BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7731
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7TQ79|T170B_RAT Transmembrane protein 170B OS=Rattus norvegicus GN=Tmem170b PE=2
SV=2
Length = 132
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 9 IKSKPVTTATILSSIADVLS-FANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGT 67
++++ + I S+ VLS +A+ L EMW+ IFLWALFSS+FVH A ++ F
Sbjct: 1 MRAEGADHSMINLSVQQVLSLWAHGTVLRNLTEMWYWIFLWALFSSLFVHGAAGVLMFVM 60
Query: 68 LRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLS 127
L++H G+ I + +G +T +I+SA +A +Y A +MAP+ A+ WGVGQTVL+
Sbjct: 61 LQRHRQGRVLSIIAVSIGFLASVTGAMITSAAVAGIYRVAGKNMAPLEALVWGVGQTVLT 120
Query: 128 AAVGFTRILATL 139
+ F+RILATL
Sbjct: 121 LIISFSRILATL 132
>sp|P86050|T170B_MOUSE Transmembrane protein 170B OS=Mus musculus GN=Tmem170b PE=3 SV=1
Length = 132
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 9 IKSKPVTTATILSSIADVLS-FANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGT 67
++++ + I S+ VLS +A+ L EMW+ IFLWALFSS+FVH A ++ F
Sbjct: 1 MRAEGADHSMINLSVQQVLSLWAHGTVLRNLTEMWYWIFLWALFSSLFVHGAAGVLMFVM 60
Query: 68 LRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLS 127
L++H G+ I + +G +T +I+SA +A +Y A +MAP+ A+ WGVGQTVL+
Sbjct: 61 LQRHRQGRVISIIAVSIGFLASVTGAMITSAAVAGIYRVAGKNMAPLEALVWGVGQTVLT 120
Query: 128 AAVGFTRILATL 139
+ F+RILATL
Sbjct: 121 LIISFSRILATL 132
>sp|Q5T4T1|T170B_HUMAN Transmembrane protein 170B OS=Homo sapiens GN=TMEM170B PE=2 SV=1
Length = 132
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 9 IKSKPVTTATILSSIADVLS-FANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGT 67
+K++ + I S+ VLS +A+ L EMW+ IFLWALFSS+FVH A ++ F
Sbjct: 1 MKAEGGDHSMINLSVQQVLSLWAHGTVLRNLTEMWYWIFLWALFSSLFVHGAAGVLMFVM 60
Query: 68 LRKHHFGKYCPIFILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLS 127
L++H G+ + + +G +T +I+SA +A +Y A +MAP+ A+ WGVGQTVL+
Sbjct: 61 LQRHRQGRVISVIAVSIGFLASVTGAMITSAAVAGIYRVAGKNMAPLEALVWGVGQTVLT 120
Query: 128 AAVGFTRILATL 139
+ F+RILATL
Sbjct: 121 LIISFSRILATL 132
>sp|Q9D342|T170A_MOUSE Transmembrane protein 170A OS=Mus musculus GN=Tmem170a PE=2 SV=1
Length = 144
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 70/109 (64%)
Query: 31 NYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPL 90
N +L +F EMW+ +FLWAL SS+F H A ++A TLR H +G++ + IL+MG+ P+
Sbjct: 36 NSTSLCSFPEMWYGVFLWALMSSVFFHVPAGLLALFTLRHHKYGRFMSVSILLMGIVGPI 95
Query: 91 TSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
T+GI++SA IA VY A M P A+ G GQT V F R+LATL
Sbjct: 96 TAGILTSAAIAGVYRAAGKEMIPFEALTLGTGQTFCVVVVSFLRVLATL 144
>sp|Q8WVE7|T170A_HUMAN Transmembrane protein 170A OS=Homo sapiens GN=TMEM170A PE=2 SV=1
Length = 144
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 70/109 (64%)
Query: 31 NYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPL 90
N +L +F EMW+ +FLWAL SS+F H A ++A TLR H +G++ + IL+MG+ P+
Sbjct: 36 NSTSLCSFPEMWYGVFLWALVSSLFFHVPAGLLALFTLRHHKYGRFMSVSILLMGIVGPI 95
Query: 91 TSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
T+GI++SA IA VY A M P A+ G GQT V F RILATL
Sbjct: 96 TAGILTSAAIAGVYRAAGKEMIPFEALTLGTGQTFCVLVVSFLRILATL 144
>sp|Q6DF87|T170A_XENLA Transmembrane protein 170A OS=Xenopus laevis GN=tmem170a PE=2 SV=1
Length = 142
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 69/109 (63%)
Query: 31 NYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPL 90
TL +F EMW+ +FLWAL SS+F H A ++A TLR H +G++ + I +MGV P+
Sbjct: 34 QRATLCSFPEMWYGVFLWALVSSLFFHIPAGLLALFTLRHHKYGRFMSVGIFLMGVLGPI 93
Query: 91 TSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
++GI++SA IA VY A M P A+ GVGQT V F RILATL
Sbjct: 94 SAGILTSAAIAGVYKAAGKEMIPFEALVLGVGQTFCVLIVSFLRILATL 142
>sp|Q5ZM31|T170A_CHICK Transmembrane protein 170A OS=Gallus gallus GN=TMEM170A PE=2 SV=1
Length = 138
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 70/105 (66%)
Query: 35 LTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGI 94
L+TF EMW+ +FLWAL SS+ H AA++A TLR H +G++ + +L+MG+ P+T+GI
Sbjct: 34 LSTFPEMWYGVFLWALVSSLSFHVPAALLALFTLRHHKYGRFMSVSLLLMGIVGPITAGI 93
Query: 95 ISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
++SA IA VY A M P A+ + VGQT V F RILATL
Sbjct: 94 LTSAAIAGVYRAAGKKMIPFEALIFEVGQTFCVVVVSFLRILATL 138
>sp|A3KPL7|T170A_DANRE Transmembrane protein 170A OS=Danio rerio GN=tmem170a PE=2 SV=1
Length = 145
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 72/110 (65%)
Query: 30 ANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPP 89
N +L F+EMW+ +FLWA+ SS+ H AA++A TLR+H ++ P+ IL+MG+ P
Sbjct: 36 GNNTSLCDFSEMWYGVFLWAVVSSLIFHLPAALLALATLRRHKVARFFPLGILLMGIIGP 95
Query: 90 LTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILATL 139
L G+++SA IA VY A SM + A+ +GVGQ++ + F RILATL
Sbjct: 96 LFGGVLTSAAIAGVYKAAGKSMFSLEALVFGVGQSLFIFIISFLRILATL 145
>sp|B5FCA6|TRMA_VIBFM tRNA (uracil(54)-C(5))-methyltransferase OS=Vibrio fischeri (strain
MJ11) GN=trmA PE=3 SV=1
Length = 368
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 92 SGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILAT 138
+GI++ M+ C + S + ++ G G L+ A F R+LAT
Sbjct: 192 NGIVAQKMLEWAVDCTQNSQGDLLELYCGNGNFSLALAKNFDRVLAT 238
>sp|Q5E215|TRMA_VIBF1 tRNA (uracil(54)-C(5))-methyltransferase OS=Vibrio fischeri (strain
ATCC 700601 / ES114) GN=trmA PE=3 SV=1
Length = 368
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 92 SGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILAT 138
+GI++ M+ C + S + ++ G G L+ A F R+LAT
Sbjct: 192 NGIVAQKMLEWAVDCTQNSQGDLLELYCGNGNFSLALAKNFDRVLAT 238
>sp|B6ENT4|TRMA_ALISL tRNA (uracil(54)-C(5))-methyltransferase OS=Aliivibrio salmonicida
(strain LFI1238) GN=trmA PE=3 SV=1
Length = 368
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 92 SGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTRILAT 138
+G+++ M+ C + S + ++ G G L+ A F R+LAT
Sbjct: 192 NGVVAQKMLEWAVDCTQDSQGDLLELYCGNGNFSLALAKNFDRVLAT 238
>sp|P15879|ARC3_CBDP Mono-ADP-ribosyltransferase C3 OS=Clostridium botulinum D phage
GN=C3 PE=1 SV=2
Length = 251
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 80 FILIMGVFPPLTSGIISSAMIAMVYSCAEMSMAPVYAMFWGVGQ 123
+L GV P+TSG+I S YS + + + Y F + Q
Sbjct: 11 LVLSAGVIAPVTSGMIQSPQKCYAYSINQKAYSNTYQEFTNIDQ 54
>sp|Q63MM6|MACB_BURPS Macrolide export ATP-binding/permease protein MacB OS=Burkholderia
pseudomallei (strain K96243) GN=macB PE=3 SV=1
Length = 653
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 14 VTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHF 73
VT + +I VLSF + F + W +F A +S F+ +T + FG + +
Sbjct: 582 VTVCLMGGAIGIVLSFGMSFVFSLFVDQWKMVFSAASIASAFLCSTLIGVVFGFMPARNA 641
Query: 74 GKYCPI 79
+ PI
Sbjct: 642 SRLDPI 647
>sp|Q3JGG7|MACB_BURP1 Macrolide export ATP-binding/permease protein MacB OS=Burkholderia
pseudomallei (strain 1710b) GN=macB PE=3 SV=1
Length = 653
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 14 VTTATILSSIADVLSFANYCTLTTFAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHF 73
VT + +I VLSF + F + W +F A +S F+ +T + FG + +
Sbjct: 582 VTVCLMGGAIGIVLSFGMSFVFSLFVDQWKMVFSAASIASAFLCSTLIGVVFGFMPARNA 641
Query: 74 GKYCPI 79
+ PI
Sbjct: 642 SRLDPI 647
>sp|Q54GN6|TM170_DICDI Transmembrane protein 170 homolog OS=Dictyostelium discoideum
GN=tmem170 PE=3 SV=1
Length = 128
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 43/97 (44%)
Query: 38 FAEMWWQIFLWALFSSIFVHTTAAIIAFGTLRKHHFGKYCPIFILIMGVFPPLTSGIISS 97
+ ++W I W + + + +A L+K F + PIF + G+ + G IS+
Sbjct: 27 YGDIWLAITFWCTVVTTISYLISGFVASFVLKKSKFSPFIPIFTAMYGMAIGICYGGISA 86
Query: 98 AMIAMVYSCAEMSMAPVYAMFWGVGQTVLSAAVGFTR 134
+++ +Y ++ + GVG ++ FT+
Sbjct: 87 LILSAIYVSGSFLLSWYQGIICGVGLAIVHLLFAFTQ 123
>sp|Q9VJB6|CADN2_DROME Putative neural-cadherin 2 OS=Drosophila melanogaster GN=CadN2 PE=3
SV=2
Length = 2215
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
Query: 19 ILSSIADVLSFANYCTLTTFAEMWWQI-------FLWALFSSIFVHTTAAI 62
ILS V S+A + L +F ++ W + LWALF F++T ++
Sbjct: 1756 ILSQCKCVFSYAMHDNLFSFRQLVWDLKGFSISATLWALFRMAFIYTYISV 1806
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.137 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,219,919
Number of Sequences: 539616
Number of extensions: 1486333
Number of successful extensions: 4019
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3999
Number of HSP's gapped (non-prelim): 25
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)