BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy7729
         (167 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8SX83|SPEN_DROME Protein split ends OS=Drosophila melanogaster GN=spen PE=1 SV=2
          Length = 5560

 Score = 44.7 bits (104), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 42/68 (61%)

Query: 79   ENNEWEEEEKEKEEEEEEEEEEKEKDEDEEKKREKKEEEEEKQKDKKEEEVEEEEEEQKN 138
            E  E +  EKE+ E +  E+E ++KD  E++ REK++ E+E  ++K + E E  E+EQ  
Sbjct: 2004 EIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQREREHREKEQSR 2063

Query: 139  KKKEEEEE 146
            +  + E+E
Sbjct: 2064 RAMDVEQE 2071



 Score = 42.7 bits (99), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 49/68 (72%), Gaps = 3/68 (4%)

Query: 92   EEEEEEEEEKEKDEDEEKKREKKEEEEE-KQKDKKEEEVEEEEEEQK--NKKKEEEEEEE 148
            ++E++E+E +EKD  E+++RE+   E+E + KD +E+E+ E+E+ +K  +++K++ E E 
Sbjct: 1997 DKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQREREH 2056

Query: 149  KEKVEMYR 156
            +EK +  R
Sbjct: 2057 REKEQSRR 2064



 Score = 38.1 bits (87), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 48/74 (64%), Gaps = 7/74 (9%)

Query: 84   EEEEKEKEEEEEEEEEEKEKDEDEEKKREK----KEEEEEKQKDKKEEEVEEEEEEQKNK 139
            E++EKE  E++  E+E++E+D  E++ R+K    KE  E++Q++K   E+  E+++++ +
Sbjct: 1999 EQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREK---ELHREKDQRERE 2055

Query: 140  KKEEEEEEEKEKVE 153
             +E+E+      VE
Sbjct: 2056 HREKEQSRRAMDVE 2069



 Score = 34.3 bits (77), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 79   ENNEWEEEEKEKEEEEEEEEEEKEKDEDE-EKKREKKEEEEEKQKDKKEEEVEEEEEEQK 137
            E  E +  EKE  +++  E+E +EK++ E E  REK + E E ++ ++     + E+E +
Sbjct: 2014 EQRERDNREKELRDKDLREKEMREKEQREKELHREKDQREREHREKEQSRRAMDVEQEGR 2073

Query: 138  NKKKEEEEEEEKEKVEM 154
              +  E    +K K+++
Sbjct: 2074 GGRMRELSSYQKSKMDI 2090


>sp|B2ZX90|FAS1_ORYSJ Chromatin assembly factor 1 subunit FSM OS=Oryza sativa subsp.
           japonica GN=FSM PE=2 SV=1
          Length = 940

 Score = 35.8 bits (81), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 50/66 (75%)

Query: 86  EEKEKEEEEEEEEEEKEKDEDEEKKREKKEEEEEKQKDKKEEEVEEEEEEQKNKKKEEEE 145
           ++K+++EE   E++ +EK+E E KK+++K+EEE +++ K+ E+ E E  +Q+ K++EE E
Sbjct: 358 QQKKQQEEALREQKRREKEEAEMKKQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEAE 417

Query: 146 EEEKEK 151
           +E+K +
Sbjct: 418 KEQKRR 423



 Score = 30.4 bits (67), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 52/80 (65%), Gaps = 8/80 (10%)

Query: 84  EEEEKEKEEEEEEEEEEKEKDEDEEKKREKKEEEEEKQKDKKEEEVEEEEEEQKNKKKEE 143
           E+EE E ++++ ++EEE +K   E+K+REK+E E  KQ+ K++EE E+E      K++E+
Sbjct: 374 EKEEAEMKKQQRKQEEEAQK---EQKRREKEEAETRKQQKKQQEEAEKE-----QKRREK 425

Query: 144 EEEEEKEKVEMYRNPVPMYR 163
           E  + K+++ + +    M R
Sbjct: 426 EAVQLKKQLAIQKQASMMER 445


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.299    0.123    0.324 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,466,973
Number of Sequences: 539616
Number of extensions: 4384209
Number of successful extensions: 576897
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10576
Number of HSP's successfully gapped in prelim test: 2393
Number of HSP's that attempted gapping in prelim test: 88112
Number of HSP's gapped (non-prelim): 203719
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (22.0 bits)
S2: 57 (26.6 bits)