Consensus 87 ~~~~~~l~V~~~p~---~~~~~--~~~~~~~g~~~~l~C~~~-g~p~p~~v~W~~~~~~~~ 141 (182)
T 1rhf_A 87 ISQPVWLTVEGVPF---FTVEP--KDLAVPPNAPFQLSCEAV-GPPEPVTIVWWRGTTKIG 141 (182)
T ss_dssp ECCCEEEEEECSCE---EEECC--CCEEECTTCCEEEEEEEE-CSSSCCEEEEEETTEECS
T ss_pred EEEEEEEEEecCCe---EEecC--cceEecCCCEEEEEeEec-CCCCCCEEEEEcCCeECC
Confidence 45678999998874 33322 236789999999999996 47888 999999998863
No 38
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.73 E-value=5e-08 Score=64.32 Aligned_cols=55 Identities=22% Similarity=0.346 Sum_probs=43.6
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcE-EEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEI-TLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~-~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...++|+|..+|..|.|..... .+.+|... .|+|.+.+++|.+.|+|||||+++.
T Consensus 460 ~~~~~l~V~~~~~~p~i~~~~~----~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~ 515 (581)
T 3o3u_N 460 KSNYRVRVYQIPGKPEIVDSAS----ELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLV 515 (581)
T ss_dssp EEEEEEEEEBCCCCCEEESCCS----EECTTSCEEEEEEEEEEEBSCCEEEEEETTEECC
T ss_pred EEEEEEEEEcCCCCCEEEcCCc----ccccCCceeEEEEECCCCCCCCeEEEEECCEECC
Confidence 3468999999999998876543 35555554 6799998888999999999999874
No 39
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.72 E-value=7.2e-08 Score=56.31 Aligned_cols=56 Identities=18% Similarity=0.303 Sum_probs=41.7
Q ss_pred CCCEEEEEEcC----CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAP----PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~p----P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.|+|..+ |..|.+...+. ...+.+|+.++|.|.+. ++|.+.|+|||+|+.+.
T Consensus 91 ~~~~~l~V~~~~~~~~~~p~~~~~~~--~~~~~~g~~v~l~C~~~-g~p~p~v~W~~~g~~l~ 150 (212)
T 2yd6_A 91 SVSTRLTVLREDQIPRGFPTIDMGPQ--LKVVERTRTATMLCAAS-GNPDPEITWFKDFLPVD 150 (212)
T ss_dssp EEEEEEEEECGGGCCTTCCEEEECCC--CEEEETTSCEEEEEEEE-CSSCCEEEEEETTEEC-
T ss_pred EEEEEEEEeccCccCCCcceeecCCc--ceeEecCCCEEEEEEec-CCCCCeEEEEECCcccc
Confidence 44578888864 44456654332 35688999999999996 57999999999998764
No 40
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.71 E-value=1.6e-08 Score=58.95 Aligned_cols=58 Identities=21% Similarity=0.335 Sum_probs=40.8
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
++..+.|.|..++..|.+...+.. ....+|+.++|+|.+.++.|++ .|+|||||+++.
T Consensus 97 ~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~ 155 (210)
T 1lk3_L 97 FGAGTKLELKRADAAPTVSIFPPS--TEQLATGGASVVCLMNNFYPRDISVKWKIDGTERR 155 (210)
T ss_dssp ECCCEEEEECCCCBCCEEEEECCC--HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred eCCCEEEEEcCCCcCCeEEEECCc--hhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCC
Confidence 345678999875545565543221 1234799999999998766764 999999999864
No 41
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.71 E-value=2e-08 Score=59.57 Aligned_cols=57 Identities=16% Similarity=0.326 Sum_probs=41.8
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEE-CCEEc
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYR-GNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~-~~~~l 63 (65)
++..+.|+|.. ++..|.|....... .+.+|+.++|.|.+.+..|.+ .|+|++ ||+.+
T Consensus 111 ~~~~~~L~V~~~~~~~P~i~~~~~~~--~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l 170 (223)
T 1dee_B 111 WGQGTLVTVSSGSASAPTLFPLVSCE--NSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDI 170 (223)
T ss_dssp ECCCEEEEECSSCCBCCEEEEEECTT--CCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBC
T ss_pred ecCcEEEEEccCCCCCCEEEEecCCc--ccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCcc
Confidence 45678999984 55566665321100 357899999999998877877 999999 88765
No 42
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.70 E-value=1.4e-08 Score=59.47 Aligned_cols=58 Identities=21% Similarity=0.302 Sum_probs=41.1
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
++..+.|+|..++..|.+...... ....+|+.++|.|.+.++.|++ .|+|||||+++.
T Consensus 100 ~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~ 158 (216)
T 2xzc_L 100 FGGGTKLEIKRTVAAPSVFIFPPS--DEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQS 158 (216)
T ss_dssp EBCCEEEEECCCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred ECCCEEEEEcCCCCCCceEEeCCC--hhhccCCcEEEEEEEEeEcCCceEEEEEECCeecC
Confidence 456778999766555666542221 0124688999999998877765 999999999863
No 43
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.70 E-value=1.3e-08 Score=54.03 Aligned_cols=50 Identities=18% Similarity=0.489 Sum_probs=28.5
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.|.|..+|.. ... ...+.+.+|+.++|.|.+. +.|.+.|.|||+|..+
T Consensus 2 ~~~v~~~~~P~~---~~~--~~~~~v~~G~~v~l~C~~~-g~p~p~i~W~~~~~~~ 51 (108)
T 3kvq_A 2 QLTVLERVAPTI---TGN--LENQTTSIGESIEVSCTAS-GNPPPQIMWFKDNETL 51 (108)
T ss_dssp ---------CCC---BSC--CCCEEEETTCCEEEECBCC-----CCEEEEESSSBC
T ss_pred ceeECccCCCce---ecC--CCCeEEeCCCeEEEEEECc-CcCCCeEEEEECCeEc
Confidence 355666667643 222 2346889999999999985 5799999999998765
No 44
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.70 E-value=8.8e-08 Score=54.98 Aligned_cols=53 Identities=15% Similarity=0.349 Sum_probs=40.7
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
+..+.|.|..+|. +...+ ....+.+|+.++|.|.+.+ +|.+ .|+|||+|..+.
T Consensus 96 ~~~~~l~V~~~p~---~~~~~--~~~~~~~g~~~~l~C~~~g-~p~p~~v~W~~~~~~~~ 149 (195)
T 2c5d_C 96 SQPGYVGLEGLPY---FLEEP--EDRTVAANTPFNLSCQAQG-PPEPVDLLWLQDAVPLA 149 (195)
T ss_dssp CCCEEEEECCSCE---EEECC--CCEEECTTCCEEEEEEEEC-SSCCCEEEEEESSCBSS
T ss_pred cccEEEEEecCCe---EEcCC--CcEEEcCCCEEEEEeECCC-CCCCCEEEEEECCEecc
Confidence 4558999988873 33322 2367899999999999955 6888 999999998764
No 45
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.69 E-value=1.4e-07 Score=55.51 Aligned_cols=56 Identities=18% Similarity=0.443 Sum_probs=42.9
Q ss_pred CCCEEEEEEcCCCc------------cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSS------------IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~------------~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+..+.|+|..+|.. +.+...+. ...+.+|+.++|.|.+ .++|.+.++||++|..+.
T Consensus 93 s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~v~~G~~v~L~C~~-~g~p~~~v~W~~~~~~~~ 160 (218)
T 3k0w_A 93 SQWSQLDVCDIPESFQRSVDGVSESKLQICVEPT--SQKLMPGSTLVLQCVA-VGSPIPHYQWFKNELPLT 160 (218)
T ss_dssp CCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCC--CEEECTTCCEEEECEE-EBSSCCEEEEEETTEECT
T ss_pred eeEEEEEEEccCcccccccccccCCCceEEECCC--ceeecCCCcEEEEEEe-cccCCCeEEEEECCEECC
Confidence 56689999876532 45544332 3578999999999999 457999999999998864
No 46
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.69 E-value=1.7e-08 Score=58.68 Aligned_cols=58 Identities=17% Similarity=0.299 Sum_probs=41.2
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
++..+.|.|...+..|.+...... ....+|+.++|.|.+.++.|++ .|+|||||+++.
T Consensus 98 ~~~~~~l~V~~~~~~p~v~~~~~~--~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~ 156 (213)
T 3d9a_L 98 FGGGTKLEIKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 156 (213)
T ss_dssp ECCCEEEEECCCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred eCCCEEEEEecCCCCceeEeECCC--hhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCc
Confidence 455678999875545565442221 1234789999999998767776 899999998764
No 47
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.68 E-value=1.3e-08 Score=59.67 Aligned_cols=57 Identities=23% Similarity=0.380 Sum_probs=41.9
Q ss_pred cCCCEEEEEEcC-CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEc
Q psy7728 5 YGPRTRLYQFAP-PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~p-P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l 63 (65)
++..+.|+|... +..|.+...... ..+.+|+.++|.|.+.+++|.+ .|+|+|+|+.+
T Consensus 109 ~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 167 (219)
T 1c1e_H 109 WGQGTSLTVSSAKTTPPSVYPLAPG--SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 167 (219)
T ss_dssp ECCCEEEEECCCCCBCCEEEEECCC--SSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred ecCceEEEEecCCCCCCeEEEecCc--cccccCCeEEEEEEcccccCCCeEEEEEeCCccc
Confidence 556789999873 455666432211 1357899999999998768988 99999998753
No 48
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.68 E-value=6.3e-08 Score=56.01 Aligned_cols=55 Identities=11% Similarity=0.145 Sum_probs=40.9
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+..+.|.|..++..|.+...+. ..+.+|+.++|.|.+.+ +++.+.|||+|+.+
T Consensus 84 ~~s~~~~l~V~~~~~~p~i~~~p~---~~v~~G~~v~L~C~~~~--~~~~~~w~k~g~~~ 138 (188)
T 1oll_A 84 EPSNLLDLVVTEMYDTPTLSVHPG---PEVISGEKVTFYCRLDT--ATSMFLLLKEGRSS 138 (188)
T ss_dssp CCCCCEEEEEESCSCCCEEEEESC---SEEETTCEEEEEEECSS--SCSEEEEEEESSSC
T ss_pred CCCCceEEEecccCCCCeEEECCC---CccccCCEEEEEEEcCC--CCCEEEEEECCccc
Confidence 346778999987655667764443 25789999999999854 55799999998643
No 49
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.68 E-value=1.6e-08 Score=59.53 Aligned_cols=57 Identities=25% Similarity=0.381 Sum_probs=41.7
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEc
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l 63 (65)
++..+.|+|.. ++..|.+....... .+.+|+.++|.|.+.+..|.+ .|+|+++|+.+
T Consensus 112 ~~~~~~l~V~~~~~~~P~i~~~~~~~--~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 170 (222)
T 1q9r_B 112 WGQGTLVTVSAAKTTPPSVYPLAPGS--AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 170 (222)
T ss_dssp BCCCEEEEECSSCCBCCEEEEECCCS--CCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred eCCceEEEeccCCCCCCeEEEccccc--cccCCCcEEEEEEEccEECCCCEEEEecCCeEc
Confidence 55678999986 34556665432211 356899999999998777888 99999998654
No 50
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=98.67 E-value=1e-07 Score=63.40 Aligned_cols=54 Identities=13% Similarity=0.223 Sum_probs=43.1
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+..+.|+|..+|..+.+.. ....+.+|+.++|.|.+. +.|++.|+|||||..+.
T Consensus 548 s~~~~l~V~~~p~~~~~~~----~~~~v~~g~~~~l~C~~~-g~p~p~v~W~~~g~~i~ 601 (642)
T 1e07_A 548 SDPVTLDVLYGPDTPIISP----PDSSYLSGANLNLSCHSA-SNPSPQYSWRINGIPQQ 601 (642)
T ss_pred CCCEEEEEEeCCCcceecC----CceeEEcCCcEEEEEEec-cCCCCeEEEEECCEECc
Confidence 3468999998887665532 225789999999999995 57999999999999874
No 51
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.67 E-value=1.3e-08 Score=54.19 Aligned_cols=32 Identities=22% Similarity=0.579 Sum_probs=26.8
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+.+.+|+.++|.|.+. .|.+.++|||||+++.
T Consensus 16 v~~~~g~~v~l~C~v~--~p~~~v~W~k~g~~i~ 47 (91)
T 2lvc_A 16 VHAITSECVMLACEVD--REDAPVRWYKDGQEVE 47 (91)
T ss_dssp EECCTTCCEEEEEECS--CTTSCCEEEETTSCCC
T ss_pred EEEECCCcEEEEEEEC--CCCcEEEEEECCEEee
Confidence 4567899999999983 3888999999998764
No 52
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.67 E-value=6.1e-08 Score=57.95 Aligned_cols=57 Identities=16% Similarity=0.316 Sum_probs=38.8
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecC-CcEEEEEEecCCCCCc-eEEEEE-CCEEc
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIREN-QEITLECLVKNAKPAA-KIVWYR-GNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G-~~~~L~C~~~~~~P~~-~i~W~~-~~~~l 63 (65)
++..+.|+|.. ++..|.+...... ..+.+| +.++|.|.+.++.|.+ .|+|++ ||+.+
T Consensus 110 ~~~~~~L~V~~~~~~~P~v~~~~p~--~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l 170 (232)
T 1dn0_B 110 WGQGTLVTVSSGSASAPTLFPLVSC--ENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDI 170 (232)
T ss_dssp ECCCEEEEECSSCCBCCEEEEEECC--------CCSEEEEEEEEEEBSSCCEEEEEETTSCEE
T ss_pred cccceEEEEccCCCCCCceEEeccc--cccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCce
Confidence 56678999987 5555666432210 134578 9999999999877876 999999 88765
No 53
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.67 E-value=1.8e-08 Score=59.56 Aligned_cols=54 Identities=20% Similarity=0.380 Sum_probs=40.2
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.|.|..+|..+.+.. .....+.+.+|+.++|.|.+.+ .|.|.|+|||+++.+
T Consensus 124 ~~~l~V~~~~~~~~~~~-~~~~~~~v~~g~~v~L~C~~~g-~p~p~v~W~k~~~~~ 177 (250)
T 2fbo_J 124 SVVLKVTGHTPSNNVHV-STAEVVQVDEGNDITMTCPCTD-CANANVTWYTGPTFF 177 (250)
T ss_dssp EEEEEETTTSCCSCCEE-CCCSEEECCTTCCEEECCCEES-CTTCEEEEEEEEECS
T ss_pred eEEEEEeccCCCCeEEE-ecCceEEecCCCcEEEEEEecC-CCCCeeEEEeCCCcc
Confidence 68899988744444333 2234567888999999999965 577799999998765
No 54
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.66 E-value=1.9e-08 Score=58.04 Aligned_cols=55 Identities=15% Similarity=0.279 Sum_probs=41.2
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+..+.|+|.+.|..... ......+.+|+.++|.|.+..++|.+.++||++|+.+.
T Consensus 100 ~~~~~l~V~~~~~~~~~----~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~ 154 (212)
T 2v9r_A 100 SHDASLEVAILRDDFRQ----NPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLD 154 (212)
T ss_dssp CCCEEEEECEECSSCSB----CCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEEC
T ss_pred ecceEEEEEecccccee----CCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCC
Confidence 45678888875433211 12235789999999999986678999999999998864
No 55
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.66 E-value=1e-07 Score=56.83 Aligned_cols=56 Identities=13% Similarity=0.137 Sum_probs=42.8
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+..+.|.|...+..|.+...+. ..+.+|+.++|.|.+. +.|++.+.|||+|..+
T Consensus 91 ~~s~~~~l~V~~~~~~P~i~~~p~---~~v~~G~~v~L~C~~~-~~~~~~~~W~k~g~~~ 146 (218)
T 1uct_A 91 RYSDTLELVVTGLYGKPFLSADRG---LVLMPGENISLTCSSA-HIPFDRFSLAKEGELS 146 (218)
T ss_dssp EECCCEEEEEECSSCCCEEEESSC---SEECTTCCCEEEEECS-SSCCSEEEEEETTCSS
T ss_pred eecCCEEEEEcCcccCCEEEeCCC---CccCCCCCEEEEEeCC-CCCCCEEEEEECCCcc
Confidence 446778999987666677765443 2678999999999653 4678899999998754
No 56
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.66 E-value=1.9e-07 Score=56.08 Aligned_cols=58 Identities=22% Similarity=0.275 Sum_probs=43.2
Q ss_pred cCCCEEEEEEcC-CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAP-PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~p-P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+..+.|+|... +..|.+...+. ...+.+|+.++|.|.+.+++|.+.|+|+++|+.+.
T Consensus 171 ~~~~~~l~V~~~~~~~p~i~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~ 229 (289)
T 3ejj_X 171 TSTGIWLKVNRVHPEPPQIKLEPS--KLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLE 229 (289)
T ss_dssp ECCCEEEEEESSCCCCCEEEEESS--SEECCSSSCEEEEEEEEESSSCCEEEEEETTEECC
T ss_pred ccccEEEEEEECCCCCCeEEecCC--ceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEee
Confidence 456788999842 23445544332 24567999999999998768999999999998763
No 57
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.66 E-value=2.3e-08 Score=58.14 Aligned_cols=58 Identities=24% Similarity=0.381 Sum_probs=41.7
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~~~~l~ 64 (65)
++..+.|.|..++..|.+...+.. .....|+.++|.|.+.++.| .+.|+|||||+.+.
T Consensus 98 ~~~~~~l~V~~~~~~p~v~~~~~~--~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 156 (213)
T 3r06_A 98 FGPGTKLEIKRADAKPTVSIFPPS--SEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKR 156 (213)
T ss_dssp ECCCEEEEECCCCBCCEEEEECCC--HHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred EcCCceEEEeccCCCceeeeeCCC--ceecCCCCcEEEEEEeeecCCceEEEEEECCcccC
Confidence 466789999666666666543321 13456888999999987665 46899999998764
No 58
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.66 E-value=8.3e-08 Score=50.90 Aligned_cols=32 Identities=16% Similarity=0.256 Sum_probs=27.5
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+.+.+|+.++|.|.+.+ |++.|+|||||+++.
T Consensus 15 ~~v~~G~~v~l~C~v~~--~~~~v~W~k~g~~i~ 46 (93)
T 1waa_A 15 VEVFVGETAHFEIELSE--PDVHGQWKLKGQPLA 46 (93)
T ss_dssp EEEETTSCEEEEEEESS--SSCCCEEEETTEECC
T ss_pred eEEeCCCCEEEEEEECC--CCCeEEEEECCEECc
Confidence 57899999999999953 557899999999874
No 59
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.66 E-value=6.5e-08 Score=50.78 Aligned_cols=32 Identities=28% Similarity=0.577 Sum_probs=28.0
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
..+.+.+|+.++|.|.+.++.|.+.|+|||++
T Consensus 18 ~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~ 49 (98)
T 1gl4_B 18 RSQSVRPGADVTFICTAKSKSPAYTLVWTRLH 49 (98)
T ss_dssp CEEEECTTCCEEEEEEEEESSSCCEEEEEEGG
T ss_pred CCeEEecCCCEEEEEeCCCCCCCcEEEEEeCC
Confidence 45678999999999999866899999999974
No 60
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.66 E-value=1.1e-07 Score=55.44 Aligned_cols=57 Identities=16% Similarity=0.340 Sum_probs=42.6
Q ss_pred cCCCEEEEEEcCCCc----cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSS----IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~----~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
....+.|+|..++.. |.+...+ ....+.+|+.++|.|.+. ++|++.|+||+++..+.
T Consensus 92 ~~~~~~l~V~~~~~~~~~~p~~~~~~--~~~~~~~g~~v~l~C~~~-g~p~p~i~W~~~~~~~~ 152 (212)
T 2yd1_A 92 VSADATLTIYEGDKTPAGFPVITQGP--GTRVIEVGHTVLMTCKAI-GNPTPNIYWIKNQTKVD 152 (212)
T ss_dssp EEEEEEEEEECTTCSCTTCCEEEECC--CCEEEETTCCEEECCEEE-CSSCCEEEEEETTEECC
T ss_pred EEeeEEEEEecccCCCCCCCeeEeCC--CceEeecCCeEEEEEEec-cCCCCeEEEEECCeEcc
Confidence 345678899876432 4555433 235788999999999995 57999999999998864
No 61
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.66 E-value=7.4e-08 Score=57.93 Aligned_cols=45 Identities=16% Similarity=0.313 Sum_probs=36.9
Q ss_pred cCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc--eEEEEECCEEcc
Q psy7728 15 APPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA--KIVWYRGNTELK 64 (65)
Q Consensus 15 ~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~--~i~W~~~~~~l~ 64 (65)
.||..|.+... . .+.+|+.++|.|.+.+++|++ .|+|||||+.+.
T Consensus 2 ~P~~~p~~~~~-~----~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~ 48 (265)
T 2oz4_A 2 LPATPPQLVSP-R----VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLN 48 (265)
T ss_dssp CCSSCCEEECC-S----EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECC
T ss_pred CCCCCCccccC-c----eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECC
Confidence 46777777642 2 689999999999998778877 999999999874
No 62
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.66 E-value=5.8e-08 Score=56.51 Aligned_cols=46 Identities=22% Similarity=0.258 Sum_probs=36.6
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+.|+|+.++..|.+.. +++.++|+|.+..+ |.+.|+||+|++.+
T Consensus 96 ~~~~L~V~~~~~~P~i~~----------~~~~v~L~C~~~~g-p~p~i~W~~~~~~l 141 (180)
T 2dru_A 96 WKITMEVYEMVSKPMIYW----------ECSNATLTCEVLEG-TDVELKLYQGKEHL 141 (180)
T ss_dssp EEEEEEEECCCCCCEEEE----------EGGGTEEEEECSSC-TTCEEEEEETTEEE
T ss_pred EEEEEEEECCCCCCEEEe----------cCCCEEEEEEeCCC-CCCEEEEEECCeEC
Confidence 457899998887777642 34569999999666 99999999999875
No 63
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.65 E-value=9.3e-08 Score=54.51 Aligned_cols=52 Identities=15% Similarity=0.344 Sum_probs=39.6
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
...+.|.|..+|. +...+ ....+.+|+.++|.|.+. ++|++.++||+++..+
T Consensus 90 ~~~~~l~v~~~p~---~~~~~--~~~~~~~g~~~~l~C~~~-g~p~~~v~W~~~~~~~ 141 (191)
T 1epf_A 90 EATVNVKIFQKLM---FKNAP--TPQEFKEGEDAVIVCDVV-SSLPPTIIWKHKGRDV 141 (191)
T ss_dssp EEEEEEEEECCSE---EEECC--SSEECCTTSCEEECCEEE-CSSCCEEEEEETTEEG
T ss_pred EEEEEEEeecCce---EecCC--CcEeecCCCeEEEEEEEC-CCCCCEEEEEECCEEe
Confidence 3456788877763 33222 235789999999999997 6799999999999876
No 64
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.65 E-value=6.2e-08 Score=55.27 Aligned_cols=55 Identities=18% Similarity=0.365 Sum_probs=41.5
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.|.|...+..|.+.... ....+.+|+.++|.|.+. ++|.+.++|||+|+.+.
T Consensus 91 ~~~~l~v~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~-g~p~~~v~W~~~~~~~~ 145 (194)
T 2a38_A 91 STAELLVKAETAPPNFVQRL--QSMTVRQGSQVRLQVRVT-GIPTPVVKFYRDGAEIQ 145 (194)
T ss_dssp EEEEEEEECCCEEEEEEECC--CCEEECTTEEEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred EEEEEEEccCCCCCEEEeCC--ccEEEcCCCEEEEEEEEE-EecCCeEEEEECCEECC
Confidence 34678888655555555433 235789999999999995 57999999999998764
No 65
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.64 E-value=6.6e-08 Score=50.57 Aligned_cols=34 Identities=15% Similarity=0.454 Sum_probs=29.8
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.+|+.++|.|.+. +.|.+.|+|||||+.+.
T Consensus 14 ~~~v~~G~~v~l~C~~~-g~p~p~v~W~k~g~~~~ 47 (99)
T 1g1c_A 14 SQTVGQGSDAHFRVRVV-GKPDPECEWYKNGVKIE 47 (99)
T ss_dssp CEEEETTSCEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred ceEEcCCCcEEEEEEEE-EeCCCEEEEEECCEECC
Confidence 35789999999999996 57999999999998864
No 66
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.63 E-value=5.7e-08 Score=56.54 Aligned_cols=58 Identities=24% Similarity=0.407 Sum_probs=39.1
Q ss_pred cCCCEEEEEEcCC-CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPP-SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP-~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
++..+.|.|...+ ..|.+...... ....+|+.++|.|.+.+..|++ .|+|||||+++.
T Consensus 100 ~~~~~~l~V~~~~~~~P~v~~~~~~--~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~ 159 (212)
T 1q0x_L 100 FGGGTKLTVLGQPKSSPTVTLFPPS--SEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVT 159 (212)
T ss_dssp ECCCEEEEECCSCCBCCEEEEECCC--HHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred cCCCeEEEEecCCCCCCeeEEeCCC--HHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCC
Confidence 4566788886433 34455432221 1235789999999998766664 999999998763
No 67
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.63 E-value=1.7e-08 Score=58.82 Aligned_cols=58 Identities=28% Similarity=0.489 Sum_probs=41.1
Q ss_pred cCCCEEEEEEcCC-CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPP-SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP-~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
++..+.|.|...+ ..|.+...... ..+.+|+.++|.|.+.+..|+ +.|+|||||+++.
T Consensus 98 ~~~~~~l~V~~~~~~~p~v~~~~~~--~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~ 157 (212)
T 1nfd_E 98 FGSGTQLTVLRGPKSSPKVTVFPPS--PEELRTNKATLVCLVNDFYPGSATVTWKANGATIN 157 (212)
T ss_dssp ECCCEEEEEECCCCBCCEEECCCCC--HHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEEC
T ss_pred cCCceEEEEccCCCCCCEEEeeCCc--hHhccCCceEEEEEEEeeECCccEEEEEECCeEcC
Confidence 4566888887544 34555543321 124679999999999877676 8999999998863
No 68
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.63 E-value=8.5e-09 Score=59.17 Aligned_cols=58 Identities=12% Similarity=0.173 Sum_probs=39.8
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.|+|..+|....-........+.+.+|+.++|.|.+. ++|++.|+|||+++.+.
T Consensus 89 ~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~~~~~~~~ 146 (197)
T 2j8h_A 89 SGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFS-GKPDPVITWQKGQDLID 146 (197)
T ss_dssp EEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEE-EESCCEEEEEESSCEEC
T ss_pred eEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEE-ecCCCcEEEEECCEEee
Confidence 44578888876532110001112345788999999999996 57999999999998763
No 69
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.62 E-value=1.9e-08 Score=58.76 Aligned_cols=55 Identities=22% Similarity=0.375 Sum_probs=40.1
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEE-CCEEc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR-GNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~-~~~~l 63 (65)
...+.|.|..++..|.+...+. ..+.+|+.++|.|.+..+.|.+.|+|++ ++..+
T Consensus 98 ~~~~~l~V~~~~~~p~i~~~~~---~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~ 153 (222)
T 4i0k_A 98 SAAVSLQVAAPYSKPSMTLEPN---KDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPL 153 (222)
T ss_dssp CCCCCCCCCBCCCCCEEECCC--------CCSEEEEEEEEEEEBSCCEEEEECTTSCBC
T ss_pred eEEEEEEEEcCCCCCcEEeCCC---ceecCCceEEEEEecccccCCCeEEEEcCCCccC
Confidence 4456788888888888765443 2578899999999997788999999999 45443
No 70
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.62 E-value=5.6e-08 Score=50.94 Aligned_cols=34 Identities=21% Similarity=0.476 Sum_probs=29.7
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. +.|.+.|.|||||+.+.
T Consensus 14 ~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~g~~~~ 47 (100)
T 2kdg_A 14 NMSIDEGRFCRMDFKVS-GLPAPDVSWYLNGRTVQ 47 (100)
T ss_dssp CEEEETTCCEEEEEECE-EESCCEEEEEETTEEEC
T ss_pred CEEecCCCEEEEEEEEE-eeCCCEEEEEECCEECc
Confidence 46789999999999986 57999999999998764
No 71
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.62 E-value=2.9e-07 Score=54.52 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=40.9
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+..+.|+|..+|. .+.... ..+.+|+.++|.|.+..+.|.+.++|||+|+.+
T Consensus 72 ~s~~~~l~v~~~~~--~~~~~~----~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~ 124 (262)
T 3rjd_A 72 RSDPIQLEIHRGWL--LLQVSS----RVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAF 124 (262)
T ss_dssp CCCCEEEEEECSSE--EEEESC----SEEETTSCEEEEEEEGGGCCCEEEEEEETTEEE
T ss_pred ccccEEEEEeccce--EecCCC----eEEecCCeEEEEEEccCCCCCceEEEEECCccc
Confidence 34568899987652 232222 267899999999999777899999999999876
No 72
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.61 E-value=3.2e-08 Score=58.68 Aligned_cols=56 Identities=21% Similarity=0.382 Sum_probs=40.9
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~ 62 (65)
++..+.|+|.. ++..|.+....... .+.+|+.++|.|.+.+..|.+ .|+|+|+++.
T Consensus 113 ~~~~~~L~V~~~~~~~P~v~~~~~~~--~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 170 (225)
T 1op3_H 113 WGPGTVVTVSPASTKGPSVFPLAPSS--KSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 170 (225)
T ss_dssp ECCCEEEEEESCSCBCCEEEEECCCT--TCCCCCEEEEEEEEEEEBSSCCEEECCTTSCC
T ss_pred ecCCEEEecccCCCcCCeEEEecccc--cccCCCcEEEEEEEEeEECCCeEEEEecCCCc
Confidence 45678999997 44556664322111 246899999999998777876 9999999864
No 73
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.61 E-value=2.4e-08 Score=53.79 Aligned_cols=53 Identities=21% Similarity=0.322 Sum_probs=37.4
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
....+.|+|..+|. .+...+ ....+.+|+.++|.|.+.+ . +.++||||++.+.
T Consensus 7 ~~~~~~l~V~~~pp--~~~~~~--~~~~v~~G~~v~l~C~~~~-~--p~v~W~k~~~~l~ 59 (113)
T 2edh_A 7 GRTSAMLTVRALPI--KFTEGL--RNEEATEGATAVLRCELSK-M--APVEWWKGHETLR 59 (113)
T ss_dssp CCCCCCCCCCCSCC--CEEECC--CCCEECTTSCEEEEEEESS-C--CCCEEEESSSBCC
T ss_pred CcEEEEEEEEcCCC--cccccC--CceEEeCCCeEEEEEEECC-C--CcEEEEECCEECC
Confidence 34567888886652 333222 2347899999999999954 2 6899999998763
No 74
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.61 E-value=7.5e-08 Score=50.75 Aligned_cols=34 Identities=26% Similarity=0.495 Sum_probs=29.6
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. +.|.+.|+|||||+.+.
T Consensus 17 ~~~v~~G~~v~l~C~~~-g~p~p~i~W~k~~~~~~ 50 (103)
T 3qp3_A 17 SHRVPCGQNTRFILNVQ-SKPTAEVKWYHNGVELQ 50 (103)
T ss_dssp CEEEETTCCEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred ceEEeCCCeEEEEEEEE-ecCCCEEEEEECCEECC
Confidence 35789999999999996 47999999999998864
No 75
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.61 E-value=7.7e-08 Score=50.56 Aligned_cols=43 Identities=16% Similarity=0.348 Sum_probs=32.9
Q ss_pred ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 19 SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 19 ~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.|.+...+ ..+.+.+|+.++|.|.+. ++|.+.|+|||+++.+.
T Consensus 8 ~P~i~~~p--~~~~v~~G~~~~l~C~~~-g~p~p~v~W~~~~~~~~ 50 (100)
T 2edj_A 8 PPIILQGP--ANQTLAVDGTALLKCKAT-GDPLPVISWLKEGFTFP 50 (100)
T ss_dssp SCEEEECC--CCEEEESSSEEEECCEEE-CSSCCEEEEEESSSEES
T ss_pred CCEEEeCc--CCEEEcCCCcEEEEEEEE-EcCCCEEEEEECCEECC
Confidence 34554333 235788999999999996 57999999999997764
No 76
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=98.61 E-value=4.4e-08 Score=53.15 Aligned_cols=47 Identities=19% Similarity=0.447 Sum_probs=32.0
Q ss_pred EEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 9 TRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 9 ~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
++|+|.+||..... .. ........|.|.+.+ +|.+.|+|||||+.+.
T Consensus 1 v~L~V~~pP~i~~~---~~-----~~~~~~~~l~C~~~g-~P~p~i~W~k~g~~l~ 47 (118)
T 1wwc_A 1 VALTVYYPPRVVSL---EE-----PELRLEHCIEFVVRG-NPPPTLHWLHNGQPLR 47 (118)
T ss_dssp ---CCCCCCCCCCC---CC-----CCCCCEEEEEEEEEC-SSCCEEEEEETTEECC
T ss_pred CEEEEecCCceecc---CC-----CeeccceEEEEEeee-eCCCeEEEEECCEECC
Confidence 47889999974332 21 112255789999965 8999999999999874
No 77
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.60 E-value=4.7e-09 Score=66.18 Aligned_cols=56 Identities=18% Similarity=0.342 Sum_probs=7.9
Q ss_pred ccCCCEEEEEEcCCCc-cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc--eEEEEECCEEcc
Q psy7728 4 RYGPRTRLYQFAPPSS-IEIVGHPSNSKIEIRENQEITLECLVKNAKPAA--KIVWYRGNTELK 64 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~-~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~--~i~W~~~~~~l~ 64 (65)
..+.+..|+|+++|.. +.+.. +. .+.+|+.++|+|.+.+.+|++ .|.|++||+.+.
T Consensus 175 ~~s~~~~L~V~~~P~~~~~~~~-p~----~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~ 233 (291)
T 1mq8_A 175 NTSAPYQLQTFVLPATPPQLVS-PR----VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLN 233 (291)
T ss_dssp ECCCCEECBC------------------------------------------------------
T ss_pred ccccceEEEEEecCCCCceecC-Cc----CccCCCeEEEEEEcCCCCCCcccEEEEEECCEecC
Confidence 3567889999998654 44433 22 688999999999997766763 699999998763
No 78
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.60 E-value=6.7e-08 Score=62.69 Aligned_cols=53 Identities=17% Similarity=0.207 Sum_probs=40.1
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+.|+|..+|. +...+....+.+.+|+.++|.|.+. +.|++.|+|||||++|
T Consensus 315 ~~~~L~V~~~p~---i~~~~~~~~~~v~~G~~v~l~C~~~-g~P~p~i~W~k~g~~l 367 (423)
T 3qs7_E 315 QSALVTIVEKGF---INATNSSEDYEIDQYEEFCFSVRFK-AYPQIRCTWTFSRKSF 367 (423)
T ss_dssp EEEEEEEESSCE---EEEC---CEECCCTTCCCCEEEEEE-EESCCEEEEEETTEEE
T ss_pred ceEEEEEEeCCc---ceEcCCCccEEecCCCeEEEEEEEE-EcCCCeEEEEECCEEC
Confidence 457899998763 3333322346788999999999995 5799999999999987
No 79
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.60 E-value=1.2e-07 Score=54.88 Aligned_cols=55 Identities=15% Similarity=0.205 Sum_probs=42.3
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+..+.|.|..++..|.+...+.. .+.+|+.++|.|.+.+ +++.+.|||+|..+
T Consensus 85 ~~s~~~~l~V~~~~~~p~~~~~~~~---~v~~G~~v~L~C~~~~--~~~~~~w~k~g~~~ 139 (196)
T 3p2t_A 85 QPSDPLELVMTGAYSKPTLSALPSP---LVTSGKSVTLLCQSRS--PMDTFLLCKERAAH 139 (196)
T ss_dssp CCCCCEEEEEECSSCCCEEEEESCS---EECTTCCEEEEEEEEE--EEEEEEEEETTCCC
T ss_pred CCCccEEEEecCCCCCCEEEeCCcc---eecCCCeEEEEEecCC--CCCEEEEEeCCCcc
Confidence 4567789999887767777654432 5789999999999865 45689999998754
No 80
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.60 E-value=8.8e-08 Score=50.07 Aligned_cols=33 Identities=21% Similarity=0.564 Sum_probs=28.9
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+|+.++|.|.+. +.|.+.|.|||+++.+.
T Consensus 15 ~~v~~G~~v~l~C~~~-g~p~p~v~W~k~~~~~~ 47 (99)
T 1u2h_A 15 QSVREGQDVIMSIRVQ-GEPKPVVSWLRNRQPVR 47 (99)
T ss_dssp EEEETTCCEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred eEecCCCEEEEEEEEE-EcCCCEEEEEECCEECC
Confidence 4789999999999995 47889999999998864
No 81
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.60 E-value=1.9e-07 Score=56.10 Aligned_cols=53 Identities=23% Similarity=0.458 Sum_probs=40.4
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.|+|..+|.. .. .+....+.+|+.++|.|.+. +.|++.++||++|+.+.
T Consensus 182 ~~~~~l~V~~~p~~---~~--~~~~~~~~~g~~v~l~C~~~-g~p~~~v~W~~~~~~~~ 234 (284)
T 2rik_A 182 SSSTSLKVKEPPVF---RK--KPHPVETLKGADVHLECELQ-GTPPFQVSWHKDKRELR 234 (284)
T ss_dssp EEEEEEEEECCCBC---CS--CCCCEEECTTCCEEEEEECB-SSSCCEEEEEETTEEEC
T ss_pred eEEEEEEEecCCcc---ee--CCCcceecCCCeEEEEEEEE-ecCCCEEEEEECCEECc
Confidence 44678899888743 21 12235788999999999995 57999999999998763
No 82
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.59 E-value=1.5e-07 Score=54.27 Aligned_cols=47 Identities=23% Similarity=0.253 Sum_probs=36.0
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.|+|..++..|.+.. .+..++|+|.+.+ .|++.|+|||||+.+.
T Consensus 91 ~~~~l~V~~~~~~p~i~~----------~~~~v~L~C~~~g-~p~p~i~W~~~g~~l~ 137 (176)
T 1hng_A 91 KALDLRILEMVSKPMIYW----------ECSNATLTCEVLE-GTDVELKLYQGKEHLR 137 (176)
T ss_dssp EEEEEEEECCCCCCEEEE----------ETTTTEEEEECSS-CSSCEEEEEETTEEEE
T ss_pred EEEEEEEeCCCCCCEEEe----------cCCcEEEEEEecC-CCCcEEEEEECCEECC
Confidence 347888998877776642 2445899999865 5779999999998763
No 83
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.59 E-value=1.7e-07 Score=57.14 Aligned_cols=58 Identities=14% Similarity=0.270 Sum_probs=43.6
Q ss_pred ccCCCEEEEEEcCCC----ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 4 RYGPRTRLYQFAPPS----SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~----~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.....+.|+|..++. .|.+...+ ....+.+|+.++|.|.+. ++|.+.|+|||+|..+.
T Consensus 89 ~~~~~~~l~V~~~~~~p~~~p~i~~~~--~~~~v~~g~~v~l~C~~~-g~p~~~v~W~k~~~~~~ 150 (304)
T 2yd9_A 89 EITVHAKLTVLREDQLPSGFPNIDMGP--QLKVVERTRTATMLCAAS-GNPDPEITWFKDFLPVD 150 (304)
T ss_dssp EECCEEEEEEECGGGCCTTCCEEEECC--CCEEEETTSCEEECCEEE-CSSCCEEEEEETTEECC
T ss_pred eEEEEEEEEEeccccCCCCCCeeecCC--ccEEEeCCCeEEEEEECc-cCCCCeEEEEECCEECc
Confidence 345678899987533 25565433 235788999999999995 57999999999998763
No 84
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.59 E-value=3.8e-08 Score=57.44 Aligned_cols=56 Identities=23% Similarity=0.377 Sum_probs=41.2
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~ 62 (65)
++..+.|.|.. ++..|.+...+.. ..+.+|+.++|.|.+.+..|.+ .|+|++++..
T Consensus 103 ~~~~~~l~V~~~~~~~P~v~~~~~~--~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 160 (210)
T 3d9a_H 103 WGQGTLVTVSAAKTTPPSVYPLAPG--SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 160 (210)
T ss_dssp BCCCEEEEECCCCCBCCEEEEECCT--TSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred cccceEEEeccCCCCCCEEEEecCC--cccccCCcEEEEEEEeeEecCCcEEEEeeCCcc
Confidence 45678999984 4555666533311 1357899999999998777888 9999999874
No 85
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.58 E-value=5.5e-08 Score=56.57 Aligned_cols=59 Identities=24% Similarity=0.465 Sum_probs=40.8
Q ss_pred ccCCCEEEEEEcCC-CccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEECCEEcc
Q psy7728 4 RYGPRTRLYQFAPP-SSIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRGNTELK 64 (65)
Q Consensus 4 ~~~~~~~L~V~~pP-~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~~~~l~ 64 (65)
.++..+.|.|...+ ..|.+...+.. ..+.+|+.++|.|.+.+..| .+.++|||||+++.
T Consensus 95 ~~~~~~~l~V~~~~~~~P~v~~~~~~--~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 155 (211)
T 3tv3_L 95 IFGGGTKLTVLGQPKAAPSVTLFPPS--SEELQANKATLVCLISDFYPGAVTVAWKADSSPVK 155 (211)
T ss_dssp EECCCEEEEECCSCCBCCEEEEECCC--HHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred eECCCceEEEeCCCCcCCeeEecCCc--hhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecC
Confidence 35677899998432 34455433321 12347999999999987654 68999999999863
No 86
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.58 E-value=3e-08 Score=57.69 Aligned_cols=55 Identities=13% Similarity=0.308 Sum_probs=40.2
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+..+.|.|.+.|....+ . .....+.+|+.++|.|.+..++|.+.++|||+|+.+.
T Consensus 97 ~~~~~l~v~~~~~~~~~--~--~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~ 151 (217)
T 2vr9_A 97 SRHASLQIAVLRDDFRV--E--PKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLD 151 (217)
T ss_dssp CCCEEEEECEECCSCSB--C--CCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEEC
T ss_pred cccceEEEEEeCCCcEE--C--CCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCC
Confidence 34677888763322211 1 1235789999999999986778999999999998764
No 87
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.58 E-value=5.3e-08 Score=58.37 Aligned_cols=58 Identities=17% Similarity=0.312 Sum_probs=40.5
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
++..+.|+|..++..|.+...... ..+.+|+.++|.|.+.+..|++ .|+|||||+++.
T Consensus 136 ~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~ 194 (252)
T 3bkj_L 136 FGAGTKLELKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 194 (252)
T ss_dssp ECCCEEEEECCCCBCCEEEEECCC--HHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred ECCCEEEEEeCCCcCcEEEEeCCC--hhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecC
Confidence 455678999765445555442221 1234789999999998877764 899999998763
No 88
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.58 E-value=1.1e-07 Score=49.49 Aligned_cols=35 Identities=26% Similarity=0.646 Sum_probs=30.0
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+.+|+.++|.|.+. +.|.+.|.|||+++.+.
T Consensus 13 ~~~~~~~G~~~~l~C~~~-g~p~p~v~W~~~~~~~~ 47 (100)
T 3irg_A 13 SDISIDEGKVLTVACAFT-GEPTPEVTWSCGGRKIH 47 (100)
T ss_dssp SEEEEETTSEEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred CcEEEcCCCcEEEEEEEE-EcCCCceEEEECCEEee
Confidence 356789999999999995 47899999999998863
No 89
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=98.58 E-value=1.7e-07 Score=57.16 Aligned_cols=55 Identities=18% Similarity=0.373 Sum_probs=41.6
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.|.|.+.+..|.+...+. ...+.+|+.++|.|.+. ++|++.|+|||||+.+.
T Consensus 193 ~~~~l~v~~~~~~P~~~~~~~--~~~v~~G~~v~l~C~~~-g~p~p~v~W~~~~~~l~ 247 (304)
T 2yd9_A 193 SPANLYVRVQNVAPRFSILPM--SHEIMPGGNVNITCVAV-GSPMPYVKWMQGAEDLT 247 (304)
T ss_dssp CCEEEEEECCCEEEEEEECCC--CBCCCTTCCEEEEEEEE-EESCCEEEEEETTEECS
T ss_pred ccEEEEEEeeccCCcEEecCC--ceEEcCCCeEEEEEEEe-eeCCCEEEEEECCEECC
Confidence 347888876555556654432 24688999999999996 57999999999999874
No 90
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.58 E-value=8.6e-09 Score=54.23 Aligned_cols=34 Identities=24% Similarity=0.624 Sum_probs=29.1
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. +.|.+.|.|||+|+.+.
T Consensus 20 ~~~v~~G~~v~l~C~~~-g~p~p~v~W~~~g~~~~ 53 (99)
T 2yr3_A 20 DCAVIEGQDFVLQCSVR-GTPVPRITWLLNGQPIQ 53 (99)
T ss_dssp CEEECTTCCEEEECEEE-EESCCCCEEEESSSBCS
T ss_pred CCEEeCCCeEEEEEEEe-eeCCCeEEEEECCEECc
Confidence 35789999999999995 57999999999987653
No 91
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.57 E-value=4.9e-08 Score=58.29 Aligned_cols=59 Identities=29% Similarity=0.517 Sum_probs=41.0
Q ss_pred cCCCEEEEEEcC---CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAP---PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~p---P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
++..+.|+|..+ +..|.+..... ....+.+|+.++|.|.+.+..|+ +.|+|+|||+++.
T Consensus 103 ~~~~~~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~ 165 (238)
T 1bec_A 103 FGPGTRLTVLEDLRQVTPPKVSLFEP-SKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVH 165 (238)
T ss_dssp ECCCEEEEEESCGGGCBCCEEEEECC-CSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEEC
T ss_pred cCCCEEEEEeccCCCCCCCceEEECC-ChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEECC
Confidence 456788999874 23455543221 11135689999999999877775 4999999998763
No 92
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.57 E-value=3.4e-08 Score=58.48 Aligned_cols=56 Identities=14% Similarity=0.300 Sum_probs=41.3
Q ss_pred cCCCEEEEEEcCC-CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC--ceEEEEECCEEc
Q psy7728 5 YGPRTRLYQFAPP-SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA--AKIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~pP-~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~--~~i~W~~~~~~l 63 (65)
++..+.|+|..++ ..|.|...+. ..+.+|+.++|.|.+.+..|. +.|+|+++++.+
T Consensus 108 ~~~~~~L~V~~~~~~~P~v~~~~~---~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~ 166 (220)
T 2fbj_H 108 WGQGTLVTVSAESARNPTIYPLTL---PPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDI 166 (220)
T ss_dssp ECCCEEEEECSSCCBCCEEEEECC---CSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSC
T ss_pred ecCCEEEEecCCCCCCCEEEEeec---ccccCCCcEEEEEEEEeEECCCcEEEEEecCCEec
Confidence 5677899998643 4456543332 135789999999999887787 899999998643
No 93
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.57 E-value=3.5e-07 Score=52.33 Aligned_cols=52 Identities=19% Similarity=0.314 Sum_probs=39.5
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEE--CCEEc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR--GNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~--~~~~l 63 (65)
...+.|.|..+|. +...+ ....+.+|+.++|.|.+. ++|.+.++||+ +|..+
T Consensus 82 ~~~~~l~V~~~p~---~~~~~--~~~~~~~g~~v~l~C~~~-g~p~p~i~W~~~~~g~~~ 135 (190)
T 2wv3_A 82 KANATIEVKAAPD---ITGHK--RSENKNEGQDAMMYCKSV-GYPHPEWMWRKKENGVFE 135 (190)
T ss_dssp EEEEEEEEECCCE---EEEEC--SEEEEETTSCEEEEEEEE-CSSCCEEEEEEEETTEEE
T ss_pred cccEEEEEecCCc---ccccC--CcceeeCCCcEEEEEEeC-ccCCCceEEEEcCCCcee
Confidence 3457899998874 33222 235789999999999995 57999999999 77764
No 94
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=98.57 E-value=1e-07 Score=54.06 Aligned_cols=53 Identities=19% Similarity=0.413 Sum_probs=37.8
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.|.|..+|. +..........+.+|+.++|.|.+.+ +|.+.++||++|+.+.
T Consensus 88 ~~~l~v~~~p~---~~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~~v~W~~~g~~~~ 140 (189)
T 2v5t_A 88 DIIVIVNVPPA---ISMPQKSFNATAERGEEMTFSCRASG-SPEPAISWFRNGKLIE 140 (189)
T ss_dssp EEEEEEEEEEE---EECSCCEEEEETTSCCCEEEECEEEE-ESCCEEEEEETTEECC
T ss_pred EEEEEecCCCC---cccccccccccccCCCcEEEEEEEcc-CCCCeEEEEECCEECc
Confidence 35666766653 33222222356789999999999964 6999999999998864
No 95
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.56 E-value=8.1e-08 Score=51.72 Aligned_cols=34 Identities=12% Similarity=0.287 Sum_probs=29.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+.+ +|.+.|+|||+|+.+.
T Consensus 16 ~~~v~~G~~v~l~C~~~g-~p~p~i~W~k~~~~~~ 49 (114)
T 2cqv_A 16 DQKVRAGESVELFGKVTG-TQPITCTWMKFRKQIQ 49 (114)
T ss_dssp SEEEETTCCEEEEEEEES-SSSCEEEEEESSSBCC
T ss_pred CeEEeCCCeEEEEEEEEc-CCCCEEEEEECCEECc
Confidence 467899999999999964 8999999999997663
No 96
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.56 E-value=1.3e-07 Score=56.84 Aligned_cols=53 Identities=17% Similarity=0.354 Sum_probs=39.1
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.|.|..+|. +..........+.+|+.++|.|.+. ++|.+.++||++|+.+.
T Consensus 186 ~~~l~v~~~p~---~~~~~~~~~~~~~~g~~v~l~C~~~-g~p~p~i~W~~~g~~~~ 238 (291)
T 1qz1_A 186 DIQVIVNVPPT---VQARQSIVNATANLGQSVTLVCDAD-GFPEPTMSWTKDGEPIE 238 (291)
T ss_dssp EEEEEEEEEEE---EEESCSEEEEETTSCCCEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred EEEEEEecCCc---ccccccccccccccCceEEEEEEEE-EeCCCcEEEEECCEECc
Confidence 45677777763 3333322345788999999999996 47999999999998864
No 97
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.56 E-value=4.6e-08 Score=58.11 Aligned_cols=56 Identities=21% Similarity=0.345 Sum_probs=39.3
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~ 62 (65)
++..+.|+|.. ++..|.+...... ..+.+|+.++|.|.+.+..|.+ .|+|+++++.
T Consensus 115 ~~~~~~L~V~~~~~~~P~i~~~~~~--~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~ 172 (228)
T 3bae_H 115 WGQGTTLTVSSAKTTAPSVYPLAPV--CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 172 (228)
T ss_dssp ECCCEEEEECSCCCBCCEEEEECC-------CCSEEEEEEEEEEEBSSCCEEEEGGGTCC
T ss_pred eCCcEEEEecCCCCCCCEEEEeccc--ccccCCCCEEEEEEEccEeCCCEEEEEeeCCcc
Confidence 45678999985 4555666543311 1357899999999998877887 9999999864
No 98
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.55 E-value=4.4e-08 Score=58.26 Aligned_cols=59 Identities=29% Similarity=0.491 Sum_probs=39.9
Q ss_pred cCCCEEEEEEc---CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFA---PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~---pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
++..+.|+|.. .+..|.+..... ....+.+|+.++|.|.+.+..|++ .|+|+|||+.+.
T Consensus 107 ~~~~~~l~V~~~~~~~~~P~i~~~~~-~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~ 169 (246)
T 4dzb_B 107 FGPGTRLTVLEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 169 (246)
T ss_dssp ECCCEEEEEESCGGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred EcCCEEEEEecCCCcccCCceEeecC-CchhccCCCcEEEEEEEccCcCCceEEEEEECCEECC
Confidence 45678899986 333444433221 112355699999999998766554 899999998864
No 99
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.55 E-value=5.1e-08 Score=55.34 Aligned_cols=34 Identities=21% Similarity=0.694 Sum_probs=29.8
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. +.|.+.|+|||+|+.+.
T Consensus 50 ~~~v~~G~~v~L~C~~~-g~P~p~v~W~k~g~~~~ 83 (154)
T 1fhg_A 50 DMEVVEGSAARFDCKVE-GYPDPEVMWFKDDNPVK 83 (154)
T ss_dssp CEEEETTSCEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred cEEEeCCCeEEEEEEEE-EecCCEEEEEECCEECC
Confidence 36889999999999995 57999999999998864
No 100
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.55 E-value=6.4e-08 Score=50.43 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=29.4
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEECC--EEc
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGN--TEL 63 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~--~~l 63 (65)
..+.+.+|+.++|.|.+. |.|.|.|+|||+| ..+
T Consensus 10 ~~~~v~~G~~~~l~C~~~-g~P~p~i~W~k~~~~~~~ 45 (93)
T 1wit_A 10 RKIKIKAGFTHNLEVDFI-GAPDPTATWTVGDSGAAL 45 (93)
T ss_dssp CEEEECTTBCCEEEEEEE-CCSSCEEEEECSTTTCBC
T ss_pred CceEEeCCCEEEEEEEEE-EcCCCEEEEEECCCCccc
Confidence 356789999999999996 5799999999999 665
No 101
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.55 E-value=8.4e-08 Score=56.30 Aligned_cols=55 Identities=20% Similarity=0.327 Sum_probs=40.8
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNT 61 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~ 61 (65)
++..+.|+|.. ++..|.+...+.. ..+.+|+.++|.|.+.+..|.+ .|+|++++.
T Consensus 110 ~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 110 WGQGTSVTVSSATTTAPSVYPLVPG--CSDTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166 (220)
T ss_dssp ECCCEEEEECSSCCBCCEEEEECCC--SCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred ECCCEEEEEccCCCCCCeEEEcccc--cccCCCCcEEEEEEEEEEeCCCeEEEEecCCc
Confidence 45778999985 4455666543311 1357899999999998777988 999999886
No 102
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.54 E-value=1.5e-07 Score=58.81 Aligned_cols=54 Identities=17% Similarity=0.284 Sum_probs=40.9
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
....+.|+|..+|.. ...+ ....+.+|+.++|.|.+. ++|.+.|+|||||+.+.
T Consensus 296 ~~~~~~l~V~~~p~~---~~~~--~~~~v~~g~~~~l~C~~~-g~p~p~i~W~~~g~~i~ 349 (388)
T 2v5m_A 296 ESVETVLTVTAPLSA---KIDP--PTQTVDFGRPAVFTCQYT-GNPIKTVSWMKDGKAIG 349 (388)
T ss_dssp EEEEEEEEEEEEEEE---EEES--SEEEECTTSCEEEEEEEE-EECCCEEEEEETTEECS
T ss_pred eeEEEEEEEeCCCcc---ccCC--CcEEecCCCCEEEEEEec-cccCCeEEEEECCEECc
Confidence 345678899887642 2222 245789999999999995 57999999999999874
No 103
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.54 E-value=2.2e-07 Score=53.49 Aligned_cols=55 Identities=11% Similarity=0.195 Sum_probs=40.7
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+..+.|.|...+..|.+...+. ..+.+|+.++|.|.+.+ +++.+.|||+|+.+
T Consensus 79 ~~s~~~~l~V~~~~~~p~i~~~p~---~~v~~G~~v~l~C~~~~--~~~~~~w~k~g~~~ 133 (184)
T 2gi7_A 79 LPSDQLELVATGVFAKPSLSAQPG---PAVSSGGDVTLQCQTRY--GFDQFALYKEGDPA 133 (184)
T ss_dssp CCCCCEEEEEESSSCCCEEEEECC---CSSCCTTCEEEEEECSS--CCCEEEEEECCCCT
T ss_pred CCCCCEEEEecCcCCCCEEEeCCC---ceecCCCcEEEEEEcCC--CCcEEEEEECCCcC
Confidence 345678899977665667655442 25789999999999753 34699999999765
No 104
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.54 E-value=2.4e-08 Score=58.87 Aligned_cols=58 Identities=17% Similarity=0.285 Sum_probs=33.8
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
++..+.|+|..++..|.+...+.. ....+|+.++|.|.+.+..|++ .|+|||||+++.
T Consensus 120 ~~~~~~l~V~~~~~~p~v~~~~~~--~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~ 178 (233)
T 3bqu_C 120 FGGGTNLEIKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 178 (233)
T ss_dssp BCCCCBC---CCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----
T ss_pred ecCCEEEEEeCCCCCCEEEEeCCC--HHhhcCCceEEEEEEccccCCceEEEEEECCeeCC
Confidence 345567888875545555442221 1234699999999998766664 899999998753
No 105
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.54 E-value=5.9e-08 Score=57.76 Aligned_cols=57 Identities=21% Similarity=0.312 Sum_probs=36.9
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEc
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l 63 (65)
++..+.|+|.. ++..|.+...... ..+.+|+.++|.|.+.+..|.+ .|+|+|+|+.+
T Consensus 106 ~~~~~~L~V~~~~~~~P~v~~~~~~--~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~ 164 (227)
T 1mju_H 106 WGQGTLVTVSAAKTTAPSVYPLAPV--CGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 164 (227)
T ss_dssp ECCCEEEEECSSCCBCCEEEEECCC--C------CEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred EcCcEEEEEcCCCCCCCEEEEecCC--ccccCCCcEEEEEEeecEeCCCeEEEEecCCCcC
Confidence 45678999986 4455565432211 1356899999999998777877 99999998753
No 106
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=1.2e-07 Score=50.62 Aligned_cols=34 Identities=26% Similarity=0.650 Sum_probs=29.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. +.|.+.|+|||+++.+.
T Consensus 17 ~~~v~~G~~v~l~C~~~-g~p~p~v~W~k~g~~~~ 50 (110)
T 2dm2_A 17 HYKIFEGMPVTFTCRVA-GNPKPKIYWFKDGKQIS 50 (110)
T ss_dssp CEEEETTCCEEEEEEBC-CSSCCEEEEECSSCBCC
T ss_pred CeEEeCCCeEEEEEEEE-ecCCCEEEEEECCEECC
Confidence 45789999999999995 57999999999998764
No 107
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.54 E-value=1.3e-07 Score=51.27 Aligned_cols=35 Identities=20% Similarity=0.471 Sum_probs=30.7
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+.+|+.++|.|.+. ++|.+.|+|||+|+.+.
T Consensus 32 ~~~~v~~G~~~~l~C~~~-g~P~p~i~W~k~g~~l~ 66 (118)
T 2e7c_A 32 QTYIRKVGEQLNLVVPFQ-GKPRPQVVWTKGGAPLD 66 (118)
T ss_dssp SCEEEESSSCEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred CCEEEECCCEEEEEEEEc-cCCCCEEEEEECCEECC
Confidence 457889999999999985 57999999999998874
No 108
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=98.54 E-value=1.2e-07 Score=57.03 Aligned_cols=55 Identities=20% Similarity=0.478 Sum_probs=41.1
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
....+.|+|..+|.. .... .....+.+|+.++|.|.+. +.|.+.++|||+++.+.
T Consensus 87 ~~~~~~l~V~~~p~~---~~~~-~~~~~v~~g~~~~l~C~~~-g~p~~~v~W~~~~~~~~ 141 (284)
T 2rik_A 87 DSCSAQLGVQEPPRF---IKKL-EPSRIVKQDEHTRYECKIG-GSPEIKVLWYKDETEIQ 141 (284)
T ss_dssp EEEEEEEEEECCCEE---EECC-CSEEEEETTCCEEEEEEEE-SSSCCEEEEEETTEECC
T ss_pred EEEEEEEEccCCCcc---cccC-CCceEecCCceEEEEEEEe-eeCCCEEEEEECCEECc
Confidence 345678999988743 2111 2234688999999999996 46999999999998764
No 109
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.53 E-value=8.7e-08 Score=50.26 Aligned_cols=35 Identities=14% Similarity=0.453 Sum_probs=30.0
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+.+|+.++|.|.+. +.|.+.|+|||+|..+.
T Consensus 16 ~~~~v~~G~~v~l~C~~~-g~p~p~v~W~~~~~~~~ 50 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAG-GNPMPTMRWLKNGKEFK 50 (100)
T ss_dssp CEEEECTTCCEEEECCEE-EESCCEEEEEETTEECC
T ss_pred cEEEecCCCEEEEEEEcc-ccCCCEEEEEECCEEcc
Confidence 346789999999999995 57999999999998764
No 110
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.53 E-value=2e-07 Score=55.22 Aligned_cols=34 Identities=32% Similarity=0.676 Sum_probs=29.8
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+|+.++|.|.+.+..|.+.|+|||||+++.
T Consensus 126 ~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~ 159 (207)
T 3rbs_A 126 WEVTGECNVLLKCKVANIKKETHIVWYKDEREIS 159 (207)
T ss_dssp EEEETTTEEEEEEEEESCCTTCEEEEEETTEEEC
T ss_pred cEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECC
Confidence 4688999999999997655999999999999873
No 111
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.53 E-value=3.5e-07 Score=55.56 Aligned_cols=55 Identities=11% Similarity=0.145 Sum_probs=41.4
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
+.+..+.|.|...+..|.+...+. ..+.+|+.++|.|.+.+ +++.+.|||+|+.+
T Consensus 87 ~~S~~~~L~V~~~~~~P~i~~~p~---~~v~~G~~vtL~C~~~~--~~~~~~w~k~g~~~ 141 (242)
T 1p6f_A 87 EPSNLLDLVVTEMYDTPTLSVHPG---PEVISGEKVTFYCRLDT--ATSMFLLLKEGRSS 141 (242)
T ss_dssp CCCCCEEEEEECCSCCCEEEEESC---SEEETTCEEEEEEECTT--SCSEEEEEECSSSC
T ss_pred cCCcceEEEeecccCCCceEccCC---CccCCCCcEEEEEecCC--CCCEEEEEECCCcc
Confidence 456778999987655667765443 25789999999999864 35699999998643
No 112
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.53 E-value=7.5e-08 Score=51.99 Aligned_cols=34 Identities=24% Similarity=0.711 Sum_probs=29.6
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. |.|.+.|+|||+++.+.
T Consensus 18 ~~~v~~G~~v~L~C~~~-g~P~p~v~W~k~~~~~~ 51 (117)
T 2v9t_A 18 DLIVSKGEPATLNCKAE-GRPTPTIEWYKGGERVE 51 (117)
T ss_dssp CEEECTTCCEEECCEEE-EESCCEEEEEETTEECC
T ss_pred CEEEcCCCcEEEEEECC-ccCCCeEEEEECCEecc
Confidence 35789999999999995 57999999999998764
No 113
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.53 E-value=7.9e-08 Score=56.60 Aligned_cols=56 Identities=21% Similarity=0.391 Sum_probs=40.6
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~ 62 (65)
++..+.|+|.. +|..|.|....... .+.+|+.++|.|.+.+..|.+ .|+|+++|+.
T Consensus 107 ~~~~~~L~V~~~~~~~P~i~~~~~~~--~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 164 (215)
T 1c5d_H 107 WGPGTMVTVSSAQTTAPSVYPLAPGC--GDTTSSTVTLGCLVKGYFPEPVTVTWNSGALS 164 (215)
T ss_dssp BCCCEEEEECSSCCBCCCEEEECCCS--SCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTC
T ss_pred EcCCEEEEecCCCCCCCeEEeccCCh--hhccCCcEEEEEEEeeeEcCCcEEEEccCCcc
Confidence 45678999984 45555554322111 257899999999998877887 9999999864
No 114
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.52 E-value=2.2e-07 Score=57.06 Aligned_cols=55 Identities=9% Similarity=0.082 Sum_probs=42.6
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+..+.|.|...+.+|.+...+.. .+.+|++++|.|.+.+ +++.+.|||||+.+
T Consensus 92 ~~S~~~~L~V~~~~~~P~l~~~p~~---~V~~G~~vtL~C~~~~--~~~~~~w~k~g~~~ 146 (257)
T 1b6u_A 92 APSDPLDIVITGLYEKPSLSAQPGP---TVLAGESVTLSCSSRS--SYDMYHLSREGEAH 146 (257)
T ss_dssp CCCCCEEEEEECSSCCCEEECSSCT---TCBTTCEEEEEEECSS--CCSEEEEEETTSSC
T ss_pred ccCCCEEEecccCCCCcceEccCCC---ccCCCCEEEEEEeCCC--CCcEEEEEECCccc
Confidence 4567789999987777888755432 5789999999999864 34699999998653
No 115
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.52 E-value=5.7e-07 Score=47.17 Aligned_cols=43 Identities=14% Similarity=0.392 Sum_probs=32.6
Q ss_pred cEEEeCCCCCeEEeecCCcEEEEEEecCC-CCCceEEEEECCEEcc
Q psy7728 20 IEIVGHPSNSKIEIRENQEITLECLVKNA-KPAAKIVWYRGNTELK 64 (65)
Q Consensus 20 ~~i~~~~~~~~~~~~~G~~~~L~C~~~~~-~P~~~i~W~~~~~~l~ 64 (65)
|.|...+ ....+.+|+.++|.|.+.+. .|.+.++|||+++.+.
T Consensus 11 P~i~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~ 54 (112)
T 3so5_A 11 PQITVQP--ETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQ 54 (112)
T ss_dssp CEEEECC--CCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECT
T ss_pred CeEEeCC--CCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccc
Confidence 3454433 23578999999999999754 5678999999998764
No 116
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=98.52 E-value=9.4e-08 Score=55.24 Aligned_cols=50 Identities=18% Similarity=0.240 Sum_probs=39.8
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
...+.|.|..+|..|.+.. ....+|+.++|.|.+. ++|.+.|+|++++..
T Consensus 94 ~~~~~l~V~~~~~~p~~~~------~~~~~g~~v~l~C~~~-g~P~p~v~W~~~~~~ 143 (202)
T 3bp6_B 94 YKYLTVKVKASYMRIDTRI------LEVPGTGEVQLTCQAR-GYPLAEVSWQNVSVP 143 (202)
T ss_dssp EEEEEEEEEBCCCCEEEEE------EECTTTCCEEEEEEEE-EBSCCEEEETTCCSC
T ss_pred eEEEEEEecCCCCcccEEE------EecCCCCeEEEEEEcc-ccCCceEEEEeCCCC
Confidence 3467889998887776643 2457899999999995 489999999998754
No 117
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.52 E-value=1.7e-07 Score=48.83 Aligned_cols=34 Identities=6% Similarity=0.322 Sum_probs=29.3
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. +.|.+.|.|||+|+.+.
T Consensus 15 ~~~v~~G~~~~l~C~~~-g~p~p~v~W~~~g~~~~ 48 (99)
T 3puc_A 15 DTTVSSDSVAKFAVKAT-GEPRPTAIWTKDGKAIT 48 (99)
T ss_dssp CEEEESSSCEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred cEEEeCCCcEEEEEEEE-ecCCCEEEEEECCEECc
Confidence 35789999999999995 47899999999998763
No 118
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.52 E-value=2.2e-07 Score=50.58 Aligned_cols=34 Identities=29% Similarity=0.646 Sum_probs=29.8
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. +.|.+.|.|||+++.+.
T Consensus 24 ~~~v~~G~~v~L~C~~~-g~p~p~v~W~k~~~~~~ 57 (116)
T 2kkq_A 24 SKKVLEGDSVKLECQIS-AIPPPKLFWKRNNEMVQ 57 (116)
T ss_dssp CEEEETTEEEEEEEEBC-CBSCCEEEEEETTEECC
T ss_pred cEEEeCCCcEEEEEEEe-ccCCCEEEEEECCEECc
Confidence 46889999999999985 57999999999998864
No 119
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.51 E-value=1.3e-07 Score=53.75 Aligned_cols=56 Identities=20% Similarity=0.363 Sum_probs=39.9
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.|.|..+|... ..........+.+|+.++|.|.+. ++|.+.++||+++..+.
T Consensus 90 ~~~~~l~v~~~p~~~--~~~~~~~~~~~~~g~~~~l~C~~~-~~p~p~v~W~~~~~~~~ 145 (197)
T 3lcy_A 90 ETSSKLLLQATPQFH--PGYPLKEKYYGAVGSTLRLHVMYI-GRPVPAMTWFHGQKLLQ 145 (197)
T ss_dssp EEEEEEEEEEEEEEC--TTSCCCSEEEEETTSCEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred eEEEEEEEEcCCCCC--CCccCCcceeecCCCeEEEEEEEe-eeeCCeeEEeECCEECC
Confidence 345677887765321 111223456788999999999986 58999999999998864
No 120
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.51 E-value=1.4e-07 Score=50.03 Aligned_cols=33 Identities=21% Similarity=0.516 Sum_probs=28.4
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+.+ |.+.|+|||||+.+.
T Consensus 16 ~~~v~~G~~v~l~C~~~~--~~~~v~W~k~g~~l~ 48 (103)
T 1x44_A 16 DTTAYCGERVELECEVSE--DDANVKWFKNGEEII 48 (103)
T ss_dssp CEEEETTEEEEEEEECSS--SSCCCEEEETTEECC
T ss_pred CEEEECCCCEEEEEEecC--CCCeEEEEECCEECC
Confidence 357889999999999954 779999999999874
No 121
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.51 E-value=3.6e-07 Score=48.88 Aligned_cols=33 Identities=18% Similarity=0.434 Sum_probs=28.6
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. .|.+.+.|||||+.+.
T Consensus 22 ~~~~~~G~~v~L~C~~~--~p~~~v~W~k~g~~~~ 54 (113)
T 2cpc_A 22 YVAAVRLERVVLTCELC--RPWAEVRWTKDGEEVV 54 (113)
T ss_dssp EEEEETTCCEEEEEEES--CTTCCCEEEETTEECC
T ss_pred eEEEEcCCeEEEEEEec--CCCCeEEEEECCEECc
Confidence 35788999999999983 7899999999998864
No 122
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=1.4e-07 Score=50.47 Aligned_cols=32 Identities=16% Similarity=0.357 Sum_probs=28.3
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+ .|.+.|+|||||+++.
T Consensus 16 ~~~v~~G~~v~l~C~v---~p~p~v~W~k~g~~l~ 47 (100)
T 2yuz_A 16 DQTVNLGKEICLKCEI---SENIPGKWTKNGLPVQ 47 (100)
T ss_dssp CEEEETTSCCCEEEEC---SSCCCEEEEETTEECC
T ss_pred ceEEcCCCCEEEEEEe---CCCCeEEEEECCEECC
Confidence 3578999999999998 6889999999999874
No 123
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.50 E-value=3.2e-07 Score=52.26 Aligned_cols=52 Identities=19% Similarity=0.342 Sum_probs=37.6
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
...+.|.|..+|. +.... ....+.+|+.++|.|.+. +.|.+.++|||++..+
T Consensus 86 ~~~~~l~v~~~p~---~~~~~--~~~~~~~g~~~~l~C~~~-g~p~p~v~W~~~~~~~ 137 (189)
T 2v44_A 86 EATVVLEIYQKLT---FREVV--SPQEFKQGEDAEVVCRVS-SSPAPAVSWLYHNEEV 137 (189)
T ss_dssp EEEEEEEEECCCE---EESCC--CSEEEETTSCEEECCEEE-CSSCCEEEEEEEC--C
T ss_pred EEEEEEEEecCCc---eeecC--CcEEEeCCCCEEEEEEEC-cCCCCcEEEEECCcEE
Confidence 3457788888773 22212 235788999999999996 5799999999999875
No 124
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=98.50 E-value=3.8e-08 Score=58.53 Aligned_cols=52 Identities=17% Similarity=0.295 Sum_probs=35.5
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
....+.|+|..||.. ...+ ....+.+|+.++|.|.+. |.|.|.|+|++++..
T Consensus 95 ~~~~~~l~V~~p~~~---~~~~--~~~~v~~g~~~~l~C~~~-G~P~P~v~W~~~~~~ 146 (203)
T 4fa8_A 95 VTKQEHLSVVKPLTL---SVHS--ERSQFPDFSVLTVTCTVN-AFPHPHVQWLMPEGV 146 (203)
T ss_dssp EEEEEEEEEEEEEEE---EEEE--EECCSSCSCCEEEEEEEE-EESCCEEEECCC---
T ss_pred EEEEEEEEecCCcee---eecc--eeEEEcCCCEEEEEEEcC-CCCCCEEEEEECCee
Confidence 344578888877632 2111 123578999999999996 489999999987643
No 125
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.50 E-value=2e-07 Score=49.28 Aligned_cols=34 Identities=26% Similarity=0.668 Sum_probs=29.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. +.|.+.|+|||+|+.+.
T Consensus 22 ~~~v~~G~~v~l~C~~~-g~p~p~i~W~~~~~~~~ 55 (107)
T 3irg_B 22 PVRVVSGAEAELKCVVL-GEPPPVVVWEKGGQQLA 55 (107)
T ss_dssp CEEEETTSCEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred cEEEeCCCeEEEEEEEe-ecCCCEEEEEECCeECC
Confidence 46789999999999994 57899999999998763
No 126
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.50 E-value=2.6e-07 Score=52.42 Aligned_cols=43 Identities=19% Similarity=0.434 Sum_probs=33.2
Q ss_pred EEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 21 EIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 21 ~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.|.....+..+.+.+|+.++|.|.+. +.|.+.++|||+|+.+.
T Consensus 4 ~i~~~~~~~~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~ 46 (192)
T 2va4_A 4 AISMPQKSFNATAERGEEMTFSCRAS-GSPEPAISWFRNGKLIE 46 (192)
T ss_dssp EEECSCCEEEEETTSCCCEEEECEEE-CSSCCEEEEEETTEECC
T ss_pred cccCCCCCcEEEEecCCCEEEEEeec-cCCCCeEEEEECCeEcC
Confidence 44443333346789999999999985 46899999999998764
No 127
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.49 E-value=7.8e-08 Score=57.07 Aligned_cols=60 Identities=28% Similarity=0.492 Sum_probs=41.3
Q ss_pred ccCCCEEEEEEc---CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 4 RYGPRTRLYQFA---PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 4 ~~~~~~~L~V~~---pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
.++..+.|+|.. .+..|.+..... ....+.+|+.++|.|.+.+..|++ .++|+|||+++.
T Consensus 103 ~~~~~~~l~V~~~~~~~~~p~~~~~~~-~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~ 166 (240)
T 3q5y_A 103 YFGPGTRLTVLEDLRNVTPPKVSLFEP-SKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVH 166 (240)
T ss_dssp EECCCEEEEEESCGGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred EEcCCEEEEEeccccCCCCCeeEEeCC-chhhcccCCceEEEEEEeeEECCCeEEEEEECCEECc
Confidence 356678899984 334445543221 112355689999999998877766 899999999863
No 128
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.49 E-value=1.2e-07 Score=50.84 Aligned_cols=30 Identities=17% Similarity=0.434 Sum_probs=25.6
Q ss_pred ecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..|..+.|.|.+. |+|.|.|+|||||+++.
T Consensus 14 ~~~~~~~~~c~v~-G~P~P~i~W~k~g~~l~ 43 (103)
T 1wwb_X 14 TSDHHWCIPFTVK-GNPKPALQWFYNGAILN 43 (103)
T ss_dssp CCCCEEEEEEEEE-CSSCCEEEEEETTEEEC
T ss_pred eECcEEEEEEEEE-EeCCCEEEEEECCEECC
Confidence 4577889999995 58999999999999874
No 129
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.48 E-value=8.8e-08 Score=56.91 Aligned_cols=60 Identities=28% Similarity=0.465 Sum_probs=40.3
Q ss_pred ccCCCEEEEEEc---CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 4 RYGPRTRLYQFA---PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 4 ~~~~~~~L~V~~---pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
.++..+.|+|.. .+..|.+..... ....+.+|+.++|.|.+.+..|++ .|+|+|||+.+.
T Consensus 105 ~~~~~~~l~V~~~~~~~~~p~~~~~~~-~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~ 168 (245)
T 4ei6_B 105 FFGPGTRLTVLEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 168 (245)
T ss_dssp EECCCEEEEEESCGGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred EEcCCcEEEEecccCCCCCceEEEeCC-CcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECC
Confidence 456778899985 122334432211 112355699999999998877765 899999998864
No 130
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.48 E-value=2.1e-07 Score=58.11 Aligned_cols=54 Identities=15% Similarity=0.313 Sum_probs=41.0
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
....+.|+|..+| .+...+ ....+.+|+.++|.|.+. ++|.+.|+|||||+.+.
T Consensus 301 ~~~~~~l~V~~~p---~~~~~~--~~~~v~~g~~~~l~C~~~-g~p~p~v~W~~~g~~~~ 354 (404)
T 3p3y_A 301 IRHTISVRVKAAP---YWLDEP--KNLILAPGEDGRLVCRAN-GNPKPTVQWMVNGEPLQ 354 (404)
T ss_dssp EEEEEEEEEEEEE---EEEECC--CCEEECTTCCEEEECEEE-EESCCEEEEEETTEEGG
T ss_pred EEEEEEEEEeCCC---eeeccC--CcceeecCCcEEEEEEcc-ccCCCceEEEECCEecC
Confidence 3446788888876 333322 235788999999999995 47999999999999874
No 131
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=98.47 E-value=8.4e-08 Score=57.27 Aligned_cols=58 Identities=17% Similarity=0.309 Sum_probs=39.6
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
++..+.|.|..++..|.+...... ....+|+.++|.|.+.+..|+ +.|+|||||+++.
T Consensus 140 ~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 198 (254)
T 2c1o_A 140 FGAGTKLELKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 198 (254)
T ss_dssp EBCCEEEEECCCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEEC
T ss_pred ecCCEEEEECCCCCCCeeEeecCC--hhhccCCcEEEEEEEecccCCCcEEEEEECCCccc
Confidence 455678888765445555442221 123467899999999876666 5799999998763
No 132
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.47 E-value=6e-08 Score=58.52 Aligned_cols=60 Identities=28% Similarity=0.473 Sum_probs=40.3
Q ss_pred ccCCCEEEEEEc---CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 4 RYGPRTRLYQFA---PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 4 ~~~~~~~L~V~~---pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
.++..+.|+|.. .+..|.+..... ....+.+|+.++|.|.+.+..|++ .|+|+|||+++.
T Consensus 127 ~~~~~~~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~ 190 (268)
T 3pl6_D 127 YFGPGTRLTVLEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 190 (268)
T ss_dssp EECCCEEEEEESCGGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEEC
T ss_pred eeCCcEEEEEecCcccccCCceEEeCC-CcccccCCCceEEEEEECcccCCCeEEEEEECCEECC
Confidence 356678899986 222344432221 112355699999999998766655 899999998763
No 133
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.47 E-value=7.1e-08 Score=57.41 Aligned_cols=59 Identities=24% Similarity=0.388 Sum_probs=39.6
Q ss_pred cCCCEEEEEEc---CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFA---PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~---pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
++..+.|+|.. .+..|.+..... ....+.+|+.++|.|.+.+..|++ .++|+|||+.+.
T Consensus 106 ~~~~~~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~ 168 (245)
T 3nfj_J 106 FGEGSWLTVVEDLNKVFPPEVAVFEP-SEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVH 168 (245)
T ss_dssp ECCCEEEEEESCGGGCBCCEEEEEEC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred ECCCeEEEEEcccCCCCCCceEeecC-CcccccCCCceEEEEEEccCcCCCEEEEEEECCEECC
Confidence 45678899987 333444432211 011245599999999998866655 899999999863
No 134
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.47 E-value=8.3e-08 Score=56.44 Aligned_cols=56 Identities=20% Similarity=0.385 Sum_probs=40.2
Q ss_pred cCCCEEEEEE-cCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC--ceEEEEECCEEc
Q psy7728 5 YGPRTRLYQF-APPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA--AKIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~-~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~--~~i~W~~~~~~l 63 (65)
++..+.|+|. .++..|.+....... . .+|+.++|.|.+.+..|. +.|+|+++|+.+
T Consensus 109 ~~~~~~l~V~~~~~~~p~v~~~~~~~--~-~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~ 167 (221)
T 3m8o_H 109 WGQGTLVTVSSASPTSPKVFPLSLCS--T-QPDGNVVIACLVQGFFPQEPLSVTWSESGQGV 167 (221)
T ss_dssp BBCCEEEEECSCCCBCCEEEEEECCS--C-CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTC
T ss_pred ECCCEEEEEecCCCCCCeEEEecCcc--c-ccCCCEEEEEEEEeeECCCCEEEEEEECCEEC
Confidence 5677899998 455556664211111 1 689999999999887776 599999998654
No 135
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.47 E-value=4.9e-07 Score=50.80 Aligned_cols=44 Identities=16% Similarity=0.369 Sum_probs=32.7
Q ss_pred ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 19 SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 19 ~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+|.+...+. ...+.+|+.++|.|.+.+..+.+.++|||+|+.+.
T Consensus 4 ~p~i~~~p~--~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~ 47 (170)
T 3ry4_A 4 KAVLKLEPP--WINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIP 47 (170)
T ss_dssp BCEEEEESC--CSEEETTCEEEEEEESCCCSSSSCEEEEETTEECT
T ss_pred CCEEEeCCC--CeEEECCCcEEEEEEecCCCCcceEEEEECCeEcc
Confidence 345544332 23588999999999997654478999999999874
No 136
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.47 E-value=7.6e-08 Score=58.22 Aligned_cols=59 Identities=29% Similarity=0.501 Sum_probs=39.9
Q ss_pred cCCCEEEEEEc---CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFA---PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~---pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
++..+.|+|.. .+..|.+..... ....+.+|+.++|.|.+.+..|.+ .|+|+|||+++.
T Consensus 131 ~~~~~~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~ 193 (270)
T 3qib_D 131 FGPGTRLLVLEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 193 (270)
T ss_dssp ECCCEEEEEESCSTTCBCCEEEEEEC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred ECCcEEEEEccccccccCCceEEECC-CccccccCCceEEEEEecceeCCCeEEEEEECCEECC
Confidence 45678899987 222344332111 011245699999999998877876 899999999873
No 137
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.46 E-value=2e-07 Score=51.61 Aligned_cols=31 Identities=13% Similarity=0.387 Sum_probs=27.5
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+|+.++|.|.+.+ .+.++|||||++|.
T Consensus 18 ~~v~eG~~a~f~C~vs~---~p~v~W~knG~~l~ 48 (112)
T 2e6q_A 18 VQVYDGEDAVFSLDLST---IIQGTWFLNGEELK 48 (112)
T ss_dssp EEEETTCEEEEEEEESS---CCCCEEEESSCBCC
T ss_pred eEEcCCCcEEEEEEECC---CCeEEEEECCEECc
Confidence 67999999999999964 67899999999875
No 138
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.46 E-value=8.6e-08 Score=57.44 Aligned_cols=54 Identities=28% Similarity=0.386 Sum_probs=38.1
Q ss_pred cCCCEEEEEEcCCC------ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEECCE
Q psy7728 5 YGPRTRLYQFAPPS------SIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYRGNT 61 (65)
Q Consensus 5 ~~~~~~L~V~~pP~------~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~ 61 (65)
++..+.|+|...|. .+.+.. +. ...+.+|+.++|.|.+.+..|. +.|+|++++.
T Consensus 113 ~~~~~~L~V~~~~~~~~~~p~~~v~~-p~--~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 173 (242)
T 1hxm_B 113 FGPGTKLIITDKQLDADVSPKPTIFL-PS--IAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKS 173 (242)
T ss_dssp ECCCEEEEEESSCCCSCCSCBCCCCC-CC--GGGGGSSSCEEEEEEEEEESSCCEEEEEEESSS
T ss_pred EcCcEEEEEcccccCCCcCCCceEEC-CC--hhhcccCCCceEEEEEeeEECCCeEEEEEcCCC
Confidence 46678999997532 223322 11 1135679999999999877785 7999999986
No 139
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.46 E-value=2.8e-07 Score=57.53 Aligned_cols=52 Identities=25% Similarity=0.533 Sum_probs=40.8
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.|+|..+|. +...+. ....+.+|+.++|.|.+. ++|.+.|+|||||+++.
T Consensus 300 ~~~l~V~~~P~---~~~~~~-~~~~~~~g~~~~l~C~~~-g~p~p~v~W~~~g~~~~ 351 (395)
T 1bih_A 300 SLKLTVVSAPK---YEQKPE-KVIVVKQGQDVTIPCKVT-GLPAPNVVWSHNAKPLS 351 (395)
T ss_dssp EEEEEEEEEEE---EEECCC-SEEEECTTSCEEEECEEE-EESCCCCEEEETTEECC
T ss_pred EEEEEEEcCCc---cccCCC-cceEecCCCeEEEEEEEC-cccCCeeEEEECCEECC
Confidence 67899988773 433332 236789999999999996 57999999999999874
No 140
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.46 E-value=1.5e-07 Score=50.96 Aligned_cols=34 Identities=15% Similarity=0.475 Sum_probs=29.3
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. ++|.+.|+|||||+.+.
T Consensus 17 ~~~v~~G~~v~l~C~~~-g~p~p~i~W~k~g~~~~ 50 (118)
T 2eo9_A 17 NQTVAVDGTFVLSCVAT-GSPVPTILWRKDGVLVS 50 (118)
T ss_dssp CEEEETTCEEEEECBCC-CSSCCEEEEEESSSBCC
T ss_pred CEEEcCCCeEEEEEEEE-ecCCCEEEEEECCEECc
Confidence 46789999999999994 58999999999997663
No 141
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.46 E-value=2.4e-07 Score=58.51 Aligned_cols=53 Identities=19% Similarity=0.379 Sum_probs=40.2
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...++|+|..+|.. .... ....+.+|+.++|.|.+. |.|.+.|+|||||+++.
T Consensus 285 ~~~~~l~v~~~P~~---~~~~--~~~~v~~g~~v~l~C~~~-g~P~p~i~W~k~g~~l~ 337 (384)
T 3kld_A 285 VAKGQLTFYAQPNW---VQII--NDIHVAMEESVFWECKAN-GRPKPTYRWLKNGDPLL 337 (384)
T ss_dssp EEEEEEEEEEEEEE---EECC--CCEEECTTCCEEEECEEE-EESCCEEEEEETTEECC
T ss_pred EEEEEEEEecCCcc---ccCC--CceEecCCCCEEEEeECC-ccCCCeEEEEECCEECC
Confidence 34578889887742 2222 235789999999999995 57999999999999863
No 142
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=98.45 E-value=9.2e-07 Score=50.51 Aligned_cols=34 Identities=29% Similarity=0.652 Sum_probs=29.7
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. +.|.+.|+|||+|+++.
T Consensus 13 ~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~ 46 (197)
T 2j8h_A 13 NLNVRYQSNATLVCKVT-GHPKPIVKWYRQGKEII 46 (197)
T ss_dssp CEEEETTSCEEEEEEEE-CSSCCEEEEEETTEECC
T ss_pred ccEEcCCCEEEEEEEEe-ecCCCEEEEEECCEECc
Confidence 46789999999999996 57999999999998763
No 143
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.45 E-value=4.9e-07 Score=58.85 Aligned_cols=57 Identities=19% Similarity=0.452 Sum_probs=39.4
Q ss_pred cCCCEEEEEEcCC-CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEECCEEc
Q psy7728 5 YGPRTRLYQFAPP-SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~pP-~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l 63 (65)
++..+.|+|...+ ..|.+...+. ...+.+|+.++|.|.+.+..|+ +.|+|||||+++
T Consensus 99 ~~~~~~l~V~~~~~~~P~~~~~~~--~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l 157 (523)
T 2rcj_C 99 FGTGTKVTVLGQPKANPTVTLFPP--SSEELQANKATLVCLISDFYPGAVTVAWKADGSPV 157 (523)
T ss_pred ccCceEEEeccCCCcCCeEEecCC--cccccCCCceEEEEEeccccCCceEEEEecCCCCC
Confidence 4567899996433 2344443332 1245689999999999876554 499999999876
No 144
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.45 E-value=1.1e-07 Score=57.25 Aligned_cols=59 Identities=29% Similarity=0.473 Sum_probs=40.4
Q ss_pred cCCCEEEEEEcC---CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAP---PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~p---P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
++..+.|+|... +..|.+..... ....+.+|+.++|.|.+.+..|+ +.|+|+|||+++.
T Consensus 105 ~~~~~~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~ 167 (252)
T 1oga_E 105 FGPGTRLTVTEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 167 (252)
T ss_dssp ECCCEEEEEESCGGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred ECCCEEEEEecccCCCCCCeEEEECC-ChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECC
Confidence 456788999852 23445543221 11124478999999999887776 5999999998763
No 145
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.45 E-value=1e-07 Score=59.46 Aligned_cols=57 Identities=19% Similarity=0.306 Sum_probs=41.4
Q ss_pred ccCCCEEEEEE-cCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEECCEE
Q psy7728 4 RYGPRTRLYQF-APPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYRGNTE 62 (65)
Q Consensus 4 ~~~~~~~L~V~-~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~ 62 (65)
.++..+.|+|. .++..|.+...... ..+.+|+.++|.|.+.++.|. +.|+|+|+|+.
T Consensus 104 ~~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~ 162 (344)
T 1za6_B 104 YWGQGTLVTVSSASTKGPSVFPLAPS--SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 162 (344)
T ss_dssp EECCCEEEEECSSCCBCCEEEEECCS--CTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBC
T ss_pred eecCcEEEEEecCCCCCCeEEEcccc--ccccCCCcEEEEEEEeeEECCCeEEEEecCCcc
Confidence 35667899998 45555666533211 135799999999999877675 79999999865
No 146
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.45 E-value=9.2e-08 Score=56.92 Aligned_cols=50 Identities=20% Similarity=0.258 Sum_probs=32.3
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCE
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNT 61 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~ 61 (65)
...+.|+|..+|.. .+. +. .....|..++|.|.+.++.|.+ .|+|||||+
T Consensus 109 ~~~~~L~V~~~P~v-~~~--~~---~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~ 159 (248)
T 3pv7_A 109 QGTVQLEVVASPAS-RLL--LD---QVGMKENEDKYMCESSGFYPEAINITWEKQTQ 159 (248)
T ss_dssp EEEEEEEEEBCCEE-EEE--CC-----------CEEEEEEEEEBSSCCEEEEEEECS
T ss_pred eeEEEEEEecCCce-EEe--cC---CccccCCCcEEEEEEccEECCCeEEEEEECCc
Confidence 34678999987753 222 22 1345678888999998878998 999999985
No 147
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.44 E-value=2.6e-07 Score=49.73 Aligned_cols=33 Identities=18% Similarity=0.469 Sum_probs=28.7
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+ +.|.+.|+|||||+++.
T Consensus 25 ~~~v~~G~~v~L~C~~--~~p~~~v~W~k~g~~l~ 57 (104)
T 1pd6_A 25 AYQVSKGHKIRLTVEL--ADHDAEVKWLKNGQEIQ 57 (104)
T ss_dssp EEEEETTSCEEEEEEC--SSSSSCCEEEESSSEEC
T ss_pred cEEEecCCCEEEEEEE--cCCCCEEEEEECCEECC
Confidence 3578999999999998 47889999999998764
No 148
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.44 E-value=6.9e-08 Score=58.87 Aligned_cols=55 Identities=24% Similarity=0.346 Sum_probs=41.3
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
...+.+.|.++|..+.+..... +...+|+.++|.|.+.+++|++.|+||++++++
T Consensus 102 ~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~ 156 (308)
T 4fom_A 102 QSSTTVTVLVEPTVSLIKGPDS---LIDGGNETVAAICIAATGKPVAHIDWEGDLGEM 156 (308)
T ss_dssp EEEEEEEEEBCCEEEEEECSSC---CCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBC
T ss_pred eeeeEEEeeeccccccccccce---eEEcCCceEEEEEEecCCcCCceEEEEECCccc
Confidence 3456788888876655543222 345678999999998888999999999998765
No 149
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.44 E-value=1.7e-07 Score=49.12 Aligned_cols=33 Identities=18% Similarity=0.517 Sum_probs=28.7
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+ +.|.+.+.|||||+.+.
T Consensus 17 ~~~v~~G~~v~l~C~~--~~p~~~v~W~k~~~~l~ 49 (95)
T 2k1m_A 17 SVEVAAGSPAVFEAET--ERAGVKVRWQRGGSDIS 49 (95)
T ss_dssp CEEEETTSCEEEEEEC--SSSSCCCEEECSSSEEC
T ss_pred cEEEeCCCcEEEEEEe--CCCCCeEEEEECCEECC
Confidence 4678999999999998 57899999999998763
No 150
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.44 E-value=3.4e-07 Score=54.23 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=31.0
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+.+.+|..+.|.|.+..+.|.+.|+|||||+++.
T Consensus 12 ~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~ 45 (207)
T 3rbs_A 12 VEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIF 45 (207)
T ss_dssp EEECGGGCEEEEEECSCCCSCCEEEEEETTEEEC
T ss_pred eEEEeCCeEEEEEEEecCCCCCEEEEEECCEECc
Confidence 5789999999999998778999999999999873
No 151
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.43 E-value=2.8e-07 Score=61.38 Aligned_cols=54 Identities=17% Similarity=0.193 Sum_probs=39.3
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.|+|+.+| .+...+....+.+.+|+.+.|.|.+. ++|+|.|+|||||+++.
T Consensus 315 ~~~~L~V~~~p---~i~~~~~~~~~~v~~G~~v~L~C~~~-g~P~p~i~W~k~g~~l~ 368 (527)
T 3qs9_E 315 QSALVTIVEKG---FINATNSSEDYEIDQYEEFCFSVRFK-AYPQIRCTWTFSRKSFP 368 (527)
T ss_dssp EEEEEEEC--C---EEECCCSCCEECCCTTCCCCEEEEEE-EESCCEEEEEETTEEEE
T ss_pred ceEEEEEEccC---ccccccCcccEEEcCCCeEEEEEEEE-ecCCCEEEEEECCEECc
Confidence 35778888776 34333333346788999999999995 57999999999999873
No 152
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.43 E-value=1.5e-07 Score=49.65 Aligned_cols=33 Identities=21% Similarity=0.614 Sum_probs=29.1
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. .|.+.|+|||||+.+.
T Consensus 20 ~~~v~~G~~v~L~C~~~--~p~~~v~W~k~g~~~~ 52 (102)
T 2eo1_A 20 EVQAEAGASATLSCEVA--QAQTEVTWYKDGKKLS 52 (102)
T ss_dssp EEEEETTCCEEECCBCS--CSSSCCEEEETTEECC
T ss_pred cEEEeCCCcEEEEEEec--CCCCceEEEECCEECC
Confidence 45789999999999985 7899999999998874
No 153
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.43 E-value=2e-07 Score=59.09 Aligned_cols=58 Identities=17% Similarity=0.311 Sum_probs=41.1
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
++..+.|+|..+...|.+...... ....+|+.++|.|.+.+++|++ .|+|||||+++.
T Consensus 102 ~~~~~~l~V~~~~~~P~v~~~~~~--~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~ 160 (438)
T 1qgc_4 102 FGAGTKLDLKRADAAPTVSIFPPS--SEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 160 (438)
T ss_dssp BCCCEEEEECCCCBCCEEEEECCC--HHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred ccCceeEEecCCCCCCEEEecCCC--hhhccCCceEEEEEEccccCCCcEEEEEECCEEcC
Confidence 356789999765445555432211 1234688999999998878887 999999998764
No 154
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.43 E-value=2.7e-08 Score=52.27 Aligned_cols=32 Identities=28% Similarity=0.613 Sum_probs=27.8
Q ss_pred EeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 32 EIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 32 ~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+|+.++|.|.+. +.|.+.|.|||+++.+.
T Consensus 21 ~v~~G~~v~l~C~~~-g~p~~~v~W~k~~~~~~ 52 (96)
T 2ens_A 21 AVAPGGTVTLTCEVP-AQPSPQIHWMKDGVPLP 52 (96)
T ss_dssp EECTTCEEEEECCCS-SCSSCCCCCEESSSBCS
T ss_pred EEcCCCeEEEEEEEc-cCCCCEEEEEECCEECc
Confidence 689999999999985 57889999999997753
No 155
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.42 E-value=2.3e-07 Score=55.81 Aligned_cols=53 Identities=17% Similarity=0.372 Sum_probs=37.8
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.|.|..+|... .........+.+|+.++|.|.+. ++|.+.|+||+||+.+.
T Consensus 184 ~~~~~v~~~p~~~---~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~v~W~~~g~~~~ 236 (291)
T 2wim_A 184 DIIVIVNVPPAIS---MPQKSFNATAERGEEMTFSCRAS-GSPEPAISWFRNGKLIE 236 (291)
T ss_dssp EEEEEEEBCCCCB---CSCSEEECCSSSCCEEEEECBCC-CBSCCEEEEEETTEECC
T ss_pred eEEEEeccCCccc---cCcccccceecCCCeEEEEEEee-cCCCCeEEEEECCEECc
Confidence 3567777777532 11111123578899999999995 57999999999999864
No 156
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.42 E-value=8e-08 Score=58.63 Aligned_cols=59 Identities=29% Similarity=0.470 Sum_probs=40.3
Q ss_pred cCCCEEEEEEcCC---CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPP---SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP---~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
++..+.|+|..++ ..|.+..... ....+.+|+.++|.|.+.+..|+ +.|+|||||+++.
T Consensus 132 ~~~~~~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~ 194 (279)
T 2wbj_D 132 FGPGTRLTVTEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 194 (279)
T ss_dssp ECCCEEEEEESCGGGCBCCEEEEEEC-CHHHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEECC
T ss_pred eCCCEEEEEecCCCCCCCCEEEEECC-CcccccCCCceEEEEEEeeEcCCCcEEEEEECCEECC
Confidence 4567899998732 3344433211 01124478999999999877675 7999999998863
No 157
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.42 E-value=2.5e-07 Score=57.78 Aligned_cols=49 Identities=20% Similarity=0.403 Sum_probs=35.7
Q ss_pred EEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 11 LYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 11 L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
|.|..|| .+... +..+.+.+|+.++|.|.+.+++|.+.++|||||+.+.
T Consensus 1 l~v~~~P---~~~~~--p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~ 49 (395)
T 1bih_A 1 LPVDKYP---VLKDQ--PAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYN 49 (395)
T ss_dssp ----CCC---EECCC--CSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCC
T ss_pred CCcCCCC---EeecC--CCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcc
Confidence 4566665 44332 3457889999999999998778999999999998763
No 158
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.42 E-value=1.8e-07 Score=57.21 Aligned_cols=57 Identities=21% Similarity=0.327 Sum_probs=39.3
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEc
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l 63 (65)
++..+.|+|.. ++..|.+...... ..+.+|+.++|.|.+.+..|.+ .|+|+|+++.+
T Consensus 114 ~~~~~~L~V~~~~~~~P~v~~~~p~--~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~ 172 (261)
T 2xqy_G 114 WGQGTTLTVSSAKTTAPSVYPLAPV--CGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 172 (261)
T ss_dssp ECCCEEEEECSSCCBCCEEEEECCC--CC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCT
T ss_pred ECCCEEEEEccCCCCCCeEEEeCCC--ccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcC
Confidence 45678999986 3344555432211 1356899999999998777876 99999998753
No 159
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.42 E-value=5.5e-07 Score=52.91 Aligned_cols=56 Identities=9% Similarity=0.185 Sum_probs=38.7
Q ss_pred CCCEEEEEEcCCC-ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEE----CCEEc
Q psy7728 6 GPRTRLYQFAPPS-SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR----GNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~-~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~----~~~~l 63 (65)
...+.|.|...+. .+.+... ......+.+|+.++|.|.+.+ +|.+.++||+ +|..+
T Consensus 99 ~~~~~l~V~~~~~~~~~~~~~-~~~~~~~~~g~~v~L~C~~~~-~p~p~v~W~~~~~~~g~~~ 159 (241)
T 3grw_A 99 RQTYTLDVLERSPHRPILQAG-LPANQTAVLGSDVEFHCKVYS-DAQPHIQWLKHVEVNGSKV 159 (241)
T ss_dssp EEEEEEEEECCCCCCCEEEEC-TTCSEECCTTCCEEEEEEEEC-SSCCEEEEEEECCSSSCSS
T ss_pred EEEEEEEEeccCCCCceeecC-CCccceecCCCEEEEEEEEec-CCCCEEEEEEcccCCCccc
Confidence 3457788887433 3333322 223457889999999999954 7889999999 66544
No 160
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.41 E-value=5.4e-07 Score=51.23 Aligned_cols=51 Identities=24% Similarity=0.483 Sum_probs=38.7
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.|.|.++|. +...+ ....+.+|+.++|.|.+. +.|.+.++||+++..+.
T Consensus 92 ~~~l~v~~~p~---~~~~~--~~~~~~~g~~~~l~C~~~-g~p~~~v~W~~~~~~~~ 142 (192)
T 2iep_A 92 CGALQVKMKPK---ITRPP--INVKIIEGLKAVLPCTTM-GNPKPSVSWIKGDSALR 142 (192)
T ss_dssp EEEEEEEEEEE---EEECC--CCEEEETTSCEEECCEEE-EESCCEEEEEETTEECC
T ss_pred EEEEEEEeCCc---cccCC--cceEEeCCCcEEEEEEEe-ccCCceEEEEeCCEEcc
Confidence 46788887764 33222 235788999999999985 47889999999998764
No 161
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=98.41 E-value=5.5e-07 Score=59.68 Aligned_cols=54 Identities=24% Similarity=0.514 Sum_probs=41.0
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
....+.|+|..+|. +...+ ..+.+.+|+.++|.|.+. |.|++.|+|||||+++.
T Consensus 373 ~~~~~~l~V~~~P~---~~~~~--~~~~~~~G~~v~l~C~~~-g~P~p~v~W~k~g~~l~ 426 (570)
T 3b43_A 373 ASSSTSLKVKEPPV---FRKKP--HPVETLKGADVHLECELQ-GTPPFQVSWHKDKRELR 426 (570)
T ss_dssp CEEEEEECEECCCE---ECSCC--CCEEECTTCCEEEEEEEE-SSSSCCCEEEETTEECC
T ss_pred EEEEEEEEecCCCe---eecCC--CceeecCCCEEEEEEEEe-cCCCCEEEEEECCEECc
Confidence 34457899998873 33222 235778999999999996 57999999999998863
No 162
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=98.41 E-value=1.3e-06 Score=50.84 Aligned_cols=42 Identities=21% Similarity=0.524 Sum_probs=32.7
Q ss_pred cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 20 IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 20 ~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
|.+...+. .+.+.+|+.++|.|.+. +.|.+.|+|||+|+.+.
T Consensus 7 P~~~~~p~--~~~v~~G~~v~l~C~~~-g~p~~~v~W~~~~~~~~ 48 (212)
T 2yd1_A 7 PEIIRKPQ--NQGVRVGGVASFYCAAR-GDPPPSIVWRKNGKKVS 48 (212)
T ss_dssp CEEEECCC--CEEEETTSCEEEEEEEE-CSSCCEEEEEETTEECC
T ss_pred CEEEcCCC--ceEEecCCEEEEEEEEc-cCCCCeEEEEECCEECC
Confidence 34443332 35789999999999996 47889999999998874
No 163
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.41 E-value=1.4e-06 Score=50.15 Aligned_cols=46 Identities=26% Similarity=0.276 Sum_probs=35.4
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..++|+|+.++..|.+..... ..+|+|.+.+ .|.+.|+|||||+.+
T Consensus 86 ~~~~L~V~~~~~~p~i~~~~~----------~~~L~C~~~~-~p~p~i~W~~~~~~l 131 (171)
T 1ccz_A 86 MKFFLYVLEMVSKPMIYWECS----------NATLTCEVLE-GTDVELKLYQGKEHL 131 (171)
T ss_dssp EEEEEEEECCCCCCEEEEETT----------TTEEEEECSS-CSSCEEEEEETTEEE
T ss_pred EEEEEEEECcCCCCEEEEecC----------CcEEEEEeCC-CCCcEEEEEECCEEC
Confidence 457899999888887754222 1289999976 488999999999876
No 164
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.40 E-value=6.1e-07 Score=50.78 Aligned_cols=29 Identities=21% Similarity=0.405 Sum_probs=25.3
Q ss_pred cCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 35 ENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 35 ~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+..+.|.|.+ .|+|.|.|+|||||++|.
T Consensus 14 ~~~~~~l~c~v-~G~P~P~I~W~knG~~l~ 42 (126)
T 1he7_A 14 EMHHWCIPFSV-DGQPAPSLRWLFNGSVLN 42 (126)
T ss_dssp CCCEEEEEEEE-CCSSCCEEEEEETTEECC
T ss_pred cCccEEEEEEE-eeeCCCeEEEEECCEECC
Confidence 56678999998 568999999999999885
No 165
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.40 E-value=1.6e-07 Score=49.99 Aligned_cols=33 Identities=15% Similarity=0.496 Sum_probs=28.9
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.+.+|+.++|.|.+. +.|.+.|.|||+|+.+
T Consensus 18 ~~~v~~G~~v~l~C~~~-g~p~p~v~W~~~g~~~ 50 (110)
T 2dm3_A 18 DLTVQEGKLCRMDCKVS-GLPTPDLSWQLDGKPV 50 (110)
T ss_dssp EEEEESSSCBCCEEEEE-CSSCCEEECBBSSSBC
T ss_pred cEEEeCCCEEEEEEEEE-EcCCCEEEEEECCEEC
Confidence 46789999999999996 5799999999998765
No 166
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.39 E-value=1.2e-07 Score=58.63 Aligned_cols=59 Identities=12% Similarity=0.160 Sum_probs=29.5
Q ss_pred CCCEEEEEEcCCC---ccEEEeCCCCCeEEeecCCcEEEEEEecC---CCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPS---SIEIVGHPSNSKIEIRENQEITLECLVKN---AKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~---~~~i~~~~~~~~~~~~~G~~~~L~C~~~~---~~P~~~i~W~~~~~~l~ 64 (65)
...+.|+|..++. .|.+........+.+.+|+.++|.|.+.+ +.|.+.|+||+||+.+.
T Consensus 208 ~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~ 272 (349)
T 4dep_C 208 TRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPD 272 (349)
T ss_dssp EEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC---
T ss_pred EEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEcc
Confidence 3455677776432 34554332212226789999999999975 47999999999998753
No 167
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.39 E-value=4.9e-07 Score=56.39 Aligned_cols=54 Identities=19% Similarity=0.361 Sum_probs=40.5
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
....+.|+|..+|. +.... ....+.+|+.++|.|.+. +.|.+.|+|||||+.+.
T Consensus 283 ~~~~~~l~V~~~p~---~~~~~--~~~~~~~g~~~~l~C~~~-g~p~p~v~W~~~g~~~~ 336 (382)
T 1cs6_A 283 DTYQGRIIIHAQPD---WLDVI--TDTEADIGSDLRWSCVAS-GKPRPAVRWLRDGQPLA 336 (382)
T ss_dssp EEEEEEEEEEEEEE---EEECC--CCEEEETTCCEEEECEEE-EESCCEEEEEETTEECC
T ss_pred EEEEEEEEEecCCC---cccCC--CccEEcCCCeEEEEEEee-eecCCEEEEEECCEECC
Confidence 34457888888764 32222 235789999999999995 57999999999999864
No 168
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.39 E-value=1.5e-07 Score=56.64 Aligned_cols=59 Identities=24% Similarity=0.429 Sum_probs=39.3
Q ss_pred cCCCEEEEEEcC---CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAP---PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~p---P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
++..+.|+|... +..|.+..... ....+.+|+.++|.|.+.+..|++ .|+|+|||+++.
T Consensus 106 ~~~~t~l~V~~~~~~~~~P~v~~~~~-~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~ 168 (253)
T 3to4_D 106 FGEGSKLTVLEDLKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 168 (253)
T ss_dssp ECCCEEEEEESCSTTCBCCEEEEEEC-CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred ECCCEEEEEecCCCCCCCCeEEEeCC-ChhhcccCCceEEEEEEceEECCcEEEEEEECCEECC
Confidence 456678999852 23344432111 011233578999999998878877 899999999864
No 169
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.39 E-value=1.9e-07 Score=48.89 Aligned_cols=32 Identities=19% Similarity=0.527 Sum_probs=27.6
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.+.+|+.++|.|.+.+ .| +.|+|||+|+.+
T Consensus 18 ~~~v~~G~~v~l~C~~~g-~p-p~i~W~k~g~~~ 49 (95)
T 2ckn_A 18 SLLVHPGDLLQLRCRLRD-DV-QSINWLRDGVQL 49 (95)
T ss_dssp CEEECTTSCEEEECCEES-SC-CEEEEEBTTBCC
T ss_pred eEEEcCCCeEEEEEECCC-CC-CceEEEECCEec
Confidence 467899999999999976 46 699999999876
No 170
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.39 E-value=3.4e-08 Score=58.14 Aligned_cols=58 Identities=22% Similarity=0.461 Sum_probs=36.6
Q ss_pred cCCCEEEEEEcCC-CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPP-SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP-~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
++..+.|+|...| ..|.+...... ....+|+.++|.|.+.++.|+ +.|+|||||+++.
T Consensus 120 ~~~~~~l~V~~~~~~~p~v~~~~~~--~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~ 179 (234)
T 2j6e_L 120 FGGGTKLTVLGQPKAAPSVTLFPPS--SEELQANKATLVCLISDFFPGAVTVAWKADGAPVK 179 (234)
T ss_dssp ECCCBCCCBCCCCCCCCCCCEECCC--HHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECC
T ss_pred ecCCEEEEEecCCCCCCcccccCCC--hhHhcCCceEEEEEEEEEcCCceEEEEEECCEECC
Confidence 3456777775432 22222221110 123468899999999877666 5999999999863
No 171
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.39 E-value=7.9e-08 Score=58.92 Aligned_cols=50 Identities=24% Similarity=0.354 Sum_probs=35.2
Q ss_pred EEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEc
Q psy7728 9 TRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTEL 63 (65)
Q Consensus 9 ~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l 63 (65)
+.|+|.++|.. .+..... ..+.+|+.++|.|.+.+ +|.| .|+|||+|+++
T Consensus 209 ~~l~V~~~P~v-~~~~~~~---~~~~~g~~v~l~C~~~g-~P~p~~v~W~~~~~~l 259 (313)
T 4fqp_A 209 VNLTVYYPPEV-SISGYDN---NWYLGQNEATLTCDARS-NPEPTGYNWSTTMGPL 259 (313)
T ss_dssp EECCBCEEEEE-EEECCCS---CEETTCCCEEEEEEEEE-ESCCCEEEEEETTBSC
T ss_pred eecccccCCcc-ccccccc---eeecCCCeEEEEEEecC-CCCCcEEEEEECCEEC
Confidence 55667677642 2332222 35678999999999964 7877 79999999765
No 172
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.39 E-value=5.4e-07 Score=56.25 Aligned_cols=54 Identities=24% Similarity=0.321 Sum_probs=41.1
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
....+.|+|..+|. +.. ......+.+|+.++|.|.+. ++|.+.|+|+|+|+.+.
T Consensus 89 ~~~~~~l~V~~~P~---~~~--~~~~~~~~~g~~~~l~C~~~-g~p~~~i~W~~~g~~l~ 142 (389)
T 2jll_A 89 HQKSMYLDIEYAPK---FIS--NQTIYYSWEGNPINISCDVK-SNPPASIHWRRDKLVLP 142 (389)
T ss_dssp EEEEEEEEEEEEEE---ECC--SCCEEEECTTCCEEEEECEE-EESCCEEEEEETTEESS
T ss_pred cceEEEEEEEeCCE---Eec--CcceEEeccCCEEEEEEEEE-ecCCCeEEEEECCccCC
Confidence 34568899998773 332 22234678999999999986 57999999999998864
No 173
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=9.6e-08 Score=51.31 Aligned_cols=34 Identities=18% Similarity=0.549 Sum_probs=27.9
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.+.+|+.++|.|.+.+..+++.+.|||||+++
T Consensus 17 ~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i 50 (104)
T 2eny_A 17 TMEVLEGESCSFECVLSHESASDPAMWTVGGKTV 50 (104)
T ss_dssp CEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBC
T ss_pred CcEEcCCCcEEEEEEEcCCCCCceeEEEECCEEC
Confidence 4688999999999999664335689999999876
No 174
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=98.38 E-value=2.1e-06 Score=52.65 Aligned_cols=55 Identities=7% Similarity=0.135 Sum_probs=42.4
Q ss_pred ccCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 4 RYGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+..+.|.|...+..|.+...+.. .+.+|+.++|.|.+. .|++.+.|||+|..+
T Consensus 104 ~~s~~~~l~V~~~~~~p~~~~~~~~---~v~~G~~v~L~C~~~--~~~~~~~w~k~g~~~ 158 (316)
T 3vh8_G 104 APSNPVVIMVTGNHRKPSLLAHPGP---LVKSGERVILQCWSD--IMFEHFFLHKEGISK 158 (316)
T ss_dssp CCCCCEEEEEECSSCCCEEEEESCS---EEETTCCEEEEEEES--SCCSEEEEEETTCCS
T ss_pred cCCCcEEEEEecCCCCCeEEecCCC---ccCCCCeEEEEEcCC--CCCcEEEEEECCCcc
Confidence 3456789999887777777654432 378999999999983 467799999998754
No 175
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=98.38 E-value=3.8e-07 Score=52.29 Aligned_cols=35 Identities=20% Similarity=0.336 Sum_probs=30.3
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+..+.|.+.|+|||||+.+.
T Consensus 11 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~ 45 (195)
T 2c5d_C 11 NITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILE 45 (195)
T ss_dssp CEEECTTCCEEEEEEEEEESSCCCCEEEETTEECC
T ss_pred heEEecCCcEEEecccccCCCCcEEEEEECCEEcc
Confidence 35789999999999997468999999999998864
No 176
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=98.38 E-value=8.1e-07 Score=54.54 Aligned_cols=54 Identities=11% Similarity=0.170 Sum_probs=41.9
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+..+.|.|...+..|.+...+.. .+.+|+.++|.|.+. .|.+.+.|||+|..+
T Consensus 205 ~s~~~~l~V~~~~~~p~i~~~~~~---~v~~G~~v~L~C~~~--~~~~~~~W~k~g~~~ 258 (316)
T 3vh8_G 205 PSDPLDIVVTGPYEKPSLSAQPGP---KVQAGESVTLSCSSR--SSYDMYHLSREGGAH 258 (316)
T ss_dssp CCCCEEEEEECSSCCCEEEEESCS---CCCTTSCCEEEEEES--SCCSEEEEEETTSSC
T ss_pred CCCCEEEEecCCCCCCeEEeCCCC---eecCCCcEEEEEECC--CCCcEEEEEECCCcC
Confidence 366788999877667777654432 578999999999995 478999999998653
No 177
>3p73_B Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, immune system; HET: 16A; 1.32A {Gallus gallus} SCOP: b.1.1.0 PDB: 3p77_B* 4g43_B 4g42_B 4e0r_B 3bev_B 3bew_B 3jvg_C* 2yez_B 2yf5_B 2yf6_B 2yf1_B*
Probab=98.38 E-value=6.7e-07 Score=48.30 Aligned_cols=31 Identities=13% Similarity=0.350 Sum_probs=26.7
Q ss_pred ecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
..|..++|+|.+.+..|+ ..|+|+|||+++.
T Consensus 16 ~~~~~~~L~C~~~gFyP~~i~v~W~~~g~~~~ 47 (99)
T 3p73_B 16 SAGTKNVLNCFAAGFHPPKISITLMKDGVPME 47 (99)
T ss_dssp CTTSCEEEEEEEEEESSSCCEEEEEETTEECT
T ss_pred cCCCCEEEEEEEeeeECCCeEEEEEECCeeCC
Confidence 457789999999998887 5899999999874
No 178
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.38 E-value=3.2e-07 Score=48.36 Aligned_cols=32 Identities=13% Similarity=0.523 Sum_probs=27.8
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+.+.+|+.++|.|.+. .|.+.|+|||||+.+.
T Consensus 18 ~~v~~G~~v~l~C~~~--~p~~~v~W~k~g~~i~ 49 (100)
T 2yuv_A 18 YQVDKGGRVRFVVELA--DPKLEVKWYKNGQEIR 49 (100)
T ss_dssp EEECTTEEEEEEEEES--CTTSCEEEEESSCBCC
T ss_pred cEEcCCCcEEEEEEec--CCCceEEEEECCEECC
Confidence 4678999999999996 5999999999998763
No 179
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=98.37 E-value=1.8e-06 Score=52.52 Aligned_cols=45 Identities=22% Similarity=0.400 Sum_probs=34.3
Q ss_pred CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 18 SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 18 ~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..|.+.. +....+.+.+|+.++|.|.+. ++|.+.|+||+||+.+.
T Consensus 207 ~~P~~~~-~~~~~~~~~~g~~v~l~C~~~-g~P~p~i~W~~~g~~i~ 251 (315)
T 1itb_B 207 TRPVIVS-PANETMEVDLGSQIQLICNVT-GQLSDIAYWKWNGSVID 251 (315)
T ss_dssp CCCEECS-CCSEEEECCSSSCEEEEEEEE-ECTTSEEEEEETTEECC
T ss_pred CCCEEec-CCCCcEEEeCCCcEEEEEEEe-cCCCCeeEEEECCEECC
Confidence 4455543 222345789999999999996 48999999999998764
No 180
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.37 E-value=6.4e-07 Score=52.02 Aligned_cols=57 Identities=11% Similarity=0.180 Sum_probs=39.9
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEE----CCEEc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR----GNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~----~~~~l 63 (65)
...+.|.|..++..+............+.+|+.++|.|.+.+ +|.+.++||+ +|..+
T Consensus 103 ~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~-~p~p~v~W~~~~~~~g~~~ 163 (231)
T 3ojm_B 103 NHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYS-DAQPHIQWIKHVEKNGSKY 163 (231)
T ss_dssp EEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEEC-SSCCEEEEEEECCBTTBSB
T ss_pred cccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEec-CCCCEEEEEECCCCCCccc
Confidence 345778888765533233222234567899999999999865 7889999999 66543
No 181
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.37 E-value=1.5e-06 Score=52.39 Aligned_cols=51 Identities=16% Similarity=0.346 Sum_probs=35.9
Q ss_pred CCCEEEEEEcC-CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCE
Q psy7728 6 GPRTRLYQFAP-PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNT 61 (65)
Q Consensus 6 ~~~~~L~V~~p-P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~ 61 (65)
+..+.|.|..+ |-.+.+.... ..+.+|+.++|.|.+.+ +|.+.|+||++++
T Consensus 169 s~~~~l~v~~~~~p~i~~~~~~----~~v~~G~~v~L~C~~~g-~p~p~v~W~~~~~ 220 (289)
T 3mjg_X 169 SDAYYVYRLQVSSINVSVNAVQ----TVVRQGENITLMCIVIG-NEVVNFEWTYPRK 220 (289)
T ss_dssp CCCEEEEECCCCCCCCEEEESC----SEEETTSCEEEEEEEES-CSSBEEEEECTTS
T ss_pred eeeEEEEecCCCCCCcEEeCCc----ceeEcCCCEEEEEEECC-CCCcceEEEcCCc
Confidence 44567777762 2223333222 26899999999999966 8999999998765
No 182
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.37 E-value=7.2e-07 Score=54.59 Aligned_cols=52 Identities=15% Similarity=0.288 Sum_probs=38.5
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecC---CcEEEEEEecCCCCCceEEEEEC
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIREN---QEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G---~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
....+.|+|..+|....... ...+.+.+| +.++|.|.+..++|.+.|+|||+
T Consensus 119 ~~~~~~l~V~~~p~~~~~~~---~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~ 173 (331)
T 3u83_A 119 RESQLNLTVMAKPTNWIEGT---QAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETR 173 (331)
T ss_dssp EEEEEEEEEEBCCEEEEEEC---SSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEES
T ss_pred cEEEEEEEEecCCcceeecC---CCceeecCCCccceEEEEEEecCCcCCceEEEEcC
Confidence 44568899999886432222 234678888 77999998567789999999995
No 183
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.36 E-value=8e-08 Score=58.90 Aligned_cols=56 Identities=18% Similarity=0.318 Sum_probs=33.8
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~ 62 (65)
++..+.|+|.. ++..|.+...... ..+.+|+.++|.|.+.+..|.+ .|+|+|+++.
T Consensus 118 ~~~~t~L~V~~~~~~~P~v~~~~p~--~~~~~g~~v~L~C~~~g~~P~pi~v~W~k~g~~ 175 (257)
T 3bn9_D 118 WGQGTMVTVSSASTKGPSVFPLAPS--SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 175 (257)
T ss_dssp ECCCEEEEECSSCCBCCEECCCCC-------------CCCEEEEEBSSCCEEEETTTTCC
T ss_pred eCCcEEEEecCCCCcCCcEEEecCc--ccccCCCcEEEEEEEeeEECCCcEEEEeeCCCc
Confidence 45678999987 4455666433221 1357899999999998877877 9999999875
No 184
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.36 E-value=1.1e-06 Score=50.56 Aligned_cols=35 Identities=23% Similarity=0.599 Sum_probs=30.4
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
....+.+|+.++|.|.+. ++|.+.+.|||+|+++.
T Consensus 125 ~~~~v~~g~~~~l~C~~~-g~p~p~v~W~~~~~~~~ 159 (212)
T 2r15_A 125 DVVTIQEGKALNLTCNVW-GDPPPEVSWLKNEKALA 159 (212)
T ss_dssp SEEEEETTCCEEEEEEEE-CSSCCEEEEEETTEEEC
T ss_pred CcEEEccCCeEEEEEEEc-CCCCceEEEEECCeECc
Confidence 356789999999999996 58999999999998864
No 185
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.35 E-value=5.3e-07 Score=47.65 Aligned_cols=32 Identities=13% Similarity=0.506 Sum_probs=27.4
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+.+.+|+.++|.|.+.+ .|.+ |.|||+|+.+.
T Consensus 20 ~~v~~G~~v~l~C~~~~-~p~~-v~W~k~g~~~~ 51 (104)
T 2e6p_A 20 LTFTTSERVVLTCELSR-VDFP-ATWYKDGQKVE 51 (104)
T ss_dssp EEEESSSCEECCEECSS-TTCC-CEEEETTEECC
T ss_pred EEEeCCCcEEEEEEecC-CCCc-cEEeeCCEECC
Confidence 57899999999999854 5777 99999998864
No 186
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.35 E-value=2.2e-06 Score=48.61 Aligned_cols=47 Identities=21% Similarity=0.403 Sum_probs=36.1
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEE
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYR 58 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~ 58 (65)
...+.|+|.++|... ..+ ....+.+|+.++|.|.+. ++| ++.|+|||
T Consensus 73 ~~~~~l~V~~~P~~~---~~~--~~~~~~~g~~~~l~C~~~-g~p~~~~i~W~~ 120 (184)
T 3b5h_A 73 MGTANIQLHGPPRVK---AVK--SSEHINEGETAMLVCKSE-SVPPVTDWAWYK 120 (184)
T ss_dssp SCEEEEEECCSCCCE---ESC--SEEEECTTSCEEEEEECC-CSSCCCEEEEEE
T ss_pred CcEEEEEEecCCcee---ecC--CCcEEcCCCcEEEEEEEC-CCCCCCeEEEEE
Confidence 356789999888642 222 235789999999999996 467 89999999
No 187
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.35 E-value=1e-06 Score=53.36 Aligned_cols=34 Identities=32% Similarity=0.676 Sum_probs=30.4
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+.+.+|+.++|.|.+.+..|.+.|+|||+|+.+.
T Consensus 16 ~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~ 49 (317)
T 2y25_A 16 WEVTGECNVLLKCKVANIKKETHIVWYKDEREIS 49 (317)
T ss_dssp EEEETTTEEEEEEEEESCCTTCEEEEEETTEEEC
T ss_pred EEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcC
Confidence 5789999999999998777899999999998764
No 188
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.35 E-value=1.5e-06 Score=51.57 Aligned_cols=54 Identities=13% Similarity=0.332 Sum_probs=37.7
Q ss_pred cCCCEEEEEEcCCC------------ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEE--CCE
Q psy7728 5 YGPRTRLYQFAPPS------------SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR--GNT 61 (65)
Q Consensus 5 ~~~~~~L~V~~pP~------------~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~--~~~ 61 (65)
++..+.|+|..+|. .+.+... +..+.+.+|+.++|.|.+.+ .|++.|+||| +|+
T Consensus 109 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~G~~v~L~C~~~~-~~~~~v~W~k~~~g~ 176 (247)
T 2ghw_B 109 WGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQS--PATLSLSPGERATLSCRASQ-SVRSNLAWYQQKPGQ 176 (247)
T ss_dssp ECCCEEEEECSCC------------CCCCEEEE--CSEEEECTTSCEEEEEEESS-CCTTCEEEEEECTTS
T ss_pred cCCceEEEEecccccccccccCCCCcceEEEcc--CCEEEecCCCcEEEEEEeCC-CccceEEEEEECCCC
Confidence 45677899987642 2223221 23457899999999999965 5777999999 554
No 189
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.34 E-value=4.7e-07 Score=47.77 Aligned_cols=32 Identities=31% Similarity=0.632 Sum_probs=27.1
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.+.+|+.++|.|.+.+ .|.+ |+|||+++.+
T Consensus 17 ~~~v~~G~~v~l~C~~~~-~p~~-v~W~k~~~~l 48 (103)
T 2e7b_A 17 DLEVLEGGAATLRCVLSS-VAAP-VKWCYGNNVL 48 (103)
T ss_dssp CEEEESSSCEEEEEECSS-CCCS-CEEEESSSBC
T ss_pred cEEEECCCcEEEEEEEeC-CCCC-eEEEECCEEC
Confidence 367899999999999854 6777 9999998765
No 190
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.33 E-value=1e-06 Score=47.15 Aligned_cols=30 Identities=20% Similarity=0.433 Sum_probs=25.4
Q ss_pred eEEeecCCcEEEEEEecCCCCC---ceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPA---AKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~---~~i~W~~~~ 60 (65)
.+.+.+|+.++|.|.+. +.|. +.|+|||++
T Consensus 13 ~~~v~~G~~v~L~C~~~-g~p~~~~p~v~W~k~~ 45 (108)
T 3cx2_A 13 DGEVTVGGSITFSARVA-GASLLKPPVVKWFKGK 45 (108)
T ss_dssp CEEEETTCCEEEEEEEE-CC-CCSCCEEEEEETT
T ss_pred cEEEeCCCCEEEEEEEC-CCccCCCcEEEEccCC
Confidence 46789999999999996 4677 999999986
No 191
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.33 E-value=1.2e-07 Score=55.53 Aligned_cols=49 Identities=16% Similarity=0.293 Sum_probs=35.2
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEE-EEEEecCCCCCceEEEEECC
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEIT-LECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~-L~C~~~~~~P~~~i~W~~~~ 60 (65)
...+.|+|..+|... +..... ..+|+.++ |+|.+.+++|++.|+|||++
T Consensus 106 ~~~~~L~V~~~P~~~-~~~~~~-----~~~g~~~~~l~C~~~~g~P~p~v~W~k~~ 155 (221)
T 3eow_R 106 SVDIWLRVLAKPQNT-AEVQKV-----QLTGEPVPMARCVSTGGRPPAQITWHSDL 155 (221)
T ss_dssp EEECCCCCCCCCEEE-EEEECC-----CCCSSSCCEEEEEEESCSSCCCEEEECSS
T ss_pred EEEEEEEEEECCCce-eecCCc-----ccCCceEEEEEEECCCccCCCeeEEEeCC
Confidence 344678888877543 222222 26788885 99999888999999999974
No 192
>1k5n_B Beta-2-microglobulin, light chain; MHC(major histocompatibility complex), HLA(human leukocyte A immune system; 1.09A {Homo sapiens} SCOP: b.1.1.2 PDB: 1a9b_B 1b0g_B 1b0r_B 1bd2_B 1cg9_B 1a9e_B 1duy_B 1eey_B 1eez_B 1efx_B 1gzp_B* 1gzq_B* 1hhg_B 1hhh_B 1hhi_B 1hhj_B 1hhk_B 1i1f_B 1i1y_B 1duz_B* ...
Probab=98.33 E-value=6.5e-07 Score=48.39 Aligned_cols=32 Identities=13% Similarity=0.346 Sum_probs=27.3
Q ss_pred eecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
...|+.++|.|.+.+.+|+. .|+|+|||+++.
T Consensus 16 ~~~~~~~~L~C~~~gFyP~~i~v~W~k~g~~~~ 48 (100)
T 1k5n_B 16 AENGKSNFLNCYVSGFHPSDIEVDLLKNGERIE 48 (100)
T ss_dssp CCTTSCEEEEEEEEEEBSSCCEEEEEETTEECT
T ss_pred ccCCCcEEEEEEEEeeECCceEEEEEECCEECC
Confidence 34567899999999988875 899999999874
No 193
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=98.33 E-value=1.4e-06 Score=57.70 Aligned_cols=56 Identities=18% Similarity=0.303 Sum_probs=40.5
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.|+|......|.+...+. .+.+.+|+.++|.|.+.+ .|++.|+|+|||+++.
T Consensus 184 ~~~~~l~v~~~~~pp~~~~~p~--~~~v~~G~~~~l~C~~~g-~p~p~i~W~k~g~~i~ 239 (570)
T 3b43_A 184 SSSAKLTLSEHEVPPFFDLKPV--SVDLALGESGTFKCHVTG-TAPIKITWAKDNREIR 239 (570)
T ss_dssp EEEEEEEEECCCCCCEEEECCC--CBCCBSBSCEEEEEEEES-SSCCEEEEEETTEECC
T ss_pred EEEEEEEEcCCCCCCccccCCc--eeEecCCCeEEEEEEEEE-CCCCEEEEEECCEECc
Confidence 3456778876444445543332 245789999999999965 6889999999998763
No 194
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.32 E-value=4.5e-07 Score=54.69 Aligned_cols=55 Identities=24% Similarity=0.373 Sum_probs=38.1
Q ss_pred cCCCEEEEEE-cCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCE
Q psy7728 5 YGPRTRLYQF-APPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNT 61 (65)
Q Consensus 5 ~~~~~~L~V~-~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~ 61 (65)
++..+.|+|. ..+..|.+..... ...+.+|+.++|.|.+.+..|.+ .++|+++|+
T Consensus 109 ~~~~~~l~V~~~~~~~P~i~~~~~--~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 165 (253)
T 3liz_H 109 WGQGTLVTVSAAKTTPPSVYPLAP--GSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (253)
T ss_dssp ECCCEEEEECSSCCBCCEEEEECC--------CCEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred ECCCEEEEEeccCCCCCeEEEecC--CcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCe
Confidence 4667899998 5556666653222 12456799999999998877876 899999986
No 195
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.32 E-value=1.6e-06 Score=50.98 Aligned_cols=43 Identities=16% Similarity=0.395 Sum_probs=31.1
Q ss_pred ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 19 SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 19 ~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
+|.|...+. ...+.+|+.++|.|.+.+ .|.+ .|+|||||+.+.
T Consensus 7 ~p~i~~~p~--~~~v~~G~~v~L~C~~~~-~p~~~~v~W~k~g~~l~ 50 (204)
T 3sgj_C 7 KAVVFLEPQ--WYRVLEKDSVTLKCQGAY-SPEDQSTQWFHNESLIS 50 (204)
T ss_dssp BCEEEEESC--CSEEETTCCEEEEEECCS-SSSCCCEEEEETTEEES
T ss_pred CCeEEEcCC--CeEEECCCCEEEEEcCCC-CCCCcEEEEEECCEEcc
Confidence 345544332 136899999999999966 4554 599999998864
No 196
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.32 E-value=1.7e-06 Score=50.19 Aligned_cols=42 Identities=29% Similarity=0.720 Sum_probs=32.9
Q ss_pred cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 20 IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 20 ~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
|.+...+ ..+.+.+|+.++|.|.+.+ +|.+.|+|||+|+.+.
T Consensus 10 P~i~~~p--~~~~v~~G~~v~L~C~~~g-~p~~~v~W~~~g~~~~ 51 (217)
T 2vr9_A 10 PRIIEHP--TDLVVKKNEPATLNCKVEG-KPEPTIEWFKDGEPVS 51 (217)
T ss_dssp CEEEECC--CCEEECTTSCEEECCEEEC-SSCCEEEEEETTEECC
T ss_pred CEEecCC--CceEEeCCCcEEEEEEcCC-CCCCeEEEEECCcCcc
Confidence 3454433 2467899999999999964 7899999999998864
No 197
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=98.32 E-value=7.6e-07 Score=57.72 Aligned_cols=49 Identities=10% Similarity=0.205 Sum_probs=38.0
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.|+|..+|..+ .....+.+|+.++|.|.+.+.+|.+.|+|+|+|+.+
T Consensus 221 ~~~l~V~~~p~~~-------~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l 269 (423)
T 3qs7_E 221 LFTIDLNQTPQTT-------LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKAL 269 (423)
T ss_dssp CEEEESSSCCCSS-------TTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBC
T ss_pred eEEEEEecCCccC-------CCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEc
Confidence 4667777666532 124578999999999999876888999999998764
No 198
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.32 E-value=2.7e-06 Score=51.49 Aligned_cols=34 Identities=29% Similarity=0.652 Sum_probs=29.6
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. ++|.+.|+|||+|+.+.
T Consensus 13 ~~~v~~G~~v~l~C~~~-g~p~~~v~W~~~~~~~~ 46 (305)
T 2nzi_A 13 NLNVRYQSNATLVCKVT-GHPKPIVKWYRQGKEII 46 (305)
T ss_dssp CEEECTTCCEEEEEEEE-CSSCCEEEEEETTEECC
T ss_pred ceEEeCCCcEEEEEEEe-CCCCCeEEEEECCEEcc
Confidence 46789999999999995 57999999999998763
No 199
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.32 E-value=2.4e-07 Score=48.96 Aligned_cols=31 Identities=10% Similarity=0.442 Sum_probs=27.3
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
+.+.+|+.++|.|.+.+ |.+.|.|||||+.+
T Consensus 18 ~~v~~G~~v~l~C~~~~--~~~~v~W~k~g~~~ 48 (103)
T 2edf_A 18 QWVAPGEDVELRCELSR--AGTPVHWLKDRKAI 48 (103)
T ss_dssp EEECTTSCEEECCEESS--SSCCCCEEESSCBC
T ss_pred cEEcCCCCEEEEEEEeC--CCCcEEEEECCEEc
Confidence 57899999999999964 78899999999876
No 200
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.32 E-value=3.4e-07 Score=53.56 Aligned_cols=56 Identities=23% Similarity=0.415 Sum_probs=37.7
Q ss_pred cCCCEEEEEE-cCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEECCEE
Q psy7728 5 YGPRTRLYQF-APPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~-~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~~~~ 62 (65)
++..+.|+|. .++..|.+...... ..+.+|+.++|.|.+.+..| +..+.|+|+|+.
T Consensus 105 ~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~ 162 (215)
T 3nl4_H 105 WGPGTLVTVSSGQPKAPSVFPLAPC--CGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLT 162 (215)
T ss_dssp ECCCEEEEECSSCCBCCEEEEECCC--TTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred EcCCEEEEEeCCCcCCCEEEEecCC--ccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEE
Confidence 5677899998 45556666522211 13567999999999988666 456889999863
No 201
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.31 E-value=1.6e-06 Score=56.91 Aligned_cols=54 Identities=4% Similarity=0.103 Sum_probs=39.9
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecC---CCCCceEEEEECCEEc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKN---AKPAAKIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~---~~P~~~i~W~~~~~~l 63 (65)
....+.|+|..+|.... . +....+.+|+.++|+|.+.+ +.|.+.|+|||||+.+
T Consensus 431 ~~~~~~l~V~~~~p~~~--~---~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~ 487 (585)
T 2ocw_A 431 WRTTVEIKIIEGEPNLK--V---PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQA 487 (585)
T ss_pred cceeEEEEEecCccccc--c---CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCcee
Confidence 34567888887543322 1 23457899999999999963 5789999999999765
No 202
>1lk2_B Beta-2-microglobulin; class I MHC-peptide complex, high resolution, anisotropic AN refinement, immune system; HET: NAG FUC; 1.35A {Mus musculus} SCOP: b.1.1.2 PDB: 1bqh_B 1cd1_B 1fo0_L* 1fzj_B* 1fzm_B* 1fzo_B* 1g6r_L 1fzk_B* 1g7q_B* 1hoc_B 1inq_B 1juf_B 1k8d_B 1kbg_L* 1kj2_L* 1kj3_L 1kpu_B* 1kpv_B* 1ld9_B 1ldp_L* ...
Probab=98.31 E-value=7.4e-07 Score=48.09 Aligned_cols=32 Identities=16% Similarity=0.339 Sum_probs=27.1
Q ss_pred eecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
...|+.++|.|.+.+..|+. .|+|+|||+++.
T Consensus 15 ~~~~~~~~L~C~~~gfyP~~i~v~W~k~g~~~~ 47 (99)
T 1lk2_B 15 PENGKPNILNCYVTQFHPPHIEIQMLKNGKKIP 47 (99)
T ss_dssp CCTTSCEEEEEEEEEEBSSCCEEEEEETTEECT
T ss_pred ccCCCCEEEEEEEEEEECCCcEEEEEECCEECC
Confidence 34577899999999988864 899999999875
No 203
>3gbl_A BETA2-microglobulin; immune response, immunoglobulin domain, MHC I, secreted, immune system; 2.10A {Ctenopharyngodon idella} SCOP: b.1.1.0
Probab=98.31 E-value=1.4e-06 Score=46.89 Aligned_cols=31 Identities=23% Similarity=0.334 Sum_probs=27.0
Q ss_pred ecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
..|..++|.|.+.+..|+. .|+|+|||+++.
T Consensus 16 ~~~~~~~L~C~~~gFyP~~i~v~W~~~g~~~~ 47 (97)
T 3gbl_A 16 EYGKENTLICYVSGFHPPDISIELLKNGEVIA 47 (97)
T ss_dssp CTTCCEEEEEEEECCBSSCEEEEEEETTEECT
T ss_pred cCCCcEEEEEEEcceeCCccEEEEEECCccCc
Confidence 3578899999999998876 899999999874
No 204
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.31 E-value=3.9e-07 Score=51.83 Aligned_cols=32 Identities=16% Similarity=0.479 Sum_probs=28.4
Q ss_pred CCeEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 28 NSKIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 28 ~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
+..+.+.+|+.++|.|.+. |.|.|.|+|+|+|
T Consensus 25 p~~~~v~~G~~v~L~C~~~-G~P~P~i~W~k~g 56 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPIS-GDPAPTVIWQKAI 56 (139)
T ss_dssp CCEEEESSSSCCCCEEECC-SBSCCEEEEEEEC
T ss_pred CCCEEEeCCCeEEEEEEEE-EcCCCeEEEEECC
Confidence 3567899999999999985 5899999999998
No 205
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.31 E-value=2.1e-06 Score=53.66 Aligned_cols=59 Identities=20% Similarity=0.360 Sum_probs=43.0
Q ss_pred cCCCEEEEEEcCCCccEE-EeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEI-VGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i-~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+..+.|.|..+|..+.. ..........+.+|+.++|.|.+. ++|++.++|||++..+.
T Consensus 204 ~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~~p~~~~~W~~~~~~~~ 263 (403)
T 3laf_A 204 TGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVS-GYPPPSFTWLRGEEVIQ 263 (403)
T ss_dssp BCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEE-EESCCEEEEEETTEECC
T ss_pred eccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcC-CCCCCeEEEEECCeecc
Confidence 445789999988765321 111122345788999999999996 47889999999998763
No 206
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.31 E-value=1.5e-06 Score=52.11 Aligned_cols=54 Identities=22% Similarity=0.409 Sum_probs=38.5
Q ss_pred ccCCCEEEEEEcCCCc--------------cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 4 RYGPRTRLYQFAPPSS--------------IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~~--------------~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.++..+.|.|..++.. +.+.. .+..+.+.+|+.++|.|.+.+..|.+.+.|||+
T Consensus 107 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~--~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 174 (259)
T 3omz_A 107 LFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQ--AQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKR 174 (259)
T ss_dssp EECCCEEEEEEC------------------CEEEC--CCCCEEEETTCCEEECCEEECCCSSCEEEEEEE
T ss_pred EECCCCEEEEecCCCCccccccccccccCCeeeEE--eCCEEEEcCCCCEEEEEECCCccCCceEEEeee
Confidence 4667789999975422 23332 233468899999999999877668999999995
No 207
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=98.30 E-value=1.2e-07 Score=58.12 Aligned_cols=54 Identities=22% Similarity=0.294 Sum_probs=39.1
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCce-EEEEECCEEc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAK-IVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~-i~W~~~~~~l 63 (65)
....+.|+|.++|.. .+.... ...+.+|+.++|.|.+. ++|.+. |+||+++..+
T Consensus 220 ~~~~~~l~V~~~P~~-~~~~~~---~~~~~~g~~~~l~C~~~-g~p~p~~i~W~~~~~~~ 274 (331)
T 3u83_A 220 FKESLTLNVQYEPEV-TIEGFD---GNWYLQRMDVKLTCKAD-ANPPATEYHWTTLNGSL 274 (331)
T ss_dssp EEEEEECCEEEEEEE-EEECCC---SCCBTTCCCEEEEEEEE-EESCCCEEEEEETTBSC
T ss_pred ceeeEEEEEecCCeE-EEecCC---CceEeCCCeEEEEEeCc-CCCCCCEEEEEECCCcc
Confidence 445678888888742 232222 12578999999999995 468887 9999998765
No 208
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.30 E-value=6.6e-07 Score=56.70 Aligned_cols=57 Identities=21% Similarity=0.324 Sum_probs=40.7
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEc
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l 63 (65)
++..+.|.|.. ++..|.+...... ..+.+|+.++|.|.+.+..|.+ .|+|||||+.+
T Consensus 328 ~~~~~~l~V~~~~~~~P~v~~~~~~--~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~ 386 (438)
T 1qgc_4 328 WGQGTVVTVSAAKTTPPSVYPLAPG--SAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSS 386 (438)
T ss_dssp BCCCEEEEECSSCCBCCEEEEECCC--GGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCS
T ss_pred eCCCEEEEEecCCCCCCeEEEcCcc--cccccCCcEEEEEEeccccCCCcEEEEecCCCCC
Confidence 45678999985 3344555432211 1357899999999998766888 99999998764
No 209
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=98.30 E-value=2.9e-06 Score=52.45 Aligned_cols=53 Identities=11% Similarity=0.111 Sum_probs=38.2
Q ss_pred EEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCC--CCc-eEEEEECCEEc
Q psy7728 9 TRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAK--PAA-KIVWYRGNTEL 63 (65)
Q Consensus 9 ~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~--P~~-~i~W~~~~~~l 63 (65)
+.|.|..+|....-... +....+.+|+.++|.|.+.+.. |++ .|.|+++|+.+
T Consensus 218 ~~l~V~~~~~~~~~~~~--~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i 273 (329)
T 3oq3_B 218 KILTVIPSQDHRFKLIL--DPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWI 273 (329)
T ss_dssp EEEEEECCCCCCEEEEC--CSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCB
T ss_pred EEEEEECCCCCCCceec--CCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeee
Confidence 67888887754221112 2346889999999999997653 377 89999998763
No 210
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=98.29 E-value=3.4e-07 Score=57.17 Aligned_cols=51 Identities=22% Similarity=0.308 Sum_probs=39.9
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCE
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNT 61 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~ 61 (65)
..+.|+|..+|..+.... ....+.+|+.++|.|.+..+.|.+.++||+++.
T Consensus 106 ~~~~l~V~~~p~~~~~~~----~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~ 156 (404)
T 3p3y_A 106 NRIRLQVSKSPLWPKENL----DPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM 156 (404)
T ss_dssp EEEEEEECCCCCCCCCCC----CCEEEETTSCEEECCCCCCCSSCCEEEEECTTS
T ss_pred eeEEEEEeccCccccCCC----CCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCc
Confidence 457888888876543321 225789999999999987788999999999874
No 211
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.29 E-value=6e-07 Score=47.51 Aligned_cols=30 Identities=17% Similarity=0.410 Sum_probs=25.0
Q ss_pred EeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 32 EIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 32 ~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+..|++++|+|.+.+ .|+ |+|+|||+++.
T Consensus 10 v~~~G~~v~L~C~~~g-~P~--i~W~kdg~~l~ 39 (82)
T 3r08_E 10 VSISGTSVELTCPLDS-DEN--LKWEKNGQELP 39 (82)
T ss_dssp EEEETTEEEEECSSCC-CSS--CEEEETTEECT
T ss_pred EEEcCCeEEEEEECCC-CCc--EEEEECCEECc
Confidence 5678999999999864 563 99999999874
No 212
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=98.28 E-value=9.7e-07 Score=50.21 Aligned_cols=34 Identities=18% Similarity=0.485 Sum_probs=28.8
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. +.|.+.++|||+|+.+.
T Consensus 14 ~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~ 47 (194)
T 2a38_A 14 SVVVLEGSTATFEAHIS-GFPVPEVSWFRDGQVIS 47 (194)
T ss_dssp CEEEETTSCEEEEEEEE-EESCCEEEEEESSSBCC
T ss_pred ceEEECCCEEEEEEEEE-ecCCCEEEEEECCEEcc
Confidence 35789999999999985 47889999999997653
No 213
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=98.28 E-value=2e-06 Score=48.59 Aligned_cols=34 Identities=21% Similarity=0.543 Sum_probs=29.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+.+ .|.+.++|||++..+.
T Consensus 11 ~~~v~~G~~v~l~C~~~~-~p~~~v~W~k~~~~~~ 44 (182)
T 1rhf_A 11 KLTVSQGQPVKLNCSVEG-MEEPDIQWVKDGAVVQ 44 (182)
T ss_dssp EEEEETTCCEEEEEEEES-CSSCCEEEEETTEECC
T ss_pred ceEEeCCCcEEEEEEEeC-CCCCeEEEEECCeecC
Confidence 357899999999999975 7999999999998764
No 214
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.28 E-value=8.4e-07 Score=46.77 Aligned_cols=33 Identities=27% Similarity=0.672 Sum_probs=28.3
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+ +.|.+.|+|||+++.+.
T Consensus 17 ~~~v~~G~~v~l~C~~--~~p~~~v~W~k~~~~l~ 49 (103)
T 2dku_A 17 NLQVEEKGTAVFTCKT--EHPAATVTWRKGLLELR 49 (103)
T ss_dssp CEEEETTSEEEEEEEC--SSCCSCCEEEESSCBCC
T ss_pred cEEEeCCCcEEEEEEe--CCCCCeEEEEeCCEECC
Confidence 4678999999999994 57889999999998763
No 215
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=98.28 E-value=1.2e-06 Score=52.59 Aligned_cols=51 Identities=16% Similarity=0.354 Sum_probs=37.9
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+.|+|..+|. +...+ ....+.+|+.++|.|.+.+ +|++.|+||++|..+
T Consensus 91 ~~~~l~v~~~~~---~~~~~--~~~~~~~g~~v~l~C~~~~-~p~~~v~W~~~~~~~ 141 (291)
T 1qz1_A 91 ATVNVKIFQKLM---FKNAP--TPQEFKEGEDAVIVCDVVS-SLPPTIIWKHKGRDV 141 (291)
T ss_dssp EEEEEEEECCSE---EEECC--SSEEEETTSCEEECCEEEC-SSCCEEEEEETTSCS
T ss_pred EEEEEEeecccc---ccCCC--CcccccCCCeEEEEEEecc-CCCCEEEEEECCEEc
Confidence 456777776663 33222 2357899999999999965 688999999998765
No 216
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.28 E-value=8.9e-08 Score=51.45 Aligned_cols=33 Identities=18% Similarity=0.527 Sum_probs=28.6
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.+.+|+.++|.|.+. +.|.+.|.|||+|+.+
T Consensus 23 ~~~v~~G~~v~L~C~~~-g~p~p~v~W~k~g~~l 55 (106)
T 1nct_A 23 SMTVYEGESARFSCDTD-GEPVPTVTWLRKGQVL 55 (106)
T ss_dssp CEEESSSSCEECCEEEE-CSSCCBCCBCSSSSCC
T ss_pred CEEEeCCCcEEEEEEEE-EcCCCEEEEEECCEEC
Confidence 35789999999999995 5799999999998765
No 217
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.28 E-value=1.5e-06 Score=50.74 Aligned_cols=34 Identities=29% Similarity=0.578 Sum_probs=30.0
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. +.|.+.|+|||+|+.+.
T Consensus 27 ~~~~~~G~~v~l~C~~~-g~p~p~i~W~~~g~~l~ 60 (215)
T 3mtr_A 27 AVYTWEGNQVNITCEVF-AYPSATISWFRDGQLLP 60 (215)
T ss_dssp EEEECTTCCEEEEEEEE-EESCCEEEEEETTEESS
T ss_pred eEEEECCCCEEEEEEEe-ecCCCEEEEEECCeECC
Confidence 47889999999999986 47899999999999874
No 218
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.27 E-value=2.1e-06 Score=50.28 Aligned_cols=45 Identities=22% Similarity=0.161 Sum_probs=34.4
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.++|.|+.+...|.+.. .+..++|+|.+.+ .|.+.|+||+||+.+
T Consensus 97 ~~~L~V~~~~~~P~i~~----------~~~~v~L~C~~~~-~p~~~~~W~~~g~~l 141 (182)
T 1hnf_A 97 IFDLKIQERVSKPKISW----------TCINTTLTCEVMN-GTDPELNLYQDGKHL 141 (182)
T ss_dssp EEEEEEECCCCCCEEEE----------ETTTTEEEEECSS-CSSCEEEEEESSCEE
T ss_pred EEEEEEcCcCCCCEEEE----------ccCcEEEEeEccC-CCCCEEEEEECCEEC
Confidence 46789988776666642 2346899999965 478999999999865
No 219
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=98.27 E-value=1.2e-06 Score=50.94 Aligned_cols=41 Identities=12% Similarity=0.238 Sum_probs=31.2
Q ss_pred CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 18 SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 18 ~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..|.|...+. ..+.+|+.++|.|.+. .|.+.+.|||+|+.+
T Consensus 7 ~~P~i~~~p~---~~v~~G~~v~L~C~~~--~~~~~~~w~k~g~~~ 47 (201)
T 1nkr_A 7 RKPSLLAHPG---PLVKSEETVILQCWSD--VMFEHFLLHREGMFN 47 (201)
T ss_dssp CCCEEEEESC---SEEETTCCEEEEEEES--SCCSEEEEEEESSSC
T ss_pred CCCeEEEEcC---CccCCCCcEEEEEecc--CCCCEEEEEECCCcC
Confidence 3456665443 3678999999999985 478899999998643
No 220
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=98.27 E-value=2.2e-06 Score=48.50 Aligned_cols=50 Identities=24% Similarity=0.420 Sum_probs=36.5
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEEC--CEEc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRG--NTEL 63 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~--~~~l 63 (65)
..+.|+|..+|.. ..... ..+.+|+.++|.|.+.+ +|++.++||++ +..+
T Consensus 86 ~~~~l~V~~~p~~---~~~~~---~~~~~g~~v~l~C~~~~-~p~~~v~W~~~~~~~~~ 137 (192)
T 2va4_A 86 KQAFLQVFVQPHI---IQLKN---ETTYENGQVTLVCDAEG-EPIPEITWKRAVDGFTF 137 (192)
T ss_dssp EEEEEEEEEEEEE---EEECC---EEECTTSEEEEEEEEEE-ESCCEEEEEETTTTEEE
T ss_pred eEEEEEEEccCcc---cccCc---ceEEeCCeEEEEEEecC-CCCCcEEEEeCCCCcee
Confidence 4567888887743 22222 36778999999999854 79999999998 5543
No 221
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=98.26 E-value=1.7e-06 Score=50.34 Aligned_cols=33 Identities=18% Similarity=0.367 Sum_probs=29.2
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+|+.++|.|.+. +.|.+.|+|||+|+.+.
T Consensus 16 ~~v~~G~~v~L~C~~~-g~p~~~v~W~k~~~~~~ 48 (212)
T 2yd6_A 16 QTGVSGGVASFICQAT-GDPRPKIVWNKKGKKVS 48 (212)
T ss_dssp EEEETTSCEEEEEEEE-EESCCEEEEEETTEECC
T ss_pred eEEecCCeEEEEEEEe-eCCCCEEEEEECCcCCC
Confidence 5788999999999996 57999999999998764
No 222
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=98.26 E-value=2.7e-06 Score=48.54 Aligned_cols=33 Identities=24% Similarity=0.484 Sum_probs=27.0
Q ss_pred EEeec-CCcEEEEEEecCCCCC--ceEEEEECCEEcc
Q psy7728 31 IEIRE-NQEITLECLVKNAKPA--AKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~-G~~~~L~C~~~~~~P~--~~i~W~~~~~~l~ 64 (65)
+.+.+ |+.++|.|.+.+. |. +.++|||+|..+.
T Consensus 12 ~~v~~~G~~v~l~C~~~~~-~~~~~~v~W~~~~~~~~ 47 (190)
T 2wv3_A 12 VIIRDSLLPVTLQCNLTSS-SHTLMYSYWTKNGVELT 47 (190)
T ss_dssp EECCCSSSCEEEEEEEEEC-SSCEEEEEEEETTEECT
T ss_pred EEEccCCceEEEEEEeccC-CCCceEEEEEECCEECc
Confidence 45666 9999999998654 54 8999999999874
No 223
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=98.26 E-value=9e-07 Score=58.97 Aligned_cols=49 Identities=10% Similarity=0.205 Sum_probs=38.4
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.|+|..+|..+ +....+.+|+.++|.|.+.+++|.+.|+|||+|+.+
T Consensus 221 ~~~l~V~~~p~~~-------p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l 269 (527)
T 3qs9_E 221 LFTIDLNQTPQTT-------LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKAL 269 (527)
T ss_dssp CEEEESSSCCCCS-------CCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCC
T ss_pred EEEEEEeccCccC-------CCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEEC
Confidence 4677777766531 124578999999999999757899999999998754
No 224
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.26 E-value=4.1e-07 Score=50.37 Aligned_cols=33 Identities=15% Similarity=0.325 Sum_probs=27.9
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.+.+|+.++|.|.+. +.|.+.|+|||+++.+
T Consensus 30 ~~~v~~G~~v~L~C~~~-g~P~p~i~W~k~~~~~ 62 (137)
T 3qr2_A 30 SQQRWVGGSVELHCEAV-GSPVPEIQWWFEGQGP 62 (137)
T ss_dssp CEEEETTSCEEEEEEEE-CSSCCEEEEEEEESST
T ss_pred CEEEeCCCCEEEEEEEe-eecCCeEEEEECCCCc
Confidence 46789999999999985 4799999999987543
No 225
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.26 E-value=2.7e-07 Score=55.02 Aligned_cols=55 Identities=22% Similarity=0.384 Sum_probs=38.4
Q ss_pred cCCCEEEEEEc---------CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEE-CCEEc
Q psy7728 5 YGPRTRLYQFA---------PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYR-GNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~---------pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~-~~~~l 63 (65)
++..+.|+|.. +| .+.|.. +. ...+.+|+.++|.|.+.+..|. +.|+|+| ||+.+
T Consensus 109 ~~~~~~L~V~~~~~~l~~~~~p-~~~v~~-p~--~~~v~~g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l 174 (230)
T 1ypz_F 109 FAEGTKLIVIPSDKRLDADISP-KPTIFL-PS--VAETNLHKTGTYLCLLEAFFPDVIRVYWKEKDGNTI 174 (230)
T ss_dssp ECSCEEEEEECCCTTCCSCCSC-CCCEEC-CC--HHHHHHHSCEEEEEEEEEESSCCCEEEEECTTSSCB
T ss_pred cCCCEEEEEecccccCcccCCC-CceEEC-CC--chhhccCCcceEEEEEeeecCCCeEEEEEccCCeEc
Confidence 56778999982 33 334432 11 1134578999999999887786 6999999 87654
No 226
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.26 E-value=3.5e-07 Score=48.32 Aligned_cols=32 Identities=16% Similarity=0.421 Sum_probs=27.5
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+.+.+|+.++|.|.+.+ .| +.++|||||+++.
T Consensus 18 ~~v~~G~~v~l~C~~~~-~~-~~v~W~k~g~~i~ 49 (101)
T 2edk_A 18 QQVFVGDRVEMAVEVSE-EG-AQVMWMKNGVELT 49 (101)
T ss_dssp EEEESSCCCBCCEEESC-SS-CCCEEEESSCBCC
T ss_pred eEEcCCCCEEEEEEEeC-CC-CEEEEEECCEECC
Confidence 57899999999999965 56 8999999998763
No 227
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.26 E-value=1.5e-06 Score=52.31 Aligned_cols=56 Identities=20% Similarity=0.290 Sum_probs=37.5
Q ss_pred cCCCEEEEEEcCCCc----------cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEE--CCE
Q psy7728 5 YGPRTRLYQFAPPSS----------IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR--GNT 61 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~----------~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~--~~~ 61 (65)
++..+.|+|..+|.. ........+..+.+.+|+.++|.|.+.+ .|++.|.||| +|+
T Consensus 113 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~-~~~~~v~W~k~~~g~ 180 (257)
T 1f3r_B 113 WGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQ-NINNYLAWYQQKLGE 180 (257)
T ss_dssp ECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSS-CCBTCEEEEEECTTS
T ss_pred cCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECC-cCCCcEEEEEECCCC
Confidence 456788999876521 1111111223456899999999999865 5667999999 554
No 228
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=98.25 E-value=8.9e-07 Score=50.30 Aligned_cols=35 Identities=23% Similarity=0.477 Sum_probs=29.7
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+.+|+.++|.|.+.+ .|.+.|+|||+|..+.
T Consensus 15 ~~~~~~~G~~v~l~C~~~~-~p~~~i~W~~~~~~~~ 49 (192)
T 2iep_A 15 ETVDALVEEVATFMCAVES-YPQPEISWTRNKILIK 49 (192)
T ss_dssp CEEEEETTSCEEEECCEEE-ESCCEEEEEETTEECC
T ss_pred cceeeeCCCcEEEEeeCCC-CCCCeEEEEECCEEcc
Confidence 3467899999999999864 7889999999998763
No 229
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=98.25 E-value=1.5e-06 Score=54.40 Aligned_cols=35 Identities=14% Similarity=0.299 Sum_probs=31.4
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+.++.|.+.|+|||||..+.
T Consensus 30 ~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~ 64 (403)
T 3laf_A 30 DAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILA 64 (403)
T ss_dssp CEEECTTCCEEECCEEECTTCCCEEEEEETTEECC
T ss_pred ceEEecCCcEEEEEEcCCCCCCceEEEEECCEECc
Confidence 46789999999999998888999999999998863
No 230
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=98.25 E-value=1.8e-06 Score=49.10 Aligned_cols=33 Identities=18% Similarity=0.510 Sum_probs=26.8
Q ss_pred EEeecCCcEEEEEEecCCCCCce-EEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAK-IVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~-i~W~~~~~~l~ 64 (65)
..+.+|+.++|.|.+.+ .|.+. ++|||+|+.+.
T Consensus 17 ~~v~~G~~v~L~C~~~~-~p~~~~~~W~~~~~~~~ 50 (175)
T 1fnl_A 17 YSVLEKDSVTLKCQGAY-SPEDNSTQWFHNESLIS 50 (175)
T ss_dssp SEEETTCCEEEEEECCC-BTTBCCCEEEETTEEEE
T ss_pred eeeeCCCcEEEEeeCCC-CCCCcceEEEECCEEcc
Confidence 36889999999999865 45554 89999998764
No 231
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.25 E-value=2.6e-06 Score=51.53 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=31.1
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.+|+.++|.|.+.+++|.+.++|||+|+++.
T Consensus 116 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~ 150 (312)
T 2y23_A 116 AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIF 150 (312)
T ss_dssp EEEECSSSCEEEEEEESCCCSSCEEEEEETTEEEC
T ss_pred ceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECe
Confidence 35789999999999998688999999999998864
No 232
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.24 E-value=3e-06 Score=51.22 Aligned_cols=35 Identities=11% Similarity=0.362 Sum_probs=31.3
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|+|....++|.+.|+|||||+++.
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~ 44 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTE 44 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECT
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECC
Confidence 46789999999999998789999999999999874
No 233
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=98.24 E-value=4.6e-07 Score=55.46 Aligned_cols=53 Identities=17% Similarity=0.335 Sum_probs=38.8
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
...+.|+|..+|..+... .. ..+.+|+...+.|.+.+++|++.|+||+++..+
T Consensus 107 ~~~~~l~v~~~P~~~~~~-~~----~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~ 159 (313)
T 4fqp_A 107 SVDIWLRVLAKPQNTAEV-QK----VQLTGEPVPMARCVSTGGRPPAQITWHSDLGGM 159 (313)
T ss_dssp EEEEEECCBBCCEEEEEE-CC----BCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCE
T ss_pred eeeeeeeeccCCcceecc-cc----eEeecCceEEEEEEccCccCCcEEEeecCCccc
Confidence 344677777787653322 11 246778888999999889999999999998654
No 234
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.24 E-value=6.8e-07 Score=47.54 Aligned_cols=32 Identities=16% Similarity=0.595 Sum_probs=27.0
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+.+.+|+.++|.|.+.+ .|.+ ++|||||+.+.
T Consensus 18 ~~v~~G~~v~l~C~~~~-~~~~-v~W~k~g~~~~ 49 (106)
T 2dlt_A 18 LTVKAAEQAVFKCEVSD-EKVT-GKWYKNGVEVR 49 (106)
T ss_dssp EEEESSCCEECCCEESC-SSCE-EEEEESSCBCC
T ss_pred eEEeCCCeEEEEEEEcC-CCcc-eEEEcCCEECc
Confidence 57899999999999964 5666 99999998763
No 235
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.24 E-value=1.6e-06 Score=45.12 Aligned_cols=32 Identities=25% Similarity=0.585 Sum_probs=26.8
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+.+ .+.|+|||+|..+.
T Consensus 10 ~~~v~~G~~~~l~C~~~~---~p~v~W~k~g~~~~ 41 (95)
T 4hwu_A 10 AYVVAPGESLELQCMLKD---AAVISWTKDGVHLG 41 (95)
T ss_dssp EEEECTTSCEEEECCCCT---TCEEEEEETTEEEC
T ss_pred cEEECCCCEEEEEEEeCC---CCEEEEEECCEECC
Confidence 357899999999999854 57999999998763
No 236
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.24 E-value=2e-06 Score=48.57 Aligned_cols=30 Identities=23% Similarity=0.482 Sum_probs=25.9
Q ss_pred EEeecCCcEEEEEEecCC--CCCceEEEEECC
Q psy7728 31 IEIRENQEITLECLVKNA--KPAAKIVWYRGN 60 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~--~P~~~i~W~~~~ 60 (65)
+.+.+|+.++|.|.+.+. .|.|.|+||||.
T Consensus 17 v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk 48 (126)
T 2dav_A 17 GTVKVGEDITFIAKVKAEDLLRKPTIKWFKGK 48 (126)
T ss_dssp CEEETTCCEEEEEEEECCCSSSCCEEEEEESS
T ss_pred eEEeCCCCEEEEEEEeccCCCCCCcEEEeeCc
Confidence 478999999999998653 599999999974
No 237
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.24 E-value=3.7e-06 Score=49.18 Aligned_cols=54 Identities=15% Similarity=0.255 Sum_probs=36.5
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCC-CCCceEEEEECCEE
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNA-KPAAKIVWYRGNTE 62 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~-~P~~~i~W~~~~~~ 62 (65)
..+.|.|.. +..+.+...+. ..+.+.+|+.++|.|.+.+. .|++.|+|+++|+.
T Consensus 93 ~~~~l~v~~-~~~p~~~~~~~-~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~ 147 (213)
T 2x1w_L 93 IMYIVVVVG-YRIYDVVLSPS-HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSK 147 (213)
T ss_dssp CCEEEEECB-CCEEEEEEESC-SCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSS
T ss_pred EEEEEEEeC-CcccceEEcCC-CCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCc
Confidence 346777754 33344433232 23578999999999999754 34568999999865
No 238
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=98.23 E-value=5.3e-06 Score=52.88 Aligned_cols=54 Identities=19% Similarity=0.309 Sum_probs=40.6
Q ss_pred CCCEEEEEEcC-CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCC--CceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAP-PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKP--AAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~p-P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P--~~~i~W~~~~~~l~ 64 (65)
+.++.|+|... +..|.+.. + ..+.+|+.++|.|.+.+..| .+.++|+++|+.+.
T Consensus 177 s~~~~l~v~~~~~~~p~~~~-~----~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~ 233 (450)
T 1z7z_I 177 SAPYQLQTFVLPATPPQLVS-P----RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLN 233 (450)
T ss_dssp CCCEECEECCCCSSCCEEEC-C----SEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECC
T ss_pred cCccceeeeccCCCCCEecC-c----eeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCC
Confidence 35677888765 34445433 2 27899999999999987657 79999999998764
No 239
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=98.23 E-value=4e-06 Score=49.52 Aligned_cols=56 Identities=14% Similarity=0.121 Sum_probs=40.4
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-c----eEEEEECCEEcc
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-A----KIVWYRGNTELK 64 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~----~i~W~~~~~~l~ 64 (65)
.+..+.|.|..++..+.+...+. ..+.+|+.++|+|.+.+ .|. + .+.||++++.+.
T Consensus 157 ~~~~~~l~V~~~~~~p~~~~~~~---~~~~~g~~~~l~C~~~~-~p~~p~~~~~~~w~~~~~~~~ 217 (262)
T 3rjd_A 157 TSAGISVTVKELFPAPVLNASVT---SPLLEGNLVTLSCETKL-LLQRPGLQLYFSFYMGSKTLR 217 (262)
T ss_dssp EEECEEEEEECSSCCCEEEESSC---SSEETTCCEEEEEECCC-CCC-----EEEEEEETTEEEE
T ss_pred cccceEEEeccCCCCCeEeecCc---eeecCCCeEEEEeEccc-CCCCCCccEEEEEEeCCcEec
Confidence 44567899987655666665443 25789999999999965 453 4 379999998764
No 240
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=98.23 E-value=8.5e-07 Score=55.99 Aligned_cols=30 Identities=30% Similarity=0.659 Sum_probs=26.6
Q ss_pred ecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+|+.+.|.|.+. |+|.|.|+|||||+++.
T Consensus 21 ~eg~~v~L~C~~~-g~P~p~i~W~k~g~~l~ 50 (384)
T 3kld_A 21 SEEKKVKLSCEVK-GNPKPHIRWKLNGTDVD 50 (384)
T ss_dssp CSCSEEEECCEEE-EESCCEEEEEETTEECC
T ss_pred CCCCeEEEEeEec-CCCCCEEEEEECCEECc
Confidence 5899999999995 58999999999999873
No 241
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.23 E-value=4.5e-06 Score=49.56 Aligned_cols=52 Identities=12% Similarity=0.249 Sum_probs=34.4
Q ss_pred cCCCEEEEEEcCCC-----------ccEEEeCCCCCeEEeecCCcEEEEEEecCCC-CCceEEEEEC
Q psy7728 5 YGPRTRLYQFAPPS-----------SIEIVGHPSNSKIEIRENQEITLECLVKNAK-PAAKIVWYRG 59 (65)
Q Consensus 5 ~~~~~~L~V~~pP~-----------~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~ 59 (65)
++..+.|+|..+|. .+.+...+. ..+.+|+.++|.|.+.+.. |.+.+.|||+
T Consensus 103 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 166 (247)
T 1svz_A 103 FGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGP---ELKKPGETVKISCKATNYAFTDYSMHWVKQ 166 (247)
T ss_dssp ECCCEEEEEC---------------CCEEEECCC---EEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ECCCEEEEEECCccccccccccccCceEEeCCCc---eeecCCCcEEEEEEEcCcccCCcEEEEEEe
Confidence 56678999988653 223332222 3589999999999997653 3579999996
No 242
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=98.23 E-value=1.8e-06 Score=49.07 Aligned_cols=34 Identities=18% Similarity=0.328 Sum_probs=26.1
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+.+.+|+.++|.|.+.+..++..++|||++..+.
T Consensus 14 ~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~ 47 (176)
T 1f2q_A 14 NRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSE 47 (176)
T ss_dssp SEEETTCCEEEECCTTCC----CCEEEETTEECS
T ss_pred cceecCCcEEEEEeCCCCCCcceEEEEECCeECC
Confidence 4689999999999997654445799999998864
No 243
>3jts_B Beta-2-microglobulin; alpha helix, beta sheet, beta barrel, immune response, MHC I membrane, transmembrane, disease mutation; 2.80A {Homo sapiens}
Probab=98.22 E-value=2.4e-06 Score=47.76 Aligned_cols=32 Identities=13% Similarity=0.341 Sum_probs=27.3
Q ss_pred eecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
...|+.++|+|.+.+..|+ .+|+|+|||+++.
T Consensus 35 ~~~g~~~~L~C~~~gFyP~~I~v~W~knG~~~~ 67 (119)
T 3jts_B 35 AENGKSNFLNCYVSGFHPSDIEVDLLKNGERIE 67 (119)
T ss_dssp CCTTSCEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred ccCCCcEEEEEEEeCccCCCEEEEEEECCEECC
Confidence 3567789999999998887 4899999999874
No 244
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=98.22 E-value=1.3e-06 Score=56.79 Aligned_cols=56 Identities=14% Similarity=0.095 Sum_probs=41.3
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCce-EEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAK-IVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~-i~W~~~~~~l~ 64 (65)
...+.|+|..+|.... .. .......+.+|+.++|.|.+ .++|.+. |+|||+|+++.
T Consensus 300 ~~~~~l~V~~~p~~~~-~~-~~~~~~~v~~G~~v~l~C~~-~g~P~p~~v~W~k~g~~~~ 356 (524)
T 2ec8_A 300 NVTTTLEVVDKGFINI-FP-MINTTVFVNDGENVDLIVEY-EAFPKPEHQQWIYMNRTFT 356 (524)
T ss_dssp EEEEEEEEESSCEEEE-EE-SSCSEEEECTTCCEEEEEEE-EEESCCCEEEEESSSCBCS
T ss_pred EEEEEEEEeccCceEe-ec-CCCceEEEcCCCcEEEEEEE-eecCCCcEEEEEECCeecc
Confidence 3467899998874322 11 11235689999999999998 4578888 99999998764
No 245
>3o81_A Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, MHC class I molecule from B21 chicken, immune SYST; 2.00A {Gallus gallus}
Probab=98.22 E-value=2.4e-06 Score=47.75 Aligned_cols=31 Identities=13% Similarity=0.350 Sum_probs=26.8
Q ss_pred ecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
..|+.++|+|.+.+..|+ ..|+|+|||+++.
T Consensus 36 ~~g~~~~L~C~v~gFyP~~I~v~W~knG~~~~ 67 (119)
T 3o81_A 36 SAGTKNVLNCFAAGFHPPKISITLMKDGVPME 67 (119)
T ss_dssp CTTSCEEEEEEEEEESSSCCEEEEEETTEECT
T ss_pred cCCCcEEEEEEEecccCCCcEEEEEECCEECC
Confidence 457789999999998887 5899999999874
No 246
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.22 E-value=4.3e-06 Score=47.52 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=29.0
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.+|+.++|.|.+. ++|.+.|+||+++..+.
T Consensus 122 ~~~~~~g~~~~l~C~~~-g~p~p~v~W~~~~~~~~ 155 (201)
T 3s97_C 122 DVYALMGQNVTLECFAL-GNPVPDIRWRKVLEPMP 155 (201)
T ss_dssp CEEEETTCCEEEEEEEE-EESCCEEEEEETTBCCC
T ss_pred ceEEecCCcEEEEEEcc-CCCCCceEEEeCCCcCC
Confidence 35789999999999985 57999999999987653
No 247
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=98.22 E-value=5.7e-07 Score=56.16 Aligned_cols=48 Identities=8% Similarity=0.161 Sum_probs=37.1
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCC----CCCceEEEEECCEEc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNA----KPAAKIVWYRGNTEL 63 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~----~P~~~i~W~~~~~~l 63 (65)
.+.|.|..+|..+ ..+.+.+|+.++|.|.+.++ +|.+.|+|+++|..+
T Consensus 171 ~~~l~v~~~p~~~--------~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~ 222 (363)
T 1wio_A 171 KIDIVVLAFQKAS--------SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASS 222 (363)
T ss_dssp CCEECEECCSCSE--------EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCC
T ss_pred EEEEEEecCCCCC--------CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCc
Confidence 4577787777643 22468899999999988654 788999999998764
No 248
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.22 E-value=1e-06 Score=52.21 Aligned_cols=56 Identities=20% Similarity=0.315 Sum_probs=36.5
Q ss_pred cCCCEEEEEE-cCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEECCEE
Q psy7728 5 YGPRTRLYQF-APPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~-~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~~~~ 62 (65)
++..+.|+|. .++..|.+..... ...+.+|+.++|.|.+.+..| +..++|+++|+.
T Consensus 117 ~~~~~~l~V~~~~~~~P~v~~~~~--~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~ 174 (232)
T 3qhz_H 117 WGRGTLVTVSSASTKGPSVFPLAP--SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 174 (232)
T ss_dssp ECCCEEEEECSSCCBCCEEEEECC---------CEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred eCCCeEEEEecCCCCCCEEEEecc--cccccCCCcEEEEEEEeeEeCCCeEEEEEECCEe
Confidence 5677899998 4556667653221 124567999999999988776 456889999863
No 249
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.22 E-value=3.1e-06 Score=52.21 Aligned_cols=30 Identities=27% Similarity=0.635 Sum_probs=25.6
Q ss_pred cCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 35 ENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 35 ~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
+|+.++|.|.+.+..|++ .|+|||||+++.
T Consensus 233 ~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~ 263 (323)
T 2wqr_A 233 SRDKRTLACLIQNFMPEDISVQWLHNEVQLP 263 (323)
T ss_dssp CTTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred cCCcEEEEEEeeeeeCCCcEEEEEECCEECC
Confidence 499999999998766654 899999999874
No 250
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.21 E-value=1.9e-06 Score=55.38 Aligned_cols=56 Identities=18% Similarity=0.331 Sum_probs=40.0
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEECCEE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~ 62 (65)
++..+.|+|.. ++..|.+...... ..+.+|+.++|.|.+.+..|. +.|+|||+++.
T Consensus 117 ~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~ 174 (457)
T 1hzh_H 117 WGKGTTVIVSSASTKGPSVFPLAPS--SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 174 (457)
T ss_dssp CCCCEEEEECSCCCBCCEEEEECCC--SCCCTTCCEEEEEEEESBBSCCCEEEETTTTBC
T ss_pred ECCcEEEEecCCCCCCCeEEecCcc--ccccCCCcEEEEEEEeEEeCCCeEEEEEeCCEe
Confidence 45678999986 3334455432211 136799999999999877685 89999999854
No 251
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.21 E-value=4.6e-06 Score=49.11 Aligned_cols=53 Identities=17% Similarity=0.360 Sum_probs=37.5
Q ss_pred cCCCEEEEEEcCCCc---------cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 5 YGPRTRLYQFAPPSS---------IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~---------~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
++..+.|.|..++.. +.+... +..+.+.+|+.++|.|.+.+ .|.+.|.|||++
T Consensus 104 ~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~-~p~~~i~W~k~~ 165 (238)
T 2p1y_A 104 FGHGTKLSVLGSADDAKKDAAKKDGQVRQS--PQSLTVWEGETAILNCSYEN-SAFDYFPWYQQF 165 (238)
T ss_dssp ECCCEEEEEECCCHHHHHHHHHHHTCCEEE--CSEEEEETTSCEEEEEECCC-TTCCEEEEEEEC
T ss_pred eCCCeEEEEeccCCCCcCCcccceeeEEcc--CceEEEeCCCeEEEEEEEec-CCCCcEEEEEEC
Confidence 446788999876541 122211 23457899999999999855 678999999963
No 252
>1bii_B Beta-2 microglobulin, MHC class I H-2DD; complex (MHC I/peptide), major histocompatibility complex class I DD, transmembrane, glycoprotein; 2.40A {Mus musculus} SCOP: b.1.1.2
Probab=98.21 E-value=1.6e-06 Score=48.37 Aligned_cols=32 Identities=16% Similarity=0.339 Sum_probs=27.2
Q ss_pred eecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
...|+.++|.|.+.+.+|+. +|+|+|||+++.
T Consensus 35 ~~~~~~~tL~C~a~gFyP~~I~v~W~knG~~i~ 67 (119)
T 1bii_B 35 PENGKPNILNCYVTQFHPPHIEIQMLKNGKKIP 67 (119)
T ss_dssp CCSSSCEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred ccCCCCEEEEEEEEeecCCCeEEEEEECCEECC
Confidence 35677899999999988864 899999999874
No 253
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.20 E-value=7e-07 Score=54.79 Aligned_cols=51 Identities=10% Similarity=0.165 Sum_probs=36.2
Q ss_pred CCCEEEEEEcCC-CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEE
Q psy7728 6 GPRTRLYQFAPP-SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR 58 (65)
Q Consensus 6 ~~~~~L~V~~pP-~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~ 58 (65)
...+.|+|...+ ..|.+.. ..+....+.+|+.++|.|.+. ++|.+.|+|||
T Consensus 207 ~~~~~l~V~~~~~~~p~~~~-~~~~~~~~~~G~~v~l~C~~~-g~p~p~v~W~~ 258 (334)
T 1ry7_B 207 RQTYTLDVLERSPHRPILQA-GLPANQTAVLGSDVEFHCKVY-SDAQPHIQWLK 258 (334)
T ss_dssp EEEEEEEEECCCCSSCBCCT-TCSCCEEEESSCCEEECCCCB-CSSCEEEEEEE
T ss_pred EEEEEEEEecCCCCCCceEe-cCCCceEEeCCCCEEEEEEEe-cCCCCeEEEEE
Confidence 345788888743 3333322 122345789999999999995 58999999999
No 254
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=98.20 E-value=2.6e-06 Score=48.35 Aligned_cols=34 Identities=21% Similarity=0.375 Sum_probs=28.4
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEE-CCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYR-GNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~-~~~~l~ 64 (65)
..+.+|+.++|.|.+.+..|.+.|+||| ||+.+.
T Consensus 12 ~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~ 46 (191)
T 1epf_A 12 GEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLS 46 (191)
T ss_dssp EEEETTCCEEEEEEECCCSCCCEEEEECTTSCEEC
T ss_pred cEEcCCCCEEEEEECCCCCCCceEEEEeCCCcccc
Confidence 4678999999999997755589999999 887653
No 255
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.20 E-value=3.5e-06 Score=51.46 Aligned_cols=53 Identities=11% Similarity=0.279 Sum_probs=36.2
Q ss_pred cCCCEEEEEEcCCC------------ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEE--CCE
Q psy7728 5 YGPRTRLYQFAPPS------------SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR--GNT 61 (65)
Q Consensus 5 ~~~~~~L~V~~pP~------------~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~--~~~ 61 (65)
++..+.|+|..+|. .+.+... +..+.+.+|+.++|.|.+.+ .| +.|.||| +|+
T Consensus 136 ~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~v~~G~~v~L~C~~~~-~~-~~v~W~k~~~g~ 202 (282)
T 1qok_A 136 WGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQS--PAIMSASPGEKVTITCSASS-SV-SYMHWFQQKPGT 202 (282)
T ss_dssp ECCCEEEEEEC---------------CCCEEEE--CSEEEECTTCCEEEEEEESS-CC-SCCEEEEECTTS
T ss_pred eCCCEEEEEecCCcccCCccCCCCccceEEecC--CCEEEEcCCCcEEEEEEecC-CC-ceEEEEEECCCC
Confidence 45678999998763 2223221 23457899999999999965 46 8999999 554
No 256
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.20 E-value=8.6e-07 Score=50.53 Aligned_cols=30 Identities=10% Similarity=0.076 Sum_probs=26.4
Q ss_pred EeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 32 EIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 32 ~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
.+.+|+.++|.|.+.+ .|.+.++||+++..
T Consensus 108 ~v~~g~~~~l~C~~~~-~p~~~v~W~~~~~~ 137 (184)
T 2ny1_B 108 HLLQGQSLTLTLESPP-GSSPSVQCRSPRGK 137 (184)
T ss_dssp EEETTCCEEEEEECCT-TCCCEEEEECTTSC
T ss_pred eeecCCCEEEEEEcCC-CCCCEEEEEeCCCc
Confidence 6789999999999966 69999999999754
No 257
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=98.20 E-value=1.8e-07 Score=56.73 Aligned_cols=57 Identities=12% Similarity=0.173 Sum_probs=38.2
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
...+.|+|.++|....-........+.+.+|+.++|.|.+. ++|.+.|+|+++++.+
T Consensus 89 ~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~~~~~~~ 145 (305)
T 2nzi_A 89 SGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFS-GKPDPVITWQKGQDLI 145 (305)
T ss_dssp EEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEE-EESCCEEEEEESSSBC
T ss_pred cceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEEC-CCCCCEEEEEECCEEC
Confidence 44577888776532100000011235788999999999995 5799999999998765
No 258
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=98.20 E-value=4.1e-06 Score=54.98 Aligned_cols=51 Identities=12% Similarity=0.171 Sum_probs=39.5
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCE
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNT 61 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~ 61 (65)
...+.|+|..+|.. . .....+.+.+|+.++|.|.+.++.|++.+.|||++.
T Consensus 102 ~~~~~l~V~~~p~~---~--~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~ 152 (585)
T 2ocw_A 102 SFDVSLEVSQGPGL---L--NDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIG 152 (585)
T ss_pred eEEEEEEEecCccc---c--CCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCC
Confidence 34578889888753 2 122346789999999999998777888999999875
No 259
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.20 E-value=2.6e-06 Score=48.55 Aligned_cols=32 Identities=16% Similarity=0.390 Sum_probs=27.2
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+.+|+.+.+.|.+. +.|+|.|+|||+++.+
T Consensus 128 ~~~~~~~~~~~~c~~~-g~p~p~i~W~~~~~~~ 159 (218)
T 4frw_A 128 LEEGQGLTLAASCTAE-GSPAPSVTWDTEVKGT 159 (218)
T ss_dssp EETTCCSEEEEEEEEE-EBSCCEEEEEESSCCE
T ss_pred eeeeeccccceeeecc-CCcCceEEEEECCccc
Confidence 4678899999999985 5799999999998654
No 260
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.19 E-value=1.5e-06 Score=50.85 Aligned_cols=31 Identities=13% Similarity=0.469 Sum_probs=26.5
Q ss_pred ecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
.+|+.++|.|.+.+..|+ +.|+|+|||+++.
T Consensus 122 ~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 153 (207)
T 2vol_A 122 MAKDKVSLTCMITDFFPEDITVEWESNGQPAE 153 (207)
T ss_dssp GSSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred hcCCceEEEEEEeeEECCCCEEEEEECCEecc
Confidence 369999999999887776 5999999999864
No 261
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.19 E-value=4.3e-07 Score=47.94 Aligned_cols=31 Identities=19% Similarity=0.523 Sum_probs=26.2
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
+.+.+|+.++|.|.+.+ .| +.|+|||++..+
T Consensus 13 ~~v~~G~~v~L~C~~~g-~p-p~i~W~k~g~~~ 43 (99)
T 2cr3_A 13 FLVHPGDLLQLRCRLRD-DV-QSINWLRDGVQL 43 (99)
T ss_dssp CCBCTTSCEEEECCCCS-SC-CEEEEEESSSBC
T ss_pred eEEeCCCcEEEEEEecC-CC-CeEEEEECCEEC
Confidence 36789999999999865 56 699999999765
No 262
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.19 E-value=2.8e-06 Score=51.29 Aligned_cols=52 Identities=10% Similarity=0.236 Sum_probs=36.3
Q ss_pred cCCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC----ceEEEEE--CCE
Q psy7728 5 YGPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA----AKIVWYR--GNT 61 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~----~~i~W~~--~~~ 61 (65)
++..+.|+|..+|. +... +..+.+.+|+.++|.|.+.+..++ +.|.||| +|+
T Consensus 110 ~~~~~~L~V~~~~~---v~~~--p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~ 167 (256)
T 1nqb_A 110 WGQGTTVTVSSDIE---LTQT--PLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQ 167 (256)
T ss_dssp ECCCEEEEECCCCC---EEEE--CSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTS
T ss_pred EcCceeeeeccccc---EEec--CcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCC
Confidence 45567888886653 2211 234578999999999999765443 4999999 554
No 263
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.19 E-value=1.4e-06 Score=51.39 Aligned_cols=31 Identities=19% Similarity=0.507 Sum_probs=26.5
Q ss_pred ecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
.+|+.++|.|.+.+.+|++ .|+|+|||+++.
T Consensus 130 ~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 161 (218)
T 2rgs_A 130 LSRKDVSLTCLVVGFNPGDISVEWTSNGHTEE 161 (218)
T ss_dssp TTSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred hcCCceEEEEEEEeeeCCCcEEEEEECCEecc
Confidence 3599999999998877775 999999998764
No 264
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=98.19 E-value=2.6e-06 Score=48.33 Aligned_cols=33 Identities=27% Similarity=0.625 Sum_probs=29.1
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.+.+|+.++|.|.+.+ .|.+.++|||++..+
T Consensus 16 ~~~v~~G~~v~l~C~~~~-~p~~~v~W~~~~~~~ 48 (197)
T 3lcy_A 16 DVTTKLGEAAQLSCQIVG-RPLPDIKWYRFGKEL 48 (197)
T ss_dssp CEEEETTSEEEEEEEEEE-ESCCEEEEEETTEEE
T ss_pred ceEEeCCCcEEEEEEEec-CCCCEEEEEECCEEC
Confidence 467899999999999954 789999999999876
No 265
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.19 E-value=4.7e-06 Score=50.62 Aligned_cols=52 Identities=15% Similarity=0.233 Sum_probs=33.7
Q ss_pred cCCCEEEEEEcCCC------------ccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEEC
Q psy7728 5 YGPRTRLYQFAPPS------------SIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRG 59 (65)
Q Consensus 5 ~~~~~~L~V~~pP~------------~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~ 59 (65)
++..+.|+|..+|. ...+... ..+.+.+|+.++|.|.+.+..| .+.|.|||+
T Consensus 109 ~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p---~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 173 (276)
T 3auv_A 109 FGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVES---GGGLVQPGGSLRLSCAASGFTISDYWIHWVRQ 173 (276)
T ss_dssp CCCCEEEEC-----------------CCEEEEE---CCEEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred ccCCEEEEEecCCCccccccccccCcceEEECC---CceEecCCCeEEEEEEecCccCCCCEEEEEEc
Confidence 45668899987653 1223221 2357899999999999976543 589999996
No 266
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=98.18 E-value=3.9e-06 Score=49.16 Aligned_cols=34 Identities=21% Similarity=0.450 Sum_probs=29.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. +.|.+.|+|||++..+.
T Consensus 27 ~~~v~~G~~v~L~C~~~-~~p~~~v~W~~~~~~~~ 60 (218)
T 3k0w_A 27 SKAVLAGQFVKLCCRAT-GHPFVQYQWFKMNKEIP 60 (218)
T ss_dssp CEEEETTSBEEEECEET-TTTSSEEEEEETTEECT
T ss_pred CeEEeCCCcEEEEeeec-CCCCCEEEEEECCEECC
Confidence 35789999999999995 57999999999998864
No 267
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=98.18 E-value=3.6e-06 Score=51.99 Aligned_cols=56 Identities=14% Similarity=0.107 Sum_probs=38.8
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEec----CCCCCceEEEEECCEEcc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVK----NAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~----~~~P~~~i~W~~~~~~l~ 64 (65)
.+.|+|..+|...... ...+....+.+|+.++|.|.+. .+.|.+.|+|||||+++.
T Consensus 108 ~~~l~V~~~~~~~~~~-~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~ 167 (349)
T 4dep_C 108 AFPLEVVQKDSCFNSP-MKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQ 167 (349)
T ss_dssp EEEEEEECCCTTSCCS-CCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECC
T ss_pred EEEEEEecCCcccCcc-cccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECC
Confidence 4678888866432111 0112234678999999999852 447999999999999874
No 268
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.18 E-value=1e-05 Score=49.12 Aligned_cols=52 Identities=13% Similarity=0.234 Sum_probs=36.0
Q ss_pred cCCCEEEEEEcCCC-----------------ccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEEC
Q psy7728 5 YGPRTRLYQFAPPS-----------------SIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRG 59 (65)
Q Consensus 5 ~~~~~~L~V~~pP~-----------------~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~ 59 (65)
++..+.|+|..+|. .+.+...+. ..+.+|+.++|.|.+.+..+ .+.|.|||+
T Consensus 108 ~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 177 (264)
T 2gjj_A 108 FGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGP---EVVKTGASVKISCKASGYSFTGYFINWVKK 177 (264)
T ss_dssp ECCCEEEEEECC-------------------CCEEEECCC---EEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred ecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCC---EEEcCCCcEEEEEEEeCCccCCeEEEEEEE
Confidence 56678999998752 223332221 36899999999999976533 379999996
No 269
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=98.18 E-value=3.4e-06 Score=48.60 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=30.8
Q ss_pred ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 19 SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 19 ~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
+|.|...+.. .+.+|+.++|.|.+.+ |++.+.|||+|..+
T Consensus 5 ~P~i~~~p~~---~v~~G~~v~L~C~~~~--~~~~~~w~k~g~~~ 44 (196)
T 3p2t_A 5 KPTLWAEPGS---VISWGNSVTIWCQGTL--EAREYRLDKEESPA 44 (196)
T ss_dssp CCEEEEESCS---EEETTCCEEEEEECCT--TCCEEEEEETTSCS
T ss_pred CCEEEccCCC---cCCCCCcEEEEeeCCC--CCCEEEEEECCCCC
Confidence 4456544432 6889999999999865 77899999998764
No 270
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.17 E-value=3.7e-06 Score=49.36 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=26.8
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
..+.+|+.+.|.|.+.++.|+|.|+|||++
T Consensus 128 ~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~ 157 (226)
T 4f80_A 128 VKGYKDGGIHLECRSTGWYPQPQIQWSNNK 157 (226)
T ss_dssp EEEEETTEEEEEEEEEEEBSCCEEEEECTT
T ss_pred eeeccCCceeeEEEeccCCCCCEEEEEECC
Confidence 367889999999999888899999999965
No 271
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=98.17 E-value=3.9e-06 Score=54.32 Aligned_cols=54 Identities=17% Similarity=0.379 Sum_probs=39.7
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-c-eEEEEECCE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-A-KIVWYRGNT 61 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~-~i~W~~~~~ 61 (65)
++..++|+|.. ++..|.+...... ...+|+.++|.|.+.+..|. + .|+|++++.
T Consensus 112 ~~~~~~l~V~~~~~~~P~i~~~~~~---~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~ 168 (475)
T 1iga_A 112 WGQGTLVTVSSASPTSPKVFPLSLC---STQPDGNVVIACLVQGFFPQEPLSVTWSESGQ 168 (475)
T ss_pred ecCceEEEeccCCCcCCeEEecCcc---ccCCCCeEEEEEEEeeecCCCceEEEEcCCCc
Confidence 56678999984 4555666543321 23789999999999887676 4 999999985
No 272
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.17 E-value=2.1e-06 Score=58.45 Aligned_cols=52 Identities=17% Similarity=0.213 Sum_probs=38.6
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.|.|.++|....... ....+.+|+.++|.|.+.++.|++.|+||+||+.+
T Consensus 610 ~~~v~v~~~p~~~~~~~----~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l 661 (816)
T 3dmk_A 610 SLEVQVMVLPRIIPFAF----EEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAI 661 (816)
T ss_dssp EEEEEEECCCCCBCCCC----CSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCC
T ss_pred eEEEEEecCCccccccc----cccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEc
Confidence 46777788876432211 12357899999999999877777799999999876
No 273
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.17 E-value=6.9e-06 Score=49.16 Aligned_cols=53 Identities=11% Similarity=0.303 Sum_probs=36.7
Q ss_pred ccCCCEEEEEEcCCC-------------ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 4 RYGPRTRLYQFAPPS-------------SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~-------------~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.++..+.|+|...+. .+.+... +..+.+.+|+.++|.|.+.+ .|.+.|.|||+
T Consensus 110 ~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~v~~G~~v~L~C~~~~-~~~~~v~W~k~ 175 (256)
T 3umt_A 110 YWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQS--PSSLSASLGERVSITCRASQ-DIGSNLNWLQQ 175 (256)
T ss_dssp EECCCEEEEECC---------------CCCCEEEE--CSEEEECTTCCEEEEEEESS-CCTTCEEEEEE
T ss_pred EECCCEEEEEcCCCccccCcccCCCCccccEEEcC--CCeEEEECCCCEEEEEEEec-CCCcEEEEEEE
Confidence 356778999985311 2233322 23467899999999999966 57779999994
No 274
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.17 E-value=4e-06 Score=50.02 Aligned_cols=29 Identities=31% Similarity=0.694 Sum_probs=24.6
Q ss_pred CCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 36 NQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 36 G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
|..++|.|.+.+..|+ +.|+|||||+++.
T Consensus 133 ~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 162 (231)
T 2w59_A 133 LSRVTLSCLVRGFRPRDIEIRWLRDHRAVP 162 (231)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred cCceEEEEEEEeccCCCcEEEEEECCEECC
Confidence 5579999999887774 8999999999874
No 275
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=98.17 E-value=1.8e-06 Score=56.14 Aligned_cols=32 Identities=16% Similarity=0.446 Sum_probs=26.9
Q ss_pred eecCCcEEEEEEecCCCCC---ceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPA---AKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~---~~i~W~~~~~~l~ 64 (65)
+.+|+.++|.|.+.+..|+ +.|+|||||+++.
T Consensus 331 v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~ 365 (523)
T 2rcj_C 331 LMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVH 365 (523)
T ss_pred cccCCceEEEEEEecccCCCCceEEEEEECCeEcc
Confidence 6889999999999875444 6999999998863
No 276
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.17 E-value=4.1e-06 Score=50.19 Aligned_cols=48 Identities=19% Similarity=0.361 Sum_probs=36.9
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
...+.|+|+..|. +.+..... .+.+|+.++|.|.+. |.+.|+| ||+.+
T Consensus 88 ~~~~~l~V~~~p~-p~~~~~~~----~v~~G~~v~l~C~~~---p~~~i~W--~g~~~ 135 (265)
T 2oz4_A 88 ETLQTVTIYSFPA-PNVILTKP----EVSEGTEVTVKCEAH---PRAKVTL--NGVPA 135 (265)
T ss_dssp EEEEEEEEECCCC-CEEEESCS----EEETTCEEEEEEECC---TTSEEEE--SSCSS
T ss_pred EEEEEEEEeCCCC-ceeecCCc----eecCCCcEEEEEEcc---CCCEEEE--CCEEc
Confidence 3468899988665 56654333 688899999999985 8999999 77654
No 277
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.16 E-value=9.7e-06 Score=48.50 Aligned_cols=52 Identities=13% Similarity=0.378 Sum_probs=36.6
Q ss_pred cCCCEEEEEEcCCCc------------cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEE
Q psy7728 5 YGPRTRLYQFAPPSS------------IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR 58 (65)
Q Consensus 5 ~~~~~~L~V~~pP~~------------~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~ 58 (65)
++..+.|.|..++.. +.+... +..+.+.+|+.++|.|.+.+..+.+.|.|||
T Consensus 123 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k 186 (256)
T 3juy_B 123 WGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQA--PGTLSLSPGERATFSCRSSHSIRSRRVAWYQ 186 (256)
T ss_dssp ECCCEEEEECSCC----------CCCCCCEEEE--CSEEEECTTSCEEEEEEESSCCTTCCEEEEE
T ss_pred ECCceEEeecCCcccccccccCCCcceeEEEec--CCeEEEeCCCCEEEEEEECCCcCCeeEEEEE
Confidence 567789999886541 222222 2356889999999999997643348999999
No 278
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.16 E-value=7.2e-06 Score=48.89 Aligned_cols=53 Identities=15% Similarity=0.307 Sum_probs=35.1
Q ss_pred ccCCCEEEEEEcCCC------------------ccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEEC
Q psy7728 4 RYGPRTRLYQFAPPS------------------SIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRG 59 (65)
Q Consensus 4 ~~~~~~~L~V~~pP~------------------~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~ 59 (65)
.++..+.|+|..+|. .+.+...+. ..+.+|+.++|.|.+.+..+ .+.+.|||+
T Consensus 102 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 173 (256)
T 3ux9_B 102 VFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGG---GLVQPGGSLRLSCAASGFTFSSYAMSWVRQ 173 (256)
T ss_dssp EECCCEEEEEC----------------------CCEEEEECC---EEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred EECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCC---eEEcCCCeEEEEEEEeCCcccccEEEEEEE
Confidence 456778999988763 223332222 35899999999999976432 789999996
No 279
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=98.16 E-value=1.6e-06 Score=51.09 Aligned_cols=32 Identities=31% Similarity=0.673 Sum_probs=27.4
Q ss_pred eecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
+.+|+.++|.|.+.+.+|+ +.|+|+|||+.+.
T Consensus 119 ~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 151 (214)
T 1ow0_A 119 LALNELVTLTCLARGFSPKDVLVRWLQGSQELP 151 (214)
T ss_dssp TTSSSEEEEEEEEEEESSSCCEEEEEETTEECC
T ss_pred hccCCceEEEEEEeeeECCCcEEEEEECCEECC
Confidence 5679999999999887775 5999999998863
No 280
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=98.16 E-value=1.4e-06 Score=52.84 Aligned_cols=57 Identities=19% Similarity=0.316 Sum_probs=38.5
Q ss_pred ccCCCEEEEEE-cCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEECCEE
Q psy7728 4 RYGPRTRLYQF-APPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRGNTE 62 (65)
Q Consensus 4 ~~~~~~~L~V~-~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~~~~ 62 (65)
.++..+.|+|. .++..|.+...... ..+..|+.++|.|.+.+..| +..++|+++|+.
T Consensus 125 ~~~~~t~l~V~~~~~~~P~v~~~~~~--~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~g~~ 183 (248)
T 3u2s_H 125 VWGKGTTVTVSSASTKGPSVFPLAPS--SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 183 (248)
T ss_dssp EECCCEEEEECSCCCBCCEEEEECCC--------CEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred eeCCCEEEEEcccCCCCCEEEEeCCC--ccccCCCcEEEEEEEeeEECCCeEEEEeECCcc
Confidence 36678899998 56666776533221 13567999999999988777 578999999863
No 281
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=98.16 E-value=2.8e-06 Score=49.84 Aligned_cols=35 Identities=14% Similarity=0.535 Sum_probs=30.2
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+.+|+.++|.|.+.+ .|.+.|+|||+|+.+.
T Consensus 23 ~~~~v~~G~~v~L~C~~~~-~p~~~v~W~~~~~~~~ 57 (241)
T 3grw_A 23 KLLAVPAANTVRFRCPAAG-NPTPSISWLKNGREFR 57 (241)
T ss_dssp CEEEEETTSEEEEECCEEC-SSCCEEEEEETTEECC
T ss_pred cceEEcCCCeEEEEEEecC-CCCceeEEEECCcccC
Confidence 3468899999999999965 6899999999998863
No 282
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.15 E-value=4.4e-06 Score=44.84 Aligned_cols=40 Identities=23% Similarity=0.279 Sum_probs=29.7
Q ss_pred ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 19 SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 19 ~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
+|.|...+.. .+.+|++++|+|.+.+ ++..+.|||+|+.+
T Consensus 5 kP~i~~~p~~---~v~~G~~VtL~C~~~~--~~~~~~w~k~g~~~ 44 (105)
T 2vsd_A 5 QPSLSLHPSQ---GVSLGDTVTLRCHLPR--MAAWVQLWLNGTLR 44 (105)
T ss_dssp CCEEEEESCS---SCCTTCEEEEEEECCS--SCEEEEEEETTEEE
T ss_pred CCEEEeCCCC---CcCcCCCEEEEEEcCC--CCcEEEEEECCccc
Confidence 3566554432 5889999999999864 35789999999754
No 283
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=98.15 E-value=6.8e-06 Score=49.56 Aligned_cols=54 Identities=11% Similarity=0.172 Sum_probs=38.9
Q ss_pred CCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCce-EEEEECCEE
Q psy7728 6 GPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAK-IVWYRGNTE 62 (65)
Q Consensus 6 ~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~-i~W~~~~~~ 62 (65)
+..+.|+|.. +...|.+...+. ...+.+|+.++|.|.+. +.|.+. |+|||+|..
T Consensus 174 s~~~~l~V~~~~~~~P~i~~~~~--~~~v~~G~~v~l~C~~~-g~p~p~~i~W~~~~~~ 229 (290)
T 2o26_X 174 SDKFTLKVREAIKAIPVVSVPET--SHLLKKGDTFTVVCTIK-DVSTSVNSMWLKMNPQ 229 (290)
T ss_dssp CCCEEEEEECCCCSCCEEECSCS--BCCCCTTCCEEEEEEEE-ESSTTCEEEEEEESSS
T ss_pred eEEEEEEEEeCCCCCCccccCCC--cceEecCCcEEEEEEEe-cCCcceeEEEecCCCC
Confidence 4568899984 223445544332 23789999999999997 568875 999999865
No 284
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.15 E-value=3.9e-07 Score=57.04 Aligned_cols=49 Identities=16% Similarity=0.200 Sum_probs=35.7
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.|+|..+|. +.. . ...+|+.++|.|.+.+ .|.|.|+|||+|+.+.
T Consensus 240 ~~~~~l~V~~~P~---i~~-~-----~~~~g~~v~l~C~~~g-~P~p~i~W~~~g~~l~ 288 (347)
T 2ifg_A 240 EVSVQVNVSFPAS---VQL-H-----TAVEMHHWCIPFSVDG-QPAPSLRWLFNGSVLN 288 (347)
T ss_dssp CEEECCCCBEEEE---EEE-C-----CCEESSSEEEEEEEEE-ESCCEEEEEETTEECC
T ss_pred EEEEEEEEcCCCe---eee-c-----cCccCceEEEEEEeee-cCCCcEEEEeCCEECC
Confidence 3345666766664 211 1 3467999999999965 6999999999998874
No 285
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.14 E-value=1.1e-06 Score=56.15 Aligned_cols=56 Identities=21% Similarity=0.381 Sum_probs=39.0
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~ 62 (65)
++..+.|+|.. ++..|.+...... ..+.+|+.++|.|.+.+..|.+ .|+|+|++..
T Consensus 104 ~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~ 161 (434)
T 1igy_B 104 WGQGTTVTVSSAKTTPPSVYPLAPG--SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 161 (434)
T ss_dssp CCCCEECEECCSCCBCCCEEEECCC--CCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBC
T ss_pred cCCceEEEEccCCCCCCeEEEcCCc--cccCCCCcEEEEEEEeeecCCCeEEEEeeCCcC
Confidence 45678999984 3333444322211 1357899999999998776876 9999999864
No 286
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.14 E-value=1.4e-06 Score=48.73 Aligned_cols=31 Identities=13% Similarity=0.469 Sum_probs=26.5
Q ss_pred eEEeecCCcEEEEEEecCC--CCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNA--KPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~--~P~~~i~W~~~~ 60 (65)
.+.+.+|+.++|.|.+.+. .|.|.|+||||.
T Consensus 21 ~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk 53 (118)
T 2edn_A 21 SVSVETGKDAVVVAKVNGKELPDKPTIKWFKGK 53 (118)
T ss_dssp CCEEETTSCEECCEEEETTTSSSCCCCEEEETT
T ss_pred CeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCC
Confidence 4578999999999999754 489999999984
No 287
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=98.14 E-value=1.9e-06 Score=49.52 Aligned_cols=34 Identities=24% Similarity=0.711 Sum_probs=29.4
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.+.+|+.++|.|.+. ++|.+.++|||+|+.+.
T Consensus 18 ~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~~ 51 (212)
T 2v9r_A 18 DLIVSKGEPATLNCKAE-GRPTPTIEWYKGGERVE 51 (212)
T ss_dssp CEEECTTCCEEECCEEE-EESCCEEEEEETTEECC
T ss_pred ceEEeCCCcEEEEEEcC-CCCCCEEEEEECCEEee
Confidence 46789999999999985 47899999999998763
No 288
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.14 E-value=4.7e-06 Score=49.69 Aligned_cols=52 Identities=17% Similarity=0.241 Sum_probs=33.3
Q ss_pred cCCCEEEEEEcCCC-----------ccEEEeCCCCCeEEeecCCcEEEEEEecCCC-CCceEEEEEC
Q psy7728 5 YGPRTRLYQFAPPS-----------SIEIVGHPSNSKIEIRENQEITLECLVKNAK-PAAKIVWYRG 59 (65)
Q Consensus 5 ~~~~~~L~V~~pP~-----------~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~ 59 (65)
++..+.|+|..+|. .+.+...+. ..+.+|+.++|.|.+.+.. |.+.|.|||+
T Consensus 98 ~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 98 FGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGP---SLVKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp ECCCEEEEEC---------------CCEEEEECC---SEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ECCCEEEEEcCCCCCCcccccccccceeeecCCc---ceecCCCeEEEEEEEEccccCCcceeeEee
Confidence 45678999988764 122322111 2589999999999997643 3578999995
No 289
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=98.14 E-value=4.7e-06 Score=44.99 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=26.9
Q ss_pred ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-----eEEEEECCEEc
Q psy7728 19 SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-----KIVWYRGNTEL 63 (65)
Q Consensus 19 ~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-----~i~W~~~~~~l 63 (65)
+|.|...+.. .+.+|+.++|+|.+.. .|.. .+.|||||+.+
T Consensus 8 kP~l~~~p~~---~v~~G~~VtL~C~~~~-~~~~~~~~~~~~w~k~g~~l 53 (108)
T 4hwn_A 8 APILRAVPSA---EPQAGSPMTLSCQTKL-PLQRSAARLLFSFYKDGRIV 53 (108)
T ss_dssp CCEEEEESCS---SCBTTCCEEEEEEC----------CCEEEEEETTEEE
T ss_pred CCEEEecCCC---cCCCCCcEEEEEcccC-CCCCcCcceEEEEEECCcCc
Confidence 4566554431 4789999999999853 3443 49999999875
No 290
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=98.14 E-value=8.7e-06 Score=50.73 Aligned_cols=32 Identities=28% Similarity=0.530 Sum_probs=27.8
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEEC--CEEc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRG--NTEL 63 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~--~~~l 63 (65)
..+.+|+.++|.|.+. ++|.+.|+|||+ |..+
T Consensus 10 ~~~~~G~~v~l~C~~~-g~p~p~v~W~~~~~g~~~ 43 (389)
T 2jll_A 10 ETTYENGQVTLVCDAE-GEPIPEITWKRAVDGFTF 43 (389)
T ss_dssp EEEETTSEEEEEEEEE-CSSCCEEEEEETTTTEEE
T ss_pred eEEeCCCeEEEEEEee-cccCCeEEEEeCCCCcee
Confidence 4678899999999996 589999999999 8765
No 291
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.13 E-value=9.3e-06 Score=48.52 Aligned_cols=52 Identities=19% Similarity=0.393 Sum_probs=35.8
Q ss_pred cCCCEEEEEEcCC-----------CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEEC
Q psy7728 5 YGPRTRLYQFAPP-----------SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRG 59 (65)
Q Consensus 5 ~~~~~~L~V~~pP-----------~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~ 59 (65)
++..+.|+|..++ ..+.+.. .+..+.+.+|+.++|.|.+.+ .|.+ .+.|||+
T Consensus 116 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~--~p~~~~v~~G~~v~L~C~~~~-~~~~~~v~W~k~ 179 (257)
T 3gkz_A 116 WGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQ--SPAIMSASPGEKVTLTCSASS-SVSSSHLYWYQQ 179 (257)
T ss_dssp ECCCEEEEEC---------CTTCCCCCCEEC--SCSEEEECTTCCEEEEEEESS-CCCGGGEEEEEE
T ss_pred EcCCEEEeecCchhhcccccCCCccceEEEc--CCceEEEeCCCcEEEEEEEcc-CccceEEEEEEE
Confidence 5677889998762 1233432 233568899999999999976 4665 9999993
No 292
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.12 E-value=2e-06 Score=55.00 Aligned_cols=56 Identities=20% Similarity=0.340 Sum_probs=39.5
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~ 62 (65)
++..++|+|.. .+..|.+....... .+.+|+.++|.|.+.+..|.+ .|+|+|++..
T Consensus 108 ~~~~~~l~V~~~~~~~P~i~~~~~~~--~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 165 (444)
T 1igt_B 108 WGQGTTVTVSSAKTTAPSVYPLAPVC--GDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 165 (444)
T ss_dssp EBCCEEEEECSCCCBCCEEEEECCCS--SCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred ccCcEEEEecCCCCCCCceeEecccc--cCCCCCcEEEEEEEcceeCCCcEEEEecCCCC
Confidence 55678899985 33344554322111 247899999999998877876 9999999865
No 293
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=98.12 E-value=2.2e-06 Score=49.67 Aligned_cols=34 Identities=15% Similarity=0.468 Sum_probs=29.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.+|+.++|.|.+.+ .|.+.|+|||+|+.+.
T Consensus 28 ~~~v~~G~~v~L~C~~~~-~p~~~v~W~~~~~~~~ 61 (231)
T 3ojm_B 28 LHAVPAANTVKFRCPAGG-NPMPTMRWLKNGKEFK 61 (231)
T ss_dssp CEEEETTSCEEEECCEEE-ESCCEEEEEETTEECC
T ss_pred eEEEccCCCEEEEEeccc-CCCCeEEEEECCcccc
Confidence 457899999999999865 6899999999998863
No 294
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.11 E-value=1.6e-05 Score=46.81 Aligned_cols=52 Identities=13% Similarity=0.261 Sum_probs=36.6
Q ss_pred cCCCEEEEEEcCCC----ccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEEC
Q psy7728 5 YGPRTRLYQFAPPS----SIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRG 59 (65)
Q Consensus 5 ~~~~~~L~V~~pP~----~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~ 59 (65)
++..+.|+|..++. ...+... ....+.+|+.++|.|.+.+..+ .+.|.|||+
T Consensus 102 ~~~~~~l~V~~~~~~~~~~~~~~~~---~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 102 FGGGTKLEIKGGGSGGGGEVQLQQS---GAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp BCCCEEEEECCCSCCCCCCCEEEEC---CCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred ecCCEEEEEecCCCCCCceEEEeCC---CceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 56678999988653 2223221 2357899999999999976532 479999995
No 295
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=98.11 E-value=1.7e-06 Score=51.84 Aligned_cols=56 Identities=20% Similarity=0.319 Sum_probs=38.9
Q ss_pred cCCCEEEEEE-cCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEE
Q psy7728 5 YGPRTRLYQF-APPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~-~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~ 62 (65)
++..+.|+|. .++..|.+...... ..+.+|+.++|.|.+.+..|.+ .++|+++|+.
T Consensus 125 ~~~~t~l~V~~~~~~~P~v~~~~~~--~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~ 182 (239)
T 3tv3_H 125 WGRGTLVTVSSASTKGPSVFPLAPS--SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 182 (239)
T ss_dssp ECCCEEEEECCCCCBCCEEEEECCC--CCC--TTEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred eCCCcEEeeccCCCcCCEEEEECCC--hhhccCCcEEEEEEEeeEeCCCeEEEEEECCcc
Confidence 5677899997 45666776532211 1356799999999998877755 5899999864
No 296
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=98.10 E-value=5.1e-06 Score=49.85 Aligned_cols=51 Identities=22% Similarity=0.359 Sum_probs=34.8
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+.|+|..+|.... ......+.+|+.++|.|.+. ++|.+.++||+++..+
T Consensus 89 ~~~~l~v~~~~~~~~-----~~~~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~~~~~ 139 (291)
T 2wim_A 89 ATVVLEIYQKLTFRE-----VVSPQEFKQGEDAEVVCRVS-SSPAPAVSWLYHNEEV 139 (291)
T ss_dssp EEEEEEEECCCBCCS-----CCCSEEEETTSCEEECCCCB-CSSCCEEEEECC----
T ss_pred EEEEEEecCCcceEe-----CCCChhhcCCCCEEEEEEEc-cCCCCEEEEEECCccc
Confidence 346777777764321 12235789999999999985 5799999999998765
No 297
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.09 E-value=7.7e-06 Score=48.08 Aligned_cols=28 Identities=18% Similarity=0.548 Sum_probs=24.5
Q ss_pred ecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+|+.++|.|. +.|.+.|+|+|||+.+.
T Consensus 126 ~~G~~v~L~C~---g~p~p~i~W~k~~~~l~ 153 (204)
T 1sy6_A 126 ISGTTVILTCP---QYPGSEILWQHNDKNIG 153 (204)
T ss_dssp EETTEEEEECS---CCCSSCEEEEETTEEES
T ss_pred ecCCcEEEEcC---CCCCCceEEEECCEECC
Confidence 38999999997 57999999999998763
No 298
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=98.09 E-value=2.3e-06 Score=51.31 Aligned_cols=54 Identities=22% Similarity=0.432 Sum_probs=38.0
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEE-CCEEc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR-GNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~-~~~~l 63 (65)
...+.|.|..+|..... .+ ....+.+|+.++|.|.+.+..++..++||+ +++.+
T Consensus 78 ~~~~~l~V~~~~~~~~~--~~--~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~ 132 (289)
T 3ejj_X 78 STTIHLYVKDPAHSWNL--LA--QEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQV 132 (289)
T ss_dssp CEEEEEEECCSSCSEEE--SC--SEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEEC
T ss_pred eeEEEEEEeCCCcceec--cc--ceEEEecCCceEeEEEccCCCcceEEEEEecCCeec
Confidence 45578888887765222 12 356889999999999997644444599987 56654
No 299
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=98.09 E-value=2.1e-06 Score=52.81 Aligned_cols=32 Identities=16% Similarity=0.568 Sum_probs=27.4
Q ss_pred eecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
+.+|+.++|.|.+.+.+|++ .|+|||||+++.
T Consensus 232 ~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 264 (327)
T 2wng_A 232 VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSR 264 (327)
T ss_dssp CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEE
T ss_pred cCCCCcEEEEEEEccccCCCcEEEEEECCeEcc
Confidence 67999999999998766665 899999999763
No 300
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.08 E-value=5.4e-06 Score=46.98 Aligned_cols=33 Identities=21% Similarity=0.407 Sum_probs=26.8
Q ss_pred EeecCCcEEEEEEecCC-CCCceEEEEECCEEcc
Q psy7728 32 EIRENQEITLECLVKNA-KPAAKIVWYRGNTELK 64 (65)
Q Consensus 32 ~~~~G~~~~L~C~~~~~-~P~~~i~W~~~~~~l~ 64 (65)
.+.+|+.++|.|.+.+. .|...++|||+|+.+.
T Consensus 9 ~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~ 42 (184)
T 3b5h_A 9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLK 42 (184)
T ss_dssp EEEETTEEEEEEEEESCSSCCCEEEEESSSEEEE
T ss_pred EEecCCCEEEEEECCCCCCCceEEEEEeCCEEee
Confidence 67899999999998664 2333999999998864
No 301
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.08 E-value=1.1e-05 Score=46.26 Aligned_cols=37 Identities=14% Similarity=0.091 Sum_probs=28.8
Q ss_pred cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCE
Q psy7728 20 IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNT 61 (65)
Q Consensus 20 ~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~ 61 (65)
|.|...+. ..+.+|+.++|.|.+.+ |.+.+.|||+|.
T Consensus 9 P~i~~~p~---~~v~~G~~v~L~C~~~~--~~~~~~W~k~g~ 45 (184)
T 2gi7_A 9 PSLQALPS---SLVPLEKPVTLRCQGPP--GVDLYRLEKLSS 45 (184)
T ss_dssp CEEEEESC---SEEETTCCEEEEEECST--TCSEEEEEETTT
T ss_pred CeEEeCCC---ccccCCCcEEEEEeCCC--CCCEEEEEECCc
Confidence 45554443 16899999999999854 788999999985
No 302
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=98.08 E-value=7.5e-06 Score=47.24 Aligned_cols=39 Identities=10% Similarity=0.181 Sum_probs=29.3
Q ss_pred cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 20 IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 20 ~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
|.+...+. ..+.+|+.++|.|.+.+ .|. .+.|||+|..+
T Consensus 6 P~i~~~p~---~~v~~G~~v~L~C~~~~-~~~-~~~W~k~g~~~ 44 (196)
T 2d3v_A 6 ATLWAEPG---SVISRGNSVTIRCQGTL-EAQ-EYRLVKEGSPE 44 (196)
T ss_dssp CEEEEESC---SEEETTCCEEEEEECCT-TCC-EEEEEETTCSS
T ss_pred CEEEeCCC---CcccCCCeEEEEEeCCC-CCc-EEEEEECCCCC
Confidence 45554443 26889999999999864 454 99999998754
No 303
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.07 E-value=1.4e-06 Score=53.38 Aligned_cols=33 Identities=15% Similarity=0.588 Sum_probs=28.5
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+|+.++|.|.+. ++|.+.|+|||+|+.+.
T Consensus 133 ~~v~~g~~v~l~C~~~-g~p~~~v~W~~~~~~~~ 165 (334)
T 1ry7_B 133 LAVPAANTVRFRCPAA-GNPTPSISWLKNGREFR 165 (334)
T ss_dssp EEEETTCCEEEECCCC-CSSCCEEECCBTTBCCC
T ss_pred EEecCCCcEEEEEEcc-CCCCCeEEEEECCEECc
Confidence 5788999999999985 57999999999998653
No 304
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=98.07 E-value=3.7e-06 Score=50.94 Aligned_cols=35 Identities=23% Similarity=0.599 Sum_probs=30.1
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+.+|+.++|.|.+. ++|.+.|+|||+|+.+.
T Consensus 230 ~~~~v~~g~~~~l~C~~~-g~p~p~i~W~~~g~~~~ 264 (317)
T 2y25_A 230 DVVTIQEGKALNLTCNVW-GDPPPEVSWLKNEKALA 264 (317)
T ss_dssp SEEEEETTSBBCEEEEEE-CSSCCEEEEEESSSEEC
T ss_pred ccEEEEcCCEEEEEEEEe-cCCCCEEEEEECCEeCC
Confidence 346789999999999996 57999999999998763
No 305
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=98.06 E-value=6.1e-06 Score=46.84 Aligned_cols=41 Identities=20% Similarity=0.387 Sum_probs=30.9
Q ss_pred EEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEE-CCEEc
Q psy7728 10 RLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYR-GNTEL 63 (65)
Q Consensus 10 ~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~-~~~~l 63 (65)
.|.|..+|++ +.+.+|+.++|.|.+.+ .|. .++||| +++.+
T Consensus 2 ~l~~~~~~~~-----------~~v~~G~~v~L~C~~~~-~p~-~v~W~~~~~~~~ 43 (189)
T 2v44_A 2 LLQVTISLSK-----------VELSVGESKFFTCTAIG-EPE-SIDWYNPQGEKI 43 (189)
T ss_dssp EEEEEESCSE-----------EEEETTCCEEEEEEEEE-CCS-EEEEECTTSCBC
T ss_pred ceEEEecCCc-----------eEEecCCcEEEEEEeec-CCe-eEEEEeCCCCcc
Confidence 4666666543 36789999999999965 566 999999 66654
No 306
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.05 E-value=5.4e-06 Score=50.95 Aligned_cols=52 Identities=15% Similarity=0.380 Sum_probs=35.0
Q ss_pred cCCCEEEEEEcC-----------CC--ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc------eEEEEEC
Q psy7728 5 YGPRTRLYQFAP-----------PS--SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA------KIVWYRG 59 (65)
Q Consensus 5 ~~~~~~L~V~~p-----------P~--~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~------~i~W~~~ 59 (65)
++..++|+|..+ |. .+.+. ..+..+.+.+|+.++|.|.+.+. |.+ .|.|||+
T Consensus 132 ~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~--~~p~~~~v~~G~~v~L~C~~~~~-~~~~~~~~~~v~W~k~ 202 (291)
T 2gki_A 132 WGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMS--QSPSSLAVSAGEKVTMSCKSSQS-LFNSRTRKNYLAWYQQ 202 (291)
T ss_dssp ECCCEEEEECC----------------CCCEE--CSCSEEEEETTSCEEEEEEESSC-CEETTTTEECEEEEEE
T ss_pred eCCCcEEEEecCCccccccccCCCCCccceEE--cCCCEEEEcCCCcEEEEEEcCCc-cccccccceeEEEEEE
Confidence 456678888872 11 22232 22345678999999999999664 544 8999996
No 307
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.05 E-value=7.1e-06 Score=47.15 Aligned_cols=31 Identities=16% Similarity=0.310 Sum_probs=26.7
Q ss_pred ecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
-+++.+.|.|.+.+.+|.+.|+|||+|+++.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~ 45 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIR 45 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECC
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEcc
Confidence 3678889999998878899999999998864
No 308
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.05 E-value=6.1e-06 Score=49.53 Aligned_cols=56 Identities=13% Similarity=0.112 Sum_probs=40.0
Q ss_pred CCCEEEEEEcCC-CccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 6 GPRTRLYQFAPP-SSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP-~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
+..+.|.|...+ ..|.+...+. ...+.+|+.++|+|.+.+..|+..+.|++++..+
T Consensus 172 s~~~~l~V~~~~~~~p~i~~~~~--~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~ 228 (292)
T 4dkd_C 172 SISIRLKVQKVIPGPPALTLVPA--ELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKL 228 (292)
T ss_dssp CCCEEEEEECCCCSSCEEEEESS--CBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCC
T ss_pred EEEEEEEEeCCCCCCCeEEccCC--ceeEecCCCEEEEEEecCCCCceEEEEeCCCccc
Confidence 457899998622 2445554333 2345799999999999876666889999998754
No 309
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.05 E-value=2.4e-06 Score=49.42 Aligned_cols=28 Identities=18% Similarity=0.465 Sum_probs=24.8
Q ss_pred eecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+.+|+.++|.|.+ |.+.|+|||||+++.
T Consensus 119 ~~~G~~v~l~C~~----p~p~i~W~k~g~~i~ 146 (186)
T 1jbj_A 119 SRGDGSVLLTCGL----TDKTIKWLKDGSIIS 146 (186)
T ss_dssp CSSSCEEEEECSS----SCSCEEEEETTEECC
T ss_pred cCCCCeEEEEeeC----CCCeEEEEECCEECc
Confidence 4499999999987 889999999999874
No 310
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=98.05 E-value=1.5e-06 Score=51.70 Aligned_cols=39 Identities=13% Similarity=0.012 Sum_probs=29.9
Q ss_pred ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 19 SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 19 ~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
.|.|...+. ..+.+|+.++|.|.+.+ |++.+.|||||+.
T Consensus 9 ~P~i~~~p~---~~v~~G~~vtL~C~~~~--~~~~~~W~k~g~~ 47 (218)
T 1uct_A 9 MPFISAKSS---PVIPLDGSVKIQCQAIR--EAYLTQLMIIKNS 47 (218)
T ss_dssp CCCEEESSC---SEEETTCCEEEEECCCT--TCSEEEEEEEETT
T ss_pred CCEEEecCC---CccCCCCCEEEEEEcCC--CCCEEEEEECCCc
Confidence 445655543 26899999999999854 6889999999754
No 311
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.05 E-value=1.2e-05 Score=47.06 Aligned_cols=29 Identities=17% Similarity=0.343 Sum_probs=22.5
Q ss_pred EEeecCCcEEEEEEecCCCCCc---eEEEEECC
Q psy7728 31 IEIRENQEITLECLVKNAKPAA---KIVWYRGN 60 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~---~i~W~~~~ 60 (65)
+.+.+|++++|.|.+.+. |.+ .|+|||++
T Consensus 14 V~v~~G~~v~L~C~v~~~-~~~~~~~V~W~k~~ 45 (226)
T 4f80_A 14 ILAMVGEDADLPCHLFPT-MSAETMELKWVSSS 45 (226)
T ss_dssp EEEETTSCEEEEEEEESC-CCCTTSEEEEEETT
T ss_pred EEEEcCCcEEEEEEEECC-CCCCceEEEEEECC
Confidence 357889999999998643 333 69999976
No 312
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.04 E-value=1.8e-05 Score=45.48 Aligned_cols=39 Identities=13% Similarity=0.097 Sum_probs=29.7
Q ss_pred cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 20 IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 20 ~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
|.|...+.. .+.+|+.++|.|.+.+ ++..+.|||+|+.+
T Consensus 5 P~i~~~p~~---~v~~G~~v~L~C~~~~--~~~~~~w~k~g~~~ 43 (188)
T 1oll_A 5 PFIWAEPHF---MVPKEKQVTICCQGNY--GAVEYQLHFEGSLF 43 (188)
T ss_dssp CEEEEESCS---EEETTCCEEEEEECCT--TCCEEEEEETTEEE
T ss_pred CEEEeecCC---cCCCCCCEEEEEecCC--CCCEEEEEECCCcc
Confidence 455554432 6889999999999853 46789999999865
No 313
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=98.03 E-value=6.1e-06 Score=51.40 Aligned_cols=33 Identities=24% Similarity=0.668 Sum_probs=28.2
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEE-CCEEc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYR-GNTEL 63 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~-~~~~l 63 (65)
.+.+.+|+.++|.|.+. |+|.+.|+||| ||+.+
T Consensus 13 ~~~~~~G~~v~l~C~~~-g~p~p~v~W~k~~g~~~ 46 (388)
T 2v5m_A 13 RIDFSNSTGAEIECKAS-GNPMPEIIWIRSDGTAV 46 (388)
T ss_dssp EEEEETTTCEEEECEEE-EESCCEEEEEETTSCBC
T ss_pred eEEEEcCccEEEEEECC-CCCCCEEEEEcCCCCcc
Confidence 45688999999999995 57999999999 77765
No 314
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=98.03 E-value=2.3e-06 Score=53.38 Aligned_cols=53 Identities=13% Similarity=0.118 Sum_probs=39.7
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
+..+.|.|.++|.... .......+.+|+.++|.|.+..+.|.+.|+|||++.+
T Consensus 90 s~~~~l~v~~~~~~~~----~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~ 142 (382)
T 1cs6_A 90 SREASLRFGFLQEFSA----EERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFP 142 (382)
T ss_dssp CCCEEEEEEEECCCCS----SCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTT
T ss_pred ecceEEEeeccccccc----cCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCc
Confidence 4468888887664321 1123457899999999999777789999999999864
No 315
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.03 E-value=4e-06 Score=49.32 Aligned_cols=28 Identities=21% Similarity=0.569 Sum_probs=24.6
Q ss_pred eecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
+.+|+.++|.|.+ |.+.|+|||||+.+.
T Consensus 15 ~~~G~~v~L~C~~----p~~~i~W~k~g~~l~ 42 (204)
T 1sy6_A 15 YQEDGSVLLTCDA----EAKNITWFKDGKMIG 42 (204)
T ss_dssp CCSSSEEEEEECS----CSSEEEEEETTEEEE
T ss_pred ecCCCeEEEEEcC----CCCEEEEEECCEECC
Confidence 4689999999987 789999999998863
No 316
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.02 E-value=1.2e-05 Score=52.97 Aligned_cols=32 Identities=16% Similarity=0.326 Sum_probs=27.2
Q ss_pred eecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
+.+|+.++|+|.+.+++|+ ..|+|+|||+.+.
T Consensus 309 ~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~ 341 (512)
T 1zvo_C 309 LWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPT 341 (512)
T ss_pred hccCCceEEEEEEeceECCCeEEEEEECCEecc
Confidence 5679999999999887674 5999999998764
No 317
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=98.02 E-value=1.5e-05 Score=54.38 Aligned_cols=54 Identities=13% Similarity=0.198 Sum_probs=38.5
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
.+.|.|......|.+..... ...+.+|+.++|.|.+.+ +|.+.|+|+++|+.+.
T Consensus 418 ~~~l~v~~~~~~p~i~~~~~--~~~v~~G~~v~L~C~~~g-~p~p~v~W~~~g~~l~ 471 (816)
T 3dmk_A 418 SAELKLGGRFDPPVIRQAFQ--EETMEPGPSVFLKCVAGG-NPTPEISWELDGKKIA 471 (816)
T ss_dssp CCEEECCCSSCCCEEEEECC--CEEECSSSCEEEEEEEEC-SSCCEEEEEETTEECC
T ss_pred EEEEEEccccCCCceEecCc--ceEEcCCCCEEEEEEEec-CCCCEEEEEECCEECC
Confidence 45666654333445543222 247889999999999855 8999999999998763
No 318
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.02 E-value=3.9e-06 Score=49.00 Aligned_cols=31 Identities=19% Similarity=0.451 Sum_probs=25.6
Q ss_pred ecCCcEEEEEEecCCCC---CceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKP---AAKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P---~~~i~W~~~~~~l~ 64 (65)
.+|+.++|.|.+.+..| ...|+|||+++++.
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~ 49 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVH 49 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEEC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCcccc
Confidence 68999999999986543 45999999998753
No 319
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.01 E-value=5.2e-06 Score=48.44 Aligned_cols=30 Identities=23% Similarity=0.534 Sum_probs=24.8
Q ss_pred cCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 35 ENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 35 ~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
+|..++|.|.+.+..|+ +.|+|+|||+++.
T Consensus 123 ~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 153 (207)
T 1l6x_A 123 TKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 153 (207)
T ss_dssp GSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred cCCcEEEEEEEeCeECCCeEEEEEECCeecc
Confidence 45669999999887776 5999999998764
No 320
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.01 E-value=5.9e-07 Score=55.32 Aligned_cols=56 Identities=18% Similarity=0.174 Sum_probs=39.1
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEe----cCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLV----KNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~----~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.|+|..+|....... . ....+.+|+.++|.|.+ ..++|.+.|+|||||+.+.
T Consensus 108 ~~~~~l~V~~~~~~~~~~~-~--~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~ 167 (339)
T 3o4o_C 108 KMSIELRVFENTDAFLPFI-S--YPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLD 167 (339)
T ss_dssp EEEEEEEEECSCGGGHHHH-C--EEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCC
T ss_pred EEEEEEEEEcCCCcccccc-c--cceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCC
Confidence 3457888888765321000 0 11367899999999994 3568999999999998763
No 321
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=98.01 E-value=1.4e-07 Score=57.47 Aligned_cols=50 Identities=18% Similarity=0.206 Sum_probs=33.4
Q ss_pred EEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEc
Q psy7728 9 TRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTEL 63 (65)
Q Consensus 9 ~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l 63 (65)
+.|+|..+|. +..... ....+.+|+.++|.|.+.+ +|++ .++|||++..+
T Consensus 204 ~~l~V~~~P~---~~~~~~-~~~~~~~g~~v~l~C~~~g-~P~p~~v~W~k~~~~~ 254 (308)
T 4fom_A 204 FILDIQYAPE---VSVTGY-DGNWFVGRKGVNLKCNADA-NPPPFKSVWSRLDGQW 254 (308)
T ss_dssp EECCCCEEEE---ECCBCC-CSCEETTCCSCEEECCEEE-ESCEEEEECCBSSSCC
T ss_pred EEEEEecCCe---eEEccc-ceeeeeccccEEEEEEEec-CCCCcEEEEEECCeEC
Confidence 4566666653 221111 1236778999999999965 6766 79999998664
No 322
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.00 E-value=5.4e-06 Score=50.02 Aligned_cols=31 Identities=16% Similarity=0.408 Sum_probs=26.3
Q ss_pred ecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
.+|+.++|.|.+.+..|+ ..|+|+|||+++.
T Consensus 136 ~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 167 (239)
T 1i1c_A 136 MTQSQVSITCMVKGFYPPDIYTEWKMNGQPQE 167 (239)
T ss_dssp GGSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred hcCCcEEEEEEEeeeECCCeEEEEEECCEECC
Confidence 357889999999887776 5899999999874
No 323
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=98.00 E-value=8.4e-06 Score=44.12 Aligned_cols=31 Identities=26% Similarity=0.671 Sum_probs=26.3
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|++++|.|...+..|...|.|||++
T Consensus 16 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~ 46 (120)
T 2yz1_A 16 SVSVAAGDSTVLNCTLTSLLPVGPIKWYRGV 46 (120)
T ss_dssp EEEECTTCCEEECCEESCCCSCCCEEEEESS
T ss_pred eEEEeCCCCEEEEeEECCCCCCcEEEEEcCC
Confidence 3578999999999999765577899999985
No 324
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=97.99 E-value=6.3e-06 Score=45.38 Aligned_cols=31 Identities=26% Similarity=0.725 Sum_probs=26.3
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|++++|.|...+..|.+.|.|||++
T Consensus 12 ~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~ 42 (127)
T 2jju_A 12 SVSVAAGESATLRCAMTSLIPVGPIMWFRGA 42 (127)
T ss_dssp EEEEETTSCEEECCEESCCCSCCCEEEEECS
T ss_pred eEEEeCCCCEEEEEEEeCCCCCCEEEEEecC
Confidence 4578999999999999765577899999975
No 325
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=97.99 E-value=4e-06 Score=49.48 Aligned_cols=31 Identities=19% Similarity=0.488 Sum_probs=26.1
Q ss_pred eecCCcEEEEEEecCCC--CC-ceEEEEECCEEc
Q psy7728 33 IRENQEITLECLVKNAK--PA-AKIVWYRGNTEL 63 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~--P~-~~i~W~~~~~~l 63 (65)
+.+|+.++|.|.+.+.. |+ +.|+|||++..+
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~ 56 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEV 56 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEE
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccc
Confidence 67899999999998653 44 899999999775
No 326
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=97.99 E-value=1.2e-05 Score=46.38 Aligned_cols=39 Identities=18% Similarity=0.298 Sum_probs=29.1
Q ss_pred cEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 20 IEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 20 ~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
|.|...+. ..+.+|+.++|.|.+.+ .|. .++|||+|..+
T Consensus 6 P~i~~~p~---~~v~~G~~v~L~C~~~~-~~~-~~~W~k~g~~~ 44 (198)
T 1ugn_A 6 PTLWAEPG---SVITQGSPVTLRCQGGQ-ETQ-EYRLYREKKTA 44 (198)
T ss_dssp CEEEEESC---SEEETTCCEEEEEECCT-TCC-CEEEEESSSCC
T ss_pred CeEeccCC---CcccCCCcEEEEEEecC-CCc-EEEEEECCccc
Confidence 45554443 26889999999999865 454 79999998765
No 327
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=97.99 E-value=1.3e-05 Score=42.62 Aligned_cols=30 Identities=17% Similarity=0.495 Sum_probs=25.1
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|+.++|.|.+.+ .|.+.|.|||++
T Consensus 10 ~~~~~~G~~v~L~C~~~~-~~~~~v~W~r~~ 39 (108)
T 1jhl_L 10 YLVASPGETITINCRASK-SISKSLAWYQEK 39 (108)
T ss_dssp EEEECTTSCEEEEEEESS-CCTTCEEEEEEC
T ss_pred eeEEcCCCCEEEEeEECC-CCCceEEEEEEC
Confidence 357899999999999965 578899999964
No 328
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=97.98 E-value=1.3e-05 Score=41.94 Aligned_cols=31 Identities=16% Similarity=0.396 Sum_probs=26.7
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCE
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNT 61 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~ 61 (65)
.+.+.+|+.++|.|.+.+ .|.+.|.|||++.
T Consensus 15 ~~~v~~G~~v~L~C~~~~-~~~~~v~W~~~~~ 45 (108)
T 3m45_A 15 NVTVVEGGTAILTCRVDQ-NDNTSLQWSNPAQ 45 (108)
T ss_dssp CEEEETTSCEEEEEEESS-CSSCCEEEECTTC
T ss_pred eeEEEeCCcEEEEeEEcC-CCccEEEEEcCCC
Confidence 368899999999999965 5889999999874
No 329
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.98 E-value=3.2e-05 Score=46.35 Aligned_cols=51 Identities=20% Similarity=0.356 Sum_probs=34.9
Q ss_pred cCCCEEEEEEc-----------------CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 5 YGPRTRLYQFA-----------------PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 5 ~~~~~~L~V~~-----------------pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
++..+.|.|.. .+..+.+... +..+.+.+|+.++|.|.+.+. .+.|.|||+
T Consensus 106 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~~--~~~v~W~k~ 173 (256)
T 3tf7_C 106 FGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQS--PRNKVTVTGENVTLSCRQTNS--HNYMYWYRQ 173 (256)
T ss_dssp ECCCEEEEEEC---------------------CCEEES--CSEEEEETTCCEEECEEECSC--CSEEEEEEE
T ss_pred ECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEec--CCEEEEeCCCcEEEEEEcCCC--ceEEEEEEE
Confidence 55678898886 2233344432 235678899999999999765 568999993
No 330
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=97.98 E-value=3.1e-06 Score=44.86 Aligned_cols=31 Identities=29% Similarity=0.524 Sum_probs=25.7
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.+.+|+.++|.|.+.+ . +.|+|||+++.+
T Consensus 17 ~~~v~~G~~v~l~C~~~~-~--p~v~W~k~~~~~ 47 (108)
T 2dm7_A 17 TKEASEGATATLQCELSK-V--APVEWKKGPETL 47 (108)
T ss_dssp CCEEETTSCEEEEEEBSS-S--CCCEEESSSSBC
T ss_pred cEEEeCCCcEEEEEEeCC-C--CeeEEEECCEEC
Confidence 357899999999999854 3 689999998765
No 331
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=97.98 E-value=1.3e-05 Score=43.16 Aligned_cols=31 Identities=16% Similarity=0.445 Sum_probs=25.5
Q ss_pred EEeecCCcEEEEEEecCC-CCCceEEEEECCE
Q psy7728 31 IEIRENQEITLECLVKNA-KPAAKIVWYRGNT 61 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~-~P~~~i~W~~~~~ 61 (65)
+.+.+|+.++|.|.+.+. .|.+.|+||+++.
T Consensus 18 v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~ 49 (122)
T 3s35_X 18 IELSVGEKLVLNCTARTELNVGIDFNWEYPSS 49 (122)
T ss_dssp EEEEETCCEEEEEEEEECTTCCCEEEEECSCT
T ss_pred EEEecCCeEEEEEEEEcCCCCcEEEEEECCCc
Confidence 367889999999999752 4668999999876
No 332
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=97.98 E-value=1.6e-06 Score=52.15 Aligned_cols=50 Identities=20% Similarity=0.352 Sum_probs=36.1
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
...+.|+|..+|...... ...+.+.+|+.++|.|.+.+..+.+.|+||++
T Consensus 78 ~~~~~l~V~~~~~~~~~~----~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~ 127 (292)
T 4dkd_C 78 SAAIHLYVKDPARPWNVL----AQEVVVFEDQDALLPCLLTDPVLEAGVSLVRV 127 (292)
T ss_dssp CEEECCEECCSSCCEEES----CSEEEEETTSCEECCEEESSGGGGSSEEEEEG
T ss_pred ceEEEEEEcCcccccccc----CCeEEEcCCCcEEEeeeCCCCCcceeEEEEec
Confidence 456778888877543221 22467899999999999976333388999997
No 333
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=97.98 E-value=4.4e-06 Score=53.25 Aligned_cols=32 Identities=13% Similarity=0.427 Sum_probs=26.8
Q ss_pred eecCCcEEEEEEecCCCC-CceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKP-AAKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P-~~~i~W~~~~~~l~ 64 (65)
..+|+.++|.|.+.+.+| .+.|+|+|||+++.
T Consensus 286 ~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~ 318 (376)
T 2aty_A 286 QMAKDKVSLTCMITDFFPEDITVEWQWNGQPAE 318 (376)
T ss_pred HhcCCceEEEEEEEEeECCCcEEEEEECCEECC
Confidence 345899999999988776 57899999998764
No 334
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=97.97 E-value=1.8e-05 Score=51.17 Aligned_cols=32 Identities=31% Similarity=0.673 Sum_probs=27.4
Q ss_pred eecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
+.+|+.++|.|.+.+.+|+ +.|+|+|||+++.
T Consensus 362 v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 394 (475)
T 1iga_A 362 LALNELVTLTCLARGFSPKDVLVRWLQGSQELP 394 (475)
T ss_pred hccCCceEEEEEEeeeECCCCEEEEEECCEECC
Confidence 5789999999999887664 6999999999874
No 335
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=97.96 E-value=5.6e-06 Score=46.71 Aligned_cols=32 Identities=25% Similarity=0.592 Sum_probs=24.1
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+.+|+.++|.|.+.+ .|.+.+.||+++..+
T Consensus 12 ~~v~~G~~v~l~C~~~~-~p~~~v~W~~~~~~~ 43 (189)
T 2v5t_A 12 QEFKQGEDAEVVCRVSS-SPAPAVSWLYHNEEV 43 (189)
T ss_dssp EEEETTSCEEECCEEEC-SSCCEEEEEC-----
T ss_pred EEEeCCCcEEEEEEEcC-CCCCEEEEEECCccc
Confidence 46889999999999964 689999999998765
No 336
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=97.95 E-value=2e-06 Score=57.87 Aligned_cols=56 Identities=18% Similarity=0.246 Sum_probs=9.9
Q ss_pred CCCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 6 GPRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 6 ~~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+.|+|..+|....... ......+.+|+.++|.|.+. ++|++.|+|||||+.+.
T Consensus 317 ~~~~~l~V~~~p~~~~~~~--~~~~~~v~~G~~v~l~C~~~-~~p~~~v~W~~~g~~l~ 372 (772)
T 3v2a_R 317 KNSTFVRVHEKPFVAFGSG--MESLVEATVGERVRIPAKYL-GYPPPEIKWYKNGIPLE 372 (772)
T ss_dssp EEEEEEEEECCCC----------------------------------------------
T ss_pred eEEEEEEEeCCCeeEeccC--CCCcEEEcCCCcEEEEEEEe-eeCCCeEEEEECCEeCC
Confidence 4467899998885432211 11234688999999999986 48999999999998764
No 337
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=97.95 E-value=3.6e-05 Score=50.03 Aligned_cols=54 Identities=19% Similarity=0.270 Sum_probs=39.0
Q ss_pred CCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCce-EEEEECCEE
Q psy7728 6 GPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAK-IVWYRGNTE 62 (65)
Q Consensus 6 ~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~-i~W~~~~~~ 62 (65)
+..+.|+|.. +...|.+...+ ....+.+|+.++|.|.+.+ .|.+. |+|||++..
T Consensus 197 s~~~~l~V~~~~~~~p~i~~~~--~~~~v~~G~~v~L~C~~~g-~p~p~~i~W~~~~~~ 252 (524)
T 2ec8_A 197 SEKFILKVRPAFKAVPVVSVSK--ASYLLREGEEFTVTCTIKD-VSSSVYSTWKRENSQ 252 (524)
T ss_dssp CCCEECCEECCCCSCCEEECSC--SEEEEETTSCEEEEEEEEE-SSTTCEEEEEETTCS
T ss_pred EEEEEEEEEeCCCCCCcEEecC--CcceEEcCCcEEEEEEEec-CCCcEEEEEEeCCCC
Confidence 4478899983 22334555433 3457899999999999974 56665 999999876
No 338
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=97.94 E-value=1.2e-05 Score=51.33 Aligned_cols=34 Identities=15% Similarity=0.255 Sum_probs=29.8
Q ss_pred EeecCCcEEEEEEecCCCC---CceEEEEECCEEccC
Q psy7728 32 EIRENQEITLECLVKNAKP---AAKIVWYRGNTELKL 65 (65)
Q Consensus 32 ~~~~G~~~~L~C~~~~~~P---~~~i~W~~~~~~l~~ 65 (65)
.+..|+.++|+|.+.+++| +-.++|||||.++.|
T Consensus 13 ~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG 49 (304)
T 3shs_A 13 CFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN 49 (304)
T ss_dssp SBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC
T ss_pred cccCCCCEEEEEEecCCCCCCCCceEEEEECCccccC
Confidence 4788999999999999999 568999999988764
No 339
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=97.93 E-value=1.8e-05 Score=46.87 Aligned_cols=29 Identities=7% Similarity=0.289 Sum_probs=24.2
Q ss_pred EEeecCCcEEEEEEecCCC-CCceEEEEEC
Q psy7728 31 IEIRENQEITLECLVKNAK-PAAKIVWYRG 59 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~ 59 (65)
+.+.+|+.++|.|.+.+.. +.+.|.|||+
T Consensus 141 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 170 (250)
T 3esu_F 141 ELVKPGASVKISCKDSGYAFSSSWMNWVKQ 170 (250)
T ss_dssp EEECTTCCEEEEEECCSTTGGGSEEEEEEE
T ss_pred eEEcCCceEEEEEEecCCcccCCEEEEEEE
Confidence 5789999999999996532 3789999997
No 340
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=97.93 E-value=1e-05 Score=49.21 Aligned_cols=32 Identities=19% Similarity=0.470 Sum_probs=26.2
Q ss_pred eecCCcEEEEEEecCCC--C-CceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAK--P-AAKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~--P-~~~i~W~~~~~~l~ 64 (65)
+..|+.++|+|.+.+.. | +..|+|||||+++.
T Consensus 36 l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~ 70 (240)
T 4acp_A 36 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVH 70 (240)
T ss_dssp HSSSSCCEEEEEEESCCC--CCCEEEEEETTEEEC
T ss_pred cccCCCcEEEEEEeccccCCCccEEEEEECCcccC
Confidence 44699999999999887 5 45899999999863
No 341
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=97.92 E-value=2.5e-05 Score=51.51 Aligned_cols=56 Identities=21% Similarity=0.525 Sum_probs=38.2
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNT 61 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~ 61 (65)
++..++|+|.. ++..|.|......... ..+|+.++|.|.+.++.|.+ .|+|++++.
T Consensus 119 ~~~~~~L~V~~~~~~~P~i~~~~~~~~~-~~~~~~v~L~C~~~g~~P~p~~v~W~~~~~ 176 (512)
T 1zvo_C 119 WGQGTTVHVSSAPTKAPDVFPIISGCRH-PKDNSPVVLACLITGYHPTSVTVTWYMGTQ 176 (512)
T ss_pred ccCceEEEecccCCcCCeEEeccCCccc-ccCCCeEEEEEEEEeeecCceEEEEEcCcc
Confidence 46778999985 4456666522211010 23468999999999887875 999999764
No 342
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=97.92 E-value=2.6e-05 Score=47.09 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=24.1
Q ss_pred EEeecCCcEEEEEEecCCCC-CceEEEEEC
Q psy7728 31 IEIRENQEITLECLVKNAKP-AAKIVWYRG 59 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~ 59 (65)
..+.+|+.++|+|.+.+..| .+.+.|||+
T Consensus 161 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 190 (268)
T 1x9q_A 161 GLVQPGGAMKLSCVTSGFTFGHYWMNWVRQ 190 (268)
T ss_dssp EEECTTCCEEEEEEEESSCGGGCEEEEEEE
T ss_pred eEecCCCcEEEEEEecCccccccEEEEEEe
Confidence 47899999999999976543 388999995
No 343
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=97.91 E-value=2.6e-05 Score=41.93 Aligned_cols=30 Identities=23% Similarity=0.634 Sum_probs=25.1
Q ss_pred eEEeecCCcEEEEEEecCCC-CCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAK-PAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~ 59 (65)
.+.+.+|++++|.|...+.. |.+.+.|||+
T Consensus 9 ~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (111)
T 2ywz_A 9 TITKETGESLTIKCVLKDHSCGLSSTTWYRT 39 (111)
T ss_dssp EEEECTTCCEEEEEEEESCSSCCCEEEEEEE
T ss_pred cEEEccCCCEEEEeEECCCCCCCCEEEEEEe
Confidence 35789999999999987643 6789999995
No 344
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=97.91 E-value=6.9e-06 Score=49.52 Aligned_cols=50 Identities=10% Similarity=0.234 Sum_probs=36.8
Q ss_pred CCEEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEE-ECCEEc
Q psy7728 7 PRTRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWY-RGNTEL 63 (65)
Q Consensus 7 ~~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~-~~~~~l 63 (65)
..+.|.|..+|... + ....+.+.+|+.++|.|.+.+ |. +.++|| +||+.+
T Consensus 82 ~~~~l~V~~~~~~~-~----~~~~~~~~~g~~v~l~C~~~~--p~~~~v~W~~~~g~~l 133 (290)
T 2o26_X 82 SSIYVFVRDPAKLF-L----VGLPLFGKEDSDALVRCPLTD--PQVSQYSLIECDGKSL 133 (290)
T ss_dssp EEEEEEEECSSCCB-C----CCCCEEEETTSCEEECCCBSC--CSCEEEEEEETTSCCC
T ss_pred EEEEEEEeCCCccc-c----cccceEEecCCeEEEeCcCCC--CCCceEEEEeCCCcCC
Confidence 45788888877643 2 122367889999999999973 77 999995 577665
No 345
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=97.91 E-value=2.2e-05 Score=46.90 Aligned_cols=52 Identities=17% Similarity=0.314 Sum_probs=35.2
Q ss_pred cCCCEEEEEEcC------------CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc----eEEEEEC
Q psy7728 5 YGPRTRLYQFAP------------PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA----KIVWYRG 59 (65)
Q Consensus 5 ~~~~~~L~V~~p------------P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~----~i~W~~~ 59 (65)
++..+.|.|..+ ...+.+... +..+.+.+|+.++|.|.+.+ .|.+ .|.|||+
T Consensus 107 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~--p~~~~v~~G~~v~L~C~~~~-~~~~~~~~~v~W~r~ 174 (253)
T 3uzq_A 107 WGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQT--PASLAVSLGQRATISCRASE-NVDRYGNSFMHWYQQ 174 (253)
T ss_dssp ECCCEEEEECSSSCCCCC---------CCEEEE--CSEEEECTTSCEEEEEEESS-CCEETTEECEEEEEE
T ss_pred ECCCcEEEEecCCccccccccCCCcccceEECc--CCeEEEeCCCCEEEEEEecC-ccccCCCcEEEEEEE
Confidence 356788888853 112233322 23467899999999999966 5665 9999994
No 346
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.89 E-value=3.6e-06 Score=53.84 Aligned_cols=30 Identities=20% Similarity=0.492 Sum_probs=24.7
Q ss_pred ecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
..| .++|.|.+.+.+|++ .|+|+|||+++.
T Consensus 360 ~~~-~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 390 (444)
T 1igt_B 360 TKK-QVTLTCMVTDFMPEDIYVEWTNNGKTEL 390 (444)
T ss_dssp TSS-EEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred cCC-eEEEEEEEEeeeCCCCEEEEEECCEEcc
Confidence 445 499999998767776 999999998864
No 347
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=97.89 E-value=3.2e-06 Score=52.04 Aligned_cols=56 Identities=16% Similarity=0.226 Sum_probs=39.8
Q ss_pred CCCEEEEEEcCCC--ccEEEeCCCCCeEEeecCCcEEEEEEec--CCCC-CceEEEEECCEEc
Q psy7728 6 GPRTRLYQFAPPS--SIEIVGHPSNSKIEIRENQEITLECLVK--NAKP-AAKIVWYRGNTEL 63 (65)
Q Consensus 6 ~~~~~L~V~~pP~--~~~i~~~~~~~~~~~~~G~~~~L~C~~~--~~~P-~~~i~W~~~~~~l 63 (65)
...+.|+|..++. .|.+... ...+.+.+|+.++|.|.+. .++| ++.+.|++||+.+
T Consensus 211 ~~~~~l~V~~~~~~~~P~i~~~--~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~ 271 (339)
T 3o4o_C 211 TRSIELRIKKKKEETIPVIISP--LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHI 271 (339)
T ss_dssp EEEEEEEEECCCCCCCCEECCC--SCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCS
T ss_pred EEEEEEEEEcCCCCCCCEEecC--CceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeec
Confidence 3457888886542 3455432 2345688999999999993 4567 8999999998754
No 348
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=97.88 E-value=1.8e-05 Score=48.90 Aligned_cols=32 Identities=28% Similarity=0.500 Sum_probs=27.3
Q ss_pred EeecCCcEEEEEEecCCCC-CceEEEEECCEEcc
Q psy7728 32 EIRENQEITLECLVKNAKP-AAKIVWYRGNTELK 64 (65)
Q Consensus 32 ~~~~G~~~~L~C~~~~~~P-~~~i~W~~~~~~l~ 64 (65)
.+.+|+.++|.|.+.+ .| .+.|+|||+++.+.
T Consensus 139 ~~~~G~~v~L~C~~~g-~p~~~~i~W~k~~~~l~ 171 (329)
T 3oq3_B 139 GTHDKYGIDLYCGILY-AKHYNNITWYKNNQELI 171 (329)
T ss_dssp TSSTTTCEEEECCCCS-CCCCCEEEEEETTEECC
T ss_pred EEeCCCcEEEEeccCC-CCCCceEEEEECCccCC
Confidence 3678999999998855 68 89999999998873
No 349
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=97.88 E-value=2.2e-05 Score=45.07 Aligned_cols=28 Identities=11% Similarity=0.255 Sum_probs=22.7
Q ss_pred EEeecCCcEEEEEEecCCCCC-----ceEEEEEC
Q psy7728 31 IEIRENQEITLECLVKNAKPA-----AKIVWYRG 59 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~-----~~i~W~~~ 59 (65)
+.+.+|+.++|.|.+.+ .|. +.|+|||+
T Consensus 12 v~v~~G~~v~L~C~~~~-~p~~~~~~~~v~W~k~ 44 (202)
T 3bp6_B 12 YTVDVGSSVSLECDFDR-RECTELEGIRASLQKV 44 (202)
T ss_dssp EEEETTSCEEEEEEECT-TC---CTTEEEEEEEC
T ss_pred EEEeCCCcEEEEEEecC-CCCCCccceEEEEEcC
Confidence 46789999999999954 565 89999993
No 350
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.87 E-value=5.8e-05 Score=45.66 Aligned_cols=40 Identities=13% Similarity=0.096 Sum_probs=30.7
Q ss_pred ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 19 SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 19 ~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
+|.|...+.. .+.+|+.++|.|.+.+ ++..+.|||+|+.+
T Consensus 7 kP~i~~~P~~---~v~~G~~VtL~C~~~~--~~~~~~w~k~g~~~ 46 (242)
T 1p6f_A 7 KPFIWAEPHF---MVPKEKQVTICCQGNY--GAVEYQLHFEGSLF 46 (242)
T ss_dssp CCEEEEESCS---EEETTCCEEEEEECCT--TCCEEEEEETTEEE
T ss_pred CCEEEeeCCC---ccCCCCcEEEEEeeCC--CCcEEEEEECCCcc
Confidence 4566654442 6899999999999853 56789999999864
No 351
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=97.87 E-value=3.6e-06 Score=47.84 Aligned_cols=35 Identities=14% Similarity=0.333 Sum_probs=28.6
Q ss_pred CeEEeecCCcEEEEEEecCCCCC-ceEEEEECCEEc
Q psy7728 29 SKIEIRENQEITLECLVKNAKPA-AKIVWYRGNTEL 63 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l 63 (65)
..+.+.+|+.++|.|....+.|. +.|+|||++..+
T Consensus 16 ~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~ 51 (201)
T 3s97_C 16 PEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPV 51 (201)
T ss_dssp CCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTC
T ss_pred ceEEEECCCCEEEeccccccCCCceEEEEEECCcee
Confidence 34688999999999993356788 999999998654
No 352
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=97.87 E-value=1.2e-05 Score=48.94 Aligned_cols=33 Identities=18% Similarity=0.355 Sum_probs=29.1
Q ss_pred EEeecCCcEEEEEEec-----CCCCCceEEEEECCEEc
Q psy7728 31 IEIRENQEITLECLVK-----NAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~-----~~~P~~~i~W~~~~~~l 63 (65)
..+.+|+.++|.|.+. .++|.+.|+|||+|+++
T Consensus 113 ~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l 150 (315)
T 1itb_B 113 QKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPL 150 (315)
T ss_dssp EEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEEC
T ss_pred eEEecCCCeEEEEecccccccCCCCCCEEEEEECCEEC
Confidence 3678999999999983 67899999999999987
No 353
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=97.87 E-value=1.3e-05 Score=49.18 Aligned_cols=33 Identities=21% Similarity=0.397 Sum_probs=28.7
Q ss_pred EeecCCcEEEEEEecC------CCCCceEEEEECCEEcc
Q psy7728 32 EIRENQEITLECLVKN------AKPAAKIVWYRGNTELK 64 (65)
Q Consensus 32 ~~~~G~~~~L~C~~~~------~~P~~~i~W~~~~~~l~ 64 (65)
.+..|++++|.|.+.+ +.|.+.|.|+|||+.+.
T Consensus 15 ~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~g~~i~ 53 (303)
T 1i1r_A 15 VVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIP 53 (303)
T ss_dssp EEETTCCEEEEEEECHHHHHHHTCCGGGEEEEETTEECC
T ss_pred eEeCCCCEEEEEEECCccccccCCChhheEEEECCEECC
Confidence 5789999999999974 46889999999999873
No 354
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=97.85 E-value=1.8e-05 Score=45.86 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=28.2
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
.+.+.+|+.++|.|...++.|.+.|.|+|+|..+
T Consensus 7 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i 40 (193)
T 2if7_A 7 MVNGILGESVTLPLEFPAGEKVNFITWLFNETSL 40 (193)
T ss_dssp EEEEETTSCEEECCCCCCCSCCCEEEEEETTEEE
T ss_pred EEEEEecCeEEEeccCCCcccccEEEEEECCEEE
Confidence 4578899999999998765677899999998654
No 355
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=97.84 E-value=3e-05 Score=42.23 Aligned_cols=31 Identities=23% Similarity=0.574 Sum_probs=26.2
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCE
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNT 61 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~ 61 (65)
.+.+.+|++++|.|.+. +.|.+.|.||+++.
T Consensus 10 ~~~v~~G~~v~L~C~~~-~~p~~~v~W~~~~~ 40 (124)
T 3rbg_A 10 TITVEEGQTLTLKCVTS-LRKNSSLQWLTPSG 40 (124)
T ss_dssp EEEEETTSCEEEEEECC-CCTTCEEEEECTTS
T ss_pred cEEEcCCCCEEEEeEEe-ccCCCEEEEECCCC
Confidence 45789999999999996 56889999998654
No 356
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=97.82 E-value=4.1e-05 Score=40.87 Aligned_cols=30 Identities=13% Similarity=0.462 Sum_probs=25.0
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|++++|.|...+ .|.+.|.|||+.
T Consensus 12 ~~~v~~G~~v~L~C~~~~-~~~~~v~W~r~~ 41 (109)
T 2q20_A 12 SLSASVGDRVTITCQASQ-DISNYLNWYQQK 41 (109)
T ss_dssp EEEECTTCCEEEEEEESS-CCTTCEEEEEEC
T ss_pred EEEecCCCcEEEEEeecc-CCCCcEEEEEEC
Confidence 357899999999999865 467899999964
No 357
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=97.82 E-value=1.6e-05 Score=48.94 Aligned_cols=28 Identities=29% Similarity=0.615 Sum_probs=24.1
Q ss_pred CcEEEEEEecCCCC-CceEEEEECCEEcc
Q psy7728 37 QEITLECLVKNAKP-AAKIVWYRGNTELK 64 (65)
Q Consensus 37 ~~~~L~C~~~~~~P-~~~i~W~~~~~~l~ 64 (65)
+.++|+|.+.+..| .+.|+|||||+.+.
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~ 53 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMD 53 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcc
Confidence 69999999988766 47999999999864
No 358
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=97.81 E-value=3.5e-05 Score=44.47 Aligned_cols=29 Identities=14% Similarity=0.548 Sum_probs=24.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+ .|.+.|+|||+
T Consensus 10 ~~~v~~G~~v~L~C~~~~-~~~~~v~W~k~ 38 (213)
T 3d9a_L 10 TLSVTPGNSVSLSCRASQ-SIGNNLHWYQQ 38 (213)
T ss_dssp EEEECTTCCEEEEEEESS-CCTTCEEEEEE
T ss_pred cEEEeCCCcEEEEEECCC-CCCCCEEEEEe
Confidence 357899999999999855 67889999985
No 359
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=97.81 E-value=4.1e-06 Score=49.97 Aligned_cols=32 Identities=25% Similarity=0.455 Sum_probs=26.8
Q ss_pred EeecCCcEEEEEEecCCCCC--ceEEEEECCEEc
Q psy7728 32 EIRENQEITLECLVKNAKPA--AKIVWYRGNTEL 63 (65)
Q Consensus 32 ~~~~G~~~~L~C~~~~~~P~--~~i~W~~~~~~l 63 (65)
.+.+|+.++|.|.+.+..|. ..|+|||+|+.+
T Consensus 24 ~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~ 57 (231)
T 2w59_A 24 ELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGN 57 (231)
T ss_dssp HHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSC
T ss_pred hcccCCceEEEEEEeCccCCCCeEEEEEcCCeec
Confidence 45789999999999877784 499999998765
No 360
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=97.81 E-value=1.2e-05 Score=51.29 Aligned_cols=31 Identities=13% Similarity=0.470 Sum_probs=25.3
Q ss_pred ecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
.+|..++|.|.+.+.+|+ +.|+|+|||+++.
T Consensus 349 ~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 380 (434)
T 1igy_B 349 MAKDKVSLTCMITDFFPEDITVEWQSDGQAPE 380 (434)
T ss_dssp SSSSEEEEEEEEEEEBCSCEEEEEEETTSCCS
T ss_pred hcCCcEEEEEEEEeeECCCeEEEEEECCEecC
Confidence 457789999999876665 5899999998764
No 361
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.80 E-value=2.3e-05 Score=43.32 Aligned_cols=31 Identities=26% Similarity=0.725 Sum_probs=26.0
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|++++|.|...+..|...|.|||++
T Consensus 17 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~ 47 (136)
T 2d9c_A 17 SVSVAAGESATLRCAMTSLIPVGPIMWFRGA 47 (136)
T ss_dssp EEEEETTSCEEECCEESCCCSCCCCEEEETT
T ss_pred EEEEcCCCCEEEEEEEcCCCCCceEEEEeec
Confidence 3578999999999999765567789999985
No 362
>3c5j_A HLA class II histocompatibility antigen, DR alpha; HLA, MHC class II, glycoprotein, immune response, membrane, transmembrane, GTP-binding, methylation; HET: NAG; 1.80A {Homo sapiens} PDB: 1d5x_A* 1d5z_A* 1d6e_A* 1d5m_A 1fyt_A* 1hqr_A 1j8h_A* 1r5i_A 1seb_A 1zgl_A 2seb_A* 1fv1_A* 2ipk_A* 3pdo_A 3pgc_A 3pgd_A 1ymm_A* 1aqd_A 2g9h_A* 1h15_A ...
Probab=97.80 E-value=2.5e-05 Score=45.98 Aligned_cols=31 Identities=16% Similarity=0.500 Sum_probs=26.3
Q ss_pred ecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
..|..++|.|.+.+..|+ ..|+|+|||+++.
T Consensus 98 ~~~~~~~L~C~a~gFyP~~i~v~W~k~g~~~~ 129 (181)
T 3c5j_A 98 ELREPNVLICFIDKFTPPVVNVTWLRNGKPVT 129 (181)
T ss_dssp CTTSCEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred hcCCCCeEEEEEeEEECCCCEEEEEECCEECC
Confidence 457789999999998887 4899999999873
No 363
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=97.78 E-value=1.9e-05 Score=45.08 Aligned_cols=32 Identities=19% Similarity=0.441 Sum_probs=27.0
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
.+.+.+|+.++|.|.+.+ .|.+.|+|||++..
T Consensus 10 ~~~v~~G~~v~L~C~~~~-~p~~~v~W~~~~~~ 41 (212)
T 1f97_A 10 DVQVPENESIKLTCTYSG-FSSPRVEWKFVQGS 41 (212)
T ss_dssp EEEEETTCCEEEECEEES-CSSEEEEEEEEETT
T ss_pred CeEEEcCCCEEEEeEeCC-CCCcEEEEEECCCc
Confidence 357889999999999974 69999999998743
No 364
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=97.78 E-value=4.6e-05 Score=40.57 Aligned_cols=29 Identities=14% Similarity=0.611 Sum_probs=24.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|++++|.|...+ .|.+.+.|||+
T Consensus 10 ~~~~~~G~~v~L~C~~~~-~~~~~v~W~r~ 38 (107)
T 1i8k_A 10 SLSVATGEKVTIRCMTST-DIDDDMNWYQQ 38 (107)
T ss_dssp EEECCTTCCEEEEEEESS-CCTTCEEEEEE
T ss_pred eEEecCCCCEEEEEEECC-CCCCcEEEEEE
Confidence 357899999999999865 46788999995
No 365
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.77 E-value=3.1e-05 Score=45.55 Aligned_cols=48 Identities=23% Similarity=0.408 Sum_probs=33.0
Q ss_pred cCCCEEEEEEcC---CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEEEECCEEc
Q psy7728 5 YGPRTRLYQFAP---PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~p---P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l 63 (65)
++..++|+|... +..|.+. +..+ .++|.|.+.+..|. +.|+|+++ +.+
T Consensus 108 ~~~~t~L~V~~~~~~~~~P~v~---------~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l 159 (207)
T 1ypz_E 108 FGQGTQVTVEPKSQPPAKPSVF---------IMKN-GTNVACLVKDFYPKEVTISLRSS-KKI 159 (207)
T ss_dssp ECCCEEEEEECCCCCCCCCEEE---------EEEE-TTEEEEEEEEESSSCCEEEEECS-SEE
T ss_pred ecCccEEEEccCCCCCCCCeEE---------EeCC-CCeEEEEEeeEeCCCeEEEEecC-Ccc
Confidence 466789999863 2334432 1122 26999999888776 79999998 554
No 366
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=97.77 E-value=1.7e-05 Score=46.35 Aligned_cols=31 Identities=13% Similarity=0.434 Sum_probs=25.4
Q ss_pred eecCCcEEEEEEecCCC--C-CceEEEEECCEEc
Q psy7728 33 IRENQEITLECLVKNAK--P-AAKIVWYRGNTEL 63 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~--P-~~~i~W~~~~~~l 63 (65)
+.+|+.++|.|.+.+.. | ...|+|||++..+
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~ 48 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEV 48 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEE
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccc
Confidence 67899999999998653 3 3599999999765
No 367
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=97.77 E-value=4.8e-05 Score=43.87 Aligned_cols=29 Identities=14% Similarity=0.468 Sum_probs=25.1
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+ .|.+.|.|||+
T Consensus 10 ~~~v~~G~~v~L~C~~~~-~~~~~v~W~k~ 38 (213)
T 3nl4_L 10 SVSEPVGGTVTIKCQASQ-SISSYLAWYQQ 38 (213)
T ss_dssp EEEEETTCCEEEEEEESS-CCTTCEEEEEE
T ss_pred eEEEcCCCCEEEEEEecC-CCCceEEEEEE
Confidence 357899999999999965 58999999994
No 368
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=97.77 E-value=5.9e-05 Score=46.16 Aligned_cols=39 Identities=13% Similarity=0.295 Sum_probs=29.8
Q ss_pred ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 19 SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 19 ~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
+|.|...+. ..+.+|++++|.|.+. .+.+.+.|||+|+.
T Consensus 7 kP~i~~~P~---~~V~~G~~VtL~C~~~--~~~~~~~W~k~g~~ 45 (257)
T 1b6u_A 7 KPSLLAHPG---PLVKSEETVILQCWSD--VRFQHFLLHREGKF 45 (257)
T ss_dssp CCEECCBSC---SEEESSCCEEEEEEES--SCCSEEEEEEESTT
T ss_pred CCEEEEcCC---CEecCCCCEEEEEecC--CCCcEEEEEECCCC
Confidence 456655443 3678999999999985 35789999999863
No 369
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=97.76 E-value=2.4e-05 Score=47.51 Aligned_cols=31 Identities=23% Similarity=0.499 Sum_probs=26.6
Q ss_pred ecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
.+|+.++|.|.+.+.+|++ .|+|+|||+++.
T Consensus 143 ~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~ 174 (240)
T 4acp_A 143 LTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 174 (240)
T ss_dssp GGSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred hcCCceEEEEEEeEEeCCCcEEEEEECCEECC
Confidence 3488999999999878875 899999999864
No 370
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=97.75 E-value=4.7e-05 Score=40.59 Aligned_cols=29 Identities=17% Similarity=0.542 Sum_probs=24.2
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
+.+.+|++++|.|...+ .|.+.+.|||+.
T Consensus 11 ~~v~~G~~v~L~C~~~~-~~~~~v~W~r~~ 39 (108)
T 1qfw_M 11 MSMSVGERVTLSCKASE-TVDSFVSWYQQK 39 (108)
T ss_dssp EECCTTCCEEEEEEESS-CCCSCEEEEEEC
T ss_pred EEEcCCCCEEEEeeeCC-CCCcEEEEEEEC
Confidence 57899999999999865 467789999953
No 371
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=97.75 E-value=2.1e-05 Score=50.54 Aligned_cols=31 Identities=19% Similarity=0.470 Sum_probs=25.8
Q ss_pred eecCCcEEEEEEecCCCCCc---eEEEEECCEEc
Q psy7728 33 IRENQEITLECLVKNAKPAA---KIVWYRGNTEL 63 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~~---~i~W~~~~~~l 63 (65)
+.+|+.++|.|.+.+..|++ .|+|||||+++
T Consensus 261 ~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~ 294 (457)
T 1hzh_H 261 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEV 294 (457)
T ss_dssp HCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEE
T ss_pred cccCCceEEEEEEEcccCCCCceEEEEEeCCccc
Confidence 56799999999998654543 99999999876
No 372
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=97.75 E-value=3.5e-05 Score=41.17 Aligned_cols=30 Identities=17% Similarity=0.539 Sum_probs=24.5
Q ss_pred eEEeecCCcEEEEEEecCCC-CCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAK-PAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~ 59 (65)
.+.+.+|++++|.|...+.. |.+.+.|||+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (108)
T 2coq_A 9 IATKETGESLTINCVLRDTACALDSTNWYRT 39 (108)
T ss_dssp EEEECTTCCEEEEEEECCSSEEEEEEEEEEE
T ss_pred eEEEcCCCCEEEEeEeCCCcCCCCEEEEEEc
Confidence 35789999999999986543 4678999996
No 373
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=97.75 E-value=2.3e-05 Score=44.50 Aligned_cols=31 Identities=16% Similarity=0.392 Sum_probs=27.1
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCE
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNT 61 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~ 61 (65)
.+.+.+|+.++|.|.+. +.|.+.|.|||++.
T Consensus 4 ~v~~~~G~~v~L~C~~~-~~~~~~i~W~~~~~ 34 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTAS-QKKSIQFHWKNSNQ 34 (184)
T ss_dssp EEEEETTSCEEECCBCS-SSSCCCEEEEETTC
T ss_pred cEEEeCCCCEEEEEEEc-CCCceEEEEEeCCc
Confidence 35789999999999986 67899999999985
No 374
>1uvq_A HLA class II histocompatibility antigen; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 3pl6_A* 4d8p_A 1s9v_A 2nna_A 1jk8_A*
Probab=97.75 E-value=3.7e-05 Score=45.98 Aligned_cols=31 Identities=32% Similarity=0.532 Sum_probs=26.3
Q ss_pred ecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
..|..++|.|.+.+..|+. .|+|+|||+++.
T Consensus 101 ~~~~~~tL~C~a~gFyP~~i~v~W~kng~~~~ 132 (197)
T 1uvq_A 101 TLGQPNTLICLVDNIFPPVVNITWLSNGQSVT 132 (197)
T ss_dssp CTTSCEEEEEEEEEECSSCCEEEEEETTEEEC
T ss_pred ccCCccEEEEEEEeEcCCCCEEEEEECCEEcc
Confidence 3467899999999988874 899999999873
No 375
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=97.74 E-value=1.4e-05 Score=48.25 Aligned_cols=31 Identities=13% Similarity=0.456 Sum_probs=25.8
Q ss_pred eecCCcEEEEEEecCCC--CCc-eEEEEECCEEc
Q psy7728 33 IRENQEITLECLVKNAK--PAA-KIVWYRGNTEL 63 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~--P~~-~i~W~~~~~~l 63 (65)
+.+|+.++|.|.+.+.. |.+ .|+|||++..+
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~ 62 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEV 62 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEE
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccc
Confidence 56899999999998654 765 99999998654
No 376
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=97.74 E-value=6.5e-05 Score=41.04 Aligned_cols=29 Identities=21% Similarity=0.526 Sum_probs=24.4
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|++++|.|...+ .|.+.+.|||+
T Consensus 12 ~v~v~~G~~vtL~C~~~~-~~~~~v~W~r~ 40 (119)
T 2e27_L 12 SLSASLGGKVTITCKANQ-DIKKKIAWYQH 40 (119)
T ss_dssp EEEEETTCCEEEEEEESS-CCTTCEEEEEE
T ss_pred eEEEeCCCCEEEEEEeCC-CCCceEEEEEE
Confidence 357899999999999865 46789999995
No 377
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=97.73 E-value=5.7e-05 Score=43.57 Aligned_cols=29 Identities=14% Similarity=0.453 Sum_probs=25.1
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+. |.+.|.|||+
T Consensus 10 ~~~v~~G~~v~L~C~~~~~-~~~~v~W~k~ 38 (213)
T 3r06_A 10 SLPASLGDRVTINCQASQD-ISNYLNWYQQ 38 (213)
T ss_dssp EEEECTTCCEEEEEEESSC-CTTCEEEEEE
T ss_pred EEEecCCCcEEEEEEeCCC-cCceEEEEEE
Confidence 3578999999999999764 8999999993
No 378
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=97.73 E-value=1.5e-05 Score=46.00 Aligned_cols=30 Identities=17% Similarity=0.415 Sum_probs=24.2
Q ss_pred EeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 32 EIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 32 ~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
...+|+.++|.|.+.+ |+ .|+|||||+.+.
T Consensus 10 v~~~G~~v~L~C~~~~--~~-~i~W~k~g~~l~ 39 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS--DE-NLKWEKNGQELP 39 (186)
T ss_dssp EEEETTEEEEECSSCC--CT-TCEEEETTEEEC
T ss_pred EEeCCcEEEEEEeCCC--CC-ceEEEECCEECC
Confidence 3478999999999864 33 499999999874
No 379
>3s6c_A Beta-2-microglobulin, T-cell surface glycoprotein membrane-associated; MHC, immunoglobulin domain, immune system, antigen presentat glycosylation; HET: NAG FUC; 2.90A {Homo sapiens}
Probab=97.73 E-value=6e-05 Score=49.20 Aligned_cols=33 Identities=12% Similarity=0.310 Sum_probs=27.8
Q ss_pred eecCCcEEEEEEecCCCCC-ceEEEEECCEEccC
Q psy7728 33 IRENQEITLECLVKNAKPA-AKIVWYRGNTELKL 65 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~~ 65 (65)
...|...+|+|.+.+..|+ ..|+|+|||+++.|
T Consensus 15 ~~~~~~~tL~C~v~~FyP~~i~v~W~~ng~~~~~ 48 (392)
T 3s6c_A 15 AENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEK 48 (392)
T ss_dssp CCSSSCEEEEEEEEEEBSSCCEEEEEETTEECSS
T ss_pred cccCCcEEEEEEEeeEECCCcEEEEEECCeECCC
Confidence 4557788999999999887 68999999998753
No 380
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=97.73 E-value=2.7e-05 Score=46.09 Aligned_cols=31 Identities=13% Similarity=0.380 Sum_probs=25.5
Q ss_pred EEeecCCcEEEEEEec--CCCCCceEEEEECCE
Q psy7728 31 IEIRENQEITLECLVK--NAKPAAKIVWYRGNT 61 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~--~~~P~~~i~W~~~~~ 61 (65)
+.+..|+.++|+|... .+.|.+.|+|||+|.
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~ 35 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGP 35 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSEEEEEEEET
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCC
Confidence 4688999999999632 457999999999863
No 381
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=97.73 E-value=5.7e-05 Score=43.65 Aligned_cols=29 Identities=14% Similarity=0.604 Sum_probs=24.6
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+ .|.+.|.|||+
T Consensus 9 ~~~v~~G~~v~L~C~~~~-~~~~~v~W~~~ 37 (210)
T 1lk3_L 9 ALTVSPGEKLTISCKASE-SVTSRMHWYQQ 37 (210)
T ss_dssp EEEECTTSCEEEEEEESS-CCTTCEEEEEE
T ss_pred cEEEcCCCCEEEEeeCCC-ccCCCEEEEEE
Confidence 457899999999999865 57788999994
No 382
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=97.72 E-value=3.8e-05 Score=45.05 Aligned_cols=31 Identities=19% Similarity=0.530 Sum_probs=26.0
Q ss_pred EEeecCCcEEEEEEecC--CCCCceEEEEECCE
Q psy7728 31 IEIRENQEITLECLVKN--AKPAAKIVWYRGNT 61 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~--~~P~~~i~W~~~~~ 61 (65)
+.+.+|+.++|.|.+.+ ..|.+.|+|||++.
T Consensus 12 v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~ 44 (250)
T 2fbo_J 12 VEVHAGGTVELPCSYQLANDTQPPVISWLKGAS 44 (250)
T ss_dssp EEECTTSCEEECCEEEECSCCSCCEEEEEEEEE
T ss_pred eEEecCCeEEEEEEeEcCCCCCceEEEEEeCCC
Confidence 46889999999999864 26889999999874
No 383
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=97.72 E-value=7e-05 Score=40.91 Aligned_cols=29 Identities=14% Similarity=0.476 Sum_probs=24.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|...+ .|.+.|.|||+
T Consensus 10 ~~~v~~G~~v~L~C~~~~-~~~~~v~W~r~ 38 (120)
T 1mqk_L 10 SLSASVGETVTITCRASE-NIYSYLAWYQQ 38 (120)
T ss_dssp EEEECTTCCEEEEEEESS-CCTTCEEEEEE
T ss_pred eEEEcCCCcEEEEEEeCC-CCCceEEEEEE
Confidence 357899999999999865 46789999995
No 384
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=97.72 E-value=2e-05 Score=47.96 Aligned_cols=54 Identities=20% Similarity=0.345 Sum_probs=38.2
Q ss_pred cCCCEEEEEE-cCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEECCEE
Q psy7728 5 YGPRTRLYQF-APPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRGNTE 62 (65)
Q Consensus 5 ~~~~~~L~V~-~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~~~~ 62 (65)
++..+.|+|. .++..|.+....... ...+|+.++|.|.+.+..| ++.++| |++.
T Consensus 153 ~g~~t~l~V~~~~~~~P~v~~~~~~~--~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~ 208 (267)
T 3u1s_H 153 WGHGTAVTVSSASTKGPSVFPLAPSS--KSTSGGTAALGCLVKDYFPEPVTVSW--NSGA 208 (267)
T ss_dssp ECCCEEEEECCCCCBCCEEEEECCCG--GGEETTEEEEEEEEEEEBSSCCEEEE--GGGT
T ss_pred ecCCeEEEecCCCCCCCEEEEecCCc--ccCCCCcEEEEEEEeEEECCCeEEEE--CCcc
Confidence 5667899998 566667775322211 2357999999999988777 678999 5543
No 385
>1iak_A MHC class II I-AK; histocompatibility antigen, peptide complex, histocompa antigen I-AK; HET: NAG; 1.90A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1d9k_C* 1k2d_A* 1jl4_A 2pxy_C 1u3h_C 2z31_C 1muj_A* 1lnu_A* 3c5z_C 3c60_C 3c6l_C 3rdt_C 2iad_A 1iao_A 1es0_A 3cup_A* 3mbe_A* 1f3j_A*
Probab=97.71 E-value=4.8e-05 Score=45.48 Aligned_cols=31 Identities=32% Similarity=0.548 Sum_probs=26.3
Q ss_pred ecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
..|..++|.|.+.+..|+. .|+|+|||+++.
T Consensus 102 ~~~~~~tL~C~a~gFyP~~i~v~W~kng~~~~ 133 (199)
T 1iak_A 102 LLGQPNTLICFVDNIFPPVINITWLRNSKSVT 133 (199)
T ss_dssp CTTSCEEEEEEEEEECSSCCEEEEEETTEECC
T ss_pred ccCCCcEEEEEEeeEeCCCcEEEEEECCEEcc
Confidence 3467899999999988874 899999999873
No 386
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=97.70 E-value=6e-05 Score=42.48 Aligned_cols=32 Identities=25% Similarity=0.441 Sum_probs=28.6
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
+...+..|+.++|.|.+.+..|.|+|+|.|-+
T Consensus 22 S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~ 53 (122)
T 1xau_A 22 SKHSAWTGELFKIECPVKYCVHRPNVTWCKHN 53 (122)
T ss_dssp EEEEECTTSCEEEEEEEECSSSCCCEEEEEEC
T ss_pred ccEEEecCCeEEEEeEecCCCCCCcEEEEecC
Confidence 44589999999999999998999999999954
No 387
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=97.70 E-value=3.4e-05 Score=45.68 Aligned_cols=53 Identities=17% Similarity=0.314 Sum_probs=36.5
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEECCE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRGNT 61 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~~~ 61 (65)
++..+.|+|.. ++..|.+...... ..+.+|+.++|.|.+.+..| +..++| ++.
T Consensus 113 ~~~~~~l~V~~~~~~~P~v~~~~~~--~~~~~g~~v~L~C~~~~~~P~~~~v~W--~~~ 167 (230)
T 3n9g_H 113 WGQGTLVTVSSASTKGPSVFPLAPS--SKSTSGGTAALGCLVKDYFPEPVTVSW--NSG 167 (230)
T ss_dssp ECCCEEEEECSSCCBCCEEEEECCC--CCCCTTCEEEEEEEEEEEBSSCCEEEE--GGG
T ss_pred cCCCEEEEEEecCCCCCEEEecCCC--ccccCCCCEEEEEEEEeEECCCEEEEE--CCc
Confidence 56778999974 4455566532211 13568999999999988777 567999 554
No 388
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=97.70 E-value=4.8e-05 Score=43.20 Aligned_cols=32 Identities=16% Similarity=0.485 Sum_probs=25.1
Q ss_pred CeEEeecCCcEEEEEEecCCCCCc---eEEEEECCE
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAA---KIVWYRGNT 61 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~---~i~W~~~~~ 61 (65)
..+.+..|+.++|.|.+.+ .|.+ .|+|||++.
T Consensus 7 ~~vtv~~G~~v~L~C~v~~-~~~~~~~~V~W~k~~~ 41 (218)
T 4frw_A 7 DVVTVVLGQDAKLPCFYRG-DSGEQVGQVAWARVDA 41 (218)
T ss_dssp SEEEEETTSCEEECCEECC-CTTCEEEEEEEEEECS
T ss_pred CeEEEEcCCCEEEEEEEEc-CCCCCccEEEEEECCC
Confidence 3467899999999999865 4543 599999874
No 389
>3ov6_A Beta-2-microglobulin, T-cell surface glycoprotein cell surface glycoprotein CD1B; MHC, immunoglobulin domain, immune system, antigen presentat; HET: NAG D12 MK0; 2.50A {Homo sapiens}
Probab=97.68 E-value=5.6e-05 Score=49.47 Aligned_cols=33 Identities=12% Similarity=0.310 Sum_probs=27.8
Q ss_pred eecCCcEEEEEEecCCCCC-ceEEEEECCEEccC
Q psy7728 33 IRENQEITLECLVKNAKPA-AKIVWYRGNTELKL 65 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~~ 65 (65)
...|...+|+|.+.+..|+ ..|+|+|||+++.|
T Consensus 18 ~~~~~~~tL~C~v~gFyP~~i~v~W~~ng~~~~~ 51 (397)
T 3ov6_A 18 AENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEK 51 (397)
T ss_dssp CCTTSCEEEEEEEEEEBSSCEEEEEEETTEECSS
T ss_pred cccCCcEEEEEEEeeEECCCCEEEEEECCeeccc
Confidence 4567788999999999987 68999999998753
No 390
>3c5j_B MHC class II antigen; HLA, MHC class II, glycoprotein, immune response, membrane, transmembrane, GTP-binding, methylation; HET: NAG; 1.80A {Homo sapiens} PDB: 2q6w_B 1a6a_B* 1d5m_B* 1j8h_B* 1d5z_B* 1d5x_B* 1d6e_B* 2seb_B* 2wbj_B* 1ymm_B* 3l6f_B* 3s4s_B 3s5l_B 1fyt_B* 1seb_B 1bx2_B* 1zgl_B 1fv1_B 1h15_B* 1hqr_B ...
Probab=97.68 E-value=3.1e-05 Score=45.53 Aligned_cols=30 Identities=27% Similarity=0.520 Sum_probs=24.6
Q ss_pred cCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 35 ENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 35 ~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
.|..++|.|.+.+..|+. .|+|+|||+++.
T Consensus 109 ~~~~~~L~C~~~gFyP~~i~v~W~~~g~~~~ 139 (190)
T 3c5j_B 109 LQHHNLLVCSVSGFYPGSIEVRWFRNGQEEK 139 (190)
T ss_dssp --CCCEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred cCCceEEEEEEeeEECCceEEEEEECCeEcC
Confidence 467789999999988875 899999999873
No 391
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=97.68 E-value=4.1e-05 Score=51.19 Aligned_cols=32 Identities=13% Similarity=0.430 Sum_probs=27.6
Q ss_pred eecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
...|+.++|.|.+.+.+|+ ..|+|+|||+++.
T Consensus 461 ~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~~ 493 (551)
T 1ntl_A 461 QMAKDKVSLTCMITDFFPEDITVEWQWNGQPAE 493 (551)
T ss_pred hccCCceEEEEEEEEeECCCCEEEEEECCEEcc
Confidence 4568899999999998887 6899999999864
No 392
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=97.67 E-value=7.2e-05 Score=39.47 Aligned_cols=30 Identities=17% Similarity=0.380 Sum_probs=24.0
Q ss_pred EEeecCCcEEEEEEecCCCCCc----eEEEEECC
Q psy7728 31 IEIRENQEITLECLVKNAKPAA----KIVWYRGN 60 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~----~i~W~~~~ 60 (65)
+.+.+|++++|.|....+.+.+ .+.|||++
T Consensus 10 v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 43 (118)
T 3udw_C 10 VPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHG 43 (118)
T ss_dssp EEEETTSCEEECCEEECCTTCCCEEEEEEEEETT
T ss_pred EEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcC
Confidence 4688999999999996555544 49999985
No 393
>1uvq_B HLA class II histocompatibility antigen; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 3pl6_B* 1jk8_B* 2nna_B 1s9v_B 2iad_B 1muj_B* 1d9k_D* 1iak_B* 1jl4_B 1f3j_B* 2pxy_D 1k2d_B* 1u3h_D 2z31_D 3mbe_B* 1aqd_B 3pdo_B 3pgc_B 3pgd_B 1klu_B ...
Probab=97.67 E-value=3.6e-05 Score=45.60 Aligned_cols=29 Identities=31% Similarity=0.586 Sum_probs=22.7
Q ss_pred cCCcEEEEEEecCCCCCc-eEEEEECCEEc
Q psy7728 35 ENQEITLECLVKNAKPAA-KIVWYRGNTEL 63 (65)
Q Consensus 35 ~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l 63 (65)
.|..++|.|.+.+..|+. .|+|+|||+++
T Consensus 107 ~~~~~~L~C~v~gFyP~~i~v~W~~~g~~~ 136 (198)
T 1uvq_B 107 LNHHNLLVCSVTDFYPGQIKVRWFRNDQEE 136 (198)
T ss_dssp ----CEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CCCCcEEEEEEeeEeCCceEEEEEECCEec
Confidence 467789999999988875 89999999986
No 394
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=97.67 E-value=0.00011 Score=39.32 Aligned_cols=29 Identities=21% Similarity=0.589 Sum_probs=23.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|+.++|.|...+. + +.+.|||+.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~-~-~~v~W~r~~ 38 (113)
T 1h5b_A 10 ALSLHEGTDSALRCNFTTT-M-RSVQWFRQN 38 (113)
T ss_dssp EEEEETTCCEEEEEEESSC-C-SEEEEEEEC
T ss_pred EEEEecCCcEEEEEEECCC-C-ceEEEEEEC
Confidence 3578999999999998653 3 689999853
No 395
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=97.66 E-value=3.9e-05 Score=43.79 Aligned_cols=30 Identities=17% Similarity=0.386 Sum_probs=23.2
Q ss_pred EEeecCCcEEEEEEecCCCCCc---eEEEEECCE
Q psy7728 31 IEIRENQEITLECLVKNAKPAA---KIVWYRGNT 61 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~---~i~W~~~~~ 61 (65)
+.+..|++++|.|.+.+. |.+ .|+|||++.
T Consensus 11 V~~~~G~~v~L~C~~~~~-~~~~~~~V~W~k~~~ 43 (225)
T 4fmk_A 11 VRGRLGGTVELPCHLLPP-TTERVSQVTWQRLDG 43 (225)
T ss_dssp EEEETTSCEEECCEECSS-CCCEEEEEEEECTTS
T ss_pred EEEecCCCEEEEEEEECC-CCCceeEEEEEECCC
Confidence 357889999999998654 443 489999864
No 396
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=97.65 E-value=0.00011 Score=43.69 Aligned_cols=30 Identities=17% Similarity=0.519 Sum_probs=25.5
Q ss_pred eEEeecCCcEEEEEEec--CCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVK--NAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~--~~~P~~~i~W~~~ 59 (65)
...+.+|+.++|.|.+. .+.|.+.|+||++
T Consensus 127 ~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~ 158 (268)
T 3mj6_A 127 DLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFS 158 (268)
T ss_dssp EEEEETTCCEEECCBCEESSSSCCCEEEEEEE
T ss_pred ccccccCCcEEEEEEecCCCCCCccceEEEec
Confidence 35788999999999983 5679999999994
No 397
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=97.65 E-value=9.5e-05 Score=39.60 Aligned_cols=30 Identities=10% Similarity=0.467 Sum_probs=24.8
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|++++|.|...+ .+.+.+.|||..
T Consensus 13 ~~~~~~G~~v~L~C~~~~-~~~~~v~W~r~~ 42 (111)
T 1i3g_L 13 FMSTSVGDRVSITCKASQ-DVGTAVAWYQQK 42 (111)
T ss_dssp EEECCTTCCEEEEEEESS-CCTTCEEEEEEC
T ss_pred EEEEcCCCCEEEEEEeCC-CCCCCEEEEEEC
Confidence 357899999999999865 467889999964
No 398
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=97.64 E-value=0.00011 Score=39.63 Aligned_cols=30 Identities=20% Similarity=0.665 Sum_probs=24.1
Q ss_pred eEEeecCCcEEEEEEecCCC-CCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAK-PAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~ 59 (65)
.+.+.+|++++|.|...+.. +...+.|||+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (113)
T 1sq2_N 9 SVTKETGESLTINCVLRDASYALGSTCWYRK 39 (113)
T ss_dssp EEEECTTCCEEEEEEECSCSSCCCCEEEEEE
T ss_pred cEEEecCCCEEEEEEECCCcCCCCEEEEEEe
Confidence 35789999999999986542 3578999996
No 399
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=97.63 E-value=5.7e-05 Score=40.32 Aligned_cols=31 Identities=13% Similarity=0.443 Sum_probs=23.8
Q ss_pred eEEeecCCcEEEEEE-ecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECL-VKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~-~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|++++|.|. ..+..+...+.|||.+
T Consensus 9 ~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~ 40 (109)
T 1pew_A 9 SVSESPGKTVTISCTRSSGNIASNYVQWYQQR 40 (109)
T ss_dssp EEEECTTSCEEEEEEESSSCGGGSCCEEEEC-
T ss_pred CEEEcCCCCEEEEEEeCCCCCCCccEEEEEEC
Confidence 457899999999999 6543224789999976
No 400
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=97.62 E-value=3.7e-05 Score=44.12 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=26.2
Q ss_pred eEEeecCCcEEEEEEec-CCCCCceEEEEECCEEc
Q psy7728 30 KIEIRENQEITLECLVK-NAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~-~~~P~~~i~W~~~~~~l 63 (65)
.+...+|+.++|.|... ...|.+.|+|||++..+
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i 39 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLV 39 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCcee
Confidence 35678999999999432 23577899999999754
No 401
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=97.62 E-value=1.3e-05 Score=51.85 Aligned_cols=34 Identities=18% Similarity=0.527 Sum_probs=29.3
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEECCEEc
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRGNTEL 63 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l 63 (65)
..+.+.+|+.++|.|.+. |.|.|.|+|||+|..+
T Consensus 393 ~~~~v~~G~~v~l~C~~~-g~P~p~i~W~~~~~~~ 426 (477)
T 2id5_A 393 QQVFVDEGHTVQFVCRAD-GDPPPAILWLSPRKHL 426 (477)
T ss_dssp EEEEEETTCCEEECCCEE-EESCCEEEEECTTSCB
T ss_pred ccEEEeCCCeEEEEEecc-ccCCCEEEEEECCccc
Confidence 456899999999999986 4799999999998654
No 402
>1cd1_A CD1, MCD1D.1; immunology, MHC, TCR, glycoprotein, signal, immunoglobulin fold, T-cell; 2.67A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=97.62 E-value=6.9e-05 Score=47.48 Aligned_cols=30 Identities=27% Similarity=0.546 Sum_probs=26.3
Q ss_pred cCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 35 ENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 35 ~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
.+..++|.|.+.+..|+. .++|+|||+++.
T Consensus 197 ~~~~~~L~C~a~gFyP~~i~v~W~~~g~~~~ 227 (315)
T 1cd1_A 197 AHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQ 227 (315)
T ss_dssp SSSCEEEEEEEEEEBSSCEEEEEEETTEECT
T ss_pred CCCceEEEEEEeeeeCCCcEEEEEEccccCC
Confidence 456799999999999987 899999999864
No 403
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=97.61 E-value=2.1e-05 Score=48.90 Aligned_cols=31 Identities=23% Similarity=0.493 Sum_probs=24.9
Q ss_pred ecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
.+|..++|.|.+.+.+|+ +.|+|+|||+.+.
T Consensus 255 ~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 286 (344)
T 1za6_B 255 LTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 286 (344)
T ss_dssp GGSSSEEEEEEEEEEBSSCCEEEEESSSSCCC
T ss_pred ccCCcEEEEEEEeeEECCCeEEEEEECCeECC
Confidence 356679999999876664 7999999998763
No 404
>2bc4_B HLA class II histocompatibility antigen, DM beta chain; MHC class II, immune system; HET: NDG BMA; 2.27A {Homo sapiens} PDB: 1hdm_B 1k8i_B*
Probab=97.61 E-value=6.2e-05 Score=44.96 Aligned_cols=30 Identities=23% Similarity=0.499 Sum_probs=26.2
Q ss_pred ecCCcEEEEEEecCCCCC-ceEEEEECCEEc
Q psy7728 34 RENQEITLECLVKNAKPA-AKIVWYRGNTEL 63 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l 63 (65)
..|..++|.|.+.+..|+ ..|+|+|||+++
T Consensus 108 ~~~~~~~L~C~v~gFyP~~i~v~W~~~g~~~ 138 (211)
T 2bc4_B 108 NTREPVMLACYVWGFYPAEVTITWRKNGKLV 138 (211)
T ss_dssp SCSSSEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred cCCCceEEEEEEeeeECCCcEEEEEECCEEC
Confidence 357789999999998887 589999999987
No 405
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=97.60 E-value=0.0002 Score=39.41 Aligned_cols=31 Identities=26% Similarity=0.508 Sum_probs=22.8
Q ss_pred EEeecCCcEEEEEEecCCC--CCceEEEEECCE
Q psy7728 31 IEIRENQEITLECLVKNAK--PAAKIVWYRGNT 61 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~--P~~~i~W~~~~~ 61 (65)
+.+..|++++|.|...... ....|.|||++.
T Consensus 16 v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~ 48 (139)
T 1pko_A 16 IRALVGDEAELPCRISPGKNATGMEVGWYRSPF 48 (139)
T ss_dssp EEEETTSCEEEEEEEESCCCCTTSEEEEEEC--
T ss_pred EEEEeCCCEEEeeEccCCCCCCceEEEEEECCC
Confidence 4678899999999986432 236899999874
No 406
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=97.59 E-value=2.5e-05 Score=44.53 Aligned_cols=31 Identities=19% Similarity=0.485 Sum_probs=26.2
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
+.+.+|+.++|.|.+.+ .|.+.++|||++..
T Consensus 14 ~~v~~G~~v~L~C~~~~-~p~~~v~W~~~~~~ 44 (209)
T 1nbq_A 14 VRIPENNPVKLSCAYSG-FSSPRVEWKFDQGD 44 (209)
T ss_dssp CCEETTCCCEEECEEES-CSSEEEEEEEEETT
T ss_pred eEEEcCCCEEEEEEEeC-CCCcEEEEEEcCCc
Confidence 46789999999999975 59999999998643
No 407
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=97.59 E-value=0.00012 Score=40.33 Aligned_cols=31 Identities=23% Similarity=0.633 Sum_probs=24.7
Q ss_pred eEEeecCCcEEEEEEecCCC-CCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAK-PAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~~ 60 (65)
.+.+.+|++++|.|...+.. +...+.|||..
T Consensus 9 ~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~ 40 (121)
T 2i24_N 9 RITKETGESLTINCVVRDSRCVLSTGYWYRKP 40 (121)
T ss_dssp EEEEETTCCEEEEEEECSCCCCEEEEEEEEEC
T ss_pred EEEEecCCcEEEEeEccCCCCCCCEEEEEEeC
Confidence 46789999999999986543 45789999953
No 408
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=97.59 E-value=0.00011 Score=42.95 Aligned_cols=27 Identities=11% Similarity=0.262 Sum_probs=23.3
Q ss_pred EeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 32 EIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 32 ~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+|+.++|.|.+.+ .|.+.|+|+++
T Consensus 12 ~~~~G~~v~L~C~~~g-~P~p~i~W~~~ 38 (202)
T 1vca_A 12 LAQIGDSVSLTCSTTG-CESPFFSWRTQ 38 (202)
T ss_dssp EEETTSCEEEEEEEES-CSSCEEEEEET
T ss_pred EEcCCCcEEEEEeecC-CCCCeEEEECC
Confidence 4568999999999964 78999999994
No 409
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=97.59 E-value=0.00017 Score=38.65 Aligned_cols=31 Identities=23% Similarity=0.512 Sum_probs=25.4
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|++++|.|...+..+...+.|||..
T Consensus 7 ~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~ 37 (115)
T 2atp_B 7 SLLVQTNHTAKMSCEVKSISKLTSIYWLRER 37 (115)
T ss_dssp EEEECTTSCEEEEEECCSSCCSSEEEEEEEE
T ss_pred CEEEcCCCcEEEEEEecCCCCcccEEEEEeC
Confidence 4578999999999998654467789999964
No 410
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=97.58 E-value=0.00012 Score=43.28 Aligned_cols=29 Identities=14% Similarity=0.436 Sum_probs=24.8
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+ .|.+.|.|||+
T Consensus 13 ~~~v~~G~~v~L~C~~~~-~~~~~i~W~k~ 41 (250)
T 3esu_F 13 SLSASLGDRVTISCRASQ-DIRNYLNWYQQ 41 (250)
T ss_dssp EEEECTTCCEEEEEEESS-CCTTCEEEEEE
T ss_pred EEEeeCCCcEEEEEEecc-cCCceEEEEEE
Confidence 357889999999999965 67889999995
No 411
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=97.58 E-value=0.00014 Score=38.83 Aligned_cols=31 Identities=19% Similarity=0.394 Sum_probs=24.7
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|++++|.|..........+.|||+.
T Consensus 10 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~ 40 (113)
T 1zox_A 10 EVSGQEQGSLTVQCRYTSGWKDYKKYWCQGV 40 (113)
T ss_dssp EEEEETTSCEEEEEEECGGGTTSCEEEEESS
T ss_pred EEEEeCCCcEEEEeECCCCcccceEEEEeCC
Confidence 4578999999999998654444569999974
No 412
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=97.58 E-value=0.00012 Score=43.43 Aligned_cols=29 Identities=10% Similarity=0.360 Sum_probs=24.8
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+ .|.+.|.|||+
T Consensus 10 ~~~v~~G~~v~L~C~~~~-~~~~~v~W~k~ 38 (242)
T 2znx_A 10 TLSVTPGNSVSLSCRASQ-SIGNNLHXYQQ 38 (242)
T ss_dssp EEEECTTCCEEEEEEESS-CCTTCEEEEEE
T ss_pred eEEEcCCCcEEEEEEeCC-CCCceEEEEEe
Confidence 357899999999999854 67899999995
No 413
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=97.57 E-value=0.00012 Score=43.45 Aligned_cols=30 Identities=10% Similarity=0.282 Sum_probs=24.7
Q ss_pred eEEeecCCcEEEEEEecCCCC----CceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKP----AAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P----~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+..| .+.|.|||+
T Consensus 47 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 80 (254)
T 2c1o_A 47 TLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQ 80 (254)
T ss_dssp EEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEE
T ss_pred eEEecCCCcEEEEeeccCcccccCCCCceEEEEe
Confidence 468999999999999976533 389999984
No 414
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=97.57 E-value=6.1e-05 Score=45.28 Aligned_cols=50 Identities=18% Similarity=0.331 Sum_probs=32.9
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVW 56 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W 56 (65)
++..+.|+|.. ++..|.|...... ..+.+|+.++|+|.+.+..| +..++|
T Consensus 139 ~~~~~~l~V~~~~~~~P~i~~~~~~--~~~~~g~~v~L~C~~~~~~p~~~~v~W 190 (256)
T 3sob_H 139 WGQGTLVTVSSASTKGPSVFPLAPS--SKSTSGGTAALGCLVKDYFPEPVTVSW 190 (256)
T ss_dssp ECCCEEEEECSSCCBCCEEEEECCC-------TTEEEEEEEEEEEBSSCCEEEE
T ss_pred ECCCEEEEEecCCCCCCEEEEECCC--cccccCCcEEEEEEEEEEECCCeEEEE
Confidence 66778999984 4445566532221 14578999999999988777 568999
No 415
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=97.57 E-value=6.4e-05 Score=43.40 Aligned_cols=30 Identities=13% Similarity=0.326 Sum_probs=24.0
Q ss_pred eEEeecCCcEEEEEEecCCCC--CceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKP--AAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P--~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+..+ .+.|.|||+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~ 40 (212)
T 1q0x_L 9 ALTTSPGETVTLTCRSSTGAVTTSNYANWVQE 40 (212)
T ss_dssp EEEECTTCCEEEEEEESSSCCCGGGCCEEEEE
T ss_pred eEeecCCCCEEEEEEecccccCCCCeEEEEEe
Confidence 357899999999999965432 478999996
No 416
>2bc4_A HLA class II histocompatibility antigen, DM alpha chain; MHC class II, immune system; HET: NDG BMA; 2.27A {Homo sapiens} PDB: 1hdm_A 1k8i_A*
Probab=97.57 E-value=6.8e-05 Score=45.04 Aligned_cols=32 Identities=22% Similarity=0.434 Sum_probs=26.8
Q ss_pred eecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
...|...+|.|.+.+..|+ ..|+|+|||+++.
T Consensus 111 ~~~~~~~~L~C~~~gFyP~~i~v~W~~~g~~~~ 143 (211)
T 2bc4_A 111 LEFGKPNTLVCFVSNLFPPMLTVNWQHHSVPVE 143 (211)
T ss_dssp CCTTSCEEEEEEEEEEBSSCEEEEEEETTEEEC
T ss_pred cccCCcceEEEEEeeEeCCCCEEEEEECCEEcC
Confidence 3446789999999999987 6799999999863
No 417
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=97.56 E-value=6.8e-05 Score=39.92 Aligned_cols=31 Identities=10% Similarity=0.281 Sum_probs=24.9
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|++++|.|......+...+.|||+.
T Consensus 5 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~ 35 (110)
T 2q87_A 5 TVAGPVGGSLSVQCPYEKEHRTLNKYWCRPP 35 (110)
T ss_dssp EEEECTTSCEEEEEECCGGGTTSEEEEESCC
T ss_pred EEEEeCCCcEEEEeEecCCcCCceEEEEecC
Confidence 3578999999999998654445789999964
No 418
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=97.56 E-value=7.8e-05 Score=40.10 Aligned_cols=30 Identities=20% Similarity=0.488 Sum_probs=24.7
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|++++|.|......+...+.|||.
T Consensus 9 ~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~ 38 (116)
T 1tvd_A 9 DQTVASGSEVVLLCTYDTVYSNPDLFWYRI 38 (116)
T ss_dssp CEEEETTCCEEECCEEECCSSSCCEEEEEE
T ss_pred cEEEecCCeEEEEeEeEcCCCCcEEEEEEe
Confidence 357899999999999875446678999995
No 419
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=97.55 E-value=0.00015 Score=42.19 Aligned_cols=29 Identities=14% Similarity=0.531 Sum_probs=25.2
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+ .|.+.|.|||+
T Consensus 33 ~~~v~~G~~v~L~C~~~~-~~~~~v~W~k~ 61 (237)
T 3sob_L 33 SLSASVGDRVTITCRASQ-DVSTAVAWYQQ 61 (237)
T ss_dssp EEEEETTCCEEEEEEESS-CCTTCEEEEEE
T ss_pred eEEEeCCCcEEEEEecCC-CCCceEEEEEE
Confidence 468899999999999965 48999999994
No 420
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=97.55 E-value=0.00011 Score=39.33 Aligned_cols=30 Identities=17% Similarity=0.489 Sum_probs=24.9
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
..+.+.+|++++|.|...+. +...+.|||.
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~-~~~~v~W~rq 37 (112)
T 2z35_A 8 GQVALSEEDFLTIHCNYSAS-GYPALFWYVQ 37 (112)
T ss_dssp SEEEEETTCCEEECCEEECS-SCCEEEEEEE
T ss_pred CcEEEcCCCCEEEEEEECCC-CCCeEEEEEE
Confidence 34678999999999998654 6788999995
No 421
>3i84_A Cervical EMMPRIN; CD147, dimerization, cell adhesion, beta-strand swapping; 2.00A {Homo sapiens} PDB: 3i85_A
Probab=97.55 E-value=0.00014 Score=39.59 Aligned_cols=33 Identities=21% Similarity=0.404 Sum_probs=27.6
Q ss_pred EeecCCcEEEEEEecCC-CCCceEEEEECCEEcc
Q psy7728 32 EIRENQEITLECLVKNA-KPAAKIVWYRGNTELK 64 (65)
Q Consensus 32 ~~~~G~~~~L~C~~~~~-~P~~~i~W~~~~~~l~ 64 (65)
.+..|+.++|+|....+ -|.....|+|||+.|.
T Consensus 18 ~~~~gs~v~LtC~l~~s~~~~~~~~W~kng~~L~ 51 (98)
T 3i84_A 18 VEDLGSKILLTCSLDDSATEVTGHRWLKGGVVLK 51 (98)
T ss_dssp EEEETTEEEEEEEECCC-CCEEEEEEEETTEEEE
T ss_pred cEeCCCeEEEEEcCCCCCCCccCCEEeECCEECc
Confidence 45779999999999877 5667789999999874
No 422
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=97.54 E-value=0.00011 Score=39.21 Aligned_cols=30 Identities=17% Similarity=0.432 Sum_probs=23.7
Q ss_pred eEEeecCCcEEEEEEecCCC---CCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAK---PAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~---P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|...+.. ..+.+.|||+
T Consensus 10 ~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 42 (111)
T 1j05_L 10 SLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQ 42 (111)
T ss_dssp EEECCTTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred EEEEeCCCCEEEEeecCCCcccCCCceEEEEEe
Confidence 35789999999999986542 1578999996
No 423
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=97.54 E-value=9.3e-05 Score=39.74 Aligned_cols=30 Identities=13% Similarity=0.443 Sum_probs=23.7
Q ss_pred eEEeecCCcEEEEEEecCCCC-----CceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKP-----AAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P-----~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|...+... .+.+.|||.
T Consensus 10 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~ 44 (114)
T 1eeq_A 10 SLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQ 44 (114)
T ss_dssp EEEECTTSCEEEEEEESSCCEETTTTEECEEEEEE
T ss_pred eEEEcCCCeEEEEEEcCCCccccccCCccEEEEEE
Confidence 357899999999999865432 368999995
No 424
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=97.54 E-value=0.00014 Score=49.20 Aligned_cols=33 Identities=30% Similarity=0.547 Sum_probs=29.6
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEEcc
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTELK 64 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~l~ 64 (65)
..+.+|+++.+.|... |.|.|.|+|||++++|.
T Consensus 492 ~~v~~G~~~~~~~~v~-g~P~P~v~W~k~~~el~ 524 (573)
T 3uto_A 492 TEVGEGQSANFYCRVI-ASSPPVVTWHKDDRELK 524 (573)
T ss_dssp EEECTTSCEEEEEEEE-CSSCCEEEEEETTEECC
T ss_pred cEEeCCCcEEEEEEEE-ccCCCeEEEEECCEEcc
Confidence 5789999999999996 47999999999999874
No 425
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=97.54 E-value=4.9e-05 Score=47.31 Aligned_cols=31 Identities=16% Similarity=0.392 Sum_probs=27.2
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCE
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNT 61 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~ 61 (65)
.+.+.+|+.++|.|.+. +.|.+.|+|||++.
T Consensus 3 ~v~~~~G~~v~L~C~~~-~~p~~~v~W~k~~~ 33 (363)
T 1wio_A 3 VVLGKKGDTVELTCTAS-QKKSIQFHWKNSNQ 33 (363)
T ss_dssp EEEEETTSCEEECCCCT-TCSSCCEEEEETTC
T ss_pred eEEEeCCCeEEEEEEec-CCCceEEEEEeCCc
Confidence 35789999999999985 68999999999985
No 426
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=97.54 E-value=0.00013 Score=41.96 Aligned_cols=32 Identities=16% Similarity=0.520 Sum_probs=26.2
Q ss_pred eEEeecCCcEEEEEEecCC------CCCceEEEEECCE
Q psy7728 30 KIEIRENQEITLECLVKNA------KPAAKIVWYRGNT 61 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~------~P~~~i~W~~~~~ 61 (65)
.+.+.+|+.++|.|..... .|.+.|.|||++.
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~ 46 (214)
T 2zg1_A 9 SVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGE 46 (214)
T ss_dssp EEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTC
T ss_pred EEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCC
Confidence 4578999999999998753 2678999999864
No 427
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=97.53 E-value=0.00033 Score=37.49 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=28.9
Q ss_pred ccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCE
Q psy7728 19 SIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNT 61 (65)
Q Consensus 19 ~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~ 61 (65)
+|.|...+.. .+..|++|+|.|++.. ....+.|||+|.
T Consensus 9 kPsL~a~P~~---vv~~G~~VtL~C~~~~--~~~~f~l~k~g~ 46 (106)
T 3kgr_A 9 RPSISAEPGT---VIPLGSHVTFVCRGPV--GVQTFRLERESR 46 (106)
T ss_dssp CCEEEEESCS---EEETTCCEEEEEEECT--TCCEEEEEEGGG
T ss_pred CCEEEEeCCC---ccCCCCeEEEEEEccC--CCcEEEEEECCC
Confidence 4667655542 6789999999999854 356899999975
No 428
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=97.53 E-value=0.00013 Score=44.14 Aligned_cols=30 Identities=13% Similarity=0.522 Sum_probs=25.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|+.++|.|.+.+ .|.+.|.|||++
T Consensus 21 ~~~v~~G~~v~L~C~~~~-~p~~~i~W~r~~ 50 (276)
T 3auv_A 21 SLSASVGDRVTITCRASQ-DVSTAVAWYQQK 50 (276)
T ss_dssp EEECCTTCCEEEEEEESS-CCTTCEEEEEEC
T ss_pred eEEEcCCCCEEEEeEcCC-CCCCcEEEEEEC
Confidence 457899999999999964 588999999964
No 429
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=97.51 E-value=0.00016 Score=40.26 Aligned_cols=28 Identities=11% Similarity=0.498 Sum_probs=24.2
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
..+.+.+|+.++|.|.+.+. +.+.|||+
T Consensus 25 ~~~~v~~G~~v~L~C~~~~~---~~v~W~r~ 52 (133)
T 3khq_A 25 RFAAKKRSSMVKFHCYTNHS---GALTWFRK 52 (133)
T ss_dssp SEEEECTTCCEEEEEEESSS---SCEEEEEE
T ss_pred ceEEEeCCCeEEEEEEeCCC---CEEEEEEe
Confidence 34678999999999999764 78999997
No 430
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=97.51 E-value=0.0003 Score=39.12 Aligned_cols=30 Identities=20% Similarity=0.571 Sum_probs=24.9
Q ss_pred eEEeecCCcEEEEEEecCCC-CCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAK-PAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~ 59 (65)
.+.+.+|++++|.|...+.. +...+.|||.
T Consensus 9 ~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq 39 (126)
T 3moq_A 9 TATKETGESLTINCVLRDASFELKDTGWYRT 39 (126)
T ss_dssp EEEEETTCCEEEEEEEESCSSCCCEEEEEEE
T ss_pred eEEEeCCCCEEEEEEeecCccCCceEEEEEe
Confidence 46789999999999987643 6678999994
No 431
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=97.50 E-value=5.8e-05 Score=45.30 Aligned_cols=52 Identities=29% Similarity=0.418 Sum_probs=35.0
Q ss_pred CCEEEEEEcC-CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 7 PRTRLYQFAP-PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 7 ~~~~L~V~~p-P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
..+.+.|++. |..+.+........+.+.+|+.++|.|.+. .|.+.++|++++
T Consensus 80 ~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~--~p~~~v~w~~~~ 132 (289)
T 3mjg_X 80 ERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT--DPQLVVTLHEKK 132 (289)
T ss_dssp CCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS--CTTSCEEEEESS
T ss_pred cEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC--CCCceEEEEeCC
Confidence 4567777775 544433211111125789999999999996 578899999974
No 432
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=97.50 E-value=9.7e-05 Score=39.30 Aligned_cols=31 Identities=19% Similarity=0.403 Sum_probs=24.9
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|+.++|.|......+...+.|||+.
T Consensus 6 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~ 36 (116)
T 2or8_A 6 EVKGVVGHPVTLPCTYSTYRGITTTCWGRGQ 36 (116)
T ss_dssp EEEEETTSCEEECCBCCCTTCCCCEEEEESC
T ss_pred eEEEEeCCcEEEEEEeeCCCCCcEEEEEEEC
Confidence 3578999999999997654456679999975
No 433
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=97.50 E-value=0.00021 Score=38.27 Aligned_cols=30 Identities=10% Similarity=0.369 Sum_probs=23.9
Q ss_pred eEEeecCCcEEEEEEecCCCC----CceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKP----AAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P----~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|...+... ...+.|||.
T Consensus 10 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq 43 (113)
T 1dlf_L 10 SLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQ 43 (113)
T ss_dssp EEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred EEEEcCCCCEEEEEEccccccccCCCceEEEEEE
Confidence 457899999999999865431 478999985
No 434
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=97.49 E-value=9.8e-05 Score=42.79 Aligned_cols=31 Identities=16% Similarity=0.428 Sum_probs=24.3
Q ss_pred eEEeecCCcEEEEEEecCCCC-CceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKP-AAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~~ 60 (65)
.+.+.+|+.++|.|.+.++.| .+.|.|||++
T Consensus 9 ~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~ 40 (216)
T 2xzc_L 9 SVSAAPGQKVTISCSGSSSNIGNNYVSWYQQL 40 (216)
T ss_dssp EEEECTTCCEEEEEECCTTTGGGSCCEEEEEC
T ss_pred cEEecCCCeEEEEEEeecCCCCCCeEEEEEeC
Confidence 357899999999999545443 6899999953
No 435
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=97.48 E-value=0.00012 Score=48.26 Aligned_cols=49 Identities=24% Similarity=0.540 Sum_probs=34.0
Q ss_pred CEEEEEEcCCCccEEEeCCCCCeEEeecCC-cEEEEEEecCCCCC--ceEEE-EECC
Q psy7728 8 RTRLYQFAPPSSIEIVGHPSNSKIEIRENQ-EITLECLVKNAKPA--AKIVW-YRGN 60 (65)
Q Consensus 8 ~~~L~V~~pP~~~~i~~~~~~~~~~~~~G~-~~~L~C~~~~~~P~--~~i~W-~~~~ 60 (65)
.++|+|..+|.. .+. +.. ...+..|+ .++|+|.+.+..|. +.|+| +||+
T Consensus 283 ~v~L~V~~pP~V-~v~--p~~-~~~~~~G~~~vtL~C~a~GfyP~~~~~VtW~~rdg 335 (401)
T 3f8u_B 283 TLELAVYKPPKV-SLM--PAT-LARAAPGEAPPELLCLVSHFYPSGGLEVEWELRGG 335 (401)
T ss_dssp EEEEEEEBCCEE-EEE--SSS-CCCCCTTCCCCCEEEEEEEEBSSTTCEEEEEEESS
T ss_pred EEEEeeccCCeE-eec--cCc-ceeecCCCccEEEEEEecCCcCCCCcEEEEEecCC
Confidence 478889887743 232 221 01135676 79999999998888 89999 5876
No 436
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=97.48 E-value=0.0001 Score=39.18 Aligned_cols=30 Identities=20% Similarity=0.366 Sum_probs=24.8
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|++++|.|....+.+.+.+.|||+
T Consensus 12 ~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~ 41 (110)
T 2ptt_A 12 DINAYTGSNVTLKIHKDPLGPYRRITWLHT 41 (110)
T ss_dssp SEEEETTSCEEECSCSSCCCSCSEEEEEES
T ss_pred CEEEecCCcEEEeCCccCCCCcCEEEEEec
Confidence 357899999999999744567789999994
No 437
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=97.48 E-value=0.00015 Score=42.09 Aligned_cols=29 Identities=7% Similarity=0.241 Sum_probs=24.1
Q ss_pred EEeecCCcEEEEEEecCCC-CCceEEEEEC
Q psy7728 31 IEIRENQEITLECLVKNAK-PAAKIVWYRG 59 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~ 59 (65)
+.+.+|+.++|.|.+.+.. +.+.|.|||+
T Consensus 10 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 39 (219)
T 1c1e_H 10 ELKKPGETVKISCKASGYMFTNYGMNWVKQ 39 (219)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSEEEEEEE
T ss_pred eEecCCCcEEEEEEEeCcccccceEEEEEe
Confidence 4688999999999997542 4789999997
No 438
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=97.48 E-value=0.00038 Score=39.73 Aligned_cols=29 Identities=24% Similarity=0.502 Sum_probs=24.7
Q ss_pred EeecCCcEEEEEEecCCCCCceEEEEECCE
Q psy7728 32 EIRENQEITLECLVKNAKPAAKIVWYRGNT 61 (65)
Q Consensus 32 ~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~ 61 (65)
.+.+|+.++|.|.. .+.|.+.|+|||++.
T Consensus 10 ~v~~G~~v~L~C~~-~~~~~~~v~W~~~~~ 38 (208)
T 3r4d_A 10 QVAEDNNVLLLVHN-LPLALGAFAWYKGNT 38 (208)
T ss_dssp EEETTCCEEEEEEC-CCSSCSEEEEEESSC
T ss_pred eeecCCcEEEEEeC-CCCCceEEEeccCCC
Confidence 68899999999996 457889999999853
No 439
>3nwm_A Peptide/beta-2microglobulin/MHC class I H-2KD CHI protein; peptide-MHC complex, immunoglobulin fold system; 2.70A {Synthetic}
Probab=97.48 E-value=0.00013 Score=48.49 Aligned_cols=32 Identities=16% Similarity=0.344 Sum_probs=27.4
Q ss_pred ecCCcEEEEEEecCCCCCc-eEEEEECCEEccC
Q psy7728 34 RENQEITLECLVKNAKPAA-KIVWYRGNTELKL 65 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~~ 65 (65)
..+...+|+|.+.+..|+. .|+|+|||+++.+
T Consensus 42 ~~~~~~tL~C~v~gFyP~~I~v~W~~ng~~~~~ 74 (443)
T 3nwm_A 42 ENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPK 74 (443)
T ss_dssp CTTSCEEEEEEEEEEBSSCEEEEEEETTEECSC
T ss_pred cCCCCEEEEEEEcCeECCceEEEEEECCEECCC
Confidence 4467789999999999986 8999999998753
No 440
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=97.47 E-value=0.00015 Score=44.18 Aligned_cols=50 Identities=20% Similarity=0.321 Sum_probs=32.2
Q ss_pred cCCCEEEEEEc-CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCC-ceEEE
Q psy7728 5 YGPRTRLYQFA-PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPA-AKIVW 56 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~-~~i~W 56 (65)
++..+.|+|.. ++..|.|...... ..+.+|+.++|.|.+.+..|. +.|+|
T Consensus 112 ~~~~t~l~V~~~~~~~P~v~~~~~~--~~~~~g~~~~L~C~~~~~~P~~~~v~W 163 (263)
T 3iu4_H 112 WGQGTLVTVSAASTKGPSVFPLAPS--SKGSTSGTAALGCLVKDYFPEPVTVSW 163 (263)
T ss_dssp ECCCEEEEECSSCCBCCEEEEECCC--CCC----EEEEEEEEEEEBSSCCEEEE
T ss_pred eCCceEEEEecccCCCCEEEEccCc--cccccCCcEEEEEEEEeEeCCceEEEE
Confidence 56778999974 4555666532211 124589999999999988874 78999
No 441
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=96.60 E-value=1.7e-05 Score=47.01 Aligned_cols=52 Identities=10% Similarity=0.061 Sum_probs=36.7
Q ss_pred ccCCCEEEEEEcC--CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 4 RYGPRTRLYQFAP--PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 4 ~~~~~~~L~V~~p--P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
.++..++|+|... |..|.|..... ..+.++|.|.+.+..|.++|.|+++...
T Consensus 97 ~fg~gT~L~V~~~~~~~~P~V~~~~~-------~~~~vtL~C~~~gf~P~p~v~~~~~~~~ 150 (185)
T 3c6l_A 97 FFGDGTQLVVKPNIQNPEPAVYQLKD-------PRSQDSTLCLFTDFDSQINVPKTMESGT 150 (185)
Confidence 3567788999854 33455543222 1227899999999999999999877654
No 442
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=97.47 E-value=0.00017 Score=38.83 Aligned_cols=31 Identities=19% Similarity=0.639 Sum_probs=24.8
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
..+.+.+|++++|.|...+..+...+.|||.
T Consensus 8 ~~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq 38 (116)
T 1fo0_A 8 TSISVMEKTTVTMDCVYETQDSSYFLFWYKQ 38 (116)
T ss_dssp CEEEEETTCCEEECCEECCCCSSCEEEEEEE
T ss_pred CcEEEecCCcEEEEeEecCCCCCeEEEEEEe
Confidence 3467899999999999865435568999995
No 443
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=97.46 E-value=0.00048 Score=46.31 Aligned_cols=33 Identities=15% Similarity=0.411 Sum_probs=25.5
Q ss_pred EEeecCCcEEEEEEecCC-CCCceEEEEECCEEc
Q psy7728 31 IEIRENQEITLECLVKNA-KPAAKIVWYRGNTEL 63 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~-~P~~~i~W~~~~~~l 63 (65)
+.+.+|+.++|.|.+.+. +|.+.++||+++..+
T Consensus 234 ~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~ 267 (772)
T 3v2a_R 234 IELSVGEKLVLNCTARTELNVGIDFNWEYPSSKH 267 (772)
T ss_dssp EEEETTCCEEEEEEEEECTTCCCEEEEECC----
T ss_pred eEEecCCcEEEEEEEecCCCCceeEEEecCCccC
Confidence 578999999999999754 577899999998763
No 444
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.46 E-value=0.00015 Score=42.54 Aligned_cols=29 Identities=17% Similarity=0.453 Sum_probs=24.4
Q ss_pred eEEeecCCcEEEEEEecCCCC----CceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKP----AAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P----~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+ .| .+.|.|||+
T Consensus 10 ~~~v~~G~~v~L~C~~~~-~~~~~~~~~i~W~k~ 42 (240)
T 1moe_A 10 SLAVSLGQRATMSCRAGE-SVDIFGVGFLHWYQQ 42 (240)
T ss_dssp EEEECTTSCEEEEEEESS-CCEETTEECEEEEEE
T ss_pred eEEecCCCCEEEEEeCCC-ccccCCCceEEEEEE
Confidence 357899999999999965 45 789999995
No 445
>1onq_A T-cell surface glycoprotein CD1A; protein-glycolipid complex, beta sheet platform,, immune SYS; HET: NAG FUC SLF; 2.15A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 1xz0_A*
Probab=97.46 E-value=0.00011 Score=45.96 Aligned_cols=31 Identities=26% Similarity=0.490 Sum_probs=26.1
Q ss_pred cCCcEEEEEEecCCCCC-ceEEEEECCEEccC
Q psy7728 35 ENQEITLECLVKNAKPA-AKIVWYRGNTELKL 65 (65)
Q Consensus 35 ~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~~ 65 (65)
.+..++|.|.+.+..|+ ..|+|+|||+++.|
T Consensus 198 ~~~~~~L~C~a~gFyP~~I~v~W~~~g~~~~~ 229 (283)
T 1onq_A 198 GPGHLQLVCHVSGFYPKPVWVMWMRGEQEQQG 229 (283)
T ss_dssp STTEEEEEEEEEEEBSSCCEEEEEETTEECTT
T ss_pred CCCceeEEEEEEeEECCceEEEEEECCeecCC
Confidence 35678999999998886 58999999998753
No 446
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.46 E-value=6.3e-05 Score=43.42 Aligned_cols=29 Identities=10% Similarity=0.414 Sum_probs=24.3
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+ .+.|.+.|.|||+
T Consensus 8 ~~~v~~G~~v~L~C~~-~~~~~~~v~W~k~ 36 (212)
T 1nfd_E 8 SASVTVGETVKITCSG-DQLPKNFAYWFQQ 36 (212)
T ss_dssp EEEEETTSCCCEEEEE-TTGGGSCCEEEEE
T ss_pred eEEEeCCCcEEEEEec-CCCCCCeEEEEEE
Confidence 3578999999999997 4567788999995
No 447
>3usa_D HLA class II histocompatibility antigen, DO beta; MHC class II fold, antigen presentation enzyme and inhibitor system; HET: NAG MAN PGE; 3.20A {Homo sapiens}
Probab=97.46 E-value=0.00024 Score=42.56 Aligned_cols=31 Identities=29% Similarity=0.465 Sum_probs=26.2
Q ss_pred ecCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
..|...+|.|.+.|..|+. .|+|+|||+++.
T Consensus 105 ~~~~~~~L~C~a~gFyP~~I~v~W~knG~~~~ 136 (189)
T 3usa_D 105 LLHQHNLLHCSVTGFYPGDIKIKWFLNGQEER 136 (189)
T ss_dssp CTTSCEEEEEEEEEEBSSCEEEEEEETTEECC
T ss_pred cCCCccceEEEEeeeECCeeEEEEEECCcccc
Confidence 4567889999999998875 599999999863
No 448
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=97.45 E-value=6.9e-05 Score=46.61 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=26.6
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
.+.+..|++++|.|.+.+..|.+.|+|++++..
T Consensus 15 ~v~~~~G~~v~l~C~~~~~~~~~~i~W~~~~~~ 47 (325)
T 1n26_A 15 VLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPA 47 (325)
T ss_dssp EEEECTTCCEEEECTTSCTTCCSEEEEEEECSS
T ss_pred cEECCCCCcEEEEeCCCCCCCCceEEEEECCcc
Confidence 345579999999999876556899999998754
No 449
>3lqz_A HLA class II histocompatibility antigen, DP alpha; MHC, immune, disulfide bond, glycoprotein, immune respo membrane, MHC II, transmembrane, immune system; HET: NAG NDG; 3.25A {Homo sapiens}
Probab=97.45 E-value=0.00015 Score=42.81 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=25.8
Q ss_pred cCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 35 ENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 35 ~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
.|...+|+|.+.+..|+ ..++|+|||+++.
T Consensus 99 ~~~~~~L~C~v~gFyP~~i~v~W~~ng~~~~ 129 (181)
T 3lqz_A 99 LGQPNTLICHIDKFFPPVLNVTWLCNGELVT 129 (181)
T ss_dssp TTCCEEEEEEEEEEBSCCCEEEEEETTEECC
T ss_pred cCCCeEEEEEEeeeECCCCEEEEEECCEECc
Confidence 36778999999999886 5899999999873
No 450
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.44 E-value=0.00048 Score=41.36 Aligned_cols=48 Identities=21% Similarity=0.398 Sum_probs=33.1
Q ss_pred cCCCEEEEEEc---CCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCc-eEEEEECCEEc
Q psy7728 5 YGPRTRLYQFA---PPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAA-KIVWYRGNTEL 63 (65)
Q Consensus 5 ~~~~~~L~V~~---pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l 63 (65)
++..++|+|.. .+..|.+.. ... ..+|.|.+.+..|.+ .|+|++| +++
T Consensus 109 ~g~gt~L~V~~~~~~~~~P~v~~--------~~~--~~~L~C~~~g~~P~~i~v~W~~~-~~~ 160 (229)
T 1hxm_A 109 FGKGTRVTVEPRSQPHTKPSVFV--------MKN--GTNVACLVKEFYPKDIRINLVSS-KKI 160 (229)
T ss_dssp EBCCEEEEEECCSCCCBCCEEEE--------EEE--TTEEEEEEESCBSSCCEEEEECS-SEE
T ss_pred cCccEEEEEeccCCCCcCCcEEE--------cCC--CCeEEEEEEEEeCCCEEEEEecC-CEE
Confidence 56678999985 333444432 111 248999999988875 8999999 654
No 451
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=97.44 E-value=0.00019 Score=38.98 Aligned_cols=32 Identities=16% Similarity=0.424 Sum_probs=25.4
Q ss_pred EEeecCCcEEEEEEecCC-CCCceEEEEECCEE
Q psy7728 31 IEIRENQEITLECLVKNA-KPAAKIVWYRGNTE 62 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~-~P~~~i~W~~~~~~ 62 (65)
+.+..|+.++|.|...+. .+...|.|||++..
T Consensus 13 v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~ 45 (117)
T 3q0h_A 13 ISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQL 45 (117)
T ss_dssp EEEETTCCEEECEEEESCCCEEEEEEEEETTEE
T ss_pred EEEecCCCEEEEEEecCCCCCEEEEEEEeCCEE
Confidence 578999999999998763 33457999998754
No 452
>2p24_A H-2 class II histocompatibility antigen, A-U ALPH; MHC, I-AU, immunoglobulin fold, MBP, immune system; 2.15A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=97.44 E-value=0.00014 Score=44.46 Aligned_cols=31 Identities=32% Similarity=0.533 Sum_probs=26.2
Q ss_pred ecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 34 RENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 34 ~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
..|...+|.|.+.+..|+ ..|+|+|||+++.
T Consensus 132 ~~~~~~tL~C~~~gFyP~~i~v~W~kng~~~~ 163 (236)
T 2p24_A 132 LLGQPNTLICFVDNIFPPVINITWLRNSKSVA 163 (236)
T ss_dssp CTTCCEEEEEEEEEECSSCCEEEEEETTEEEC
T ss_pred ccCCcceEEEEEEEEcCCCeEEEEEECCEEcC
Confidence 356779999999998887 5899999999873
No 453
>3usa_C HLA class II histocompatibility antigen, DO alpha; MHC class II fold, antigen presentation enzyme and inhibitor system; HET: NAG MAN PGE; 3.20A {Homo sapiens}
Probab=97.43 E-value=0.00028 Score=42.00 Aligned_cols=32 Identities=28% Similarity=0.548 Sum_probs=27.1
Q ss_pred eecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
...|...+|+|.+.+..|+ ..|+|+|||+++.
T Consensus 97 ~~~~~~~tL~C~v~gFyP~~i~v~W~~ng~~v~ 129 (181)
T 3usa_C 97 VELGQPNILICIVDNIFPPVINITWLRNGQTVT 129 (181)
T ss_dssp CCTTSCEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred CCCCCceEEEEEEEEEeCCCCEEEEEECCEEcc
Confidence 5567788999999999886 5799999999874
No 454
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=97.43 E-value=0.00018 Score=41.49 Aligned_cols=29 Identities=17% Similarity=0.457 Sum_probs=24.8
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEE
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYR 58 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~ 58 (65)
.+.+.+|+.++|.|.+.+..|.+.|.|||
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k 37 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTYTIEWYQ 37 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTCCEEEEE
T ss_pred cEEECCCCcEEEEEECCCCCCCcEEEEEE
Confidence 35789999999999996543889999999
No 455
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=97.43 E-value=0.00022 Score=41.75 Aligned_cols=28 Identities=21% Similarity=0.496 Sum_probs=24.0
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|. . +.|.+.|.|||+
T Consensus 9 ~~~v~~G~~v~L~C~-~-~~~~~~i~W~k~ 36 (238)
T 2p1y_A 9 NKVAVTGGKVTLSCN-Q-TNNHNNMYWYRQ 36 (238)
T ss_dssp EEEEETTCCEEEEEE-E-CSCCSEEEEEEE
T ss_pred ceEEeCCCEEEEEee-c-CCCCccEEEEEE
Confidence 357899999999999 3 468899999995
No 456
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.43 E-value=7.5e-05 Score=43.62 Aligned_cols=30 Identities=17% Similarity=0.410 Sum_probs=24.4
Q ss_pred eEEeecCCcEEEEEEecCCCCCc-eEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAA-KIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~-~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+..|.+ .|+|||+
T Consensus 28 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 58 (234)
T 2j6e_L 28 SASGTPGQRVTISCSGSSSNIGSNYVYWYQQ 58 (234)
T ss_dssp CCCBCTTCEEEEEEECCTTTTTTSCCEEEEE
T ss_pred cEEeeCCCcEEEEEEecCCCCCCCeEEEEEe
Confidence 34689999999999997655545 7999996
No 457
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=97.42 E-value=0.00015 Score=39.22 Aligned_cols=29 Identities=17% Similarity=0.345 Sum_probs=24.0
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
+.+.+|++++|.|....+.+...+.|||.
T Consensus 10 v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq 38 (114)
T 2hp4_A 10 RTWNLGETVELKCQVLLSNPTSGASWLFQ 38 (114)
T ss_dssp CCCCTTCCEEEEEEECCSSCCSCEEEEEE
T ss_pred EEEcCCCCEEEEEEeecCCCCceEEEEEE
Confidence 46889999999999876555678999984
No 458
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=97.42 E-value=0.00054 Score=38.11 Aligned_cols=31 Identities=19% Similarity=0.361 Sum_probs=25.1
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
..+.+.+|+.++|.|....+.....+.|||.
T Consensus 17 ~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq 47 (134)
T 3bik_B 17 AWLTVSEGANATFTCSLSNWSEDLMLNWNRL 47 (134)
T ss_dssp SEEEEETTSCEEEEEEESSCCTTCEEEEEEE
T ss_pred CeEEEeCCCCEEEEEEeCCCCCCcEEEEEEc
Confidence 3568999999999999875433578999995
No 459
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=97.42 E-value=0.00025 Score=41.91 Aligned_cols=29 Identities=10% Similarity=0.363 Sum_probs=24.2
Q ss_pred eEEeecCCcEEEEEEecCCCC-----CceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKP-----AAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P-----~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+ .| .+.|.|||+
T Consensus 10 ~~~v~~G~~v~L~C~~~~-~~~~~~~~~~v~W~~~ 43 (247)
T 1svz_A 10 YLPVSLGDQASISCRSSQ-TIVHNNGNTYLEWYLQ 43 (247)
T ss_dssp EEEECTTCCEEEEEEESS-CCBCTTSCBCEEEEEE
T ss_pred eEEecCCCCEEEEEeCCC-cccccCCCceEEEEEE
Confidence 357899999999999965 45 689999994
No 460
>2h26_A CD1B antigen, T-cell surface glycoprotein CD1B; lipid, endogenous ligand, phosphatidylcholine, MHC, antigen presentation, immune system; HET: NAG FUC 6PL 6UL; 1.80A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1 PDB: 3t8x_A* 1gzq_A* 1gzp_A* 1uqs_A* 3l9r_A*
Probab=97.42 E-value=0.00012 Score=45.89 Aligned_cols=30 Identities=27% Similarity=0.557 Sum_probs=25.7
Q ss_pred cCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 35 ENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 35 ~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
.+..++|+|.+.+..|+. .|+|+|||+++.
T Consensus 198 ~~~~~~L~C~a~gFyP~~I~v~W~~~g~~~~ 228 (286)
T 2h26_A 198 GPGRLQLVCHVSGFYPKPVWVMWMRGEQEQQ 228 (286)
T ss_dssp STTEEEEEEEEEEEBSSCEEEEEEETTEECT
T ss_pred CCCcceEEEEEEEEECCceEEEEEECCeEcc
Confidence 356789999999998875 799999999864
No 461
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=97.41 E-value=0.00034 Score=37.99 Aligned_cols=30 Identities=23% Similarity=0.606 Sum_probs=24.4
Q ss_pred EEeecCCcEEEEEEec--CCCCCceEEEEECC
Q psy7728 31 IEIRENQEITLECLVK--NAKPAAKIVWYRGN 60 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~--~~~P~~~i~W~~~~ 60 (65)
+.+.+|+.++|.|... .+.+.+.|.|||++
T Consensus 14 v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~ 45 (135)
T 1xt5_A 14 VEVHAGGTVELPCSYQLANDTQPPVISWLKGA 45 (135)
T ss_dssp EEEETTSCEEECCEEEEETCCSCCEEEEEEES
T ss_pred EEEeCCCCEEEeeEeecCCCCCccEEEEEeeC
Confidence 4678999999999864 23578899999975
No 462
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=97.41 E-value=0.00027 Score=42.05 Aligned_cols=31 Identities=10% Similarity=0.353 Sum_probs=25.3
Q ss_pred CeEEeecCCcEEEEEEecCCCC-----CceEEEEECC
Q psy7728 29 SKIEIRENQEITLECLVKNAKP-----AAKIVWYRGN 60 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P-----~~~i~W~~~~ 60 (65)
..+.+.+|+.++|.|.+.+ .| .+.|.|||++
T Consensus 42 ~~~~v~~G~~v~L~C~~~~-~~~~~~~~~~v~W~k~~ 77 (252)
T 3bkj_L 42 LSLPVNLGEQASISCRSSQ-SIVHSNGHTYLEWYLQR 77 (252)
T ss_dssp SEEEECTTSCEEEEEEESS-CCBCTTSCBCEEEEEEC
T ss_pred ceEEEeCCCcEEEEEEcCC-CccccCCCCcEEEEEEC
Confidence 3467899999999999865 45 5899999964
No 463
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=97.41 E-value=0.00047 Score=37.24 Aligned_cols=30 Identities=20% Similarity=0.360 Sum_probs=24.4
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|....+.....+.|||.
T Consensus 8 ~~~v~~G~~vtL~C~~~~~~~~~~v~Wyrq 37 (117)
T 3bp6_A 8 WLTVSEGANATFTCSLSNWSEDLMLNWNRL 37 (117)
T ss_dssp EEEECTTCCEEEEEEESSCCTTCEEEEEEE
T ss_pred cEEEeCCCCEEEEeEeecCCCCCEEEEEEe
Confidence 467899999999999875433578999995
No 464
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=97.40 E-value=0.00044 Score=42.10 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=35.1
Q ss_pred cCCCEEEEEEc-CCC-----------ccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEEEEC
Q psy7728 5 YGPRTRLYQFA-PPS-----------SIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVWYRG 59 (65)
Q Consensus 5 ~~~~~~L~V~~-pP~-----------~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~ 59 (65)
++..+.|.|.. ++. .+.+. ..+. +.+.+|++++|.|.+.+..+ .+.+.|||.
T Consensus 114 ~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~--~~p~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 178 (280)
T 3fku_X 114 WGQGTLVTVSSGGGGSGGGGSGGGGIQPGLT--QPPS-VSKGLRQTATLTCTGNSNNVGNQGAAWLQQ 178 (280)
T ss_dssp ECCCCEEEECC--------------CCCSBB--CCSE-EEECTTCCEEEEEECCCCCCCTTCCEEEEE
T ss_pred ECCCEEEEEcCCCCccCCCCCCceEeeeEEE--eCCc-EEEecCCCEEEEEEecCCCCCCceEEEEEE
Confidence 56678898877 211 12222 2222 68899999999999976444 489999983
No 465
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=97.40 E-value=0.0002 Score=42.56 Aligned_cols=29 Identities=17% Similarity=0.467 Sum_probs=24.7
Q ss_pred EEeecCCcEEEEEEecCCC-CCceEEEEEC
Q psy7728 31 IEIRENQEITLECLVKNAK-PAAKIVWYRG 59 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~ 59 (65)
+.+.+|+.++|.|.+.+.. |.+.+.|||+
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 41 (256)
T 3ux9_B 12 VSGAPGQRVTISCSGSSSNIGSNYVSWYQQ 41 (256)
T ss_dssp EEECTTCCEEEEEECCTTTTTTSCCEEEEE
T ss_pred EEEcCCCcEEEEEecCCCCCCCceEEEEEE
Confidence 5789999999999997643 7889999995
No 466
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=97.39 E-value=9.9e-05 Score=42.76 Aligned_cols=30 Identities=13% Similarity=0.449 Sum_probs=24.7
Q ss_pred eEEeecCCcEEEEEEecCCCC-CceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKP-AAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P-~~~i~W~~~~ 60 (65)
.+.+.+|+.++|.|.+.+ .| .+.++|||++
T Consensus 9 ~~~v~~G~~v~L~C~~~~-~~~~~~v~W~~~~ 39 (231)
T 2pet_A 9 LVEVMRGKSVILDCTPTG-THDHYMLEWFLTD 39 (231)
T ss_dssp EEEEETTCCEEECCCCBS-CCSEEEEEEEEEC
T ss_pred cEEEEcCCCEEEecccCC-CCCceEEEEEEeC
Confidence 457899999999999865 46 4899999865
No 467
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=97.38 E-value=0.00028 Score=40.56 Aligned_cols=28 Identities=18% Similarity=0.434 Sum_probs=24.9
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEE
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYR 58 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~ 58 (65)
.+.+.+|+.++|.|.+. +.|.+.|.|||
T Consensus 9 ~~~v~~G~~v~L~C~~~-~~~~~~v~W~k 36 (213)
T 3mj8_L 9 LVSVALGQKATITCSGD-KLSDVYVHWYQ 36 (213)
T ss_dssp EEEEETTSCEEEEEECS-STTTSCEEEEE
T ss_pred cEEEeCCCCEEEEEEcC-CCCCceEEEEE
Confidence 35789999999999996 57999999999
No 468
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=97.38 E-value=0.0003 Score=37.65 Aligned_cols=29 Identities=21% Similarity=0.520 Sum_probs=23.7
Q ss_pred EEeecCCcEEEEEEecCCC--CCceEEEEEC
Q psy7728 31 IEIRENQEITLECLVKNAK--PAAKIVWYRG 59 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~--P~~~i~W~~~ 59 (65)
+.+.+|+.++|.|....+. +...+.|||.
T Consensus 8 ~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq 38 (116)
T 3bj9_1 8 MSSALGTTIRLTCTLRNDHDIGVYSVYWYQQ 38 (116)
T ss_dssp EEEETTCCEEEEEEECSSSCGGGCCEEEEEE
T ss_pred EEEcCCCcEEEEEEeecCccCCCceEEEEEe
Confidence 5789999999999986543 5578999985
No 469
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=97.37 E-value=5.4e-05 Score=47.92 Aligned_cols=31 Identities=23% Similarity=0.387 Sum_probs=26.3
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
.+.+.+|+.++|.|.+. + |++.|+|++++..
T Consensus 255 ~v~v~~G~~~~l~C~~~-g-p~p~i~W~~~~~~ 285 (361)
T 2xot_A 255 AWEAHLGDTLTIRCDTK-Q-QGMTKVWVSPSNE 285 (361)
T ss_dssp CCEEETTCCEEECCCCS-S-TTCEEEEECTTSC
T ss_pred CceecCCCeEEEEeEee-C-CCCeEEEEeCCCe
Confidence 35789999999999995 4 8899999997654
No 470
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=97.37 E-value=0.00024 Score=40.39 Aligned_cols=49 Identities=20% Similarity=0.369 Sum_probs=33.6
Q ss_pred EEEEEEcCCCccEEEeCCCCCeEEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 9 TRLYQFAPPSSIEIVGHPSNSKIEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 9 ~~L~V~~pP~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
..+.|..+|...... .. ....+++...+.|.+.++.|++.+.|++++..
T Consensus 114 ~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~ 162 (225)
T 4fmk_A 114 TWLRVIAQPENHAEA-QE----VTIGPQSVAVARCVSTGGRPPARITWISSLGG 162 (225)
T ss_dssp EEEEEEBCCEEEEEE-CC----BCCSSSCEEEEEEEEEEEBSCCEEEEECSSCC
T ss_pred eeeeeecCCceeecc-cc----eeecceeeeeeeeeecCCCCCCEEEEEECCcc
Confidence 345555565433222 11 24567788889998888899999999998753
No 471
>1iao_B MHC class II I-AD; MHC II, class II MHC, ovalbumin peptide; HET: NAG; 2.60A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=97.36 E-value=0.00018 Score=43.53 Aligned_cols=29 Identities=38% Similarity=0.623 Sum_probs=25.4
Q ss_pred cCCcEEEEEEecCCCCC-ceEEEEECCEEc
Q psy7728 35 ENQEITLECLVKNAKPA-AKIVWYRGNTEL 63 (65)
Q Consensus 35 ~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l 63 (65)
.|..++|.|.+.+..|+ ..|+|+|||+++
T Consensus 135 ~~~~~~L~C~v~gFyP~~I~v~W~~ng~~~ 164 (222)
T 1iao_B 135 LNHHNTLVCSVTDFYPAKIKVRWFRNGQEE 164 (222)
T ss_dssp CSSSEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CCCceEEEEEEeeeeCCCeEEEEEECCccc
Confidence 46789999999998887 589999999986
No 472
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=97.36 E-value=0.00024 Score=39.48 Aligned_cols=29 Identities=21% Similarity=0.486 Sum_probs=24.5
Q ss_pred CeEEeecCCcEEEEEEecCCCCCceEEEEE
Q psy7728 29 SKIEIRENQEITLECLVKNAKPAAKIVWYR 58 (65)
Q Consensus 29 ~~~~~~~G~~~~L~C~~~~~~P~~~i~W~~ 58 (65)
..+.+.+|+.++|.|.+.+ .|.+.|.|++
T Consensus 46 ~~~~v~~G~~v~L~C~~~~-~~~~~i~W~~ 74 (145)
T 1z9m_A 46 SDETVVAGGTVVLKCQVKD-HEDSSLQWSN 74 (145)
T ss_dssp CCEEEETTSCEEEEEECSC-CTTCCEEEEC
T ss_pred ceEEEEcCCCEEEEEEEcC-CCCcEEEEEC
Confidence 3468999999999999865 5788999994
No 473
>2qrt_A H-2KB, H-2 class I histocompatibility antigen K-B alpha chain, beta-2 microglobulin, ovalbumin-derived...; MHC-I, single chain MHC-I, glycoprotein; 1.80A {Mus musculus} PDB: 2qrs_A 2qri_A
Probab=97.35 E-value=0.0002 Score=47.18 Aligned_cols=32 Identities=16% Similarity=0.339 Sum_probs=27.6
Q ss_pred eecCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 33 IRENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 33 ~~~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
...|...+|.|.+.+..|+ ..|+|+|||++++
T Consensus 38 ~~~~~~~~L~C~v~gFyP~~I~v~W~kng~~~~ 70 (422)
T 2qrt_A 38 PENGKPNILNCYVTQFHPPHIEIQMLKNGKKIP 70 (422)
T ss_dssp CCTTSCEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred ccCCCCeEEEEEEEEEECCCCEEEEEECCEECc
Confidence 4557789999999999987 6899999999875
No 474
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=97.35 E-value=0.00015 Score=42.29 Aligned_cols=33 Identities=15% Similarity=0.245 Sum_probs=26.6
Q ss_pred CeEEeecC--CcEEEEEEecCCCCCceEEEEEC---CEEc
Q psy7728 29 SKIEIREN--QEITLECLVKNAKPAAKIVWYRG---NTEL 63 (65)
Q Consensus 29 ~~~~~~~G--~~~~L~C~~~~~~P~~~i~W~~~---~~~l 63 (65)
..+.+.+| +.++|.|.+.+ |.+.++|+|+ |+.+
T Consensus 15 ~~v~v~eG~~~~v~L~C~~~~--p~~~v~w~~~~~~g~~~ 52 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLGSI--SNLNVSLCARYPEKRFV 52 (213)
T ss_dssp EEEEECCSTTCEEEECCCBSS--TTCCEEEEEETTTEEEC
T ss_pred eEEEEecCCCccEEEeeccCC--CCcEEEEEhhcCCCccc
Confidence 35688999 99999999853 7899999984 5544
No 475
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=97.34 E-value=0.00048 Score=36.93 Aligned_cols=29 Identities=24% Similarity=0.537 Sum_probs=24.1
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|...+ .+...+.|||.
T Consensus 10 ~~~v~~G~~vtL~C~~~~-~~~~~v~W~rq 38 (112)
T 1fo0_B 10 WRLVPRGQAVNLRCILKN-SQYPWMSWYQQ 38 (112)
T ss_dssp EEECCTTCCEEEEEEESC-TTCCEEEEEEE
T ss_pred eEEEecCCcEEEEEEeCC-CCCceEEEEEE
Confidence 457899999999999864 46678999995
No 476
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=97.34 E-value=0.00068 Score=39.01 Aligned_cols=30 Identities=17% Similarity=0.344 Sum_probs=23.5
Q ss_pred EEeecCCcEEEEEEecCCCC-----CceEEEEECCE
Q psy7728 31 IEIRENQEITLECLVKNAKP-----AAKIVWYRGNT 61 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P-----~~~i~W~~~~~ 61 (65)
+.+.+|+.++|.|...+ .| ...|.|||++.
T Consensus 11 v~~~~G~~v~L~C~~~~-~p~~~~~~~~v~W~~~~~ 45 (222)
T 3sbw_C 11 YVVEYGSNMTIECKFPV-EKQLDLAALIVYWEMEDK 45 (222)
T ss_dssp EEEETTSCEEEEEECCC-CSSCCTTTCEEEEEETTE
T ss_pred EEEEcCCcEEEEeEecC-CCCCCCccEEEEEEECCc
Confidence 46789999999999854 34 34899999763
No 477
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=97.34 E-value=9.1e-05 Score=46.23 Aligned_cols=31 Identities=16% Similarity=0.391 Sum_probs=27.0
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
+.+.+|+.++|.|.+. +.|.+.|+||+++..
T Consensus 168 ~~v~~G~~v~L~C~~~-g~p~p~i~W~~~~~~ 198 (347)
T 2ifg_A 168 ASVDVGDDVLLRCQVE-GRGLEQAGWILTELE 198 (347)
T ss_dssp SCCBTTCCEEEEEEEE-CSSCCCCCEEESCCC
T ss_pred eEEeCCCcEEEEEEEe-cCCCCEEEEEcCCce
Confidence 3689999999999995 579999999999864
No 478
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=97.34 E-value=0.00011 Score=42.05 Aligned_cols=34 Identities=15% Similarity=0.291 Sum_probs=28.1
Q ss_pred eEEeecCCcEEEEEEecC---CCCCceEEEEECCEEc
Q psy7728 30 KIEIRENQEITLECLVKN---AKPAAKIVWYRGNTEL 63 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~---~~P~~~i~W~~~~~~l 63 (65)
.+.+.+|+.++|.|.+.. +.|.+.+.|++++..+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i 39 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMV 39 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEE
Confidence 357889999999999864 2477899999999875
No 479
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=97.32 E-value=0.00029 Score=37.87 Aligned_cols=29 Identities=17% Similarity=0.437 Sum_probs=23.7
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
+.+.+|++++|.|......+...+.|||.
T Consensus 11 ~~~~~G~~v~L~C~~~~~~~~~~v~W~rq 39 (115)
T 2otu_A 11 ASFSLGASAKLTCTLSSQHSTYTIEWYQQ 39 (115)
T ss_dssp EECCTTCCEEEEEEECGGGTTCCEEEEEE
T ss_pred EEECCCCCEEEEEEecCCCCCeEEEEEEe
Confidence 57899999999999855335678999994
No 480
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=97.31 E-value=0.00026 Score=43.02 Aligned_cols=31 Identities=16% Similarity=0.392 Sum_probs=24.9
Q ss_pred eEEeecCCcEEEEEEecCCC-CCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAK-PAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~~ 60 (65)
.+.+.+|+.++|.|.+.+.. +.+.|.|||++
T Consensus 35 ~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~ 66 (282)
T 1qok_A 35 AELVRSGTSVKLSCTASGFNIKDSYMHWLRQG 66 (282)
T ss_dssp CEEEETTCCEEEEEEEESSCGGGSCEEEEEEC
T ss_pred CEEEeCCCeEEEEEeccCCCCCCceEEEEEeC
Confidence 35789999999999986542 36899999963
No 481
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=97.31 E-value=0.00046 Score=39.30 Aligned_cols=30 Identities=17% Similarity=0.523 Sum_probs=24.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
.+.+.+|++++|.|...+ .+...+.|||..
T Consensus 25 ~v~v~~G~sVtL~C~~s~-~~~~~v~Wyrq~ 54 (146)
T 2yc1_B 25 TLSVSPGERATLSCRASQ-SVRSYLAWYQQK 54 (146)
T ss_dssp EEEECTTSCEEEEEEESS-CCTTCEEEEEEC
T ss_pred EEEEecCCCEEEEEEECC-CCCCEEEEEEEC
Confidence 457899999999999864 456789999953
No 482
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=97.30 E-value=0.00041 Score=37.51 Aligned_cols=31 Identities=19% Similarity=0.522 Sum_probs=24.2
Q ss_pred eEEeecCCcEEEEEEecCCC---CCceEEEEECC
Q psy7728 30 KIEIRENQEITLECLVKNAK---PAAKIVWYRGN 60 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~---P~~~i~W~~~~ 60 (65)
.+.+.+|++++|.|...... +...|.|||+.
T Consensus 16 ~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~ 49 (120)
T 3noi_A 16 EIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDE 49 (120)
T ss_dssp EEEEETTSCEEECCEECCCTTSCCCEEEEEEESS
T ss_pred EEEEEcCCCEEEEeeecCCCCCCceeEEEEEecc
Confidence 45789999999999986542 14679999975
No 483
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=97.30 E-value=0.00047 Score=40.58 Aligned_cols=28 Identities=21% Similarity=0.542 Sum_probs=24.4
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEE
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYR 58 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~ 58 (65)
.+.+.+|+.++|.|.+.+ .|.+.|.|||
T Consensus 10 ~~~v~~G~~v~L~C~~~~-~~~~~v~W~r 37 (246)
T 4dzb_B 10 WVISKSGTSVKIECRSLD-FQATTMFWYR 37 (246)
T ss_dssp EEEEETTSCEEEEEEESS-SCCCSEEEEE
T ss_pred EEEEeCCCcEEEEeEecC-CCceEEEEEE
Confidence 357899999999999865 5889999999
No 484
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=96.40 E-value=3.6e-05 Score=41.26 Aligned_cols=29 Identities=21% Similarity=0.471 Sum_probs=24.4
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECC
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGN 60 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~ 60 (65)
+.+.+|+.++|.|...+ .|.+.|.|||+.
T Consensus 9 v~v~~G~~v~L~C~~~~-~~~~~v~W~r~~ 37 (110)
T 1u3h_A 9 LTVWEGETAILNCSYEN-SAFDYFPWYQQF 37 (110)
Confidence 56889999999999864 477899999964
No 485
>4aen_A HLA class II histocompatibility antigen, DR alpha; immune system, SELF antigen, invariant chain, CLIP; 2.20A {Homo sapiens}
Probab=97.29 E-value=0.00027 Score=42.78 Aligned_cols=30 Identities=17% Similarity=0.512 Sum_probs=25.9
Q ss_pred cCCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 35 ENQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 35 ~G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
.|...+|+|.+.+..|+ ..|+|+|||+++.
T Consensus 114 ~~~~~tL~C~a~gFyP~~I~v~W~knG~~~~ 144 (207)
T 4aen_A 114 LREPNVLICFIDKFTPPVVNVTWLRNGKPVT 144 (207)
T ss_dssp TTSCEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred ccCceeEEEEEeeecCeeEEEEEEECCEECc
Confidence 36678999999999886 6899999999873
No 486
>4f7e_A CD1D antigen, D polypeptide; protein-glycolipid complex, MHC-fold, IG-fold, antigen prese TCR, membrane, immune system; HET: 0SH NAG; 2.40A {Bos taurus} PDB: 4f7c_A*
Probab=97.29 E-value=0.00023 Score=44.60 Aligned_cols=29 Identities=28% Similarity=0.602 Sum_probs=25.5
Q ss_pred CCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 36 NQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 36 G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
+..++|+|.+.+..|+ ..++|+|||+++.
T Consensus 199 ~~~~~L~C~a~gFyP~~i~v~W~~~g~~~~ 228 (283)
T 4f7e_A 199 PGRLLLVCHVSGFYPKPVRVMWMRGEQEEP 228 (283)
T ss_dssp TTEEEEEEEEEEEBSSCEEEEEEETTEECT
T ss_pred CCcEEEEEEECcEEcCceEEEEEECCcccc
Confidence 5678999999999997 5799999999875
No 487
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=97.28 E-value=0.00036 Score=38.20 Aligned_cols=30 Identities=20% Similarity=0.481 Sum_probs=23.9
Q ss_pred eEEeecCCcEEEEEEecCCCC---CceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKP---AAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P---~~~i~W~~~ 59 (65)
.+.+.+|++++|.|......+ ...+.|||.
T Consensus 10 ~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 42 (126)
T 4ffy_L 10 SLAVSLGQRATISCRASESVDHYGNSFIYWYQQ 42 (126)
T ss_dssp EEEEETTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred eEEEeCCCCEEEEEecCCCcccCCCceEEEEEE
Confidence 357899999999999865421 567999995
No 488
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=97.28 E-value=0.00033 Score=41.88 Aligned_cols=29 Identities=17% Similarity=0.551 Sum_probs=25.1
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+ .|.+.|.|||.
T Consensus 12 ~~~v~~G~~v~L~C~~~~-~~~~~v~W~r~ 40 (256)
T 3tf7_C 12 RVTVSEGASLQLRCKYSY-SATPYLFWYVQ 40 (256)
T ss_dssp EEEEETTSCEEECCEEEC-SSCCEEEEEEE
T ss_pred eEEecCCCeEEEEEEeCC-CCCceEEEEEE
Confidence 457899999999999976 49999999993
No 489
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=97.27 E-value=0.00023 Score=40.73 Aligned_cols=30 Identities=17% Similarity=0.292 Sum_probs=25.6
Q ss_pred EEeecCCcEEEEEEecCCCCCceEEEEECCEE
Q psy7728 31 IEIRENQEITLECLVKNAKPAAKIVWYRGNTE 62 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~P~~~i~W~~~~~~ 62 (65)
+.+.+|+.++|.|.+ . .|.+.|.|||++..
T Consensus 5 v~~~~G~~VtL~c~~-~-~~~~~i~W~~~~~~ 34 (171)
T 1ccz_A 5 IYGVVYGNVTFHVPS-N-VPLKEVLWKKQKDK 34 (171)
T ss_dssp EEEETTCCEEECCCC-S-SCCSCEEEEETTEE
T ss_pred EEEEcCCCEEEcCCC-C-CCcceEEEEeCCcE
Confidence 567899999999987 3 48999999999864
No 490
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=97.27 E-value=0.00024 Score=42.75 Aligned_cols=29 Identities=10% Similarity=0.304 Sum_probs=23.5
Q ss_pred EEeecCCcEEEEEEecCCC-CCceEEEEEC
Q psy7728 31 IEIRENQEITLECLVKNAK-PAAKIVWYRG 59 (65)
Q Consensus 31 ~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~ 59 (65)
+.+.+|+.++|.|.+.+.. |.+.|.|||+
T Consensus 10 ~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~ 39 (256)
T 1nqb_A 10 ELVKPGASVKLSCKASGYTFTSYWMHWVKQ 39 (256)
T ss_dssp EEECTTCCEEEEEEECSSCGGGSCEEEEEE
T ss_pred eeecCCCcEEEEEEeccccCCCceEEEEEE
Confidence 4688999999999986532 3689999994
No 491
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=97.27 E-value=0.00053 Score=40.73 Aligned_cols=30 Identities=27% Similarity=0.555 Sum_probs=24.8
Q ss_pred eEEeecCCcEEEEEEecCCC-CCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAK-PAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~-P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|...+.. +...|.|||+
T Consensus 10 ~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~ 40 (242)
T 1hxm_B 10 SSTKTLSKTARLECVVSGITISATSVYWYRE 40 (242)
T ss_dssp EEEEETTCCEEEEEEEESSCTTTSCEEEEEE
T ss_pred eEEecCCCcEEEEEEeCCccccCceEEEEEe
Confidence 45789999999999987642 6789999995
No 492
>3huj_A R3G1, T-cell surface glycoprotein CD1D; CD1D, alpha-galactosylceramide, protein complex, cell membrane, disulfide bond, endosome; HET: NDG BMA NAG AGH; 2.50A {Homo sapiens} PDB: 3vwj_A* 3vwk_A* 4en3_C* 2po6_A* 3u0p_A* 3sdx_A* 1zt4_A* 3tzv_C*
Probab=97.25 E-value=0.00033 Score=43.92 Aligned_cols=29 Identities=28% Similarity=0.531 Sum_probs=25.3
Q ss_pred CCcEEEEEEecCCCCC-ceEEEEECCEEcc
Q psy7728 36 NQEITLECLVKNAKPA-AKIVWYRGNTELK 64 (65)
Q Consensus 36 G~~~~L~C~~~~~~P~-~~i~W~~~~~~l~ 64 (65)
+..++|+|.+.+..|+ ..++|+|||+++.
T Consensus 200 ~~~~~L~C~a~gFyP~~i~v~W~~~g~~~~ 229 (284)
T 3huj_A 200 PGRLLLVCHVSGFYPKPVWVKWMRGEQEQQ 229 (284)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTEECT
T ss_pred CCceEEEEEECcEEccEEEEEEEECCEecc
Confidence 4678999999999997 5899999999874
No 493
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=97.24 E-value=0.00034 Score=42.07 Aligned_cols=30 Identities=10% Similarity=0.371 Sum_probs=24.2
Q ss_pred eEEeecCCcEEEEEEecCCCC----CceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKP----AAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P----~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+.+..+ .+.|.|||+
T Consensus 24 ~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 57 (268)
T 1x9q_A 24 SLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQ 57 (268)
T ss_dssp EECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred eEEecCCCCEEEEeEecCCcccccCCceEEEEEE
Confidence 457899999999999865432 589999985
No 494
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=97.24 E-value=0.00037 Score=40.12 Aligned_cols=27 Identities=22% Similarity=0.436 Sum_probs=23.7
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|.+. |.+.|.|||+
T Consensus 9 ~~~v~~G~~v~L~C~~~---~~~~v~W~k~ 35 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT---SNNFVSWYQQ 35 (211)
T ss_dssp EEEECTTCEEEEEEECC---CSSCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC---CCCeEEEEEE
Confidence 35789999999999985 8899999994
No 495
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=97.24 E-value=0.0006 Score=37.80 Aligned_cols=29 Identities=21% Similarity=0.371 Sum_probs=23.5
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|++++|+|...+.. ...+.|||.
T Consensus 13 ~~~v~~G~~vtL~C~~s~~~-~~~v~WyrQ 41 (128)
T 1nez_G 13 KMDAELGQKVDLVCEVLGSV-SQGCSWLFQ 41 (128)
T ss_dssp CEEECTTCCEEEEEEEESCC-SSCEEEEEE
T ss_pred eEEEcCCCCEEEEEEeCccC-CCcEEEEEe
Confidence 46789999999999986543 367999984
No 496
>3p73_A MHC RFP-Y class I alpha chain; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, immune system; HET: 16A; 1.32A {Gallus gallus} PDB: 3p77_A*
Probab=97.23 E-value=0.00031 Score=43.73 Aligned_cols=30 Identities=20% Similarity=0.420 Sum_probs=26.0
Q ss_pred cCCcEEEEEEecCCCCCc-eEEEEECCEEcc
Q psy7728 35 ENQEITLECLVKNAKPAA-KIVWYRGNTELK 64 (65)
Q Consensus 35 ~G~~~~L~C~~~~~~P~~-~i~W~~~~~~l~ 64 (65)
.+..++|.|.+.+..|+. .|+|+|||+++.
T Consensus 193 ~~~~~~L~C~~~gFyP~~i~v~W~~~g~~~~ 223 (275)
T 3p73_A 193 ADGILTLSCHAHGFYPRPITISWMKDGMVRD 223 (275)
T ss_dssp ETTEEEEEEEEEEEBSSCCEEEEEETTEECG
T ss_pred cCCCceEEEEEEEEcCCCCEEEEEECCEECC
Confidence 467789999999999986 899999999863
No 497
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=97.23 E-value=0.00032 Score=41.44 Aligned_cols=50 Identities=18% Similarity=0.335 Sum_probs=34.3
Q ss_pred cCCCEEEEEEcC-CCccEEEeCCCCCeEEeecCCcEEEEEEecCCCC-CceEEE
Q psy7728 5 YGPRTRLYQFAP-PSSIEIVGHPSNSKIEIRENQEITLECLVKNAKP-AAKIVW 56 (65)
Q Consensus 5 ~~~~~~L~V~~p-P~~~~i~~~~~~~~~~~~~G~~~~L~C~~~~~~P-~~~i~W 56 (65)
++..+.|+|... +..|.|..... ...+.+|+.++|.|.+.+..| +..++|
T Consensus 114 ~~~~t~l~V~~~~~~~P~i~~~~~--~~~~~~g~~~~l~C~~~~~~p~~~~v~W 165 (226)
T 3mlr_H 114 WGQGTMILVSSGTTKGPSVFPLAP--SSKSTSGGTAALGCLVKDYFPEPVTVSW 165 (226)
T ss_dssp ECCCEEEEECCCCCBCCEEEEEEE--EECSTTSSEEEEEEEEEEEBSSCCEEEE
T ss_pred hCCccEEeeccCCCCCCcEEEecC--cccccCCCCEEEEEEEEEEECCCeEEEE
Confidence 467788999753 34455542111 113468999999999998777 578999
No 498
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=97.22 E-value=0.00022 Score=41.16 Aligned_cols=30 Identities=13% Similarity=0.324 Sum_probs=24.8
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|......+.+.|.|||+
T Consensus 8 ~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~ 37 (180)
T 2dru_A 8 NVNAITGSNVTLTILKHPLASYQRLTWLHT 37 (180)
T ss_dssp EEEEETTSCEEECCCSSCCCSCSEEEEESS
T ss_pred eEEEEeCCCEEEeCCCCCCCceeEEEEEec
Confidence 467899999999998754445789999994
No 499
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=97.19 E-value=0.00017 Score=38.55 Aligned_cols=30 Identities=27% Similarity=0.699 Sum_probs=24.2
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|++++|.|....+.+...+.|||.
T Consensus 8 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq 37 (111)
T 2qhl_A 8 VKTVKRGENVTMECSMSKVKDKDKLAWYRQ 37 (111)
T ss_dssp EEECCTTCCEEECCBCTTCSCGGGEEEEEE
T ss_pred eEEEeCCCCEEEEEEccCCcccceEEEEEe
Confidence 457899999999999852446778999994
No 500
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=97.19 E-value=0.00087 Score=36.92 Aligned_cols=30 Identities=23% Similarity=0.507 Sum_probs=23.8
Q ss_pred eEEeecCCcEEEEEEecCCCCCceEEEEEC
Q psy7728 30 KIEIRENQEITLECLVKNAKPAAKIVWYRG 59 (65)
Q Consensus 30 ~~~~~~G~~~~L~C~~~~~~P~~~i~W~~~ 59 (65)
.+.+.+|+.++|.|...+......+.|||.
T Consensus 10 ~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq 39 (129)
T 3rrq_A 10 LLVVTEGDNATFTCSFSNTSESFVLNWYRM 39 (129)
T ss_dssp EEEEETTSCEEEEEECCCCC-CEEEEEEEE
T ss_pred EEEEeCCCCEEEEeEecCCCCCcEEEEeEe
Confidence 467899999999999865433567999984
Done!