BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy7734
         (349 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|332020766|gb|EGI61170.1| Forkhead box protein K1 [Acromyrmex echinatior]
          Length = 561

 Score =  333 bits (855), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 192/380 (50%), Positives = 222/380 (58%), Gaps = 107/380 (28%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQWK---SGTAIAKLQGREFEYMVRQKRITIGR 57
           MS +S + ESDAWALLALKS   SPSK+QW    SG  IA+L+ REFEYMVRQ+RITIGR
Sbjct: 1   MSTYSRTQESDAWALLALKSAPASPSKMQWNPESSGAPIARLEAREFEYMVRQRRITIGR 60

Query: 58  NSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
           NSS+G+VDVNMG S+FISRRH+EIF+EHP F+M CNGKNGVFVDG               
Sbjct: 61  NSSKGEVDVNMGHSNFISRRHLEIFYEHPFFYMVCNGKNGVFVDG--------------- 105

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                                       F+R   +G P ++ P      CT RFPST I+
Sbjct: 106 ---------------------------VFQR---KGAPVYQLP----KTCTFRFPSTTIK 131

Query: 178 LQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPT 237
           L FQSLV+E +          S + V   P   + LPPLRINIPD  +    SSPFPSPT
Sbjct: 132 LLFQSLVDEQE---------QSNIRVPSPPKQRAPLPPLRINIPDAGY----SSPFPSPT 178

Query: 238 GTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSL--------------- 282
           GTISAANSCP SPR    RRN+SADL M A YAA+  N   + +L               
Sbjct: 179 GTISAANSCPASPRAGQGRRNISADLQMVAAYAASVANDSQNSTLDRHSLERHDGGQSSS 238

Query: 283 ---------------------------SISQDDSKPPYSYAQLIVQAVASAHDKQLTLSG 315
                                      S  +DDSKPPYSYAQLIVQA+ASAHDKQLTLSG
Sbjct: 239 RQISPEPGADARYRGNSSGPNGTAPHYSPPKDDSKPPYSYAQLIVQAIASAHDKQLTLSG 298

Query: 316 IYSFITKNYPYYRTADKGWQ 335
           IYS+ITK+YPYYRTADKGWQ
Sbjct: 299 IYSYITKHYPYYRTADKGWQ 318



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/125 (59%), Positives = 82/125 (65%), Gaps = 16/125 (12%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF- 161
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFW+IDP SE+KLIEQAFRRRRQRGVPCFRAPF 
Sbjct: 319 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWKIDPQSENKLIEQAFRRRRQRGVPCFRAPFG 378

Query: 162 --------------GLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQ-SVSSSGVGVMGN 206
                         G+S   T    S       +S  + S P+P GQ + S S  G  G+
Sbjct: 379 TLSSRSAPASPSHVGISGLITPECLSREASPGPESYPDSSVPSPAGQLATSQSAPGSPGH 438

Query: 207 PATSS 211
           P TSS
Sbjct: 439 PYTSS 443


>gi|189240413|ref|XP_969795.2| PREDICTED: similar to forkhead box K1 [Tribolium castaneum]
 gi|270011459|gb|EFA07907.1| hypothetical protein TcasGA2_TC005482 [Tribolium castaneum]
          Length = 560

 Score =  331 bits (848), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 197/370 (53%), Positives = 226/370 (61%), Gaps = 89/370 (24%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQWK---SGTAIAKLQGREFEYMVRQKRITIGR 57
           MS  S ++ESDAW LL+LKS   SPSK+QW     G AIA+++GR+ EY+VRQ RI IGR
Sbjct: 1   MSAFSQTSESDAWTLLSLKSAPSSPSKLQWSPEHKGDAIARIEGRDIEYLVRQNRIVIGR 60

Query: 58  NSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
           NSSRGDVDVNMG SSFISRRH+E+FF+HP F++ CNGKNGVFVDG               
Sbjct: 61  NSSRGDVDVNMGHSSFISRRHLEVFFDHPFFYLLCNGKNGVFVDG--------------- 105

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                                       F+R+   G P    P      C LRFPSTNIR
Sbjct: 106 ---------------------------VFQRK---GAPAIHLP----KTCQLRFPSTNIR 131

Query: 178 LQFQSLVNE-SDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSP 236
           L FQSLV+E S+P P  + VS      M +    S + PLRINIPD   T++  SPFPSP
Sbjct: 132 LSFQSLVDENSEPPPRVREVSPV---RMRDRGGGSGMAPLRINIPDS--TDVYVSPFPSP 186

Query: 237 TGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAA---------------AH-------- 273
           TGTISAANSCP SPRG H RRNVSADL M A YAA               +H        
Sbjct: 187 TGTISAANSCPASPRGGHGRRNVSADLQMVAAYAAKVARRDEGASSHHVQSHSPDHYRHP 246

Query: 274 TN-------VVNH-MSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYP 325
           TN       V+N     S S+DDSKPPYSYAQLIVQA+ASA DKQLTLSGIYS+ITK+YP
Sbjct: 247 TNGNSIPPVVINDGYGASGSKDDSKPPYSYAQLIVQAIASAPDKQLTLSGIYSYITKHYP 306

Query: 326 YYRTADKGWQ 335
           YYRTADKGWQ
Sbjct: 307 YYRTADKGWQ 316



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/61 (96%), Positives = 59/61 (96%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFRRRRQRGVPCFRAPFG
Sbjct: 317 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSESKLIEQAFRRRRQRGVPCFRAPFG 376

Query: 163 L 163
           L
Sbjct: 377 L 377


>gi|383848334|ref|XP_003699806.1| PREDICTED: forkhead box protein K2-like [Megachile rotundata]
          Length = 556

 Score =  329 bits (843), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 196/376 (52%), Positives = 224/376 (59%), Gaps = 103/376 (27%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQWK---SGTAIAKLQGREFEYMVRQKRITIGR 57
           MS +S + ESDAWALLALKS   SP+K+QW     G  IA+L+GREFEYMVRQ+RITIGR
Sbjct: 1   MSTYSRTQESDAWALLALKSAPASPTKMQWNPEAKGAPIARLEGREFEYMVRQRRITIGR 60

Query: 58  NSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
           NSSRG+VDVNMG SSFISRRH+EIF++HP FFM CNGKNGVFVDG               
Sbjct: 61  NSSRGEVDVNMGHSSFISRRHLEIFYDHPFFFMICNGKNGVFVDG--------------- 105

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                                       F+R   +G P F+ P      CT RFPSTNIR
Sbjct: 106 ---------------------------VFQR---KGAPAFQLP----KTCTFRFPSTNIR 131

Query: 178 LQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPT 237
           L FQSLV+E +          + V +   P   + LPPLRINIPD  +    SSPFPSPT
Sbjct: 132 LVFQSLVDEQE---------QNNVRLPSPPKHRAPLPPLRINIPDTGY----SSPFPSPT 178

Query: 238 GTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAA------HTNVVNH------------ 279
           GTISAANSCP SPR    RRN+SADL M A YAAA      ++N+  H            
Sbjct: 179 GTISAANSCPASPRAGQGRRNISADLQMVAVYAAAVANDPQNSNMERHDGGQSSSRQISP 238

Query: 280 --------------------MSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSF 319
                                + S  +DDSKPPYSYAQLIVQA+ASA DKQLTLSGIYS+
Sbjct: 239 ELGVESRYRGGSSSGPNGTTANCSPPKDDSKPPYSYAQLIVQAIASATDKQLTLSGIYSY 298

Query: 320 ITKNYPYYRTADKGWQ 335
           ITKNYPYYRTADKGWQ
Sbjct: 299 ITKNYPYYRTADKGWQ 314



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/119 (61%), Positives = 77/119 (64%), Gaps = 14/119 (11%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFRRRRQRGVPCFRAPFG
Sbjct: 315 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSEAKLIEQAFRRRRQRGVPCFRAPFG 374

Query: 163 L--------------SSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNP 207
           L              S   T    S       +S  + S P+P GQ  S S  G  G+P
Sbjct: 375 LSSRSAPASPSHVGISGLMTPECLSRETSPGPESYPDSSVPSPAGQLTSQSAPGSPGHP 433


>gi|328793785|ref|XP_623740.3| PREDICTED: forkhead box protein K2-like [Apis mellifera]
          Length = 556

 Score =  328 bits (842), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 194/375 (51%), Positives = 222/375 (59%), Gaps = 103/375 (27%)

Query: 2   SVHSGSNESDAWALLALKSTSPSPSKIQWK---SGTAIAKLQGREFEYMVRQKRITIGRN 58
           + +S + ESDAWALLALKS   SP+K+QW     G  IA+L+GREFEYMVRQ+RITIGRN
Sbjct: 3   TTYSRTQESDAWALLALKSAPASPTKMQWNPEAKGAPIARLEGREFEYMVRQRRITIGRN 62

Query: 59  SSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKV 118
           SS+G+VDVNMG SSFISRRH+EIF++HP FFMTCNGKNGVFVDG                
Sbjct: 63  SSKGEVDVNMGHSSFISRRHLEIFYDHPFFFMTCNGKNGVFVDG---------------- 106

Query: 119 PRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRL 178
                                      F+R   +G P F+ P      CT RFPSTNIRL
Sbjct: 107 --------------------------VFQR---KGAPAFQLP----KTCTFRFPSTNIRL 133

Query: 179 QFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTG 238
            FQSLV+E +          S + V   P   + LPPLRINIPD  +    SSPFPSPTG
Sbjct: 134 VFQSLVDEQE---------QSNIPVSSPPKHRAPLPPLRINIPDTGY----SSPFPSPTG 180

Query: 239 TISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSL---------------- 282
           TISAANSCP SPR    RRN+SADL M A YAAA  N   + ++                
Sbjct: 181 TISAANSCPASPRAGQGRRNISADLQMVAVYAAAVANDPQNSNMERHDGGQSSNRQISPE 240

Query: 283 ----------------------SISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFI 320
                                 S  +DDSKPPYSYAQLIVQA+ASA DKQLTLSGIYS+I
Sbjct: 241 LGVESRYRSGSSSGPNGTTAHCSPPKDDSKPPYSYAQLIVQAIASAADKQLTLSGIYSYI 300

Query: 321 TKNYPYYRTADKGWQ 335
           TKNYPYYRTADKGWQ
Sbjct: 301 TKNYPYYRTADKGWQ 315



 Score =  130 bits (327), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/127 (58%), Positives = 78/127 (61%), Gaps = 22/127 (17%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFRRRRQRGVPCFRAPFG
Sbjct: 316 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSEAKLIEQAFRRRRQRGVPCFRAPFG 375

Query: 163 L------------------SSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVM 204
           L                  +  C  R  S        S V+    +P GQ  S S  G  
Sbjct: 376 LSSRSAPASPSHVGISGLMTPECLSREASPGPESYPDSTVS----SPAGQLTSQSAPGSP 431

Query: 205 GNPATSS 211
           G+P  SS
Sbjct: 432 GHPYASS 438


>gi|340725157|ref|XP_003400940.1| PREDICTED: forkhead box protein K2-like [Bombus terrestris]
 gi|350417002|ref|XP_003491209.1| PREDICTED: forkhead box protein K2-like [Bombus impatiens]
          Length = 540

 Score =  328 bits (842), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 191/358 (53%), Positives = 219/358 (61%), Gaps = 86/358 (24%)

Query: 2   SVHSGSNESDAWALLALKSTSPSPSKIQWK---SGTAIAKLQGREFEYMVRQKRITIGRN 58
           + +S + ESDAWALLALKS   SP+K+QW     G  IA+L+GREFEYMVRQ  ITIGRN
Sbjct: 3   TTYSRTQESDAWALLALKSAPASPTKMQWNPEAKGAPIARLEGREFEYMVRQHSITIGRN 62

Query: 59  SSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKV 118
           SS+G+VDVNMG SSFISRRH+EI+++HP FFM CNGKNGVFVDG                
Sbjct: 63  SSKGEVDVNMGHSSFISRRHLEIYYDHPYFFMVCNGKNGVFVDG---------------- 106

Query: 119 PRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRL 178
                                      F+R+         A F L   CTLRFPSTNIRL
Sbjct: 107 --------------------------IFQRKSA-------AEFRLPKTCTLRFPSTNIRL 133

Query: 179 QFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTG 238
            FQSLV+E +          S V V   P   + LPPLRINIPD  +    SSPFPSPTG
Sbjct: 134 VFQSLVDEQE---------ESNVCVRSPPKHRAPLPPLRINIPDAGY----SSPFPSPTG 180

Query: 239 TISAANSCPTSPRGLHNRRNVSADLHMAAHYA------AAHTNVVNH------------- 279
           TISAANSCP SPR    RRN+SADL M A YA      + ++N+  H             
Sbjct: 181 TISAANSCPASPRAGQGRRNISADLQMVAVYAAAVANDSQNSNMERHEGGQSSNRQISPG 240

Query: 280 --MSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
              + S  +DDSKPPYSYAQLIVQA+ASA DKQLTLSGIYS+ITKNYPYYRTADKGWQ
Sbjct: 241 TTANCSPPKDDSKPPYSYAQLIVQAIASAADKQLTLSGIYSYITKNYPYYRTADKGWQ 298



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/123 (58%), Positives = 79/123 (64%), Gaps = 14/123 (11%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RRQRGVPCFRAPFG
Sbjct: 299 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSEAKLIEQAFRQRRQRGVPCFRAPFG 358

Query: 163 L--------------SSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPA 208
           L              S   T    S  +    +S  + +  +P GQ  S S  G  G+P 
Sbjct: 359 LSSRSAPASPSHVGISGLMTPECLSREVSPGPESYPDSTVSSPAGQLTSQSAPGSPGHPY 418

Query: 209 TSS 211
            SS
Sbjct: 419 ASS 421


>gi|307191174|gb|EFN74871.1| Forkhead box protein K2 [Camponotus floridanus]
          Length = 562

 Score =  327 bits (838), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 194/381 (50%), Positives = 220/381 (57%), Gaps = 108/381 (28%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQWK---SGTAIAKLQGREFEYMVRQKRITIGR 57
           MS +S + ESDAWALLALKS   SP+K+QW     G  IA+L+GREFEYMVRQ+RITIGR
Sbjct: 1   MSTYSRTQESDAWALLALKSAPASPTKMQWNPESKGAPIARLEGREFEYMVRQRRITIGR 60

Query: 58  NSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
           NSS+G+VDVNMG SSFISRRH+EI++EHP F+M CNGKNGVFVDG               
Sbjct: 61  NSSKGEVDVNMGHSSFISRRHLEIYYEHPFFYMVCNGKNGVFVDG--------------- 105

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                                       F+R+          PF L   CT RFPST IR
Sbjct: 106 ---------------------------VFQRKSA-------PPFQLPKTCTFRFPSTTIR 131

Query: 178 LQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPT 237
           L FQSL++E +          S + V   P   + LPPLRINIPD  +    SSPFPSPT
Sbjct: 132 LIFQSLIDEQE---------QSNIRVPSPPKQRAPLPPLRINIPDAGY----SSPFPSPT 178

Query: 238 GTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSL--------------- 282
           GTISAANSCP SPRG   RRNVSADL M A YAAA  N   + +L               
Sbjct: 179 GTISAANSCPASPRGGQGRRNVSADLQMVAVYAAAVANDPQNSTLDRHNLERHEGGQSSS 238

Query: 283 ----------------------------SISQDDSKPPYSYAQLIVQAVASAHDKQLTLS 314
                                       S  +DDSKPPYSYAQLIVQA+ASA DKQLTLS
Sbjct: 239 RQISPEPGAEARYRSGNSSGPNGTAPHYSPPKDDSKPPYSYAQLIVQAIASALDKQLTLS 298

Query: 315 GIYSFITKNYPYYRTADKGWQ 335
           GIYS+ITKNYPYYRTADKGWQ
Sbjct: 299 GIYSYITKNYPYYRTADKGWQ 319



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 81/125 (64%), Gaps = 16/125 (12%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF- 161
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFW+IDP SE KLI+QAFRRRRQRGVPCFRAPF 
Sbjct: 320 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWKIDPQSEAKLIDQAFRRRRQRGVPCFRAPFG 379

Query: 162 --------------GLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQ-SVSSSGVGVMGN 206
                         G+S   T    S       +S  + S P+P GQ + S S  G  G+
Sbjct: 380 TLSSRSAPASPSHVGISGLMTPECLSREASPGPESYPDSSVPSPAGQLATSQSAPGSPGH 439

Query: 207 PATSS 211
           P TSS
Sbjct: 440 PYTSS 444


>gi|307205445|gb|EFN83777.1| Forkhead box protein K2 [Harpegnathos saltator]
          Length = 553

 Score =  324 bits (830), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 187/371 (50%), Positives = 217/371 (58%), Gaps = 98/371 (26%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQWK---SGTAIAKLQGREFEYMVRQKRITIGR 57
           MS +S + ESDAWALLALKS   SP+K+QW     G  IA+L+GREFEYMVRQ+RITIGR
Sbjct: 1   MSTYSRTQESDAWALLALKSAPASPTKMQWNPESKGAPIARLEGREFEYMVRQRRITIGR 60

Query: 58  NSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
           NSS+G+VDVNMG SSFISRRH+EI++EHP+F+M CNGKNGVF                  
Sbjct: 61  NSSKGEVDVNMGHSSFISRRHLEIYYEHPSFYMVCNGKNGVF------------------ 102

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                                   I+  F+R+         +PF L   CT RFPST IR
Sbjct: 103 ------------------------IDGVFQRKGA-------SPFQLPKTCTFRFPSTTIR 131

Query: 178 LQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPT 237
           L FQSL++E +          S V V   P     LPPLRINIPD  +    SSPFPSPT
Sbjct: 132 LVFQSLLDEQE---------QSNVRVPSPPKQRVPLPPLRINIPDTGY----SSPFPSPT 178

Query: 238 GTISAANSCPTSPRGLHNRRNVSADLHM---AAHYAAAHTNVVNHMS------------- 281
           GTISAANSCP SPR    RRN+SADL M   A  Y   ++++  H               
Sbjct: 179 GTISAANSCPASPRAGQGRRNISADLQMVAAAVAYDPQNSSLERHDGGQSSSRQLSPEPE 238

Query: 282 -----------------LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
                             S  +DDSKPPYSYAQLIVQA+ASA DKQLTLSGIYS+ITKNY
Sbjct: 239 TRFRGGNGSGPNGTAPHYSPPKDDSKPPYSYAQLIVQAIASAPDKQLTLSGIYSYITKNY 298

Query: 325 PYYRTADKGWQ 335
           PYYRTADKGWQ
Sbjct: 299 PYYRTADKGWQ 309



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/124 (62%), Positives = 85/124 (68%), Gaps = 15/124 (12%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFRRRRQRGVPCFRAPFG
Sbjct: 310 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSEAKLIEQAFRRRRQRGVPCFRAPFG 369

Query: 163 LSSRCT-----------LRFPSTNIRLQF---QSLVNESDPAPTGQ-SVSSSGVGVMGNP 207
           LSSR             L  P +  R      +S  + S P+P GQ + S S  G  G+P
Sbjct: 370 LSSRSAPASPSHVGISGLMTPESLSREASPGPESYPDSSVPSPAGQLTTSQSAPGSPGHP 429

Query: 208 ATSS 211
            TS+
Sbjct: 430 YTST 433


>gi|242013698|ref|XP_002427539.1| Forkhead box protein N3, putative [Pediculus humanus corporis]
 gi|212511941|gb|EEB14801.1| Forkhead box protein N3, putative [Pediculus humanus corporis]
          Length = 563

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 186/385 (48%), Positives = 228/385 (59%), Gaps = 109/385 (28%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQWK---SGTAIAKLQGREFEYMVRQKRITIGR 57
           MSV S + ESDAWALLALKS   SPSK++W    + TAIA+++GR+FEY++RQKRITIGR
Sbjct: 1   MSV-SRTQESDAWALLALKSAPASPSKVRWSPDSNDTAIARIEGRDFEYIMRQKRITIGR 59

Query: 58  NSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
           NSSRG V+VNMG SSFISR H+E+ F++PNF+++C GKNG+FVDG            F  
Sbjct: 60  NSSRGQVEVNMGHSSFISRNHLELCFDYPNFYLSCKGKNGIFVDG-----------VF-- 106

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                   GKG              E A+R               L+ R T+RFPSTNI 
Sbjct: 107 -------QGKG--------------ESAYR---------------LNKRSTIRFPSTNIW 130

Query: 178 LQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPT 237
           + FQSLV+E DP      +S      + +P   + LPPLRINIPD   +E  +SPFPSPT
Sbjct: 131 VIFQSLVDEQDPTVNISKIS------LQSPVKRTPLPPLRINIPD---SEQVNSPFPSPT 181

Query: 238 GTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTN------VVNHMSLSIS------ 285
           GTISAANSCP SPR  H RRN+++DL M A YAA   N      V N +++S        
Sbjct: 182 GTISAANSCPASPRSGHGRRNITSDLQMVAAYAAQVANNGGPITVSNTVTISSDDRETYG 241

Query: 286 -----------------------------------QDDSKPPYSYAQLIVQAVASAHDKQ 310
                                              +DD+KPP+SYAQLIVQA+ASAH+ Q
Sbjct: 242 ESSHGGIHSPEPMDNNHKSYRGGSNGAGPSDYSSGKDDTKPPFSYAQLIVQAIASAHETQ 301

Query: 311 LTLSGIYSFITKNYPYYRTADKGWQ 335
           LTLSGIYS+ITKNYPYYRTADKGWQ
Sbjct: 302 LTLSGIYSYITKNYPYYRTADKGWQ 326



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/63 (93%), Positives = 59/63 (93%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFRRRRQRGVPCFR PFG
Sbjct: 327 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSESKLIEQAFRRRRQRGVPCFRTPFG 386

Query: 163 LSS 165
            SS
Sbjct: 387 PSS 389


>gi|427783313|gb|JAA57108.1| Putative forkhead transcription factor k strongylocentrotus
           purpuratus [Rhipicephalus pulchellus]
          Length = 665

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 181/368 (49%), Positives = 215/368 (58%), Gaps = 84/368 (22%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQW---KSGTAIAKLQGREFEYMVRQKRITIGR 57
           MS H  ++++DAWALLALKS   SPS++QW   +SG AIAKL+GREFEY++RQKRI+IGR
Sbjct: 1   MSTHHRASDNDAWALLALKSAPSSPSRLQWNPERSGAAIAKLEGREFEYLIRQKRISIGR 60

Query: 58  NSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
           NSSRG+VDVNMG SSFISR+H+EIF+E  +FFM CNGKNGVFVDG               
Sbjct: 61  NSSRGEVDVNMGHSSFISRQHLEIFYECAHFFMVCNGKNGVFVDG--------------- 105

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                                       F+R+         AP  L   C  RFPSTNI+
Sbjct: 106 ---------------------------VFQRKGA-------APMPLPKTCVFRFPSTNIK 131

Query: 178 LQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPP---------------LRINIPD 222
           + FQSLV+E  P   G +         G  ATS   PP               L+INIP+
Sbjct: 132 IMFQSLVDEVGPVSGGGAAPPPPRLEAGPLATSPRQPPPPQLAPHHLPRPLAPLKINIPE 191

Query: 223 HPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVV----- 277
            P +  +S P PSPTGT+SAANSCP SPR   +RRN+++DL MAA     H  V      
Sbjct: 192 -PESSFTS-PIPSPTGTLSAANSCPASPRSGSHRRNITSDLQMAAAAVERHEEVPTTGSS 249

Query: 278 ----------NHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYY 327
                     N    S    D KPPYSYAQLIVQA++SA DKQLTLSGIYS+ITKNYPYY
Sbjct: 250 SSGPASHNSNNSGPGSGPDGDQKPPYSYAQLIVQAISSAQDKQLTLSGIYSYITKNYPYY 309

Query: 328 RTADKGWQ 335
           RTADKGWQ
Sbjct: 310 RTADKGWQ 317



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 53/59 (89%), Positives = 56/59 (94%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF 161
           NSIRHNLSLNRYF+KVPRSQEEPGKGSFWRIDP SE KL+EQAFRRRRQRG+PCFR PF
Sbjct: 318 NSIRHNLSLNRYFVKVPRSQEEPGKGSFWRIDPQSEVKLVEQAFRRRRQRGLPCFRTPF 376


>gi|427783311|gb|JAA57107.1| Putative forkhead transcription factor k strongylocentrotus
           purpuratus [Rhipicephalus pulchellus]
          Length = 665

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 181/368 (49%), Positives = 215/368 (58%), Gaps = 84/368 (22%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQW---KSGTAIAKLQGREFEYMVRQKRITIGR 57
           MS H  ++++DAWALLALKS   SPS++QW   +SG AIAKL+GREFEY++RQKRI+IGR
Sbjct: 1   MSTHHRASDNDAWALLALKSAPSSPSRLQWNPERSGAAIAKLEGREFEYLIRQKRISIGR 60

Query: 58  NSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
           NSSRG+VDVNMG SSFISR+H+EIF+E  +FFM CNGKNGVFVDG               
Sbjct: 61  NSSRGEVDVNMGHSSFISRQHLEIFYECAHFFMVCNGKNGVFVDG--------------- 105

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                                       F+R+         AP  L   C  RFPSTNI+
Sbjct: 106 ---------------------------VFQRKGA-------APMPLPKTCVFRFPSTNIK 131

Query: 178 LQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPP---------------LRINIPD 222
           + FQSLV+E  P   G +         G  ATS   PP               L+INIP+
Sbjct: 132 IMFQSLVDEVGPVSGGGAAPPPPRLEAGPLATSPRQPPPPQLAPHHLPRPLAPLKINIPE 191

Query: 223 HPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVV----- 277
            P +  +S P PSPTGT+SAANSCP SPR   +RRN+++DL MAA     H  V      
Sbjct: 192 -PESSFTS-PIPSPTGTLSAANSCPASPRSGSHRRNITSDLQMAAAAVERHEEVPTTGSS 249

Query: 278 ----------NHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYY 327
                     N    S    D KPPYSYAQLIVQA++SA DKQLTLSGIYS+ITKNYPYY
Sbjct: 250 SSGPASHNSNNSGPGSGPDGDQKPPYSYAQLIVQAISSAQDKQLTLSGIYSYITKNYPYY 309

Query: 328 RTADKGWQ 335
           RTADKGWQ
Sbjct: 310 RTADKGWQ 317



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 53/59 (89%), Positives = 56/59 (94%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF 161
           NSIRHNLSLNRYF+KVPRSQEEPGKGSFWRIDP SE KL+EQAFRRRRQRG+PCFR PF
Sbjct: 318 NSIRHNLSLNRYFVKVPRSQEEPGKGSFWRIDPQSEVKLVEQAFRRRRQRGLPCFRTPF 376


>gi|427779635|gb|JAA55269.1| Putative forkhead transcription factor k strongylocentrotus
           purpuratus [Rhipicephalus pulchellus]
          Length = 535

 Score =  310 bits (794), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 181/368 (49%), Positives = 215/368 (58%), Gaps = 84/368 (22%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQW---KSGTAIAKLQGREFEYMVRQKRITIGR 57
           MS H  ++++DAWALLALKS   SPS++QW   +SG AIAKL+GREFEY++RQKRI+IGR
Sbjct: 1   MSTHHRASDNDAWALLALKSAPSSPSRLQWNPERSGAAIAKLEGREFEYLIRQKRISIGR 60

Query: 58  NSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
           NSSRG+VDVNMG SSFISR+H+EIF+E  +FFM CNGKNGVFVDG               
Sbjct: 61  NSSRGEVDVNMGHSSFISRQHLEIFYECAHFFMVCNGKNGVFVDG--------------- 105

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                                       F+R+         AP  L   C  RFPSTNI+
Sbjct: 106 ---------------------------VFQRKGA-------APMPLPKTCVFRFPSTNIK 131

Query: 178 LQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPP---------------LRINIPD 222
           + FQSLV+E  P   G +         G  ATS   PP               L+INIP+
Sbjct: 132 IMFQSLVDEVGPVSGGGAAPPPPRLEAGPLATSPRQPPPPQLAPHHLPRPLAPLKINIPE 191

Query: 223 HPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVV----- 277
            P +  +S P PSPTGT+SAANSCP SPR   +RRN+++DL MAA     H  V      
Sbjct: 192 -PESSFTS-PIPSPTGTLSAANSCPASPRSGSHRRNITSDLQMAAAAVERHEEVPTTGSS 249

Query: 278 ----------NHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYY 327
                     N    S    D KPPYSYAQLIVQA++SA DKQLTLSGIYS+ITKNYPYY
Sbjct: 250 SSGPASHNSNNSGPGSGPDGDQKPPYSYAQLIVQAISSAQDKQLTLSGIYSYITKNYPYY 309

Query: 328 RTADKGWQ 335
           RTADKGWQ
Sbjct: 310 RTADKGWQ 317



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/59 (89%), Positives = 56/59 (94%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF 161
           NSIRHNLSLNRYF+KVPRSQEEPGKGSFWRIDP SE KL+EQAFRRRRQRG+PCFR PF
Sbjct: 318 NSIRHNLSLNRYFVKVPRSQEEPGKGSFWRIDPQSEVKLVEQAFRRRRQRGLPCFRTPF 376


>gi|357603694|gb|EHJ63883.1| putative forkhead box K1 [Danaus plexippus]
          Length = 608

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 176/356 (49%), Positives = 205/356 (57%), Gaps = 92/356 (25%)

Query: 5   SGSNESDAWALLALKSTSPSPSKIQWK---SGTAIAKLQGREFEYMVRQKRITIGRNSSR 61
           S S+ESDAW LL+LKS  PSPSK+QW    + TAIA+L GR+FEYM+RQK++ IGRNSSR
Sbjct: 7   SRSSESDAWTLLSLKSAPPSPSKVQWAQEPAPTAIARLDGRDFEYMIRQKKVIIGRNSSR 66

Query: 62  GDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRS 121
           G VDVNMG SSFISRRH+E+F++HP F++TCN KNGV VDG                   
Sbjct: 67  GQVDVNMGHSSFISRRHLELFYDHPEFYLTCNSKNGVLVDG------------------- 107

Query: 122 QEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQ 181
                                   F+R+         A   L  RCTLRFPSTNIRL+FQ
Sbjct: 108 -----------------------VFQRKGA-------AAMLLPKRCTLRFPSTNIRLEFQ 137

Query: 182 SLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTIS 241
           SLV ES            G G  G P     LPPLRI+IP         SP PSPTGTIS
Sbjct: 138 SLVEES----------GVGSGGAGPP-----LPPLRISIPV---DNDGRSPAPSPTGTIS 179

Query: 242 AANSCPTSPRGLHNRRNVSADLHMAAHYAA----------------------AHTNVVNH 279
           A NSCPTSPRG  +      DL + A YAA                      +  +  + 
Sbjct: 180 ATNSCPTSPRGAGSSGRRHPDLGLVAQYAALADHQRPNSNGTAASSTSDSGYSSRDARDA 239

Query: 280 MSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
                 +D++KPPYSYAQLIVQAVASA DKQLTLSGIYS+ITK+YPYYRTADKGWQ
Sbjct: 240 REHREGRDEAKPPYSYAQLIVQAVASAADKQLTLSGIYSYITKHYPYYRTADKGWQ 295



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/71 (83%), Positives = 59/71 (83%), Gaps = 1/71 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIE AFR RR RGV  FRAPFG
Sbjct: 296 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSEGKLIELAFRPRRPRGV-QFRAPFG 354

Query: 163 LSSRCTLRFPS 173
           LSSR     PS
Sbjct: 355 LSSRSAPTSPS 365


>gi|322802708|gb|EFZ22925.1| hypothetical protein SINV_00202 [Solenopsis invicta]
          Length = 535

 Score =  293 bits (749), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 176/354 (49%), Positives = 201/354 (56%), Gaps = 108/354 (30%)

Query: 28  IQWK---SGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFE 84
           +QW    +G  IA+L+ REFEYMVRQ+RITIGRNSS+G+VDVNMG SSFISRRH+EIF+E
Sbjct: 1   MQWNPESNGAPIARLEAREFEYMVRQRRITIGRNSSKGEVDVNMGHSSFISRRHLEIFYE 60

Query: 85  HPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQ 144
           HP FFM CNGKNGVFVDG                                          
Sbjct: 61  HPFFFMVCNGKNGVFVDG------------------------------------------ 78

Query: 145 AFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVM 204
            F+R   +G P F+ P      CT RFPST I+L FQSLV+E +          S + V 
Sbjct: 79  VFQR---KGAPVFQLP----KTCTFRFPSTTIKLLFQSLVDEQE---------QSNIRVP 122

Query: 205 GNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLH 264
             P   + LPPLRINIPD  +    SSPFPSPTGTISAANSCP SPR    RRN+SADL 
Sbjct: 123 SPPKQRAPLPPLRINIPDAGY----SSPFPSPTGTISAANSCPASPRAGQGRRNISADLQ 178

Query: 265 MAAHYAAAHTNVVNHMSL------------------------------------------ 282
           M A YAAA  N   + +L                                          
Sbjct: 179 MVAAYAAAVANDSQNSALDRHSLERHDSGQSSSRQISPEPGADARYRGGNSSGPNGTTPH 238

Query: 283 -SISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            S  +DDSKPPYSYAQLIVQA+ASAHDKQLTLSGIYS+ITK+YPYYRTADKGWQ
Sbjct: 239 YSPPKDDSKPPYSYAQLIVQAIASAHDKQLTLSGIYSYITKHYPYYRTADKGWQ 292



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/125 (59%), Positives = 81/125 (64%), Gaps = 16/125 (12%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF- 161
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFW+IDP SE KLIEQAFRRRRQRGVPCFRAPF 
Sbjct: 293 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWKIDPQSETKLIEQAFRRRRQRGVPCFRAPFG 352

Query: 162 --------------GLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQ-SVSSSGVGVMGN 206
                         G+S   T    S       +S  + S P+P GQ + S S  G  G+
Sbjct: 353 TLSSRSAPASPSHVGISGLITPECLSREASPGPESYPDSSVPSPAGQLATSQSAPGSPGH 412

Query: 207 PATSS 211
           P TSS
Sbjct: 413 PYTSS 417


>gi|241117504|ref|XP_002401930.1| forkhead domain-containing protein, putative [Ixodes scapularis]
 gi|215493244|gb|EEC02885.1| forkhead domain-containing protein, putative [Ixodes scapularis]
          Length = 566

 Score =  287 bits (735), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 169/361 (46%), Positives = 205/361 (56%), Gaps = 77/361 (21%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQWK---SGTAIAKLQGREFEYMVRQKRITIGR 57
           MS H  ++++DAWALLALKS   SPSK+QW     G AIA+L+GREFEYM+RQ RI+IGR
Sbjct: 1   MSAHQRASDNDAWALLALKSAPSSPSKLQWNPEPKGVAIARLEGREFEYMIRQNRISIGR 60

Query: 58  NSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
           NSSRG+VDVNMG SSFISR+H+EIF+E+ +FFM CNGKNGVFVDG               
Sbjct: 61  NSSRGEVDVNMGHSSFISRKHLEIFYEYSHFFMVCNGKNGVFVDG--------------- 105

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                                       F+R+         AP  L   C  RFPSTNI+
Sbjct: 106 ---------------------------VFQRKGA-------APLPLPKTCVFRFPSTNIK 131

Query: 178 LQFQSLVNESDPAPTGQSVSSSGV--GVMGNPATSSLLPP-LRINIPDHPHTEISSSPFP 234
           + FQSLV+E+ P   G       +  G +G  +   L  P LR  +P  PH     +P  
Sbjct: 132 IMFQSLVDEAGPPGLGGGPPPPRLEAGSLGAASPLGLASPRLRPQVP--PHLPRPLAPLK 189

Query: 235 SPTGTISAANSCPTSPR-GLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSIS-------- 285
                  AANSCP SPR G H+RRN+++DL MAA     H      M  ++         
Sbjct: 190 INIPEPDAANSCPASPRAGSHHRRNIASDLQMAAEAVERHEEAGPGMGHALGGGAPGAPP 249

Query: 286 -----------QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGW 334
                      + D KPPYSYAQLIVQA++SA DKQLTLSGIYS+ITKNYPYYRTADKGW
Sbjct: 250 HSNSQGTVGGPEGDQKPPYSYAQLIVQAISSAQDKQLTLSGIYSYITKNYPYYRTADKGW 309

Query: 335 Q 335
           Q
Sbjct: 310 Q 310



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 47/51 (92%), Positives = 49/51 (96%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           NSIRHNLSLNRYF+KVPRSQEEPGKGSFWRIDP SE KL+EQAFRRRRQRG
Sbjct: 311 NSIRHNLSLNRYFVKVPRSQEEPGKGSFWRIDPQSEGKLVEQAFRRRRQRG 361


>gi|405967051|gb|EKC32265.1| Forkhead box protein K1 [Crassostrea gigas]
          Length = 636

 Score =  285 bits (728), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 166/354 (46%), Positives = 213/354 (60%), Gaps = 78/354 (22%)

Query: 1   MSVHSGSNESDAWALLALKSTSP--SPSKIQWK---SGTAIAKLQGREFEYMVRQKRITI 55
           MS     +++DA ALLALK+ S   SP++ +W     G AIA+L+GR+FEY++RQ RI++
Sbjct: 1   MSALQQPSDNDALALLALKNQSAPTSPARKRWNPEPKGIAIARLEGRDFEYLMRQSRISV 60

Query: 56  GRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYF 115
           GRNSS+GDVDVNMG SSFISR H+EI ++ PNFF+ C GKNG+F+DG             
Sbjct: 61  GRNSSKGDVDVNMGHSSFISRVHLEIMYDEPNFFLKCGGKNGIFIDG------------- 107

Query: 116 IKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTN 175
                                         F+R+   G P    P  L   CTLRFPST 
Sbjct: 108 -----------------------------VFQRK---GAP----PLQLPRTCTLRFPSTA 131

Query: 176 IRLQFQSLVNESDPA----PTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSS 231
           I++ FQSLV ++ PA    P  Q         M  P    + PPL+I+IP+       S 
Sbjct: 132 IKIAFQSLVEDTTPATAFPPPLQ---------METPPKKKISPPLKISIPERVERSFDS- 181

Query: 232 PFPSPTGTISAANSCPTSPRG-LHNRRNVSADLHMAAHYAAAH----TNVVNHMSLSIS- 285
           P PSPTGTISAANSCPTSPRG   +R  +  ++ +AA  AAA+    + V+   +  ++ 
Sbjct: 182 PCPSPTGTISAANSCPTSPRGGTSHRPTLLPNIQIAALNAAANPREESPVMTPQNADMNS 241

Query: 286 ----QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
               +DDSKPP+SYAQLIVQA+ SAHDKQLTLSGIY++ITKNYPYYRTADKGWQ
Sbjct: 242 GDSPKDDSKPPFSYAQLIVQAITSAHDKQLTLSGIYTYITKNYPYYRTADKGWQ 295



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/108 (64%), Positives = 76/108 (70%), Gaps = 3/108 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF- 161
           NSIRHNLSLNRYF+KVPRSQ+EPGKGSFWRIDP SE KL  QAFR+RRQRGVPCFR PF 
Sbjct: 296 NSIRHNLSLNRYFVKVPRSQDEPGKGSFWRIDPASEAKLTAQAFRKRRQRGVPCFRTPFG 355

Query: 162 GLSSRCTLRFPS-TNIRLQFQSLVNESDPAPTG-QSVSSSGVGVMGNP 207
           GLS+R     PS T       SL  ES P P G +    S  GVM +P
Sbjct: 356 GLSTRSAPASPSHTAGTFTPDSLSRESSPIPEGFEGDIHSQPGVMTHP 403


>gi|190576677|gb|ACE79146.1| winged helix/forkhead transcription factor FoxK [Branchiostoma
           floridae]
          Length = 615

 Score =  283 bits (724), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 170/338 (50%), Positives = 207/338 (61%), Gaps = 67/338 (19%)

Query: 8   NESDAWALLALKSTSPSPSKIQWKS----GTAIAKLQGREFEYMVRQKRITIGRNSSRGD 63
           +++DAWALLALKS   SP+++ W      GTAIA+++GREFEY++RQ RIT+GRNSS+G 
Sbjct: 8   SDNDAWALLALKSAPASPARVAWNPEEPRGTAIARIEGREFEYLMRQGRITVGRNSSQGA 67

Query: 64  VDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQE 123
           VDVNMG SSFISR+HIEIF+E PNFFM+C GKNGVFVDG                     
Sbjct: 68  VDVNMGHSSFISRKHIEIFYEPPNFFMSCLGKNGVFVDG--------------------- 106

Query: 124 EPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSL 183
                                 F+RR         +P  L  +C  RFPSTNI++ FQS+
Sbjct: 107 ---------------------VFQRRGA-------SPLQLPKQCVFRFPSTNIKIVFQSM 138

Query: 184 VNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAA 243
           V+E +              +   P     L PL+INIPD P+T+  S PFPSPTGTISAA
Sbjct: 139 VDEVN------PQPPPPPPLPSPPKKKPELAPLKINIPD-PNTDFGS-PFPSPTGTISAA 190

Query: 244 NSCPTSPRGLHN--RRNVSADLHMAAHYAAAHTNVVNHMSLS----ISQDDSKPPYSYAQ 297
           NS P+SPR   +  + +V+  L  AA YAAA        S S      QD+SKPPYSYAQ
Sbjct: 191 NSAPSSPRSRTSTHKASVAQALQRAAEYAAAAMEEKEGQSTSEESGAQQDNSKPPYSYAQ 250

Query: 298 LIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           LIVQA+ SA+DKQLTLSGIY+ ITKNYPYYRTADKGWQ
Sbjct: 251 LIVQAITSANDKQLTLSGIYAHITKNYPYYRTADKGWQ 288



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/257 (38%), Positives = 123/257 (47%), Gaps = 42/257 (16%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF- 161
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP  E KL EQA+RRRRQRGVPCFR PF 
Sbjct: 289 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPSCEAKLTEQAWRRRRQRGVPCFRTPFG 348

Query: 162 -GLSSRCTLRFP---------STNIRLQFQSLVNESDPAPTGQS---------------- 195
            GLSSR     P         +T+      SL  E  P P   +                
Sbjct: 349 GGLSSRSAPSSPTHHAPPHYLTTSGTFTPDSLSREGSPIPEDVTTAPVTTAMPDQLKQVV 408

Query: 196 VSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSS---PFPSPTGTISAANSCPTSPRG 252
           ++  G  +    +T++   P  I    HP T I+ +     PS    +SAA S   +   
Sbjct: 409 MTQDGSVIAQAVSTATGAGPGVIQPISHPTTVITQASQHALPSAAQLVSAAQSVLAA--- 465

Query: 253 LHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASA-HDKQL 311
               +  +  LH A+         ++HM   ISQ  S   Y+   +   A  SA  D+  
Sbjct: 466 ----QGTATALHPASTLTTVPV-AMHHMPTVISQPKS---YTATSISTSANGSAVQDRAG 517

Query: 312 TLSGIYSFITKNYPYYR 328
           + +G+       YP YR
Sbjct: 518 STNGVPDNEEGRYPNYR 534


>gi|390346581|ref|XP_793339.3| PREDICTED: forkhead box protein K2 [Strongylocentrotus purpuratus]
          Length = 682

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 164/346 (47%), Positives = 207/346 (59%), Gaps = 69/346 (19%)

Query: 7   SNESDAWALLALKSTSPSPSKIQW----KSGTAIAKLQGREFEYMVRQKRITIGRNSSRG 62
           +   DAWALLALKS   SP+++ W    + G  +A+L+GREFEY++R+ RIT+GRNS +G
Sbjct: 11  TENDDAWALLALKSAPASPTRVPWNDGGQKGVILARLEGREFEYLIRKNRITVGRNSKQG 70

Query: 63  DVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQ 122
           +VDVNMG SSFISR+H+EI  E PNFF+ C GKNG+FVDG                    
Sbjct: 71  EVDVNMGHSSFISRKHLEIICESPNFFLNCTGKNGIFVDG-------------------- 110

Query: 123 EEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQS 182
                                  F+RR         AP  L   C LRFPST+I++ FQ+
Sbjct: 111 ----------------------IFQRRGA-------APLQLPRTCILRFPSTSIKIMFQA 141

Query: 183 LVNESDP---APTGQSVSSSGVGVMGNPAT---SSLLPPLRINIPDHPHTEISSSPFPSP 236
           L++ES P    P  Q   ++ V V   P+     +++PPL+I+IP  P     +SP+PSP
Sbjct: 142 LISESAPPAPVPPMQLQPTAPV-VTKEPSPVKRKTMMPPLKIDIP--PSDATYASPYPSP 198

Query: 237 TGTISAANSCPTSPR-GLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSIS------QDDS 289
           TGTISA NSCPTSPR G   R  ++ DL  AA  AAA     +    S S      +D++
Sbjct: 199 TGTISAVNSCPTSPRAGTSQRSMLAPDLSAAAFAAAAAAAADDKEGHSSSNDVGGPRDET 258

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYAQLIVQA+ SA DKQLTLSGIYS+ITK YPYYRTADKGWQ
Sbjct: 259 KPPYSYAQLIVQAIMSAQDKQLTLSGIYSYITKTYPYYRTADKGWQ 304



 Score =  124 bits (310), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 53/59 (89%), Positives = 57/59 (96%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF 161
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWR+DPGSE KL++QA+RRRRQRGVPCFR PF
Sbjct: 305 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRLDPGSEAKLMDQAYRRRRQRGVPCFRTPF 363


>gi|321454577|gb|EFX65742.1| hypothetical protein DAPPUDRAFT_332896 [Daphnia pulex]
          Length = 545

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 167/342 (48%), Positives = 197/342 (57%), Gaps = 76/342 (22%)

Query: 9   ESDAWALLALKSTSPSPSKIQWKSG------TAIAKLQGREFEYMVRQKRITIGRNSSRG 62
           ES+A+ALL+LK+   SP+   W  G        IA+++GREFE++VRQKR+ IGRNSSRG
Sbjct: 19  ESEAYALLSLKTAPTSPAH-HWNHGGEARGPVVIARIEGREFEFLVRQKRLVIGRNSSRG 77

Query: 63  DVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQ 122
            VDVNMG SSFISRRH+E++FEHP F+M CNGKNGVFVD                     
Sbjct: 78  QVDVNMGHSSFISRRHLEVYFEHPFFYMICNGKNGVFVD--------------------- 116

Query: 123 EEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQS 182
                G F R                   +G     AP  L   C  RFPSTNIRL FQS
Sbjct: 117 -----GVFQR-------------------KGA----APLQLPKMCVFRFPSTNIRLMFQS 148

Query: 183 LVNESDPAPTGQSVSSSGVGVMGNPATSSL----LPPLRINIPDHPHTEISSSPFPSPTG 238
           LV+ES     G   + +    +   A S+     L PLRINIP       +SSP PSPTG
Sbjct: 149 LVDES-----GPPPNLAPPSPLKRRAPSTQQQPHLAPLRINIPIGEEEAEASSPLPSPTG 203

Query: 239 TISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSI-----SQDDSKPPY 293
           TISAANSCP SPR        S  L  A +   +  ++    S        S+DDSKPPY
Sbjct: 204 TISAANSCPVSPR------EGSHGLGPAGYSTGSGQDLTQDHSPGAEGGNDSKDDSKPPY 257

Query: 294 SYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SYAQLIVQA+ +A DKQLTLSGIYS+ITKNYPYYRTADKGWQ
Sbjct: 258 SYAQLIVQAICTAPDKQLTLSGIYSYITKNYPYYRTADKGWQ 299



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/63 (85%), Positives = 58/63 (92%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYF+KVPRSQEEPGKGSFWRIDP SE KL+EQAFRRRRQRGVPCFR P+ 
Sbjct: 300 NSIRHNLSLNRYFLKVPRSQEEPGKGSFWRIDPTSESKLVEQAFRRRRQRGVPCFRTPYA 359

Query: 163 LSS 165
            S+
Sbjct: 360 RSA 362


>gi|291244297|ref|XP_002742034.1| PREDICTED: fork-head box K transcription factor [Saccoglossus
           kowalevskii]
          Length = 602

 Score =  270 bits (690), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 173/343 (50%), Positives = 212/343 (61%), Gaps = 68/343 (19%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQWKS----GTAIAKLQGREFEYMVRQKRITIG 56
           MSV     ++DA ALLALKS   SPS+I W      G AIA+L+GREFEY++RQ RI+IG
Sbjct: 1   MSVLKQPTDNDALALLALKSAPSSPSRIPWADVTDRGLAIARLEGREFEYLMRQNRISIG 60

Query: 57  RNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFI 116
           RNSS+G+VDVNMG SSFISR+H+EI FE PNFF+ C+GKNG+FVDG              
Sbjct: 61  RNSSQGEVDVNMGHSSFISRKHLEISFESPNFFLHCSGKNGIFVDG-------------- 106

Query: 117 KVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNI 176
                                        F+RR          P  L   C LRFPSTNI
Sbjct: 107 ----------------------------IFQRRGAN-------PLQLPRACVLRFPSTNI 131

Query: 177 RLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSP 236
           ++ FQ+L++E + AP    + S        P     +  LRINIPD  + +  +S FPSP
Sbjct: 132 KIMFQALIDEHN-APQNSGIPS--------PPKKKQMTELRINIPDS-NADFGNS-FPSP 180

Query: 237 TGTISAANSCPTSPRG-LHNRRNVSADLHMAAHYAAAHT--NVVNHMSLSIS-QDDSKPP 292
           TGTISAANSCP+SPRG   +RRNV+++L  AA+ AAA    +  +H S + S +DDSKPP
Sbjct: 181 TGTISAANSCPSSPRGGTGHRRNVASELQAAAYAAAAVAAEDKESHSSSNESPKDDSKPP 240

Query: 293 YSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           YSYAQLIVQA+ SA DKQLTLSGIY  I KNYPYYR+ADKGWQ
Sbjct: 241 YSYAQLIVQAIISAQDKQLTLSGIYCHIMKNYPYYRSADKGWQ 283



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 71/99 (71%), Gaps = 8/99 (8%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCF-RAPF 161
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWR+DP SE KL EQAFRRRRQRGVPCF R PF
Sbjct: 284 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRLDPASEAKLTEQAFRRRRQRGVPCFSRTPF 343

Query: 162 -GLSSRCTLRFPSTNIRLQF------QSLVNESDPAPTG 193
            G+SSR     P+ + +          +L  E  P P+G
Sbjct: 344 GGISSRSAPASPTHSSQYHHMGTFTPDNLSREGSPVPSG 382


>gi|260819483|ref|XP_002605066.1| hypothetical protein BRAFLDRAFT_124138 [Branchiostoma floridae]
 gi|229290396|gb|EEN61076.1| hypothetical protein BRAFLDRAFT_124138 [Branchiostoma floridae]
          Length = 440

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 169/377 (44%), Positives = 213/377 (56%), Gaps = 82/377 (21%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQWK----SGTAIAKLQGREFEYMVRQKRITIG 56
           MS     +++DAWALLALKS   SP+++ W      GTAIA+++GREFEY++RQ RIT+G
Sbjct: 1   MSGLKQPSDNDAWALLALKSAPASPARVAWNPEEPRGTAIARIEGREFEYLMRQGRITVG 60

Query: 57  RNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFI 116
           RNSS+G VDVNMG SSFISR+HIEIF+E PNFFM+C GKNGVFVDG   R   S     +
Sbjct: 61  RNSSQGAVDVNMGHSSFISRKHIEIFYEPPNFFMSCLGKNGVFVDGVFQRRGASP----L 116

Query: 117 KVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNI 176
           ++P+  +                            R +P       +  RC  RFPSTNI
Sbjct: 117 QLPKQCD---------------------------VRDIPVLTCTLPV-RRCVFRFPSTNI 148

Query: 177 RLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSP 236
           ++ FQS+V+E +              +   P     L PL+INIPD P+T+   SPFPSP
Sbjct: 149 KIVFQSMVDEVN------PQPPPPPPLPSPPKKKPELAPLKINIPD-PNTDF-GSPFPSP 200

Query: 237 TGTISAANSCPTSPRGLHNR---------------RNVSAD-----------LHMAAHYA 270
           TGTISA NS P+SP+G H                 R+ +A+            H A+   
Sbjct: 201 TGTISAMNSAPSSPQGGHCSWTAPHASGPPQGGPTRDCAANSAPSSPRSRTSTHKASVAQ 260

Query: 271 AAHTNVVNHMSL------------SISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYS 318
           A         +             S +QD+SKPPYSYAQLIVQA+ SA+DKQLTLSGIY+
Sbjct: 261 ALQRAAEYAAAAMEEKEGQSTSEESGAQDNSKPPYSYAQLIVQAITSANDKQLTLSGIYA 320

Query: 319 FITKNYPYYRTADKGWQ 335
            ITKNYPYYRTADKGWQ
Sbjct: 321 HITKNYPYYRTADKGWQ 337



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/100 (65%), Positives = 73/100 (73%), Gaps = 8/100 (8%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF- 161
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP  E KL EQA+RRRRQRGVPCFR PF 
Sbjct: 338 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPSCEAKLTEQAWRRRRQRGVPCFRTPFG 397

Query: 162 -GLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSG 200
            GLSSR      S  + L F++L  +    P+ +  S +G
Sbjct: 398 GGLSSR------SDTVSLVFKTLRVKKLECPSSEHPSEAG 431


>gi|82706204|gb|ABB89486.1| forkhead transcription factor K [Strongylocentrotus purpuratus]
          Length = 606

 Score =  268 bits (685), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 160/347 (46%), Positives = 203/347 (58%), Gaps = 69/347 (19%)

Query: 6   GSNESDAWALLALKSTSPSPSKIQW----KSGTAIAKLQGREFEYMVRQKRITIGRNSSR 61
            +   DAWALLALKS   SP+++ W    + G  +A+L+GREFEY++R+ RIT+GRNS +
Sbjct: 7   ATENDDAWALLALKSAPASPTRVPWNDGGQKGVILARLEGREFEYLIRKNRITVGRNSKQ 66

Query: 62  GDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRS 121
           G+VDVNMG SSFISR+H+EI  E PNFF+ C GKNG+FVDG                   
Sbjct: 67  GEVDVNMGHSSFISRKHLEIICESPNFFLNCTGKNGIFVDG------------------- 107

Query: 122 QEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQ 181
                                   F+RR         AP  L   C LRFPST+I++ FQ
Sbjct: 108 -----------------------IFQRRGA-------APLQLPRTCILRFPSTSIKIMFQ 137

Query: 182 SLVNESDP---APTGQSVSSSGVGVMGNPAT---SSLLPPLRINIPDHPHTEISSSPFPS 235
           +L++ES P    P  Q   ++ V V   P+     +++PPL+ +IP  P     +SP+PS
Sbjct: 138 ALISESAPPAPVPPMQLQPAAPV-VAKEPSPVKRKTMMPPLKXDIP--PSDATYASPYPS 194

Query: 236 PTGTISAANSCPTSPR-GLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSIS------QDD 288
           PTGT SA NSCPTSPR G   R  ++ DL  AA  AAA     +    S S      +D+
Sbjct: 195 PTGTXSAVNSCPTSPRAGTSQRSMLAPDLSAAAFAAAAAAAADDKEGHSSSNDVGGPRDE 254

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPP SYAQLIVQA+ SA  KQLTLSGIYS+ITK YPYYRTADKGWQ
Sbjct: 255 TKPPXSYAQLIVQAIMSAQXKQLTLSGIYSYITKTYPYYRTADKGWQ 301



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/59 (89%), Positives = 57/59 (96%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF 161
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWR+DPGSE KL++QA+RRRRQRGVPCFR PF
Sbjct: 302 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRLDPGSEAKLMDQAYRRRRQRGVPCFRTPF 360


>gi|443726389|gb|ELU13569.1| hypothetical protein CAPTEDRAFT_23732, partial [Capitella teleta]
          Length = 389

 Score =  264 bits (675), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 166/350 (47%), Positives = 202/350 (57%), Gaps = 76/350 (21%)

Query: 7   SNESDAWALLALKSTSPSPSKIQ-WK---SGTAIAKLQGREFEYMVRQKRITIGRNSSRG 62
           S+ +DAWALLALKS   SPS+ + W       AIA+L+GR+FE+++R+ RI+IGRNSSRG
Sbjct: 1   SSSNDAWALLALKSAPASPSRRRTWSPEPKQRAIARLEGRDFEFLMRRPRISIGRNSSRG 60

Query: 63  DVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQ 122
           DVDVNMG SSFISR H+EIF E   FFMTCNGKNGVFVDG                    
Sbjct: 61  DVDVNMGHSSFISRVHLEIFCEDSRFFMTCNGKNGVFVDG-------------------- 100

Query: 123 EEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQS 182
                                  F+R+         AP  L   C LRFPSTNI++ FQ 
Sbjct: 101 ----------------------IFQRKGA-------APMELPKTCVLRFPSTNIKIVFQR 131

Query: 183 LVNESDPAPTGQSVSSSGVGVMGNPA--TSSLLPPLRINIPDHPHTEISSSPFPSPTGTI 240
           + + S   P    V  + V     PA      +PPLRINIP+    + SS P PSPTGTI
Sbjct: 132 IEDGSKEEP----VLPADVQQQPIPAQRIKPPMPPLRINIPEAKDGKFSS-PCPSPTGTI 186

Query: 241 SAANSCPTSPRG-LHNRRNVSADL--------------HMAAHYAAAHTNVVNHMSLSIS 285
           SAANSCPTSPRG   +R ++  DL               M          +V+  S+S  
Sbjct: 187 SAANSCPTSPRGGTSHRPSLMPDLPSAAYAASVARAKNEMKEPAQPPPMAIVDPPSMS-P 245

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +DDSKPPYSYAQLIVQA+ SA D+QLTLSGIY++ITK+YPYY +ADKGWQ
Sbjct: 246 RDDSKPPYSYAQLIVQAITSAPDRQLTLSGIYAYITKHYPYYHSADKGWQ 295



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/72 (83%), Positives = 62/72 (86%), Gaps = 1/72 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF- 161
           NSIRHNLSLNRYF+KVPRSQEEPGKGSFWRIDP SE KL EQAFRRRRQRGVPCFR PF 
Sbjct: 296 NSIRHNLSLNRYFVKVPRSQEEPGKGSFWRIDPASEAKLTEQAFRRRRQRGVPCFRTPFG 355

Query: 162 GLSSRCTLRFPS 173
           GLS+R     PS
Sbjct: 356 GLSTRSAPASPS 367


>gi|41054015|ref|NP_956196.1| forkhead box protein K1 [Danio rerio]
 gi|32451944|gb|AAH54664.1| Forkhead box K1 [Danio rerio]
          Length = 639

 Score =  246 bits (629), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 155/365 (42%), Positives = 197/365 (53%), Gaps = 104/365 (28%)

Query: 8   NESDAWALLALKSTSPSPSKIQ------WKSGT---------------AIAKLQGREFEY 46
           +++ A ALLALKS   SP  +         S T               A+A+L+GR+FE+
Sbjct: 6   DDTGARALLALKSAPCSPVAVSIPPVYTLSSSTSPGITSSMPLSSPSQALARLEGRDFEF 65

Query: 47  MVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIR 106
           ++RQ+ +T+GRNSS G VDVNMG SSFISRRH++I FE P+F++ C GKNGVFVDG    
Sbjct: 66  VMRQRTVTVGRNSSHGSVDVNMGHSSFISRRHLQIAFEEPHFYLRCLGKNGVFVDG---- 121

Query: 107 HNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSR 166
                                                  F+RR   G P    P  L   
Sbjct: 122 --------------------------------------VFQRR---GAP----PLALPRE 136

Query: 167 CTLRFPSTNIRLQFQSLVN---ESDPAPTGQSVSSSGVGVMGNPATSSLLP---PLRINI 220
           CT RFPST I++QF SL +   + + AP                    L P   PL+I I
Sbjct: 137 CTFRFPSTVIKIQFTSLYHKETQKEEAPVS--------------PVRPLYPQISPLKITI 182

Query: 221 PDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTN 275
           PD+    + S P PSPTGTIS  NSCP SPRG  +      RN+++DL +AA YAA    
Sbjct: 183 PDNDFKTMMS-PLPSPTGTISVPNSCPASPRGAGSSGYRYGRNITSDLQLAAEYAA---K 238

Query: 276 VVNHMSLSIS-----QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTA 330
            V+      +     +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTA
Sbjct: 239 AVSEQRTEATGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTA 298

Query: 331 DKGWQ 335
           DKGWQ
Sbjct: 299 DKGWQ 303



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWR+DP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 304 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRVDPSSEAKLVEQAFRKRRQRGVSCFRTPFG 363

Query: 163 -LSSR 166
            LSSR
Sbjct: 364 PLSSR 368


>gi|149034993|gb|EDL89713.1| rCG42803 [Rattus norvegicus]
          Length = 563

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/341 (45%), Positives = 198/341 (58%), Gaps = 86/341 (25%)

Query: 8   NESDAWALLALKSTSPSPSKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVN 67
            +S A ALLAL+S   SPS      G A+A+L+GREFE+++RQ  +TIGRNSS+G VD+N
Sbjct: 6   EDSGARALLALRSAPCSPSP-----GPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLN 60

Query: 68  MGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGK 127
           MGLSSFISRRH+++ F+ P+F++ C GKNGVFVDG                         
Sbjct: 61  MGLSSFISRRHLQLSFQEPHFYLRCLGKNGVFVDG------------------------- 95

Query: 128 GSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNES 187
                            AF+RR   G P  + P     +CT RFPST I++QF SL ++ 
Sbjct: 96  -----------------AFQRR---GAPALQLP----QQCTFRFPSTAIKIQFTSLYHKE 131

Query: 188 DPAPTGQSVSSSGVGVMGNPATSSLLP------PLRINIPDHPHTEISSSPFPSPTGTIS 241
           + AP                  S L P      PL+I+IP+ P      SP PSPTGTIS
Sbjct: 132 E-APA-----------------SPLRPLYPQISPLKIHIPE-PDLRSLVSPIPSPTGTIS 172

Query: 242 AANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYS 294
             NSCP SPRG  +      +NV++DL +AA +AA   +    +       +D+SKPPYS
Sbjct: 173 VPNSCPASPRGAGSSSYRFVQNVTSDLQLAAEFAAKAASEQQADTSGGDSPKDESKPPYS 232

Query: 295 YAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           YAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 233 YAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ 273



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 274 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 333

Query: 163 -LSSR 166
            LSSR
Sbjct: 334 PLSSR 338


>gi|359079935|ref|XP_003587905.1| PREDICTED: forkhead box protein K1 [Bos taurus]
          Length = 768

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/323 (44%), Positives = 189/323 (58%), Gaps = 81/323 (25%)

Query: 26  SKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEH 85
           + + W  G A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ 
Sbjct: 139 ASVHWSPGPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQE 198

Query: 86  PNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQA 145
           P+F++ C GKNGVFVDG                                          A
Sbjct: 199 PHFYLRCLGKNGVFVDG------------------------------------------A 216

Query: 146 FRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMG 205
           F+RR   G P  + P     +CTLRFPST I++QF SL ++ + AP              
Sbjct: 217 FQRR---GAPALQLP----KQCTLRFPSTAIKIQFTSLYHQEE-APA------------- 255

Query: 206 NPATSSLLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL-----H 254
               S L P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG       
Sbjct: 256 ----SPLRPLYPQISPLKIHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSSYR 310

Query: 255 NRRNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLT 312
           + +NV++DL +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLT
Sbjct: 311 SVQNVTSDLQLAAEFAARAASEQQADTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLT 370

Query: 313 LSGIYSFITKNYPYYRTADKGWQ 335
           LSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 371 LSGIYAHITKHYPYYRTADKGWQ 393



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 394 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 453

Query: 163 -LSSR 166
            LSSR
Sbjct: 454 PLSSR 458


>gi|296473044|tpg|DAA15159.1| TPA: hypothetical protein LOC512522 [Bos taurus]
          Length = 1861

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 144/323 (44%), Positives = 189/323 (58%), Gaps = 81/323 (25%)

Query: 26  SKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEH 85
           + + W  G A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ 
Sbjct: 139 ASVHWSPGPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQE 198

Query: 86  PNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQA 145
           P+F++ C GKNGVFVDG                                          A
Sbjct: 199 PHFYLRCLGKNGVFVDG------------------------------------------A 216

Query: 146 FRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMG 205
           F+RR   G P  + P     +CTLRFPST I++QF SL ++ + AP              
Sbjct: 217 FQRR---GAPALQLP----KQCTLRFPSTAIKIQFTSLYHQEE-APA------------- 255

Query: 206 NPATSSLLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRG-----LH 254
               S L P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG       
Sbjct: 256 ----SPLRPLYPQISPLKIHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSSYR 310

Query: 255 NRRNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLT 312
           + +NV++DL +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLT
Sbjct: 311 SVQNVTSDLQLAAEFAARAASEQQADTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLT 370

Query: 313 LSGIYSFITKNYPYYRTADKGWQ 335
           LSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 371 LSGIYAHITKHYPYYRTADKGWQ 393



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 394 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 453

Query: 163 -LSSR 166
            LSSR
Sbjct: 454 PLSSR 458


>gi|167900441|ref|NP_001032296.2| forkhead box K1 [Rattus norvegicus]
          Length = 719

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 187/321 (58%), Gaps = 81/321 (25%)

Query: 28  IQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN 87
           ++   G A+A+L+GREFE+++RQ  +TIGRNSS+G VD+NMGLSSFISRRH+++ F+ P+
Sbjct: 84  VRQSPGPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLNMGLSSFISRRHLQLSFQEPH 143

Query: 88  FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           F++ C GKNGVFVDG                                          AF+
Sbjct: 144 FYLRCLGKNGVFVDG------------------------------------------AFQ 161

Query: 148 RRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNP 207
           RR   G P  + P     +CT RFPST I++QF SL ++ + AP                
Sbjct: 162 RR---GAPALQLP----QQCTFRFPSTAIKIQFTSLYHKEE-APA--------------- 198

Query: 208 ATSSLLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR----- 256
             S L P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      
Sbjct: 199 --SPLRPLYPQISPLKIHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSSYRFV 255

Query: 257 RNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLS 314
           +NV++DL +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLS
Sbjct: 256 QNVTSDLQLAAEFAAKAASEQQADTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLS 315

Query: 315 GIYSFITKNYPYYRTADKGWQ 335
           GIY+ ITK+YPYYRTADKGWQ
Sbjct: 316 GIYAHITKHYPYYRTADKGWQ 336



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 337 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 396

Query: 163 -LSSR 166
            LSSR
Sbjct: 397 PLSSR 401


>gi|358419037|ref|XP_003584106.1| PREDICTED: forkhead box protein K1 [Bos taurus]
          Length = 768

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/323 (44%), Positives = 189/323 (58%), Gaps = 81/323 (25%)

Query: 26  SKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEH 85
           + ++   G A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ 
Sbjct: 139 ASVRRSPGPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQE 198

Query: 86  PNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQA 145
           P+F++ C GKNGVFVDG                                          A
Sbjct: 199 PHFYLRCLGKNGVFVDG------------------------------------------A 216

Query: 146 FRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMG 205
           F+RR   G P  + P     +CTLRFPST I++QF SL ++ + AP              
Sbjct: 217 FQRR---GAPALQLP----KQCTLRFPSTAIKIQFTSLYHQEE-APA------------- 255

Query: 206 NPATSSLLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL-----H 254
               S L P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG       
Sbjct: 256 ----SPLRPLYPQISPLKIHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSSYR 310

Query: 255 NRRNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLT 312
           + +NV++DL +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLT
Sbjct: 311 SVQNVTSDLQLAAEFAARAASEQQADTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLT 370

Query: 313 LSGIYSFITKNYPYYRTADKGWQ 335
           LSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 371 LSGIYAHITKHYPYYRTADKGWQ 393



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 394 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 453

Query: 163 -LSSR 166
            LSSR
Sbjct: 454 PLSSR 458


>gi|417412094|gb|JAA52460.1| Putative forkhead/hnf-3-related transcription factor, partial
           [Desmodus rotundus]
          Length = 643

 Score =  237 bits (605), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 186/321 (57%), Gaps = 81/321 (25%)

Query: 28  IQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN 87
           ++   G A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+
Sbjct: 4   VRRSPGPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLTFQEPH 63

Query: 88  FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           FF+ C GKNGVFVDG                                          AF+
Sbjct: 64  FFLRCLGKNGVFVDG------------------------------------------AFQ 81

Query: 148 RRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNP 207
           RR   G P  + P     +CT RFPST I++QF +L  + + AP                
Sbjct: 82  RR---GAPALQLP----KQCTFRFPSTAIKIQFTALFQQEE-APA--------------- 118

Query: 208 ATSSLLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR----- 256
             S L P      PLRI+IP+ P      SP PSPTGTIS  NSCP SPRG  +      
Sbjct: 119 --SPLRPLYPQISPLRIHIPE-PDLRGLVSPVPSPTGTISVPNSCPASPRGAGSSGYRFV 175

Query: 257 RNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLS 314
           +NV++DL +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLS
Sbjct: 176 QNVTSDLQLAAEFAAKAASEQQADASGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLS 235

Query: 315 GIYSFITKNYPYYRTADKGWQ 335
           GIY+ ITK+YPYYRTADKGWQ
Sbjct: 236 GIYAHITKHYPYYRTADKGWQ 256



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 257 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 316

Query: 163 -LSSR 166
            LSSR
Sbjct: 317 PLSSR 321


>gi|348537066|ref|XP_003456016.1| PREDICTED: forkhead box protein K1-like [Oreochromis niloticus]
          Length = 672

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 146/343 (42%), Positives = 184/343 (53%), Gaps = 94/343 (27%)

Query: 25  PSKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFF- 83
           P ++      A+A+L+GR+FEY++RQ+ +TIGRNSS G VD+NMG SSFISRRH+++ + 
Sbjct: 56  PVRLASTPPQALARLEGRDFEYVMRQRTVTIGRNSSHGSVDINMGHSSFISRRHLQLTYD 115

Query: 84  EHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIE 143
           E   F + C GKNGVFVDG                                         
Sbjct: 116 EASGFSLRCLGKNGVFVDG----------------------------------------- 134

Query: 144 QAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGV 203
             F+RR   G P    P  L   C  RFPST I++QF SL+   +     Q         
Sbjct: 135 -VFQRR---GAP----PLPLPRECMFRFPSTAIKIQFMSLLEVEEHREREQQ-------- 178

Query: 204 MGNPATSSLLP---PLRINIPD----HPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR 256
             +P   SLLP   PL+I+IP       H     SP PSPTGTIS  NSCP SPRG  + 
Sbjct: 179 --SPPARSLLPQISPLKISIPTAQQHEEHMRAFGSPLPSPTGTISVPNSCPASPRGAGSS 236

Query: 257 -----RNVSADLHMAAHYAAAHTNVVNHMSLSISQ-------------------DDSKPP 292
                RN+++DL +AA YAA     V+    SI++                   D+SKPP
Sbjct: 237 GYRYGRNITSDLQLAAEYAA---KAVSEQRRSIAEQRSGGSEQRAESAGGDSPRDESKPP 293

Query: 293 YSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           YSYAQLIVQA++SA DKQLTLSGIY++ITK+YPYYRTADKGWQ
Sbjct: 294 YSYAQLIVQAISSAQDKQLTLSGIYAYITKHYPYYRTADKGWQ 336



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/65 (81%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYF+KV RSQ+EPGKGSFWR+D  SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 337 NSIRHNLSLNRYFLKVARSQDEPGKGSFWRLDSASEAKLVEQAFRKRRQRGVACFRTPFG 396

Query: 163 -LSSR 166
            LSSR
Sbjct: 397 PLSSR 401


>gi|402862800|ref|XP_003895730.1| PREDICTED: forkhead box protein K1, partial [Papio anubis]
          Length = 665

 Score =  237 bits (604), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 187/321 (58%), Gaps = 81/321 (25%)

Query: 28  IQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN 87
           ++   G A+A+L+GREFE+++RQ  +TIGRNSS+G VD+NMGLSSFISRRH+++ F+ P+
Sbjct: 30  VRQSPGPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLNMGLSSFISRRHLQLSFQEPH 89

Query: 88  FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           F++ C GKNGVFVDG                                          AF+
Sbjct: 90  FYLRCLGKNGVFVDG------------------------------------------AFQ 107

Query: 148 RRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNP 207
           RR   G P  + P     +CT RFPST I++QF SL ++ + AP                
Sbjct: 108 RR---GAPALQLP----KQCTFRFPSTAIKIQFTSLYHKEE-APA--------------- 144

Query: 208 ATSSLLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR----- 256
             S L P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      
Sbjct: 145 --SPLRPLYPQISPLKIHIPE-PDLRSMVSPVPSPTGTISVPNSCPASPRGAGSSSYRFV 201

Query: 257 RNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLS 314
           +NV++DL +AA +AA   +    +       +D+SKPP+SYAQLIVQA++SA D+QLTLS
Sbjct: 202 QNVTSDLQLAAEFAAKAASEQQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDRQLTLS 261

Query: 315 GIYSFITKNYPYYRTADKGWQ 335
           GIY+ ITK+YPYYRTADKGWQ
Sbjct: 262 GIYAHITKHYPYYRTADKGWQ 282



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 283 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 342

Query: 163 -LSSR 166
            LSSR
Sbjct: 343 PLSSR 347


>gi|82546826|ref|NP_951031.2| forkhead box protein K1 [Mus musculus]
 gi|118572647|sp|P42128.2|FOXK1_MOUSE RecName: Full=Forkhead box protein K1; AltName: Full=Myocyte
           nuclear factor; Short=MNF
 gi|74181249|dbj|BAE27871.1| unnamed protein product [Mus musculus]
 gi|162319104|gb|AAI56274.1| Forkhead box K1 [synthetic construct]
          Length = 719

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 187/321 (58%), Gaps = 81/321 (25%)

Query: 28  IQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN 87
           ++   G A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+
Sbjct: 84  VRQSPGPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPH 143

Query: 88  FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           F++ C GKNGVFVDG                                          AF+
Sbjct: 144 FYLRCLGKNGVFVDG------------------------------------------AFQ 161

Query: 148 RRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNP 207
           RR   G P  + P     +CT RFPST I++QF SL ++ + AP                
Sbjct: 162 RR---GAPALQLP----QQCTFRFPSTAIKIQFTSLYHKEE-APA--------------- 198

Query: 208 ATSSLLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR----- 256
             S L P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      
Sbjct: 199 --SPLRPLYPQISPLKIHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSSYRFV 255

Query: 257 RNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLS 314
           +NV++DL +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLS
Sbjct: 256 QNVTSDLQLAAEFAAKAASEQQADASGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLS 315

Query: 315 GIYSFITKNYPYYRTADKGWQ 335
           GIY+ ITK+YPYYRTADKGWQ
Sbjct: 316 GIYAHITKHYPYYRTADKGWQ 336



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 337 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 396

Query: 163 -LSSR 166
            LSSR
Sbjct: 397 PLSSR 401


>gi|148687154|gb|EDL19101.1| forkhead box K1 [Mus musculus]
          Length = 632

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/316 (44%), Positives = 185/316 (58%), Gaps = 81/316 (25%)

Query: 33  GTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTC 92
           G A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+F++ C
Sbjct: 2   GPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPHFYLRC 61

Query: 93  NGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
            GKNGVFVDG                                          AF+RR   
Sbjct: 62  LGKNGVFVDG------------------------------------------AFQRR--- 76

Query: 153 GVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSL 212
           G P  + P     +CT RFPST I++QF SL ++ + AP                  S L
Sbjct: 77  GAPALQLP----QQCTFRFPSTAIKIQFTSLYHKEE-APA-----------------SPL 114

Query: 213 LP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
            P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++
Sbjct: 115 RPLYPQISPLKIHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTS 173

Query: 262 DLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSF 319
           DL +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ 
Sbjct: 174 DLQLAAEFAAKAASEQQADASGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAH 233

Query: 320 ITKNYPYYRTADKGWQ 335
           ITK+YPYYRTADKGWQ
Sbjct: 234 ITKHYPYYRTADKGWQ 249



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 250 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 309

Query: 163 -LSSR 166
            LSSR
Sbjct: 310 PLSSR 314


>gi|332864597|ref|XP_003318328.1| PREDICTED: forkhead box protein K1 [Pan troglodytes]
          Length = 733

 Score =  234 bits (596), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 141/316 (44%), Positives = 185/316 (58%), Gaps = 81/316 (25%)

Query: 33  GTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTC 92
           G A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+F++ C
Sbjct: 103 GPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPHFYLRC 162

Query: 93  NGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
            GKNGVFVDG                                          AF+RR   
Sbjct: 163 LGKNGVFVDG------------------------------------------AFQRR--- 177

Query: 153 GVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSL 212
           G P  + P     +CT RFPST I++QF SL ++ + AP                  S L
Sbjct: 178 GAPALQLP----KQCTFRFPSTAIKIQFTSLYHKEE-APA-----------------SPL 215

Query: 213 LP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
            P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++
Sbjct: 216 RPLYPQISPLKIHIPE-PDLRSMVSPVPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTS 274

Query: 262 DLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSF 319
           DL +AA +AA   +    +       +D+SKPP+SYAQLIVQA++SA D+QLTLSGIY+ 
Sbjct: 275 DLQLAAEFAAKAASEQQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDRQLTLSGIYAH 334

Query: 320 ITKNYPYYRTADKGWQ 335
           ITK+YPYYRTADKGWQ
Sbjct: 335 ITKHYPYYRTADKGWQ 350



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 351 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 410

Query: 163 -LSSR 166
            LSSR
Sbjct: 411 PLSSR 415


>gi|82546824|ref|NP_001032242.1| forkhead box protein K1 [Homo sapiens]
 gi|118572324|sp|P85037.1|FOXK1_HUMAN RecName: Full=Forkhead box protein K1; AltName: Full=Myocyte
           nuclear factor; Short=MNF
          Length = 733

 Score =  234 bits (596), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 141/316 (44%), Positives = 185/316 (58%), Gaps = 81/316 (25%)

Query: 33  GTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTC 92
           G A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+F++ C
Sbjct: 103 GPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPHFYLRC 162

Query: 93  NGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
            GKNGVFVDG                                          AF+RR   
Sbjct: 163 LGKNGVFVDG------------------------------------------AFQRR--- 177

Query: 153 GVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSL 212
           G P  + P     +CT RFPST I++QF SL ++ + AP                  S L
Sbjct: 178 GAPALQLP----KQCTFRFPSTAIKIQFTSLYHKEE-APA-----------------SPL 215

Query: 213 LP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
            P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++
Sbjct: 216 RPLYPQISPLKIHIPE-PDLRSMVSPVPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTS 274

Query: 262 DLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSF 319
           DL +AA +AA   +    +       +D+SKPP+SYAQLIVQA++SA D+QLTLSGIY+ 
Sbjct: 275 DLQLAAEFAAKAASEQQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDRQLTLSGIYAH 334

Query: 320 ITKNYPYYRTADKGWQ 335
           ITK+YPYYRTADKGWQ
Sbjct: 335 ITKHYPYYRTADKGWQ 350



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 351 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 410

Query: 163 -LSSR 166
            LSSR
Sbjct: 411 PLSSR 415


>gi|345801456|ref|XP_547003.3| PREDICTED: forkhead box protein K1 [Canis lupus familiaris]
          Length = 669

 Score =  233 bits (595), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 141/314 (44%), Positives = 183/314 (58%), Gaps = 81/314 (25%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNG 94
           A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+F++ C G
Sbjct: 46  ALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPHFYLRCLG 105

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           KNGVFVDG                                          AF+RR   G 
Sbjct: 106 KNGVFVDG------------------------------------------AFQRR---GA 120

Query: 155 PCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP 214
           P  + P     +CT RFPST I++QF SL  + + AP                  S L P
Sbjct: 121 PALQLP----KQCTFRFPSTAIKIQFTSLYRQEE-APA-----------------SPLRP 158

Query: 215 ------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADL 263
                 PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL
Sbjct: 159 LYPQISPLKIHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSGYRFVQNVTSDL 217

Query: 264 HMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
            +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ IT
Sbjct: 218 QLAAEFAAKAASEQQADTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHIT 277

Query: 322 KNYPYYRTADKGWQ 335
           K+YPYYRTADKGWQ
Sbjct: 278 KHYPYYRTADKGWQ 291



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 292 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 351

Query: 163 -LSSR 166
            LSSR
Sbjct: 352 PLSSR 356


>gi|508528|gb|AAA37529.1| myocyte nuclear factor [Mus musculus]
          Length = 617

 Score =  233 bits (595), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 142/316 (44%), Positives = 185/316 (58%), Gaps = 81/316 (25%)

Query: 33  GTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTC 92
           G A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+F++ C
Sbjct: 87  GPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPHFYLRC 146

Query: 93  NGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
            GKNGVFVDG                                          AF+RR   
Sbjct: 147 LGKNGVFVDG------------------------------------------AFQRR--- 161

Query: 153 GVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSL 212
           G P  + P     +CT RFPST I++QF SL ++ + AP                  S L
Sbjct: 162 GAPALQLP----QQCTFRFPSTAIKIQFTSLYHKEE-APA-----------------SPL 199

Query: 213 LP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
            P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++
Sbjct: 200 RPLYPQISPLKIHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTS 258

Query: 262 DLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSF 319
           DL +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ 
Sbjct: 259 DLQLAAEFAAKAASEQQADASGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAH 318

Query: 320 ITKNYPYYRTADKGWQ 335
           ITK+YPYYRTADKGWQ
Sbjct: 319 ITKHYPYYRTADKGWQ 334



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 335 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 394

Query: 163 -LSSR 166
            LSSR
Sbjct: 395 PLSSR 399


>gi|395845640|ref|XP_003795534.1| PREDICTED: forkhead box protein K1 [Otolemur garnettii]
          Length = 1042

 Score =  233 bits (595), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 142/314 (45%), Positives = 185/314 (58%), Gaps = 81/314 (25%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNG 94
           A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+F++ C G
Sbjct: 413 ALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPHFYLRCLG 472

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           KNGVFVDG                                          AF+RR   G 
Sbjct: 473 KNGVFVDG------------------------------------------AFQRR---GA 487

Query: 155 PCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP 214
           P  + P     +CT RFPST I++QF SL ++ + AP                  S L P
Sbjct: 488 PALQLP----KQCTFRFPSTAIKIQFTSLYHKEE-APA-----------------SPLRP 525

Query: 215 ------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADL 263
                 PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL
Sbjct: 526 LYPQISPLKIHIPE-PDLRSLVSPVPSPTGTISVPNSCPASPRGAGSSGYRFVQNVTSDL 584

Query: 264 HMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
            +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SAHD+QLTLSGIY+ IT
Sbjct: 585 QLAAEFAAKAASEQQADTSGGDSPKDESKPPYSYAQLIVQAISSAHDRQLTLSGIYAHIT 644

Query: 322 KNYPYYRTADKGWQ 335
           K+YPYYRTADKGWQ
Sbjct: 645 KHYPYYRTADKGWQ 658



 Score =  124 bits (311), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 659 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 718

Query: 163 -LSSR 166
            LSSR
Sbjct: 719 PLSSR 723


>gi|291413710|ref|XP_002723111.1| PREDICTED: forkhead box K1-like, partial [Oryctolagus cuniculus]
          Length = 628

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/313 (44%), Positives = 183/313 (58%), Gaps = 81/313 (25%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGK 95
           +A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+F++ C GK
Sbjct: 1   LARLEGREFEFLMRQASVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPHFYLRCLGK 60

Query: 96  NGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVP 155
           NGVFVDG                                          AF+RR   G P
Sbjct: 61  NGVFVDG------------------------------------------AFQRR---GAP 75

Query: 156 CFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP- 214
             + P     +CT RFPST I++QF SL ++ + AP                  S L P 
Sbjct: 76  ALQLP----KQCTFRFPSTAIKIQFTSLYHKEE-APA-----------------SPLRPL 113

Query: 215 -----PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLH 264
                PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL 
Sbjct: 114 YPQISPLKIHIPE-PDLRSMVSPIPSPTGTISVPNSCPASPRGAGSSGYRFVQNVTSDLQ 172

Query: 265 MAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITK 322
           +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK
Sbjct: 173 LAAEFAAKAASEQQADASGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITK 232

Query: 323 NYPYYRTADKGWQ 335
           +YPYYRTADKGWQ
Sbjct: 233 HYPYYRTADKGWQ 245



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 246 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 305

Query: 163 -LSSR 166
            LSSR
Sbjct: 306 PLSSR 310


>gi|2289235|gb|AAB69641.1| myocyte nuclear factor-beta [Mus musculus]
          Length = 409

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/316 (44%), Positives = 185/316 (58%), Gaps = 81/316 (25%)

Query: 33  GTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTC 92
           G A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+F++ C
Sbjct: 87  GPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPHFYLRC 146

Query: 93  NGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
            GKNGVFVDG                                          AF+RR   
Sbjct: 147 LGKNGVFVDG------------------------------------------AFQRR--- 161

Query: 153 GVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSL 212
           G P  + P     +CT RFPST I++QF SL ++ + AP                  S L
Sbjct: 162 GAPALQLP----QQCTFRFPSTAIKIQFTSLYHKEE-APA-----------------SPL 199

Query: 213 LP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
            P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++
Sbjct: 200 RPLYPQISPLKIHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTS 258

Query: 262 DLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSF 319
           DL +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ 
Sbjct: 259 DLQLAAEFAAKAASEQQADASGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAH 318

Query: 320 ITKNYPYYRTADKGWQ 335
           ITK+YPYYRTADKGWQ
Sbjct: 319 ITKHYPYYRTADKGWQ 334



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 335 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 394

Query: 163 -LSSR 166
            LSSR
Sbjct: 395 PLSSR 399


>gi|345305278|ref|XP_003428308.1| PREDICTED: forkhead box protein K1-like [Ornithorhynchus anatinus]
          Length = 868

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/320 (43%), Positives = 188/320 (58%), Gaps = 79/320 (24%)

Query: 28  IQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN 87
           ++   G A+A+L+GREFE+++RQ  +TIGRNSS+G VD+NMG SSFISRRH+++ F+ P+
Sbjct: 79  VRQSPGPALARLEGREFEFLMRQPAVTIGRNSSQGSVDLNMGHSSFISRRHLQLTFQEPH 138

Query: 88  FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           F++ C GKNGVFVDG                                          AF+
Sbjct: 139 FYLRCLGKNGVFVDG------------------------------------------AFQ 156

Query: 148 RRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNP 207
           RR   G P  + P     +CT RFPST I++QF SL ++ +  P+               
Sbjct: 157 RR---GAPALQLP----KQCTFRFPSTVIKIQFTSLYHKEEAPPS--------------- 194

Query: 208 ATSSLLP---PLRINIPDHPHTEISS--SPFPSPTGTISAANSCPTSPRGLHNR-----R 257
               L P   PL+I+IP+   +++ S  SP PSPTGTIS  NSCP SPRG  +      +
Sbjct: 195 PLRPLYPQISPLKIHIPE---SDLRSLVSPLPSPTGTISVPNSCPASPRGAGSSGYRFVQ 251

Query: 258 NVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSG 315
           N+++DL +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLSG
Sbjct: 252 NITSDLQLAAEFAAKAASEQQADTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSG 311

Query: 316 IYSFITKNYPYYRTADKGWQ 335
           IY+ ITK+YPYYRTADKGWQ
Sbjct: 312 IYAHITKHYPYYRTADKGWQ 331



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 332 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 391

Query: 163 -LSSR 166
            LSSR
Sbjct: 392 PLSSR 396


>gi|391343034|ref|XP_003745820.1| PREDICTED: forkhead box protein K2-like, partial [Metaseiulus
           occidentalis]
          Length = 335

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/314 (45%), Positives = 175/314 (55%), Gaps = 79/314 (25%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNG 94
            IA L+GREF Y VRQK+I IGRNSS G+VD+ MG SSFISRRH+EIF +  +FFM CNG
Sbjct: 17  CIAVLEGREFNYKVRQKQIAIGRNSSHGEVDIPMGNSSFISRRHLEIFNDGQDFFMVCNG 76

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           KNGVFVDG                                           F    QR  
Sbjct: 77  KNGVFVDG------------------------------------------VF----QRKA 90

Query: 155 PCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP 214
           P   +P  L  +C  RFPST+I++ F SL++ S       + +++     G+      + 
Sbjct: 91  P---SPLKLPQKCVFRFPSTSIKILFTSLLDPS----NSNTSTTTPTTTTGD------IK 137

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRG-----------LHNRRN--VSA 261
           PLRI+IPD        SP PSPTGTISAANSCPTSPR             H R+   V  
Sbjct: 138 PLRISIPDQ-------SPCPSPTGTISAANSCPTSPRSGSLMGSVHTIHPHYRQPNVVVG 190

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           +L       A  +N    ++ ++  D+ KPPYSYAQLIVQA++SA DKQLTLSGIY++IT
Sbjct: 191 NLVQRVVQCAPSSNTERAVTPTVGNDEQKPPYSYAQLIVQAISSAPDKQLTLSGIYTYIT 250

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 251 KNYPYYRTADKGWQ 264



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/57 (85%), Positives = 54/57 (94%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA 159
           NSIRHNLSLNRYF+KV R+QEEPGKGSFWRIDP SE KL+EQAF+RRRQRG+PCFRA
Sbjct: 265 NSIRHNLSLNRYFMKVARTQEEPGKGSFWRIDPASEEKLVEQAFKRRRQRGMPCFRA 321


>gi|388594886|gb|AFK74878.1| transcription factor FoxK1 [Hydra vulgaris]
          Length = 775

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/377 (39%), Positives = 189/377 (50%), Gaps = 104/377 (27%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQ---WKSGTAIAKLQGREFEYMVRQKRITIGR 57
           M+  S  +E  A ALL+L+       K++   W + + IAKL GREFEYMVRQ RI+IGR
Sbjct: 1   MACVSDEHEDPALALLSLRQGDSQNEKLKKPAWANNSPIAKLAGREFEYMVRQNRISIGR 60

Query: 58  NSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
           NS  GDVD+NMG SSFISR+H+EI +E P F+++  GKNGVFVDG               
Sbjct: 61  NSKLGDVDINMGHSSFISRKHLEIKYESPFFYLSTRGKNGVFVDGQ-------------- 106

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                       F+R   GSE  L                     L ++C LRFPSTNI+
Sbjct: 107 ------------FYR--KGSERIL---------------------LKNKCVLRFPSTNIK 131

Query: 178 LQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPT 237
           + F SL+++           SS   ++ +P     + PLRI+IPD     + SSP PSP+
Sbjct: 132 VWFTSLLDK-----------SSTDNLLASPPRQRSIIPLRISIPD--ADSVYSSPAPSPS 178

Query: 238 GTISAANSCPTSP-------------RGLHNRRNVSADLHM------------------- 265
           GTIS  NSCP SP              G H                              
Sbjct: 179 GTISVPNSCPVSPAQQNLPTPPDSQSSGQHQSYTSELLAAASAAADDDKEDSDGIDEFCE 238

Query: 266 -----AAHYAAAHTNVVNHMSLSISQDDS--KPPYSYAQLIVQAVASAHDKQLTLSGIYS 318
                ++  A   T+++  MS+     +S  KPPYSYAQLIVQA+ S+ DKQLTL+GIY 
Sbjct: 239 KSSQDSSDEAITPTSILPPMSIDGKSKNSGEKPPYSYAQLIVQAITSSADKQLTLNGIYQ 298

Query: 319 FITKNYPYYRTADKGWQ 335
           FI KNYPYYR  DKGWQ
Sbjct: 299 FIMKNYPYYRINDKGWQ 315



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 83/136 (61%), Gaps = 16/136 (11%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYF+KVPRSQ+EPGKGSFWRID   E KL+EQAFR+RRQRGV CFR P+ 
Sbjct: 316 NSIRHNLSLNRYFLKVPRSQDEPGKGSFWRIDLSCETKLMEQAFRKRRQRGVACFRPPY- 374

Query: 163 LSSRCTLRFPSTNIRL----QFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRI 218
           +SSR     P+  + L    + QS  NE D          + + +   PA    L P+RI
Sbjct: 375 ISSRSAPVSPTQGVMLPPSFKPQSRNNEDDQQDLNNLEEQNDLNLTLPPA----LQPVRI 430

Query: 219 NIPDHPHTEISSSPFP 234
                  + IS+ P P
Sbjct: 431 -------SSISAQPSP 439


>gi|31563338|ref|NP_004505.2| forkhead box protein K2 [Homo sapiens]
 gi|118572648|sp|Q01167.3|FOXK2_HUMAN RecName: Full=Forkhead box protein K2; AltName: Full=Cellular
           transcription factor ILF-1; AltName: Full=FOXK1;
           AltName: Full=Interleukin enhancer-binding factor 1
          Length = 660

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/328 (44%), Positives = 177/328 (53%), Gaps = 87/328 (26%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIF------------ 82
           A+A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF            
Sbjct: 36  AVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGGGHGGAA 95

Query: 83  FEHP----------NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWR 132
            E P          +F++ C GKNGVFVDG                              
Sbjct: 96  PELPPAQPRPDAGGDFYLRCLGKNGVFVDG------------------------------ 125

Query: 133 IDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPT 192
                        F+RR   G P    P  L   CT RFPSTNI++ F +L +E      
Sbjct: 126 ------------VFQRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---E 163

Query: 193 GQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRG 252
            Q  S S V      A    + PL INIPD     IS  P PSPTGTISAANSCP+SPRG
Sbjct: 164 KQEASESPVK-----AVQPHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRG 216

Query: 253 LHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
             +      R + +DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A 
Sbjct: 217 AGSSGYKVGRVMPSDLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAP 275

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 276 DKQLTLNGIYTHITKNYPYYRTADKGWQ 303



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 304 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 363

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 364 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 401


>gi|348510016|ref|XP_003442542.1| PREDICTED: forkhead box protein K2 [Oreochromis niloticus]
          Length = 607

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/315 (44%), Positives = 173/315 (54%), Gaps = 81/315 (25%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEH--PNFFMTCN 93
           +A+L+GREFEYM++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF +    +F++ C 
Sbjct: 11  VARLEGREFEYMMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTDDGTGDFYLKCL 70

Query: 94  GKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           GKNGVFVDG  +R                                             RG
Sbjct: 71  GKNGVFVDGVFLR---------------------------------------------RG 85

Query: 154 VPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLL 213
            P    P  L   CT RFPSTNI++ F +L              SSG  V      S + 
Sbjct: 86  AP----PLQLPRMCTFRFPSTNIKIAFTAL--------------SSGKKVKREAPESPVK 127

Query: 214 P------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRG-------LHNRRNVS 260
           P      PL INIP++    +  SP PSPTGTISAANSCP+SPRG       +  R   S
Sbjct: 128 PVQPQISPLTINIPENIAHLM--SPLPSPTGTISAANSCPSSPRGAGSSGYRMGGRMVSS 185

Query: 261 ADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFI 320
           A+L +    +    +       S  +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ I
Sbjct: 186 AELQLINDNSQPENDKEASGGDS-PKDDSKPPYSYAQLIVQAITLAPDKQLTLNGIYNHI 244

Query: 321 TKNYPYYRTADKGWQ 335
           TKNYPYYRTADKGWQ
Sbjct: 245 TKNYPYYRTADKGWQ 259



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 260 NSIRHNLSLNRYFIKVARSQEEPGKGSFWRIDPSSEAKLIEQAFRKRRPRGVPCFRTPHG 319

Query: 163 -LSSR 166
            LSSR
Sbjct: 320 PLSSR 324


>gi|332849394|ref|XP_003315834.1| PREDICTED: forkhead box protein K2, partial [Pan troglodytes]
          Length = 646

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/328 (44%), Positives = 177/328 (53%), Gaps = 87/328 (26%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFF----------- 83
           A+A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF            
Sbjct: 22  AVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGGGHGGAA 81

Query: 84  -EHP----------NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWR 132
            E P          +F++ C GKNGVFVDG                              
Sbjct: 82  QELPPAQPRPDAGGDFYLRCLGKNGVFVDG------------------------------ 111

Query: 133 IDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPT 192
                        F+RR   G P    P  L   CT RFPSTNI++ F +L +E      
Sbjct: 112 ------------VFQRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---E 149

Query: 193 GQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRG 252
            Q  S S V      A    + PL INIPD     IS  P PSPTGTISAANSCP+SPRG
Sbjct: 150 KQEASESPVK-----AVQPHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRG 202

Query: 253 LHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
             +      R + +DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A 
Sbjct: 203 AGSSGYKVGRVMPSDLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAP 261

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 262 DKQLTLNGIYTHITKNYPYYRTADKGWQ 289



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 290 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 349

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 350 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 387


>gi|238054027|ref|NP_001153934.1| forkhead box K1 [Oryzias latipes]
 gi|226441740|gb|ACO57472.1| forkhead box K1 [Oryzias latipes]
          Length = 563

 Score =  224 bits (572), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/340 (41%), Positives = 179/340 (52%), Gaps = 88/340 (25%)

Query: 25  PSKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFF- 83
           P+++      A+A+L+GR+FE+++RQ+ +TIGRNSS G VD+NMG SSFISRRH+ I + 
Sbjct: 56  PARLSSTPPRALARLEGRDFEFVMRQRTVTIGRNSSHGSVDINMGHSSFISRRHLLISYD 115

Query: 84  EHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIE 143
           E   F + C GKNGVFVDG                                         
Sbjct: 116 EASGFSLRCLGKNGVFVDG----------------------------------------- 134

Query: 144 QAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGV 203
             F+RR   G P    P  L   C  RFPST I++QF S ++  +   T Q         
Sbjct: 135 -VFQRR---GAP----PLSLPRECVFRFPSTVIKIQFMSFLDAEEHRETEQPSPPPA--- 183

Query: 204 MGNPATSSLLPPLRINIPD----HPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR--- 256
                    + PL+I+IP       H    SSP PSPTGTIS  NSCP SPRG  +    
Sbjct: 184 ----PLLPRISPLKISIPTAQQHEEHIRAFSSPLPSPTGTISVPNSCPASPRGAGSSGYR 239

Query: 257 --RNVSADLHMAAHYAAAHTNVVNHMSLSISQ-------------------DDSKPPYSY 295
             RNV++DL +AA +AA     V+     +++                   D+SKPPYSY
Sbjct: 240 YGRNVTSDLQLAAEFAA---KAVSEQRRGLAEQRGGGSEQRGEAAGGDSPKDESKPPYSY 296

Query: 296 AQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           AQLIVQA++SA DKQLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 297 AQLIVQAISSAPDKQLTLSGIYAHITKHYPYYRTADKGWQ 336



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 60/98 (61%), Positives = 68/98 (69%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYF+KV RSQ+EPGKGSFWR+D  SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 337 NSIRHNLSLNRYFLKVARSQDEPGKGSFWRLDSASETKLVEQAFRKRRQRGVACFRTPFG 396

Query: 163 -LSSRCT--------LRFPSTNIRLQFQSLVNESDPAP 191
            LSSR          L  PS++     + L  E  P P
Sbjct: 397 PLSSRSAPASPTHQGLLSPSSSGLQTPECLSREGSPVP 434


>gi|432867421|ref|XP_004071183.1| PREDICTED: forkhead box protein K2-like [Oryzias latipes]
          Length = 604

 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 142/318 (44%), Positives = 174/318 (54%), Gaps = 83/318 (26%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN------FF 89
           +A+L+GREFEYM++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF    +      F+
Sbjct: 11  VARLEGREFEYMMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTTSDDGSASGDFY 70

Query: 90  MTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           + C GKNGVFVDG  +R                                           
Sbjct: 71  LRCLGKNGVFVDGVFLR------------------------------------------- 87

Query: 150 RQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPAT 209
             RG P    P  L   CT RFPSTNI++ F +L        TG+ V       M     
Sbjct: 88  --RGAP----PLQLPRMCTFRFPSTNIKITFTALS-------TGKKVKRE----MPESPV 130

Query: 210 SSLLP---PLRINIPDHPHTEIS--SSPFPSPTGTISAANSCPTSPRG-------LHNRR 257
            ++ P   PL INIPD+    IS   SP PSPTGTISAANSCP+SPRG       +  R 
Sbjct: 131 KAVQPQISPLTINIPDN----ISHLMSPLPSPTGTISAANSCPSSPRGAGSSGYRMGGRM 186

Query: 258 NVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIY 317
             SA+L +    +    +       S  +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY
Sbjct: 187 VSSAELQLINDNSQPENDKEASGGDS-PKDDSKPPYSYAQLIVQAITLAPDKQLTLNGIY 245

Query: 318 SFITKNYPYYRTADKGWQ 335
           + ITKNYPYYRTADKGWQ
Sbjct: 246 NHITKNYPYYRTADKGWQ 263



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 56/65 (86%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQEEPGKGSFWRIDP SE KLI+QAFR+RR RGVPCFR P G
Sbjct: 264 NSIRHNLSLNRYFIKVARSQEEPGKGSFWRIDPSSEAKLIDQAFRKRRPRGVPCFRTPHG 323

Query: 163 -LSSR 166
            LSSR
Sbjct: 324 PLSSR 328


>gi|213982945|ref|NP_001135634.1| forkhead box K2 [Xenopus (Silurana) tropicalis]
 gi|197245585|gb|AAI68486.1| Unknown (protein for MGC:172864) [Xenopus (Silurana) tropicalis]
          Length = 645

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/314 (44%), Positives = 173/314 (55%), Gaps = 76/314 (24%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIF---------FEHP 86
           +A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF          +  
Sbjct: 13  VARLEGREFEYLMKKRSVTIGRNSSQGCVDVSMGHSSFISRRHLEIFTGGSAEGDEADTA 72

Query: 87  NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           +F++ C GKNGVFVDG                                           F
Sbjct: 73  DFYLRCLGKNGVFVDG------------------------------------------VF 90

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR   G P    P  L   CT RFPSTNI++ F +L ++       Q + +    V   
Sbjct: 91  QRR---GAP----PLQLPRVCTFRFPSTNIKITFTALASDKK-----QKLEAPESPVK-- 136

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
                 + PL INIPD+    IS  P PSPTGTISAANSCP+SPRG  +      R +  
Sbjct: 137 -PVQPQISPLTINIPDNMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGFKLGRVIPP 193

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           DL      AA   N  +       +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 194 DL---IAEAAQSENDKDASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 250

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 251 KNYPYYRTADKGWQ 264



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/117 (58%), Positives = 77/117 (65%), Gaps = 6/117 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 265 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 324

Query: 163 -LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRI 218
            LSSR     P+         L   S    T +S+S  G  +   P  S++ P L +
Sbjct: 325 PLSSRSAPASPN-----HAGVLSAHSSGLQTPESLSREGSPIPMEPEPSAIQPKLAV 376


>gi|402901468|ref|XP_003913671.1| PREDICTED: forkhead box protein K2 [Papio anubis]
          Length = 663

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/331 (43%), Positives = 175/331 (52%), Gaps = 90/331 (27%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHP-------- 86
           A+A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF            
Sbjct: 36  AVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGGGGGGHG 95

Query: 87  -----------------NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGS 129
                            +F++ C GKNGVFVDG                           
Sbjct: 96  GAAPEPPPAQPRPDAGGDFYLRCLGKNGVFVDG--------------------------- 128

Query: 130 FWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDP 189
                           F+RR   G P    P  L   CT RFPSTNI++ F +L +E   
Sbjct: 129 ---------------VFQRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR- 165

Query: 190 APTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTS 249
               Q +S S V      A    + PL INIPD     IS  P PSPTGTISAANSCP+S
Sbjct: 166 --EKQELSESPVK-----AVQPHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSS 216

Query: 250 PRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVA 304
           PRG  +      R + +DL + A  +    N          +DDSKPPYSYAQLIVQA+ 
Sbjct: 217 PRGAGSSGYKVGRVMPSDLSLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAIT 275

Query: 305 SAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 276 MAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 306



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 307 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 366

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 367 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 404


>gi|120538605|gb|AAI29152.1| Foxk2 protein [Danio rerio]
          Length = 584

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/314 (43%), Positives = 179/314 (57%), Gaps = 76/314 (24%)

Query: 32  SGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN---- 87
           +G  +A+L+GREFEY+++++ +T+GRNSS+G VDV+MG SSFISRRH+EIF    +    
Sbjct: 42  AGPVVARLEGREFEYLMKKRSVTVGRNSSQGSVDVSMGHSSFISRRHLEIFSAGEDGAGE 101

Query: 88  FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           F++ C GKNGVFVDG                                          AF+
Sbjct: 102 FYLRCLGKNGVFVDG------------------------------------------AFQ 119

Query: 148 RRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNP 207
           R   RG P    P  L   CTLRFPSTNI++ F +L ++               G +  P
Sbjct: 120 R---RGAP----PLQLPRACTLRFPSTNIKISFTALCSD----------QRECRGALEVP 162

Query: 208 ATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL-----HNRRNVSAD 262
             + +  PL I+IP++  T +  SP PSPTGTISAANSCP+SPRG         R ++A+
Sbjct: 163 VKAQIS-PLTISIPEN-ITHL-RSPLPSPTGTISAANSCPSSPRGAGLSSYRMGRGLTAE 219

Query: 263 LHMAAHYAAAHTNVVNHMSLSIS-QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           L        + + +    S   S +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 220 L----INENSQSEIDKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 275

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 276 KNYPYYRTADKGWQ 289



 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 55/65 (84%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQEEPGKGSFWRIDP SE KL++QAFR+RR RGVPCFR P G
Sbjct: 290 NSIRHNLSLNRYFIKVARSQEEPGKGSFWRIDPSSEGKLMDQAFRKRRPRGVPCFRTPLG 349

Query: 163 -LSSR 166
            LSSR
Sbjct: 350 PLSSR 354


>gi|157170406|gb|AAI52768.1| Forkhead box K2 [synthetic construct]
          Length = 809

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/325 (44%), Positives = 175/325 (53%), Gaps = 84/325 (25%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFE---------- 84
           A+A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF            
Sbjct: 188 AVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGGHSAAAP 247

Query: 85  ---HP------NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP 135
               P      +F++ C GKNGVFVDG                                 
Sbjct: 248 EPAQPRPDAGGDFYLRCLGKNGVFVDG--------------------------------- 274

Query: 136 GSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQS 195
                     F+RR   G P    P  L   CT RFPSTNI++ F +L +E       Q 
Sbjct: 275 ---------VFQRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQE 315

Query: 196 VSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHN 255
              S V  +  P  S    PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +
Sbjct: 316 APESPVKPV-QPHIS----PLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGS 368

Query: 256 R-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQ 310
                 R + +DL + A  +    N          +DDSKPPYSYAQLIVQA+  A DKQ
Sbjct: 369 SGYKVGRVMPSDLSLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQ 427

Query: 311 LTLSGIYSFITKNYPYYRTADKGWQ 335
           LTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 428 LTLNGIYTHITKNYPYYRTADKGWQ 452



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 453 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 512

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 513 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 550


>gi|46249732|gb|AAH68417.1| Foxk2 protein, partial [Danio rerio]
          Length = 579

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/314 (43%), Positives = 179/314 (57%), Gaps = 76/314 (24%)

Query: 32  SGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN---- 87
           +G  +A+L+GREFEY+++++ +T+GRNSS+G VDV+MG SSFISRRH+EIF    +    
Sbjct: 37  AGPVVARLEGREFEYLMKKRSVTVGRNSSQGSVDVSMGHSSFISRRHLEIFSAGEDGAGE 96

Query: 88  FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           F++ C GKNGVFVDG                                          AF+
Sbjct: 97  FYLRCLGKNGVFVDG------------------------------------------AFQ 114

Query: 148 RRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNP 207
           R   RG P    P  L   CTLRFPSTNI++ F +L ++               G +  P
Sbjct: 115 R---RGAP----PLQLPRACTLRFPSTNIKISFTALCSD----------QRECRGALEVP 157

Query: 208 ATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL-----HNRRNVSAD 262
             + +  PL I+IP++  T +  SP PSPTGTISAANSCP+SPRG         R ++A+
Sbjct: 158 VKAQIS-PLTISIPEN-ITHL-RSPLPSPTGTISAANSCPSSPRGAGLSSYRMGRGLTAE 214

Query: 263 LHMAAHYAAAHTNVVNHMSLSIS-QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           L        + + +    S   S +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 215 L----INENSQSEIDKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 270

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 271 KNYPYYRTADKGWQ 284



 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 55/65 (84%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQEEPGKGSFWRIDP SE KL++QAFR+RR RGVPCFR P G
Sbjct: 285 NSIRHNLSLNRYFIKVARSQEEPGKGSFWRIDPSSEGKLMDQAFRKRRPRGVPCFRTPLG 344

Query: 163 -LSSR 166
            LSSR
Sbjct: 345 PLSSR 349


>gi|166796247|gb|AAI59230.1| Foxk2 protein [Danio rerio]
          Length = 585

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/314 (43%), Positives = 179/314 (57%), Gaps = 76/314 (24%)

Query: 32  SGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN---- 87
           +G  +A+L+GREFEY+++++ +T+GRNSS+G VDV+MG SSFISRRH+EIF    +    
Sbjct: 43  AGPVVARLEGREFEYLMKKRSVTVGRNSSQGSVDVSMGHSSFISRRHLEIFSAGEDGAGE 102

Query: 88  FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           F++ C GKNGVFVDG                                          AF+
Sbjct: 103 FYLRCLGKNGVFVDG------------------------------------------AFQ 120

Query: 148 RRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNP 207
           R   RG P    P  L   CTLRFPSTNI++ F +L ++               G +  P
Sbjct: 121 R---RGAP----PLQLPRACTLRFPSTNIKISFTALCSD----------QRECRGALEVP 163

Query: 208 ATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL-----HNRRNVSAD 262
             + +  PL I+IP++  T +  SP PSPTGTISAANSCP+SPRG         R ++A+
Sbjct: 164 VKAQIS-PLTISIPEN-ITHL-RSPLPSPTGTISAANSCPSSPRGAGLSSYRMGRGLTAE 220

Query: 263 LHMAAHYAAAHTNVVNHMSLSIS-QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           L        + + +    S   S +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 221 L----INENSQSEIDKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 276

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 277 KNYPYYRTADKGWQ 290



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 55/65 (84%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQEEPGKGSFWRIDP SE KL++QAFR+RR RGVPCFR P G
Sbjct: 291 NSIRHNLSLNRYFIKVARSQEEPGKGSFWRIDPSSEGKLMDQAFRKRRPRGVPCFRTPLG 350

Query: 163 -LSSR 166
            LSSR
Sbjct: 351 PLSSR 355


>gi|426255460|ref|XP_004021366.1| PREDICTED: forkhead box protein K1, partial [Ovis aries]
          Length = 733

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 179/326 (54%), Gaps = 87/326 (26%)

Query: 26  SKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEH 85
           + ++   G A+A+L+GREFE+++RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ 
Sbjct: 4   ASVRRSPGPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQE 63

Query: 86  PNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQA 145
           P+F++ C GKNGVFV+G              K P              DP +        
Sbjct: 64  PHFYLRCLGKNGVFVEGT------------FKFP-------------ADPAAR------- 91

Query: 146 FRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMG 205
                            L  +CT RFPST I++QF SL ++ + AP              
Sbjct: 92  -----------------LPRQCTFRFPSTAIKIQFTSLYHQEE-APA------------- 120

Query: 206 NPATSSLLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL-----H 254
               S L P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG       
Sbjct: 121 ----SPLRPLYPQISPLKIHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSSYR 175

Query: 255 NRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDS-----KPPYSYAQLIVQAVASAHDK 309
           + +NV++DL +AA          +      S  DS      PPYSYAQLIVQA++SA D+
Sbjct: 176 SVQNVTSDLQLAA---EFAARAASEQQADTSGGDSPKPSPAPPYSYAQLIVQAISSAQDR 232

Query: 310 QLTLSGIYSFITKNYPYYRTADKGWQ 335
           QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 233 QLTLSGIYAHITKHYPYYRTADKGWQ 258



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 259 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 318

Query: 163 -LSSR 166
            LSSR
Sbjct: 319 PLSSR 323


>gi|45551655|gb|AAS68038.1| forkhead box protein K1 isoform delta [Takifugu rubripes]
 gi|45551657|gb|AAS68039.1| forkhead box protein K1 isoform gamma [Takifugu rubripes]
          Length = 344

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/351 (39%), Positives = 182/351 (51%), Gaps = 88/351 (25%)

Query: 25  PSKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFE 84
           P ++      A+A+L+GR+FE+++RQ+ +TIGRNSS G VD+NMG SSFISRRH+E+ ++
Sbjct: 52  PVRVACPPPQALARLEGRDFEFVMRQRTVTIGRNSSHGSVDINMGHSSFISRRHLELNYD 111

Query: 85  HPN-FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIE 143
             N F + C GKNGVFVDG                                         
Sbjct: 112 EANGFSLRCLGKNGVFVDG----------------------------------------- 130

Query: 144 QAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGV 203
             F+RR          P  L   C  RFPST I++QF SL+   +     Q +       
Sbjct: 131 -VFQRRGA-------LPLSLPRECVFRFPSTVIKIQFTSLLEPEEHREKEQPLLPPR--- 179

Query: 204 MGNPATSSLLPPLRINIPD----HPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR--- 256
                    + PL+I+IP       H     SP PSPT TIS  NSCP SPRG  +    
Sbjct: 180 ----PLLPHISPLKISIPTMQQHEEHIRAFGSPLPSPTDTISVPNSCPASPRGAGSSGYR 235

Query: 257 --RNVSADLHMAAHYAAAHTNVVNHMSLSISQ-------------------DDSKPPYSY 295
             R+V++DL +AA YAA     V+    S+++                   D+SKPPYSY
Sbjct: 236 FGRSVTSDLQLAAEYAA---KAVSEQRRSLAEPRGGGSDQRGESAGGDSPKDESKPPYSY 292

Query: 296 AQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQVNYTYLDTTSV 346
           AQLIVQA++SA DKQLTLSGIY+ ITK+YPYYRTADKGWQV   +L   ++
Sbjct: 293 AQLIVQAISSAPDKQLTLSGIYAHITKHYPYYRTADKGWQVGPFWLKLNAL 343


>gi|335297203|ref|XP_003357968.1| PREDICTED: forkhead box protein K2-like [Sus scrofa]
          Length = 656

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/327 (43%), Positives = 176/327 (53%), Gaps = 86/327 (26%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHP-------- 86
           A+A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF            
Sbjct: 35  AVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGGGHGGAA 94

Query: 87  -------------NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRI 133
                        +F++ C GKNGVFVDG                               
Sbjct: 95  PEPSAQPGPDAGGDFYLRCLGKNGVFVDG------------------------------- 123

Query: 134 DPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTG 193
                       F+RR   G P    P  L   CT RFPSTNI++ F +L +E     T 
Sbjct: 124 -----------VFQRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKRE--TK 163

Query: 194 QSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL 253
           ++  S    V  +      + PL INIPD     IS  P PSPTGTISAANSCP+SPRG 
Sbjct: 164 EAPESPVKPVQAH------ISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGA 215

Query: 254 HNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHD 308
            +      R + +DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A D
Sbjct: 216 GSSGYKMGRVIPSDLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPD 274

Query: 309 KQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 275 KQLTLNGIYTHITKNYPYYRTADKGWQ 301



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 302 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 361

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 362 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 399


>gi|238018071|ref|NP_001074401.2| forkhead box protein K2 [Mus musculus]
 gi|341941094|sp|Q3UCQ1.3|FOXK2_MOUSE RecName: Full=Forkhead box protein K2; AltName: Full=Cellular
           transcription factor ILF-1; AltName: Full=Interleukin
           enhancer-binding factor 1
 gi|195975847|gb|ACG63496.1| interleukin enhancer binding factor 1 [Mus musculus]
          Length = 651

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/325 (44%), Positives = 175/325 (53%), Gaps = 84/325 (25%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFF----------- 83
           A+A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF            
Sbjct: 30  AVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGGHSAAAP 89

Query: 84  --EHP------NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP 135
               P      +F++ C GKNGVFVDG                                 
Sbjct: 90  EPAQPRPDAGGDFYLRCLGKNGVFVDG--------------------------------- 116

Query: 136 GSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQS 195
                     F+RR   G P    P  L   CT RFPSTNI++ F +L +E       Q 
Sbjct: 117 ---------VFQRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQE 157

Query: 196 VSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHN 255
              S V  +  P  S    PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +
Sbjct: 158 APESPVKPV-QPHIS----PLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGS 210

Query: 256 R-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQ 310
                 R + +DL + A  +    N          +DDSKPPYSYAQLIVQA+  A DKQ
Sbjct: 211 SGYKVGRVMPSDLSLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQ 269

Query: 311 LTLSGIYSFITKNYPYYRTADKGWQ 335
           LTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 270 LTLNGIYTHITKNYPYYRTADKGWQ 294



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 295 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 354

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 355 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 392


>gi|410895647|ref|XP_003961311.1| PREDICTED: forkhead box protein K2-like [Takifugu rubripes]
          Length = 614

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/313 (44%), Positives = 178/313 (56%), Gaps = 71/313 (22%)

Query: 33  GTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIF------FEHP 86
           G+A+A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF        + 
Sbjct: 9   GSAVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTGGEGGASNG 68

Query: 87  NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
            F++ C GKNGVFVDG                                           F
Sbjct: 69  EFYLRCLGKNGVFVDG------------------------------------------VF 86

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLV-NESDPAPTGQSVSSSGVGVMG 205
           +RR   G P    P  L   C  RFPST+I++ F +L  ++ +P    ++V  S V    
Sbjct: 87  QRR---GAP----PLQLPRMCCFRFPSTSIKITFTALSSDKKEP----RNVPESPVK--- 132

Query: 206 NPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHM 265
             +    + PL INIPD+    +S  P PSPTGTISAANSCP+SPRG       +  + M
Sbjct: 133 --SVQPQISPLTINIPDNIAHLMS--PLPSPTGTISAANSCPSSPRGAGLSSYKTGRV-M 187

Query: 266 AAHYAAAHTNVVNHMSLSIS---QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITK 322
           A+     ++   N    S     +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITK
Sbjct: 188 ASDLIGDNSQSENDKEASGEDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITK 247

Query: 323 NYPYYRTADKGWQ 335
           NYPYYRTADKGWQ
Sbjct: 248 NYPYYRTADKGWQ 260



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 261 NSIRHNLSLNRYFIKVARSQEEPGKGSFWRIDPSSESKLIEQAFRKRRPRGVPCFRTPVG 320

Query: 163 -LSSR 166
            LSSR
Sbjct: 321 PLSSR 325


>gi|395533769|ref|XP_003768925.1| PREDICTED: forkhead box protein K2, partial [Sarcophilus harrisii]
          Length = 686

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 144/341 (42%), Positives = 178/341 (52%), Gaps = 98/341 (28%)

Query: 29  QWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIF------ 82
           QW    A+A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF      
Sbjct: 53  QW----AVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGS 108

Query: 83  -----------------------FEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVP 119
                                      +F++ C GKNGVFVDG                 
Sbjct: 109 PTPLAFGAGEQQSQLQPPAQQPPPTGGDFYLRCLGKNGVFVDG----------------- 151

Query: 120 RSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQ 179
                                     F+RR   G P    P  L   CT RFPSTNI++ 
Sbjct: 152 -------------------------VFQRR---GAP----PLQLPRVCTFRFPSTNIKIT 179

Query: 180 FQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGT 239
           F +L +E       Q    S V     P    + P L INIPD+    IS  P PSPTGT
Sbjct: 180 FTALSSEKK---EKQEAPESPV----KPVQPQITP-LTINIPDNMAHLIS--PLPSPTGT 229

Query: 240 ISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYS 294
           ISAANSCP+SPRG  +      R +  DLH+ A  + +  +       S  +DDSKPPYS
Sbjct: 230 ISAANSCPSSPRGAGSSGYKMGRVLPTDLHLMADNSQSENDKEASGGDS-PKDDSKPPYS 288

Query: 295 YAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           YAQLIVQA+  + DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 289 YAQLIVQAITMSPDKQLTLNGIYTHITKNYPYYRTADKGWQ 329



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 70/117 (59%), Positives = 80/117 (68%), Gaps = 6/117 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 330 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 389

Query: 163 -LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRI 218
            LSSR     P+ +  L   S   +     T +S+S  G  V  +P  S++ P L +
Sbjct: 390 PLSSRSAPASPNHSGVLSAHSSGVQ-----TPESLSREGSPVPMDPEPSAIQPKLAV 441


>gi|410917822|ref|XP_003972385.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein K1 [Takifugu
           rubripes]
          Length = 700

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 177/340 (52%), Gaps = 88/340 (25%)

Query: 25  PSKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFE 84
           P ++      A+A+L+GR+FE+++RQ+ +TIGRNSS G VD+NMG SSFISRRH+E+ ++
Sbjct: 57  PVRVACPPPQALARLEGRDFEFVMRQRTVTIGRNSSHGSVDINMGHSSFISRRHLELNYD 116

Query: 85  HPN-FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIE 143
             N F + C GKNGVFVDG                                         
Sbjct: 117 EANGFSLRCLGKNGVFVDG----------------------------------------- 135

Query: 144 QAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGV 203
             F+RR          P  L   C  RFPST I++QF SL+   +     Q +       
Sbjct: 136 -VFQRRGA-------LPLSLPRECVFRFPSTVIKIQFTSLLEPEEHREKEQPLLPPR--- 184

Query: 204 MGNPATSSLLPPLRINIPD----HPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR--- 256
                    + PL+I+IP       H     SP PSPT TIS  NSCP SPRG  +    
Sbjct: 185 ----PLLPHISPLKISIPTMQQHEEHIRAFGSPLPSPTDTISVPNSCPASPRGAGSSGYR 240

Query: 257 --RNVSADLHMAAHYAAAHTNVVNHMSLSISQ-------------------DDSKPPYSY 295
             R+V++DL +AA YAA     V+    S+++                   D+SKPPYSY
Sbjct: 241 FGRSVTSDLQLAAEYAA---KAVSEQRRSLAEPRGGGSDQRGESAGGDSPKDESKPPYSY 297

Query: 296 AQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           AQLIVQA++SA DKQLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 298 AQLIVQAISSAPDKQLTLSGIYAHITKHYPYYRTADKGWQ 337



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/99 (61%), Positives = 70/99 (70%), Gaps = 11/99 (11%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYF+KV RSQ+EPGKGSFWR+D  SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 338 NSIRHNLSLNRYFLKVARSQDEPGKGSFWRLDSASESKLVEQAFRKRRQRGVACFRTPFG 397

Query: 163 -LSSRCT---------LRFPSTNIRLQFQSLVNESDPAP 191
            LSSR           L  PS+ ++   +SL  E  P P
Sbjct: 398 PLSSRSAPASPTHQGLLSPPSSGLQTP-ESLSREGSPIP 435


>gi|327264796|ref|XP_003217197.1| PREDICTED: forkhead box protein K2-like [Anolis carolinensis]
          Length = 804

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 145/343 (42%), Positives = 177/343 (51%), Gaps = 105/343 (30%)

Query: 38  KLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHP----------- 86
           +L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF   P           
Sbjct: 165 RLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTAPPAQAPAVSNNSS 224

Query: 87  -----------------------------NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
                                        +F++ C GKNGVFVDG               
Sbjct: 225 NAAAPAAATAGPGPQSQAPNPAPAASSGGDFYLRCLGKNGVFVDG--------------- 269

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                                       F+RR   G P    P  L   CT RFPSTNI+
Sbjct: 270 ---------------------------VFQRR---GAP----PLQLPRVCTFRFPSTNIK 295

Query: 178 LQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPT 237
           + F +L NE       Q    S V  +  P  S    PL INIPD+    IS  P PSPT
Sbjct: 296 ITFTALSNEKR---EKQESPQSPVKPV-QPQIS----PLTINIPDNMAHLIS--PLPSPT 345

Query: 238 GTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPP 292
           GTISAANSCP+SPRG  +      R +S+DLH+ A  + +  +       S  +DDSKPP
Sbjct: 346 GTISAANSCPSSPRGAGSSGYKMGRVISSDLHLMADNSQSENDKEASGGDS-PKDDSKPP 404

Query: 293 YSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           YSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 405 YSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 447



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 448 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 507

Query: 163 -LSSR 166
            LSSR
Sbjct: 508 PLSSR 512


>gi|126309470|ref|XP_001374306.1| PREDICTED: forkhead box protein K2 [Monodelphis domestica]
          Length = 681

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 144/346 (41%), Positives = 176/346 (50%), Gaps = 103/346 (29%)

Query: 33  GTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIF---------- 82
           G A+A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF          
Sbjct: 39  GWAVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGSSPTPM 98

Query: 83  ----------------------------FEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRY 114
                                           +F++ C GKNGVFVDG            
Sbjct: 99  ASGGEEQQSQPQLLAQQQQPPPPPPPPPPAGGDFYLRCLGKNGVFVDG------------ 146

Query: 115 FIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPST 174
                                          F+RR   G P    P  L   CT RFPST
Sbjct: 147 ------------------------------VFQRR---GAP----PLQLPRVCTFRFPST 169

Query: 175 NIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFP 234
           NI++ F +L NE       Q    S V     P    + P L INIPD+    IS  P P
Sbjct: 170 NIKITFTALSNEKR---EKQEAPESPV----KPVQPQITP-LTINIPDNMAHLIS--PLP 219

Query: 235 SPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDS 289
           SPTGTISAANSCP+SPRG  +      R +  DLH+    + +  +       S  +DDS
Sbjct: 220 SPTGTISAANSCPSSPRGAGSSGYKMGRVLPTDLHLMTDNSQSENDKEASGGDS-PKDDS 278

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 279 KPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 324



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/117 (58%), Positives = 80/117 (68%), Gaps = 6/117 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 325 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 384

Query: 163 -LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRI 218
            LSSR     P+ +  L   S   +     T +S+S  G  V  +P  +++ P L +
Sbjct: 385 PLSSRSAPASPNHSGVLSAHSSGVQ-----TPESLSREGSPVPMDPEPNAIQPKLAV 436


>gi|45551653|gb|AAS68037.1| forkhead box protein K1 isoform alpha [Takifugu rubripes]
          Length = 558

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 177/340 (52%), Gaps = 88/340 (25%)

Query: 25  PSKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFE 84
           P ++      A+A+L+GR+FE+++RQ+ +TIGRNSS G VD+NMG SSFISRRH+E+ ++
Sbjct: 52  PVRVACPPPQALARLEGRDFEFVMRQRTVTIGRNSSHGSVDINMGHSSFISRRHLELNYD 111

Query: 85  HPNFF-MTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIE 143
             N F + C GKNGVFVDG                                         
Sbjct: 112 EANGFSLRCLGKNGVFVDG----------------------------------------- 130

Query: 144 QAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGV 203
             F+RR          P  L   C  RFPST I++QF SL+   +     Q +       
Sbjct: 131 -VFQRRGA-------LPLSLPRECVFRFPSTVIKIQFTSLLEPEEHREKEQPLLPPR--- 179

Query: 204 MGNPATSSLLPPLRINIPD----HPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR--- 256
                    + PL+I+IP       H     SP PSPT TIS  NSCP SPRG  +    
Sbjct: 180 ----PLLPHISPLKISIPTMQQHEEHIRAFGSPLPSPTDTISVPNSCPASPRGAGSSGYR 235

Query: 257 --RNVSADLHMAAHYAAAHTNVVNHMSLSISQ-------------------DDSKPPYSY 295
             R+V++DL +AA YAA     V+    S+++                   D+SKPPYSY
Sbjct: 236 FGRSVTSDLQLAAEYAA---KAVSEQRRSLAEPRGGGSDQRGESAGGDSPKDESKPPYSY 292

Query: 296 AQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           AQLIVQA++SA DKQLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 293 AQLIVQAISSAPDKQLTLSGIYAHITKHYPYYRTADKGWQ 332



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/99 (61%), Positives = 70/99 (70%), Gaps = 11/99 (11%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYF+KV RSQ+EPGKGSFWR+D  SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 333 NSIRHNLSLNRYFLKVARSQDEPGKGSFWRLDSASESKLVEQAFRKRRQRGVACFRTPFG 392

Query: 163 -LSSRCT---------LRFPSTNIRLQFQSLVNESDPAP 191
            LSSR           L  PS+ ++   +SL  E  P P
Sbjct: 393 PLSSRSAPASPTHQGLLSPPSSGLQTP-ESLSREGSPIP 430


>gi|449670926|ref|XP_002157478.2| PREDICTED: uncharacterized protein LOC100202276 [Hydra
           magnipapillata]
          Length = 775

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/379 (38%), Positives = 191/379 (50%), Gaps = 108/379 (28%)

Query: 1   MSVHSGSNESDAWALLALKSTSPSPSKIQ---WKSGTAIAKLQGREFEYMVRQKRITIGR 57
           M+  S  +E  A ALL+L+       K++   W + + IAKL GREFEYMVRQ RI+IGR
Sbjct: 1   MACVSDEHEDPALALLSLRQGDSQNEKMKKPAWANNSPIAKLAGREFEYMVRQNRISIGR 60

Query: 58  NSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIK 117
           NS  GDVD+NMG SSFISR+H+EI +E P F+++  GKNGVFVDG               
Sbjct: 61  NSKLGDVDINMGHSSFISRKHLEIKYESPFFYLSTRGKNGVFVDGQ-------------- 106

Query: 118 VPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIR 177
                       F+R   GSE  L                     L ++C LRFPSTNI+
Sbjct: 107 ------------FYR--KGSERIL---------------------LKNKCVLRFPSTNIK 131

Query: 178 LQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPT 237
           + F SL+++S           S   ++ +P     + PLRI+IPD     + SSP PSP+
Sbjct: 132 VWFTSLLDKS-----------STDNLLASPPRQKSIIPLRISIPDA--DSVYSSPAPSPS 178

Query: 238 GTISAANSC---------PTSP------------------------------RGLHNRRN 258
           GTIS  NSC         PT P                               G+     
Sbjct: 179 GTISVPNSCPVSPAQQNLPTPPDSQSSSQHQSYTSELLAAASAAADDDKEDSDGIDEFCE 238

Query: 259 VSADLHMAAHYAAAHTNVVNHMSLSISQDDS--KPPYSYAQLIVQAVASAHDKQLTLSGI 316
            S+    ++  A   T+++  +S+     +S  KPPYSYAQLIVQA+ S+ DKQLTL+GI
Sbjct: 239 KSS--QDSSDEAITPTSILPPISIDGKSKNSGEKPPYSYAQLIVQAITSSADKQLTLNGI 296

Query: 317 YSFITKNYPYYRTADKGWQ 335
           Y FI KNYPYYR  DKGWQ
Sbjct: 297 YQFIMKNYPYYRINDKGWQ 315



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 83/136 (61%), Gaps = 16/136 (11%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYF+KVPRSQ+EPGKGSFWRID   E KL+EQAFR+RRQRGV CFR P+ 
Sbjct: 316 NSIRHNLSLNRYFLKVPRSQDEPGKGSFWRIDLSCETKLMEQAFRKRRQRGVACFRPPY- 374

Query: 163 LSSRCTLRFPSTNIRL----QFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRI 218
           +SSR     P+  + L    + QS  NE D          + + +   PA    L P+RI
Sbjct: 375 ISSRSAPVSPTQGVMLPPSFKPQSRNNEDDQQDLNNFEEQNDLNLTLPPA----LQPVRI 430

Query: 219 NIPDHPHTEISSSPFP 234
                  + IS+ P P
Sbjct: 431 -------SSISAQPSP 439


>gi|28204898|gb|AAH46369.1| Foxk2 protein [Xenopus laevis]
          Length = 642

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 138/314 (43%), Positives = 170/314 (54%), Gaps = 76/314 (24%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN-------- 87
           +A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF             
Sbjct: 13  VARLEGREFEYLMKKRSVTIGRNSSQGCVDVSMGHSSFISRRHLEIFIGGSGDGDDADVG 72

Query: 88  -FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
            F++ C GKNGVFVDG                                           F
Sbjct: 73  DFYLRCLGKNGVFVDG------------------------------------------VF 90

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR   G P    P  L   CT RFPSTNI++ F +L  +       Q + +    V   
Sbjct: 91  QRR---GAP----PLQLPRVCTFRFPSTNIKITFTALAIDKK-----QKLEAPESPVK-- 136

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
                 + PL I+IPD+    IS  P PSPTGTISAANSCP+SPRG  +      R +  
Sbjct: 137 -PVQPQISPLTIHIPDNIAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGFKFGRVIPP 193

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           DL      AA   N  +       +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 194 DL---IAEAAQSENDKDASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 250

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 251 KNYPYYRTADKGWQ 264



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 265 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 324

Query: 163 -LSSR 166
            LSSR
Sbjct: 325 PLSSR 329


>gi|118572326|sp|Q7ZX03.2|FOXK2_XENLA RecName: Full=Forkhead box protein K2; Short=FoxK2; AltName:
           Full=Interleukin enhancer-binding factor 1; Short=ILF1;
           Short=xFoxK1
          Length = 642

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 138/314 (43%), Positives = 170/314 (54%), Gaps = 76/314 (24%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN-------- 87
           +A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF             
Sbjct: 13  VARLEGREFEYLMKKRSVTIGRNSSQGCVDVSMGHSSFISRRHLEIFIGGSGDGDDADVG 72

Query: 88  -FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
            F++ C GKNGVFVDG                                           F
Sbjct: 73  DFYLRCLGKNGVFVDG------------------------------------------VF 90

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR   G P    P  L   CT RFPSTNI++ F +L  +       Q + +    V   
Sbjct: 91  QRR---GAP----PLQLPRVCTFRFPSTNIKITFTALAIDKK-----QKLEAPESPVK-- 136

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
                 + PL I+IPD+    IS  P PSPTGTISAANSCP+SPRG  +      R +  
Sbjct: 137 -PVQPQISPLTIHIPDNIAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGFKFGRVIPP 193

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           DL      AA   N  +       +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 194 DL---IAEAAQSENDKDASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 250

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 251 KNYPYYRTADKGWQ 264



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 265 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 324

Query: 163 -LSSR 166
            LSSR
Sbjct: 325 PLSSR 329


>gi|391333280|ref|XP_003741047.1| PREDICTED: forkhead box protein K2-like [Metaseiulus occidentalis]
          Length = 609

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/373 (38%), Positives = 180/373 (48%), Gaps = 123/373 (32%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGK 95
           +A+L GREF+Y + +KRITIGRNS+ GDVDV+MG SSFISR+H+E+F E     M CNGK
Sbjct: 33  LARLDGREFQYFMFKKRITIGRNSANGDVDVSMGNSSFISRKHLELFNEGRYIHMLCNGK 92

Query: 96  NGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVP 155
           NGVFVDG                                          AF R+   G P
Sbjct: 93  NGVFVDG------------------------------------------AFCRK---GTP 107

Query: 156 CFRAPFGLSSRCTLRFPSTNIRLQFQSLVN-----------------------ESDPAP- 191
               P  L+  CTLRFPSTNI++ F S +                         S P+P 
Sbjct: 108 ----PVKLAPTCTLRFPSTNIKIMFTSCLEPATYSRERCVLQTKDALDFELPPRSIPSPK 163

Query: 192 ------TGQSVSSSGVGVMGNPATSSLLP--------------PLRINIPDHPHTEISSS 231
                 + +   S+    +  P   +  P              PL+INIP H    I  S
Sbjct: 164 QVPSAASEELCPSAAPLQLTTPKAQTTQPNHFNNLNPNLVRFQPLKINIPTH-EDLIMPS 222

Query: 232 PFPSPTGTISAANSCPTSPRG---------------LHNRRNVSADLHMAAHYAAAHTNV 276
           P PSPTGTISAANSCPTSPR                + N  N +A  HM        +N+
Sbjct: 223 PCPSPTGTISAANSCPTSPRSGVSMSSFHTLQHRNIVTNVTNAAAHQHMVNLLQPQKSNI 282

Query: 277 VNHM--------------SLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITK 322
            + +                S++ D+ KPP+SYAQLIVQA++S  DKQLTLSGIYS+ITK
Sbjct: 283 KHEIGASSGGVGGGGGGGGTSLASDEQKPPFSYAQLIVQAISSTPDKQLTLSGIYSYITK 342

Query: 323 NYPYYRTADKGWQ 335
           NYPYYR A+KGWQ
Sbjct: 343 NYPYYRNAEKGWQ 355



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 53/60 (88%), Positives = 57/60 (95%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYF+KV RSQEEPGKGSFWRIDP SE KL+EQAFRRRRQRG+PCFRAP+G
Sbjct: 356 NSIRHNLSLNRYFMKVARSQEEPGKGSFWRIDPSSEDKLVEQAFRRRRQRGLPCFRAPYG 415


>gi|348501962|ref|XP_003438538.1| PREDICTED: forkhead box protein K2-like [Oreochromis niloticus]
          Length = 616

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/313 (43%), Positives = 176/313 (56%), Gaps = 61/313 (19%)

Query: 28  IQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN 87
           +   SG A+A+L+GREFEY++++K +TIGRNSS+G VDV+MG SSFISRRH+EIF     
Sbjct: 4   VSGMSGLAVARLEGREFEYLMKKKSVTIGRNSSQGSVDVSMGHSSFISRRHLEIF----- 58

Query: 88  FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
                 G++G                            G G F+    G     ++  F+
Sbjct: 59  ----TAGEDGT---------------------------GTGEFYLRCLGKNGVFVDGVFQ 87

Query: 148 RRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNP 207
           RR   G P    P  L   C  RFPST+I++ F +L N+   +   ++V  S +  +  P
Sbjct: 88  RR---GAP----PLQLPRMCCFRFPSTSIKITFTALSNDKKES---RNVPESPIKPV-QP 136

Query: 208 ATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL-----HNRRNVSAD 262
             S    PL INIPD+    +S  P PSPTGTISAANSCP+SPRG         R +++D
Sbjct: 137 QIS----PLTINIPDNIAHLMS--PLPSPTGTISAANSCPSSPRGAGLSSYRTSRILTSD 190

Query: 263 LHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITK 322
           L   +  +          S    +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITK
Sbjct: 191 LIGDSSQSENDKEASGEDS---PKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITK 247

Query: 323 NYPYYRTADKGWQ 335
           NYPYYRTADKGWQ
Sbjct: 248 NYPYYRTADKGWQ 260



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/65 (86%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 261 NSIRHNLSLNRYFIKVARSQEEPGKGSFWRIDPASEGKLVEQAFRKRRPRGVPCFRTPVG 320

Query: 163 -LSSR 166
            LSSR
Sbjct: 321 PLSSR 325


>gi|86577712|gb|AAI12950.1| Foxk2 protein [Xenopus laevis]
          Length = 386

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 138/314 (43%), Positives = 170/314 (54%), Gaps = 76/314 (24%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN-------- 87
           +A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF             
Sbjct: 32  VARLEGREFEYLMKKRSVTIGRNSSQGCVDVSMGHSSFISRRHLEIFIGGSGDGDDADVG 91

Query: 88  -FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
            F++ C GKNGVFVDG                                           F
Sbjct: 92  DFYLRCLGKNGVFVDG------------------------------------------VF 109

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR   G P    P  L   CT RFPSTNI++ F +L  +       Q + +    V   
Sbjct: 110 QRR---GAP----PLQLPRVCTFRFPSTNIKITFTALAIDKK-----QKLEAPESPVK-- 155

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
                 + PL I+IPD+    IS  P PSPTGTISAANSCP+SPRG  +      R +  
Sbjct: 156 -PVQPQISPLTIHIPDNIAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGFKFGRVIPP 212

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           DL   A   A   N  +       +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 213 DLIAEA---AQSENDKDASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 269

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 270 KNYPYYRTADKGWQ 283



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/65 (86%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           N IRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 284 NPIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 343

Query: 163 -LSSR 166
            LSSR
Sbjct: 344 PLSSR 348


>gi|334333320|ref|XP_001368139.2| PREDICTED: forkhead box protein K1-like [Monodelphis domestica]
          Length = 666

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/299 (43%), Positives = 170/299 (56%), Gaps = 75/299 (25%)

Query: 47  MVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIR 106
           ++RQ  +TIGRNSS+G VD+NMG SSFISRRH+++ F+ P+F++ C GKNGVFVDG    
Sbjct: 72  LMRQPAVTIGRNSSQGSVDLNMGHSSFISRRHLQLSFQEPHFYLRCLGKNGVFVDG---- 127

Query: 107 HNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSR 166
                                                 AF+RR   G P  + P     +
Sbjct: 128 --------------------------------------AFQRR---GAPALQLP----KQ 142

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP---PLRINIPDH 223
           CT RFPST I++QF SL ++ +  P+                   L P   PL+I+IP+ 
Sbjct: 143 CTFRFPSTVIKIQFTSLYHKEEAPPS---------------PLRPLYPQISPLKIHIPE- 186

Query: 224 PHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV-- 276
           P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   +   
Sbjct: 187 PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSGYRFVQNVTSDLQLAAEFAAKAASEQQ 246

Query: 277 VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 247 ADTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ 305



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 306 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 365

Query: 163 -LSSR 166
            LSSR
Sbjct: 366 PLSSR 370


>gi|74190391|dbj|BAE25880.1| unnamed protein product [Mus musculus]
          Length = 616

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/301 (44%), Positives = 171/301 (56%), Gaps = 81/301 (26%)

Query: 48  VRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRH 107
           +RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+F++ C GKNGVFVDG     
Sbjct: 1   MRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPHFYLRCLGKNGVFVDG----- 55

Query: 108 NLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRC 167
                                                AF+RR   G P  + P     +C
Sbjct: 56  -------------------------------------AFQRR---GAPALQLP----QQC 71

Query: 168 TLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRINIP 221
           T RFPST I++QF SL ++ + AP                  S L P      PL+I+IP
Sbjct: 72  TFRFPSTAIKIQFTSLYHKEE-APA-----------------SPLRPLYPQISPLKIHIP 113

Query: 222 DHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV 276
           + P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   + 
Sbjct: 114 E-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTSDLQLAAEFAAKAASE 172

Query: 277 --VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGW 334
              +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGW
Sbjct: 173 QQADASGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGW 232

Query: 335 Q 335
           Q
Sbjct: 233 Q 233



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 234 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 293

Query: 163 -LSSR 166
            LSSR
Sbjct: 294 PLSSR 298


>gi|119607697|gb|EAW87291.1| forkhead box K1 [Homo sapiens]
          Length = 616

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/301 (43%), Positives = 171/301 (56%), Gaps = 81/301 (26%)

Query: 48  VRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRH 107
           +RQ  +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+F++ C GKNGVFVDG     
Sbjct: 1   MRQPSVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPHFYLRCLGKNGVFVDG----- 55

Query: 108 NLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRC 167
                                                AF+RR   G P  + P     +C
Sbjct: 56  -------------------------------------AFQRR---GAPALQLP----KQC 71

Query: 168 TLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRINIP 221
           T RFPST I++QF SL ++ + AP                  S L P      PL+I+IP
Sbjct: 72  TFRFPSTAIKIQFTSLYHKEE-APA-----------------SPLRPLYPQISPLKIHIP 113

Query: 222 DHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV 276
           + P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   + 
Sbjct: 114 E-PDLRSMVSPVPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTSDLQLAAEFAAKAASE 172

Query: 277 --VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGW 334
              +       +D+SKPP+SYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGW
Sbjct: 173 QQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGW 232

Query: 335 Q 335
           Q
Sbjct: 233 Q 233



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 234 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 293

Query: 163 -LSSR 166
            LSSR
Sbjct: 294 PLSSR 298


>gi|308736992|ref|NP_001184186.1| forkhead box protein K2 [Danio rerio]
          Length = 544

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 133/310 (42%), Positives = 174/310 (56%), Gaps = 68/310 (21%)

Query: 32  SGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMT 91
           +G  +A+L+GREFEY+++++ +T+GRNSS+G VDV+MG SSFISRRH+EIF         
Sbjct: 2   AGPVVARLEGREFEYLMKKRSVTVGRNSSQGSVDVSMGHSSFISRRHLEIF--------- 52

Query: 92  CNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ 151
                                        S  E G G F+    G     ++ AF+RR  
Sbjct: 53  -----------------------------SAGEDGAGEFYLRCLGKNGVFVDGAFQRR-- 81

Query: 152 RGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSS 211
            G P    P  L   CTLRFPSTNI++ F +L ++               G +  P  + 
Sbjct: 82  -GAP----PLQLPRACTLRFPSTNIKISFTALCSDQ----------RECRGALEVPVKAQ 126

Query: 212 LLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL-----HNRRNVSADLHMA 266
           + P L I+IP++  T + S P PSPTGTISAANSCP+SPRG         R ++A+L   
Sbjct: 127 ISP-LTISIPEN-ITHLRS-PLPSPTGTISAANSCPSSPRGAGLSSYRMGRGLTAELI-- 181

Query: 267 AHYAAAHTNVVNHMSLSIS-QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYP 325
                + + +    S   S +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYP
Sbjct: 182 --NENSQSEIDKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYP 239

Query: 326 YYRTADKGWQ 335
           YYRTADKGWQ
Sbjct: 240 YYRTADKGWQ 249



 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/65 (84%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQEEPGKGSFWRIDP SE KL++QAFR+RR RGVPCFR P G
Sbjct: 250 NSIRHNLSLNRYFIKVARSQEEPGKGSFWRIDPSSEGKLMDQAFRKRRPRGVPCFRTPLG 309

Query: 163 -LSSR 166
            LSSR
Sbjct: 310 PLSSR 314


>gi|350581381|ref|XP_003481025.1| PREDICTED: forkhead box protein K1-like [Sus scrofa]
          Length = 674

 Score =  210 bits (534), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 137/332 (41%), Positives = 180/332 (54%), Gaps = 86/332 (25%)

Query: 22  SPSPSKIQWKSGTAIAKLQG-----REFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISR 76
           SP P   +  +G   A+  G        ++++ Q  + I RNSS+G VD++MGLSSFISR
Sbjct: 24  SPRPEAAKQGTGLGPARRAGLFKPTTHSKFIMSQPSVPISRNSSQGSVDLSMGLSSFISR 83

Query: 77  RHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPG 136
           RH+++ F+ P+F++ C GKNGVFVDG                                  
Sbjct: 84  RHLQLSFQEPHFYLRCLGKNGVFVDG---------------------------------- 109

Query: 137 SEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSV 196
                   AF+RR   G P  + P     +CTLRFPST I++QF SL ++ + AP     
Sbjct: 110 --------AFQRR---GAPALQLP----KQCTLRFPSTAIKIQFTSLYHQEE-APA---- 149

Query: 197 SSSGVGVMGNPATSSLLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSP 250
                        S L P      PL+I+IP+ P      SP PSPTGTIS  NSCP SP
Sbjct: 150 -------------SPLRPLYPQISPLKIHIPE-PDLRSLVSPVPSPTGTISVPNSCPASP 195

Query: 251 RGLHNR-----RNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAV 303
           RG  +      +NV++DL +AA +AA   +            +D+SKPPYSYAQLIVQA+
Sbjct: 196 RGAGSSGYRFVQNVTSDLQLAAEFAAKAASEQQAEASGGDSPKDESKPPYSYAQLIVQAI 255

Query: 304 ASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 256 SSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ 287



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 59/65 (90%), Gaps = 2/65 (3%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRG  CFR PFG
Sbjct: 288 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGT-CFRTPFG 346

Query: 163 -LSSR 166
            LSSR
Sbjct: 347 PLSSR 351


>gi|444729494|gb|ELW69907.1| Forkhead box protein K1 [Tupaia chinensis]
          Length = 649

 Score =  210 bits (534), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 132/298 (44%), Positives = 169/298 (56%), Gaps = 81/298 (27%)

Query: 51  KRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLS 110
           K +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+F++ C GKNGVFVDG        
Sbjct: 49  KHVTIGRNSSQGSVDLSMGLSSFISRRHLQLSFQEPHFYLRCLGKNGVFVDG-------- 100

Query: 111 LNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLR 170
                                             AF+RR   G P  + P     +CT R
Sbjct: 101 ----------------------------------AFQRR---GAPALQLP----KQCTFR 119

Query: 171 FPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRINIPDHP 224
           FPST I++QF SL ++ + AP                  S L P      PL+I+IP+ P
Sbjct: 120 FPSTAIKIQFTSLYHKEE-APA-----------------SPLRPLYPQISPLKIHIPE-P 160

Query: 225 HTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV--V 277
                 SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   +    
Sbjct: 161 DLRSMVSPVPSPTGTISVPNSCPASPRGAGSSGYRFVQNVTSDLQLAAEFAAKAASEQQA 220

Query: 278 NHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 221 DTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ 278



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/89 (68%), Positives = 65/89 (73%), Gaps = 8/89 (8%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 279 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 338

Query: 163 LSSRCTLRFPSTNIRLQFQSLVNESDPAP 191
             S   L+ P        + L  E  P P
Sbjct: 339 PLSSSGLQTP--------ECLSREGSPIP 359


>gi|432925247|ref|XP_004080716.1| PREDICTED: forkhead box protein K2-like [Oryzias latipes]
          Length = 591

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/308 (43%), Positives = 173/308 (56%), Gaps = 63/308 (20%)

Query: 33  GTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTC 92
           G+A+A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF          
Sbjct: 9   GSAVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIF---------T 59

Query: 93  NGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
            G++GV                             G F+    G     ++  F+RR   
Sbjct: 60  AGEDGV-----------------------------GEFYLRCLGKNGVFVDGVFQRR--- 87

Query: 153 GVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSL 212
           G P    P  L   C  RFPST+I++ F +L N     P  ++V  S V  +  P  S  
Sbjct: 88  GAP----PLQLPRMCCFRFPSTSIKITFTAL-NSDKKEP--RNVPESPVKPV-QPQIS-- 137

Query: 213 LPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL-----HNRRNVSADLHMAA 267
             PL INIPD+    +S  P PSPTGT+SAANSCP+SPRG         R +++DL +  
Sbjct: 138 --PLTINIPDNIAHLMS--PLPSPTGTLSAANSCPSSPRGAGLSSYRATRGLTSDLIVDN 193

Query: 268 HYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYY 327
                        S    +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYY
Sbjct: 194 SQTENDKEASGEDS---PKDDSKPPYSYAQLIVQAITMATDKQLTLNGIYTHITKNYPYY 250

Query: 328 RTADKGWQ 335
           RTADKGWQ
Sbjct: 251 RTADKGWQ 258



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 259 NSIRHNLSLNRYFIKVARSQEEPGKGSFWRIDPASEAKLIEQAFRKRRPRGVPCFRTPLG 318

Query: 163 -LSSR 166
            LSSR
Sbjct: 319 PLSSR 323


>gi|281343128|gb|EFB18712.1| hypothetical protein PANDA_004585 [Ailuropoda melanoleuca]
          Length = 606

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/296 (44%), Positives = 167/296 (56%), Gaps = 81/296 (27%)

Query: 53  ITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLN 112
           +TIGRNSS+G VD++MGLSSFISRRH+++ F+ P+F++ C GKNGVFVDG          
Sbjct: 1   VTIGRNSSQGSVDLSMGLSSFISRRHLQLTFQEPHFYLRCLGKNGVFVDG---------- 50

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                           AF+RR   G P  + P     +CT RFP
Sbjct: 51  --------------------------------AFQRR---GAPALQLP----KQCTFRFP 71

Query: 173 STNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRINIPDHPHT 226
           ST I++QF SL  + + AP                  S L P      PL+I+IP+ P  
Sbjct: 72  STAIKIQFTSLYRQEE-APA-----------------SPLRPLYPQISPLKIHIPE-PDL 112

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV--VNH 279
               SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   +    + 
Sbjct: 113 RSLVSPVPSPTGTISVPNSCPASPRGAGSSGYRFVQNVTSDLQLAAEFAAKAASEQQADT 172

Query: 280 MSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
                 +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 173 SGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ 228



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 229 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 288

Query: 163 -LSSR 166
            LSSR
Sbjct: 289 PLSSR 293


>gi|189517674|ref|XP_001922856.1| PREDICTED: forkhead box protein K2 isoform 1 [Danio rerio]
          Length = 597

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 130/305 (42%), Positives = 168/305 (55%), Gaps = 55/305 (18%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNG 94
           A+A+L+GREFEY+++++ +T+GRNSS+G VDV+MG SSFISRRH+EIF        T   
Sbjct: 3   AMARLEGREFEYVMKKRSVTVGRNSSQGSVDVSMGHSSFISRRHLEIF--------TAAA 54

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           ++                        +   PG G F+    G     ++  F RR   G 
Sbjct: 55  ED------------------------TGSGPGGGDFYLRCLGKNGVFVDGVFLRR---GA 87

Query: 155 PCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP 214
           P    P  L   CT RFPSTNI++ F +L +        +S            A    + 
Sbjct: 88  P----PLQLPRVCTFRFPSTNIKITFTALASVKREKREPESPVK---------AVQPQIS 134

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL----HNRRNVSADLHMAAHYA 270
           PL INIPD+    +S  P PSPTGTISAANSCP+SPRG     +    +  DL +    +
Sbjct: 135 PLTINIPDNIAHLMS--PLPSPTGTISAANSCPSSPRGAGSSGYRLGRIVPDLQLMNDNS 192

Query: 271 AAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTA 330
            +  +       S  +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTA
Sbjct: 193 QSENDKETSEGDS-PKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTA 251

Query: 331 DKGWQ 335
           DKGWQ
Sbjct: 252 DKGWQ 256



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 257 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPSSEGKLVEQAFRKRRPRGVPCFRTPLG 316

Query: 163 -LSSR 166
            LSSR
Sbjct: 317 PLSSR 321


>gi|189517676|ref|XP_001922858.1| PREDICTED: forkhead box protein K2 isoform 2 [Danio rerio]
          Length = 596

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 130/305 (42%), Positives = 168/305 (55%), Gaps = 55/305 (18%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNG 94
           A+A+L+GREFEY+++++ +T+GRNSS+G VDV+MG SSFISRRH+EIF        T   
Sbjct: 3   AMARLEGREFEYVMKKRSVTVGRNSSQGSVDVSMGHSSFISRRHLEIF--------TAAA 54

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           ++                        +   PG G F+    G     ++  F RR   G 
Sbjct: 55  ED------------------------TGSGPGGGDFYLRCLGKNGVFVDGVFLRR---GA 87

Query: 155 PCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP 214
           P    P  L   CT RFPSTNI++ F +L +        +S            A    + 
Sbjct: 88  P----PLQLPRVCTFRFPSTNIKITFTALASVKREKREPESPVK---------AVQPQIS 134

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL----HNRRNVSADLHMAAHYA 270
           PL INIPD+    +S  P PSPTGTISAANSCP+SPRG     +    +  DL +    +
Sbjct: 135 PLTINIPDNIAHLMS--PLPSPTGTISAANSCPSSPRGAGSSGYRLGRIVPDLQLMNDNS 192

Query: 271 AAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTA 330
            +  +       S  +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTA
Sbjct: 193 QSENDKETSEGDS-PKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTA 251

Query: 331 DKGWQ 335
           DKGWQ
Sbjct: 252 DKGWQ 256



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 257 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPSSEGKLVEQAFRKRRPRGVPCFRTPLG 316

Query: 163 -LSSR 166
            LSSR
Sbjct: 317 PLSSR 321


>gi|194378860|dbj|BAG63595.1| unnamed protein product [Homo sapiens]
          Length = 583

 Score =  207 bits (527), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/301 (43%), Positives = 170/301 (56%), Gaps = 81/301 (26%)

Query: 48  VRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRH 107
           +RQ  +TIGRNSS+G VD++M LSSFISRRH+++ F+ P+F++ C GKNGVFVDG     
Sbjct: 1   MRQPSVTIGRNSSQGSVDLSMSLSSFISRRHLQLSFQEPHFYLRCLGKNGVFVDG----- 55

Query: 108 NLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRC 167
                                                AF+RR   G P  + P     +C
Sbjct: 56  -------------------------------------AFQRR---GAPALQLP----KQC 71

Query: 168 TLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRINIP 221
           T RFPST I++QF SL ++ + AP                  S L P      PL+I+IP
Sbjct: 72  TFRFPSTAIKIQFTSLYHKEE-APA-----------------SPLRPLYPQISPLKIHIP 113

Query: 222 DHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV 276
           + P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   + 
Sbjct: 114 E-PDLRSMVSPVPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTSDLQLAAEFAAKAASE 172

Query: 277 --VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGW 334
              +       +D+SKPP+SYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGW
Sbjct: 173 QQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGW 232

Query: 335 Q 335
           Q
Sbjct: 233 Q 233



 Score =  124 bits (310), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQ FR+RRQRGV CFR PFG
Sbjct: 234 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQGFRKRRQRGVSCFRTPFG 293

Query: 163 -LSSR 166
            LSSR
Sbjct: 294 PLSSR 298


>gi|328705759|ref|XP_003242897.1| PREDICTED: hypothetical protein LOC100165903 [Acyrthosiphon pisum]
          Length = 739

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/270 (44%), Positives = 146/270 (54%), Gaps = 68/270 (25%)

Query: 13  WALLALKSTSPSPSKIQWKSGT----AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNM 68
           W L ALKS   SP+ +QW         IAKL+GRE EY++RQKRI IGRNSS+G VDVNM
Sbjct: 6   WTLHALKSMPGSPTNVQWAPDQDVTGVIAKLEGRELEYLIRQKRIVIGRNSSKGQVDVNM 65

Query: 69  GLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKG 128
           G SSFISRRH+++ +EHPNF++TC+GKNGVFVDG                          
Sbjct: 66  GHSSFISRRHLDVLYEHPNFYLTCHGKNGVFVDG-------------------------- 99

Query: 129 SFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESD 188
                            F+R   +G P  + P     RC +RFPST IRL F SL++E  
Sbjct: 100 ----------------VFQR---KGAPALQLP----RRCLMRFPSTTIRLVFYSLIDEMA 136

Query: 189 PAPTGQSVSSSGVGVMGNPATS---SLLPPLRINIPDHPHTEISS----------SPFPS 235
           P P  Q   ++ +     P  +   S   PL INIP     + SS          SPFPS
Sbjct: 137 PPPVLQ--QNTFIQTQTRPIATPSRSYASPLSINIPPQVIKQESSTYLSKENRFMSPFPS 194

Query: 236 PTGTISAANSCPTSPRGLHNRRNVSADLHM 265
           PTGT+SAANSCPTSPRG HNR  +  DL M
Sbjct: 195 PTGTLSAANSCPTSPRGGHNRHTLGPDLQM 224



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 59/73 (80%), Gaps = 3/73 (4%)

Query: 89  FMTCNGKNGVFVDG---NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQA 145
           ++T N     FVD    NSIRHNLSLNRYFIKVPRSQEEPGKG+FWRIDP SE KLIEQA
Sbjct: 362 YITKNYPYYRFVDKGWQNSIRHNLSLNRYFIKVPRSQEEPGKGAFWRIDPSSEQKLIEQA 421

Query: 146 FRRRRQRGVPCFR 158
           FRRRR RGVP FR
Sbjct: 422 FRRRRIRGVPSFR 434



 Score = 97.8 bits (242), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 44/51 (86%), Positives = 48/51 (94%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S+D+SKPPYSYAQLIVQAVASA D+QLTLSGIYS+ITKNYPYYR  DKGWQ
Sbjct: 328 SKDESKPPYSYAQLIVQAVASASDRQLTLSGIYSYITKNYPYYRFVDKGWQ 378


>gi|348558316|ref|XP_003464964.1| PREDICTED: forkhead box protein K2-like [Cavia porcellus]
          Length = 690

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/348 (39%), Positives = 176/348 (50%), Gaps = 97/348 (27%)

Query: 25  PSKIQWKSGTAIAKLQGR-------------EFEYMVRQKRITIGRNSSRGDVDVNMGLS 71
           P++++ ++G   A ++ R              FEY+++++ +TIGRNSS+G VDV+MG S
Sbjct: 51  PARVKARAGVPHAAVRPRLRARRPDKDAAPPRFEYLMKKRSVTIGRNSSQGSVDVSMGHS 110

Query: 72  SFISRRHIEIFF-------------EHP------NFFMTCNGKNGVFVDGNSIRHNLSLN 112
           SFISRRH+EIF                P      +F++ C GKNGVFVDG          
Sbjct: 111 SFISRRHLEIFTPPGGGHGAAAPEPAQPRPDTGGDFYLRCLGKNGVFVDG---------- 160

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                            F+RR   G P    P  L   CT RFP
Sbjct: 161 --------------------------------VFQRR---GAP----PLQLPRVCTFRFP 181

Query: 173 STNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSP 232
           STNI++ F +L +E       + + +    V         + PL INIPD     +S  P
Sbjct: 182 STNIKITFTALSSEKR-----EKLEAPESPVK---PVQPHISPLTINIPDTMAHLLS--P 231

Query: 233 FPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQD 287
            PSPTGTISAANSCP+SPRG  +      R + +DL +    +    N          +D
Sbjct: 232 LPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPSDLSLMTDNSQPE-NEKEASGGDSPKD 290

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           DSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 291 DSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 338



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/106 (64%), Positives = 72/106 (67%), Gaps = 9/106 (8%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 339 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 398

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAPTGQSVSSS 199
            LSSR     P+    L          +SL  E  PAP     S+S
Sbjct: 399 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAPLESEPSAS 444


>gi|417411793|gb|JAA52322.1| Putative forkhead/hnf-3-related transcription factor, partial
           [Desmodus rotundus]
          Length = 587

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/308 (41%), Positives = 162/308 (52%), Gaps = 83/308 (26%)

Query: 53  ITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHP--------------------NFFMTC 92
           +TIGRNSS+G VDV+MG SSFISRRH+EIF                        +F++ C
Sbjct: 1   VTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGGHGGAAPEPSAQPGPDSGGDFYLRC 60

Query: 93  NGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
            GKNGVFVDG                                           F+RR   
Sbjct: 61  LGKNGVFVDG------------------------------------------VFQRR--- 75

Query: 153 GVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSL 212
           G P    P  L   CT RFPSTNI++ F +L + S+     ++ +S G      PA + +
Sbjct: 76  GAP----PLQLPRVCTFRFPSTNIKITFTALSSSSEKREPPEAPASPG-----KPAQAHV 126

Query: 213 LPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAA 267
            P L I+IPD     +S  P PSPTGTISAANSCP+SPRG  +      R + +DL + A
Sbjct: 127 SP-LTISIPDSMAHLLS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVMPSDLSLMA 183

Query: 268 HYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYY 327
             +   +   +       +DDSKPPYSYAQLIVQA+  A D+QLTL+GIY+ ITKNYPYY
Sbjct: 184 DNSQPESEK-DASGGDSPKDDSKPPYSYAQLIVQAITMAPDRQLTLNGIYTHITKNYPYY 242

Query: 328 RTADKGWQ 335
           RTADKGWQ
Sbjct: 243 RTADKGWQ 250



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/98 (65%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWR+DP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 251 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRVDPASESKLVEQAFRKRRPRGVPCFRTPLG 310

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 311 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 348


>gi|332265375|ref|XP_003281699.1| PREDICTED: forkhead box protein K2 [Nomascus leucogenys]
          Length = 668

 Score =  193 bits (491), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 163/336 (48%), Gaps = 95/336 (28%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFF----------- 83
           A+A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF            
Sbjct: 36  AVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTPPGGGGGHGGA 95

Query: 84  --EHP----------NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFW 131
             E P          +F++ C GKNGVFVDG                             
Sbjct: 96  APELPPAQPRPDAGGDFYLRCLGKNGVFVDG----------------------------- 126

Query: 132 RIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAP 191
                         F+RR   G P    P  L   CT RFPSTNI++ F +L +E     
Sbjct: 127 -------------VFQRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR--- 163

Query: 192 TGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTI--------SAA 243
             Q  S S V      A    + PL INIPD     I  SP PSPTGTI           
Sbjct: 164 EKQEASESPVK-----AVQPHISPLTINIPDTMAHLI--SPLPSPTGTIREPPVALKEPG 216

Query: 244 NSCPTSPRGLHN----RRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLI 299
              P   RG       R    A + +     A        + L    DDSKPPYSYAQLI
Sbjct: 217 PRMPACQRGTQQPGCLRPQGEASMGLFVGQGAPPRG-RQGLLLDGYLDDSKPPYSYAQLI 275

Query: 300 VQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           VQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 276 VQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 311



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 312 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 371

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 372 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 409


>gi|118343790|ref|NP_001071715.1| transcription factor protein [Ciona intestinalis]
 gi|70569622|dbj|BAE06445.1| transcription factor protein [Ciona intestinalis]
          Length = 614

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 133/334 (39%), Positives = 170/334 (50%), Gaps = 87/334 (26%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNG 94
           AI K+ G +FEY + + ++ IGRNSS G VDVN+GLSS++SR+H++I +    FF+ C G
Sbjct: 37  AIGKISGTDFEYWICKDKVVIGRNSSHGKVDVNIGLSSYVSRKHLQITYTRNRFFLQCIG 96

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           KNGVFVDG                           F R++                    
Sbjct: 97  KNGVFVDGQ--------------------------FQRLN-------------------- 110

Query: 155 PCFRAPFGLSSRCTLRFPSTNIRLQF---------------------QSLVNESDPAPTG 193
                PF L + C +RFPST+I+L F                     Q + + SD     
Sbjct: 111 ---AEPFPLDNACIIRFPSTSIQLAFSPFPPDTNRNGSTQSNKDTPPQDIASASDKKVPE 167

Query: 194 QSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEIS-------SSPFPSPTGTISAANSC 246
             +  S + V GN    +   P  IN   H    +        S+P PSPTGTISA NSC
Sbjct: 168 LPIKKSPIYVPGNLGKET---PPNINPNQHFKYVLPRDVRGFLSAP-PSPTGTISAVNSC 223

Query: 247 PTSPRGLHNRR---NVSADLHMAAHYAAAHTNVVNHMSLSISQD--DSKPPYSYAQLIVQ 301
           P+SPR  H R    NV+ +L+ AA   AA    +     S  QD  DSKPPYSYAQLI+Q
Sbjct: 224 PSSPRSSHMRNQNNNVTENLNAAATAIAASVGDIPSDKTS-QQDPVDSKPPYSYAQLIIQ 282

Query: 302 AVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           A++SA  +QLTLSGIY+ ITKNYPYYRTADKGWQ
Sbjct: 283 AISSAPHRQLTLSGIYAHITKNYPYYRTADKGWQ 316



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 47/59 (79%), Positives = 53/59 (89%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF 161
           NSIRHNLSLNRYF+KVPRSQEE GKGSFW++DP SE KL+EQA+R+RRQR VPCF AP 
Sbjct: 317 NSIRHNLSLNRYFVKVPRSQEESGKGSFWKVDPASERKLVEQAWRKRRQRSVPCFCAPL 375


>gi|355689109|gb|AER98721.1| forkhead box K1 [Mustela putorius furo]
          Length = 367

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/280 (43%), Positives = 157/280 (56%), Gaps = 71/280 (25%)

Query: 64  VDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQE 123
           VD++MGLSSFISRRH+++ F+ P+F++ C GKNGVFVDG                     
Sbjct: 2   VDLSMGLSSFISRRHLQLTFQEPHFYLRCLGKNGVFVDG--------------------- 40

Query: 124 EPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSL 183
                                AF+RR   G P  + P     +CT RFPST I++QF SL
Sbjct: 41  ---------------------AFQRR---GAPALQLP----KQCTFRFPSTAIKIQFTSL 72

Query: 184 VN-ESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISA 242
              E  PA   + +          P  S    PL+I+IP+ P      SP PSPTGTIS 
Sbjct: 73  YRPEEAPASPLRPL---------YPQIS----PLKIHIPE-PDLRSLVSPVPSPTGTISV 118

Query: 243 ANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSY 295
            NSCP SPRG  +      +NV++DL +AA +AA   +    +       +D+SKPPYSY
Sbjct: 119 PNSCPASPRGAGSSGYRFVQNVTSDLQLAAEFAAKAASEQQADTSGGDSPKDESKPPYSY 178

Query: 296 AQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           AQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 179 AQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ 218



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 219 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 278

Query: 163 -LSSR 166
            LSSR
Sbjct: 279 PLSSR 283


>gi|397498089|ref|XP_003819825.1| PREDICTED: forkhead box protein K1 [Pan paniscus]
          Length = 637

 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/276 (41%), Positives = 149/276 (53%), Gaps = 81/276 (29%)

Query: 73  FISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWR 132
           FISRRH+++ F+ P+F++ C GKNGVFVDG                              
Sbjct: 47  FISRRHLQLSFQEPHFYLRCLGKNGVFVDG------------------------------ 76

Query: 133 IDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPT 192
                       AF+RR   G P  + P     +CT RFPST I++QF SL ++ + AP 
Sbjct: 77  ------------AFQRR---GAPALQLP----KQCTFRFPSTAIKIQFTSLYHKEE-APA 116

Query: 193 GQSVSSSGVGVMGNPATSSLLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSC 246
                            S L P      PL+I+IP+ P      SP PSPTGTIS  NSC
Sbjct: 117 -----------------SPLRPLYPQISPLKIHIPE-PDLRSMVSPVPSPTGTISVPNSC 158

Query: 247 PTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLI 299
           P SPRG  +      +NV++DL +AA +AA   +    +       +D+SKPP+SYAQLI
Sbjct: 159 PASPRGAGSSSYRFVQNVTSDLQLAAEFAAKAASEQQADTSGGDSPKDESKPPFSYAQLI 218

Query: 300 VQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           VQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 219 VQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ 254



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 255 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 314

Query: 163 -LSSR 166
            LSSR
Sbjct: 315 PLSSR 319


>gi|283464175|gb|ADB22671.1| fork-head box K transcription factor [Saccoglossus kowalevskii]
          Length = 512

 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/253 (45%), Positives = 143/253 (56%), Gaps = 64/253 (25%)

Query: 87  NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NFF+ C+GKNG+FVDG                                           F
Sbjct: 1   NFFLHCSGKNGIFVDG------------------------------------------IF 18

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR          P  L   C LRFPSTNI++ FQ+L++E + AP    + S        
Sbjct: 19  QRRGAN-------PLQLPRACVLRFPSTNIKIMFQALIDEHN-APQNSGIPS-------- 62

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRG-LHNRRNVSADLHM 265
           P     +  LRINIPD  + +  +S FPSPTGTISAANSCP+SPRG   +RRNV+++L  
Sbjct: 63  PPKKKQMTELRINIPDS-NADFGNS-FPSPTGTISAANSCPSSPRGGTGHRRNVASELQA 120

Query: 266 AAHYAAAHT--NVVNHMSLSIS-QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITK 322
           AA+ AAA    +  +H S + S +DDSKPPYSYAQLIVQA+ SA DKQLTLSGIY  I K
Sbjct: 121 AAYAAAAVAAEDKESHSSSNESPKDDSKPPYSYAQLIVQAIISAQDKQLTLSGIYCHIMK 180

Query: 323 NYPYYRTADKGWQ 335
           NYPYYR+ADKGWQ
Sbjct: 181 NYPYYRSADKGWQ 193



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 71/99 (71%), Gaps = 8/99 (8%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCF-RAPF 161
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWR+DP SE KL EQAFRRRRQRGVPCF R PF
Sbjct: 194 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRLDPASEAKLTEQAFRRRRQRGVPCFSRTPF 253

Query: 162 -GLSSRCTLRFPSTNIRLQF------QSLVNESDPAPTG 193
            G+SSR     P+ + +          +L  E  P P+G
Sbjct: 254 GGISSRSAPASPTHSSQYHHMGTFTPDNLSREGSPVPSG 292


>gi|449479086|ref|XP_002187621.2| PREDICTED: forkhead box protein K2, partial [Taeniopygia guttata]
          Length = 579

 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 142/306 (46%), Gaps = 108/306 (35%)

Query: 54  TIGRNSSRGDVDVNMGLSSFISRRHIEIF------------------------FEHPNFF 89
           TIGRNSS+G VDV+MG SSFISRRH+EIF                            +F+
Sbjct: 1   TIGRNSSQGSVDVSMGHSSFISRRHLEIFTAAPPPPPAGADGPPPPPQGDPAGGAGGDFY 60

Query: 90  MTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           + C GKNGVFVDG                                           F+RR
Sbjct: 61  LRCLGKNGVFVDG------------------------------------------VFQRR 78

Query: 150 RQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPAT 209
              G P    P  L   CT RFPSTNI++ F +L NE       Q    S V  +  P  
Sbjct: 79  ---GAP----PLQLPRVCTFRFPSTNIKITFTALSNEKR---EKQEAPESPVKPV-QPQI 127

Query: 210 SSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHY 269
           S    PL INIPD+    IS  P PSPTGTI  A++  +      N +  S         
Sbjct: 128 S----PLTINIPDNMAHLIS--PLPSPTGTIRMADNSQS-----ENDKEASGG------- 169

Query: 270 AAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT 329
                           +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRT
Sbjct: 170 -------------DSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRT 216

Query: 330 ADKGWQ 335
           ADKGWQ
Sbjct: 217 ADKGWQ 222



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/117 (59%), Positives = 79/117 (67%), Gaps = 6/117 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 223 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 282

Query: 163 -LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRI 218
            LSSR     P+ +  L   S   +     T +S+S  G  V   P  S++ P L +
Sbjct: 283 PLSSRSAPASPNHSGVLSAHSSGVQ-----TPESLSREGSPVPMEPEPSTIQPKLAV 334


>gi|74219582|dbj|BAE29561.1| unnamed protein product [Mus musculus]
          Length = 513

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/286 (41%), Positives = 139/286 (48%), Gaps = 84/286 (29%)

Query: 74  ISRRHIEIFF-------------EHP------NFFMTCNGKNGVFVDGNSIRHNLSLNRY 114
           ISRRH+EIF                P      +F+M C GKNGVFVDG            
Sbjct: 1   ISRRHLEIFTPPGGGHSAAAPEPAQPRPDAGGDFYMRCLGKNGVFVDG------------ 48

Query: 115 FIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPST 174
                                          F+RR   G P    P  L   CT RFPST
Sbjct: 49  ------------------------------VFQRR---GAP----PLQLPRVCTFRFPST 71

Query: 175 NIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFP 234
           NI++ F +L +E       Q    S V  +  P  S    PL INIPD     IS  P P
Sbjct: 72  NIKITFTALSSEKR---EKQEAPESPVKPV-QPHIS----PLTINIPDTMAHLIS--PLP 121

Query: 235 SPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDS 289
           SPTGTISAANSCP+SPRG  +      R + +DL + A  +    N          +DDS
Sbjct: 122 SPTGTISAANSCPSSPRGAGSSGYKVGRVMPSDLSLMADNSQPE-NEKEASGGDSPKDDS 180

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 181 KPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 226



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 227 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 286

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 287 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 324


>gi|380797013|gb|AFE70382.1| forkhead box protein K2, partial [Macaca mulatta]
          Length = 554

 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/254 (43%), Positives = 131/254 (51%), Gaps = 65/254 (25%)

Query: 87  NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           +F++ C GKNGVFVDG                                           F
Sbjct: 4   DFYLRCLGKNGVFVDG------------------------------------------VF 21

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR   G P    P  L   CT RFPSTNI++ F +L +E       Q +S S V     
Sbjct: 22  QRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQELSESPVK---- 67

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
            A    + PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +      R + +
Sbjct: 68  -AVQPHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPS 124

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 125 DLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 183

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 184 KNYPYYRTADKGWQ 197



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 198 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 257

Query: 163 -LSSR 166
            LSSR
Sbjct: 258 PLSSR 262


>gi|297273922|ref|XP_001114082.2| PREDICTED: forkhead box protein K2-like, partial [Macaca mulatta]
          Length = 617

 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/254 (43%), Positives = 131/254 (51%), Gaps = 65/254 (25%)

Query: 87  NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           +F++ C GKNGVFVDG                                           F
Sbjct: 11  DFYLRCLGKNGVFVDG------------------------------------------VF 28

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR   G P    P  L   CT RFPSTNI++ F +L +E       Q +S S V     
Sbjct: 29  QRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQELSESPVK---- 74

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
            A    + PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +      R + +
Sbjct: 75  -AVQPHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPS 131

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 132 DLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 190

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 191 KNYPYYRTADKGWQ 204



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 205 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 264

Query: 163 -LSSR 166
            LSSR
Sbjct: 265 PLSSR 269


>gi|1388160|gb|AAB02820.1| interleukin enhancer binding factor 1 [Homo sapiens]
          Length = 655

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/254 (43%), Positives = 130/254 (51%), Gaps = 65/254 (25%)

Query: 87  NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           +F++ C GKNGVFVDG                                           F
Sbjct: 105 DFYLRCLGKNGVFVDG------------------------------------------VF 122

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR   G P    P  L   CT RFPSTNI++ F +L +E       Q  S S V     
Sbjct: 123 QRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQEASESPVK---- 168

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
            A    + PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +      R + +
Sbjct: 169 -AVQPHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPS 225

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 226 DLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 284

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 285 KNYPYYRTADKGWQ 298



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 299 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 358

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 359 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 396


>gi|397475178|ref|XP_003809023.1| PREDICTED: forkhead box protein K2, partial [Pan paniscus]
          Length = 528

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/254 (43%), Positives = 130/254 (51%), Gaps = 65/254 (25%)

Query: 87  NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           +F++ C GKNGVFVDG                                           F
Sbjct: 24  DFYLRCLGKNGVFVDG------------------------------------------VF 41

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR   G P    P  L   CT RFPSTNI++ F +L +E       Q  S S V     
Sbjct: 42  QRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQEASESPVK---- 87

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
            A    + PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +      R + +
Sbjct: 88  -AVQPHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPS 144

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 145 DLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 203

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 204 KNYPYYRTADKGWQ 217



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 218 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 277

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 278 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 315


>gi|1388162|gb|AAB02821.1| interleukin enhancer binding factor 2 [Homo sapiens]
          Length = 609

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/254 (43%), Positives = 130/254 (51%), Gaps = 65/254 (25%)

Query: 87  NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           +F++ C GKNGVFVDG                                           F
Sbjct: 105 DFYLRCLGKNGVFVDG------------------------------------------VF 122

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR   G P    P  L   CT RFPSTNI++ F +L +E       Q  S S V     
Sbjct: 123 QRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQEASESPVK---- 168

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
            A    + PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +      R + +
Sbjct: 169 -AVQPHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPS 225

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 226 DLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 284

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 285 KNYPYYRTADKGWQ 298



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 299 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 358

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 359 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 396


>gi|358417560|ref|XP_610873.4| PREDICTED: forkhead box protein K2, partial [Bos taurus]
          Length = 561

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/254 (42%), Positives = 130/254 (51%), Gaps = 65/254 (25%)

Query: 87  NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           +F++ C GKNGVFVDG                                           F
Sbjct: 11  DFYLRCLGKNGVFVDG------------------------------------------VF 28

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR   G P    P  L   CT RFPSTNI++ F +L +E       Q    S V  +  
Sbjct: 29  QRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV-- 76

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
               + + PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +      R + +
Sbjct: 77  ---QAHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPS 131

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 132 DLNLMADSSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 190

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 191 KNYPYYRTADKGWQ 204



 Score =  127 bits (319), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 205 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 264

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 265 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 302


>gi|1388164|gb|AAB02822.1| interleukin enhancer binding factor 3 [Homo sapiens]
          Length = 323

 Score =  161 bits (407), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/259 (42%), Positives = 132/259 (50%), Gaps = 65/259 (25%)

Query: 87  NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           +F++ C GKNGVFVDG                                           F
Sbjct: 105 DFYLRCLGKNGVFVDG------------------------------------------VF 122

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR   G P    P  L   CT RFPSTNI++ F +L +E       Q  S S V     
Sbjct: 123 QRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQEASESPVK---- 168

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
            A    + PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +      R + +
Sbjct: 169 -AVQPHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPS 225

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 226 DLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 284

Query: 322 KNYPYYRTADKGWQVNYTY 340
           KNYPYYRTADKGWQ   ++
Sbjct: 285 KNYPYYRTADKGWQRGESF 303


>gi|345806716|ref|XP_548802.3| PREDICTED: forkhead box protein K2 [Canis lupus familiaris]
          Length = 907

 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/254 (42%), Positives = 130/254 (51%), Gaps = 65/254 (25%)

Query: 87  NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           +F++ C GKNGVFVDG                                           F
Sbjct: 357 DFYLRCLGKNGVFVDG------------------------------------------VF 374

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           +RR   G P    P  L   CT RFPSTNI++ F +L +E       Q    S V  +  
Sbjct: 375 QRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV-- 422

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
               + + PL INIP+     IS  P PSPTGTISAANSCP+SPRG  +      R + A
Sbjct: 423 ---QAHISPLTINIPETMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPA 477

Query: 262 DLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFIT 321
           DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT
Sbjct: 478 DLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHIT 536

Query: 322 KNYPYYRTADKGWQ 335
           KNYPYYRTADKGWQ
Sbjct: 537 KNYPYYRTADKGWQ 550



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 551 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 610

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 611 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 648


>gi|363740726|ref|XP_425369.3| PREDICTED: forkhead box protein K2 [Gallus gallus]
          Length = 535

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 113/180 (62%), Gaps = 16/180 (8%)

Query: 161 FGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINI 220
             L S CT RFPSTNI++ F +L NE       Q    S V  +  P  S    PL INI
Sbjct: 10  ISLCSCCTFRFPSTNIKITFTALSNEKR---EKQEAPESPVKPV-QPQIS----PLTINI 61

Query: 221 PDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTN 275
           PD+    IS  P PSPTGTISAANSCP+SPRG  +      R + +DLH+ A  + +  +
Sbjct: 62  PDNMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMSRVIPSDLHLMADNSQSEND 119

Query: 276 VVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
                  S  +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 120 KEASGGDS-PKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 178



 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/117 (59%), Positives = 79/117 (67%), Gaps = 6/117 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 179 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 238

Query: 163 -LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRI 218
            LSSR     P+ +  L   S   +     T +S+S  G  V   P  S++ P L +
Sbjct: 239 PLSSRSAPASPNHSGVLSAHSSGVQ-----TPESLSREGSPVPMEPEPSAIQPKLAV 290


>gi|326930693|ref|XP_003211477.1| PREDICTED: forkhead box protein K2-like [Meleagris gallopavo]
          Length = 569

 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/192 (50%), Positives = 118/192 (61%), Gaps = 16/192 (8%)

Query: 149 RRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPA 208
           + +R +P   +     + CT RFPSTNI++ F +L NE       Q    S V  +  P 
Sbjct: 32  KEEREMPPHCSSVETDNTCTFRFPSTNIKITFTALSNEKR---EKQEAPESPVKPV-QPQ 87

Query: 209 TSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADL 263
            S    PL INIPD+    IS  P PSPTGTISAANSCP+SPRG  +      R + +DL
Sbjct: 88  IS----PLTINIPDNMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMSRVIPSDL 141

Query: 264 HMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKN 323
           H+ A  + +  +       S  +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKN
Sbjct: 142 HLMADNSQSENDKEASGGDS-PKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKN 200

Query: 324 YPYYRTADKGWQ 335
           YPYYRTADKGWQ
Sbjct: 201 YPYYRTADKGWQ 212



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/117 (59%), Positives = 79/117 (67%), Gaps = 6/117 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 213 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 272

Query: 163 -LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRI 218
            LSSR     P+ +  L   S   +     T +S+S  G  V   P  S++ P L +
Sbjct: 273 PLSSRSAPASPNHSGVLSAHSSGVQ-----TPESLSREGSPVPMEPEPSAIQPKLAV 324


>gi|449283120|gb|EMC89823.1| Forkhead box protein K2, partial [Columba livia]
          Length = 520

 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/174 (54%), Positives = 111/174 (63%), Gaps = 16/174 (9%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L NE       Q    S V  +  P  S    PL INIPD+   
Sbjct: 1   CTFRFPSTNIKITFTALSNEKR---EKQEAPESPVKPV-QPQIS----PLTINIPDNMAH 52

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMS 281
            IS  P PSPTGTISAANSCP+SPRG  +      R + +DLH+ A  + +  +      
Sbjct: 53  LIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMSRVIPSDLHLMADNSQSENDKEASGG 110

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            S  +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 111 DS-PKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 163



 Score =  128 bits (321), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 164 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 223

Query: 163 -LSSR 166
            LSSR
Sbjct: 224 PLSSR 228


>gi|33854|emb|CAA43200.1| transcription factor ILF [Homo sapiens]
          Length = 543

 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/200 (49%), Positives = 118/200 (59%), Gaps = 23/200 (11%)

Query: 141 LIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSG 200
            ++  F+RR   G P    P  L   CT RFPSTNI++ F +L +E       Q  S S 
Sbjct: 5   FVDGVFQRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQEASESP 54

Query: 201 VGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR---- 256
           V      A    + PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +     
Sbjct: 55  VK-----AVQPHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKV 107

Query: 257 -RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSG 315
            R + +DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A DKQLTL+G
Sbjct: 108 GRVMPSDLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNG 166

Query: 316 IYSFITKNYPYYRTADKGWQ 335
           IY+ ITKNYPYYRTADKGWQ
Sbjct: 167 IYTHITKNYPYYRTADKGWQ 186



 Score =  127 bits (320), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 187 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 246

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 247 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 284


>gi|355689115|gb|AER98723.1| forkhead box K2 [Mustela putorius furo]
          Length = 544

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/205 (48%), Positives = 119/205 (58%), Gaps = 23/205 (11%)

Query: 136 GSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQS 195
           G     ++  F+RR   G P    P  L   CT RFPSTNI++ F +L +E       Q 
Sbjct: 2   GKNGVFVDGVFQRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQE 51

Query: 196 VSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHN 255
              S V  +      + + PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +
Sbjct: 52  APESPVKPV-----QAHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGS 104

Query: 256 R-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQ 310
                 R + ADL++ A  +    N          +DDSKPPYSYAQLIVQA+  A DKQ
Sbjct: 105 SGYKMGRVIPADLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQ 163

Query: 311 LTLSGIYSFITKNYPYYRTADKGWQ 335
           LTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 164 LTLNGIYTHITKNYPYYRTADKGWQ 188



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 189 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 248

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 249 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 286


>gi|355569054|gb|EHH25335.1| hypothetical protein EGK_09135, partial [Macaca mulatta]
 gi|355754484|gb|EHH58449.1| hypothetical protein EGM_08306, partial [Macaca fascicularis]
          Length = 533

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/176 (53%), Positives = 111/176 (63%), Gaps = 16/176 (9%)

Query: 165 SRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHP 224
           SRCT RFPSTNI++ F +L +E       Q +S S V      A    + PL INIPD  
Sbjct: 12  SRCTFRFPSTNIKITFTALSSEKR---EKQELSESPVK-----AVQPHISPLTINIPDTM 63

Query: 225 HTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNH 279
              IS  P PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N    
Sbjct: 64  AHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPSDLNLMADNSQPE-NEKEA 120

Query: 280 MSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
                 +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 121 SGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 176



 Score =  127 bits (319), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 177 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 236

Query: 163 -LSSR 166
            LSSR
Sbjct: 237 PLSSR 241


>gi|440913029|gb|ELR62537.1| Forkhead box protein K1, partial [Bos grunniens mutus]
          Length = 562

 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/258 (42%), Positives = 135/258 (52%), Gaps = 81/258 (31%)

Query: 92  CNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ 151
           C GKNGVFVDG                                          AF+RR  
Sbjct: 1   CLGKNGVFVDG------------------------------------------AFQRR-- 16

Query: 152 RGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSS 211
            G P  +    L  +CTLRFPST I++QF SL ++ + AP                  S 
Sbjct: 17  -GAPALQ----LPKQCTLRFPSTAIKIQFTSLYHQEE-APA-----------------SP 53

Query: 212 LLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL-----HNRRNVS 260
           L P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG       + +NV+
Sbjct: 54  LRPLYPQISPLKIHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSSYRSVQNVT 112

Query: 261 ADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYS 318
           +DL +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+
Sbjct: 113 SDLQLAAEFAARAASEQQADTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYA 172

Query: 319 FITKNYPYYRTADKGWQV 336
            ITK+YPYYRTADKGWQV
Sbjct: 173 HITKHYPYYRTADKGWQV 190



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/45 (82%), Positives = 39/45 (86%), Gaps = 1/45 (2%)

Query: 123 EEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG-LSSR 166
           E PGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG LSSR
Sbjct: 208 ESPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFGPLSSR 252


>gi|148702888|gb|EDL34835.1| mCG12375, isoform CRA_a [Mus musculus]
          Length = 557

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/293 (39%), Positives = 138/293 (47%), Gaps = 95/293 (32%)

Query: 48  VRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRH 107
           ++++ +TIGRNSS+G VD                              NGVFVDG     
Sbjct: 1   MKKRSVTIGRNSSQGSVD------------------------------NGVFVDG----- 25

Query: 108 NLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRC 167
                                                 F+RR   G P    P  L   C
Sbjct: 26  -------------------------------------VFQRR---GAP----PLQLPRVC 41

Query: 168 TLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTE 227
           T RFPSTNI++ F +L +E       Q    S V  +  P  S    PL INIPD     
Sbjct: 42  TFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV-QPHIS----PLTINIPDTMAHL 93

Query: 228 ISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSL 282
           IS  P PSPTGTISAANSCP+SPRG  +      R + +DL + A  +    N       
Sbjct: 94  IS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPSDLSLMADNSQPE-NEKEASGG 150

Query: 283 SISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
              +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 151 DSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 203



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 46/69 (66%), Gaps = 7/69 (10%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+      R Q   P       
Sbjct: 204 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLV------RTQEPEPALTV-SN 256

Query: 163 LSSRCTLRF 171
            +S C  RF
Sbjct: 257 TTSACWQRF 265


>gi|296203464|ref|XP_002748915.1| PREDICTED: forkhead box protein K2 [Callithrix jacchus]
          Length = 585

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/181 (51%), Positives = 112/181 (61%), Gaps = 16/181 (8%)

Query: 160 PFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRIN 219
           P  ++++CT RFPSTNI++ F +L +E       Q  S S V      A    + PL IN
Sbjct: 59  PSRVAAQCTFRFPSTNIKITFTALSSEKR---EKQEASESLVK-----AVQPHISPLTIN 110

Query: 220 IPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHT 274
           IPD     IS  P PSPTGTISAANSCP+SPRG  +      R + +DL + A  +    
Sbjct: 111 IPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRGMPSDLSLMADNSQPE- 167

Query: 275 NVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGW 334
           N          +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGW
Sbjct: 168 NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGW 227

Query: 335 Q 335
           Q
Sbjct: 228 Q 228



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 229 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 288

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 289 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 326


>gi|170034959|ref|XP_001845339.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876797|gb|EDS40180.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 677

 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 169/359 (47%), Gaps = 108/359 (30%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFE-HPNFFMTCNG 94
           I +L  ++   ++ +  I +GRNSS+  VD ++G +SF+SR+H  I  + + +F + C  
Sbjct: 207 IGRLISKDNMLLISEDIIEVGRNSSKSQVDFHVGKNSFVSRKHFIIQHDMNDDFNLFCLS 266

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           KNGVF+D                                            F R+     
Sbjct: 267 KNGVFID------------------------------------------NVFHRK----- 279

Query: 155 PCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSS-----GVGVMGN--- 206
            C   P+ L   C++RFPSTNI++QF++L+++++       ++       G G +G+   
Sbjct: 280 -CAE-PYKLPKVCSIRFPSTNIKIQFENLIDQANNGGISIDLNQHTPIKVGTGTVGSVAA 337

Query: 207 --------------------------PATSSLLPPLRINIPD-----------------H 223
                                     P+ + +  PL+I+IP+                 H
Sbjct: 338 AAAAIAAAGGNLSSAGGGGGGGQKSPPSPNVVYSPLKISIPEQATSGGNPNLAVEIRGHH 397

Query: 224 P----HTEISSSPFPSPTGTISAANSCPTSPRG--LHNRRNVSADLHMAAHYAAAHTNVV 277
           P       +  S +PSPTGTISAANSCPTSPR    H     S + H + +   +     
Sbjct: 398 PGALRDVHVGGSGYPSPTGTISAANSCPTSPRQNTTHEFPQYSHNSHSSNNNNYSEFQAP 457

Query: 278 NHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT-ADKGWQ 335
              S +   D  KPPYSYAQLIVQA++++ +KQLTLSGIYSFI+KNYPYYRT A+KGWQ
Sbjct: 458 ASQSTAGGADGDKPPYSYAQLIVQAISASPEKQLTLSGIYSFISKNYPYYRTGANKGWQ 516



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/61 (81%), Positives = 56/61 (91%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQ+EPGKGSFWRIDP SE KLI+Q++R+RRQRG  CFR PFG
Sbjct: 517 NSIRHNLSLNRYFIKVPRSQDEPGKGSFWRIDPSSELKLIDQSYRKRRQRGSQCFRTPFG 576

Query: 163 L 163
           +
Sbjct: 577 M 577


>gi|403280729|ref|XP_003931864.1| PREDICTED: forkhead box protein K2 [Saimiri boliviensis
           boliviensis]
          Length = 755

 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/175 (53%), Positives = 109/175 (62%), Gaps = 16/175 (9%)

Query: 166 RCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPH 225
           RCT RFPSTNI++ F +L +E       Q  S S V      A    + PL INIPD   
Sbjct: 235 RCTFRFPSTNIKITFTALSSEKR---EKQEASESPVK-----AVQPNISPLTINIPDTMA 286

Query: 226 TEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHM 280
             IS  P PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N     
Sbjct: 287 HLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPSDLNLMADNSQPE-NEKEAS 343

Query: 281 SLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
                +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 344 GGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 398



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 399 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 458

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 459 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 496


>gi|170041990|ref|XP_001848727.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167865539|gb|EDS28922.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 781

 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 174/364 (47%), Gaps = 114/364 (31%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN--FFMTCN 93
           IA+L  ++   ++ +  I IGRNSSR  VD ++G +SF+SR+H+ +  +H +  F+++C 
Sbjct: 298 IARLISKDNILLISEDLIEIGRNSSRAQVDFHVGRNSFVSRKHLLLHHDHTDGEFYLSCL 357

Query: 94  GKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
            KNGVF+D                                            F R+    
Sbjct: 358 SKNGVFIDN------------------------------------------VFHRKGAE- 374

Query: 154 VPCFRAPFGLSSRCTLRFPSTNIRLQFQSLV--NESD-PAPTGQSV-------SSSGVGV 203
                 PF L   C++RFPSTNI++QF++L   N +D P    +++       SSS +G 
Sbjct: 375 ------PFLLPRVCSIRFPSTNIKIQFENLYHKNATDGPRDLLETIGGPFAASSSSNLG- 427

Query: 204 MGNPATSS------------------LLPPLRINIPDH--------PHTEIS-------S 230
           +G PA+                    +  PL+I+IP           H E+S        
Sbjct: 428 LGGPASGGNNAGNIHQAPSSNSNNSSMYAPLKISIPPEPPSSSSSMEHIEMSGRIRDNGK 487

Query: 231 SPFPSPTGTISAANSCPTSPR-GLHNRRNVSADLHMAAHYAAAHT--------------- 274
           SP+PSPTGTISAANSCPTSPR G H+    S                             
Sbjct: 488 SPYPSPTGTISAANSCPTSPRQGYHDFSAYSMVGVGGGGPGVLGHDGGGGGMGMLSAGNS 547

Query: 275 --NVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT-AD 331
             N     + S S ++ KPPYSYAQLIVQ+++++ +KQLTLSGIYSFI+KNYPYYR  A+
Sbjct: 548 SFNDFQPPATSQSLENEKPPYSYAQLIVQSISASPEKQLTLSGIYSFISKNYPYYRNGAN 607

Query: 332 KGWQ 335
           KGWQ
Sbjct: 608 KGWQ 611



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 88/154 (57%), Gaps = 26/154 (16%)

Query: 69  GLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKG 128
           G+ SFIS+          N+    NG N  +   NSIRHNLSLNRYFIKVPR Q+EPGKG
Sbjct: 590 GIYSFISK----------NYPYYRNGANKGWQ--NSIRHNLSLNRYFIKVPRLQDEPGKG 637

Query: 129 SFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRC----TLRFPSTNIRLQF---Q 181
           SFWRIDP SE KLI+Q++R+RRQRG  CFR P+G+        T   P    R      +
Sbjct: 638 SFWRIDPNSELKLIDQSYRKRRQRGSQCFRTPYGMPKSAPVSPTPMDPMAESREGSPIDE 697

Query: 182 SLVNESDPAPTGQSV-------SSSGVGVMGNPA 208
            L+ +S P   GQ V       SS+G  V G+P 
Sbjct: 698 ELLLQSAPGSPGQMVAANAYVHSSTGTSVAGHPG 731


>gi|157126561|ref|XP_001660929.1| hypothetical protein AaeL_AAEL010565 [Aedes aegypti]
 gi|108873235|gb|EAT37460.1| AAEL010565-PB [Aedes aegypti]
          Length = 716

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 178/365 (48%), Gaps = 114/365 (31%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN--FFMTCN 93
           IA+L  ++   ++ +  I IGRNSSR  VD ++G +SF+SR+H+ +  +H +  F+++C 
Sbjct: 275 IARLISKDNILLISEDLIEIGRNSSRAQVDFHVGRNSFVSRKHLLLHHDHTDGEFYLSCL 334

Query: 94  GKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
            KNGVF+D                                            F R+    
Sbjct: 335 SKNGVFIDN------------------------------------------IFHRKGAE- 351

Query: 154 VPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNES---------DPAPTGQSVSSSGVGVM 204
                 P+ L   C +RFPSTNI++QF++L +++         D +    + SSS + + 
Sbjct: 352 ------PYLLPRVCNIRFPSTNIKIQFENLYHKNNSEGPRDLLDTSCGPYAASSSTMQLT 405

Query: 205 GN-PATSS--------------LLPPLRINIPDH-------PHTEIS-------SSPFPS 235
           GN P+ +S              +  PL+I+IP          H ++S        SP+PS
Sbjct: 406 GNGPSNNSDMHPASISTTSSTSMYAPLKISIPPEPPSSSSMEHMDLSGRIRDNGKSPYPS 465

Query: 236 PTGTISAANSCPTSPRGLHNRRNVSADLHMA------AHYAAAHT--------------- 274
           PTGTISAANSCPTSPR  ++  +V    H+       +H     T               
Sbjct: 466 PTGTISAANSCPTSPRQGYHDFSVYTSGHIGPVGGILSHDLGGPTGGHLASSSSGGGVGS 525

Query: 275 ---NVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT-A 330
              N     + S S ++ KPPYSYAQLIVQ+++++ +KQLTLSGIYSFI+KNYPYYR  A
Sbjct: 526 HSFNDFQPPATSQSLENEKPPYSYAQLIVQSISASPEKQLTLSGIYSFISKNYPYYRNGA 585

Query: 331 DKGWQ 335
           +KGWQ
Sbjct: 586 NKGWQ 590



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 86/150 (57%), Gaps = 22/150 (14%)

Query: 69  GLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKG 128
           G+ SFIS+          N+    NG N  +   NSIRHNLSLNRYFIKVPR Q+EPGKG
Sbjct: 569 GIYSFISK----------NYPYYRNGANKGWQ--NSIRHNLSLNRYFIKVPRLQDEPGKG 616

Query: 129 SFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRC----TLRFPSTNIRLQFQSLV 184
           SFWRIDP SE KLI+Q++R+RRQRG  CFR P+G+        T   P +        ++
Sbjct: 617 SFWRIDPNSELKLIDQSYRKRRQRGSQCFRTPYGMPKSAPVSPTPMDPESREGSPLHDML 676

Query: 185 NESDPAPTGQSV------SSSGVGVMGNPA 208
            +S P   GQ        SS+G  V G+P 
Sbjct: 677 LQSAPGSPGQVAANAYVHSSTGTSVAGHPG 706


>gi|157126563|ref|XP_001660930.1| hypothetical protein AaeL_AAEL010565 [Aedes aegypti]
 gi|108873236|gb|EAT37461.1| AAEL010565-PA [Aedes aegypti]
          Length = 714

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 178/365 (48%), Gaps = 114/365 (31%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN--FFMTCN 93
           IA+L  ++   ++ +  I IGRNSSR  VD ++G +SF+SR+H+ +  +H +  F+++C 
Sbjct: 275 IARLISKDNILLISEDLIEIGRNSSRAQVDFHVGRNSFVSRKHLLLHHDHTDGEFYLSCL 334

Query: 94  GKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
            KNGVF+D                                            F R+    
Sbjct: 335 SKNGVFIDN------------------------------------------IFHRKGAE- 351

Query: 154 VPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNES---------DPAPTGQSVSSSGVGVM 204
                 P+ L   C +RFPSTNI++QF++L +++         D +    + SSS + + 
Sbjct: 352 ------PYLLPRVCNIRFPSTNIKIQFENLYHKNNSEGPRDLLDTSCGPYAASSSTMQLT 405

Query: 205 GN-PATSS--------------LLPPLRINIPDH-------PHTEIS-------SSPFPS 235
           GN P+ +S              +  PL+I+IP          H ++S        SP+PS
Sbjct: 406 GNGPSNNSDMHPASISTTSSTSMYAPLKISIPPEPPSSSSMEHMDLSGRIRDNGKSPYPS 465

Query: 236 PTGTISAANSCPTSPRGLHNRRNVSADLHMA------AHYAAAHT--------------- 274
           PTGTISAANSCPTSPR  ++  +V    H+       +H     T               
Sbjct: 466 PTGTISAANSCPTSPRQGYHDFSVYTSGHIGPVGGILSHDLGGPTGGHLASSSSGGGVGS 525

Query: 275 ---NVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT-A 330
              N     + S S ++ KPPYSYAQLIVQ+++++ +KQLTLSGIYSFI+KNYPYYR  A
Sbjct: 526 HSFNDFQPPATSQSLENEKPPYSYAQLIVQSISASPEKQLTLSGIYSFISKNYPYYRNGA 585

Query: 331 DKGWQ 335
           +KGWQ
Sbjct: 586 NKGWQ 590



 Score =  117 bits (293), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 86/150 (57%), Gaps = 22/150 (14%)

Query: 69  GLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKG 128
           G+ SFIS+          N+    NG N  +   NSIRHNLSLNRYFIKVPR Q+EPGKG
Sbjct: 569 GIYSFISK----------NYPYYRNGANKGWQ--NSIRHNLSLNRYFIKVPRLQDEPGKG 616

Query: 129 SFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRC----TLRFPSTNIRLQFQSLV 184
           SFWRIDP SE KLI+Q++R+RRQRG  CFR P+G+        T   P +        ++
Sbjct: 617 SFWRIDPNSELKLIDQSYRKRRQRGSQCFRTPYGMPKSAPVSPTPMDPESREGSPLHDML 676

Query: 185 NESDPAPTGQSV------SSSGVGVMGNPA 208
            +S P   GQ        SS+G  V G+P 
Sbjct: 677 LQSAPGSPGQVAANAYVHSSTGTSVAGHPG 706


>gi|157126559|ref|XP_001660928.1| hypothetical protein AaeL_AAEL010565 [Aedes aegypti]
 gi|108873234|gb|EAT37459.1| AAEL010565-PC [Aedes aegypti]
          Length = 760

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 178/365 (48%), Gaps = 114/365 (31%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN--FFMTCN 93
           IA+L  ++   ++ +  I IGRNSSR  VD ++G +SF+SR+H+ +  +H +  F+++C 
Sbjct: 275 IARLISKDNILLISEDLIEIGRNSSRAQVDFHVGRNSFVSRKHLLLHHDHTDGEFYLSCL 334

Query: 94  GKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
            KNGVF+D                                            F R+    
Sbjct: 335 SKNGVFIDN------------------------------------------IFHRKGAE- 351

Query: 154 VPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNES---------DPAPTGQSVSSSGVGVM 204
                 P+ L   C +RFPSTNI++QF++L +++         D +    + SSS + + 
Sbjct: 352 ------PYLLPRVCNIRFPSTNIKIQFENLYHKNNSEGPRDLLDTSCGPYAASSSTMQLT 405

Query: 205 GN-PATSS--------------LLPPLRINIPDH-------PHTEIS-------SSPFPS 235
           GN P+ +S              +  PL+I+IP          H ++S        SP+PS
Sbjct: 406 GNGPSNNSDMHPASISTTSSTSMYAPLKISIPPEPPSSSSMEHMDLSGRIRDNGKSPYPS 465

Query: 236 PTGTISAANSCPTSPRGLHNRRNVSADLHMA------AHYAAAHT--------------- 274
           PTGTISAANSCPTSPR  ++  +V    H+       +H     T               
Sbjct: 466 PTGTISAANSCPTSPRQGYHDFSVYTSGHIGPVGGILSHDLGGPTGGHLASSSSGGGVGS 525

Query: 275 ---NVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT-A 330
              N     + S S ++ KPPYSYAQLIVQ+++++ +KQLTLSGIYSFI+KNYPYYR  A
Sbjct: 526 HSFNDFQPPATSQSLENEKPPYSYAQLIVQSISASPEKQLTLSGIYSFISKNYPYYRNGA 585

Query: 331 DKGWQ 335
           +KGWQ
Sbjct: 586 NKGWQ 590



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/155 (45%), Positives = 87/155 (56%), Gaps = 22/155 (14%)

Query: 69  GLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKG 128
           G+ SFIS+          N+    NG N  +   NSIRHNLSLNRYFIKVPR Q+EPGKG
Sbjct: 569 GIYSFISK----------NYPYYRNGANKGWQ--NSIRHNLSLNRYFIKVPRLQDEPGKG 616

Query: 129 SFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRC----TLRFPSTNIRLQFQSLV 184
           SFWRIDP SE KLI+Q++R+RRQRG  CFR P+G+        T   P +        ++
Sbjct: 617 SFWRIDPNSELKLIDQSYRKRRQRGSQCFRTPYGMPKSAPVSPTPMDPESREGSPLHDML 676

Query: 185 NESDPAPTGQSV------SSSGVGVMGNPATSSLL 213
            +S P   GQ        SS+G  V G+P     L
Sbjct: 677 LQSAPGSPGQVAANAYVHSSTGTSVAGHPGQEDFL 711


>gi|149212459|gb|ABR22534.1| forkhead box transcription factor subgroup K2 [Aedes aegypti]
          Length = 716

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 178/365 (48%), Gaps = 114/365 (31%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN--FFMTCN 93
           IA+L  ++   ++ +  I IGRNSSR  VD ++G +SF+SR+H+ +  +H +  F+++C 
Sbjct: 275 IARLISKDNILLISEDLIEIGRNSSRAQVDFHVGRNSFVSRKHLLLHHDHTDGEFYLSCL 334

Query: 94  GKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
            KNGVF+D                                            F R+    
Sbjct: 335 SKNGVFIDN------------------------------------------IFHRKGAE- 351

Query: 154 VPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNES---------DPAPTGQSVSSSGVGVM 204
                 P+ L   C +RFPSTNI++QF++L +++         D +    + SSS + + 
Sbjct: 352 ------PYLLPRVCNIRFPSTNIKIQFENLYHKNNSEGPRDLLDTSCGPYAASSSTMQLT 405

Query: 205 GN-PATSS--------------LLPPLRINIPDH-------PHTEIS-------SSPFPS 235
           GN P+ +S              +  PL+I+IP          H ++S        SP+PS
Sbjct: 406 GNGPSNNSDMHPASISTTSSTSMYAPLKISIPPEPPSSSSMEHMDLSGRIRDNGKSPYPS 465

Query: 236 PTGTISAANSCPTSPRGLHNRRNVSADLHMA------AHYAAAHT--------------- 274
           PTGTISAANSCPTSPR  ++  +V    H+       +H     T               
Sbjct: 466 PTGTISAANSCPTSPRQGYHDFSVYTSGHIGPVGGILSHDLGGPTGGHLASSSSGGGVGS 525

Query: 275 ---NVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT-A 330
              N     + S S ++ KPPYSYAQLIVQ+++++ +KQLTLSGIYSFI+KNYPYYR  A
Sbjct: 526 HSFNDFQPPATSQSLENEKPPYSYAQLIVQSISASPEKQLTLSGIYSFISKNYPYYRNGA 585

Query: 331 DKGWQ 335
           +KGWQ
Sbjct: 586 NKGWQ 590



 Score =  117 bits (293), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 86/150 (57%), Gaps = 22/150 (14%)

Query: 69  GLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKG 128
           G+ SFIS+          N+    NG N  +   NSIRHNLSLNRYFIKVPR Q+EPGKG
Sbjct: 569 GIYSFISK----------NYPYYRNGANKGWQ--NSIRHNLSLNRYFIKVPRLQDEPGKG 616

Query: 129 SFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRC----TLRFPSTNIRLQFQSLV 184
           SFWRIDP SE KLI+Q++R+RRQRG  CFR P+G+        T   P +        ++
Sbjct: 617 SFWRIDPNSELKLIDQSYRKRRQRGSQCFRTPYGMPKSAPVSPTPMDPESREGSPLHDML 676

Query: 185 NESDPAPTGQSV------SSSGVGVMGNPA 208
            +S P   GQ        SS+G  V G+P 
Sbjct: 677 LQSAPGSPGQVAANAYVHSSTGTSVAGHPG 706


>gi|426346289|ref|XP_004040812.1| PREDICTED: forkhead box protein K2 [Gorilla gorilla gorilla]
          Length = 540

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/174 (52%), Positives = 108/174 (62%), Gaps = 16/174 (9%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L +E       Q  S S V      A    + PL INIPD    
Sbjct: 21  CTFRFPSTNIKITFTALSSEKR---EKQEASESPVK-----AVQPHISPLTINIPDTMAH 72

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMS 281
            IS  P PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N      
Sbjct: 73  LIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPSDLNLMADNSQPE-NEKEASG 129

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
               +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 130 GDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 183



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 184 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 243

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 244 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 281


>gi|395749632|ref|XP_002828038.2| PREDICTED: forkhead box protein K2 [Pongo abelii]
          Length = 573

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/174 (52%), Positives = 107/174 (61%), Gaps = 16/174 (9%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L +E       Q  S S V      A    + PL INIPD    
Sbjct: 54  CTFRFPSTNIKITFTALSSEKR---EKQEASESPVK-----AVQPHISPLTINIPDTMAH 105

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMS 281
            IS  P PSPTGTISAANSCP+SPRG  +      R + +DL + A  +    N      
Sbjct: 106 LIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPSDLSLMADNSQPE-NEKEASG 162

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
               +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 163 GDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 216



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 217 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 276

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 277 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 314


>gi|301782121|ref|XP_002926479.1| PREDICTED: forkhead box protein K2-like [Ailuropoda melanoleuca]
          Length = 636

 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/174 (52%), Positives = 108/174 (62%), Gaps = 16/174 (9%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L +E       Q    S V  +      + + PL INIPD    
Sbjct: 117 CTFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV-----QAHISPLTINIPDTMAH 168

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMS 281
            IS  P PSPTGTISAANSCP+SPRG  +      R + ADL++ A  +    N      
Sbjct: 169 LIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPADLNIMADNSQPE-NEKEASG 225

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
               +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 226 GDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 279



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 280 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 339

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 340 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 377


>gi|281354395|gb|EFB29979.1| hypothetical protein PANDA_016124 [Ailuropoda melanoleuca]
          Length = 520

 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/174 (52%), Positives = 108/174 (62%), Gaps = 16/174 (9%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L +E       Q    S V  +      + + PL INIPD    
Sbjct: 1   CTFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV-----QAHISPLTINIPDTMAH 52

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMS 281
            IS  P PSPTGTISAANSCP+SPRG  +      R + ADL++ A  +    N      
Sbjct: 53  LIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPADLNIMADNSQPE-NEKEASG 109

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
               +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 110 GDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 163



 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 164 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 223

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 224 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 261


>gi|395826753|ref|XP_003786580.1| PREDICTED: forkhead box protein K2 [Otolemur garnettii]
          Length = 532

 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/176 (52%), Positives = 109/176 (61%), Gaps = 18/176 (10%)

Query: 166 RCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPH 225
           RCT RFPSTNI++ F +L +E       Q    S V      A    + PL INIPD   
Sbjct: 12  RCTFRFPSTNIKITFTALSSEKR---EKQEAPESPVK-----AVQPHISPLTINIPDTMA 63

Query: 226 TEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLH-MAAHYAAAHTNVVNH 279
             IS  P PSPTGTISAANSCP+SPRG  +      R + +DL+ MA +    H    + 
Sbjct: 64  HLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVMPSDLNLMAENSQPEHEKEAS- 120

Query: 280 MSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
                 +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 121 -GGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 175



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 176 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 235

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 236 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 273


>gi|432119128|gb|ELK38348.1| Forkhead box protein K2 [Myotis davidii]
          Length = 522

 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/176 (52%), Positives = 110/176 (62%), Gaps = 18/176 (10%)

Query: 166 RCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPH 225
           RCT RFPSTNI++ F +L +E       Q    S V  +      + + PL INIPD   
Sbjct: 3   RCTFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV-----QAHISPLTINIPDTMA 54

Query: 226 TEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLH-MAAHYAAAHTNVVNH 279
             IS  P PSPTGTISAANSCP+SPRG  +      R +++DL  MA +    H    + 
Sbjct: 55  HLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIASDLSLMADNSQPEHEKEAS- 111

Query: 280 MSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
                 +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 112 -GGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 166



 Score =  128 bits (321), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 167 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 226

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 227 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 264


>gi|410982056|ref|XP_003997378.1| PREDICTED: forkhead box protein K2 [Felis catus]
          Length = 610

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/174 (52%), Positives = 108/174 (62%), Gaps = 16/174 (9%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L +E       Q    S V  +      + + PL INIPD    
Sbjct: 91  CTFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV-----QAHISPLTINIPDTMAH 142

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMS 281
            IS  P PSPTGTISAANSCP+SPRG  +      R + ADL++ A  +    N      
Sbjct: 143 LIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPADLNLMADNSQPE-NEKEASG 199

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
               +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 200 GDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 253



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 254 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 313

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 314 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 351


>gi|344291274|ref|XP_003417361.1| PREDICTED: forkhead box protein K2-like [Loxodonta africana]
          Length = 822

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/175 (53%), Positives = 109/175 (62%), Gaps = 16/175 (9%)

Query: 166 RCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPH 225
           RCT RFPSTNI++ F +L +E       Q    S V  +  P  S    PL INIPD   
Sbjct: 302 RCTFRFPSTNIKITFTALSSERR---EKQEAPESPVKPV-QPQIS----PLTINIPDSMA 353

Query: 226 TEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHM 280
             IS  P PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N     
Sbjct: 354 HLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVIPSDLNLMADNSQPE-NEKEAS 410

Query: 281 SLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
                +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 411 GGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 465



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 466 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 525

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 526 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 563


>gi|284261|pir||B42827 interleukin enhancer-binding factor ILF-2 - human
          Length = 497

 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/200 (49%), Positives = 117/200 (58%), Gaps = 23/200 (11%)

Query: 141 LIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSG 200
            ++  F+RR   G P    P  L   CT RFPSTNI++ F +L +E       Q  S S 
Sbjct: 5   FVDGVFQRR---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQEASESP 54

Query: 201 VGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR---- 256
           V      A    + PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +     
Sbjct: 55  VK-----AVQPHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKV 107

Query: 257 -RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSG 315
            R + +DL++ A  +    N          +DDSKPPYSYAQLIVQA+  A DKQLTL+G
Sbjct: 108 GRVMPSDLNLMADNSQPE-NEKEASGGDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNG 166

Query: 316 IYSFITKNYPYYRTADKGWQ 335
           IY+ ITKNYPYYRTADKG Q
Sbjct: 167 IYTHITKNYPYYRTADKGNQ 186



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 68/98 (69%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLI QAFR+RR RGVPCFR P G
Sbjct: 187 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLISQAFRKRRPRGVPCFRTPLG 246

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 247 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 284


>gi|149758756|ref|XP_001490395.1| PREDICTED: forkhead box protein K2 [Equus caballus]
          Length = 567

 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/174 (51%), Positives = 108/174 (62%), Gaps = 16/174 (9%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L +E       Q    S V  +      + + PL INIPD    
Sbjct: 48  CTFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV-----QAHISPLTINIPDTMAH 99

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMS 281
            IS  P PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N      
Sbjct: 100 LIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPSDLNLMADSSQPE-NEKEASG 156

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
               +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 157 GDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 210



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 211 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 270

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 271 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 308


>gi|440895969|gb|ELR48021.1| Forkhead box protein K2, partial [Bos grunniens mutus]
          Length = 520

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/174 (51%), Positives = 107/174 (61%), Gaps = 16/174 (9%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L +E       Q    S V  +      + + PL INIPD    
Sbjct: 1   CTFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV-----QAHISPLTINIPDTMAH 52

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMS 281
            IS  P PSPTGTISAANSCP+SPRG  +      R + +DL++    +    N      
Sbjct: 53  LIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPSDLNLMTDSSQPE-NEKEASG 109

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
               +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 110 GDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 163



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 164 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 223

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 224 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 261


>gi|148702889|gb|EDL34836.1| mCG12375, isoform CRA_b [Mus musculus]
          Length = 450

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/174 (52%), Positives = 107/174 (61%), Gaps = 16/174 (9%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L +E       Q    S V  +  P  S    PL INIPD    
Sbjct: 1   CTFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV-QPHIS----PLTINIPDTMAH 52

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMS 281
            IS  P PSPTGTISAANSCP+SPRG  +      R + +DL + A  +    N      
Sbjct: 53  LIS--PLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPSDLSLMADNSQPE-NEKEASG 109

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
               +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 110 GDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 163



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 164 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 223

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 224 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 261


>gi|354468909|ref|XP_003496892.1| PREDICTED: forkhead box protein K2-like [Cricetulus griseus]
          Length = 707

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/174 (52%), Positives = 108/174 (62%), Gaps = 16/174 (9%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L +E       Q    S V  +  P  S    PL INIPD    
Sbjct: 211 CTFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV-QPHIS----PLTINIPDTMAH 262

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMS 281
            IS  P PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N      
Sbjct: 263 LIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPSDLNLMADNSQPE-NEKEASG 319

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
               +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 320 GDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 373



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 374 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 433

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 434 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 471


>gi|157120350|ref|XP_001653620.1| forkhead box protein (AaegFOXK1) [Aedes aegypti]
 gi|108875001|gb|EAT39226.1| AAEL008958-PA [Aedes aegypti]
 gi|148361435|gb|ABQ59299.1| forkhead box subgroup K1 [Aedes aegypti]
          Length = 692

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 170/376 (45%), Gaps = 138/376 (36%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFE-HPNFFMTCNG 94
           I +L  ++   ++ +  I +GRNSS+  VD ++G +SF+SR+H  I  + +  F + C  
Sbjct: 219 IGRLISKDNMLLISEDIIEVGRNSSKSQVDFHVGKNSFVSRKHFIIQHDINDEFNLFCLS 278

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           KNGVF+D                                            F R+     
Sbjct: 279 KNGVFIDN------------------------------------------VFHRK----- 291

Query: 155 PCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPA------------------------ 190
            C   P+ L   C++RFPSTNI++QF++L+++++                          
Sbjct: 292 -CAE-PYKLPKVCSIRFPSTNIKIQFENLIDQANNGGISIDLNQHTPIKVGTGSGGSAAA 349

Query: 191 ------------PTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT------------ 226
                         G + +++G     +P+++ +  PL+I+IP+   +            
Sbjct: 350 AAAAIAAVGGNLSVGGTTTAAG---DKSPSSNVVYSPLKISIPEQSGSSNPNLAVEIRGH 406

Query: 227 ------------------EISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAH 268
                              IS S +PSPTGTISAANSCPTSPR          + H    
Sbjct: 407 YAGGGSGGGGGGGRDNSMHISGSGYPSPTGTISAANSCPTSPR---------QNTHEFPQ 457

Query: 269 YAAA--------HTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFI 320
           Y+          +       S S+++ D KPPYSYAQLIVQA++++ +KQLTLSGIYSFI
Sbjct: 458 YSHNSHSSNNNNYVEFQAPASQSMAEGD-KPPYSYAQLIVQAISASPEKQLTLSGIYSFI 516

Query: 321 TKNYPYYRT-ADKGWQ 335
           +KNYPYYRT A+KGWQ
Sbjct: 517 SKNYPYYRTGANKGWQ 532



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 50/61 (81%), Positives = 56/61 (91%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQ+EPGKGSFWRIDP SE KLI+Q++R+RRQRG  CFR PFG
Sbjct: 533 NSIRHNLSLNRYFIKVPRSQDEPGKGSFWRIDPSSELKLIDQSYRKRRQRGSQCFRTPFG 592

Query: 163 L 163
           +
Sbjct: 593 M 593


>gi|351706451|gb|EHB09370.1| Forkhead box protein K2, partial [Heterocephalus glaber]
          Length = 349

 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/175 (52%), Positives = 106/175 (60%), Gaps = 16/175 (9%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L +E    P         V     P  S    PL I+IPD    
Sbjct: 1   CTFRFPSTNIKITFTALSSEKREKPEAPESPVKPV----QPHIS----PLTISIPDTMAH 52

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMS 281
            IS  P PSPTGTISAANSCP+SPRG  +      R + +DL + A  +    N      
Sbjct: 53  LIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVMPSDLSLMADNSQPE-NEKEASG 109

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQV 336
               +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQV
Sbjct: 110 GDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQV 164


>gi|291413667|ref|XP_002723092.1| PREDICTED: forkhead box K2 [Oryctolagus cuniculus]
          Length = 537

 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/174 (52%), Positives = 107/174 (61%), Gaps = 16/174 (9%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L +E       Q    S V  +  P  S    PL INIPD    
Sbjct: 17  CTFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV-QPHIS----PLTINIPDTMAH 68

Query: 227 EISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMS 281
            IS  P PSPTGTISAANSCP+SPRG  +      R + +DL++    +    N      
Sbjct: 69  LIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVMPSDLNLMTDNSQPE-NEKEASG 125

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
               +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 126 GDSPKDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 179



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 180 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 239

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 240 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 277


>gi|332257775|ref|XP_003277979.1| PREDICTED: forkhead box protein K1 [Nomascus leucogenys]
          Length = 570

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/193 (48%), Positives = 119/193 (61%), Gaps = 33/193 (17%)

Query: 156 CFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP- 214
           C++   GL  RCT RFPST I++QF SL ++ + AP                  S L P 
Sbjct: 15  CYQL-HGLLLRCTFRFPSTAIKIQFTSLYHKEE-APA-----------------SPLRPL 55

Query: 215 -----PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLH 264
                PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL 
Sbjct: 56  YPQISPLKIHIPE-PDLRSMVSPVPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTSDLQ 114

Query: 265 MAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITK 322
           +AA +AA   +    +       +D+SKPP+SYAQLIVQA++SA D+QLTLSGIY+ ITK
Sbjct: 115 LAAEFAAKAASEQQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDRQLTLSGIYAHITK 174

Query: 323 NYPYYRTADKGWQ 335
           +YPYYRTADKGWQ
Sbjct: 175 HYPYYRTADKGWQ 187



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 188 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 247

Query: 163 -LSSR 166
            LSSR
Sbjct: 248 PLSSR 252


>gi|326928945|ref|XP_003210633.1| PREDICTED: forkhead box protein K1-like [Meleagris gallopavo]
          Length = 665

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/182 (50%), Positives = 115/182 (63%), Gaps = 22/182 (12%)

Query: 164 SSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP---PLRINI 220
           S RCT RFPST I++QF SL ++ +     +  SS        P    L P   PL+I+I
Sbjct: 133 SIRCTFRFPSTVIKIQFTSLYHKEE---VKEEASS--------PPLRPLYPQISPLKIHI 181

Query: 221 PDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTN 275
           P+ P      SP PSPTGTIS  NSCP SPRG  +       N+++DL +AA YAA   +
Sbjct: 182 PE-PDLRSVVSPLPSPTGTISVPNSCPASPRGAGSSGYRFVHNITSDLQLAAEYAAKAAS 240

Query: 276 V--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKG 333
               +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKG
Sbjct: 241 EQQADASGGDSPKDESKPPYSYAQLIVQAISSAPDRQLTLSGIYAHITKHYPYYRTADKG 300

Query: 334 WQ 335
           WQ
Sbjct: 301 WQ 302



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 303 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 362

Query: 163 -LSSR 166
            LSSR
Sbjct: 363 PLSSR 367


>gi|410927534|ref|XP_003977196.1| PREDICTED: forkhead box protein K2-like, partial [Takifugu
           rubripes]
          Length = 676

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/178 (50%), Positives = 108/178 (60%), Gaps = 19/178 (10%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHT 226
           CT RFPSTNI++ F +L +        +    S V  +  P  S    PL INIPD+   
Sbjct: 223 CTFRFPSTNIKITFTALTSTKK---LKREAPESPVKPV-QPHIS----PLTINIPDNIAH 274

Query: 227 EISSSPFPSPTGTISAANSCPTSPRG-------LHNRRNVSADLHMAAHYAAAHTNV--V 277
            +S  P PSPTGTISAANSCP+SPRG       +  R   SA+L +    +        +
Sbjct: 275 LMS--PLPSPTGTISAANSCPSSPRGAGSSGFRMGGRMVTSAELQLLNENSQPEXXXXXL 332

Query: 278 NHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
              +    QDDSKPPYSYAQLIVQA+A A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 333 TGPAPCSRQDDSKPPYSYAQLIVQAIALAPDKQLTLNGIYNHITKNYPYYRTADKGWQ 390



 Score =  118 bits (295), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/65 (86%), Positives = 57/65 (87%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQEEPGKGSFWRIDP SE KLIEQAFR+RR RG PCFR P G
Sbjct: 391 NSIRHNLSLNRYFIKVARSQEEPGKGSFWRIDPSSEAKLIEQAFRKRRPRGGPCFRTPHG 450

Query: 163 -LSSR 166
            LSSR
Sbjct: 451 PLSSR 455


>gi|449476290|ref|XP_004175720.1| PREDICTED: forkhead box protein K1 [Taeniopygia guttata]
          Length = 532

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/183 (49%), Positives = 113/183 (61%), Gaps = 28/183 (15%)

Query: 166 RCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRIN 219
           RCT RFPST I++QF SL ++ +              V    +T  L P      PL+I+
Sbjct: 3   RCTFRFPSTVIKIQFTSLYHKEE--------------VKEEASTHPLRPLYPQISPLKIH 48

Query: 220 IPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHT 274
           IP+ P      SP PSPTGTIS  NSCP SPRG  +       N+++DL +AA YAA   
Sbjct: 49  IPE-PDLRSVVSPLPSPTGTISVPNSCPASPRGAGSSGYRFVHNITSDLQLAAEYAAKAA 107

Query: 275 NV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADK 332
           +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADK
Sbjct: 108 SEQQADASGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADK 167

Query: 333 GWQ 335
           GWQ
Sbjct: 168 GWQ 170



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 171 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 230

Query: 163 -LSSR 166
            LSSR
Sbjct: 231 PLSSR 235


>gi|380805393|gb|AFE74572.1| forkhead box protein K1, partial [Macaca mulatta]
          Length = 338

 Score =  145 bits (365), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/196 (46%), Positives = 120/196 (61%), Gaps = 30/196 (15%)

Query: 150 RQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPAT 209
           ++RG P  + P     +CT RFPST I++QF SL ++ + AP                  
Sbjct: 1   QRRGAPALQLP----KQCTFRFPSTAIKIQFTSLYHKEE-APAS--------------PL 41

Query: 210 SSLLP---PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSA 261
             L P   PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++
Sbjct: 42  RPLYPQISPLKIHIPE-PDLRSMVSPVPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTS 100

Query: 262 DLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSF 319
           DL +AA +AA   +    +       +D+SKPP+SYAQLIVQA++SA D+QLTLSGIY+ 
Sbjct: 101 DLQLAAEFAAKAASEQQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDRQLTLSGIYAH 160

Query: 320 ITKNYPYYRTADKGWQ 335
           ITK+YPYYRTADKGWQ
Sbjct: 161 ITKHYPYYRTADKGWQ 176



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 59/65 (90%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRI P SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 177 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIAPASEAKLVEQAFRKRRQRGVSCFRTPFG 236

Query: 163 -LSSR 166
            LSSR
Sbjct: 237 PLSSR 241


>gi|395514808|ref|XP_003761604.1| PREDICTED: forkhead box protein K1, partial [Sarcophilus harrisii]
          Length = 524

 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/179 (49%), Positives = 112/179 (62%), Gaps = 26/179 (14%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP---PLRINIPDH 223
           CT RFPST I++QF SL ++ +  P+                   L P   PL+I+IP+ 
Sbjct: 1   CTFRFPSTVIKIQFTSLYHKEEAPPS---------------PLRPLYPQISPLKIHIPE- 44

Query: 224 PHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV-- 276
           P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   +   
Sbjct: 45  PDLRTLVSPIPSPTGTISVPNSCPASPRGAGSSGYRFVQNVTSDLQLAAEFAAKAASEQQ 104

Query: 277 VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 105 ADTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ 163



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 62/72 (86%), Gaps = 1/72 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 164 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 223

Query: 163 -LSSRCTLRFPS 173
            LSSR     P+
Sbjct: 224 PLSSRSAPASPT 235


>gi|355560431|gb|EHH17117.1| hypothetical protein EGK_13435, partial [Macaca mulatta]
          Length = 547

 Score =  144 bits (363), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/183 (49%), Positives = 114/183 (62%), Gaps = 32/183 (17%)

Query: 166 RCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRIN 219
           RCT RFPST I++QF SL ++ + AP                  S L P      PL+I+
Sbjct: 1   RCTFRFPSTAIKIQFTSLYHKEE-APA-----------------SPLRPLYPQISPLKIH 42

Query: 220 IPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHT 274
           IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   
Sbjct: 43  IPE-PDLRSMVSPVPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTSDLQLAAEFAAKAA 101

Query: 275 NV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADK 332
           +    +       +D+SKPP+SYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADK
Sbjct: 102 SEQQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADK 161

Query: 333 GWQ 335
           GWQ
Sbjct: 162 GWQ 164



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 62/72 (86%), Gaps = 1/72 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 165 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 224

Query: 163 -LSSRCTLRFPS 173
            LSSR     P+
Sbjct: 225 PLSSRSAPASPT 236


>gi|410984301|ref|XP_003998468.1| PREDICTED: forkhead box protein K1 [Felis catus]
          Length = 654

 Score =  144 bits (363), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 113/182 (62%), Gaps = 32/182 (17%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRINI 220
           CTLRFPST I++QF SL  + + AP                  S L P      PL+I+I
Sbjct: 113 CTLRFPSTAIKIQFTSLYRQEE-APA-----------------SPLRPLYPQISPLKIHI 154

Query: 221 PDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTN 275
           P+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   +
Sbjct: 155 PE-PDLRSLVSPVPSPTGTISVPNSCPASPRGAGSSGYRFVQNVTSDLQLAAEFAAKAAS 213

Query: 276 V--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKG 333
               +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKG
Sbjct: 214 EQQADASGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKG 273

Query: 334 WQ 335
           WQ
Sbjct: 274 WQ 275



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 276 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 335

Query: 163 -LSSR 166
            LSSR
Sbjct: 336 PLSSR 340


>gi|403287228|ref|XP_003934854.1| PREDICTED: forkhead box protein K1 [Saimiri boliviensis
           boliviensis]
          Length = 652

 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/200 (46%), Positives = 120/200 (60%), Gaps = 40/200 (20%)

Query: 149 RRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPA 208
           +R+RGV         +  CT RFPST I++QF SL ++ + AP                 
Sbjct: 97  KRKRGV--------CACLCTFRFPSTAIKIQFTSLYHKEE-APA---------------- 131

Query: 209 TSSLLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----R 257
            S L P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +      +
Sbjct: 132 -SPLRPLYPQISPLKIHIPE-PDLRSMVSPIPSPTGTISVPNSCPASPRGAGSSSYRFVQ 189

Query: 258 NVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSG 315
           NV++DL +AA +AA   +    +       +D+SKPP+SYAQLIVQA++SA D+QLTLSG
Sbjct: 190 NVTSDLQLAAEFAAKAASEQQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDRQLTLSG 249

Query: 316 IYSFITKNYPYYRTADKGWQ 335
           IY+ ITK+YPYYRTADKGWQ
Sbjct: 250 IYAHITKHYPYYRTADKGWQ 269



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 270 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 329

Query: 163 -LSSR 166
            LSSR
Sbjct: 330 PLSSR 334


>gi|426355379|ref|XP_004045101.1| PREDICTED: forkhead box protein K1 [Gorilla gorilla gorilla]
          Length = 570

 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/183 (49%), Positives = 114/183 (62%), Gaps = 32/183 (17%)

Query: 166 RCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRIN 219
           RCT RFPST I++QF SL ++ + AP                  S L P      PL+I+
Sbjct: 24  RCTFRFPSTAIKIQFTSLYHKEE-APA-----------------SPLRPLYPQISPLKIH 65

Query: 220 IPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHT 274
           IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   
Sbjct: 66  IPE-PDLRSMVSPVPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTSDLQLAAEFAAKAA 124

Query: 275 NV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADK 332
           +    +       +D+SKPP+SYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADK
Sbjct: 125 SEQQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADK 184

Query: 333 GWQ 335
           GWQ
Sbjct: 185 GWQ 187



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 188 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 247

Query: 163 -LSSR 166
            LSSR
Sbjct: 248 PLSSR 252


>gi|118097798|ref|XP_414784.2| PREDICTED: forkhead box protein K1 [Gallus gallus]
          Length = 533

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 114/180 (63%), Gaps = 22/180 (12%)

Query: 166 RCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP---PLRINIPD 222
           +CT RFPST I++QF SL ++ +     +  SS        P    L P   PL+I+IP+
Sbjct: 3   QCTFRFPSTVIKIQFTSLYHKEE---VKEEASS--------PPLRPLYPQISPLKIHIPE 51

Query: 223 HPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV- 276
            P      SP PSPTGTIS  NSCP SPRG  +       N+++DL +AA YAA   +  
Sbjct: 52  -PDLRSVVSPLPSPTGTISVPNSCPASPRGAGSSGYRFVHNITSDLQLAAEYAAKAASEQ 110

Query: 277 -VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
             +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 111 QADASGGDSPKDESKPPYSYAQLIVQAISSAPDRQLTLSGIYAHITKHYPYYRTADKGWQ 170



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 171 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 230

Query: 163 -LSSR 166
            LSSR
Sbjct: 231 PLSSR 235


>gi|431918208|gb|ELK17436.1| Forkhead box protein K1 [Pteropus alecto]
          Length = 1076

 Score =  143 bits (361), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/182 (49%), Positives = 113/182 (62%), Gaps = 32/182 (17%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRINI 220
           CT RFPST I++QF +L ++ + AP                  S L P      PLRI+I
Sbjct: 527 CTFRFPSTAIKIQFTALFHQEE-APA-----------------SPLRPLYPQISPLRIHI 568

Query: 221 PDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTN 275
           P+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   +
Sbjct: 569 PE-PDLRSLVSPVPSPTGTISVPNSCPASPRGAGSSGYRFVQNVTSDLQLAAEFAAKAAS 627

Query: 276 V--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKG 333
               +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKG
Sbjct: 628 EQQADTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKG 687

Query: 334 WQ 335
           WQ
Sbjct: 688 WQ 689



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 62/72 (86%), Gaps = 1/72 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 690 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 749

Query: 163 -LSSRCTLRFPS 173
            LSSR     P+
Sbjct: 750 PLSSRSAPASPT 761


>gi|348568330|ref|XP_003469951.1| PREDICTED: forkhead box protein K1-like [Cavia porcellus]
          Length = 617

 Score =  143 bits (361), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/183 (49%), Positives = 114/183 (62%), Gaps = 32/183 (17%)

Query: 166 RCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRIN 219
           RCT RFPST I++QF SL ++ + AP                  S L P      PL+I+
Sbjct: 71  RCTFRFPSTAIKIQFTSLYHKEE-APA-----------------SPLRPLYPQISPLKIH 112

Query: 220 IPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHT 274
           IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   
Sbjct: 113 IPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGSSGYRYVQNVTSDLQLAAEFAAKAA 171

Query: 275 NV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADK 332
           +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADK
Sbjct: 172 SEQQADTSGGDSPKDESKPPYSYAQLIVQAISSAPDRQLTLSGIYAHITKHYPYYRTADK 231

Query: 333 GWQ 335
           GWQ
Sbjct: 232 GWQ 234



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 235 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 294

Query: 163 -LSSR 166
            LSSR
Sbjct: 295 PLSSR 299


>gi|354467814|ref|XP_003496363.1| PREDICTED: forkhead box protein K1-like [Cricetulus griseus]
          Length = 638

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/207 (46%), Positives = 122/207 (58%), Gaps = 35/207 (16%)

Query: 145 AFRRRRQRGVPCFRA---PFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGV 201
           A+  +R  G  C  +   P  L   CT RFPST I++QF SL ++ + AP          
Sbjct: 68  AWSHKRNPGSRCPSSSPDPPELLRSCTFRFPSTAIKIQFTSLYHKEE-APA--------- 117

Query: 202 GVMGNPATSSLLP------PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHN 255
                   S L P      PL+I+IP+ P      SP PSPTGTIS  NSCP SPRG  +
Sbjct: 118 --------SPLRPLYPQISPLKIHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGS 168

Query: 256 R-----RNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHD 308
                 +NV++DL +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D
Sbjct: 169 SSYRFVQNVTSDLQLAAEFAAKAASEQQADTSGGDSPKDESKPPYSYAQLIVQAISSAQD 228

Query: 309 KQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 229 RQLTLSGIYAHITKHYPYYRTADKGWQ 255



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 256 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 315

Query: 163 -LSSR 166
            LSSR
Sbjct: 316 PLSSR 320


>gi|149755374|ref|XP_001492901.1| PREDICTED: forkhead box protein K1 [Equus caballus]
          Length = 585

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/182 (48%), Positives = 113/182 (62%), Gaps = 32/182 (17%)

Query: 167 CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRINI 220
           CT RFPST I++QF SL ++ + AP                  S L P      PL+I+I
Sbjct: 41  CTFRFPSTAIKIQFTSLYHQEE-APA-----------------SPLRPLYPHISPLKIHI 82

Query: 221 PDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTN 275
           P+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   +
Sbjct: 83  PE-PDLRSLVSPVPSPTGTISVPNSCPASPRGAGSSGYRFVQNVTSDLQLAAEFAAKAAS 141

Query: 276 V--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKG 333
               +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ IT++YPYYRTADKG
Sbjct: 142 EQQADTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITRHYPYYRTADKG 201

Query: 334 WQ 335
           WQ
Sbjct: 202 WQ 203



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 62/72 (86%), Gaps = 1/72 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 204 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 263

Query: 163 -LSSRCTLRFPS 173
            LSSR     P+
Sbjct: 264 PLSSRSAPASPT 275


>gi|395738072|ref|XP_003777025.1| PREDICTED: forkhead box protein K1 [Pongo abelii]
          Length = 803

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/183 (48%), Positives = 114/183 (62%), Gaps = 32/183 (17%)

Query: 166 RCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLRIN 219
           +CT RFPST I++QF SL ++ + AP                  S L P      PL+I+
Sbjct: 257 QCTFRFPSTAIKIQFTSLYHKEE-APA-----------------SPLRPLYPQISPLKIH 298

Query: 220 IPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHT 274
           IP+ P      SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   
Sbjct: 299 IPE-PDLRSMVSPVPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTSDLQLAAEFAAKAA 357

Query: 275 NV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADK 332
           +    +       +D+SKPP+SYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADK
Sbjct: 358 SEQQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADK 417

Query: 333 GWQ 335
           GWQ
Sbjct: 418 GWQ 420



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 421 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 480

Query: 163 -LSSR 166
            LSSR
Sbjct: 481 PLSSR 485


>gi|197245814|gb|AAI68919.1| Foxk2 protein [Rattus norvegicus]
          Length = 514

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/169 (52%), Positives = 104/169 (61%), Gaps = 16/169 (9%)

Query: 172 PSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSS 231
           PSTNI++ F +L +E       Q    S V  +  P  S    PL INIPD     IS  
Sbjct: 1   PSTNIKITFTALSSEKR---EKQEAPESPVKPV-QPHIS----PLTINIPDTMAHLIS-- 50

Query: 232 PFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSISQ 286
           P PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N          +
Sbjct: 51  PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPSDLNLMADNSQPE-NEKEASGGDSPK 109

Query: 287 DDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 110 DDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 158



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 159 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 218

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 219 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 256


>gi|444727695|gb|ELW68173.1| Forkhead box protein K2 [Tupaia chinensis]
          Length = 706

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/230 (41%), Positives = 114/230 (49%), Gaps = 61/230 (26%)

Query: 156 CFRAPFG--LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLL 213
           C + P G  +  RCTLRFPSTNI++ F +L +E       Q    S V     PA   + 
Sbjct: 103 CVQEPAGRDVHGRCTLRFPSTNIKITFTALASERT---EKQEAPVSPV----QPAQPHIS 155

Query: 214 PPLRINIPDHPHTEISSSPFPSPTGTIS-------------------------------- 241
           P L I+IPD     +S  P PSPTGTIS                                
Sbjct: 156 P-LTIHIPDTMAHLLS--PLPSPTGTISPPPSPLVSARLLPCGAAQLPGGADGERALVPL 212

Query: 242 -----------AANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSIS 285
                      AANSCP+SPRG  +      R + +DL + A  A    N          
Sbjct: 213 PALSSGPAVPSAANSCPSSPRGAGSSGYKTGRMIPSDLSLMADSAQPE-NEKEASGGDSP 271

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ IT+NYPYYRTADKGWQ
Sbjct: 272 KDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITRNYPYYRTADKGWQ 321



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 322 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLLEQAFRKRRPRGVPCFRTPLG 381

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 382 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 419


>gi|119610208|gb|EAW89802.1| forkhead box K2, isoform CRA_c [Homo sapiens]
          Length = 471

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 115 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 174

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 175 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 212



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 78/110 (70%), Gaps = 6/110 (5%)

Query: 231 SPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSIS 285
           SP PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N          
Sbjct: 6   SPLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPSDLNLMADNSQPE-NEKEASGGDSP 64

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 65  KDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 114


>gi|296476182|tpg|DAA18297.1| TPA: forkhead box K2-like [Bos taurus]
          Length = 359

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 4   NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 63

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 64  PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 101


>gi|157820649|ref|NP_001100545.1| forkhead box protein K2 [Rattus norvegicus]
 gi|149055128|gb|EDM06945.1| forkhead box K2 (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 400

 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 78/110 (70%), Gaps = 6/110 (5%)

Query: 231 SPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSIS 285
           SP PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N          
Sbjct: 6   SPLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPSDLNLMADNSQPE-NEKEASGGDSP 64

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 65  KDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 114



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 115 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 174

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 175 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 212


>gi|344250199|gb|EGW06303.1| Forkhead box protein K2 [Cricetulus griseus]
          Length = 448

 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 78/110 (70%), Gaps = 6/110 (5%)

Query: 231 SPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSIS 285
           SP PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N          
Sbjct: 6   SPLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPSDLNLMADNSQPE-NEKEASGGDSP 64

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 65  KDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 114



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 65/98 (66%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RR RGVPCFR P G
Sbjct: 115 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLVEQAFRKRRPRGVPCFRTPLG 174

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 175 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 212


>gi|119610206|gb|EAW89800.1| forkhead box K2, isoform CRA_a [Homo sapiens]
          Length = 425

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 115 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 174

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 175 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 212



 Score =  127 bits (319), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 78/110 (70%), Gaps = 6/110 (5%)

Query: 231 SPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSIS 285
           SP PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N          
Sbjct: 6   SPLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPSDLNLMADNSQPE-NEKEASGGDSP 64

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 65  KDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 114


>gi|193784107|dbj|BAG53651.1| unnamed protein product [Homo sapiens]
          Length = 488

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 59/72 (81%), Positives = 62/72 (86%), Gaps = 1/72 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 115 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 174

Query: 163 -LSSRCTLRFPS 173
            LSSR     P+
Sbjct: 175 PLSSRSAPASPT 186



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 82/112 (73%), Gaps = 7/112 (6%)

Query: 231 SPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV--VNHMSLS 283
           SP PSPTGTIS  NSCP SPRG  +      +NV++DL +AA +AA   +    +     
Sbjct: 3   SPVPSPTGTISVPNSCPASPRGAGSSSYRFVQNVTSDLQLAAEFAAKAASEQQADTSGGD 62

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
             +D+SKPP+SYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 63  SPKDESKPPFSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ 114


>gi|149055129|gb|EDM06946.1| forkhead box K2 (predicted), isoform CRA_b [Rattus norvegicus]
          Length = 163

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 78/110 (70%), Gaps = 6/110 (5%)

Query: 231 SPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSIS 285
           SP PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N          
Sbjct: 6   SPLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPSDLNLMADNSQPE-NEKEASGGDSP 64

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 65  KDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 114



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/40 (92%), Positives = 38/40 (95%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI 142
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+
Sbjct: 115 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLV 154


>gi|432100088|gb|ELK28981.1| Forkhead box protein K1 [Myotis davidii]
          Length = 649

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 175 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 234

Query: 163 -LSSR 166
            LSSR
Sbjct: 235 PLSSR 239



 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/164 (45%), Positives = 94/164 (57%), Gaps = 32/164 (19%)

Query: 164 SSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP------PLR 217
           S RCT RFPST I++QF +L ++ + AP                  S L P      PLR
Sbjct: 4   SIRCTFRFPSTVIKIQFTALYHQEE-APA-----------------SPLRPLYPQISPLR 45

Query: 218 INIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAA 272
           I+IP+ P      SP PSPTGTIS  NSCP SPRG         +NV++DL +AA +AA 
Sbjct: 46  IHIPE-PDLRSLVSPIPSPTGTISVPNSCPASPRGAGASSYRFVQNVTSDLQLAAEFAAK 104

Query: 273 HTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLS 314
             +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLS
Sbjct: 105 AASEQQADASGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLS 148


>gi|359077128|ref|XP_002696174.2| PREDICTED: forkhead box protein K2 [Bos taurus]
          Length = 644

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/98 (67%), Positives = 69/98 (70%), Gaps = 9/98 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 288 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPRGVPCFRTPLG 347

Query: 163 -LSSRCTLRFPSTNIRLQF--------QSLVNESDPAP 191
            LSSR     P+    L          +SL  E  PAP
Sbjct: 348 PLSSRSAPASPNHAGVLSAHSSGAQTPESLSREGSPAP 385



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 80/184 (43%), Gaps = 64/184 (34%)

Query: 89  FMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRR 148
           ++ C GKNGVFVDG                                           F+R
Sbjct: 145 YLRCLGKNGVFVDG------------------------------------------VFQR 162

Query: 149 RRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPA 208
           R   G P    P  L   CT RFPSTNI++ F +L +E       Q    S V  +    
Sbjct: 163 R---GAP----PLQLPRVCTFRFPSTNIKITFTALSSEKR---EKQEAPESPVKPV---- 208

Query: 209 TSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADL 263
             + + PL INIPD     IS  P PSPTGTISAANSCP+SPRG  +      R + +DL
Sbjct: 209 -QAHISPLTINIPDTMAHLIS--PLPSPTGTISAANSCPSSPRGAGSSGYKMGRVIPSDL 265

Query: 264 HMAA 267
           ++ A
Sbjct: 266 NLMA 269


>gi|301762173|ref|XP_002916516.1| PREDICTED: uncharacterized protein KIAA0415-like [Ailuropoda
           melanoleuca]
          Length = 1408

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 260 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 319

Query: 163 -LSSR 166
            LSSR
Sbjct: 320 PLSSR 324



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/253 (36%), Positives = 124/253 (49%), Gaps = 65/253 (25%)

Query: 147 RRRRQRGVPCFRAPFGL--SSRCTLRFPSTNIRLQFQSL--------------------- 183
           +R  Q   PC   P  +    RCT RFPST I++QF SL                     
Sbjct: 8   KRSLQANEPCSGTPAAILVDGRCTFRFPSTAIKIQFTSLYRQEEAPASPLRPLYPQISPL 67

Query: 184 ---VNESD--------PAPTGQSVSSSG-------VGVMG-----NPATSSLLPPLRINI 220
              + E D        P+PTG ++S  G       V V G      P  +    PL+ + 
Sbjct: 68  KIHIPEPDLRSLVSPVPSPTG-TISCWGLVPGGMWVAVEGARHPAKPGQAVTKLPLQDHA 126

Query: 221 PDHPHTE-------ISSSPFPSPTGTI----SAANSCPTSPRGLHNR-----RNVSADLH 264
              P  +       + +S     +G +    S  NSCP SPRG  +      +NV++DL 
Sbjct: 127 SHPPRVDGTRSLVALRASFRAGESGRVVSLHSVPNSCPASPRGAGSSGYRFVQNVTSDLQ 186

Query: 265 MAAHYAAAHTNV--VNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITK 322
           +AA +AA   +    +       +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK
Sbjct: 187 LAAEFAAKAASEQQADTSGGDSPKDESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITK 246

Query: 323 NYPYYRTADKGWQ 335
           +YPYYRTADKGWQ
Sbjct: 247 HYPYYRTADKGWQ 259


>gi|449281416|gb|EMC88496.1| hypothetical protein A306_02698, partial [Columba livia]
          Length = 1490

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 300 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 359

Query: 163 -LSSR 166
            LSSR
Sbjct: 360 PLSSR 364



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 7/102 (6%)

Query: 241 SAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPY 293
           S  NSCP SPRG  +       N+++DL +AA +AA   +    +       +D+SKPPY
Sbjct: 198 SVPNSCPASPRGAGSSGYRFVHNITSDLQLAAEFAAKAASEQQADASGGDSPKDESKPPY 257

Query: 294 SYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 258 SYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ 299



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 15/78 (19%)

Query: 166 RCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLP---PLRINIPD 222
           RCT RFPST I++QF SL ++ +      S           P    L P   PL+I+IP+
Sbjct: 1   RCTFRFPSTVIKIQFTSLYHKEEAKEEASS-----------PPLRPLYPQISPLKIHIPE 49

Query: 223 HPHTEISSSPFPSPTGTI 240
            P      SP PSPTGTI
Sbjct: 50  -PDLRSVVSPLPSPTGTI 66


>gi|51094716|gb|EAL23965.1| KIAA0415 gene product [Homo sapiens]
          Length = 1518

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 329 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 388

Query: 163 -LSSR 166
            LSSR
Sbjct: 389 PLSSR 393



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/103 (55%), Positives = 73/103 (70%), Gaps = 7/103 (6%)

Query: 240 ISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPP 292
           I   NSCP SPRG  +      +NV++DL +AA +AA   +    +       +D+SKPP
Sbjct: 226 ILVPNSCPASPRGAGSSSYRFVQNVTSDLQLAAEFAAKAASEQQADTSGGDSPKDESKPP 285

Query: 293 YSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +SYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 286 FSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ 328


>gi|351706061|gb|EHB08980.1| hypothetical protein GW7_16874, partial [Heterocephalus glaber]
          Length = 1507

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/65 (89%), Positives = 60/65 (92%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG
Sbjct: 318 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFG 377

Query: 163 -LSSR 166
            LSSR
Sbjct: 378 PLSSR 382



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/102 (56%), Positives = 73/102 (71%), Gaps = 7/102 (6%)

Query: 241 SAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNV--VNHMSLSISQDDSKPPY 293
           S  NSCP SPRG  +      +NV++DL +AA +AA   +    +       +D+SKPPY
Sbjct: 216 SVPNSCPASPRGAGSSGYRYVQNVTSDLQLAAEFAAKAASEQQADTSGGDSPKDESKPPY 275

Query: 294 SYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SYAQLIVQAV+SA D+QLTLSGIY+ IT++YPYYRTADKGWQ
Sbjct: 276 SYAQLIVQAVSSAPDRQLTLSGIYAHITRHYPYYRTADKGWQ 317



 Score = 45.8 bits (107), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 15/77 (19%)

Query: 166 RCTLRFPSTNIRLQFQSLVN-ESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHP 224
           RCT RFPST I++QF SL + E  PA   + +          P  S    PL+I+IP+ P
Sbjct: 1   RCTFRFPSTAIKIQFTSLYHKEEAPASPLRPL---------YPQIS----PLKIHIPE-P 46

Query: 225 HTEISSSPFPSPTGTIS 241
                 SP PSPTGTIS
Sbjct: 47  DLRSLVSPIPSPTGTIS 63


>gi|119610207|gb|EAW89801.1| forkhead box K2, isoform CRA_b [Homo sapiens]
          Length = 147

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/110 (60%), Positives = 78/110 (70%), Gaps = 6/110 (5%)

Query: 231 SPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYAAAHTNVVNHMSLSIS 285
           SP PSPTGTISAANSCP+SPRG  +      R + +DL++ A  +    N          
Sbjct: 6   SPLPSPTGTISAANSCPSSPRGAGSSGYKVGRVMPSDLNLMADNSQPE-NEKEASGGDSP 64

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +DDSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 65  KDDSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 114


>gi|195589437|ref|XP_002084458.1| GD12820 [Drosophila simulans]
 gi|194196467|gb|EDX10043.1| GD12820 [Drosophila simulans]
          Length = 577

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 126/294 (42%), Gaps = 108/294 (36%)

Query: 55  IGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLN 112
           IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD           
Sbjct: 173 IGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDD---------- 222

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                            F +RR         P  L  RC  RFP
Sbjct: 223 ---------------------------------FLQRRNVD------PLRLPQRCYFRFP 243

Query: 173 STNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSP 232
           ST IR++F+S V                      PATSS        I  H     S S 
Sbjct: 244 STEIRIEFESYV----------------------PATSSDA------IAGH-----SPSL 270

Query: 233 FPSPTGTISAANSCPTSPR----------GLHNRRNVSADLHMAAHYAAAHTNVVNHMSL 282
                GTISAANSCP SPR            +   N + DL     +    T   NH   
Sbjct: 271 VVGGVGTISAANSCPASPRQGFIQNQPNNYNNYGNNNTQDL-----FQTPSTASYNH--- 322

Query: 283 SISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYR-TADKGWQ 335
                + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+YPYYR   +KGWQ
Sbjct: 323 -----NEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHYPYYRKETNKGWQ 371



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLNRYFIKV RSQ+EPGK S   +D   E
Sbjct: 372 NSIRHNLSLNRYFIKVARSQDEPGKVSPSHMDNSRE 407


>gi|47214330|emb|CAG00839.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 512

 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/65 (87%), Positives = 58/65 (89%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQEEPGKGSFWRIDP SE KLIEQAFR+RR RGVPCFR P G
Sbjct: 196 NSIRHNLSLNRYFIKVARSQEEPGKGSFWRIDPSSESKLIEQAFRKRRPRGVPCFRTPVG 255

Query: 163 -LSSR 166
            LSSR
Sbjct: 256 PLSSR 260



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/99 (57%), Positives = 68/99 (68%), Gaps = 8/99 (8%)

Query: 242 AANSCPTSPRG--LHNRRNVSADLHMAAHYAAAHTNVVNHMSLSIS---QDDSKPPYSYA 296
           AANSCP+SPRG  L + R       +A+ +   ++   N    S     +DDSKPPYSYA
Sbjct: 100 AANSCPSSPRGAGLSSYRTGRV---VASDFIGDNSQSENDKEASGEDSPKDDSKPPYSYA 156

Query: 297 QLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           QLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 157 QLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 195



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 62/81 (76%), Gaps = 6/81 (7%)

Query: 28  IQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIF----- 82
           +   SG+A+A+L+GREFEY+++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF     
Sbjct: 4   VSGMSGSAVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFSAGEG 63

Query: 83  -FEHPNFFMTCNGKNGVFVDG 102
                 F++ C GKNGVFVDG
Sbjct: 64  GTGTGEFYLRCLGKNGVFVDG 84


>gi|195999644|ref|XP_002109690.1| hypothetical protein TRIADDRAFT_53967 [Trichoplax adhaerens]
 gi|190587814|gb|EDV27856.1| hypothetical protein TRIADDRAFT_53967 [Trichoplax adhaerens]
          Length = 224

 Score =  120 bits (302), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 118/246 (47%), Gaps = 68/246 (27%)

Query: 10  SDAWALLALKS--TSPSPSKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVN 67
           SDAWALL+LK+  +SP  S  + +  + IA+L+GREF+Y +R+   TIGRNS  GDVDV 
Sbjct: 20  SDAWALLSLKTPDSSPKRSSNEVEYNSPIARLEGREFDYYIRKSVTTIGRNSKLGDVDVT 79

Query: 68  MGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGK 127
           +G SSFISR H+EI  E P F++ C GKNG+F+DG  I H                    
Sbjct: 80  LGNSSFISRCHLEIRCEWPGFYLLCKGKNGIFIDG--IFH-------------------- 117

Query: 128 GSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLV--- 184
                                  +RG P    P    S C++RFPSTNIR+ F SL+   
Sbjct: 118 -----------------------RRGAPPVELP---QSSCSMRFPSTNIRVVFTSLMSNN 151

Query: 185 --------NESDPAPTGQSVSSSGVGVMGNP-ATSSLLPPLRINIPDHPHTEISSSPFPS 235
                    +S   P  QS  S      G   AT         NI     T  SS+P PS
Sbjct: 152 GHSSSGSPTKSAALPASQSQDSQQNNKAGTTQATRKEHSKAGSNI-----TYDSSNP-PS 205

Query: 236 PTGTIS 241
           PTGTIS
Sbjct: 206 PTGTIS 211


>gi|395860082|ref|XP_003802344.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein K2-like
           [Otolemur garnettii]
          Length = 657

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 153/311 (49%), Gaps = 54/311 (17%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGK 95
           +++L+GREFEY+++++ + I  NSS+  VD +MG SSFIS RH+EIF           G+
Sbjct: 58  LSQLEGREFEYLIKKRSVIIWHNSSQSSVDTSMGHSSFISXRHLEIFVPR------SGGR 111

Query: 96  NGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVP 155
            G   D  + +            PR       G  + +    +   ++  F+R    G P
Sbjct: 112 IGAAPDAAATQ------------PRPXS---GGDLYLLCLCEKAVFVDGVFQRL---GAP 153

Query: 156 CFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPP 215
               P  L   CT RF ST+I+  F     + +     Q+   S V      A       
Sbjct: 154 ----PPQLQRACTFRFRSTDIKTTFTVFSEKRE----KQAAPESPVK-----AVQMHFSA 200

Query: 216 LRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR-----RNVSADLHMAAHYA 270
           L INIPD     IS+ P    TGTI+A +SCP+S RG  +      + + +D ++ A  +
Sbjct: 201 LNINIPDSMAHLISTFP----TGTINADDSCPSSSRGEGSSGYKMGQVMPSDXNLMAENS 256

Query: 271 AAHTNVVNHMSLSISQDD-SKPPYSYAQ--LIVQAVASAHDKQLTLSGIY---SFITKNY 324
                     S   SQ D SK PYSYAQ  +IVQAV  A DK+LTL+ IY   + +TKN 
Sbjct: 257 RPENG--KEASGGGSQKDCSKLPYSYAQGIIIVQAVTMAPDKRLTLNKIYTPTTKMTKND 314

Query: 325 PYYRTADKGWQ 335
           PYYRTAD+G+Q
Sbjct: 315 PYYRTADEGYQ 325



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 36/65 (55%), Gaps = 21/65 (32%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF- 161
           NSIRH ++LNRYFIKV                     KLIEQAFR+RR  GV CFR P  
Sbjct: 326 NSIRHXVTLNRYFIKV--------------------LKLIEQAFRKRRPXGVACFRTPLV 365

Query: 162 GLSSR 166
            LSSR
Sbjct: 366 PLSSR 370


>gi|347964233|ref|XP_311187.5| AGAP000662-PA [Anopheles gambiae str. PEST]
 gi|347964235|ref|XP_003437051.1| AGAP000662-PB [Anopheles gambiae str. PEST]
 gi|347964237|ref|XP_003437052.1| AGAP000662-PC [Anopheles gambiae str. PEST]
 gi|333467435|gb|EAA06929.5| AGAP000662-PA [Anopheles gambiae str. PEST]
 gi|333467436|gb|EGK96554.1| AGAP000662-PB [Anopheles gambiae str. PEST]
 gi|333467437|gb|EGK96555.1| AGAP000662-PC [Anopheles gambiae str. PEST]
          Length = 689

 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 50/61 (81%), Positives = 57/61 (93%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQ+EPGKGSFWRIDP SE KLI+Q++R+RRQRG  CFR+PFG
Sbjct: 537 NSIRHNLSLNRYFIKVPRSQDEPGKGSFWRIDPSSELKLIDQSYRKRRQRGSQCFRSPFG 596

Query: 163 L 163
           +
Sbjct: 597 M 597



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 82/119 (68%), Gaps = 11/119 (9%)

Query: 228 ISSSPFPSPTGTISAANSCPTSPR-GLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQ 286
           +  S +PSPTGTISAANSCPTSPR  +H     S+  H   H  A+ T   N+ + + S+
Sbjct: 418 MGGSGYPSPTGTISAANSCPTSPRQNVHEFAQYSSSNHHHQHTPASVTGTTNNNNNNYSE 477

Query: 287 ---------DDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT-ADKGWQ 335
                    +  KPPYSYAQLIVQA++++ +KQLTLSGIYSFI+KNYPYYRT A+KGWQ
Sbjct: 478 FQAPATQSLESDKPPYSYAQLIVQAISASPEKQLTLSGIYSFISKNYPYYRTGANKGWQ 536



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 50/154 (32%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFE-HPNFFMTCNG 94
           I +L  ++   ++ +  I +GRNSS+  VD ++G +SFISR+H  I  + +  F + C  
Sbjct: 175 IGRLISKDNMLLISEDVIEVGRNSSKSQVDFHVGKNSFISRKHFIIQHDMNDEFTLFCLS 234

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           KNGVF+D                                            F R+     
Sbjct: 235 KNGVFID------------------------------------------NVFHRKSGE-- 250

Query: 155 PCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESD 188
                P+ L   C++RFPSTNI++QF++L+++++
Sbjct: 251 -----PYKLPKLCSIRFPSTNIKIQFENLIDQAN 279


>gi|312383490|gb|EFR28557.1| hypothetical protein AND_03387 [Anopheles darlingi]
          Length = 364

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/61 (81%), Positives = 56/61 (91%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQ+EPGKGSFWRIDP SE KLI+Q++R+RRQRG  CFR PFG
Sbjct: 238 NSIRHNLSLNRYFIKVPRSQDEPGKGSFWRIDPSSELKLIDQSYRKRRQRGSQCFRTPFG 297

Query: 163 L 163
           +
Sbjct: 298 M 298



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/132 (48%), Positives = 77/132 (58%), Gaps = 38/132 (28%)

Query: 233 FPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHY----------------------- 269
           +PSPTGTISAANSCPTSPR          ++H  A Y                       
Sbjct: 115 YPSPTGTISAANSCPTSPR---------QNVHDFAQYNNSHHHHHHQHHHNNSSSSSSHA 165

Query: 270 -AAAHTNVVNHMSLSI----SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
            A + TN  N+         S +  KPPYSYAQLIVQA++++ +KQLTLSGIYSFI+KNY
Sbjct: 166 VANSATNNNNYSEFQAPATQSLESDKPPYSYAQLIVQAISASPEKQLTLSGIYSFISKNY 225

Query: 325 PYYRT-ADKGWQ 335
           PYYRT A+KGWQ
Sbjct: 226 PYYRTGANKGWQ 237


>gi|360044179|emb|CCD81726.1| hypothetical protein Smp_145650 [Schistosoma mansoni]
          Length = 460

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 155/381 (40%), Gaps = 129/381 (33%)

Query: 34  TAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCN 93
           T  A+L   +  Y + + +ITIGR+S+   VD+++G SS++SR+H+EI ++     + C 
Sbjct: 7   TVYARLTMGKTIYEMVKHQITIGRSSAVYPVDIDIGCSSYVSRQHLEIIWKTDCLKLKCK 66

Query: 94  GKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           GKNG+F+D           + F        +P    F  I P                  
Sbjct: 67  GKNGIFID-----------QIF--------QPYSSQFLSIPPS----------------- 90

Query: 154 VPCFRAPFGLSSRCTLRFPSTNIRLQFQSLV----------------------------- 184
                        C LRFPST+I +Q +                                
Sbjct: 91  -------------CVLRFPSTSICIQIEQCFMSYEKSSSCADYVSSFELDSYGSRNSCSP 137

Query: 185 ----NESDPAPTGQSVSSSGVGVMGNPATS------SLLPPLRINIPDHPHTEISSSPFP 234
               N++ P  + ++ +  G     N  TS      +L+P  R    +  ++ +  +  P
Sbjct: 138 VNSDNQASPRISSKTFNFIGPSENLNTTTSRTRRKQALIPACRTTYGNVHYSNVQKNT-P 196

Query: 235 SPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNV------------------ 276
           S   +    N+  T+ RG ++     AD+H   +Y     N+                  
Sbjct: 197 SDASSCELKNTSDTTQRGENDTNRAEADIHKQTNYIGNSANIQYIHLKSKVDLPFSNVDS 256

Query: 277 ------------------VNHMSL--SISQDD--SKPPYSYAQLIVQAVASAHDKQLTLS 314
                             + H++   +I + D  +KPPYSYAQLI QA++S  D++LTLS
Sbjct: 257 ISDGITPIKSSQNSISSPIVHLATFPAIERGDQFTKPPYSYAQLIAQAISSQPDRKLTLS 316

Query: 315 GIYSFITKNYPYYRTADKGWQ 335
           GIY FI++NY YY+ ADKGWQ
Sbjct: 317 GIYDFISRNYSYYQLADKGWQ 337



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/52 (69%), Positives = 40/52 (76%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           NSIRHNLSLN  F+KVPRSQE+ GKG FWRIDP  E KL+  AFR+RR R  
Sbjct: 338 NSIRHNLSLNCQFVKVPRSQEDHGKGCFWRIDPEHEAKLLNIAFRKRRIRAC 389


>gi|156372375|ref|XP_001629013.1| predicted protein [Nematostella vectensis]
 gi|156216004|gb|EDO36950.1| predicted protein [Nematostella vectensis]
          Length = 102

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 77/143 (53%), Gaps = 49/143 (34%)

Query: 34  TAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCN 93
           T IAKL+GREFEY+VRQ RI IGRNSS G VDVNMG SSF+SRRH+EI F+ P+F+++CN
Sbjct: 9   TPIAKLEGREFEYLVRQNRIIIGRNSSLGSVDVNMGHSSFVSRRHLEIKFDSPSFYLSCN 68

Query: 94  GKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           GKNG+FVDG                                           F+RR    
Sbjct: 69  GKNGIFVDG------------------------------------------VFQRRAA-- 84

Query: 154 VPCFRAPFGLSSRCTLRFPSTNI 176
                 P  L S C LRFPSTN+
Sbjct: 85  -----PPMKLPSSCVLRFPSTNV 102


>gi|312372632|gb|EFR20554.1| hypothetical protein AND_19886 [Anopheles darlingi]
          Length = 816

 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 150/331 (45%), Gaps = 66/331 (19%)

Query: 17  ALKSTSPSPSKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISR 76
           AL + S +P++I   +   IA+L G E   ++ +  + +GRNSS   VD ++  SSF+SR
Sbjct: 37  ALSNDSAAPTRI---TSNFIARLIGPEQTLLIGEDMVVVGRNSSTSRVDFHVADSSFVSR 93

Query: 77  RHIEIF-FEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP 135
           +H  I   E  +F + C  KNG+F+D   I  ++                          
Sbjct: 94  KHYIIKRGEGNDFTLLCLSKNGLFLDNKHIPQSIQ------------------------- 128

Query: 136 GSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNES-DPAPTGQ 194
                                   P+ L   CT+RFPST + L+F++++ ++ D      
Sbjct: 129 ------------------------PYQLPPYCTIRFPSTRMELKFENMIGKTLDLGDALL 164

Query: 195 SVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLH 254
              S G   +G   T  +  P   ++ ++     SS   PSP  ++  A     +  G  
Sbjct: 165 PPGSLGSLNLGKGNTVPVSSPGNKSLSNNAKPS-SSRAKPSPY-SLQVAIPAAGAEAGWE 222

Query: 255 NRRNVSADLHMAAHYAAAHTNVVNHMSLSISQ---------DDSKPPYSYAQLIVQAVAS 305
            R +    +          T+  N  S+S  Q         ++ KPPYSY+QLIVQA+ S
Sbjct: 223 TREDAGRFMDSGYQSPTIATSANNSRSVSPRQGVSPATQNAEEEKPPYSYSQLIVQAIGS 282

Query: 306 AHDKQLTLSGIYSFITKNYPYYR-TADKGWQ 335
           + DK+LTLSGIY+ I K+YPY+R T +KGWQ
Sbjct: 283 SPDKELTLSGIYAAIMKSYPYFRNTTNKGWQ 313



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 39/50 (78%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN YFIK PR QE+ GKG  WR+D   E KLI Q+FR+RRQR
Sbjct: 314 NSIRHNLSLNPYFIKAPRRQEDSGKGCLWRLDYSVEAKLIGQSFRKRRQR 363


>gi|357628122|gb|EHJ77559.1| forkhead box protein K1 [Danaus plexippus]
          Length = 255

 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 59/71 (83%), Positives = 59/71 (83%), Gaps = 1/71 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIE AFR RR RGV  FRAPFG
Sbjct: 106 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPQSEGKLIELAFRPRRPRGV-QFRAPFG 164

Query: 163 LSSRCTLRFPS 173
           LSSR     PS
Sbjct: 165 LSSRSAPTSPS 175



 Score = 97.4 bits (241), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/50 (88%), Positives = 49/50 (98%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D++KPPYSYAQLIVQAVASA DKQLTLSGIYS+ITK+YPYYRTADKGWQ
Sbjct: 56  RDEAKPPYSYAQLIVQAVASAADKQLTLSGIYSYITKHYPYYRTADKGWQ 105


>gi|313234263|emb|CBY10330.1| unnamed protein product [Oikopleura dioica]
          Length = 550

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 131/328 (39%), Gaps = 116/328 (35%)

Query: 26  SKIQWKSGTAIAKLQGREFE----YMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEI 81
           SK +  S T I  L   E E    + V+ +R ++GR     + ++ +  S+ +SR+HIE 
Sbjct: 10  SKSKQVSRTVIPVLAELECEGIGNFEVKSERFSVGRGQ---NSNMPIASSNLVSRKHIEF 66

Query: 82  FF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEH 139
               E   F + CNGKNG+FVDG  I H  +L                       P    
Sbjct: 67  LRDREKGKFNLICNGKNGIFVDG--IFHKTTL-----------------------PDGN- 100

Query: 140 KLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSS 199
                               P  L+  C +RFPST I+++F+SL+N      T Q    S
Sbjct: 101 --------------------PIQLNESCLVRFPSTKIQIRFKSLLNRQQELFTKQEAVES 140

Query: 200 GVG------------VMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCP 247
             G             + N AT   LP     + D   T      FPSP           
Sbjct: 141 PSGFNSANNKEDNLDALDNLATKDDLP-----VNDENTTAKFRKKFPSP----------- 184

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
                                  A+  N            + KPPYSYAQLI+QA++SA 
Sbjct: 185 ----------------------GASDEN-----------SELKPPYSYAQLIIQAISSAE 211

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + QLTL+GIY +ITK YPYY+  DKGWQ
Sbjct: 212 ENQLTLAGIYQYITKFYPYYKNCDKGWQ 239



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/47 (87%), Positives = 43/47 (91%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLNRYFIKVPR QEEPGKGSFWRID G E KLIEQA+R+R
Sbjct: 240 NSIRHNLSLNRYFIKVPRGQEEPGKGSFWRIDQGCESKLIEQAWRKR 286


>gi|195128667|ref|XP_002008783.1| GI11623 [Drosophila mojavensis]
 gi|193920392|gb|EDW19259.1| GI11623 [Drosophila mojavensis]
          Length = 734

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/149 (45%), Positives = 89/149 (59%), Gaps = 17/149 (11%)

Query: 189 PAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPT 248
           P    Q +++ G G       +++  PL+I+IP     +   SP+ SPTGTISAANSCP 
Sbjct: 348 PPAASQLLTTGGDG-------AAIYAPLKISIPK----KEQKSPYLSPTGTISAANSCPA 396

Query: 249 SPR-GLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
           SPR G H  +  S       +      ++    S +    + KPPYSYAQLIVQA+++A 
Sbjct: 397 SPRQGFHQNQTNSY----NNYSNNNTQDLFQTPSTASYNHNEKPPYSYAQLIVQAISAAP 452

Query: 308 DKQLTLSGIYSFITKNYPYYR-TADKGWQ 335
           DKQLTLSGIYSFI K+YPYYR   +KGWQ
Sbjct: 453 DKQLTLSGIYSFIVKHYPYYRKETNKGWQ 481



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQ+EPGKGSFWRIDP S  KLI+ ++++RRQR    FR P+G
Sbjct: 482 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 541

Query: 163 L 163
           +
Sbjct: 542 M 542



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 61/156 (39%), Gaps = 56/156 (35%)

Query: 54  TIGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSL 111
            IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD          
Sbjct: 164 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDPERRAFFVQCLSKNGIFVDD--------- 214

Query: 112 NRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRF 171
                                             F +RR         P  L  RC  RF
Sbjct: 215 ----------------------------------FLQRRNVD------PLRLPQRCFFRF 234

Query: 172 PSTNIRLQFQSLVNE-----SDPAPTGQSVSSSGVG 202
           PST IR++F+S V+      SD AP   S + SG  
Sbjct: 235 PSTEIRIEFESFVSAPVDIVSDAAPVLSSPTVSGTA 270


>gi|195379538|ref|XP_002048535.1| GJ11303 [Drosophila virilis]
 gi|194155693|gb|EDW70877.1| GJ11303 [Drosophila virilis]
          Length = 694

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/128 (50%), Positives = 82/128 (64%), Gaps = 10/128 (7%)

Query: 210 SSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPR-GLHNRRNVSADLHMAAH 268
           +++  PL+I+IP     +   SP+ SPTGTISAANSCP SPR G H  +  S       +
Sbjct: 364 AAIYSPLKISIPK----KEQKSPYLSPTGTISAANSCPASPRQGFHQNQTNSY----NNY 415

Query: 269 YAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYR 328
                 ++    S +    + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+YPYYR
Sbjct: 416 SNNNTQDLFQTPSTASYNHNEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHYPYYR 475

Query: 329 -TADKGWQ 335
              +KGWQ
Sbjct: 476 KETNKGWQ 483



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 64/167 (38%), Gaps = 52/167 (31%)

Query: 54  TIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN--FFMTCNGKNGVFVDGNSIRHNLSL 111
            IGRNSS   V  N+  ++ +SR+H ++ +E     FF+ C  KNG+FVD          
Sbjct: 165 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYEPERRAFFVQCLSKNGIFVDD--------- 215

Query: 112 NRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRF 171
                                             F +RR         P  L  RC  RF
Sbjct: 216 ----------------------------------FLQRRNVD------PLRLPQRCFFRF 235

Query: 172 PSTNIRLQFQSLVNE-SDPAPTGQSVSSSGVGVMGNPATSSLLPPLR 217
           PST IR++F+S V   +D  P    V SS   V    A   + PP R
Sbjct: 236 PSTEIRIEFESFVAAPADITPEVAPVLSSPAAVGTAGAHVIITPPPR 282



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLNRYFIKV RSQ+EPGK S   +D   E
Sbjct: 484 NSIRHNLSLNRYFIKVARSQDEPGKVSPSHMDNSRE 519


>gi|442631651|ref|NP_001261702.1| forkhead domain 68A, isoform O [Drosophila melanogaster]
 gi|440215623|gb|AGB94396.1| forkhead domain 68A, isoform O [Drosophila melanogaster]
          Length = 745

 Score =  108 bits (270), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 9/122 (7%)

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHT 274
           PL+I+IP     +   SP+ SPTGTISAANSCP SPR    +  +    +   +Y   +T
Sbjct: 385 PLKISIPK----KEQKSPYLSPTGTISAANSCPASPR----QGFIQNQPNNYNNYGNNNT 436

Query: 275 NVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYR-TADKG 333
           ++    S +    + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+YPYYR   +KG
Sbjct: 437 DLFQTPSTASYNHNEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHYPYYRKETNKG 496

Query: 334 WQ 335
           WQ
Sbjct: 497 WQ 498



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQ+EPGKGSFWRIDP S  KLI+ ++++RRQR    FR P+G
Sbjct: 499 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 558

Query: 163 L 163
           +
Sbjct: 559 M 559



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 52/132 (39%), Gaps = 51/132 (38%)

Query: 55  IGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLN 112
           IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD           
Sbjct: 173 IGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDD---------- 222

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                            F +RR         P  L  RC  RFP
Sbjct: 223 ---------------------------------FLQRRNVD------PLRLPQRCYFRFP 243

Query: 173 STNIRLQFQSLV 184
           ST IR++F+S V
Sbjct: 244 STEIRIEFESYV 255


>gi|195166487|ref|XP_002024066.1| GL22763 [Drosophila persimilis]
 gi|194107421|gb|EDW29464.1| GL22763 [Drosophila persimilis]
          Length = 742

 Score =  107 bits (268), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/127 (51%), Positives = 81/127 (63%), Gaps = 18/127 (14%)

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPR-GLHNRRNVSADLHMAAH----Y 269
           PL+I+IP     +   SP+ SPTGTISAANSCP SPR G H  +  + + +   +    +
Sbjct: 379 PLKISIPK----KEQKSPYLSPTGTISAANSCPASPRQGFHQNQPNNYNNYSNNNTQDLF 434

Query: 270 AAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT 329
               T   NH        + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+YPYYR 
Sbjct: 435 QTPSTASYNH--------NEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHYPYYRK 486

Query: 330 -ADKGWQ 335
             +KGWQ
Sbjct: 487 ETNKGWQ 493



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQ+EPGKGSFWRIDP S  KLI+ ++++RRQR    FR P+G
Sbjct: 494 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 553

Query: 163 L 163
           +
Sbjct: 554 M 554



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 52/132 (39%), Gaps = 51/132 (38%)

Query: 55  IGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLN 112
           IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD           
Sbjct: 162 IGRNSSTSLVHFNVAENNLVSRKHFQVLYDLEVRAFFVQCLSKNGIFVDD---------- 211

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                            F +RR         P  L  RC  RFP
Sbjct: 212 ---------------------------------FLQRRNVD------PMRLPPRCYFRFP 232

Query: 173 STNIRLQFQSLV 184
           ST IR++F+S V
Sbjct: 233 STEIRIEFESYV 244


>gi|79158583|gb|AAI07966.1| Unknown (protein for IMAGE:7227781), partial [Danio rerio]
          Length = 296

 Score =  107 bits (268), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 101/204 (49%), Gaps = 67/204 (32%)

Query: 32  SGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPN---- 87
           +G  +A+L+GREFEY+++++ +T+GRNSS+G VDV+MG SSFISRRH+EIF    +    
Sbjct: 60  AGPVVARLEGREFEYLMKKRSVTVGRNSSQGSVDVSMGHSSFISRRHLEIFSAGEDGAGE 119

Query: 88  FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           F++ C GKNGVFVDG                                          AF+
Sbjct: 120 FYLRCLGKNGVFVDG------------------------------------------AFQ 137

Query: 148 RRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNP 207
           R   RG P    P  L   C LRFPSTNI++ F +L ++               G +  P
Sbjct: 138 R---RGAP----PLQLPRACRLRFPSTNIKISFTALCSDQRECR----------GALEVP 180

Query: 208 ATSSLLPPLRINIPD---HPHTEI 228
             +  + PL I+IP+   H HT +
Sbjct: 181 VKAQ-ISPLTISIPENITHTHTHL 203


>gi|159163712|pdb|2A3S|A Chain A, Solution Structure And Dynamics Of Dna-Binding Domain Of
           Myocyte Nuclear Factor
 gi|159163972|pdb|2D2W|A Chain A, Solution Structure And Dynamics Of The Dna-Binding Domain
           Of Myocyte Nuclear Factor
          Length = 101

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 48/52 (92%), Positives = 50/52 (96%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV
Sbjct: 49  NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGV 100



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/48 (83%), Positives = 46/48 (95%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 1   ESKPPYSYAQLIVQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQ 48


>gi|9738905|gb|AAF97842.1|U37276_1 winged helix protein CWH-5, partial [Gallus gallus]
          Length = 108

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/52 (92%), Positives = 50/52 (96%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KL+EQAFR+RRQRGV
Sbjct: 56  NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASEAKLVEQAFRKRRQRGV 107



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/50 (82%), Positives = 48/50 (96%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D+SKPPYSYAQLIVQA++SA D+QLTLSGIY+ ITK+YPYYRTADKGWQ
Sbjct: 6   KDESKPPYSYAQLIVQAISSAPDRQLTLSGIYAHITKHYPYYRTADKGWQ 55


>gi|442631649|ref|NP_001261701.1| forkhead domain 68A, isoform N [Drosophila melanogaster]
 gi|440215622|gb|AGB94395.1| forkhead domain 68A, isoform N [Drosophila melanogaster]
          Length = 760

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/132 (50%), Positives = 79/132 (59%), Gaps = 28/132 (21%)

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPR----------GLHNRRNVSADLH 264
           PL+I+IP     +   SP+ SPTGTISAANSCP SPR            +   N + DL 
Sbjct: 385 PLKISIPK----KEQKSPYLSPTGTISAANSCPASPRQGFIQNQPNNYNNYGNNNTQDL- 439

Query: 265 MAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
               +    T   NH        + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+Y
Sbjct: 440 ----FQTPSTASYNH--------NEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHY 487

Query: 325 PYYRT-ADKGWQ 335
           PYYR   +KGWQ
Sbjct: 488 PYYRKETNKGWQ 499



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQ+EPGKGSFWRIDP S  KLI+ ++++RRQR    FR P+G
Sbjct: 500 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 559

Query: 163 L 163
           +
Sbjct: 560 M 560



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 51/132 (38%)

Query: 55  IGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLN 112
           IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD    R N+   
Sbjct: 173 IGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDDFLQRRNVD-- 230

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                                          P  L  RC  RFP
Sbjct: 231 -----------------------------------------------PLRLPQRCYFRFP 243

Query: 173 STNIRLQFQSLV 184
           ST IR++F+S V
Sbjct: 244 STEIRIEFESYV 255


>gi|442631653|ref|NP_001261703.1| forkhead domain 68A, isoform P [Drosophila melanogaster]
 gi|440215624|gb|AGB94397.1| forkhead domain 68A, isoform P [Drosophila melanogaster]
          Length = 745

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/132 (50%), Positives = 79/132 (59%), Gaps = 28/132 (21%)

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPR----------GLHNRRNVSADLH 264
           PL+I+IP     +   SP+ SPTGTISAANSCP SPR            +   N + DL 
Sbjct: 385 PLKISIPK----KEQKSPYLSPTGTISAANSCPASPRQGFIQNQPNNYNNYGNNNTQDL- 439

Query: 265 MAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
               +    T   NH        + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+Y
Sbjct: 440 ----FQTPSTASYNH--------NEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHY 487

Query: 325 PYYR-TADKGWQ 335
           PYYR   +KGWQ
Sbjct: 488 PYYRKETNKGWQ 499



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQ+EPGKGSFWRIDP S  KLI+ ++++RRQR    FR P+G
Sbjct: 500 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 559

Query: 163 L 163
           +
Sbjct: 560 M 560



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 52/132 (39%), Gaps = 51/132 (38%)

Query: 55  IGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLN 112
           IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD           
Sbjct: 173 IGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDD---------- 222

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                            F +RR         P  L  RC  RFP
Sbjct: 223 ---------------------------------FLQRRNVD------PLRLPQRCYFRFP 243

Query: 173 STNIRLQFQSLV 184
           ST IR++F+S V
Sbjct: 244 STEIRIEFESYV 255


>gi|281366038|ref|NP_648440.2| forkhead domain 68A, isoform G [Drosophila melanogaster]
 gi|281366040|ref|NP_729673.2| forkhead domain 68A, isoform H [Drosophila melanogaster]
 gi|281366042|ref|NP_729674.2| forkhead domain 68A, isoform I [Drosophila melanogaster]
 gi|281366044|ref|NP_729675.2| forkhead domain 68A, isoform J [Drosophila melanogaster]
 gi|68051287|gb|AAY84907.1| LD11294p [Drosophila melanogaster]
 gi|272455146|gb|AAN11900.2| forkhead domain 68A, isoform G [Drosophila melanogaster]
 gi|272455147|gb|AAF50093.3| forkhead domain 68A, isoform H [Drosophila melanogaster]
 gi|272455148|gb|AAN11901.2| forkhead domain 68A, isoform I [Drosophila melanogaster]
 gi|272455149|gb|AAF50094.3| forkhead domain 68A, isoform J [Drosophila melanogaster]
          Length = 746

 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/132 (50%), Positives = 79/132 (59%), Gaps = 28/132 (21%)

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPR----------GLHNRRNVSADLH 264
           PL+I+IP     +   SP+ SPTGTISAANSCP SPR            +   N + DL 
Sbjct: 385 PLKISIPK----KEQKSPYLSPTGTISAANSCPASPRQGFIQNQPNNYNNYGNNNTQDL- 439

Query: 265 MAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
               +    T   NH        + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+Y
Sbjct: 440 ----FQTPSTASYNH--------NEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHY 487

Query: 325 PYYR-TADKGWQ 335
           PYYR   +KGWQ
Sbjct: 488 PYYRKETNKGWQ 499



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQ+EPGKGSFWRIDP S  KLI+ ++++RRQR    FR P+G
Sbjct: 500 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 559

Query: 163 L 163
           +
Sbjct: 560 M 560



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 52/132 (39%), Gaps = 51/132 (38%)

Query: 55  IGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLN 112
           IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD           
Sbjct: 173 IGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDD---------- 222

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                            F +RR         P  L  RC  RFP
Sbjct: 223 ---------------------------------FLQRRNVD------PLRLPQRCYFRFP 243

Query: 173 STNIRLQFQSLV 184
           ST IR++F+S V
Sbjct: 244 STEIRIEFESYV 255


>gi|195999646|ref|XP_002109691.1| hypothetical protein TRIADDRAFT_21017 [Trichoplax adhaerens]
 gi|190587815|gb|EDV27857.1| hypothetical protein TRIADDRAFT_21017 [Trichoplax adhaerens]
          Length = 137

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/56 (82%), Positives = 51/56 (91%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFR 158
           NSIRHNLSLNRYF+KVPRS +EPGKGSFW++D  SE KL+EQAFRRRRQRGVP FR
Sbjct: 63  NSIRHNLSLNRYFLKVPRSPDEPGKGSFWKLDSMSEQKLMEQAFRRRRQRGVPSFR 118



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 41/47 (87%), Positives = 44/47 (93%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SKPPYSYAQLIVQA+ S  DKQLTLSGIYS+IT+NYPYYRTADKGWQ
Sbjct: 16  SKPPYSYAQLIVQAIMSESDKQLTLSGIYSYITRNYPYYRTADKGWQ 62


>gi|156372377|ref|XP_001629014.1| predicted protein [Nematostella vectensis]
 gi|156216005|gb|EDO36951.1| predicted protein [Nematostella vectensis]
          Length = 101

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 44/52 (84%), Positives = 48/52 (92%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           NSIRHNLSLNRYF+KVPR+Q+EPGKGSFWRIDP  E KL EQAFR+RRQRGV
Sbjct: 50  NSIRHNLSLNRYFVKVPRAQDEPGKGSFWRIDPSCEQKLAEQAFRKRRQRGV 101



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/49 (85%), Positives = 45/49 (91%)

Query: 287 DDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D KPPYSYAQLIVQA+ SA DKQLTLSGIY+ ITKNYPYYRTADKGWQ
Sbjct: 1   EDGKPPYSYAQLIVQAILSATDKQLTLSGIYAHITKNYPYYRTADKGWQ 49


>gi|99031909|pdb|2C6Y|A Chain A, Crystal Structure Of Interleukin Enhancer-Binding Factor 1
           Bound To Dna
 gi|99031910|pdb|2C6Y|B Chain B, Crystal Structure Of Interleukin Enhancer-Binding Factor 1
           Bound To Dna
          Length = 111

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/50 (92%), Positives = 47/50 (94%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR R
Sbjct: 62  NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 111



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/48 (85%), Positives = 44/48 (91%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           DSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 14  DSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 61


>gi|253722939|pdb|1JXS|A Chain A, Solution Structure Of The Dna-Binding Domain Of
           Interleukin Enhancer Binding Factor
          Length = 98

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/50 (92%), Positives = 47/50 (94%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP SE KLIEQAFR+RR R
Sbjct: 49  NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPASESKLIEQAFRKRRPR 98



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/48 (85%), Positives = 44/48 (91%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           DSKPPYSYAQLIVQA+  A DKQLTL+GIY+ ITKNYPYYRTADKGWQ
Sbjct: 1   DSKPPYSYAQLIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQ 48


>gi|47217948|emb|CAG02231.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 680

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 104/214 (48%), Gaps = 47/214 (21%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHP------NFF 89
           +A+L+GREFEYM++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF          +F+
Sbjct: 11  VARLEGREFEYMMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTASDDGAGGGDFY 70

Query: 90  MTCNGKNGVFVDGNSIRHN---LSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           + C GKNGVFVDG  +R     L L R  + +  +Q                      + 
Sbjct: 71  LRCLGKNGVFVDGVFLRRGAPPLQLPRIRLLLAHTQV---------------------SA 109

Query: 147 RRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           RRR+    P  R          L+      +      V + +    G++ SS        
Sbjct: 110 RRRKHCSWPSRR-------HVHLQVSQHQHQDHLHGSVQQQE----GEARSSESPVKAVQ 158

Query: 207 PATSSLLPPLRINIPDHPHTEISSSPFPSPTGTI 240
           P  S    PL INIPD  +     SP PSPTGTI
Sbjct: 159 PQIS----PLTINIPD--NIAHLMSPLPSPTGTI 186


>gi|195441602|ref|XP_002068594.1| GK20555 [Drosophila willistoni]
 gi|194164679|gb|EDW79580.1| GK20555 [Drosophila willistoni]
          Length = 812

 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQ+EPGKGSFWRIDP S  KLI+ ++++RRQR    FR P+G
Sbjct: 542 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 601

Query: 163 L 163
           +
Sbjct: 602 M 602



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/138 (43%), Positives = 81/138 (58%), Gaps = 24/138 (17%)

Query: 204 MGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPR-GLHNRRNVSAD 262
           +G+ A + +  PL+I+IP     +   SP+ SPTG      +CP SPR G H  +  + +
Sbjct: 422 VGDGAVAGIYSPLKISIPK----KEQKSPYLSPTG------NCPASPRQGFHQNQPNNYN 471

Query: 263 LHMAAH----YAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYS 318
            +   +    +    T   NH        + KPPYSYAQLIVQA+++A DKQLTLSGIYS
Sbjct: 472 NYSNNNTQDLFQTPSTASYNH--------NEKPPYSYAQLIVQAISAAPDKQLTLSGIYS 523

Query: 319 FITKNYPYYRT-ADKGWQ 335
           FI K+YPYYR   +KGWQ
Sbjct: 524 FIVKHYPYYRKETNKGWQ 541



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 55/150 (36%)

Query: 55  IGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLN 112
           IGRNSS   V  N+  ++ +SR+H ++ +  E   F++ C  KNG+FVD           
Sbjct: 182 IGRNSSTSLVHFNVAENNLVSRKHFQVLYNLEQRAFYVQCLSKNGIFVDD---------- 231

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                            F +RR       R P     RC  RFP
Sbjct: 232 ---------------------------------FLQRRNAD--NLRLP----QRCYFRFP 252

Query: 173 STNIRLQFQSLVNESDPAPTGQSVSSSGVG 202
           ST IR++F+S V    P P   +  ++ VG
Sbjct: 253 STEIRIEFESYV----PGPGNYTTDAASVG 278


>gi|195493344|ref|XP_002094376.1| GE20234 [Drosophila yakuba]
 gi|194180477|gb|EDW94088.1| GE20234 [Drosophila yakuba]
          Length = 730

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQ+EPGKGSFWRIDP S  KLI+ ++++RRQR    FR P+G
Sbjct: 489 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 548

Query: 163 L 163
           +
Sbjct: 549 M 549



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 73/132 (55%), Gaps = 34/132 (25%)

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPR----------GLHNRRNVSADLH 264
           PL+I+IP     +   SP+ SPTG      +CP SPR            +   N + DL 
Sbjct: 380 PLKISIPK----KEQKSPYLSPTG------NCPASPRQGFIQNQPNNYNNYGNNNTQDL- 428

Query: 265 MAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
               +    T   NH        + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+Y
Sbjct: 429 ----FQTPSTASYNH--------NEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHY 476

Query: 325 PYYR-TADKGWQ 335
           PYYR   +KGWQ
Sbjct: 477 PYYRKETNKGWQ 488



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 51/133 (38%)

Query: 54  TIGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSL 111
            IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD    R N+  
Sbjct: 170 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDDFLQRRNVD- 228

Query: 112 NRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRF 171
                                                           P  L  RC  RF
Sbjct: 229 ------------------------------------------------PLRLPQRCYFRF 240

Query: 172 PSTNIRLQFQSLV 184
           PST IR++F+S V
Sbjct: 241 PSTEIRIEFESYV 253


>gi|24662518|ref|NP_729672.1| forkhead domain 68A, isoform K [Drosophila melanogaster]
 gi|10728000|gb|AAF50092.2| forkhead domain 68A, isoform K [Drosophila melanogaster]
 gi|60202497|gb|AAX14634.1| fork head transcription factor long isoform [Drosophila
           melanogaster]
          Length = 740

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQ+EPGKGSFWRIDP S  KLI+ ++++RRQR    FR P+G
Sbjct: 494 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 553

Query: 163 L 163
           +
Sbjct: 554 M 554



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 73/132 (55%), Gaps = 34/132 (25%)

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPR----------GLHNRRNVSADLH 264
           PL+I+IP     +   SP+ SPTG      +CP SPR            +   N + DL 
Sbjct: 385 PLKISIPK----KEQKSPYLSPTG------NCPASPRQGFIQNQPNNYNNYGNNNTQDL- 433

Query: 265 MAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
               +    T   NH        + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+Y
Sbjct: 434 ----FQTPSTASYNH--------NEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHY 481

Query: 325 PYYR-TADKGWQ 335
           PYYR   +KGWQ
Sbjct: 482 PYYRKETNKGWQ 493



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 52/132 (39%), Gaps = 51/132 (38%)

Query: 55  IGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLN 112
           IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD           
Sbjct: 173 IGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDD---------- 222

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                            F +RR         P  L  RC  RFP
Sbjct: 223 ---------------------------------FLQRRNVD------PLRLPQRCYFRFP 243

Query: 173 STNIRLQFQSLV 184
           ST IR++F+S V
Sbjct: 244 STEIRIEFESYV 255


>gi|194868888|ref|XP_001972350.1| GG13935 [Drosophila erecta]
 gi|190654133|gb|EDV51376.1| GG13935 [Drosophila erecta]
          Length = 732

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQ+EPGKGSFWRIDP S  KLI+ ++++RRQR    FR P+G
Sbjct: 490 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 549

Query: 163 L 163
           +
Sbjct: 550 M 550



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 73/132 (55%), Gaps = 34/132 (25%)

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPR----------GLHNRRNVSADLH 264
           PL+I+IP     +   SP+ SPTG      +CP SPR            +   N + DL 
Sbjct: 381 PLKISIPK----KEQKSPYLSPTG------NCPASPRQGFIQNQPNNYNNYGNNNTQDL- 429

Query: 265 MAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
               +    T   NH        + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+Y
Sbjct: 430 ----FQTPSTASYNH--------NEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHY 477

Query: 325 PYYRT-ADKGWQ 335
           PYYR   +KGWQ
Sbjct: 478 PYYRKETNKGWQ 489



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 59/146 (40%), Gaps = 55/146 (37%)

Query: 54  TIGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSL 111
            IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD          
Sbjct: 171 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDD--------- 221

Query: 112 NRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRF 171
                                             F +RR         P  L  RC  RF
Sbjct: 222 ----------------------------------FLQRRNVD------PLRLPQRCYFRF 241

Query: 172 PSTNIRLQFQSLVNESDPAPTGQSVS 197
           PST IR++F+S V    PAP+  +++
Sbjct: 242 PSTEIRIEFESYV----PAPSSDAIA 263


>gi|195020452|ref|XP_001985198.1| GH14639 [Drosophila grimshawi]
 gi|193898680|gb|EDV97546.1| GH14639 [Drosophila grimshawi]
          Length = 733

 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQ+EPGKGSFWRIDP S  KLI+ ++++RRQR    FR P+G
Sbjct: 488 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 547

Query: 163 L 163
           +
Sbjct: 548 M 548



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/158 (42%), Positives = 86/158 (54%), Gaps = 39/158 (24%)

Query: 189 PAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPT 248
           PA   Q ++  GV       T+++  PL+I+IP     +   SP+ SPTG      +CP 
Sbjct: 358 PAAATQLLAGGGVD-----GTAAIYSPLKISIPK----KEQKSPYLSPTG------NCPA 402

Query: 249 SPR-GLHNRR---------NVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQL 298
           SPR G H  +         N + DL     +    T   NH        + KPPYSYAQL
Sbjct: 403 SPRQGFHQNQANSYNNYSNNNTQDL-----FQTPSTASYNH--------NEKPPYSYAQL 449

Query: 299 IVQAVASAHDKQLTLSGIYSFITKNYPYYR-TADKGWQ 335
           IVQA+++A DKQLTLSGIYSFI K+YPYYR   +KGWQ
Sbjct: 450 IVQAISAAPDKQLTLSGIYSFIVKHYPYYRKETNKGWQ 487



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 52/133 (39%), Gaps = 51/133 (38%)

Query: 54  TIGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSL 111
            IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD          
Sbjct: 158 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDPERRAFFVQCLSKNGIFVDD--------- 208

Query: 112 NRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRF 171
                                             F +RR         P  L  RC  RF
Sbjct: 209 ----------------------------------FLQRRNVD------PLRLPQRCFFRF 228

Query: 172 PSTNIRLQFQSLV 184
           PST IR++F+S V
Sbjct: 229 PSTEIRIEFESFV 241


>gi|60202495|gb|AAX14633.1| fork head transcription factor short isoform [Drosophila
           melanogaster]
          Length = 654

 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFIKV RSQ+EPGKGSFWRIDP S  KLI+ ++++RRQR    FR P+G
Sbjct: 494 NSIRHNLSLNRYFIKVARSQDEPGKGSFWRIDPDSGAKLIDHSYKKRRQRSSQGFRPPYG 553

Query: 163 L 163
           +
Sbjct: 554 M 554



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 73/132 (55%), Gaps = 34/132 (25%)

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPR----------GLHNRRNVSADLH 264
           PL+I+IP     +   SP+ SPTG      +CP SPR            +   N + DL 
Sbjct: 385 PLKISIP----KKEQKSPYLSPTG------NCPASPRQGFIQNQPNNYNNYGNNNTQDL- 433

Query: 265 MAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
               +    T   NH        + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+Y
Sbjct: 434 ----FQTPSTASYNH--------NEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHY 481

Query: 325 PYYR-TADKGWQ 335
           PYYR   +KGWQ
Sbjct: 482 PYYRKETNKGWQ 493



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 51/133 (38%), Gaps = 51/133 (38%)

Query: 54  TIGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSL 111
            IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD    R N+  
Sbjct: 172 VIGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDDFLQRRNVD- 230

Query: 112 NRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRF 171
                                                           P  L  RC  RF
Sbjct: 231 ------------------------------------------------PLRLPQRCYFRF 242

Query: 172 PSTNIRLQFQSLV 184
           PST IR++F+S V
Sbjct: 243 PSTEIRIEFESYV 255


>gi|393907512|gb|EJD74679.1| forkhead box protein [Loa loa]
          Length = 1176

 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 139/320 (43%), Gaps = 104/320 (32%)

Query: 46  YMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFE-HPNFF-MTCNGKNGVFVDGN 103
           + V +K + IGR+S+    DV +  S++ISR H+ +++   PN + +  NGKNGV V  N
Sbjct: 33  FAVSKKVVVIGRDSANSITDVVVQESNYISRCHVILYYTGQPNRWNIKVNGKNGVLV--N 90

Query: 104 SIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGL 163
            I +                                       R  R + +P        
Sbjct: 91  EIMYG--------------------------------------RSERTQSIPF------- 105

Query: 164 SSRCTLRFPSTNIRLQF-------------QSLV----NESDPAPT-GQSVSSSGV--GV 203
              C  RFPST+I + F              S V    NE D A +    +SS GV  G 
Sbjct: 106 --SCIFRFPSTHIVMLFCGIEPLSGTANSPDSFVRITENEVDSAVSLAAMLSSQGVTPGS 163

Query: 204 MGNPATSSLL---PPLRIN--IPDHPHTEISSSPFPSPTG---TISAANSCPTSPRGLHN 255
           M     +  L   P    N  +    ++E + +P  S  G   +I ++ S PTS     +
Sbjct: 164 MEESGKTFCLSDKPNTGENTGVSTAEYSESTHTPSDSSAGANVSIGSSTSIPTS----DS 219

Query: 256 RRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSG 315
            RN   D      Y A+               D KPPYSYAQLIVQA+ S+ D+Q+TLSG
Sbjct: 220 DRNCKED------YEAS---------------DGKPPYSYAQLIVQAILSSPDQQMTLSG 258

Query: 316 IYSFITKNYPYYRTADKGWQ 335
           IY++IT  YP+YR+ADKGWQ
Sbjct: 259 IYNYITSRYPWYRSADKGWQ 278



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 42/50 (84%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLNRYF+KV RSQEEPGKGSFWR++  +  + +E A+++R+ +
Sbjct: 279 NSIRHNLSLNRYFVKVARSQEEPGKGSFWRMESSAALRNVELAYKKRKPK 328


>gi|410903119|ref|XP_003965041.1| PREDICTED: forkhead box protein K2-like [Takifugu rubripes]
          Length = 98

 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 6/79 (7%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHP------NFF 89
           +A+L+GREFEYM++++ +TIGRNSS+G VDV+MG SSFISRRH+EIF          +F+
Sbjct: 11  VARLEGREFEYMMKKRSVTIGRNSSQGSVDVSMGHSSFISRRHLEIFTASDDGTGSGDFY 70

Query: 90  MTCNGKNGVFVDGNSIRHN 108
           + C GKNGVFVDG  +R  
Sbjct: 71  LRCLGKNGVFVDGVFLRRG 89


>gi|83779634|gb|ABC47633.1| forkhead box protein K1 [Salmo salar]
          Length = 152

 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 58/69 (84%), Gaps = 1/69 (1%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHP-NFFMTCN 93
           A+A+L+GR+F++++RQ+ +T+GRNSS G VD+NMG SSFISRRH++I FE P  F + C 
Sbjct: 62  ALARLEGRDFDFVMRQRTVTVGRNSSHGSVDINMGHSSFISRRHLQITFEGPCGFSLRCL 121

Query: 94  GKNGVFVDG 102
           GKNGVFVDG
Sbjct: 122 GKNGVFVDG 130


>gi|324502070|gb|ADY40912.1| Forkhead box protein K1 [Ascaris suum]
          Length = 1221

 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 140/327 (42%), Gaps = 73/327 (22%)

Query: 18  LKSTSPSPSKIQWKSGTA---IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFI 74
           L+     P +++W        +A L+G    + V ++ + IGR S+  + D+ +  +++I
Sbjct: 66  LEELEKRPQEVRWIGDAKKRPLAILRGPSGTFAVTKRVVVIGRESTHSNTDLIVQENNYI 125

Query: 75  SRRHIEIFFE-HPNFF-MTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWR 132
           SR H+ + +   PN + +  NGKNGV ++               K+ R  EEP    F  
Sbjct: 126 SRCHMILSYTGQPNRWNIKVNGKNGVLIND--------------KMYRRAEEPQTIPFC- 170

Query: 133 IDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPT 192
                                             C  RFPST++++ F+ +      +P 
Sbjct: 171 ----------------------------------CIFRFPSTSLKVLFRGM-----ESPV 191

Query: 193 GQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPT---- 248
            +  S   +    NP T+   P            + +  PF    G++  +   P     
Sbjct: 192 SEEDSQYAI----NPNTTKT-PETAFTRVAAVDVDAADVPF---HGSVPQSVVVPAEVEA 243

Query: 249 SPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHD 308
           SP+ +      S D + ++    A T   +  +      + KPPYSYAQLIVQA+ S+ D
Sbjct: 244 SPQQVS--PTCSTDPNNSSTSTLATTPQRDDSTEEYRNPEEKPPYSYAQLIVQAIMSSPD 301

Query: 309 KQLTLSGIYSFITKNYPYYRTADKGWQ 335
            Q+TLSGIY+FIT  YP+YR  DKGWQ
Sbjct: 302 HQITLSGIYAFITNRYPWYRATDKGWQ 328



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 41/48 (85%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLNRYF+KV R+ +EPGKGSFWR++P S  K +E A+++R+
Sbjct: 329 NSIRHNLSLNRYFVKVARAHDEPGKGSFWRMEPSSAQKNMEMAYKKRK 376


>gi|432847613|ref|XP_004066084.1| PREDICTED: forkhead box protein K1-like [Oryzias latipes]
          Length = 104

 Score = 94.0 bits (232), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 44/79 (55%), Positives = 61/79 (77%), Gaps = 1/79 (1%)

Query: 25  PSKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFF- 83
           P+++ +    A+A+L+GR+FE+++RQ+ +TIGRNSS G VD+NMG SSFISRRH+ I + 
Sbjct: 11  PARLSFTPPRALARLEGRDFEFVMRQRTVTIGRNSSHGSVDINMGHSSFISRRHLLISYD 70

Query: 84  EHPNFFMTCNGKNGVFVDG 102
           E   F + C GKNGVFVDG
Sbjct: 71  EASGFSLRCLGKNGVFVDG 89


>gi|340368735|ref|XP_003382906.1| PREDICTED: forkhead box protein K2-like [Amphimedon queenslandica]
          Length = 441

 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 75/153 (49%), Gaps = 49/153 (32%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNG 94
           A A+L+ REFEY++ ++RI IGR+S  G VDVNMG + FISR+H+EI  +   F++ C G
Sbjct: 6   AYARLEWREFEYLMTKRRIAIGRDSKIGHVDVNMGTTRFISRKHLEISLDGSRFYLLCRG 65

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           KNG+FV+                                            F+RR  + +
Sbjct: 66  KNGIFVN------------------------------------------DVFQRREAKRL 83

Query: 155 PCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNES 187
                   L S C +RFPST I+L F SL+ E+
Sbjct: 84  -------MLPSPCIIRFPSTTIKLVFSSLLEEN 109



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 2/57 (3%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEP--GKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCF 157
           NSIRHNLSLN+YF+K PR +E    GKG +W + P  E KL  QA+ +R+++G+P F
Sbjct: 181 NSIRHNLSLNQYFMKAPREREGLGFGKGGYWCMHPDYEDKLTSQAYVKRKKKGIPVF 237



 Score = 44.7 bits (104), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 21/28 (75%)

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D++ TLS IY FI+  YPYYR  DKGW+
Sbjct: 153 DRKQTLSNIYQFISDKYPYYRLEDKGWK 180


>gi|198466241|ref|XP_001353941.2| GA11206 [Drosophila pseudoobscura pseudoobscura]
 gi|198150510|gb|EAL29677.2| GA11206 [Drosophila pseudoobscura pseudoobscura]
          Length = 692

 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/127 (45%), Positives = 75/127 (59%), Gaps = 24/127 (18%)

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPR-GLHNRRNVSADLHMAAH----Y 269
           PL+I+IP     +   SP+ SPTG      +CP SPR G H  +  + + +   +    +
Sbjct: 380 PLKISIPK----KEQKSPYLSPTG------NCPASPRQGFHQNQPNNYNNYSNNNTQDLF 429

Query: 270 AAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYR- 328
               T   NH        + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+YPYYR 
Sbjct: 430 QTPSTASYNH--------NEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHYPYYRK 481

Query: 329 TADKGWQ 335
             +KGWQ
Sbjct: 482 ETNKGWQ 488



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 52/132 (39%), Gaps = 51/132 (38%)

Query: 55  IGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLN 112
           IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD           
Sbjct: 165 IGRNSSTSLVHFNVAENNLVSRKHFQVLYDLEVRAFFVQCLSKNGIFVDD---------- 214

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                            F +RR         P  L  RC  RFP
Sbjct: 215 ---------------------------------FLQRRNVD------PMRLPPRCYFRFP 235

Query: 173 STNIRLQFQSLV 184
           ST IR++F+S V
Sbjct: 236 STEIRIEFESYV 247



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLNRYFIKV RSQ+EPGK S   +D   E
Sbjct: 489 NSIRHNLSLNRYFIKVARSQDEPGKVSPSHMDNSRE 524


>gi|256075258|ref|XP_002573937.1| forkhead protein/ forkhead protein domain [Schistosoma mansoni]
          Length = 787

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 43/49 (87%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ 151
           NSIRHNLSLNRYFI+VPRSQ EPGKG+FW++DP  E  LI QAFR+RRQ
Sbjct: 476 NSIRHNLSLNRYFIRVPRSQSEPGKGAFWQLDPYCETCLISQAFRKRRQ 524



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 40/46 (86%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYAQLI+QA+ASA +++LTL+ IY+ I+K +PYY+  +KGWQ
Sbjct: 430 KPPYSYAQLIIQAIASAPNQRLTLADIYAHISKTFPYYKPHEKGWQ 475



 Score = 44.7 bits (104), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%)

Query: 47  MVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDG 102
           +V  K + I    S   VDV +  S  +SR+H+EI  ++ + ++ C  KNG+F+DG
Sbjct: 24  VVSDKSVVIVGRKSHIPVDVCLDDSECVSRKHLEIHRKNKDIYLRCLSKNGIFIDG 79


>gi|353233248|emb|CCD80603.1| putative forkhead protein/ forkhead protein domain [Schistosoma
           mansoni]
          Length = 787

 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 43/49 (87%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ 151
           NSIRHNLSLNRYFI+VPRSQ EPGKG+FW++DP  E  LI QAFR+RRQ
Sbjct: 476 NSIRHNLSLNRYFIRVPRSQSEPGKGAFWQLDPYCETCLISQAFRKRRQ 524



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 40/46 (86%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYAQLI+QA+ASA +++LTL+ IY+ I+K +PYY+  +KGWQ
Sbjct: 430 KPPYSYAQLIIQAIASAPNQRLTLADIYAHISKTFPYYKPHEKGWQ 475



 Score = 44.7 bits (104), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%)

Query: 47  MVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDG 102
           +V  K + I    S   VDV +  S  +SR+H+EI  ++ + ++ C  KNG+F+DG
Sbjct: 24  VVSDKSVVIVGRKSHIPVDVCLDDSECVSRKHLEIHRKNKDIYLRCLSKNGIFIDG 79


>gi|195326714|ref|XP_002030070.1| GM24770 [Drosophila sechellia]
 gi|194119013|gb|EDW41056.1| GM24770 [Drosophila sechellia]
          Length = 694

 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 73/132 (55%), Gaps = 34/132 (25%)

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPR----------GLHNRRNVSADLH 264
           PL+I+IP     +   SP+ SPTG      +CP SPR            +   N + DL 
Sbjct: 384 PLKISIPK----KEQKSPYLSPTG------NCPASPRQGFIQNQPNNYNNYGNNNTQDL- 432

Query: 265 MAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
               +    T   NH        + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+Y
Sbjct: 433 ----FQTPSTASYNH--------NEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHY 480

Query: 325 PYYR-TADKGWQ 335
           PYYR   +KGWQ
Sbjct: 481 PYYRKETNKGWQ 492



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 52/132 (39%), Gaps = 51/132 (38%)

Query: 55  IGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLN 112
           IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD           
Sbjct: 172 IGRNSSTSLVHFNVAENNLVSRKHFQVLYDVELRAFFVQCLSKNGIFVDD---------- 221

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                            F +RR         P  L  RC  RFP
Sbjct: 222 ---------------------------------FLQRRNVD------PLRLPQRCYFRFP 242

Query: 173 STNIRLQFQSLV 184
           ST IR++F+S V
Sbjct: 243 STEIRIEFESYV 254



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLNRYFIKV RSQ+EPGK S   +D   E
Sbjct: 493 NSIRHNLSLNRYFIKVARSQDEPGKVSPSHMDNSRE 528


>gi|339259196|ref|XP_003369784.1| putative fork head domain protein [Trichinella spiralis]
 gi|316966010|gb|EFV50646.1| putative fork head domain protein [Trichinella spiralis]
          Length = 942

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/50 (74%), Positives = 44/50 (88%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLNRYFIK+PRSQ+EPGKG+FW +D  SE KL++ AFR+RR R
Sbjct: 232 NSIRHNLSLNRYFIKIPRSQDEPGKGNFWGLDSLSEAKLVQFAFRQRRSR 281



 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 10/46 (21%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYAQLIVQA+AS  ++Q+TLSGIY+          T DK WQ
Sbjct: 196 KPPYSYAQLIVQAIASTSERQMTLSGIYA----------TCDKSWQ 231


>gi|76157466|gb|AAX28380.2| SJCHGC04333 protein [Schistosoma japonicum]
          Length = 264

 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/54 (70%), Positives = 43/54 (79%)

Query: 98  VFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ 151
           V    NSIRHNLSLNRYFI+VPRS  EPGKG+FW++DP  E  LI QAFR+RRQ
Sbjct: 4   VICCMNSIRHNLSLNRYFIRVPRSHSEPGKGAFWQLDPYCETCLISQAFRKRRQ 57


>gi|194748116|ref|XP_001956495.1| GF24569 [Drosophila ananassae]
 gi|190623777|gb|EDV39301.1| GF24569 [Drosophila ananassae]
          Length = 685

 Score = 85.1 bits (209), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/123 (45%), Positives = 76/123 (61%), Gaps = 16/123 (13%)

Query: 215 PLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHT 274
           PL+I+IP     +   SP+ SPTG      +CP SPR    +  +    +   +Y+  +T
Sbjct: 376 PLKISIPK----KEQKSPYLSPTG------NCPASPR----QGFIQNQPNNYNNYSNNNT 421

Query: 275 NVVNHMSLSISQD-DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYR-TADK 332
             +     + S + + KPPYSYAQLIVQA+++A DKQLTLSGIYSFI K+YPYYR   +K
Sbjct: 422 QELFQTPSTASYNHNEKPPYSYAQLIVQAISAAPDKQLTLSGIYSFIVKHYPYYRKETNK 481

Query: 333 GWQ 335
           GWQ
Sbjct: 482 GWQ 484



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 56/140 (40%), Gaps = 54/140 (38%)

Query: 55  IGRNSSRGDVDVNMGLSSFISRRHIEIFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLN 112
           IGRNSS   V  N+  ++ +SR+H ++ +  E   FF+ C  KNG+FVD           
Sbjct: 168 IGRNSSTSLVHFNVAENNLVSRKHFQVIYNTELHAFFVQCLSKNGIFVDD---------- 217

Query: 113 RYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFP 172
                                            F +RR         P  L  RC  RFP
Sbjct: 218 ---------------------------------FLQRRNVD------PLRLPQRCYFRFP 238

Query: 173 STNIRLQFQSLVNESDPAPT 192
           ST IR++F+S V    PAP+
Sbjct: 239 STEIRIEFESYV---PPAPS 255



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/32 (78%), Positives = 27/32 (84%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLNRYFIKV RSQ+EPGK S   +D
Sbjct: 485 NSIRHNLSLNRYFIKVARSQDEPGKVSPSHMD 516


>gi|50310539|ref|XP_455289.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644425|emb|CAG97997.1| KLLA0F04631p [Kluyveromyces lactis]
          Length = 779

 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 148/331 (44%), Gaps = 49/331 (14%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGD--VDVNMGLSSFISRRHIEIFFEHPNFF--M 90
           A AK+ G+++ Y ++   I IGRN+S GD  VD+++G +  +SR+H  I F   +    +
Sbjct: 91  AYAKIAGKDWTYYLKDIVINIGRNTSPGDASVDIDLGPAKVVSRQHATIKFNSNSALWEL 150

Query: 91  TCNGKNGVFVD-------GNSIRHNLSLNRYFIKVPRSQEE---PGKGSFWRIDPGSEHK 140
              G+NG  V+        NS+ H LS +   + +  +Q     P +G +  IDP +   
Sbjct: 151 HVTGRNGAKVNFHRINSGPNSVPHPLS-SGSILDIGGTQMMFILPDQGLY--IDPNAVAH 207

Query: 141 LIEQAFRRRRQRGVPCFRAPFGLSSRCTLR--FPSTNIRLQFQSLVNESDPAPTGQSVSS 198
           L  +            F A + +++   LR  F S    +    L   S P+  GQ   S
Sbjct: 208 LTPK-----------LFMAYYNVTTNPLLRNLFQSNPDLIHSLEL---SSPSRNGQLGVS 253

Query: 199 SGVGVMGNPATSSL------LPPLR-INIPDHPHTEISSSPFPSPTGTISAANSCPTSPR 251
           S   ++   + S L       P +R   + D P + + S      TG +  +N   ++  
Sbjct: 254 SQTQMLPQSSQSHLHSHGNGQPSVRAFKMYDAPDSAMRSQLLSESTGQMYGSNGA-SNGH 312

Query: 252 GLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDS-------KPPYSYAQLIVQAVA 304
           G+ +  N S+D+     Y        N  S  +S D S       KPP+SYA +I QA+ 
Sbjct: 313 GM-SHSNGSSDMSNGQLYGTIANTGFNIASTDVSTDLSRDENRNIKPPHSYATMITQAIL 371

Query: 305 SAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S  + +L+LS IY  I  +Y YYR    GWQ
Sbjct: 372 STEEGELSLSDIYKHIANHYSYYRYTKAGWQ 402



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 29/42 (69%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQ 144
           NSIRHNLSLN+ F KVPR   EPGKG  WRI   ++   +E+
Sbjct: 403 NSIRHNLSLNKAFEKVPRKPGEPGKGMKWRISEETQRDFLEK 444


>gi|348551332|ref|XP_003461484.1| PREDICTED: forkhead box protein J1-like [Cavia porcellus]
          Length = 422

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV---PCFRA 159
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR   V   P F  
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 160 PFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRI 218
                 R T       +  + Q L+ E + A TG++    G G +G     SL  P R+
Sbjct: 227 QAAQEPRATTWAEPLTVNTEAQQLLKEFEEA-TGEAGWGVGEGRLGRKRKQSL--PKRV 282



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|312072283|ref|XP_003138995.1| hypothetical protein LOAG_03410 [Loa loa]
          Length = 300

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/48 (72%), Positives = 43/48 (89%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYAQLIVQA+ S+ D+Q+TLSGIY++IT  YP+YR+ADKGWQ
Sbjct: 148 DGKPPYSYAQLIVQAILSSPDQQMTLSGIYNYITSRYPWYRSADKGWQ 195



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 42/50 (84%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLNRYF+KV RSQEEPGKGSFWR++  +  + +E A+++R+ +
Sbjct: 196 NSIRHNLSLNRYFVKVARSQEEPGKGSFWRMESSAALRNVELAYKKRKPK 245


>gi|218671252|gb|AAI69199.2| forkhead box K1 [synthetic construct]
          Length = 362

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/51 (74%), Positives = 41/51 (80%), Gaps = 1/51 (1%)

Query: 124 EPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG-LSSRCTLRFPS 173
           EPGKGSFWRIDP SE KL+EQAFR+RRQRGV CFR PFG LSSR     P+
Sbjct: 1   EPGKGSFWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFGPLSSRSAPASPT 51


>gi|358332014|dbj|GAA50745.1| forkhead box protein K2 [Clonorchis sinensis]
          Length = 565

 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/62 (59%), Positives = 46/62 (74%)

Query: 274 TNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKG 333
           T V+    L     ++KPPYSYAQLI QA+AS  D+Q+TLSGIY +I++NYPYY T DKG
Sbjct: 366 TAVLRLTDLERGDRNNKPPYSYAQLIAQAIASQPDRQITLSGIYDYISQNYPYYHTQDKG 425

Query: 334 WQ 335
           WQ
Sbjct: 426 WQ 427



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/51 (68%), Positives = 42/51 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           NS+RHNLSLNR+FIK+PR QE+ GKG FWRIDP  E KL+  AF++RR RG
Sbjct: 428 NSVRHNLSLNRHFIKIPRPQEDHGKGCFWRIDPMFESKLLSMAFQKRRSRG 478



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 60/132 (45%), Gaps = 49/132 (37%)

Query: 50  QKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNL 109
           ++RI IGR++S   VDV++G SSF+SR+H+E+ +E     + CNGKNG+FVD        
Sbjct: 79  KERIIIGRSTSAAPVDVDVGQSSFVSRQHLELLWETNILKLRCNGKNGIFVD-------- 130

Query: 110 SLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTL 169
              R F                   PG  H                    P  L  RC L
Sbjct: 131 ---RSF------------------RPGDSH--------------------PRTLPFRCVL 149

Query: 170 RFPSTNIRLQFQ 181
           RFPST+I +Q +
Sbjct: 150 RFPSTSICIQVE 161


>gi|226478986|emb|CAX72988.1| Forkhead box protein K2 [Schistosoma japonicum]
          Length = 558

 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 52/76 (68%), Gaps = 2/76 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NS+RHNLSLN  FIKVPRSQE+ GKG FWRIDP  E KL+  AFR+RR R   C  + F 
Sbjct: 330 NSVRHNLSLNCQFIKVPRSQEDHGKGCFWRIDPEHEAKLLNIAFRKRRLRA--CDTSSFL 387

Query: 163 LSSRCTLRFPSTNIRL 178
            ++R  L   S+N +L
Sbjct: 388 PNNRFPLTSLSSNRKL 403



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 32/47 (68%), Positives = 40/47 (85%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSYAQLI QA++S  D++LTLSGIY FI++NY YY+  DKGWQ
Sbjct: 283 TKPPYSYAQLIAQAISSQPDRKLTLSGIYEFISRNYSYYQLTDKGWQ 329



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 53/83 (63%), Gaps = 4/83 (4%)

Query: 37  AKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKN 96
           A+L   +  Y + + +ITIGR+S+   VD+++G SS++SR+H+EI ++     + C GKN
Sbjct: 6   ARLTMGKSTYEMIKHQITIGRSSTVTPVDIDIGSSSYVSRQHLEIIWKTDCLKLKCKGKN 65

Query: 97  GVFVDGNSIRHNLSLNRYFIKVP 119
           G+F++ +   H    + +F+ +P
Sbjct: 66  GIFINQDFRPH----SSHFLSIP 84


>gi|378728188|gb|EHY54647.1| forkhead box protein J1 [Exophiala dermatitidis NIH/UT8656]
          Length = 795

 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 142/340 (41%), Gaps = 88/340 (25%)

Query: 24  SPSKIQWKSGTAIAKLQGREFEYMVRQKRITIGR-----------NSSRGD------VDV 66
           SP K+     +A AK+ GR++ Y V+++ + IGR           +S   D      V +
Sbjct: 104 SPQKV-----SAYAKIAGRDWTYFVKEQSVNIGRPPDDRQNVNGASSPVADLKDVLPVHI 158

Query: 67  NMGLSSFISRRHIEIFFE------HPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPR 120
           ++G S  +SR H  I+++         + +  NG+NGV V+                   
Sbjct: 159 DLGPSKIVSRHHASIYYDADFPVDEGGWHLRVNGRNGVRVN------------------- 199

Query: 121 SQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQF 180
                             + L+++  RR+ + G     A     ++     P   +++  
Sbjct: 200 ------------------NVLVKKGLRRQLRSGDILEIA----GTQMMFVTPGDKVQID- 236

Query: 181 QSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSP--FPSPTG 238
           Q  ++ +     G+ ++         P+T +  PP +    + P+T +   P   P+P  
Sbjct: 237 QYFIDRAKALAAGEEMA---------PSTMAPEPPKQQ---ESPYTNVQHFPSLAPAPAD 284

Query: 239 TISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQD---DSKPPYSY 295
                   P S  G   R    + + M+  Y+     + +   +  SQD   D KPP+SY
Sbjct: 285 LKRETTPPPQSDGGKQQRGVFDSKMPMSPMYSRGMM-MESTQEIDYSQDSAKDLKPPFSY 343

Query: 296 AQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           A +I QA+ S+ +++LTLS IYSFI   Y +YR ++ GWQ
Sbjct: 344 ATMIAQAIFSSEEEKLTLSNIYSFIADKYAFYRHSNSGWQ 383



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 31/46 (67%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRR 148
           NSIRHNLSLN+ F KVPR  +EPGKG  W+I P       ++ FRR
Sbjct: 384 NSIRHNLSLNKAFQKVPRRTDEPGKGMKWQIAPEFRQDYWKKLFRR 429


>gi|1922310|emb|CAA67729.1| fork head homologue 4 [Homo sapiens]
 gi|1922315|emb|CAA67730.1| unnamed protein product [Homo sapiens]
          Length = 419

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 4/97 (4%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV---PCFRA 159
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR   V   P F  
Sbjct: 166 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 225

Query: 160 PFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSV 196
                     R     +  + Q L+ E +  PTG++V
Sbjct: 226 QAAQEPSAVPRAGPLTVNTEAQQLLREFE-EPTGEAV 261



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 120 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 165


>gi|19115184|ref|NP_594272.1| fork head transcription factor Fhl1 [Schizosaccharomyces pombe
           972h-]
 gi|26401560|sp|O14270.2|FHL1_SCHPO RecName: Full=Fork head transcription factor 1
 gi|7211056|emb|CAB77015.1| fork head transcription factor Fhl1 [Schizosaccharomyces pombe]
          Length = 743

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 148/331 (44%), Gaps = 47/331 (14%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRG-DVDVNMGLSSFISRRHIEIFFEHPN--FFMT 91
           A AKL+  +F + V+  ++T+GR +S   D DV++G +  ISR+H +IF+  PN  F ++
Sbjct: 21  AYAKLEFEKFSFFVQTLQVTMGRKASNSSDCDVHLGDTKAISRQHAKIFYSFPNQRFEIS 80

Query: 92  CNGKNGVFVDGNSIRHNLSLN-RYFIKVPRSQEEPGKGSFWRIDP-GSEHK--LIEQAFR 147
             GKNG FVDG  +    S+  R   +V     + G+ SF  + P GSE    L E    
Sbjct: 81  VMGKNGAFVDGEFVERGKSVPLRSGTRV-----QIGQISFSFLLPEGSEEDGHLKETGIT 135

Query: 148 -RRRQRGVPCFRAPFGLSSRCTLRFPSTNIR--LQFQSLVNESDPAPTGQSVS----SSG 200
               Q+G   +   FG     +    ++N    L F  + +ESD  P G S +    S+ 
Sbjct: 136 PLSLQQGKIAYSDEFGGKPTGSFHTVTSNQEKDLLFSHIKHESD-LPLGLSPADTNISNA 194

Query: 201 VGVMGNPATSSL-------LPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL 253
             ++ +P  ++         PP  + +       +S  P+  PT          +  R +
Sbjct: 195 TSIIEHPDAANAHTLASLNQPPKHLTVSPSSIQRLSPQPYVRPT----------SDERPI 244

Query: 254 HNRRNVSA------DLHMAAHYAAAHTNVVNHMSLSISQDD----SKPPYSYAQLIVQAV 303
               +VSA      D  +    + + ++ V H  L+ S D      KP  SYA LI + +
Sbjct: 245 ETDSSVSAPKVANHDEELKQGKSTSPSDTVLHPDLNGSPDTGDATQKPNLSYANLIARTL 304

Query: 304 ASAHDKQLTLSGIYSFITKNYPYYRTADKGW 334
            +  +K++TL  I  +I  N+ YYR     W
Sbjct: 305 IANPNKKMTLGDICEWIANNWSYYRHQPPAW 335



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 35/49 (71%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ 151
           NSIRHNLSLN+ FI++PR Q EPGKGSFW +DP    +     FRR ++
Sbjct: 337 NSIRHNLSLNKAFIRIPRRQNEPGKGSFWMLDPSYIDQFEGNFFRRTKK 385


>gi|212527752|ref|XP_002144033.1| forkhead transcription factor Fkh1/2, putative [Talaromyces
           marneffei ATCC 18224]
 gi|210073431|gb|EEA27518.1| forkhead transcription factor Fkh1/2, putative [Talaromyces
           marneffei ATCC 18224]
          Length = 730

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 129/328 (39%), Gaps = 70/328 (21%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRG------------------DVDVNMGLSSFISR 76
           A AK+ GR++ Y V+   I IGR   R                   +V V++G S F+SR
Sbjct: 108 AYAKIAGRDWTYYVKTAHINIGRPPDREQKLDEQSSPVSIAARALPEVHVDLGPSKFVSR 167

Query: 77  RHIEIFF-----EHPNFFMTCNGKNGVFVDGNSIRHNLS--LN-RYFIKVPRSQEEPGKG 128
            H EIFF     E   + +  NG+NGV V+   ++      LN    I++  +Q      
Sbjct: 168 LHAEIFFYGDDEESSAWHIRVNGRNGVRVNNVMLKRGTDAILNCGDIIEIANTQ------ 221

Query: 129 SFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESD 188
               + PG +  +I  +F  R QR       P+  S       P+T    Q   +++   
Sbjct: 222 -MMFVTPG-DKAVIHPSFVERAQRIAAGEEIPWDGSQHA---HPATYDAQQPGRVID--- 273

Query: 189 PAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSP-FPSPTGTISAANSCP 247
                 +  +        P   SL P      P     +++  P  P   G  +A    P
Sbjct: 274 ------NGGAYAAANGAQPGKPSLAP-----APQFLKRQVTPPPRSPDTVGGQTATKQSP 322

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
              RG+        D                      S  D KPPYSYA +I QA+ S+ 
Sbjct: 323 LYNRGMMMESTEEIDYSQD------------------SAKDLKPPYSYATMIAQAIFSSE 364

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +++LTL+ IY +I + Y +YR +  GWQ
Sbjct: 365 EEKLTLNSIYQWIMEKYAFYRHSQSGWQ 392



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 31/54 (57%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPC 156
           NSIRHNLSLN+ F KVPR  +EPGKG  W I P    +  ++  R+      P 
Sbjct: 393 NSIRHNLSLNKAFQKVPRRTDEPGKGMKWMIAPEHRQEYWKKQLRKGNNSSAPS 446


>gi|194216622|ref|XP_001915666.1| PREDICTED: forkhead box protein J1 [Equus caballus]
          Length = 421

 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 67/114 (58%), Gaps = 18/114 (15%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV---PCFRA 159
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR   V   P F  
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAF-- 224

Query: 160 PFGLSSRCTLRFPST-------NIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
                +R  ++ PS+        +  + Q L+ E + A TG++   +G G +G+
Sbjct: 225 -----ARQAVQEPSSTPWPGPLTVNTEAQQLLREFEEA-TGEAGWGTGEGRLGH 272



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|351696497|gb|EHA99415.1| Forkhead box protein J1 [Heterocephalus glaber]
          Length = 422

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 4/113 (3%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV---PCFRA 159
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR   V   P F  
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPQVHIHPAFAR 226

Query: 160 PFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSL 212
                 R T       +  + Q L+ E +   TG++   +G   +G     SL
Sbjct: 227 QAAQEPRATALARPLAVNTEAQQLLREFEEV-TGEAGWGTGESRLGRKRKQSL 278



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|256078822|ref|XP_002575693.1| forkhead protein/ forkhead protein domain [Schistosoma mansoni]
          Length = 433

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/47 (70%), Positives = 41/47 (87%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSYAQLI QA++S  D++LTLSGIY FI++NY YY+ ADKGWQ
Sbjct: 264 TKPPYSYAQLIAQAISSQPDRKLTLSGIYDFISRNYSYYQLADKGWQ 310



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/51 (70%), Positives = 40/51 (78%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           NSIRHNLSLN  F+KVPRSQE+ GKG FWRIDP  E KL+  AFR+RR R 
Sbjct: 311 NSIRHNLSLNCQFVKVPRSQEDHGKGCFWRIDPEHEAKLLNIAFRKRRIRA 361


>gi|256078824|ref|XP_002575694.1| forkhead protein/ forkhead protein domain [Schistosoma mansoni]
          Length = 368

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/47 (70%), Positives = 41/47 (87%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSYAQLI QA++S  D++LTLSGIY FI++NY YY+ ADKGWQ
Sbjct: 199 TKPPYSYAQLIAQAISSQPDRKLTLSGIYDFISRNYSYYQLADKGWQ 245



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/51 (70%), Positives = 40/51 (78%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           NSIRHNLSLN  F+KVPRSQE+ GKG FWRIDP  E KL+  AFR+RR R 
Sbjct: 246 NSIRHNLSLNCQFVKVPRSQEDHGKGCFWRIDPEHEAKLLNIAFRKRRIRA 296


>gi|444727815|gb|ELW68293.1| Forkhead box protein J1 [Tupaia chinensis]
          Length = 453

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 18/114 (15%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV---PCFRA 159
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR+  V   P F  
Sbjct: 177 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRRPQVHIHPAF-- 234

Query: 160 PFGLSSRCTLRFPST-------NIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
                +R   + PS         +  + Q L+ E + A TG++   +G G +G+
Sbjct: 235 -----ARQAAQEPSAVPWAGPLTVNSEAQQLLREFEEA-TGEASWGAGEGRLGH 282



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 131 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 176


>gi|358339644|dbj|GAA47665.1| forkhead box protein K1 [Clonorchis sinensis]
          Length = 660

 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 45/61 (73%), Gaps = 5/61 (8%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLNRYFI+VPRS  E GKG+FW++DP    +LI QAF++RRQ     F   FG
Sbjct: 347 NSIRHNLSLNRYFIRVPRSGTERGKGAFWQLDPVCGPRLINQAFKQRRQ-----FEGTFG 401

Query: 163 L 163
           +
Sbjct: 402 I 402



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 40/49 (81%)

Query: 287 DDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +  KPPYSYAQLI+QA+AS+  ++LTLSGIY++I   +PYY+  +KGWQ
Sbjct: 298 EQRKPPYSYAQLIIQAIASSPKQRLTLSGIYTYIGTKFPYYKLDEKGWQ 346


>gi|73965003|ref|XP_533124.2| PREDICTED: forkhead box protein J1 [Canis lupus familiaris]
          Length = 422

 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 5/108 (4%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV---PCF-R 158
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR   V   P F R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFAR 226

Query: 159 APFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
                  R         +    Q L+ E + A TG++   +G G +G+
Sbjct: 227 QASPQEPRAAPWAGPLTVNPDAQQLLREFEEA-TGEAAWGAGEGRLGH 273



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|431908751|gb|ELK12343.1| Forkhead box protein J1 [Pteropus alecto]
          Length = 418

 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 67/128 (52%), Gaps = 7/128 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV---PCFRA 159
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR   V   P F  
Sbjct: 164 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPQVHIHPAFAR 223

Query: 160 PFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRI- 218
                           +  + Q L+ E + A TG++    G G +G+     L  P R+ 
Sbjct: 224 QAAQEPSAAPWAGPLTVNTEAQQLLREFEEA-TGEAGWGVGEGRLGHKRKQPL--PKRVA 280

Query: 219 NIPDHPHT 226
            +P  P T
Sbjct: 281 KVPRPPST 288



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 118 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 163


>gi|344291136|ref|XP_003417292.1| PREDICTED: forkhead box protein J1 [Loxodonta africana]
          Length = 418

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 6/108 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV---PCF-R 158
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR   V   P F R
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFVR 226

Query: 159 APFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
                 S  +   P T +  + Q L+ E + A TG+   +SG G  G+
Sbjct: 227 QASQEPSTASWARPLT-VNTEAQQLLREFEEA-TGEVGWASGEGRPGH 272



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|355754397|gb|EHH58362.1| hypothetical protein EGM_08193 [Macaca fascicularis]
          Length = 453

 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 199 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 246


>gi|1568641|gb|AAB09039.1| forkhead transcription factor HFH-4 [Homo sapiens]
          Length = 421

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|410981742|ref|XP_003997225.1| PREDICTED: forkhead box protein J1 [Felis catus]
          Length = 417

 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|300797101|ref|NP_001179005.1| forkhead box protein J1 [Bos taurus]
 gi|296476016|tpg|DAA18131.1| TPA: forkhead box protein J1-like [Bos taurus]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|402578130|gb|EJW72085.1| hypothetical protein WUBG_17008, partial [Wuchereria bancrofti]
          Length = 107

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 41/48 (85%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY QLIVQA+ S+ D+Q+TLSGIY++IT +YP+YR  DKGW+
Sbjct: 6   DEKPPYSYTQLIVQAILSSPDRQITLSGIYNYITSHYPWYRKTDKGWR 53



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 1/44 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLNRYF+KV RSQEEPGKGSFWRI+  S  + IE A+
Sbjct: 54  NSIRHNLSLNRYFVKVARSQEEPGKGSFWRIE-SSALRNIELAY 96


>gi|426346856|ref|XP_004041086.1| PREDICTED: forkhead box protein J1 [Gorilla gorilla gorilla]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|402901152|ref|XP_003913520.1| PREDICTED: forkhead box protein J1 [Papio anubis]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|297701836|ref|XP_002827905.1| PREDICTED: forkhead box protein J1 [Pongo abelii]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|403280514|ref|XP_003931762.1| PREDICTED: forkhead box protein J1 [Saimiri boliviensis
           boliviensis]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|109118372|ref|XP_001104114.1| PREDICTED: forkhead box protein J1 [Macaca mulatta]
 gi|355568942|gb|EHH25223.1| hypothetical protein EGK_09005 [Macaca mulatta]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|296203249|ref|XP_002806918.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein J1 [Callithrix
           jacchus]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|291413429|ref|XP_002722969.1| PREDICTED: forkhead box J1 [Oryctolagus cuniculus]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|335297321|ref|XP_003358007.1| PREDICTED: forkhead box protein J1 [Sus scrofa]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|50301236|ref|NP_001445.2| forkhead box protein J1 [Homo sapiens]
 gi|12644465|sp|Q92949.3|FOXJ1_HUMAN RecName: Full=Forkhead box protein J1; AltName:
           Full=Forkhead-related protein FKHL13; AltName:
           Full=Hepatocyte nuclear factor 3 forkhead homolog 4;
           Short=HFH-4
 gi|7161177|emb|CAB76562.1| forkhead transcription factor HFH-4 [Homo sapiens]
 gi|28277045|gb|AAH46460.1| Forkhead box J1 [Homo sapiens]
 gi|119609781|gb|EAW89375.1| forkhead box J1, isoform CRA_a [Homo sapiens]
 gi|119609782|gb|EAW89376.1| forkhead box J1, isoform CRA_a [Homo sapiens]
 gi|208966294|dbj|BAG73161.1| forkhead box J1 [synthetic construct]
 gi|208968413|dbj|BAG74045.1| forkhead box J1 [synthetic construct]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|126308410|ref|XP_001369080.1| PREDICTED: forkhead box protein J1 [Monodelphis domestica]
          Length = 418

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 163 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 210



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 117 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 162


>gi|301769031|ref|XP_002919910.1| PREDICTED: forkhead box protein J1-like [Ailuropoda melanoleuca]
 gi|281350052|gb|EFB25636.1| hypothetical protein PANDA_008596 [Ailuropoda melanoleuca]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|397484260|ref|XP_003813295.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein J1 [Pan
           paniscus]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|114670611|ref|XP_511694.2| PREDICTED: forkhead box protein J1 [Pan troglodytes]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|149637705|ref|XP_001508237.1| PREDICTED: forkhead box protein J1 [Ornithorhynchus anatinus]
          Length = 410

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/107 (42%), Positives = 60/107 (56%), Gaps = 9/107 (8%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV---PCFRA 159
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR   V   P F  
Sbjct: 157 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHVHPAFAR 216

Query: 160 PFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
           P        L      +  + Q L+ E + A TG++    G G  G+
Sbjct: 217 PAQPGPGGAL-----AVNPEAQQLLREFEEA-TGEAGWGPGEGRPGH 257



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 111 KPPYSYATLICMAMQASKASKITLSAIYKWITDNFCYFRHADPTWQ 156


>gi|354489441|ref|XP_003506871.1| PREDICTED: forkhead box protein J1 [Cricetulus griseus]
 gi|344248578|gb|EGW04682.1| Forkhead box protein J1 [Cricetulus griseus]
          Length = 421

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|16758686|ref|NP_446284.1| forkhead box protein J1 [Rattus norvegicus]
 gi|2494506|sp|Q63247.1|FOXJ1_RAT RecName: Full=Forkhead box protein J1; AltName: Full=Hepatocyte
           nuclear factor 3 forkhead homolog 4; Short=HFH-4
 gi|577499|gb|AAC37671.1| bp 399..701 forkhead domain; putative [Rattus norvegicus]
 gi|1096882|prf||2112356A hepatocyte nuclear factor
          Length = 421

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|149054848|gb|EDM06665.1| forkhead box J1 [Rattus norvegicus]
          Length = 421

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|226693376|ref|NP_032266.3| forkhead box protein J1 [Mus musculus]
 gi|341940707|sp|Q61660.2|FOXJ1_MOUSE RecName: Full=Forkhead box protein J1; AltName:
           Full=Forkhead-related protein FKHL13; AltName:
           Full=Hepatocyte nuclear factor 3 forkhead homolog 4;
           Short=HFH-4
 gi|74183821|dbj|BAE24495.1| unnamed protein product [Mus musculus]
 gi|148702625|gb|EDL34572.1| forkhead box J1 [Mus musculus]
          Length = 421

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|432113353|gb|ELK35765.1| Forkhead box protein J1 [Myotis davidii]
          Length = 208

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 36  NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 83


>gi|52139045|gb|AAH82543.1| Forkhead box J1 [Mus musculus]
          Length = 421

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|550488|gb|AAA21689.1| forkhead Box j1 [Mus musculus]
          Length = 421

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 214



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|440895209|gb|ELR47470.1| Forkhead box protein J1, partial [Bos grunniens mutus]
          Length = 320

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 66  NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 113



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 20  KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 65


>gi|241250761|ref|XP_002403371.1| forkhead domain-containing protein, putative [Ixodes scapularis]
 gi|215496483|gb|EEC06123.1| forkhead domain-containing protein, putative [Ixodes scapularis]
          Length = 448

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 4/60 (6%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ FIKVPR+++EPGKG FWR+DP     L++  F++RR    P  R P G
Sbjct: 166 NSIRHNLSLNKCFIKVPRTKDEPGKGGFWRLDPVYADSLVDGVFKKRR----PAQRHPGG 221



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 7/78 (8%)

Query: 264 HMAAHYAAAHTNVVNHMSLSI------SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIY 317
           H  A + A HT       + +      SQ  SKPPYSYA LI  A+  A+  ++TLS IY
Sbjct: 89  HRTAMHGAGHTPTALSRCVPVEEPDYRSQGSSKPPYSYATLICMAM-KANKNKMTLSAIY 147

Query: 318 SFITKNYPYYRTADKGWQ 335
            +I  N+ YYR AD  WQ
Sbjct: 148 KWIRDNFLYYRNADPSWQ 165


>gi|426239247|ref|XP_004013537.1| PREDICTED: forkhead box protein J1 [Ovis aries]
          Length = 406

 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 196 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 243



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 150 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 195


>gi|160333299|ref|NP_001070174.2| forkhead box protein J1 [Danio rerio]
 gi|158906080|gb|ABW82682.1| forkhead box transcription factor protein J1 [Danio rerio]
          Length = 458

 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 40/48 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+ +A+++RR
Sbjct: 188 NSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAERLLNEAYKKRR 235



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 142 KPPYSYATLICMAMQASKKTKITLSCIYKWITDNFCYFRHADPTWQ 187


>gi|193090146|gb|ACF15248.1| forkhead box J1 [Danio rerio]
          Length = 458

 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 3/74 (4%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+  A+++RR   +P  +    
Sbjct: 188 NSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAERLLNGAYKKRR---LPPVQINPA 244

Query: 163 LSSRCTLRFPSTNI 176
           L  R T+   +T I
Sbjct: 245 LQHRLTMNAQATGI 258



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 142 KPPYSYATLICMAMQASKKTKITLSCIYKWITDNFCYFRHADPTWQ 187


>gi|395533007|ref|XP_003768555.1| PREDICTED: uncharacterized protein LOC100915773 [Sarcophilus
           harrisii]
          Length = 574

 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 451 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 498



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 405 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 450


>gi|111073417|emb|CAJ20800.1| forkhead box protein J1 [Oryctolagus cuniculus]
          Length = 274

 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++RR
Sbjct: 24  NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRR 71


>gi|327264991|ref|XP_003217292.1| PREDICTED: forkhead box protein J1-B-like [Anolis carolinensis]
          Length = 447

 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+  AF++RR
Sbjct: 175 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAFKKRR 222



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 129 KPPYSYATLICMAMEASKKIKITLSDIYKWITDNFCYFRHADPTWQ 174


>gi|363740742|ref|XP_001233327.2| PREDICTED: forkhead box protein J1 [Gallus gallus]
          Length = 474

 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+  AF++RR
Sbjct: 208 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAFKKRR 255



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 162 KPPYSYATLICMAMEASKKTKITLSAIYKWITDNFCYFRHADPTWQ 207


>gi|326930732|ref|XP_003211496.1| PREDICTED: forkhead box protein J1-like [Meleagris gallopavo]
          Length = 430

 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+  AF++RR
Sbjct: 164 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAFKKRR 211



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 118 KPPYSYATLICMAMEASKKTKITLSAIYKWITDNFCYFRHADPTWQ 163


>gi|395825892|ref|XP_003786154.1| PREDICTED: forkhead box protein J1 [Otolemur garnettii]
          Length = 421

 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 63/114 (55%), Gaps = 18/114 (15%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV---PCFRA 159
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+  AF++R    V   P F  
Sbjct: 167 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRGLPPVHIHPAF-- 224

Query: 160 PFGLSSRCTLRFPST-------NIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
                +R   + PS         +  + Q L+ E + A TG++    G G +G+
Sbjct: 225 -----ARQAAQEPSAAPWARPLTVNTEAQQLLREFEEA-TGEAGWGMGEGRLGH 272



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 121 KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 166


>gi|348510163|ref|XP_003442615.1| PREDICTED: forkhead box protein J1-like [Oreochromis niloticus]
          Length = 459

 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 25/111 (22%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+  A+++RR   +P  +    
Sbjct: 186 NSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAERLLSGAYKKRR---MPPVQINPA 242

Query: 163 LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLL 213
           L +R         +R+  Q       P P GQ      +G+  NP +  LL
Sbjct: 243 LQNR---------LRVNVQ-------PQPRGQ------IGLCVNPESQRLL 271



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ YYR AD  WQ
Sbjct: 140 KPPYSYATLICMAMQASKKSKITLSCIYKWITDNFCYYRHADPTWQ 185


>gi|156395079|ref|XP_001636939.1| predicted protein [Nematostella vectensis]
 gi|156224047|gb|EDO44876.1| predicted protein [Nematostella vectensis]
          Length = 94

 Score = 73.9 bits (180), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/48 (62%), Positives = 37/48 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F+KVPR ++EPGKG FWRIDP      ++  F+RRR
Sbjct: 47  NSIRHNLSLNKCFVKVPRKKDEPGKGGFWRIDPAYADMFVDGVFKRRR 94



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+      ++TLS IY +I +N+ +YR AD  WQ
Sbjct: 1   KPPYSYATLICMAMRDTKRVKITLSAIYKWIKENFMFYRVADPTWQ 46


>gi|444301785|gb|AGD98929.1| FoxJ1 [Nematostella vectensis]
          Length = 411

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 37/48 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F+KVPR ++EPGKG FWRIDP      ++  F+RRR
Sbjct: 148 NSIRHNLSLNKCFVKVPRKKDEPGKGGFWRIDPAYADMFVDGVFKRRR 195



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 30/46 (65%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+      ++TLS IY +I +N+ +YR AD  WQ
Sbjct: 102 KPPYSYATLICMAMRDTKRVKITLSAIYKWIKENFMFYRVADPTWQ 147


>gi|170574023|ref|XP_001892640.1| myocyte nuclear factor-beta [Brugia malayi]
 gi|158601683|gb|EDP38527.1| myocyte nuclear factor-beta [Brugia malayi]
          Length = 177

 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/54 (61%), Positives = 42/54 (77%), Gaps = 1/54 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPC 156
           NSIRHNLSLNRYFIKV RSQE PGKGSFW+I+  S  + IE  +++R+ + + C
Sbjct: 87  NSIRHNLSLNRYFIKVARSQEGPGKGSFWKIE-SSALRNIELVYKKRKSKSLKC 139



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/38 (60%), Positives = 30/38 (78%)

Query: 298 LIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           LIVQA+ S+ D+Q TLS IY++IT  YP+YR  DKGW+
Sbjct: 49  LIVQAILSSPDRQTTLSDIYNYITSRYPWYRKTDKGWR 86


>gi|429852213|gb|ELA27359.1| forkhead transcription factor fkh1 [Colletotrichum gloeosporioides
           Nara gc5]
          Length = 676

 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 13/130 (10%)

Query: 217 RINIPDHPHTEISSS-------PFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHY 269
           R ++P+ P + + S+       PF  P     A    P +P  +  +   S   H + HY
Sbjct: 248 RTDLPEEPSSALGSTIRSSRGQPFRQPIAPAPADYKRPGTPPSVRGKPTPSQ--HKSPHY 305

Query: 270 AAAHTNVVNHMSLSISQDDSK---PPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPY 326
           +++ T +VN   + +S DD+K   P YSYAQ+I QA+ +  + +L L+GIY+FI  NY Y
Sbjct: 306 SSSGTLLVNSNDIDLSHDDNKHIKPQYSYAQMITQAIINTPEGKLNLNGIYNFIMNNYAY 365

Query: 327 YRTAD-KGWQ 335
           YR     GWQ
Sbjct: 366 YRHQQAAGWQ 375



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 31/45 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           NSIRHNLSLN+ F KV RS +EPGKG  W+I   +  ++   A++
Sbjct: 376 NSIRHNLSLNKSFDKVARSTDEPGKGMKWQIVADAREEMTRSAYK 420



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 8/80 (10%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVD------VNMGLSSFISRRHIEIFF--EHP 86
           A AK+  +++ + + +  + IGR++   D D      +++G S  +SR+H  I+F  +  
Sbjct: 114 AYAKIAAQDWTFYITKLNVNIGRSAEGVDEDDEDFIHIDLGPSKMVSRQHARIYFSSKEE 173

Query: 87  NFFMTCNGKNGVFVDGNSIR 106
            +F+   G+NGV VDG S++
Sbjct: 174 VWFLEVKGRNGVRVDGVSLK 193


>gi|296411082|ref|XP_002835264.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295628039|emb|CAZ79385.1| unnamed protein product [Tuber melanosporum]
          Length = 624

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 130/335 (38%), Gaps = 102/335 (30%)

Query: 34  TAIAKLQGREFEYMVRQKRITIGR-----------------NSSRGDVDVNMGLSSFISR 76
           TA AK+ G  + Y V++  I IGR                   +   V +++G S  +SR
Sbjct: 84  TAYAKVAGASWTYYVKELTIRIGRPPDARPGTAGSPTPPPQQKAEDIVHIDLGPSKLVSR 143

Query: 77  RHIEIFFEHP---NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEP-GKGSFWR 132
            H  I ++     N+ +   G+NG+ V+                     EEP  K +   
Sbjct: 144 SHAIITYDMAGDRNWQLRVLGRNGLKVN---------------------EEPYKKDAVIV 182

Query: 133 IDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPT 192
           +  GS   +IE         GV      F L  R     PS   R +  + + +     T
Sbjct: 183 LQSGS---IIEIG-------GVQMM---FVLPDRPASIHPSFLQRARVLAPIEDDLQLQT 229

Query: 193 GQSVSSSGVGVMGNPATS---------SLLPPLRINIPDHPHTEISSSPFPSPTGTISAA 243
            QS  SS       P++           LLPP  I       T+  S P P+        
Sbjct: 230 TQSNDSSNYDTATMPSSQGPRPSSSQQQLLPPAVI-------TDNPSQPEPA------RR 276

Query: 244 NSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQD---DSKPPYSYAQLIV 300
              PT PRG+                      V+   ++  S D   D KPPYSYA +I 
Sbjct: 277 KDEPTFPRGV----------------------VLTAENIDYSDDSLKDMKPPYSYAMMIA 314

Query: 301 QAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           QA+ S+  +QLTLS IYSFIT+ Y +YR ++ GWQ
Sbjct: 315 QAILSSEGEQLTLSAIYSFITEKYAFYRHSNTGWQ 349



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 13/75 (17%)

Query: 59  SSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKV 118
           SS G+      + SFI+ ++   F+ H N               NSIRHNLSLN+ F K+
Sbjct: 319 SSEGEQLTLSAIYSFITEKYA--FYRHSNTGWQ-----------NSIRHNLSLNKAFRKI 365

Query: 119 PRSQEEPGKGSFWRI 133
           PR  +EPGKG  W +
Sbjct: 366 PRRTDEPGKGMKWEL 380


>gi|321465421|gb|EFX76422.1| hypothetical protein DAPPUDRAFT_8603 [Daphnia pulex]
          Length = 95

 Score = 72.4 bits (176), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/48 (62%), Positives = 40/48 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIK+PRS++EPGKG FWR+DP  E KL + + +++R
Sbjct: 48  NSIRHNLSLNKCFIKIPRSKDEPGKGGFWRLDPAFESKLDDNSLKKKR 95



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S   K +TLS IY +I +N+ YYR  D  WQ
Sbjct: 1   DVKPPYSYASLICMAMKSNKHK-MTLSSIYKWIKENFLYYRNVDPSWQ 47


>gi|410925928|ref|XP_003976431.1| PREDICTED: forkhead box protein J1-like [Takifugu rubripes]
          Length = 470

 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 38/48 (79%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+   +++RR
Sbjct: 184 NSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAERLLSGTYKKRR 231



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TL+ IY +IT N+ YYR AD  WQ
Sbjct: 138 KPPYSYATLICMAMQASKKTKITLACIYKWITDNFCYYRYADPTWQ 183


>gi|147905183|ref|NP_001083644.1| forkhead box protein J1-B [Xenopus laevis]
 gi|82129534|sp|Q708W1.1|FXJ1B_XENLA RecName: Full=Forkhead box protein J1-B; Short=FoxJ1-B;
           Short=FoxJ1b; Short=xFoxJ1'
 gi|38566761|emb|CAE76651.1| forkhead box protein [Xenopus laevis]
 gi|213623392|gb|AAI69682.1| Forkhead box protein [Xenopus laevis]
 gi|213625038|gb|AAI69680.1| Forkhead box protein [Xenopus laevis]
          Length = 439

 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 38/48 (79%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+  A ++RR
Sbjct: 170 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAMKKRR 217



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 124 KPPYSYATLICMAMQASKKTKITLSAIYKWITDNFCYFRHADPTWQ 169


>gi|115313226|gb|AAI24229.1| Forkhead box J1a [Danio rerio]
 gi|197247009|gb|AAI64538.1| Foxj1a protein [Danio rerio]
          Length = 458

 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 39/48 (81%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           +SIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+  A+++RR
Sbjct: 188 SSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAERLLNGAYKKRR 235



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 142 KPPYSYATLICMAMQASKKTKITLSCIYKWITDNFCYFRHADPTWQ 187


>gi|115502201|sp|Q5M7N6.2|FOXJ1_XENTR RecName: Full=Forkhead box protein J1; Short=FoxJ1
          Length = 438

 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 38/48 (79%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+  A ++RR
Sbjct: 169 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAMKKRR 216



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 123 KPPYSYATLICMAMQASKKTKITLSAIYKWITDNFCYFRHADPTWQ 168


>gi|89267832|emb|CAJ82756.1| forkhead box J1 [Xenopus (Silurana) tropicalis]
          Length = 427

 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 38/48 (79%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+  A ++RR
Sbjct: 158 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAMKKRR 205



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 112 KPPYSYATLICMAMQASKKTKITLSAIYKWITDNFCYFRHADPTWQ 157


>gi|58332586|ref|NP_001011367.1| forkhead box protein J1 [Xenopus (Silurana) tropicalis]
 gi|56789645|gb|AAH88533.1| forkhead box J1 [Xenopus (Silurana) tropicalis]
          Length = 427

 Score = 71.6 bits (174), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 38/48 (79%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+  A ++RR
Sbjct: 158 NSIRHNLSLNKCFIKVPREKDEPGKGGFWKIDPQYADRLMNGAMKKRR 205



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 112 KPPYSYATLICMAMQASKKTKITLSAIYKWITDNFCYFRHADPTWQ 157


>gi|148233368|ref|NP_001083646.1| forkhead box protein J1-A [Xenopus laevis]
 gi|82129535|sp|Q708W2.1|FXJ1A_XENLA RecName: Full=Forkhead box protein J1-A; Short=FoxJ1-A;
           Short=FoxJ1a; Short=xFoxJ1; AltName: Full=Forkhead
           protein 5; Short=xFKH5
 gi|38566759|emb|CAE76650.1| forkhead box protein [Xenopus laevis]
          Length = 439

 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 38/48 (79%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F+KVPR ++EPGKG FW+IDP    +LI  A ++RR
Sbjct: 170 NSIRHNLSLNKCFMKVPREKDEPGKGGFWKIDPQYADRLINGAMKKRR 217



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY++IT N+ Y+R AD  WQ
Sbjct: 124 KPPYSYATLICMAMQASKKTKITLSAIYNWITDNFCYFRHADPTWQ 169


>gi|47217992|emb|CAG02275.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 395

 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 38/48 (79%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP    +L+   +++RR
Sbjct: 139 NSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAERLLSGTYKKRR 186



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TL+ IY +IT N+ YYR AD  WQ
Sbjct: 93  KPPYSYATLICMAMQASKKSKITLACIYKWITDNFCYYRYADPTWQ 138


>gi|50416260|gb|AAH77846.1| FoxJ1 protein [Xenopus laevis]
          Length = 428

 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 38/48 (79%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F+KVPR ++EPGKG FW+IDP    +LI  A ++RR
Sbjct: 159 NSIRHNLSLNKCFMKVPREKDEPGKGGFWKIDPQYADRLINGAMKKRR 206



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY++IT N+ Y+R AD  WQ
Sbjct: 113 KPPYSYATLICMAMQASKKTKITLSAIYNWITDNFCYFRHADPTWQ 158


>gi|47215279|emb|CAF98088.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 631

 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 109/262 (41%), Gaps = 52/262 (19%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEP-GKGSFWRIDPGSEHKLIEQAFRR----------RRQ 151
           NS+RHNLSLN  F+KV R    P GK ++W ++P SE+   +  FRR          + Q
Sbjct: 113 NSVRHNLSLNDCFLKVLRDPSRPWGKDNYWMLNPQSEYTFADGVFRRRRKRIAKRSPKEQ 172

Query: 152 RGVPC------------------FRAPFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTG 193
            G                     F +PF + S       ST  + +  S V+        
Sbjct: 173 EGTDILGDKSRLPAPEKRVGGSKFSSPFAIDS-----ILSTPFKRKEDSHVD-------- 219

Query: 194 QSVSSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGL 253
               +  +G   +P     L P  +  P +   E+++              S P S   L
Sbjct: 220 --ADAQALGFYWSPGAH--LVPYAVGYPSYVRAEMTTETPQQQLDPPPPMRSSPASGV-L 274

Query: 254 HNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTL 313
           H      A L   A   ++ + +    + S  +   KPPYSY  LIV A+ S+  K+LTL
Sbjct: 275 H-----PAMLSPQAATESSSSAIKGKKTSSGLRRPEKPPYSYIALIVMAIQSSPTKRLTL 329

Query: 314 SGIYSFITKNYPYYRTADKGWQ 335
           S IY F+   +P++R + +GW+
Sbjct: 330 SEIYQFLQARFPFFRGSYQGWK 351



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/41 (60%), Positives = 29/41 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIE 143
           NS+RHNLSLN  FIK+P+    PGKG +W IDPGSE    E
Sbjct: 352 NSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPGSEFMFEE 392



 Score = 44.7 bits (104), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 29/46 (63%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +   +LTL+ I  ++ K +P++R +  GW+
Sbjct: 67  KPPYSYIALIAMAIRESGSGRLTLAEINDYLMKKFPFFRGSYTGWR 112


>gi|410519368|gb|AFV73346.1| forkhead box protein J1 [Placozoa sp. H4]
          Length = 518

 Score = 71.2 bits (173), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 36/48 (75%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F KVPR ++EPGKG FW+IDP      ++  FR+RR
Sbjct: 158 NSIRHNLSLNKCFAKVPRKKDEPGKGGFWKIDPAHADMFVDGIFRKRR 205



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+  +   ++TLS IY++I +N+ YYR AD  WQ
Sbjct: 112 KPPYSYATLICMAMKESKKSKITLSAIYNWIKENFMYYRIADPSWQ 157


>gi|325090430|gb|EGC43740.1| forkhead box protein [Ajellomyces capsulatus H88]
          Length = 707

 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 138/334 (41%), Gaps = 70/334 (20%)

Query: 31  KSGTAIAKLQGREFEYMVRQKRITIGRNSSRG------------------DVDVNMGLSS 72
           +S  A AK+ GR++ Y ++   I IGR   R                   +V +++G + 
Sbjct: 108 ESVKAYAKIAGRDWTYYMKGLHINIGRPPDRDQRIYAQSSPLVAAAQAMPEVHIDLGPNK 167

Query: 73  FISRRHIEIFF---EHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGS 129
           F+SR H EI F   E   + +  NG+       N IR    LN   +K         +G+
Sbjct: 168 FVSRLHAEILFNSQEPTGWHIRVNGR-------NGIR----LNTQIVK---------RGT 207

Query: 130 FWRIDPGSEHKLIEQAFRRRRQRGVPCFRA---PFGLSSRCTLRFPSTNIRLQFQSLVNE 186
             RI  G    +IE A  +      P  RA   PF    +C       +     +S    
Sbjct: 208 ISRITCGD---VIEIAGTQM-MFVTPDVRAVIHPF-FVDKCQRLAAGDDAASWDESQHAH 262

Query: 187 SDPAPTGQSVSSSGVGV--MGNPAT---SSLLPPLRINIPDHPHTEISSSPFPSPTGTIS 241
            D   +  S +++        NP T   +   P  +     H   +I+  P P    T  
Sbjct: 263 PDQVRSKASRTAAHFDQDHRHNPGTGNGTEPTPATKAASSYHKDRQITPPPRPRSPNT-- 320

Query: 242 AANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQ 301
            A++ P  P  L+NR      + M +     ++N         S  D KPPYSYA +I Q
Sbjct: 321 -ADAPPPKPSPLYNR-----GMMMESTEDIDYSN--------DSAKDLKPPYSYATMIAQ 366

Query: 302 AVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           A+ S  +++LTLS IY++IT+ Y +YR  + GWQ
Sbjct: 367 AIFSTEEEKLTLSKIYAYITEKYAFYRHTNSGWQ 400



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F KVPR  +EPGKG  W+I P    +   +  RR   +      +P G
Sbjct: 401 NSIRHNLSLNKAFQKVPRRTDEPGKGMKWQIAPEFRQEYWNKQTRRSNNQQSSAPSSPVG 460

Query: 163 LSSRCTLRFPS--TNIRLQFQSLVNESDPAP 191
             ++   R  +  T     F+S    S+P+P
Sbjct: 461 KENKGGSRSANGQTGYDKSFESSFPTSNPSP 491


>gi|240278649|gb|EER42155.1| forkhead box protein C2 [Ajellomyces capsulatus H143]
          Length = 735

 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 138/334 (41%), Gaps = 70/334 (20%)

Query: 31  KSGTAIAKLQGREFEYMVRQKRITIGRNSSRG------------------DVDVNMGLSS 72
           +S  A AK+ GR++ Y ++   I IGR   R                   +V +++G + 
Sbjct: 108 ESVKAYAKIAGRDWTYYMKGLHINIGRPPDRDQRIYAQSSPLVAAAQAMPEVHIDLGPNK 167

Query: 73  FISRRHIEIFF---EHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGS 129
           F+SR H EI F   E   + +  NG+       N IR    LN   +K         +G+
Sbjct: 168 FVSRLHAEILFNSQEPTGWHIRVNGR-------NGIR----LNTQIVK---------RGT 207

Query: 130 FWRIDPGSEHKLIEQAFRRRRQRGVPCFRA---PFGLSSRCTLRFPSTNIRLQFQSLVNE 186
             RI  G    +IE A  +      P  RA   PF    +C       +     +S    
Sbjct: 208 ISRITCGD---VIEIAGTQM-MFVTPDVRAVIHPF-FVDKCQRLAAGDDAASWDESQHAH 262

Query: 187 SDPAPTGQSVSSSGVGV--MGNPAT---SSLLPPLRINIPDHPHTEISSSPFPSPTGTIS 241
            D   +  S +++        NP T   +   P  +     H   +I+  P P    T  
Sbjct: 263 PDQVRSKASRTAAHFDQDHRHNPGTGNGTEPTPATKAASSYHKDRQITPPPRPRSPNT-- 320

Query: 242 AANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQ 301
            A++ P  P  L+NR      + M +     ++N         S  D KPPYSYA +I Q
Sbjct: 321 -ADAPPPKPSPLYNR-----GMMMESTEDIDYSN--------DSAKDLKPPYSYATMIAQ 366

Query: 302 AVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           A+ S  +++LTLS IY++IT+ Y +YR  + GWQ
Sbjct: 367 AIFSTEEEKLTLSKIYAYITEKYAFYRHTNSGWQ 400



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F KVPR  +EPGKG  W+I P    +   +  RR   +      +P G
Sbjct: 401 NSIRHNLSLNKAFQKVPRRTDEPGKGMKWQIAPEFRQEYWNKQTRRSNNQQSSAPSSPVG 460

Query: 163 LSSRCTLRFPS--TNIRLQFQSLVNESDPAP 191
             ++   R  +  T     F+S    S+P+P
Sbjct: 461 KENKGGSRSANGQTGYDKSFESSFPTSNPSP 491


>gi|391334573|ref|XP_003741677.1| PREDICTED: forkhead box protein J1-like [Metaseiulus occidentalis]
          Length = 447

 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 40/48 (83%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIK+PR ++EPGKG FW++DP   + +++ +F++R+
Sbjct: 122 NSIRHNLSLNKCFIKIPRQKDEPGKGGFWKLDPNYVNHMVDGSFKKRK 169



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 2/56 (3%)

Query: 281 SLSISQDDS-KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++  + DDS KPP+SYA LI  A+ +  +K +TLS IY +I  N+ YYR AD GWQ
Sbjct: 67  TIDFANDDSVKPPFSYANLICMAMQNNSNK-MTLSAIYKWIRDNFKYYRNADPGWQ 121


>gi|313214931|emb|CBY41144.1| unnamed protein product [Oikopleura dioica]
 gi|313234919|emb|CBY24864.1| unnamed protein product [Oikopleura dioica]
          Length = 383

 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 37/181 (20%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R     +  + 
Sbjct: 136 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRDANGKLDYD 195

Query: 163 LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPD 222
                  R P  N+            P P G   ++ G  V G  +T             
Sbjct: 196 -------RPPDYNL---------PHVPHPPGNIATTPGGAVEGAGST------------- 226

Query: 223 HPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSL 282
              TE ++S  PS     S+A+  P  P+  H   + SA++  +AH   AHT+V+   +L
Sbjct: 227 ---TEQAASHQPS----TSSADVVPQQPQ-QHAIPSSSAEVPSSAHLTPAHTSVIQEQTL 278

Query: 283 S 283
           +
Sbjct: 279 A 279



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +A DK+LTL+ IY ++ +N+P+Y+ +  GWQ
Sbjct: 90  RPPYSYSALIAMAIQNAPDKKLTLAQIYLYVAENFPFYKKSRAGWQ 135


>gi|443692515|gb|ELT94108.1| hypothetical protein CAPTEDRAFT_182306 [Capitella teleta]
          Length = 326

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/49 (61%), Positives = 38/49 (77%)

Query: 287 DDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++ KPPYSY  LI+ A+ SA +K+LTLSGIY FI KN+PYYR   +GWQ
Sbjct: 80  NEEKPPYSYNALIMMAIRSAAEKRLTLSGIYEFIMKNFPYYRENKQGWQ 128



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP ++   I     + R+R
Sbjct: 129 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSADDVYIGGTTGKLRRR 178


>gi|56693369|ref|NP_001008648.1| forkhead box J1b [Danio rerio]
 gi|56269306|gb|AAH86726.1| Forkhead box J1b [Danio rerio]
 gi|182889918|gb|AAI65812.1| Foxj1b protein [Danio rerio]
          Length = 442

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 36/48 (75%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F+KVPR ++EPGKG FW+IDP      +   F+RRR
Sbjct: 185 NSIRHNLSLNKCFMKVPRQKDEPGKGGFWQIDPQYADMFVNGVFKRRR 232



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 4/104 (3%)

Query: 235 SPTGTISAANSCPTSPRGLHNRRNVSAD---LHMAAHYAAAHTNVVNHMSLSISQDDSKP 291
           SP    +AA   P +P       +  A+   L  A  Y    TN    +    ++   KP
Sbjct: 82  SPPAGDTAATGMPQTPGNPTTSCSSLANPYALQQAGQYITGQTNPAEEIDYKTNRH-VKP 140

Query: 292 PYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           PYSYA LI  A+ +++  ++TLS IYS+IT+N+ YYR A+  WQ
Sbjct: 141 PYSYATLICMAMQASNKTKITLSAIYSWITENFCYYRYAEPSWQ 184


>gi|340387183|ref|XP_003392087.1| PREDICTED: forkhead box protein K1-like, partial [Amphimedon
           queenslandica]
          Length = 218

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 39/50 (78%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           Q  +KPP+SYAQLIVQA+ ++ D++ TLS IY FI+  YPYYR  DKGW+
Sbjct: 105 QKYTKPPFSYAQLIVQALLASSDRKQTLSNIYQFISDKYPYYRLEDKGWK 154



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 2/57 (3%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEP--GKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCF 157
           NSIRHNLSLN+YF+K PR +E    GKG +W + P  E KL  QA+ +R+++G+P F
Sbjct: 155 NSIRHNLSLNQYFMKAPREREGLGFGKGGYWCMHPDYEDKLTSQAYVKRKKKGIPVF 211


>gi|449283091|gb|EMC89794.1| Forkhead box protein J1, partial [Columba livia]
          Length = 434

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 11/95 (11%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV---PCFRA 159
           NSIRHNLSLN+ FIKVPR + EPGKG FW++DP    +L   A ++RR   V   P F  
Sbjct: 169 NSIRHNLSLNKCFIKVPREKGEPGKGGFWKLDPEYADRLKNGASKKRRMPSVQIHPAFTK 228

Query: 160 PFGLSSRCTLRFPST--------NIRLQFQSLVNE 186
                S C    P++        N+  + Q L+ E
Sbjct: 229 KAQQGSWCVTSPPASACTSNNILNVSTESQQLLKE 263



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 9/118 (7%)

Query: 221 PDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHM 280
           PD PH       F +P   ++A  +C   P      + +S+     AH+A A   +  H+
Sbjct: 57  PD-PHDCQRIPSFAAPCSPLAADPACMGMPHT--PCKPISSSTSRTAHHAVA---MPPHL 110

Query: 281 SLSISQDDS---KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +  I    +   KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 111 AEDIDYKTNPHIKPPYSYATLICMAMEASKKPKITLSAIYKWITDNFCYFRHADPTWQ 168


>gi|291229466|ref|XP_002734694.1| PREDICTED: fork-head box I transcription factor [Saccoglossus
           kowalevskii]
          Length = 298

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPRS+++PGKG++W +DP  E       FRR+R+R
Sbjct: 145 NSIRHNLSLNDCFKKVPRSEDDPGKGNYWMLDPNCEKMFDNGNFRRKRKR 194



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 36/46 (78%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +K++TLSGIY +++ N+P+Y+ +  GWQ
Sbjct: 99  RPPYSYSALIAMAIQSAGEKKITLSGIYKYVSDNFPFYKKSKAGWQ 144


>gi|195999868|ref|XP_002109802.1| hypothetical protein TRIADDRAFT_17444 [Trichoplax adhaerens]
 gi|190587926|gb|EDV27968.1| hypothetical protein TRIADDRAFT_17444, partial [Trichoplax
           adhaerens]
          Length = 94

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/48 (60%), Positives = 36/48 (75%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F KVPR ++EPGKG FW+IDP      ++  FR+RR
Sbjct: 47  NSIRHNLSLNKCFTKVPRKKDEPGKGGFWKIDPAHADMFVDGIFRKRR 94



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+  +   ++TLS IY++I +N+ YYR AD  WQ
Sbjct: 1   KPPYSYATLICMAMKESKKSKITLSAIYNWIRENFMYYRIADPSWQ 46


>gi|158294804|ref|XP_315819.4| AGAP005804-PA [Anopheles gambiae str. PEST]
 gi|157015735|gb|EAA11372.4| AGAP005804-PA [Anopheles gambiae str. PEST]
          Length = 422

 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 128/313 (40%), Gaps = 86/313 (27%)

Query: 36  IAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGK 95
           +A+L   +   ++   R+ +GR      VD  +   + ISR+H  + + +  F +    K
Sbjct: 60  LARLICGDQNVLIIGHRVVVGRARQNNAVDFQVARDTLISRKHFTLHYSNGVFAVEVLSK 119

Query: 96  NGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVP 155
           NGV++D           + F+                  P S+                 
Sbjct: 120 NGVYLD-----------KLFL------------------PQSD----------------- 133

Query: 156 CFRAPFGLSSRCTLRFPSTNIRLQFQSLVNES---------DPAPTGQSVS-SSGVGVMG 205
               P+ +   C  +FPST+  + F++LV  +         +  P+ ++++ S  +    
Sbjct: 134 ---LPYTVPKSCVFKFPSTSTTVFFENLVECAANDGVVMVMNGPPSAEAMNLSCKIQHAE 190

Query: 206 NPATSSLLPP--LRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADL 263
           + + + ++P     ++IPD P  E + S  P    TIS  +     P    N  +     
Sbjct: 191 DASVNDVVPQDNANMDIPDVP-LECTGSGSP----TISEEHQLEALPDASENESS----- 240

Query: 264 HMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKN 323
             A++       +V            KPPYSYAQLI+QA+ ++  +Q TL  IY+++  N
Sbjct: 241 --ASYVPTESIEIV------------KPPYSYAQLIIQAIIASPQQQCTLPEIYAYLRAN 286

Query: 324 YPYYRTADK-GWQ 335
           YP++R   + GWQ
Sbjct: 287 YPFFRQRRQNGWQ 299



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 35/49 (71%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ 151
           NSIRHNLSLNRYFIKVPR  +   KG +WRIDP     L ++ F++R Q
Sbjct: 300 NSIRHNLSLNRYFIKVPRMTDVAAKGCYWRIDPTCYASLKKKRFQKRLQ 348


>gi|426246743|ref|XP_004017149.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein I1 [Ovis
           aries]
          Length = 433

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 2/113 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR--GVPCFRAP 160
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R   V     P
Sbjct: 228 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDVSSSTGP 287

Query: 161 FGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLL 213
                        +    + Q +++ + P PTG     S     G P  SS L
Sbjct: 288 MASEKTEAGLLGGSPETAEAQDILDGAAPGPTGSPEKRSTPPPPGTPCLSSFL 340



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 182 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 227


>gi|118601046|ref|NP_001073013.1| forkhead transcription factor J1 [Strongylocentrotus purpuratus]
 gi|82706192|gb|ABB89480.1| forkhead transcription factor J1 [Strongylocentrotus purpuratus]
          Length = 468

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 36/48 (75%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F KVPR ++EPGKG FWRIDP    +L    F++RR
Sbjct: 195 NSIRHNLSLNKCFQKVPRKKDEPGKGGFWRIDPAHADELENGVFKKRR 242



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY+ LI  A+  +   ++TLS IY +IT+N+ YY+ AD  WQ
Sbjct: 149 KPPYSYSTLIWMAMKESKKHKITLSSIYKWITENFKYYQVADPSWQ 194


>gi|238054025|ref|NP_001153933.1| forkhead box J1 [Oryzias latipes]
 gi|226441738|gb|ACO57471.1| forkhead box J1 [Oryzias latipes]
          Length = 429

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 37/48 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ FIKVPR ++EPGKG FW+IDP     L+  + ++RR
Sbjct: 152 NSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAEHLLSGSHKKRR 199


>gi|332846627|ref|XP_523450.3| PREDICTED: forkhead box protein C2 [Pan troglodytes]
          Length = 405

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 2/57 (3%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR--GVPCF 157
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F RRR+R  G+P F
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFHGLPGF 174



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117


>gi|224075106|ref|XP_002189803.1| PREDICTED: forkhead box protein J1 [Taeniopygia guttata]
          Length = 432

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 39/52 (75%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           NSIRHNLSLN+ FIKVPR ++EPGKG FW++DP   ++L    +++RR   V
Sbjct: 167 NSIRHNLSLNKSFIKVPREKDEPGKGGFWKLDPYYANRLKYGTYKKRRMSPV 218



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 14/109 (12%)

Query: 233 FPSPTGTISAANSC------PTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQ 286
           F SP   ++A  +C      P +P       +   DL +  H A       N        
Sbjct: 66  FESPCSPLAADPACKGTRHTPCTPVSSSTSSSTHHDLAVPPHLAGDIDYKTNPRV----- 120

Query: 287 DDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
              KPPYSYA LI  A+  +   +LTL+ I  +I+ ++ Y+R A   W+
Sbjct: 121 ---KPPYSYATLICMAMEGSEQPKLTLAAICKWISDHFCYFRRAHPSWK 166


>gi|443692513|gb|ELT94106.1| hypothetical protein CAPTEDRAFT_139421, partial [Capitella teleta]
          Length = 157

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 40/61 (65%), Gaps = 4/61 (6%)

Query: 279 HMSLSISQDDS----KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGW 334
           H      Q DS    KPPYSY  LI+ A+ SA +K+LTL+GIY FI KN+PYYR   +GW
Sbjct: 43  HEGEKKEQKDSGKGEKPPYSYNALIMMAIRSAPEKRLTLNGIYEFIMKNFPYYRENKQGW 102

Query: 335 Q 335
           Q
Sbjct: 103 Q 103



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 32/40 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI 142
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP ++   I
Sbjct: 104 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSADDVFI 143


>gi|410914914|ref|XP_003970932.1| PREDICTED: forkhead box protein I1-ema-like [Takifugu rubripes]
          Length = 347

 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 5/67 (7%)

Query: 87  NF-FMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQA 145
           NF F +CN K+G     NSIRHNLSLN  F KVPR + +PGKG++W +DP  E       
Sbjct: 145 NFPFYSCN-KSGW---QNSIRHNLSLNDCFQKVPRDENDPGKGNYWTLDPNCEKMFDNGN 200

Query: 146 FRRRRQR 152
           FRR+R+R
Sbjct: 201 FRRKRKR 207



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ S  ++++TLS IY +++ N+P+Y     GWQ
Sbjct: 112 RPPYSYSALIAMAIQSVPEQRMTLSQIYQYVSNNFPFYSCNKSGWQ 157


>gi|194353800|emb|CAK50838.1| crocodile protein [Glomeris marginata]
          Length = 462

 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 15/119 (12%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F RRR+    CF+    
Sbjct: 40  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSLNMFDNGSFLRRRR----CFK---- 91

Query: 163 LSSRCTLRFPSTNI-RLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINI 220
              + TL+    ++ + Q    +N  +  P  + +++S       P  +S  PP   +I
Sbjct: 92  --KKDTLKEKEESLKKQQHHHHINGGNNQPAAEDMATSST----TPCRTSPPPPTSASI 144



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 27/38 (71%)

Query: 298 LIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           LI  A+ SA +K++TL+GIY FI   +PYYR   +GWQ
Sbjct: 2   LIAMAIQSAPEKKITLNGIYQFIMDRFPYYRENKQGWQ 39


>gi|348502407|ref|XP_003438759.1| PREDICTED: forkhead box protein J1-A-like [Oreochromis niloticus]
          Length = 499

 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 35/48 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F KVPR ++EPGKG FW+IDP      +   F+RRR
Sbjct: 198 NSIRHNLSLNKCFKKVPRQKDEPGKGGFWQIDPQYADMFVNGIFKRRR 245



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY++IT+N+ YYR A+  WQ
Sbjct: 152 KPPYSYASLICMAMQASKQPKVTLSTIYNWITENFCYYRHAEPSWQ 197


>gi|432921842|ref|XP_004080249.1| PREDICTED: forkhead box protein J1-A-like [Oryzias latipes]
          Length = 269

 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 37/53 (69%)

Query: 98  VFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           +F   NSIRHNLSLN+ F KVPR ++EPGKG FW+IDP      +   F+RRR
Sbjct: 7   LFPPQNSIRHNLSLNKCFKKVPRQKDEPGKGGFWQIDPQYADMFVNGIFKRRR 59


>gi|410895821|ref|XP_003961398.1| PREDICTED: forkhead box protein J1-like [Takifugu rubripes]
          Length = 467

 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 35/48 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F KVPR ++EPGKG FW+IDP      +   F+RRR
Sbjct: 197 NSIRHNLSLNKCFKKVPRQKDEPGKGGFWQIDPQYADMFVNGIFKRRR 244



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY++IT+N+ YYR A+  WQ
Sbjct: 151 KPPYSYASLICMAMQASKQPKVTLSTIYNWITENFCYYRHAEPSWQ 196


>gi|327265172|ref|XP_003217382.1| PREDICTED: forkhead box protein I1-ema-like [Anolis carolinensis]
          Length = 375

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 37/54 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPC 156
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R++   C
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKKKSDC 222



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|317419182|emb|CBN81219.1| Forkhead box protein J1-A [Dicentrarchus labrax]
          Length = 490

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 35/48 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F KVPR ++EPGKG FW+IDP      +   F+RRR
Sbjct: 197 NSIRHNLSLNKCFKKVPRQKDEPGKGGFWQIDPQYADMFVNGIFKRRR 244



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY++IT+N+ YYR A+  WQ
Sbjct: 151 KPPYSYASLICMAMQASKQPKVTLSTIYNWITENFCYYRHAEPSWQ 196


>gi|302409138|ref|XP_003002403.1| FKH1 [Verticillium albo-atrum VaMs.102]
 gi|261358436|gb|EEY20864.1| FKH1 [Verticillium albo-atrum VaMs.102]
          Length = 379

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 11/146 (7%)

Query: 201 VGVMGNPATSSLLPPLRINIPDHPHTEIS-----SSPFPSPTGTISAANSCPTSPRGLHN 255
           +G+     TS + PP      D P +        S PF  P          P +P     
Sbjct: 234 LGIPKQDVTSPIPPPSAAGPSDEPPSSQPVSSGRSQPFRQPIAPAPPDYKRPGTPPSA-- 291

Query: 256 RRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDS---KPPYSYAQLIVQAVASAHDKQLT 312
           R  V +  H +  Y+++ T +++   + +SQDD+   KP +SYAQ+I QA+ +  D +L 
Sbjct: 292 RSKVLSAQHKSPGYSSSGTLLLSANDVDLSQDDNRHIKPQFSYAQMITQAIINTPDGKLN 351

Query: 313 LSGIYSFITKNYPYYR-TADKGWQVN 337
           L+GIY+FIT NY YYR     GWQ++
Sbjct: 352 LNGIYNFITANYAYYRHQPAAGWQIH 377



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 16/92 (17%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNS--------------SRGDVDVNMGLSSFISRRHIE 80
           A AK+  +++ + V +  + IGR +              S   V +++G S  +SRRH  
Sbjct: 106 AYAKIAAQDWTFYVTKLNVNIGRAADPAASGTQQQEDPESDDFVHIDLGPSKLVSRRHAR 165

Query: 81  IFF--EHPNFFMTCNGKNGVFVDGNSIRHNLS 110
           IFF  E  ++F+   G+NGV  + + ++   S
Sbjct: 166 IFFNSEDESWFLEVIGRNGVKANNSPLKQGTS 197


>gi|440889679|gb|ELR44677.1| Forkhead box protein I1, partial [Bos grunniens mutus]
          Length = 273

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R      +   
Sbjct: 64  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDVSSSTGS 123

Query: 163 LSSRCTLR--FPSTNIRLQFQSLVNESDPAPTG 193
           ++S  T       +    + Q +++ + P PTG
Sbjct: 124 MASEKTEAGLLAGSPKTAEAQDILDGAAPGPTG 156



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 18  RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 63


>gi|260824405|ref|XP_002607158.1| hypothetical protein BRAFLDRAFT_118651 [Branchiostoma floridae]
 gi|190576669|gb|ACE79142.1| winged helix/forkhead transcription factor FoxJ1 [Branchiostoma
           floridae]
 gi|190576673|gb|ACE79144.1| winged helix/forkhead transcription factor FoxJ1 [Branchiostoma
           floridae]
 gi|229292504|gb|EEN63168.1| hypothetical protein BRAFLDRAFT_118651 [Branchiostoma floridae]
          Length = 440

 Score = 68.2 bits (165), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 35/48 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F KVPRS+ EPGKG FW+IDP     ++    ++RR
Sbjct: 186 NSIRHNLSLNKCFTKVPRSKNEPGKGGFWKIDPQHADMIVNGTLKKRR 233



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 4/110 (3%)

Query: 230 SSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDS 289
           SSP P+  G+     + P +  G  ++     + H A  YA A   +    S+      +
Sbjct: 76  SSPKPAEDGSKRQTQAQPAAVSGNASQHVHVKEEHKATLYAPAGPPIGTPESIDKIDYKT 135

Query: 290 ----KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
               KPPYSYA LI  A+      ++TLS IY +I  N+ YY  A+  WQ
Sbjct: 136 NPYVKPPYSYATLICMAMKETKKSKITLSDIYKWIKTNFKYYEMAEPSWQ 185


>gi|405964919|gb|EKC30358.1| Forkhead box protein J1-A [Crassostrea gigas]
          Length = 292

 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ-RGVPCF 157
           NSIRHNLSLN+ F KVPR ++EPGKG FWRI+P     +    F++RR  R  PC 
Sbjct: 36  NSIRHNLSLNKCFQKVPRRKDEPGKGGFWRINPEYNDMIENGIFKKRRNSRETPCL 91



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 302 AVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           A+      ++TLS IY++IT N+ YYR AD  WQ
Sbjct: 2   AMKETKKSKITLSAIYNWITDNFMYYRLADPSWQ 35


>gi|312069618|ref|XP_003137766.1| hypothetical protein LOAG_02180 [Loa loa]
 gi|307767074|gb|EFO26308.1| hypothetical protein LOAG_02180 [Loa loa]
          Length = 303

 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 39/51 (76%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S ++ KPP+SY  LI+ A+ S+ +K+LTLSGIY +I KNYP+YR   +GWQ
Sbjct: 56  SDENGKPPFSYNALIMMAIRSSKEKRLTLSGIYDYIMKNYPFYRDNKQGWQ 106



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 32/40 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI 142
           NSIRHNLSLN+ F+KVPRS ++PGKG++W +D   E ++ 
Sbjct: 107 NSIRHNLSLNKCFVKVPRSYDDPGKGNYWMLDASCEDEVF 146


>gi|430813644|emb|CCJ29019.1| unnamed protein product, partial [Pneumocystis jirovecii]
          Length = 412

 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 266 AAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYP 325
           +  Y    +++   +SL  S  D KPPYSYA +I QA+ S  + +LTLSGIYS+I+ NY 
Sbjct: 247 STEYENNESSLERDLSLD-SAKDIKPPYSYATMIAQAIMSTEEGKLTLSGIYSWISSNYA 305

Query: 326 YYRTADKGWQ 335
           YYR +  GWQ
Sbjct: 306 YYRFSKSGWQ 315



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 35/52 (67%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           NSIRHNLSLNR F KVPR  +EPGKG  W++ P    +LIE+  ++   R +
Sbjct: 316 NSIRHNLSLNRAFRKVPRRADEPGKGMKWQVSPEYREELIERTKKQGLHRRI 367



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 14/88 (15%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRG------------DVDVNMGLSSFISRRHIEIF 82
           A AKL G  + Y V+   +TIGR S R              VD+++G +  +SR+H  I 
Sbjct: 74  AYAKLAGATWTYYVKALSVTIGRESDRTASENESHAEFNIHVDLDLGPAKIVSRKHAIIE 133

Query: 83  FEHPNFFMTC--NGKNGVFVDGNSIRHN 108
           ++    F  C   G+NG+ +D    R N
Sbjct: 134 YDLQGRFWECIVYGRNGIRIDNKLYRDN 161


>gi|170588651|ref|XP_001899087.1| Forkhead transcription factor family protein 2, isoform b, putative
           [Brugia malayi]
 gi|158593300|gb|EDP31895.1| Forkhead transcription factor family protein 2, isoform b, putative
           [Brugia malayi]
          Length = 300

 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 39/51 (76%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S ++ KPP+SY  LI+ A+ S+ +K+LTLSGIY +I KNYP+YR   +GWQ
Sbjct: 55  SDENGKPPFSYNALIMMAIRSSKEKRLTLSGIYDYIMKNYPFYRDNKQGWQ 105



 Score = 57.4 bits (137), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 32/40 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI 142
           NSIRHNLSLN+ F+KVPR+ ++PGKG++W +D   E ++ 
Sbjct: 106 NSIRHNLSLNKCFVKVPRNYDDPGKGNYWMLDASCEDEVF 145


>gi|387016000|gb|AFJ50119.1| Forkhead box protein I1-ema-like [Crotalus adamanteus]
          Length = 371

 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 41/63 (65%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R++   C  +   
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKKKSDCSASTVT 228

Query: 163 LSS 165
           L+S
Sbjct: 229 LAS 231



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|443686852|gb|ELT89986.1| hypothetical protein CAPTEDRAFT_222987 [Capitella teleta]
          Length = 528

 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 36/48 (75%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F KVPR ++EPGKG FWRI+P  +   +   F++RR
Sbjct: 181 NSIRHNLSLNKCFQKVPRRKDEPGKGGFWRINPEYQDMFVNGVFKKRR 228



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+  +   ++TLSGIY++IT+N+ YYR AD  WQ
Sbjct: 135 KPPYSYATLICMAMKESKKNKVTLSGIYNWITENFMYYRMADPSWQ 180


>gi|402591392|gb|EJW85321.1| hypothetical protein WUBG_03767 [Wuchereria bancrofti]
          Length = 301

 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 39/51 (76%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S ++ KPP+SY  LI+ A+ S+ +K+LTLSGIY +I KNYP+YR   +GWQ
Sbjct: 54  SDENGKPPFSYNALIMMAIRSSKEKRLTLSGIYDYIMKNYPFYRDNKQGWQ 104



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 32/40 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI 142
           NSIRHNLSLN+ F+KVPRS ++PGKG++W +D   E ++ 
Sbjct: 105 NSIRHNLSLNKCFVKVPRSYDDPGKGNYWMLDASCEDEVF 144


>gi|300794065|ref|NP_001179878.1| forkhead box protein I2 [Bos taurus]
 gi|296472554|tpg|DAA14669.1| TPA: forkhead box I2-like [Bos taurus]
          Length = 312

 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ-RGVPCFRAPF 161
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+ RG     AP 
Sbjct: 143 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRGEAGAVAPS 202

Query: 162 GLSSRCTLRFP 172
           G  S+   R P
Sbjct: 203 GPRSQAGARAP 213



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA  ++LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 97  RPPYSYSALIAMAIQSAPRRKLTLSQIYQYVAGNFPFYKRSKAGWQ 142


>gi|410083587|ref|XP_003959371.1| hypothetical protein KAFR_0J01720 [Kazachstania africana CBS 2517]
 gi|372465962|emb|CCF60236.1| hypothetical protein KAFR_0J01720 [Kazachstania africana CBS 2517]
          Length = 461

 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 78/333 (23%), Positives = 139/333 (41%), Gaps = 60/333 (18%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNS-----------------------SRGDVDVNMGLS 71
           A AK+ G+E+ + V+  ++T+GRN+                       + G +D+++G +
Sbjct: 53  AYAKISGKEWTFYVKSLQVTLGRNTDTFNLMNNVLNDQATQPDHLNPIATGLIDIDLGPA 112

Query: 72  SFISRRHIEIFFEHPNFF--MTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGS 129
             +SR+H  I F     F  +   G+NG             +N   +K  ++ E     S
Sbjct: 113 KIVSRKHATITFNRVTGFWQLLVPGRNGA-----------KINFKRVKAGKNAEPVDLKS 161

Query: 130 FWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFGLSSR-CTLRFPSTNIRLQFQSLVNESD 188
              ID G     ++  F    Q  V  +     L  +  T+   S N      +++N S+
Sbjct: 162 GDIIDVGG----VQMMFILPDQEPVVPYEVITTLIPKLVTMYGLSGNNNKLLCAIINNSE 217

Query: 189 PAPTGQSVSSSGVGVMGNPATSSLLPPLRI---NIPDHPHTEISSSPFPSPTGTISAANS 245
                + +      +  N +T     P++    N  + P   I ++   SP+G ++   S
Sbjct: 218 YVKKQKQLGYITFHLQENGSTG----PMKNEDGNNNEGPDESIFNNAIQSPSGPLTQTLS 273

Query: 246 C--PTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDS-KPPYSYAQLIVQA 302
              P +    HN  N+++++          +N ++     IS   S KP  SYA LI QA
Sbjct: 274 VFPPPTATMSHNNSNMASNIM---------SNPISSNKFKISNSKSGKPSASYATLITQA 324

Query: 303 VASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + S+ +  ++LS IY FI   + YY+T + GWQ
Sbjct: 325 ILSSPEGIISLSDIYKFIENTHEYYKTTNIGWQ 357



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 23/32 (71%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NS+RHNLSLN  F KVPR   E GKG  WRI+
Sbjct: 358 NSVRHNLSLNPAFEKVPRKPHESGKGMKWRIN 389


>gi|259013444|ref|NP_001158465.1| forkhead box C-like protein [Saccoglossus kowalevskii]
 gi|197320543|gb|ACH68433.1| forkhead box C-like protein [Saccoglossus kowalevskii]
          Length = 476

 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR--GVPCFRAP 160
           NSIRHNLSLN  FIKVPR  ++PGKGS+W +DP S +     ++ RRR+R   V   +  
Sbjct: 116 NSIRHNLSLNDCFIKVPRDDKKPGKGSYWSLDPESYNMFDNGSYLRRRKRFKKVDGSKEK 175

Query: 161 FGLSSRCTL 169
            G+S R +L
Sbjct: 176 DGISRRVSL 184



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 66  KDMVKPPYSYIALIAMAIQNAPEKKVTLNGIYQFIMDRFPFYRENKQGWQ 115


>gi|320170913|gb|EFW47812.1| forkhead box S1 [Capsaspora owczarzaki ATCC 30864]
          Length = 800

 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F++VPR   EPGKG+FW IDP  ++   +  F+RR  R
Sbjct: 579 NSIRHNLSLNPCFVRVPRPDSEPGKGAFWTIDPNLQYMFTDTNFKRRHNR 628



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 38/46 (82%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SYA LI QA+  + D++LTL+GIY++IT+++PYY+  D GWQ
Sbjct: 533 KPPFSYATLIAQAINISADRRLTLNGIYTYITEHFPYYKRVDNGWQ 578



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 4/71 (5%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRG--DVDVNMGLSSFISRRH--IEIFFEHPNFFM 90
           A AKLQG   +Y +R   +T+GR  S     VDV++G S FISRRH  IE  F   +F +
Sbjct: 318 AFAKLQGPTIDYCIRSLSVTLGRKPSHNVDSVDVDLGRSKFISRRHAKIEYNFTMRHFEI 377

Query: 91  TCNGKNGVFVD 101
           +  GKNG+ VD
Sbjct: 378 SALGKNGLLVD 388


>gi|122892611|gb|ABM67367.1| FOXI1 [Hylobates klossii]
          Length = 306

 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 97  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 146



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 51  RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 96


>gi|321460278|gb|EFX71322.1| hypothetical protein DAPPUDRAFT_8535 [Daphnia pulex]
          Length = 107

 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 39/51 (76%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S+ + KPP+SY  LI+ A+ S+ +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 3   SKKNEKPPFSYNALIMMAIRSSAEKRLTLNGIYEFIMKNFPYYRDNKQGWQ 53



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 54  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 103


>gi|259013265|ref|NP_001158438.1| forkhead box J1 [Saccoglossus kowalevskii]
 gi|197734661|gb|ACH73226.1| forkhead box J protein [Saccoglossus kowalevskii]
          Length = 450

 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 35/48 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F KVPR ++EPGKG FW+IDP     L    F++RR
Sbjct: 174 NSIRHNLSLNKCFTKVPRRKDEPGKGGFWKIDPAHADVLENGIFKKRR 221



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 29/46 (63%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+      ++TLS IY +I  N+ YY+ A+  WQ
Sbjct: 128 KPPYSYATLICMAMKETKKNKITLSAIYKWIQDNFMYYKVAEPSWQ 173


>gi|328855476|gb|EGG04602.1| hypothetical protein MELLADRAFT_64712 [Melampsora larici-populina
           98AG31]
          Length = 1003

 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 35/47 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN  FIK+PR   EPGKGSFW I PG+E + +   F+++
Sbjct: 457 NSIRHNLSLNESFIKLPRGPNEPGKGSFWAIAPGAEDQFVNGGFKKK 503



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 32/48 (66%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KP YSYA LI QA+  +  K++ L+ IY++I  NY YYR  + GWQ
Sbjct: 409 NDKPTYSYAALIGQAINCSEFKKVCLNDIYAYIMHNYSYYRKDEAGWQ 456


>gi|126290786|ref|XP_001370284.1| PREDICTED: forkhead box protein I1-like isoform 1 [Monodelphis
           domestica]
          Length = 377

 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 168 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 217



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 122 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 167


>gi|395505052|ref|XP_003756860.1| PREDICTED: forkhead box protein I1 [Sarcophilus harrisii]
          Length = 377

 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 168 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 217



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 122 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 167


>gi|1911185|gb|AAB50574.1| forkhead box L1 [Homo sapiens]
          Length = 351

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 142 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 191



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 96  RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 141


>gi|410949252|ref|XP_003981337.1| PREDICTED: forkhead box protein I1 isoform 1 [Felis catus]
          Length = 378

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 124 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 169


>gi|260826664|ref|XP_002608285.1| hypothetical protein BRAFLDRAFT_87965 [Branchiostoma floridae]
 gi|229293636|gb|EEN64295.1| hypothetical protein BRAFLDRAFT_87965 [Branchiostoma floridae]
          Length = 344

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 157 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 206



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +A +K+LTLSGIY ++  N+P+Y+ +  GWQ
Sbjct: 111 RPPYSYSALIAMAIQAAPEKKLTLSGIYQYVADNFPFYKKSKAGWQ 156


>gi|194219613|ref|XP_001500146.2| PREDICTED: forkhead box protein I1-like [Equus caballus]
          Length = 358

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 150 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 199



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 104 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 149


>gi|21618327|ref|NP_036320.2| forkhead box protein I1 isoform a [Homo sapiens]
 gi|150421552|sp|Q12951.3|FOXI1_HUMAN RecName: Full=Forkhead box protein I1; AltName:
           Full=Forkhead-related protein FKHL10; AltName:
           Full=Forkhead-related transcription factor 6;
           Short=FREAC-6; AltName: Full=Hepatocyte nuclear factor 3
           forkhead homolog 3; Short=HFH-3; Short=HNF-3/fork-head
           homolog 3
 gi|119581894|gb|EAW61490.1| forkhead box I1, isoform CRA_b [Homo sapiens]
 gi|208968411|dbj|BAG74044.1| forkhead box I1 [synthetic construct]
 gi|306569445|gb|ADN03217.1| forkhead box I1 [Homo sapiens]
 gi|306569447|gb|ADN03218.1| forkhead box I1 [Homo sapiens]
 gi|306569449|gb|ADN03219.1| forkhead box I1 [Homo sapiens]
 gi|306569451|gb|ADN03220.1| forkhead box I1 [Homo sapiens]
 gi|306569453|gb|ADN03221.1| forkhead box I1 [Homo sapiens]
 gi|306569455|gb|ADN03222.1| forkhead box I1 [Homo sapiens]
 gi|306569457|gb|ADN03223.1| forkhead box I1 [Homo sapiens]
 gi|306569459|gb|ADN03224.1| forkhead box I1 [Homo sapiens]
 gi|306569461|gb|ADN03225.1| forkhead box I1 [Homo sapiens]
 gi|306569463|gb|ADN03226.1| forkhead box I1 [Homo sapiens]
 gi|306569465|gb|ADN03227.1| forkhead box I1 [Homo sapiens]
 gi|306569467|gb|ADN03228.1| forkhead box I1 [Homo sapiens]
 gi|306569469|gb|ADN03229.1| forkhead box I1 [Homo sapiens]
 gi|306569471|gb|ADN03230.1| forkhead box I1 [Homo sapiens]
 gi|306569473|gb|ADN03231.1| forkhead box I1 [Homo sapiens]
 gi|306569475|gb|ADN03232.1| forkhead box I1 [Homo sapiens]
 gi|306569477|gb|ADN03233.1| forkhead box I1 [Homo sapiens]
 gi|306569479|gb|ADN03234.1| forkhead box I1 [Homo sapiens]
 gi|306569481|gb|ADN03235.1| forkhead box I1 [Homo sapiens]
 gi|306569483|gb|ADN03236.1| forkhead box I1 [Homo sapiens]
 gi|306569485|gb|ADN03237.1| forkhead box I1 [Homo sapiens]
 gi|306569487|gb|ADN03238.1| forkhead box I1 [Homo sapiens]
 gi|306569489|gb|ADN03239.1| forkhead box I1 [Homo sapiens]
 gi|306569491|gb|ADN03240.1| forkhead box I1 [Homo sapiens]
 gi|306569493|gb|ADN03241.1| forkhead box I1 [Homo sapiens]
 gi|306569495|gb|ADN03242.1| forkhead box I1 [Homo sapiens]
 gi|306569497|gb|ADN03243.1| forkhead box I1 [Homo sapiens]
 gi|306569499|gb|ADN03244.1| forkhead box I1 [Homo sapiens]
 gi|306569501|gb|ADN03245.1| forkhead box I1 [Homo sapiens]
 gi|306569503|gb|ADN03246.1| forkhead box I1 [Homo sapiens]
 gi|306569505|gb|ADN03247.1| forkhead box I1 [Homo sapiens]
 gi|306569507|gb|ADN03248.1| forkhead box I1 [Homo sapiens]
 gi|306569509|gb|ADN03249.1| forkhead box I1 [Homo sapiens]
 gi|306569511|gb|ADN03250.1| forkhead box I1 [Homo sapiens]
 gi|306569513|gb|ADN03251.1| forkhead box I1 [Homo sapiens]
 gi|306569515|gb|ADN03252.1| forkhead box I1 [Homo sapiens]
 gi|306569517|gb|ADN03253.1| forkhead box I1 [Homo sapiens]
 gi|306569519|gb|ADN03254.1| forkhead box I1 [Homo sapiens]
 gi|306569521|gb|ADN03255.1| forkhead box I1 [Homo sapiens]
 gi|306569523|gb|ADN03256.1| forkhead box I1 [Homo sapiens]
 gi|306569525|gb|ADN03257.1| forkhead box I1 [Homo sapiens]
 gi|306569527|gb|ADN03258.1| forkhead box I1 [Homo sapiens]
 gi|306569529|gb|ADN03259.1| forkhead box I1 [Homo sapiens]
 gi|306569531|gb|ADN03260.1| forkhead box I1 [Homo sapiens]
 gi|306569533|gb|ADN03261.1| forkhead box I1 [Homo sapiens]
 gi|306569535|gb|ADN03262.1| forkhead box I1 [Homo sapiens]
 gi|306569537|gb|ADN03263.1| forkhead box I1 [Homo sapiens]
 gi|306569539|gb|ADN03264.1| forkhead box I1 [Homo sapiens]
 gi|306569541|gb|ADN03265.1| forkhead box I1 [Homo sapiens]
 gi|306569543|gb|ADN03266.1| forkhead box I1 [Homo sapiens]
 gi|306569545|gb|ADN03267.1| forkhead box I1 [Homo sapiens]
 gi|306569547|gb|ADN03268.1| forkhead box I1 [Homo sapiens]
 gi|306569549|gb|ADN03269.1| forkhead box I1 [Homo sapiens]
 gi|306569551|gb|ADN03270.1| forkhead box I1 [Homo sapiens]
 gi|306569553|gb|ADN03271.1| forkhead box I1 [Homo sapiens]
 gi|306569555|gb|ADN03272.1| forkhead box I1 [Homo sapiens]
 gi|306569557|gb|ADN03273.1| forkhead box I1 [Homo sapiens]
 gi|306569559|gb|ADN03274.1| forkhead box I1 [Homo sapiens]
 gi|306569561|gb|ADN03275.1| forkhead box I1 [Homo sapiens]
 gi|306569563|gb|ADN03276.1| forkhead box I1 [Homo sapiens]
 gi|306569565|gb|ADN03277.1| forkhead box I1 [Homo sapiens]
 gi|306569567|gb|ADN03278.1| forkhead box I1 [Homo sapiens]
 gi|306569569|gb|ADN03279.1| forkhead box I1 [Homo sapiens]
 gi|306569571|gb|ADN03280.1| forkhead box I1 [Homo sapiens]
 gi|306569573|gb|ADN03281.1| forkhead box I1 [Homo sapiens]
 gi|306569575|gb|ADN03282.1| forkhead box I1 [Homo sapiens]
 gi|306569577|gb|ADN03283.1| forkhead box I1 [Homo sapiens]
 gi|306569579|gb|ADN03284.1| forkhead box I1 [Homo sapiens]
 gi|306569581|gb|ADN03285.1| forkhead box I1 [Homo sapiens]
 gi|306569583|gb|ADN03286.1| forkhead box I1 [Homo sapiens]
 gi|306569585|gb|ADN03287.1| forkhead box I1 [Homo sapiens]
 gi|306569587|gb|ADN03288.1| forkhead box I1 [Homo sapiens]
 gi|306569589|gb|ADN03289.1| forkhead box I1 [Homo sapiens]
 gi|306569591|gb|ADN03290.1| forkhead box I1 [Homo sapiens]
 gi|306569593|gb|ADN03291.1| forkhead box I1 [Homo sapiens]
 gi|306569595|gb|ADN03292.1| forkhead box I1 [Homo sapiens]
 gi|306569597|gb|ADN03293.1| forkhead box I1 [Homo sapiens]
 gi|306569599|gb|ADN03294.1| forkhead box I1 [Homo sapiens]
 gi|306569601|gb|ADN03295.1| forkhead box I1 [Homo sapiens]
 gi|306569603|gb|ADN03296.1| forkhead box I1 [Homo sapiens]
 gi|306569605|gb|ADN03297.1| forkhead box I1 [Homo sapiens]
 gi|306569607|gb|ADN03298.1| forkhead box I1 [Homo sapiens]
 gi|306569609|gb|ADN03299.1| forkhead box I1 [Homo sapiens]
 gi|306569611|gb|ADN03300.1| forkhead box I1 [Homo sapiens]
 gi|306569613|gb|ADN03301.1| forkhead box I1 [Homo sapiens]
 gi|306569615|gb|ADN03302.1| forkhead box I1 [Homo sapiens]
 gi|306569617|gb|ADN03303.1| forkhead box I1 [Homo sapiens]
 gi|306569619|gb|ADN03304.1| forkhead box I1 [Homo sapiens]
 gi|306569621|gb|ADN03305.1| forkhead box I1 [Homo sapiens]
 gi|306569623|gb|ADN03306.1| forkhead box I1 [Homo sapiens]
 gi|306569625|gb|ADN03307.1| forkhead box I1 [Homo sapiens]
 gi|306569627|gb|ADN03308.1| forkhead box I1 [Homo sapiens]
 gi|306569629|gb|ADN03309.1| forkhead box I1 [Homo sapiens]
 gi|306569631|gb|ADN03310.1| forkhead box I1 [Homo sapiens]
 gi|306569633|gb|ADN03311.1| forkhead box I1 [Homo sapiens]
 gi|306569635|gb|ADN03312.1| forkhead box I1 [Homo sapiens]
 gi|306569637|gb|ADN03313.1| forkhead box I1 [Homo sapiens]
 gi|306569639|gb|ADN03314.1| forkhead box I1 [Homo sapiens]
 gi|306569641|gb|ADN03315.1| forkhead box I1 [Homo sapiens]
 gi|306569643|gb|ADN03316.1| forkhead box I1 [Homo sapiens]
 gi|306569645|gb|ADN03317.1| forkhead box I1 [Homo sapiens]
 gi|306569647|gb|ADN03318.1| forkhead box I1 [Homo sapiens]
 gi|306569649|gb|ADN03319.1| forkhead box I1 [Homo sapiens]
 gi|306569653|gb|ADN03321.1| forkhead box I1 [Homo sapiens]
 gi|306569655|gb|ADN03322.1| forkhead box I1 [Homo sapiens]
 gi|306569657|gb|ADN03323.1| forkhead box I1 [Homo sapiens]
 gi|306569659|gb|ADN03324.1| forkhead box I1 [Homo sapiens]
 gi|306569661|gb|ADN03325.1| forkhead box I1 [Homo sapiens]
 gi|306569663|gb|ADN03326.1| forkhead box I1 [Homo sapiens]
 gi|306569665|gb|ADN03327.1| forkhead box I1 [Homo sapiens]
 gi|306569667|gb|ADN03328.1| forkhead box I1 [Homo sapiens]
 gi|306569669|gb|ADN03329.1| forkhead box I1 [Homo sapiens]
 gi|306569671|gb|ADN03330.1| forkhead box I1 [Homo sapiens]
 gi|306569673|gb|ADN03331.1| forkhead box I1 [Homo sapiens]
 gi|306569675|gb|ADN03332.1| forkhead box I1 [Homo sapiens]
 gi|306569677|gb|ADN03333.1| forkhead box I1 [Homo sapiens]
 gi|306569679|gb|ADN03334.1| forkhead box I1 [Homo sapiens]
 gi|306569681|gb|ADN03335.1| forkhead box I1 [Homo sapiens]
 gi|306569683|gb|ADN03336.1| forkhead box I1 [Homo sapiens]
          Length = 378

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|55625400|ref|XP_527110.1| PREDICTED: forkhead box protein I1 isoform 2 [Pan troglodytes]
          Length = 378

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|344265249|ref|XP_003404697.1| PREDICTED: forkhead box protein I1 isoform 1 [Loxodonta africana]
          Length = 378

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 124 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 169


>gi|306569651|gb|ADN03320.1| forkhead box I1 [Homo sapiens]
          Length = 378

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|238054023|ref|NP_001153932.1| forkhead box I2 [Oryzias latipes]
 gi|226441736|gb|ACO57470.1| forkhead box I2 [Oryzias latipes]
          Length = 391

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 179 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 228



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +AH+K+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 133 RPPYSYSALIAMAIQNAHEKKLTLSQIYQYVADNFPFYKKSKAGWQ 178


>gi|148221999|ref|NP_001080367.1| forkhead box protein I1-ema [Xenopus laevis]
 gi|82241632|sp|Q7ZYQ0.1|FXI1E_XENLA RecName: Full=Forkhead box protein I1-ema; Short=FoxI1-ema;
           AltName: Full=Ectodermally-expressed mesendoderm
           antagonist; Short=Xema; AltName: Full=FoxI3
 gi|27769129|gb|AAH42303.1| Foxi1 protein [Xenopus laevis]
 gi|66356298|gb|AAY45746.1| ectodermally-expressed mesendoderm antagonist [Xenopus laevis]
          Length = 373

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|426350939|ref|XP_004043020.1| PREDICTED: forkhead box protein I1 isoform 1 [Gorilla gorilla
           gorilla]
          Length = 378

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|47216800|emb|CAG10122.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 387

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 178 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 227



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 132 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 177


>gi|395817082|ref|XP_003782004.1| PREDICTED: forkhead box protein I1 [Otolemur garnettii]
          Length = 380

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 124 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 169


>gi|158257784|dbj|BAF84865.1| unnamed protein product [Homo sapiens]
          Length = 378

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|300795307|ref|NP_001179172.1| forkhead box protein I1 [Bos taurus]
 gi|296475947|tpg|DAA18062.1| TPA: forkhead box I1-like isoform 1 [Bos taurus]
          Length = 379

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 124 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 169


>gi|73953482|ref|XP_546245.2| PREDICTED: forkhead box protein I1 isoform 1 [Canis lupus
           familiaris]
          Length = 378

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 124 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 169


>gi|348539150|ref|XP_003457052.1| PREDICTED: hypothetical protein LOC100693567 [Oreochromis
           niloticus]
          Length = 580

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 36/54 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPC 156
           NSIRHNLSLN  F KVPR + +PGKG++W +DP  E       FRR+R+R   C
Sbjct: 348 NSIRHNLSLNDCFQKVPRDERDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKNDC 401



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 4/56 (7%)

Query: 284 ISQDDS----KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            SQDD     +PPYSY+ LI  A+ SA +++LTLS IY +++ N+P+Y  +  GWQ
Sbjct: 292 FSQDDMLSLVRPPYSYSALIAMAIKSAPEQRLTLSQIYQYVSDNFPFYSRSKAGWQ 347


>gi|397479307|ref|XP_003810966.1| PREDICTED: forkhead box protein I1 isoform 1 [Pan paniscus]
          Length = 378

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|410914142|ref|XP_003970547.1| PREDICTED: forkhead box protein I1-ema-like [Takifugu rubripes]
          Length = 387

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 178 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 227



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 132 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 177


>gi|359070184|ref|XP_002691400.2| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein I3 [Bos
           taurus]
          Length = 422

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 192 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 241



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 146 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 191


>gi|296193696|ref|XP_002744628.1| PREDICTED: forkhead box protein I1 [Callithrix jacchus]
          Length = 378

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|297676609|ref|XP_002816222.1| PREDICTED: forkhead box protein I1 isoform 1 [Pongo abelii]
          Length = 378

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|355689094|gb|AER98716.1| forkhead box J1 [Mustela putorius furo]
          Length = 181

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/40 (70%), Positives = 33/40 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI 142
           NSIRHNLSLN+ FIKVPR ++EPGKG FWRIDP    +L+
Sbjct: 138 NSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLV 177



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY +IT N+ Y+R AD  WQ
Sbjct: 92  KPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQ 137


>gi|344247556|gb|EGW03660.1| Forkhead box protein I3 [Cricetulus griseus]
          Length = 269

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 51  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 100



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ S+ +++LTLS IY F+  N+P+Y+ +  GWQ
Sbjct: 5   RPPYSYSALIAMAIQSSPERKLTLSHIYQFVADNFPFYQRSKAGWQ 50


>gi|38708001|ref|NP_944600.1| forkhead box protein I1 [Danio rerio]
 gi|33087231|gb|AAP92810.1| forkhead transcription factor i3b [Danio rerio]
          Length = 383

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 176 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 225



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A +++LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 130 RPPYSYSALIAMAIHGAPERRLTLSQIYQYVADNFPFYNKSKAGWQ 175


>gi|403290199|ref|XP_003936217.1| PREDICTED: forkhead box protein I1 [Saimiri boliviensis
           boliviensis]
          Length = 378

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|351701158|gb|EHB04077.1| Forkhead box protein I1 [Heterocephalus glaber]
          Length = 379

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 124 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 169


>gi|301792407|ref|XP_002931169.1| PREDICTED: forkhead box protein I1-like [Ailuropoda melanoleuca]
 gi|281349077|gb|EFB24661.1| hypothetical protein PANDA_021986 [Ailuropoda melanoleuca]
          Length = 378

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 124 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 169


>gi|449267248|gb|EMC78214.1| Forkhead box protein I1-ema [Columba livia]
          Length = 375

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A +K+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPEKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|157786598|ref|NP_001099246.1| forkhead box protein I1 [Rattus norvegicus]
 gi|149052268|gb|EDM04085.1| forkhead box I1 (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 372

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 163 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 212



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A D++LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 117 RPPYSYSALIAMAIHGAPDQRLTLSQIYQYVADNFPFYNKSKAGWQ 162


>gi|348520610|ref|XP_003447820.1| PREDICTED: forkhead box protein I1c-like [Oreochromis niloticus]
          Length = 398

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 179 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 228



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +AH+K+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 133 RPPYSYSALIAMAIQNAHEKKLTLSQIYQYVADNFPFYKKSKAGWQ 178


>gi|190336912|gb|AAI62636.1| Forkhead box I3b [Danio rerio]
 gi|190339436|gb|AAI62346.1| Forkhead box I3b [Danio rerio]
          Length = 383

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 176 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 225



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A +++LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 130 RPPYSYSALIAMAIHGAPERRLTLSQIYQYVADNFPFYNKSKAGWQ 175


>gi|311273948|ref|XP_003134114.1| PREDICTED: forkhead box protein I1 isoform 1 [Sus scrofa]
          Length = 378

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 124 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 169


>gi|444515198|gb|ELV10787.1| Forkhead box protein I3 [Tupaia chinensis]
          Length = 267

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 36  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 85



 Score = 41.2 bits (95), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 25/34 (73%)

Query: 302 AVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 2   AIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 35


>gi|326928283|ref|XP_003210310.1| PREDICTED: forkhead box protein I1-ema-like [Meleagris gallopavo]
          Length = 375

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A +K+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPEKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|242019777|ref|XP_002430335.1| Fork head domain transcription factor slp1, putative [Pediculus
           humanus corporis]
 gi|212515459|gb|EEB17597.1| Fork head domain transcription factor slp1, putative [Pediculus
           humanus corporis]
          Length = 402

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 10/72 (13%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NS+RHNLSLN  F+K+P+S   PGKG +W IDP S+   +E +FRRR          P G
Sbjct: 174 NSVRHNLSLNECFVKLPKSMGRPGKGHYWTIDPSSDSMFVEGSFRRR----------PRG 223

Query: 163 LSSRCTLRFPST 174
              +C    P +
Sbjct: 224 FKRKCQTLKPGS 235



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP SY  LI  A+ ++  K+LTL+ IY+++ + Y ++R A +GW+
Sbjct: 128 KPPLSYIALIAMAIQNSPTKKLTLNEIYTYLQQRYDFFRGAYQGWK 173


>gi|129270185|ref|NP_944599.2| forkhead box I3a [Danio rerio]
 gi|126631958|gb|AAI33873.1| Forkhead box I3a [Danio rerio]
          Length = 353

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KVPR   +PGKG++W +DP  E       FRR+R+R
Sbjct: 162 NSIRHNLSLNDCFMKVPRDDSDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 211



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 31/46 (67%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A +++LTLS IY ++  N+P+Y  +   WQ
Sbjct: 116 RPPYSYSALIAMAIHGAPNRRLTLSQIYQYVADNFPFYNKSKASWQ 161


>gi|47226110|emb|CAG04484.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 215

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 34/48 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F KVPR + EPGKG FW+IDP      +   F+RRR
Sbjct: 168 NSIRHNLSLNKCFKKVPRQKNEPGKGGFWQIDPQYADMFVNGIFKRRR 215



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   ++TLS IY++IT+N+ YYR A+  WQ
Sbjct: 122 KPPYSYASLICMAMQASQQPKVTLSTIYNWITENFCYYRHAEPSWQ 167


>gi|390348308|ref|XP_787062.2| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC581992
           [Strongylocentrotus purpuratus]
          Length = 341

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR+  +PGKG +W +DP  E       FRR+R+R
Sbjct: 167 NSIRHNLSLNDCFIKVPRADNDPGKGHYWTLDPNCEKMFDNGNFRRKRKR 216



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 3/70 (4%)

Query: 269 YAAAHTNVVNHMSLSISQDDSK---PPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYP 325
           Y  A  + ++ +SL+   D  K   PPYSY+ LI  A+ S+ D ++TLSGIY ++ +N+P
Sbjct: 97  YFPATVDNLSWLSLAAHHDFYKLVRPPYSYSALIAMAIQSSPDHKITLSGIYRYVAENFP 156

Query: 326 YYRTADKGWQ 335
           +Y+ +  GWQ
Sbjct: 157 FYKRSKAGWQ 166


>gi|311272025|ref|XP_001928269.2| PREDICTED: forkhead box protein I2-like [Sus scrofa]
          Length = 312

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 143 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 192



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA  ++LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 97  RPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQ 142


>gi|431918131|gb|ELK17359.1| Forkhead box protein I1 [Pteropus alecto]
          Length = 377

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 171 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 220



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 125 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 170


>gi|33087229|gb|AAP92809.1| forkhead transcription factor i3 [Danio rerio]
          Length = 353

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KVPR   +PGKG++W +DP  E       FRR+R+R
Sbjct: 162 NSIRHNLSLNDCFMKVPRDDSDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 211



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 31/46 (67%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A ++++TLS IY ++  N+P+Y  +   WQ
Sbjct: 116 RPPYSYSALIAMAIHGAPNRRVTLSQIYQYVADNFPFYNKSKASWQ 161


>gi|45360553|ref|NP_988949.1| forkhead box protein I1-ema [Xenopus (Silurana) tropicalis]
 gi|82186634|sp|Q6P8A3.1|FXI1E_XENTR RecName: Full=Forkhead box protein I1-ema; Short=FoxI1-ema;
           AltName: Full=Ectodermally-expressed mesendoderm
           antagonist; AltName: Full=FoxI3
 gi|38174713|gb|AAH61326.1| forkhead box I1 [Xenopus (Silurana) tropicalis]
          Length = 373

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|332239002|ref|XP_003268693.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein I1 [Nomascus
           leucogenys]
          Length = 378

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK++TLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRITLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|346972003|gb|EGY15455.1| forkhead box protein K2 [Verticillium dahliae VdLs.17]
          Length = 672

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 11/144 (7%)

Query: 201 VGVMGNPATSSLLPPLRINIPDHPHTEISSS-----PFPSPTGTISAANSCPTSPRGLHN 255
           +G+     TS + PP      D P +   +S     PF  P          P +P     
Sbjct: 234 LGIPKQDVTSPIPPPSAAGPSDEPPSSQPASSGRSQPFRQPIAPAPPDYKRPGTPPSA-- 291

Query: 256 RRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDS---KPPYSYAQLIVQAVASAHDKQLT 312
           R  V +  H +  Y+++ T +++   + +SQDD+   KP +SYAQ+I QA+ +  D +L 
Sbjct: 292 RSKVLSAQHKSPGYSSSGTLLLSANDVDLSQDDNRHIKPQFSYAQMITQAIINTPDGKLN 351

Query: 313 LSGIYSFITKNYPYYR-TADKGWQ 335
           L+GIY+FIT NY YYR     GWQ
Sbjct: 352 LNGIYNFITANYAYYRHQPAAGWQ 375



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 31/44 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN+ F K+ RS +EPGKG  W+I P +  ++   A+
Sbjct: 376 NSIRHNLSLNKSFDKIARSTDEPGKGMKWQIVPEAREEMTRTAY 419



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 16/92 (17%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNS--------------SRGDVDVNMGLSSFISRRHIE 80
           A AK+  +++ + V +  + IGR +              S   V +++G S  +SRRH  
Sbjct: 106 AYAKIAAQDWTFYVTKLNVNIGRAADPAASGTQQQEDPESDDFVHIDLGPSKLVSRRHAR 165

Query: 81  IFF--EHPNFFMTCNGKNGVFVDGNSIRHNLS 110
           IFF  E  ++F+   G+NGV  + + ++   S
Sbjct: 166 IFFNSEDESWFLEVIGRNGVKANNSPLKQGTS 197


>gi|354483541|ref|XP_003503951.1| PREDICTED: forkhead box protein I3-like [Cricetulus griseus]
          Length = 322

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 104 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 153



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ S+ +++LTLS IY F+  N+P+Y+ +  GWQ
Sbjct: 58  RPPYSYSALIAMAIQSSPERKLTLSHIYQFVADNFPFYQRSKAGWQ 103


>gi|307214241|gb|EFN89347.1| Forkhead box protein G1 [Harpegnathos saltator]
          Length = 417

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 40/65 (61%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP SE   I     + R+R     R+   
Sbjct: 158 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRRTTAASRSRLA 217

Query: 163 LSSRC 167
              RC
Sbjct: 218 AYKRC 222



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 31/43 (72%)

Query: 293 YSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           YSY  LI+ A+  + +K+LTL+GIY +I +++PYY    +GWQ
Sbjct: 115 YSYNALIMMAIRQSPEKRLTLNGIYEYIMRHFPYYENNKQGWQ 157


>gi|301773936|ref|XP_002922377.1| PREDICTED: forkhead box protein I3-like, partial [Ailuropoda
           melanoleuca]
          Length = 296

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 67  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 116



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 21  RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 66


>gi|281339172|gb|EFB14756.1| hypothetical protein PANDA_011349 [Ailuropoda melanoleuca]
          Length = 291

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 62  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 111



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 16  RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 61


>gi|410898790|ref|XP_003962880.1| PREDICTED: forkhead box protein I1c-like [Takifugu rubripes]
          Length = 398

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 184 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 233



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +AH+K+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 138 RPPYSYSALIAMAIQNAHEKKLTLSQIYQYVADNFPFYKKSKAGWQ 183


>gi|313211945|emb|CBY16051.1| unnamed protein product [Oikopleura dioica]
          Length = 464

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPC 156
           NSIRHNLSLN  F+K+PR +++PGKGS+W +DP + +     ++ RRR+R   C
Sbjct: 130 NSIRHNLSLNECFVKIPRDEKKPGKGSYWTLDPDAYNMFENGSYLRRRKRFKKC 183



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 3/67 (4%)

Query: 269 YAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYR 328
           Y+A  T+   H+     +D  KPPYSY  LI  A+ S   K++TL+GIYSFI + +PYYR
Sbjct: 66  YSATVTSTAPHLQ---PKDMVKPPYSYIALIAMAINSEPTKKITLNGIYSFIMERFPYYR 122

Query: 329 TADKGWQ 335
              +GWQ
Sbjct: 123 ENKQGWQ 129


>gi|121223212|gb|ABM47718.1| FOXI1 [Saguinus labiatus]
          Length = 221

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 109 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 158



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 63  RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 108


>gi|291387800|ref|XP_002710417.1| PREDICTED: forkhead box I1 isoform 1 [Oryctolagus cuniculus]
          Length = 375

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVPREEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 124 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 169


>gi|444726746|gb|ELW67266.1| Forkhead box protein I2 [Tupaia chinensis]
          Length = 357

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 189 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 238



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 3/63 (4%)

Query: 276 VVNHMSLSISQDD---SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADK 332
            V  +SLS  Q+     +PPYSY+ LI  A+ SA  ++LTLS IY ++  N+P+Y+ +  
Sbjct: 126 AVTWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPLRKLTLSQIYQYVASNFPFYKRSKA 185

Query: 333 GWQ 335
           GWQ
Sbjct: 186 GWQ 188


>gi|50754836|ref|XP_425185.1| PREDICTED: forkhead box protein I1-ema isoform 2 [Gallus gallus]
          Length = 375

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A +K+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPEKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|332239284|ref|XP_003268836.1| PREDICTED: forkhead box protein I3 [Nomascus leucogenys]
          Length = 420

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 191 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 240



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 145 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 190


>gi|224068210|ref|XP_002194993.1| PREDICTED: forkhead box protein I1-ema-like [Taeniopygia guttata]
          Length = 375

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|208431824|ref|NP_001129121.1| forkhead box protein I3 [Homo sapiens]
 gi|229464468|sp|A8MTJ6.3|FOXI3_HUMAN RecName: Full=Forkhead box protein I3
 gi|205362900|tpe|CAR63508.1| TPA: forkhead box I3 [Homo sapiens]
 gi|205362902|tpe|CAR63509.1| TPA: forkhead box I3 [Homo sapiens]
          Length = 420

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 191 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 240



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 145 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 190


>gi|297266491|ref|XP_001088994.2| PREDICTED: forkhead box protein I3-like, partial [Macaca mulatta]
          Length = 323

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 94  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 143



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 48  RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 93


>gi|296482509|tpg|DAA24624.1| TPA: forkhead box I3-like [Bos taurus]
          Length = 414

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 184 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 233



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 138 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 183


>gi|432100004|gb|ELK28897.1| Forkhead box protein I1 [Myotis davidii]
          Length = 366

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 162 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 211



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  ++P+Y  +  GWQ
Sbjct: 116 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADHFPFYNKSKAGWQ 161


>gi|339235983|ref|XP_003379546.1| forkhead box protein G1 [Trichinella spiralis]
 gi|316977788|gb|EFV60845.1| forkhead box protein G1 [Trichinella spiralis]
          Length = 362

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 44/69 (63%)

Query: 267 AHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPY 326
           ++ +A+     N  S    + + KPP+SY  LI+ A+  + +K+LTLSGIY FI KN+PY
Sbjct: 67  SNKSASPEKSCNDKSDCSGEKNDKPPFSYNALIMMAIRQSPEKRLTLSGIYEFIIKNFPY 126

Query: 327 YRTADKGWQ 335
           YR   +GWQ
Sbjct: 127 YRENKQGWQ 135



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ FIKVPR  ++PGKG++W +DP  E   I  +  + R+R
Sbjct: 136 NSIRHNLSLNKCFIKVPRHYDDPGKGNYWMVDPSCEDAFIGSSTGKLRRR 185


>gi|82706202|gb|ABB89485.1| forkhead transcription factor I [Strongylocentrotus purpuratus]
          Length = 316

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR+  +PGKG +W +DP  E       FRR+R+R
Sbjct: 142 NSIRHNLSLNDCFIKVPRADNDPGKGHYWTLDPNCEKMFDNGNFRRKRKR 191



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 3/70 (4%)

Query: 269 YAAAHTNVVNHMSLSISQDDSK---PPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYP 325
           Y  A  + ++ +SL+   D  K   PPYSY+ LI  A+ S+ D ++TLSGIY ++ +N+P
Sbjct: 72  YFPATVDNLSWLSLAAHHDFYKLVRPPYSYSALIAMAIQSSPDHKITLSGIYRYVAENFP 131

Query: 326 YYRTADKGWQ 335
           +Y+ +  GWQ
Sbjct: 132 FYKRSKAGWQ 141


>gi|348516711|ref|XP_003445881.1| PREDICTED: forkhead box protein I1-ema-like [Oreochromis niloticus]
          Length = 392

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 178 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 227



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 132 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 177


>gi|296223323|ref|XP_002757613.1| PREDICTED: forkhead box protein I3 [Callithrix jacchus]
          Length = 346

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 118 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 167



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 72  RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 117


>gi|440891442|gb|ELR45124.1| Forkhead box protein I3, partial [Bos grunniens mutus]
          Length = 294

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 64  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 113



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 18  RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 63


>gi|297460002|ref|XP_002700845.1| PREDICTED: forkhead box protein I3, partial [Bos taurus]
          Length = 307

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 77  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 126



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 31  RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 76


>gi|189235432|ref|XP_001812698.1| PREDICTED: similar to forkhead protein/ forkhead protein domain
           [Tribolium castaneum]
 gi|270003561|gb|EFA00009.1| hypothetical protein TcasGA2_TC002813 [Tribolium castaneum]
          Length = 342

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 3/67 (4%)

Query: 269 YAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYR 328
           YAA H        LS ++D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +PYYR
Sbjct: 43  YAAWHHQ---QHQLSTAKDMVKPPYSYIALIAMAIQNAPDKKITLNGIYQFIMERFPYYR 99

Query: 329 TADKGWQ 335
              +GWQ
Sbjct: 100 ENKQGWQ 106



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 107 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 141


>gi|332813754|ref|XP_525808.3| PREDICTED: forkhead box protein I3, partial [Pan troglodytes]
          Length = 393

 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 164 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 213



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 118 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 163


>gi|395853566|ref|XP_003799276.1| PREDICTED: forkhead box protein I3, partial [Otolemur garnettii]
          Length = 316

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 87  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 136



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +A +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 41  RPPYSYSALIAMAIQNAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 86


>gi|340373645|ref|XP_003385351.1| PREDICTED: forkhead box protein J3-like [Amphimedon queenslandica]
          Length = 501

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 63/133 (47%), Gaps = 12/133 (9%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPG----SEHKLIEQAFRRRRQRGVPCFR 158
           NSIRHNLSLN+ F KVPR +E+PGKGS+W IDP     S   L    F R+R+       
Sbjct: 147 NSIRHNLSLNKCFQKVPRPKEDPGKGSYWEIDPSPLEDSSETLSSSGFPRKRKTSDKVL- 205

Query: 159 APFGLSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSL-LPPLR 217
               LS   T+          F+       P+PT   +    V     P+T SL  PPL 
Sbjct: 206 --LTLSVEDTISPADIRKEKSFKPTPANGSPSPTLSEL----VSYSKRPSTYSLPPPPLH 259

Query: 218 INIPDHPHTEISS 230
            ++P    T+ S+
Sbjct: 260 SHVPSTGQTDFST 272



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D+KPPYSYA LI  A+ S+  +++TL+ IY++I  N+PYYR A  GW+
Sbjct: 99  DAKPPYSYATLITYAINSSPKRRMTLNEIYTWICNNFPYYREAGTGWK 146


>gi|355691833|gb|EHH27018.1| hypothetical protein EGK_17116 [Macaca mulatta]
          Length = 378

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR  ++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDDDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|208431808|ref|NP_001129118.1| forkhead box protein I3 [Canis lupus familiaris]
 gi|238066641|sp|B5RHS5.1|FOXI3_CANFA RecName: Full=Forkhead box protein I3
 gi|205271042|emb|CAQ53186.1| forkhead box I3 [Canis lupus familiaris]
          Length = 436

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 204 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 253



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 158 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 203


>gi|380474466|emb|CCF45764.1| fork head domain-containing protein [Colletotrichum higginsianum]
          Length = 663

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 14/134 (10%)

Query: 214 PPLRINIPDHPHTEISSS-------PFPSPTGTISAANSCP-TSPRGLHNRRNVSADLHM 265
           P  R ++P+ P + + S+        F  P     A    P T P  +  +   S   H 
Sbjct: 233 PQPRTDLPEEPSSALGSTIRSSRGQQFRQPIAPAPADYKRPGTPPSAIRGKPTPSQ--HK 290

Query: 266 AAHYAAAHTNVVNHMSLSISQDDSK---PPYSYAQLIVQAVASAHDKQLTLSGIYSFITK 322
           + HY+++ T ++N   + +S DD+K   P YSYAQ+I QA+ +  + +L L+GIY+FI  
Sbjct: 291 SPHYSSSGTLLLNSNDIDLSLDDNKHIKPQYSYAQMITQAIMNTSEGKLNLNGIYNFIMN 350

Query: 323 NYPYYRTAD-KGWQ 335
           NY YYR     GWQ
Sbjct: 351 NYAYYRHQQAAGWQ 364



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 33/45 (73%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           NSIRHNLSLN+ F KV RS +EPGKG  W+I P +  ++I  A++
Sbjct: 365 NSIRHNLSLNKAFDKVARSTDEPGKGMKWQIVPEARDEMIRTAYK 409


>gi|190576693|gb|ACE79154.1| winged helix/forkhead transcription factor FoxC [Branchiostoma
           floridae]
          Length = 486

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR  ++PGKGS+W +DP S +     ++ RRR+R
Sbjct: 131 NSIRHNLSLNECFIKVPRDDKKPGKGSYWSLDPDSYNMFDNGSYLRRRRR 180



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 36/51 (70%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S+D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +PYYR   +GWQ
Sbjct: 80  SKDMVKPPYSYIALIAMAIQNAPDKKVTLNGIYQFIMDRFPYYRENKQGWQ 130


>gi|109079702|ref|XP_001092246.1| PREDICTED: forkhead box protein I1 isoform 2 [Macaca mulatta]
 gi|402873365|ref|XP_003900548.1| PREDICTED: forkhead box protein I1 [Papio anubis]
          Length = 378

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR  ++PGKG++W +DP  E       FRR+R+R
Sbjct: 169 NSIRHNLSLNDCFKKVPRDDDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 168


>gi|156363335|ref|XP_001626000.1| predicted protein [Nematostella vectensis]
 gi|156212860|gb|EDO33900.1| predicted protein [Nematostella vectensis]
          Length = 456

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           QD  KPPYSY  LI  A+ SA +K++TLSGIYSFI   +PYYR   +GWQ
Sbjct: 75  QDMVKPPYSYIALIAMAIQSAPEKRITLSGIYSFIMDRFPYYRNNKQGWQ 124



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 45/88 (51%), Gaps = 25/88 (28%)

Query: 50  QKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNL 109
           +KRIT+             G+ SFI  R          F    N K G     NSIRHNL
Sbjct: 97  EKRITLS------------GIYSFIMDR----------FPYYRNNKQGW---QNSIRHNL 131

Query: 110 SLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           SLN  F+KVPR  ++PGKGSFW +DP S
Sbjct: 132 SLNECFVKVPRDDKKPGKGSFWMLDPDS 159


>gi|313213355|emb|CBY37180.1| unnamed protein product [Oikopleura dioica]
          Length = 382

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 39/54 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPC 156
           NSIRHNLSLN  F+K+PR +++PGKGS+W +DP + +     ++ RRR+R   C
Sbjct: 48  NSIRHNLSLNECFVKIPRDEKKPGKGSYWTLDPDAYNMFENGSYLRRRKRFKKC 101



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ S   K++TL+GIYSFI + +PYYR   +GWQ
Sbjct: 2   KPPYSYIALIAMAINSEPTKKITLNGIYSFIMERFPYYRENKQGWQ 47


>gi|119597477|gb|EAW77071.1| hCG33270 [Homo sapiens]
          Length = 516

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 49  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 98



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 3   RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 48


>gi|355750411|gb|EHH54749.1| hypothetical protein EGM_15643 [Macaca fascicularis]
          Length = 350

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR  ++PGKG++W +DP  E       FRR+R+R
Sbjct: 141 NSIRHNLSLNDCFKKVPRDDDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 190



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A DK+LTLS IY ++  N+P+Y  +  GWQ
Sbjct: 95  RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQ 140


>gi|195426399|ref|XP_002061322.1| GK20787 [Drosophila willistoni]
 gi|194157407|gb|EDW72308.1| GK20787 [Drosophila willistoni]
          Length = 467

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 125 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 174



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 79  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 124


>gi|426336324|ref|XP_004031425.1| PREDICTED: forkhead box protein I3 [Gorilla gorilla gorilla]
          Length = 374

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 145 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 194



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 99  RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 144


>gi|74419010|gb|ABA03230.1| forkhead domain protein C [Nematostella vectensis]
          Length = 456

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           QD  KPPYSY  LI  A+ SA +K++TLSGIYSFI   +PYYR   +GWQ
Sbjct: 75  QDMVKPPYSYIALIAMAIQSAPEKRITLSGIYSFIMDRFPYYRNNXQGWQ 124



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/35 (71%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGSFW +DP S
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSFWMLDPDS 159


>gi|50344340|emb|CAE51212.1| forkhead foxL2 [Suberites domuncula]
          Length = 275

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 35/49 (71%)

Query: 287 DDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D KPPYSY  LI  ++A + DK+LTLSGIY +I  N+PYY    KGWQ
Sbjct: 34  EDVKPPYSYVALIAMSIAKSPDKRLTLSGIYQYIMDNFPYYAKNKKGWQ 82



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVP 155
           NSIRHNLSLN  F+KVP+   +  KG++W +D   E    +  F+RR++   P
Sbjct: 83  NSIRHNLSLNECFVKVPKEGGD-RKGNYWTLDESCEEMFEKGNFKRRKRMKRP 134


>gi|297667147|ref|XP_002811854.1| PREDICTED: forkhead box protein I3 [Pongo abelii]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 112 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 161


>gi|449501478|ref|XP_004176872.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein I1c-like
           [Taeniopygia guttata]
          Length = 399

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 181 NSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 230



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY ++ +N+P+Y+ +  GWQ
Sbjct: 135 RPPYSYSALIAMAIQSAPERKLTLSHIYQYVAENFPFYKRSKAGWQ 180


>gi|345496496|ref|XP_001601800.2| PREDICTED: hypothetical protein LOC100117617 [Nasonia vitripennis]
          Length = 503

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     ++ RRR+R
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDSYNMFDNGSYLRRRRR 166



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +PYYR   +GWQ
Sbjct: 67  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPYYRENKQGWQ 116


>gi|426226364|ref|XP_004007314.1| PREDICTED: forkhead box protein I3 [Ovis aries]
          Length = 364

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 134 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 183



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 88  RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 133


>gi|195122164|ref|XP_002005582.1| GI20546 [Drosophila mojavensis]
 gi|193910650|gb|EDW09517.1| GI20546 [Drosophila mojavensis]
          Length = 481

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 140 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 189



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 94  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 139


>gi|344296065|ref|XP_003419730.1| PREDICTED: forkhead box protein I2-like [Loxodonta africana]
          Length = 582

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 418 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGTFRRKRKR 467



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA  ++LTLS IY ++  N+P+Y+    GWQ
Sbjct: 372 RPPYSYSALIAMAIQSAPLRRLTLSQIYQYVAGNFPFYKRCKAGWQ 417


>gi|326919631|ref|XP_003206083.1| PREDICTED: forkhead box protein I1c-like [Meleagris gallopavo]
          Length = 248

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 30  NSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 79


>gi|334313329|ref|XP_001379310.2| PREDICTED: forkhead box protein I3-like [Monodelphis domestica]
          Length = 405

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 210 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 259



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 3/62 (4%)

Query: 277 VNHMSLSISQDDSK---PPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKG 333
           +  +SL+  +D  K   PPYSY+ LI  A+ +A +++LTLS IY F+ +++P+Y+ +  G
Sbjct: 148 LGWLSLASQEDLLKIMRPPYSYSALIAMAIQNAPERKLTLSHIYQFVAESFPFYKRSKAG 207

Query: 334 WQ 335
           WQ
Sbjct: 208 WQ 209


>gi|363733664|ref|XP_426357.3| PREDICTED: forkhead box protein I1c [Gallus gallus]
          Length = 357

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 139 NSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 188



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY ++ +N+P+Y+ +  GWQ
Sbjct: 93  RPPYSYSALIAMAIQSAPERKLTLSHIYQYVAENFPFYKRSKAGWQ 138


>gi|351696510|gb|EHA99428.1| Forkhead box protein I3 [Heterocephalus glaber]
          Length = 282

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 58  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 107



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY ++  ++P+Y+ +  GWQ
Sbjct: 12  RPPYSYSALIAMAIQSAPERKLTLSHIYQYVADSFPFYQRSKAGWQ 57


>gi|213403452|ref|XP_002172498.1| fork head transcription factor 1 [Schizosaccharomyces japonicus
           yFS275]
 gi|212000545|gb|EEB06205.1| fork head transcription factor 1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 770

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 35/54 (64%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPC 156
           NSIRHNLSLN+ FI+VPR Q EPGKGSFW +DP    +      RR ++   P 
Sbjct: 354 NSIRHNLSLNKAFIRVPRQQNEPGKGSFWMLDPACIPQFEGTNVRRTKRATTPA 407



 Score = 47.4 bits (111), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 3/81 (3%)

Query: 25  PSKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNS-SRGDVDVNMGLSSFISRRHIEIF- 82
           P K   K   A AKL+   F + V+  ++TIGR + S    D+ +  +  ISR H +IF 
Sbjct: 11  PEKGSKKHVQAYAKLEFDNFSFFVQSLQVTIGRKAKSSSHCDLYIDDTKAISREHAKIFY 70

Query: 83  -FEHPNFFMTCNGKNGVFVDG 102
            F    F     GKNG FV+G
Sbjct: 71  NFSTRRFEFVILGKNGAFVNG 91


>gi|440892146|gb|ELR45473.1| Forkhead box protein I2, partial [Bos grunniens mutus]
          Length = 237

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ-RGVPCFRAPF 161
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+ RG     AP 
Sbjct: 68  NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRGEAGAVAPS 127

Query: 162 GLSSRCTLRFP 172
           G  S+   R P
Sbjct: 128 GPWSQAGARAP 138



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA  ++LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 22  RPPYSYSALIAMAIQSAPRRKLTLSQIYQYVAGNFPFYKRSKAGWQ 67


>gi|320593096|gb|EFX05505.1| forkhead transcription factor fkh1 [Grosmannia clavigera kw1407]
          Length = 738

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 134/323 (41%), Gaps = 61/323 (18%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSS-----------RGD---VDVNMGLSSFISRRHIE 80
           A AK+  +++ + V +  + IGR S             GD   V +++G S  +SR+H +
Sbjct: 106 AYAKIAAQDWTFYVTKLTVNIGRTSEPPPEYPKLYDPDGDPEFVHIDLGPSKMVSRQHAQ 165

Query: 81  IFF--EHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           I F  +   +F+   G+NG  V  N++   L  ++            G G    +  G E
Sbjct: 166 IVFNTKSEKWFVHVKGRNG--VKVNNMPWRLGQSKPL----------GSGDVIEVG-GVE 212

Query: 139 HKLIEQAFRRRRQRGVPCFRAPFGLSSRCTLR--FPSTNIRLQFQSLVNESDPAPTGQSV 196
              +           +P   +P  ++     R  FP +    +  S + E+   P  ++ 
Sbjct: 213 MMFV-----------LPLETSPLNINDIYLQRAGFPKSE---REPSHLEETPSRPRLRAT 258

Query: 197 SSSGVGVMGNPATSSLLPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNR 256
           +     V  +P  S++    R  +P          P P P          P +P    +R
Sbjct: 259 TPQA-AVESSPRGSTM----RSALP-------RGQPTPQPIAPAPPDYKRPGTPPSARSR 306

Query: 257 RNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSK---PPYSYAQLIVQAVASAHDKQLTL 313
            +V      +  +    T VV+   + +S D++K   P YSYAQ+I QA+ +  D +L L
Sbjct: 307 ISVPGSHLRSPQFRDIPTMVVHPSDVDLSLDENKNMKPQYSYAQMITQAIMNTSDGKLNL 366

Query: 314 SGIYSFITKNYPYYR-TADKGWQ 335
           +GIY+FI  NY YY+     GWQ
Sbjct: 367 NGIYNFIMDNYSYYKHQQAAGWQ 389



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 31/44 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN+ F KV RS EEPGKG  W I P  + +++  A+
Sbjct: 390 NSIRHNLSLNKAFEKVARSTEEPGKGMKWYILPEYKDEMVRTAY 433


>gi|56118526|ref|NP_001008143.1| forkhead box protein J1.2 [Xenopus (Silurana) tropicalis]
 gi|82181175|sp|Q66IG8.1|FXJ12_XENTR RecName: Full=Forkhead box protein J1.2; Short=FoxJ1.2
 gi|51704179|gb|AAH81355.1| forkhead box J1, gene 2 [Xenopus (Silurana) tropicalis]
          Length = 371

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 35/48 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F+KVPR ++EPGKG FW++DP      +    +RRR
Sbjct: 155 NSIRHNLSLNKCFMKVPRGKDEPGKGGFWQMDPRYADMFVNGVLKRRR 202



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++  ++LTLS IYS+IT+N+ YYR AD  WQ
Sbjct: 109 KPPYSYATLICMAMEASQQRKLTLSAIYSWITQNFCYYRHADPSWQ 154


>gi|344297526|ref|XP_003420448.1| PREDICTED: forkhead box protein I3-like [Loxodonta africana]
          Length = 460

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 230 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 279



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 3/65 (4%)

Query: 274 TNVVNHMSLSISQDDSK---PPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTA 330
           T  +  +S++  +D  K   PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +
Sbjct: 165 TGELGRLSMASREDLMKMVRPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRS 224

Query: 331 DKGWQ 335
             GWQ
Sbjct: 225 KAGWQ 229


>gi|402891533|ref|XP_003909000.1| PREDICTED: forkhead box protein I3 [Papio anubis]
          Length = 549

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 320 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 369



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 274 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 319


>gi|397468476|ref|XP_003805906.1| PREDICTED: forkhead box protein I3 [Pan paniscus]
          Length = 589

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 360 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 409



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 314 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 359


>gi|285157676|gb|ADC35033.1| fox/forkhead [Capitella teleta]
          Length = 320

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/55 (50%), Positives = 37/55 (67%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCF 157
           NSIRHNLSLN  F+KVPR + +PGKG++W +DP  E       +RRR++R  P  
Sbjct: 125 NSIRHNLSLNDCFVKVPREKGKPGKGNYWTLDPNCEDMFDHGNYRRRKRRAKPLL 179



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ SA  +++TL+GIY FI + +PYY    +GWQ
Sbjct: 79  KPPYSYIALIAMAIKSAPGRKITLNGIYQFIMERFPYYHDNKQGWQ 124


>gi|418205355|gb|AFX62231.1| forkhead box J1-like protein 4 [Schmidtea mediterranea]
          Length = 529

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 6/87 (6%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAP-- 160
           NS+RHNLSLN+ F KVPRS++E GKG FWRI+P    +L     + RRQ   P +  P  
Sbjct: 223 NSVRHNLSLNKCFEKVPRSKDERGKGGFWRINPKYADRLESNLIKYRRQ--FPLYNMPKI 280

Query: 161 -FGLSSRCTLRFPSTNIRLQF-QSLVN 185
             GL +  TL   +TN      QS VN
Sbjct: 281 TNGLPAASTLLSRTTNYSYMLCQSSVN 307



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 31/46 (67%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SYA LI  ++   +  ++TLS IY +IT N+ YYR +D  WQ
Sbjct: 177 KPPFSYATLICMSMRELNKSKITLSDIYGWITDNFIYYRLSDSSWQ 222


>gi|348588204|ref|XP_003479857.1| PREDICTED: forkhead box protein I2-like [Cavia porcellus]
          Length = 318

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR + +PGKG++W +DP  E       FRR+R+R
Sbjct: 149 NSIRHNLSLNDCFKKVPREESDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 198



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA  ++LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 103 RPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQ 148


>gi|449273581|gb|EMC83065.1| Forkhead box protein I1c, partial [Columba livia]
          Length = 257

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 39  NSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 88



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 28/38 (73%)

Query: 298 LIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           LI  A+ SA +++LTLS IY ++ +N+P+Y+ +  GWQ
Sbjct: 1   LIAMAIQSAPERKLTLSHIYQYVAENFPFYKRSKAGWQ 38


>gi|195384363|ref|XP_002050887.1| GJ22399 [Drosophila virilis]
 gi|194145684|gb|EDW62080.1| GJ22399 [Drosophila virilis]
          Length = 471

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 131 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 180



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 85  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 130


>gi|57337372|emb|CAH69694.1| forkhead transcription factor [Branchiostoma floridae]
          Length = 497

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR  ++PGKGS+W +DP S +     ++ RRR+R
Sbjct: 94  NSIRHNLSLNECFIKVPRDDKKPGKGSYWSLDPDSYNMFDNGSYLRRRRR 143



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 36/51 (70%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S+D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +PYYR   +GWQ
Sbjct: 43  SKDMVKPPYSYIALIAMAIQNAPDKKVTLNGIYQFIMDRFPYYRENKQGWQ 93


>gi|391335010|ref|XP_003741890.1| PREDICTED: uncharacterized protein LOC100902875 [Metaseiulus
           occidentalis]
          Length = 437

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 45/77 (58%)

Query: 259 VSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYS 318
            S+D + ++H A  H N V   S    +D  KPPYSY  LI  A+ +  +K+ TLSGIY 
Sbjct: 12  ASSDDYRSSHLALTHQNSVLQSSHIAHKDMVKPPYSYIALIAMAIQNTPEKKQTLSGIYD 71

Query: 319 FITKNYPYYRTADKGWQ 335
           FI   +P+YR   +GWQ
Sbjct: 72  FIMIKFPFYRHNKQGWQ 88



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+K+PR +++PGKGS+W + P S +     ++ RRR+R
Sbjct: 89  NSIRHNLSLNECFVKIPRDEKKPGKGSYWTLHPESLNMFENGSYLRRRRR 138


>gi|340377303|ref|XP_003387169.1| PREDICTED: hypothetical protein LOC100635109 [Amphimedon
           queenslandica]
          Length = 473

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 36/46 (78%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LIV A+ S+ +++LTLSGIY +I KN+PYYR   +GWQ
Sbjct: 109 KPPFSYNALIVMAIRSSPERKLTLSGIYDYIMKNFPYYRENKQGWQ 154



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 1/53 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKL-IEQAFRRRRQRGV 154
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+  + I     + R+R V
Sbjct: 155 NSIRHNLSLNKCFVKVPRPYDDPGKGNYWTLDPSSDDIMFIGGTTGKLRRRPV 207


>gi|148231700|ref|NP_001089890.1| forkhead box protein J1.2 [Xenopus laevis]
 gi|115502203|sp|Q32NH9.1|FXJ12_XENLA RecName: Full=Forkhead box protein J1.2; Short=FoxJ1.2
 gi|80476512|gb|AAI08617.1| MGC131191 protein [Xenopus laevis]
          Length = 370

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 35/48 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRR 150
           NSIRHNLSLN+ F+KVPR ++EPGKG FW++DP      +    +RRR
Sbjct: 154 NSIRHNLSLNKCFMKVPRGKDEPGKGGFWQMDPRYADMFVNGVLKRRR 201



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++  ++LTLS IY++IT+N+ YYR AD  WQ
Sbjct: 108 KPPYSYATLICMAMEASQQRKLTLSAIYNWITQNFCYYRHADPSWQ 153


>gi|327275375|ref|XP_003222449.1| PREDICTED: forkhead box protein I1c-like [Anolis carolinensis]
          Length = 396

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 184 NSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 233



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY ++ +N+P+Y+ +  GWQ
Sbjct: 138 RPPYSYSALIAMAIQSAPERKLTLSHIYQYVAENFPFYKRSKAGWQ 183


>gi|284005018|ref|NP_001164677.1| fork-head box D transcription factor [Saccoglossus kowalevskii]
 gi|283464169|gb|ADB22668.1| fork-head box D transcription factor [Saccoglossus kowalevskii]
          Length = 388

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+K+PR    PGKG++W +DP SE      +F RRR+R
Sbjct: 182 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPASEDMFDNGSFLRRRKR 231



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  AV  +  K+LTLSGI  FI   +PYYR     WQ
Sbjct: 136 KPPYSYIALITMAVLQSPQKRLTLSGICEFIMNRFPYYRERFPVWQ 181


>gi|403303979|ref|XP_003942591.1| PREDICTED: forkhead box protein I3 [Saimiri boliviensis
           boliviensis]
          Length = 544

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 316 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 365



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 31/43 (72%)

Query: 293 YSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +SY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 273 HSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 315


>gi|351709669|gb|EHB12588.1| Forkhead box protein I2 [Heterocephalus glaber]
          Length = 328

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR + +PGKG++W +DP  E       FRR+R+R
Sbjct: 164 NSIRHNLSLNDCFKKVPRDENDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 213



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA  ++LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 118 RPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQ 163


>gi|332018620|gb|EGI59201.1| Fork head domain transcription factor slp2 [Acromyrmex echinatior]
          Length = 421

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP SE   I  A  + R+R
Sbjct: 152 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGATGKLRRR 201



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 11/63 (17%)

Query: 284 ISQDDSK-----------PPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADK 332
           ISQ DSK           PPYSY  LI+ A+  + +K+LTL+GIY +I +++PYY    +
Sbjct: 89  ISQKDSKEQAEDKKKAEKPPYSYNALIMMAIRQSPEKRLTLNGIYEYIMRHFPYYENNKQ 148

Query: 333 GWQ 335
           GWQ
Sbjct: 149 GWQ 151


>gi|194757100|ref|XP_001960803.1| GF13549 [Drosophila ananassae]
 gi|190622101|gb|EDV37625.1| GF13549 [Drosophila ananassae]
          Length = 456

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 124 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 173



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 78  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 123


>gi|19527655|gb|AAL89942.1| SD02951p [Drosophila melanogaster]
          Length = 456

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 131 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 180



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 85  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 130


>gi|195170280|ref|XP_002025941.1| GL10130 [Drosophila persimilis]
 gi|194110805|gb|EDW32848.1| GL10130 [Drosophila persimilis]
          Length = 457

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 119 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 168



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 73  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 118


>gi|326430664|gb|EGD76234.1| hypothetical protein PTSG_00936 [Salpingoeca sp. ATCC 50818]
          Length = 474

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 40/52 (76%), Gaps = 2/52 (3%)

Query: 286 QDDSKPPYSYAQLIVQAVASAH--DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++D KPPYSYA LI  A+ S    +K++TL+ IY +I +NYPY+RTADKGW+
Sbjct: 99  REDGKPPYSYATLITFALNSVKTGEKKMTLADIYEWIQENYPYFRTADKGWK 150



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/32 (59%), Positives = 24/32 (75%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NS+RHNLSLN+ F KVPR   + GKG +W I+
Sbjct: 151 NSVRHNLSLNKMFKKVPRDPADHGKGCYWAIN 182


>gi|17647421|ref|NP_523814.1| forkhead domain 59A [Drosophila melanogaster]
 gi|13124730|sp|Q02361.2|FD3_DROME RecName: Full=Fork head domain-containing protein FD3
 gi|7291491|gb|AAF46917.1| forkhead domain 59A [Drosophila melanogaster]
 gi|94400450|gb|ABF17889.1| FI01123p [Drosophila melanogaster]
 gi|220952246|gb|ACL88666.1| fd59A-PA [synthetic construct]
 gi|220960482|gb|ACL92777.1| fd59A-PA [synthetic construct]
          Length = 456

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 131 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 180



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 85  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 130


>gi|125811493|ref|XP_001361889.1| GA17601 [Drosophila pseudoobscura pseudoobscura]
 gi|54637065|gb|EAL26468.1| GA17601 [Drosophila pseudoobscura pseudoobscura]
          Length = 457

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 119 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 168



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 73  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 118


>gi|405976425|gb|EKC40931.1| Fork head domain transcription factor slp2 [Crassostrea gigas]
          Length = 403

 Score = 65.5 bits (158), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 38/51 (74%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S+   KPP+SY  LI+ A+ S+ +K+LTL+GIY FI KN+PYY+   +GWQ
Sbjct: 114 SKKSEKPPFSYNALIMMAIRSSAEKRLTLNGIYEFIMKNFPYYKDNKQGWQ 164



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 37/57 (64%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA 159
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP  +   I     + R+R     R+
Sbjct: 165 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSCDDVFIGGTTGKLRRRSTTASRS 221


>gi|195028702|ref|XP_001987215.1| GH21797 [Drosophila grimshawi]
 gi|193903215|gb|EDW02082.1| GH21797 [Drosophila grimshawi]
          Length = 456

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 125 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 174



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 79  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 124


>gi|195147968|ref|XP_002014946.1| GL18683 [Drosophila persimilis]
 gi|194106899|gb|EDW28942.1| GL18683 [Drosophila persimilis]
          Length = 469

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 242 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 301

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FPS     QF   +     AP+
Sbjct: 302 AFKRSLIGPMFPSLAAYPQFGQFLTYPPSAPS 333



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 194 NEKPPYSYNALIMMAIRQSQEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 241


>gi|47207683|emb|CAF90239.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 176

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F K+PR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 123 NSIRHNLSLNDCFKKIPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 172



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 6/91 (6%)

Query: 251 RGLHNRRNVSADL-HMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQ-----LIVQAVA 304
           +GL  + N + +   MAA Y     +V +  SL  +Q        YA      L +    
Sbjct: 32  QGLLEKENGAQEAPDMAAVYCDNFGSVYHQQSLPGAQRGGYGLGDYASSPNPYLWLNGPG 91

Query: 305 SAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +AH+K+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 92  NAHEKKLTLSQIYQYVADNFPFYKKSKAGWQ 122


>gi|198474400|ref|XP_001356669.2| GA15533 [Drosophila pseudoobscura pseudoobscura]
 gi|198138375|gb|EAL33734.2| GA15533 [Drosophila pseudoobscura pseudoobscura]
          Length = 471

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 244 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 303

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FPS     QF   +     AP+
Sbjct: 304 AFKRSLIGPMFPSLAAYPQFGQFLTYPPSAPS 335



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 196 NEKPPYSYNALIMMAIRQSQEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 243


>gi|195346889|ref|XP_002039987.1| GM15965 [Drosophila sechellia]
 gi|194135336|gb|EDW56852.1| GM15965 [Drosophila sechellia]
          Length = 456

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 131 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 180



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 85  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 130


>gi|195585847|ref|XP_002082690.1| GD11717 [Drosophila simulans]
 gi|194194699|gb|EDX08275.1| GD11717 [Drosophila simulans]
          Length = 456

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 131 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 180



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 85  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 130


>gi|172087324|ref|XP_001913204.1| forkhead box protein C1 [Oikopleura dioica]
 gi|48994312|gb|AAT47886.1| forkhead box protein C1 [Oikopleura dioica]
          Length = 307

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)

Query: 278 NHMSLSISQDDS-KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           N MS   S+++  KPPYSY  LI  A+ S  D+++TLSGIY FI+  +PYYR   +GWQ
Sbjct: 61  NKMSAKTSKNEMVKPPYSYIALISMAINSKKDRRITLSGIYKFISDKFPYYRDTKQGWQ 119



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIK  R  ++ GKGSFW +DP + +     ++ RRR+R
Sbjct: 120 NSIRHNLSLNECFIKEARIDKKRGKGSFWTLDPDAFNMFENGSYLRRRRR 169


>gi|195488924|ref|XP_002092519.1| GE14241 [Drosophila yakuba]
 gi|194178620|gb|EDW92231.1| GE14241 [Drosophila yakuba]
          Length = 454

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 131 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 180



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 85  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 130


>gi|196010768|ref|XP_002115248.1| hypothetical protein TRIADDRAFT_29433 [Trichoplax adhaerens]
 gi|190582019|gb|EDV22093.1| hypothetical protein TRIADDRAFT_29433 [Trichoplax adhaerens]
          Length = 158

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 36/47 (76%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            KPPYSY  LI+ A+ ++ +K+LTL+GIY FI KN+P+YR   +GWQ
Sbjct: 59  EKPPYSYNALIMMAIRNSSEKRLTLNGIYEFIMKNFPFYRENKQGWQ 105



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ FIKVPRS ++PGKG++W +DP SE   I     + R+R
Sbjct: 106 NSIRHNLSLNKCFIKVPRSYDDPGKGNYWMLDPSSEDMYIGGTSGKLRRR 155


>gi|345792583|ref|XP_854369.2| PREDICTED: forkhead box protein I2 [Canis lupus familiaris]
          Length = 320

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R++
Sbjct: 163 NSIRHNLSLNDCFKKVPREEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKK 212



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 31/46 (67%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI   + SA  ++LTL  IY ++  N+P+Y+ +  GWQ
Sbjct: 117 RPPYSYSALIAMPIQSAPRRRLTLCQIYQYVAGNFPFYKRSKAGWQ 162


>gi|410955310|ref|XP_003984299.1| PREDICTED: forkhead box protein I3 [Felis catus]
          Length = 525

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 297 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 346



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 30/42 (71%)

Query: 294 SYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 255 SYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 296


>gi|313231739|emb|CBY08852.1| unnamed protein product [Oikopleura dioica]
          Length = 334

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F K+PR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 73  NSIRHNLSLNDCFKKMPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 122



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +A +K+LTL+ IY ++ +N+P+Y+ +  GWQ
Sbjct: 27  RPPYSYSALIAMAIQNAPEKRLTLAQIYQYVAENFPFYKKSRAGWQ 72


>gi|440491342|gb|ELQ74000.1| Transcription factor of the Forkhead/HNF3 family
           [Trachipleistophora hominis]
          Length = 221

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 48/94 (51%)

Query: 242 AANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQ 301
             N+   +P  + NR N  ++            N  N   L  S   +KP YSY+QLI Q
Sbjct: 34  TGNTYKYTPMDVLNRNNDDSEKMYVDPRIILDENDSNSAPLWYSNACNKPAYSYSQLITQ 93

Query: 302 AVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           A+ S  DK+LTLS IY+FI   Y YYR AD  WQ
Sbjct: 94  ALESNADKKLTLSQIYAFIKDKYAYYRHADPVWQ 127



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/41 (58%), Positives = 29/41 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIE 143
           NSIRHNLSLN+ F KV R Q  PGKG FW +D  S+ ++ E
Sbjct: 128 NSIRHNLSLNKNFKKVQRPQNMPGKGGFWILDKTSDSEIDE 168


>gi|322790892|gb|EFZ15558.1| hypothetical protein SINV_02679 [Solenopsis invicta]
          Length = 437

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP SE   I  A  + R+R
Sbjct: 165 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGATGKLRRR 214



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI+ A+  + +K+LTL+GIY +I +++PYY    +GWQ
Sbjct: 119 KPPYSYNALIMMAIRQSPEKRLTLNGIYEYIMRHFPYYENNKQGWQ 164


>gi|256052360|ref|XP_002569740.1| forkhead protein/ forkhead protein domain [Schistosoma mansoni]
 gi|360043898|emb|CCD81444.1| putative forkhead protein/ forkhead protein domain [Schistosoma
           mansoni]
          Length = 744

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 36/60 (60%)

Query: 276 VVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
             N    S+     KPPYSY  LI  A++S +D + TL+GIY +I  NYPYYR   +GWQ
Sbjct: 304 TTNQSEESVQDSSVKPPYSYIALIAMAISSQYDGKATLNGIYRYIMDNYPYYRENKQGWQ 363



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 5/69 (7%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F+KVPR   +PGKGSFW + P + +     ++ RR++R    F+    
Sbjct: 364 NSIRHNLSLNDCFVKVPRDDTKPGKGSFWTLHPEAHNMFDNGSYLRRKRR----FKTDLT 419

Query: 163 LSSR-CTLR 170
            + R C+++
Sbjct: 420 STERYCSMK 428


>gi|300796545|ref|NP_001180001.1| forkhead box protein C2 [Bos taurus]
          Length = 502

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
           TSP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  TSPMGVYSGHPEQYGAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|296478046|tpg|DAA20161.1| TPA: forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Bos taurus]
          Length = 502

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
           TSP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  TSPMGVYSGHPEQYGAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|431906536|gb|ELK10658.1| Forkhead box protein I3 [Pteropus alecto]
          Length = 288

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PG+G++W +DP  E       FRR+R+R
Sbjct: 58  NSIRHNLSLNDCFKKVPRDEDDPGEGNYWTLDPNCEKMFDNGNFRRKRKR 107



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA +++LTLS IY F+  ++P+Y+ +  GWQ
Sbjct: 12  RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQ 57


>gi|295656524|gb|ADG26725.1| forkhead box protein G1 [Platynereis dumerilii]
          Length = 328

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 36/46 (78%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+ S+ +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 118 KPPFSYNALIMMAIRSSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 163



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA 159
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R     R+
Sbjct: 164 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRS 220


>gi|194884645|ref|XP_001976310.1| GG22808 [Drosophila erecta]
 gi|190659497|gb|EDV56710.1| GG22808 [Drosophila erecta]
          Length = 454

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 131 NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 180



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 85  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 130


>gi|195118596|ref|XP_002003822.1| GI18115 [Drosophila mojavensis]
 gi|193914397|gb|EDW13264.1| GI18115 [Drosophila mojavensis]
          Length = 488

 Score = 65.1 bits (157), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 240 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 299

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FP      QF   +     AP+
Sbjct: 300 AFKRSLIGPMFPGLAAYPQFGQFLTYPQAAPS 331



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 192 NEKPPYSYNALIMMAIRQSQEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 239


>gi|324520915|gb|ADY47743.1| Fork head domain transcription factor slp2 [Ascaris suum]
          Length = 276

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 38/51 (74%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S +  KPP+SY  LI+ A+ ++ +++LTLSGIY +I KNYP+YR   +GWQ
Sbjct: 53  SDESGKPPFSYNALIMMAIRNSKERRLTLSGIYEYIMKNYPFYRDNKQGWQ 103



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 32/40 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI 142
           NSIRHNLSLN+ F+KVPRS ++PGKG++W +D   E ++ 
Sbjct: 104 NSIRHNLSLNKCFVKVPRSYDDPGKGNYWMLDASCEDEVF 143


>gi|19113556|ref|NP_596764.1| fork head transcription factor Fkh2 [Schizosaccharomyces pombe
           972h-]
 gi|74676042|sp|O60129.1|FKH2_SCHPO RecName: Full=Fork head protein homolog 2
 gi|3133109|emb|CAA19034.1| fork head transcription factor Fkh2 [Schizosaccharomyces pombe]
          Length = 642

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 37/49 (75%)

Query: 287 DDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D+ KPPYSY+ +I QA+ S+ +  +TLS IYS+I+ +YPYYRT   GWQ
Sbjct: 220 DNKKPPYSYSVMIAQAILSSSECMMTLSNIYSWISTHYPYYRTTKSGWQ 268



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 30/50 (60%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F KVPR   E GKG  W I P    + I +  +  R+R
Sbjct: 269 NSIRHNLSLNKAFRKVPRKSGEQGKGMKWSIVPEFREEFIAKTRKTPRKR 318



 Score = 45.1 bits (105), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 12/80 (15%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRN----SSRGD------VDVNMGLSSFISRRHIEIFFE 84
           A AK  G  + Y V++ RI +GR     S +G       +D+N G S  +SR+H  + ++
Sbjct: 78  AYAKFAGSTWTYYVKKIRIILGREPANPSPKGKNEDLEVIDMNFGPSKVVSRKHAVVEYD 137

Query: 85  HPNFFMTCN--GKNGVFVDG 102
             +    C+  G+NG+ VDG
Sbjct: 138 LDDQTWNCSVYGRNGIKVDG 157


>gi|268532048|ref|XP_002631152.1| C. briggsae CBR-UNC-130 protein [Caenorhabditis briggsae]
          Length = 332

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KVPR    PGKG++W +DP SE      +F RRR+R
Sbjct: 178 NSIRHNLSLNDCFVKVPRGPGNPGKGNYWTLDPNSEDMFDNGSFLRRRKR 227



 Score = 45.1 bits (105), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 29/47 (61%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SKPP+SY  LI  ++ ++ +K+LTLS I  +I   + YY+     WQ
Sbjct: 131 SKPPFSYIALISMSIINSPEKKLTLSEICDYIMNRFEYYKEKFPAWQ 177


>gi|239607351|gb|EEQ84338.1| forkhead box protein C2 [Ajellomyces dermatitidis ER-3]
          Length = 721

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 37/51 (72%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S  D KPPYSYA LI QA+ S  +++LTLS IY++IT+NY +YR    GWQ
Sbjct: 352 SAKDLKPPYSYATLISQAIFSTEEEKLTLSKIYAYITENYAFYRHTKSGWQ 402



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPC 156
           NSIRHNLSLN+ F KVPR  +EPGKG  W+I P    +   +  R+  Q   P 
Sbjct: 403 NSIRHNLSLNKAFQKVPRRTDEPGKGMKWQIVPEFRQEYFNKQNRKSNQSSAPS 456



 Score = 40.8 bits (94), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 21/97 (21%)

Query: 31  KSGTAIAKLQGREFEYMVRQKRITIGRNSSRG------------------DVDVNMGLSS 72
           +S  A AK+ GR++ Y ++   I IGR   R                   +V +++G S 
Sbjct: 108 ESVKAYAKIAGRDWTYYMQGVHINIGRPPDRDQRVDAQSSPVAVAAQAMPEVHIDLGPSK 167

Query: 73  FISRRHIEIFFEHPN---FFMTCNGKNGVFVDGNSIR 106
           F+SR H EI +   +   + +  NG+NG+ ++   I+
Sbjct: 168 FVSRLHAEILYRSQDPIGWHIRVNGRNGIRLNTQIIK 204


>gi|195401327|ref|XP_002059265.1| GJ16301 [Drosophila virilis]
 gi|194156139|gb|EDW71323.1| GJ16301 [Drosophila virilis]
          Length = 466

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 245 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 304

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FP      QF   +     AP+
Sbjct: 305 AFKRSLIGPMFPGLAAYPQFGQFLTYPQAAPS 336



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 195 KGNEKPPYSYNALIMMAIRQSQEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 244


>gi|261200607|ref|XP_002626704.1| forkhead box protein C2 [Ajellomyces dermatitidis SLH14081]
 gi|239593776|gb|EEQ76357.1| forkhead box protein C2 [Ajellomyces dermatitidis SLH14081]
          Length = 721

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 37/51 (72%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S  D KPPYSYA LI QA+ S  +++LTLS IY++IT+NY +YR    GWQ
Sbjct: 352 SAKDLKPPYSYATLISQAIFSTEEEKLTLSKIYAYITENYAFYRHTKSGWQ 402



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPC 156
           NSIRHNLSLN+ F KVPR  +EPGKG  W+I P    +   +  R+  Q   P 
Sbjct: 403 NSIRHNLSLNKAFQKVPRRTDEPGKGMKWQIVPEFRQEYFNKQNRKSNQSSAPS 456



 Score = 40.8 bits (94), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 21/97 (21%)

Query: 31  KSGTAIAKLQGREFEYMVRQKRITIGRNSSRG------------------DVDVNMGLSS 72
           +S  A AK+ GR++ Y ++   I IGR   R                   +V +++G S 
Sbjct: 108 ESVKAYAKIAGRDWTYYMQGVHINIGRPPDRDQRVDAQSSPVAVAAQAMPEVHIDLGPSK 167

Query: 73  FISRRHIEIFFEHPN---FFMTCNGKNGVFVDGNSIR 106
           F+SR H EI +   +   + +  NG+NG+ ++   I+
Sbjct: 168 FVSRLHAEILYRSQDPIGWHIRVNGRNGIRLNTQIIK 204


>gi|327357321|gb|EGE86178.1| forkhead box protein C2 [Ajellomyces dermatitidis ATCC 18188]
          Length = 745

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 37/51 (72%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S  D KPPYSYA LI QA+ S  +++LTLS IY++IT+NY +YR    GWQ
Sbjct: 352 SAKDLKPPYSYATLISQAIFSTEEEKLTLSKIYAYITENYAFYRHTKSGWQ 402



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 32/54 (59%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPC 156
           NSIRHNLSLN+ F KVPR  +EPGKG  W+I P    +   +  R+  Q   P 
Sbjct: 403 NSIRHNLSLNKAFQKVPRRTDEPGKGMKWQIVPEFRQEYFNKQNRKSNQSSAPS 456



 Score = 40.8 bits (94), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 21/97 (21%)

Query: 31  KSGTAIAKLQGREFEYMVRQKRITIGRNSSRG------------------DVDVNMGLSS 72
           +S  A AK+ GR++ Y ++   I IGR   R                   +V +++G S 
Sbjct: 108 ESVKAYAKIAGRDWTYYMQGVHINIGRPPDRDQRVDAQSSPVAVAAQAMPEVHIDLGPSK 167

Query: 73  FISRRHIEIFFEHPN---FFMTCNGKNGVFVDGNSIR 106
           F+SR H EI +   +   + +  NG+NG+ ++   I+
Sbjct: 168 FVSRLHAEILYRSQDPIGWHIRVNGRNGIRLNTQIIK 204


>gi|327267662|ref|XP_003218618.1| PREDICTED: forkhead box protein I2-like [Anolis carolinensis]
          Length = 267

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R++
Sbjct: 62  NSIRHNLSLNDCFKKVPRHEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKK 111



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ SA  K+LTLS IY F+  N+P+Y+ +  GWQ
Sbjct: 16  RPPYSYSALIAMALQSAPGKKLTLSQIYQFVAGNFPFYKRSKAGWQ 61


>gi|367028026|ref|XP_003663297.1| hypothetical protein MYCTH_2305050 [Myceliophthora thermophila ATCC
           42464]
 gi|347010566|gb|AEO58052.1| hypothetical protein MYCTH_2305050 [Myceliophthora thermophila ATCC
           42464]
          Length = 793

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 38/47 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN+ F+K  R +++PGKGS+W I+PG+EH ++++   R+
Sbjct: 253 NSIRHNLSLNKSFVKQERPKDDPGKGSYWSIEPGTEHTVLKEKPSRK 299



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           I  D +KP +SYA LI  A+  +  ++LTLS IY +I+  + YYR  + GWQ
Sbjct: 201 IIDDGTKPNHSYATLIAMAIIRSPQRRLTLSQIYKWISDTFSYYRGDNTGWQ 252


>gi|319740954|gb|ADV68997.1| forkhead box d [Patiria miniata]
          Length = 247

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIK+PR    PGKG++W +DP SE      +F RRR+R
Sbjct: 173 NSIRHNLSLNDCFIKIPREPGNPGKGNYWTLDPASEDMFDNGSFLRRRKR 222



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYYR     WQ
Sbjct: 127 KPPYSYIALITMAILQSPQKRLTLSGICEFIMNRFPYYREKFPIWQ 172


>gi|443706725|gb|ELU02639.1| hypothetical protein CAPTEDRAFT_49410, partial [Capitella teleta]
          Length = 103

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/53 (52%), Positives = 37/53 (69%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVP 155
           NSIRHNLSLN  F+KVPR + +PGKG++W +DP  E       +RRR++R  P
Sbjct: 51  NSIRHNLSLNDCFVKVPREKGKPGKGNYWTLDPNCEDMFDHGNYRRRKRRAKP 103



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ SA  +++TL+GIY FI + +PYY    +GWQ
Sbjct: 5   KPPYSYIALIAMAIKSAPGRKITLNGIYQFIMERFPYYHDNKQGWQ 50


>gi|391348111|ref|XP_003748295.1| PREDICTED: uncharacterized protein LOC100909139 [Metaseiulus
           occidentalis]
          Length = 324

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 40/64 (62%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ FIKVPR  ++PGKG++W +DP ++   I     + R+R  P  R    
Sbjct: 153 NSIRHNLSLNKCFIKVPRHYDDPGKGNYWMLDPSADDVFIGGTTGKLRRRTAPATRNRLA 212

Query: 163 LSSR 166
           L  R
Sbjct: 213 LLRR 216



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY +I KN+PYYR   +GWQ
Sbjct: 107 KPPFSYNALIMMAIRQSSEKRLTLNGIYEYIMKNFPYYRENKQGWQ 152


>gi|449687443|ref|XP_002156863.2| PREDICTED: forkhead box protein J3-like [Hydra magnipapillata]
          Length = 593

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 3/50 (6%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLNR F KVPR++E+PGKGS+W IDP  +    E+ +  R+QR
Sbjct: 130 NSIRHNLSLNRCFQKVPRTKEDPGKGSYWAIDPNPQ---PEEFYNGRQQR 176



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 37/53 (69%)

Query: 283 SISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SIS   SKPPYSYA +I  A+ S+   ++TL+ IY +I++++PYY  +  GW+
Sbjct: 77  SISYGKSKPPYSYANIITFAINSSEKGKMTLAEIYQWISESFPYYNESSSGWK 129


>gi|221131213|ref|XP_002167983.1| PREDICTED: uncharacterized protein LOC100202271 [Hydra
           magnipapillata]
          Length = 467

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 24/119 (20%)

Query: 241 SAANSCPTSPRGLHNRRNVSADLHMAAHY--AAAHTNVVN-------------------- 278
           +++ +CPT     +N +   AD + +  Y  A+ +TN+ +                    
Sbjct: 16  TSSTTCPTPYYTYNNDQQAYADYYRSGAYRTASQYTNLSSPYYPNPYTDGHYHHHYYSTY 75

Query: 279 -HMSLSISQDD-SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
             +S+   Q +  KPPYSY  LI  A+ S+ DK+LTLSGIY FI + +PYYR   +GWQ
Sbjct: 76  PMLSMQNQQKELVKPPYSYIALISMAIQSSPDKKLTLSGIYQFIMERFPYYRQNKQGWQ 134



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 27/35 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR   +PGKGS+W + P S
Sbjct: 135 NSIRHNLSLNECFLKVPRDDNKPGKGSYWSLHPDS 169


>gi|62203301|gb|AAH92710.1| Forkhead box G1 [Danio rerio]
          Length = 420

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 1/111 (0%)

Query: 225 HTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSI 284
           H E   +P P+      + N+C  S    H+  + + +         A            
Sbjct: 49  HEEEEKTPLPAQVQEQKSENTCAKSDNSSHDS-SCTDEKEKQEEKRDAKEGEGGKEGDKK 107

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +    KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 108 NGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 158



 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 159 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 208


>gi|410254042|gb|JAA14988.1| forkhead box C1 [Pan troglodytes]
          Length = 547

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  DKKITLNGIYQFIMDRFPFYRDNKQGWQ 117



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 161


>gi|169765291|ref|XP_001817117.1| forkhead box protein L2 [Aspergillus oryzae RIB40]
 gi|83764971|dbj|BAE55115.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 722

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI-EQAFRRRRQRGVPCFRAP 160
           NSIRHNLSLN+ FIK  R +++PGKG++W I+PG E + + ++ FRR     +P   AP
Sbjct: 251 NSIRHNLSLNKAFIKQERPKDDPGKGNYWAIEPGMEAQFLKDKPFRRATMSSIPLPAAP 309



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 36/57 (63%)

Query: 279 HMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           H    I  D  KPPYSYA LI  ++  A +++LTL+ IY +I+  + YY+ +D GWQ
Sbjct: 194 HEMPPIEDDGVKPPYSYATLIGMSILRAPNRRLTLAQIYRWISDTFSYYKNSDPGWQ 250


>gi|388594876|gb|AFK74873.1| transcription factor FoxA2 [Hydra vulgaris]
          Length = 467

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 24/119 (20%)

Query: 241 SAANSCPTSPRGLHNRRNVSADLHMAAHY--AAAHTNVVN-------------------- 278
           +++ +CPT     +N +   AD + +  Y  A+ +TN+ +                    
Sbjct: 16  TSSTTCPTPYYTYNNDQQAYADYYRSGAYRTASQYTNLSSPYYPNPYTDGHYHHHYYSTY 75

Query: 279 -HMSLSISQDD-SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
             +S+   Q +  KPPYSY  LI  A+ S+ DK+LTLSGIY FI + +PYYR   +GWQ
Sbjct: 76  PMLSMQNQQKELVKPPYSYIALISMAIQSSPDKKLTLSGIYQFIMERFPYYRQNKQGWQ 134



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 27/35 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR   +PGKGS+W + P S
Sbjct: 135 NSIRHNLSLNECFLKVPRDDNKPGKGSYWSLHPDS 169


>gi|440908795|gb|ELR58780.1| Forkhead box protein C2, partial [Bos grunniens mutus]
          Length = 338

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
           TSP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 36  TSPMGVYSGHPEQYGAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 90

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 91  EKKITLNGIYQFIMDRFPFYRENKQGWQ 118



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 119 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 153


>gi|340959310|gb|EGS20491.1| putative forkhead transcription factor [Chaetomium thermophilum
           var. thermophilum DSM 1495]
          Length = 982

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 38/47 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN++FIK  R +++PGKG++W I+PG+EH  +++   R+
Sbjct: 359 NSIRHNLSLNKHFIKQERPKDDPGKGNYWSIEPGAEHMFMKEKPARK 405



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           I  D +KP +SYA LI  A+  +  ++LTLS IY +I+  + YY T+D GWQ
Sbjct: 307 IIDDGTKPNHSYATLIGMAILRSPQRRLTLSQIYKWISDTFSYYSTSDTGWQ 358


>gi|126304727|ref|XP_001365891.1| PREDICTED: forkhead box protein C2-like [Monodelphis domestica]
          Length = 506

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 16/98 (16%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF-------------RRR 149
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F             + +
Sbjct: 119 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKEK 178

Query: 150 RQRG---VPCFRAPFGLSSRCTLRFPSTNIRLQFQSLV 184
            +RG    P  +AP G S+      PST+   + +  V
Sbjct: 179 EERGHLKEPPPQAPKGASAHAGAPLPSTDTPKEVEKKV 216



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 38/58 (65%)

Query: 278 NHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +H   +  +D  KPPYSY  LI  A+ +A +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 61  HHHQPTAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQ 118


>gi|238054021|ref|NP_001153931.1| forkhead box G2 [Oryzias latipes]
 gi|226441730|gb|ACO57467.1| forkhead box G2 [Oryzias latipes]
          Length = 387

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 14/119 (11%)

Query: 48  VRQKRITIGRNSSRGDVD-VNMGLSSFISRRHIEIFF-EHPNFFMTCNGKNGVFVDG--- 102
           V+Q+R+ +G   SRG  + V      F     I +   + P   +T NG     ++    
Sbjct: 71  VKQERVKVGSEKSRGSEESVKPEKPPFSYNALIMMAIRQSPGRRLTLNGIYEFIMENFPY 130

Query: 103 ---------NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
                    NSIRHNLSLN+ FIKVPR  ++PGKG++W +DP SE   I     + R+R
Sbjct: 131 YRDNRQGWQNSIRHNLSLNKCFIKVPRHYDDPGKGNYWMLDPCSEDVFIGSTSGKLRRR 189



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  +  ++LTL+GIY FI +N+PYYR   +GWQ
Sbjct: 94  KPPFSYNALIMMAIRQSPGRRLTLNGIYEFIMENFPYYRDNRQGWQ 139


>gi|125859033|gb|AAI29658.1| LOC100037201 protein [Xenopus laevis]
          Length = 317

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 115 KPPFSYNALIMMAIRQSAEKRLTLNGIYEFIMKNFPYYRENKQGWQ 160



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 9/69 (13%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R          
Sbjct: 161 NSIRHNLSLNKCFLKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRST-------- 212

Query: 163 LSSRCTLRF 171
            SSR  L F
Sbjct: 213 -SSRAKLAF 220


>gi|328709854|ref|XP_003244090.1| PREDICTED: hypothetical protein LOC100167072 [Acyrthosiphon pisum]
          Length = 561

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIK+PR    PGKG++W +DP +E      +F RRR+R
Sbjct: 248 NSIRHNLSLNDCFIKIPREPGNPGKGNYWTLDPMAEDMFDNGSFLRRRKR 297



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYYR     WQ
Sbjct: 202 KPPYSYIALITMAILQSPHKKLTLSGICEFIMSRFPYYRDKFPAWQ 247


>gi|432119589|gb|ELK38545.1| Forkhead box protein C1 [Myotis davidii]
          Length = 290

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 15  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 64



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 65  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 108


>gi|355693196|gb|EHH27799.1| hypothetical protein EGK_18084, partial [Macaca mulatta]
          Length = 317

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I    R+ R+R
Sbjct: 55  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTRKLRRR 104



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 9   KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 54


>gi|363735423|ref|XP_003641555.1| PREDICTED: forkhead box protein I1-ema-like [Gallus gallus]
          Length = 174

 Score = 64.3 bits (155), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E       FRR+R+R
Sbjct: 99  NSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 148



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 34/47 (72%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++PPYSY+ LI  A+ SA  ++ TLS IY ++ +N+P+Y+ +  GWQ
Sbjct: 52  ARPPYSYSALIAMAIHSAPGRRRTLSQIYQYVAENFPFYKKSKAGWQ 98


>gi|341874528|gb|EGT30463.1| hypothetical protein CAEBREN_06289 [Caenorhabditis brenneri]
          Length = 277

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 37/48 (77%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPP+SY  LI+ A+ ++ +K+LTLSGIY +IT NYP+YR   +GWQ
Sbjct: 98  NDKPPFSYNALIMMAIKNSPEKRLTLSGIYDYITTNYPFYRDNKQGWQ 145



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 32/40 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI 142
           NSIRHNLSLN+ F+KVPR+ ++PGKG++W +D   E ++ 
Sbjct: 146 NSIRHNLSLNKCFVKVPRNFDDPGKGNYWMLDATCEDEVF 185


>gi|3171239|gb|AAC18392.1| transcription factor BF-1 [Branchiostoma floridae]
          Length = 402

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 43/71 (60%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R     R+   
Sbjct: 156 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAAARSRLA 215

Query: 163 LSSRCTLRFPS 173
                 +R+P+
Sbjct: 216 FRRGFGVRYPA 226



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 110 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 155


>gi|443719885|gb|ELU09837.1| hypothetical protein CAPTEDRAFT_154409 [Capitella teleta]
          Length = 253

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 34/49 (69%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ 151
           NSIRHNLSLN  F KVPR+  +PGKGS+W IDP  E       FRR+R+
Sbjct: 188 NSIRHNLSLNDCFKKVPRADNDPGKGSYWTIDPNCEKMFDNGNFRRKRK 236



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  +  ++LTL+ IY F+++ +P+Y+ +  GWQ
Sbjct: 142 RPPYSYSALIAMAIQQSPTRRLTLAAIYRFVSEQFPFYKRSKTGWQ 187


>gi|260830563|ref|XP_002610230.1| hypothetical protein BRAFLDRAFT_286825 [Branchiostoma floridae]
 gi|229295594|gb|EEN66240.1| hypothetical protein BRAFLDRAFT_286825 [Branchiostoma floridae]
          Length = 402

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 43/71 (60%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R     R+   
Sbjct: 156 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAAARSRLA 215

Query: 163 LSSRCTLRFPS 173
                 +R+P+
Sbjct: 216 FRRGFGVRYPA 226



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 110 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 155


>gi|195435023|ref|XP_002065501.1| GK15484 [Drosophila willistoni]
 gi|194161586|gb|EDW76487.1| GK15484 [Drosophila willistoni]
          Length = 468

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 3/81 (3%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 184 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 243

Query: 163 LSSRCTL---RFPSTNIRLQF 180
              R  +    FPS     QF
Sbjct: 244 AFKRSLIGPSMFPSLAAYPQF 264



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 134 KGNEKPPYSYNALIMMAIRQSQEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 183


>gi|116207980|ref|XP_001229799.1| hypothetical protein CHGG_03283 [Chaetomium globosum CBS 148.51]
 gi|88183880|gb|EAQ91348.1| hypothetical protein CHGG_03283 [Chaetomium globosum CBS 148.51]
          Length = 769

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 38/47 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN+ F+K  R +++PGKGS+W I+PG+EH ++++   R+
Sbjct: 252 NSIRHNLSLNKSFVKQERPKDDPGKGSYWSIEPGTEHTVLKEKPSRK 298



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 33/52 (63%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +  D +KP +SYA LI  A+  +  ++LTLS IY +I+  Y YY+  + GWQ
Sbjct: 200 VIDDGTKPNHSYATLIAMAIVRSPQRRLTLSQIYKWISDTYSYYQGDNTGWQ 251


>gi|270004635|gb|EFA01083.1| hypothetical protein TcasGA2_TC004006 [Tribolium castaneum]
          Length = 260

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A++SA  ++LTLSGIY FI  N+PYYR   +GWQ
Sbjct: 46  KPPYSYIALIAMAISSAPKERLTLSGIYRFIMDNFPYYRENKQGWQ 91



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 27/40 (67%), Gaps = 7/40 (17%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEP-------GKGSFWRIDP 135
           NSIRHNLSLN  F+KVPR +  P       GKGS+W +DP
Sbjct: 92  NSIRHNLSLNDCFVKVPRDKVSPRGPEQAGGKGSYWMLDP 131


>gi|358331753|dbj|GAA50519.1| forkhead box protein J2/3 [Clonorchis sinensis]
          Length = 362

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 13/86 (15%)

Query: 253 LHNRRN---VSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDK 309
           LHN RN   V+AD               +    +I Q + KPPYSYA LI  A+ S+ +K
Sbjct: 162 LHNIRNPPGVTAD----------DNKTDSECGSAICQPEGKPPYSYASLITAAIQSSQEK 211

Query: 310 QLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++TLS IY +I +N+PYY  A  GW+
Sbjct: 212 RMTLSEIYQWICENFPYYCEAGGGWK 237



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 5/65 (7%)

Query: 87  NFFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRI--DPGSEHKLIEQ 144
           NF   C    G     NSIRHNLSLN+ F KVPRS+++PGKGS+W +  D G E+     
Sbjct: 225 NFPYYCEAGGGW---KNSIRHNLSLNKSFTKVPRSRDDPGKGSYWCLSSDVGHEYDFSTS 281

Query: 145 AFRRR 149
             ++R
Sbjct: 282 CLKKR 286


>gi|195471177|ref|XP_002087882.1| GE18263 [Drosophila yakuba]
 gi|194173983|gb|EDW87594.1| GE18263 [Drosophila yakuba]
          Length = 451

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 225 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 284

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FP      QF   +     AP+
Sbjct: 285 AFKRSLIGPMFPGLAAYPQFGQFLTYPPTAPS 316



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 175 KGNEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 224


>gi|307201887|gb|EFN81516.1| Forkhead box protein J1-B [Harpegnathos saltator]
          Length = 301

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 39/52 (75%), Gaps = 4/52 (7%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           NSIRHNLSLN+ FIK+PRS++EPGKG FW++D     + +E+  R RR+  +
Sbjct: 143 NSIRHNLSLNKCFIKLPRSKDEPGKGGFWKLD----IERMEEGKRSRRRSAI 190



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 36/48 (75%), Gaps = 1/48 (2%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D+KPP+SYA +I  A+  A++ +++LS IY++I +N+ +Y+ AD  WQ
Sbjct: 96  DAKPPFSYATIICLAM-RANNNKVSLSNIYAWIRENFLFYKYADPAWQ 142


>gi|441667630|ref|XP_003261005.2| PREDICTED: forkhead box protein G1, partial [Nomascus leucogenys]
          Length = 560

 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 271 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 316



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 317 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 366


>gi|18858707|ref|NP_571142.1| forkhead box protein G1 [Danio rerio]
 gi|3171241|gb|AAC18393.1| transcription factor BF-1 [Danio rerio]
          Length = 420

 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 113 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 158



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 159 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 208


>gi|157429|gb|AAA28534.1| fork head domain DNA binding protein [Drosophila melanogaster]
          Length = 128

 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR    PGKG+FW +DP +E      +F RRR+R
Sbjct: 62  NSIRHNLSLNDCFIKVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKR 111



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYY+     WQ
Sbjct: 16  KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQ 61


>gi|348536502|ref|XP_003455735.1| PREDICTED: forkhead box protein G1-like [Oreochromis niloticus]
          Length = 308

 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 80  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYREHKQGWQ 125



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 126 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 175


>gi|307184440|gb|EFN70849.1| Forkhead box protein J1 [Camponotus floridanus]
          Length = 308

 Score = 63.9 bits (154), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 4/52 (7%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           NSIRHNLSLN+ F+K+PRS++EPGKG FW++D     + +E++ R RR+  +
Sbjct: 150 NSIRHNLSLNKCFVKLPRSKDEPGKGGFWKLD----LERMEESKRSRRRSAI 197



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 36/48 (75%), Gaps = 1/48 (2%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D+KPP+SYA +I  A+  A++ +++LS IY++I +N+ +Y+ AD  WQ
Sbjct: 103 DAKPPFSYATIICLAM-RANNNKVSLSNIYAWIRENFLFYKYADPAWQ 149


>gi|358342479|dbj|GAA36751.2| forkhead box protein G1 [Clonorchis sinensis]
          Length = 577

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 36/46 (78%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+ S+ +K+LTL+GIY FIT N+PYY+   +GWQ
Sbjct: 219 KPPFSYNALIMMAIRSSPEKRLTLNGIYDFITSNFPYYKDNKQGWQ 264



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR+ ++PGKG++W +DP  E   I     + R+R
Sbjct: 265 NSIRHNLSLNKCFVKVPRAYDDPGKGNYWMLDPSCEDVYIGGTTGKLRRR 314


>gi|410900666|ref|XP_003963817.1| PREDICTED: forkhead box protein G1-like [Takifugu rubripes]
          Length = 405

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 110 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYREHKQGWQ 155



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 156 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 205


>gi|242021691|ref|XP_002431277.1| Forkhead box protein D3, putative [Pediculus humanus corporis]
 gi|212516534|gb|EEB18539.1| Forkhead box protein D3, putative [Pediculus humanus corporis]
          Length = 410

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIK+PR    PGKG++W +DP +E      +F RRR+R
Sbjct: 193 NSIRHNLSLNDCFIKIPREPGNPGKGNYWTLDPMAEDMFDNGSFLRRRKR 242



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYYR     WQ
Sbjct: 147 KPPYSYIALITMAILQSPRKKLTLSGICEFIMSRFPYYREKFPAWQ 192


>gi|68085623|gb|AAH76476.2| Forkhead box I1 [Danio rerio]
 gi|182891584|gb|AAI64810.1| Foxi1 protein [Danio rerio]
          Length = 377

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R +++PGKG++W +DP  E       FRR+R+R
Sbjct: 187 NSIRHNLSLNDCFKKVARDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 236



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +A DK+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 141 RPPYSYSALIAMAIQNAQDKKLTLSQIYQYVADNFPFYKKSKAGWQ 186


>gi|32189364|ref|NP_859424.1| forkhead box i1 [Danio rerio]
 gi|28207739|gb|AAO32141.1| forkhead transcription factor i1 [Danio rerio]
          Length = 377

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R +++PGKG++W +DP  E       FRR+R+R
Sbjct: 187 NSIRHNLSLNDCFKKVARDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 236



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +A DK+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 141 RPPYSYSALIAMAIQNAQDKKLTLSQIYQYVADNFPFYKKSKAGWQ 186


>gi|189236010|ref|XP_966372.2| PREDICTED: similar to Fork head domain-containing protein FD2
           [Tribolium castaneum]
          Length = 255

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 34/47 (72%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            KPPYSY  LI  A++SA  ++LTLSGIY FI  N+PYYR   +GWQ
Sbjct: 45  EKPPYSYIALIAMAISSAPKERLTLSGIYRFIMDNFPYYRENKQGWQ 91



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 7/42 (16%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEP-------GKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR +  P       GKGS+W +DP +
Sbjct: 92  NSIRHNLSLNDCFVKVPRDKVSPRGPEQAGGKGSYWMLDPKA 133


>gi|87622884|gb|ABD38851.1| forkhead box G1 [Psammobates geometricus]
          Length = 462

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 154 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 199



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 200 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 249


>gi|118343786|ref|NP_001071713.1| transcription factor protein [Ciona intestinalis]
 gi|70569610|dbj|BAE06443.1| transcription factor protein [Ciona intestinalis]
          Length = 581

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R +++PGKG++W +DP  E       FRR+R+R
Sbjct: 304 NSIRHNLSLNDCFKKVARDEDDPGKGNYWSLDPNCEKMFDNGNFRRKRKR 353



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ ++ +K+LTLS IY ++ +N+P+Y+ +  GWQ
Sbjct: 258 RPPYSYSALIAMAIQNSPEKKLTLSQIYQYVAENFPFYKKSRAGWQ 303


>gi|225555860|gb|EEH04150.1| forkhead box protein C2 [Ajellomyces capsulatus G186AR]
          Length = 731

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 14/111 (12%)

Query: 225 HTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSI 284
           H +   +P P P  + + A++ P  P  L+NR      + M +     ++N         
Sbjct: 304 HKDRQITPPPRPR-SPNTADAPPPKPSPLYNR-----GMMMESTEDIDYSN--------D 349

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S  D KPPYSYA +I QA+ S  +++LTLS IY++IT+ Y +YR  + GWQ
Sbjct: 350 SAKDLKPPYSYATMIAQAIFSTEEEKLTLSKIYAYITEKYAFYRHTNSGWQ 400



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 6/93 (6%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F KVPR  +EPGKG  W+I P    +   +  RR   +      +P G
Sbjct: 401 NSIRHNLSLNKAFQKVPRRTDEPGKGMKWQIAPEFRQEYWNKQTRRSNNQQSSAPSSPVG 460

Query: 163 LSSRCTLRFPSTNIRL----QFQSLVNESDPAP 191
             ++   R  STN +      F+S    S+P+P
Sbjct: 461 KENKGGSR--STNGQTGYDKSFESSFPTSNPSP 491



 Score = 41.6 bits (96), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 21/97 (21%)

Query: 31  KSGTAIAKLQGREFEYMVRQKRITIGRNSSRG------------------DVDVNMGLSS 72
           +S  A AK+ GR++ Y ++   I IGR   R                   +V +++G + 
Sbjct: 108 ESVKAYAKIAGRDWTYYMKGLHINIGRPPDRDQRIYAQSSPLVAAAQAMPEVHIDLGPNK 167

Query: 73  FISRRHIEIFF---EHPNFFMTCNGKNGVFVDGNSIR 106
           F+SR H EI F   E   + +  NG+NG+ ++   ++
Sbjct: 168 FVSRLHAEILFNSQEPIGWHIRVNGRNGIRLNTQIVK 204


>gi|45383962|ref|NP_990524.1| forkhead box protein G1 [Gallus gallus]
 gi|3023381|sp|Q90964.1|FOXG1_CHICK RecName: Full=Forkhead box protein G1; Short=FoxG1; AltName:
           Full=Brain factor 1; Short=BF-1; Short=BF1; Short=cBF-1;
           AltName: Full=CEQ 3-1; AltName: Full=Forkhead-related
           protein FKHL1; AltName: Full=N-62-5; AltName:
           Full=Proto-oncogene C-QIN
 gi|642603|gb|AAA66954.1| putative [Gallus gallus]
 gi|1546782|gb|AAB08466.1| chicken brain factor-1 [Gallus gallus]
          Length = 451

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 143 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 188



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 189 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 238


>gi|426248818|ref|XP_004018155.1| PREDICTED: forkhead box protein G1 [Ovis aries]
          Length = 553

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 245 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 290



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 291 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 340


>gi|148223645|ref|NP_001079165.1| forkhead box protein G1 [Xenopus laevis]
 gi|82249050|sp|Q9YHC5.1|FOXG1_XENLA RecName: Full=Forkhead box protein G1; Short=FoxG1; AltName:
           Full=Brain factor 1; Short=BF-1; Short=xBF-1;
           Short=xBF1; AltName: Full=Forkhead protein 4;
           Short=FKH-4; Short=xFKH4
 gi|3925517|gb|AAC79501.1| brain factor-1 [Xenopus laevis]
          Length = 436

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 128 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 173



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 174 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 223


>gi|348508554|ref|XP_003441819.1| PREDICTED: forkhead box protein I2-like [Oreochromis niloticus]
          Length = 376

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R +++PGKG++W +DP  E       FRR+R+R
Sbjct: 176 NSIRHNLSLNDCFKKVARDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 225



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +A DK+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 130 RPPYSYSALIAMAIQNAQDKKLTLSQIYQYVADNFPFYKKSKAGWQ 175


>gi|256080634|ref|XP_002576584.1| forkhead protein/ forkhead protein domain [Schistosoma mansoni]
 gi|353229329|emb|CCD75500.1| putative forkhead protein/ forkhead protein domain [Schistosoma
           mansoni]
          Length = 504

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 14/96 (14%)

Query: 57  RNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNLSLNRYFI 116
           RNSS   + +N G+  FI+           NF    N K G     NSIRHNLSLN+ F+
Sbjct: 97  RNSSEKRLTLN-GIYDFITT----------NFPYYKNNKQGW---QNSIRHNLSLNKCFV 142

Query: 117 KVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           KVPR+ ++PGKG++W +DP  E   I     + R+R
Sbjct: 143 KVPRAYDDPGKGNYWMLDPSCEDVYIGGTTGKLRRR 178



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 31/41 (75%)

Query: 295 YAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           Y  LI+ A+ ++ +K+LTL+GIY FIT N+PYY+   +GWQ
Sbjct: 88  YNALIMMAIRNSSEKRLTLNGIYDFITTNFPYYKNNKQGWQ 128


>gi|213410236|ref|XP_002175888.1| meiosis-specific transcription factor mei4 [Schizosaccharomyces
           japonicus yFS275]
 gi|212003935|gb|EEB09595.1| meiosis-specific transcription factor mei4 [Schizosaccharomyces
           japonicus yFS275]
          Length = 579

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY+ +I QA+ S  D  +TLS IYS+I  +YPYYRT   GWQ
Sbjct: 225 NQKPPYSYSVMIAQAILSTSDSMMTLSKIYSWIQDHYPYYRTTKSGWQ 272



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPG-SEHKLIEQAFRRRRQ 151
           NSIRHNLSLN+ F KVPR   E GKG  W I P   E  LI+     +R+
Sbjct: 273 NSIRHNLSLNKAFHKVPRKCGEIGKGMKWSIAPEYREEFLIKARLSSKRK 322



 Score = 43.5 bits (101), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 10/87 (11%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGD--------VDVNMGLSSFISRRHIEIFFE-- 84
           A AK  G  + Y V++ RI +GR  +           VD++ G S  ISR+H  + F+  
Sbjct: 79  AYAKFAGSTWTYYVQKLRIVLGREPNGSSSAPPNVEPVDMDFGPSKLISRKHAVVVFDLN 138

Query: 85  HPNFFMTCNGKNGVFVDGNSIRHNLSL 111
              +  T +G+NG+ V+G +   N S+
Sbjct: 139 TQQWNCTVHGRNGIRVNGKTYAANSSV 165


>gi|476976|pir||A47446 HNF-3/fork head family transcription factor Qin - avian sarcoma
           virus 31
          Length = 387

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 151 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 196



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 197 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTDKLRRR 246


>gi|395503647|ref|XP_003756175.1| PREDICTED: forkhead box protein G1-like [Sarcophilus harrisii]
          Length = 565

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 257 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 302



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 303 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 352


>gi|87622882|gb|ABD38850.1| forkhead box G1 [Crocodylus niloticus]
          Length = 462

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 154 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 199



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 200 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 249


>gi|28971641|dbj|BAC65248.1| brain factor 1 [Oryzias latipes]
          Length = 187

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 35/47 (74%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 108 EKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 154



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/33 (66%), Positives = 29/33 (87%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP 135
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP
Sbjct: 155 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDP 187


>gi|3024490|sp|P56260.1|QIN_AVIS3 RecName: Full=Transforming protein Qin; AltName: Full=Oncogene Qin
          Length = 387

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 143 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 188



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 189 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTDKLRRR 238


>gi|403264852|ref|XP_003924681.1| PREDICTED: forkhead box protein G1 [Saimiri boliviensis
           boliviensis]
          Length = 454

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 146 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 191



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 192 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 241


>gi|11178689|gb|AAG32544.2| transcription factor Qin [Avian sarcoma virus 31]
          Length = 395

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 151 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 196



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 197 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTDKLRRR 246


>gi|348527448|ref|XP_003451231.1| PREDICTED: forkhead box protein G1-like [Oreochromis niloticus]
          Length = 441

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 123 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 168



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 169 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 218


>gi|158518470|ref|NP_001103516.1| forkhead box J3 [Xenopus (Silurana) tropicalis]
 gi|157422824|gb|AAI53348.1| foxj3 protein [Xenopus (Silurana) tropicalis]
          Length = 603

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +     QA  R+R R       P+ 
Sbjct: 109 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDAA-QARPRKRPRSEERASTPYS 167

Query: 163 LSS 165
           + S
Sbjct: 168 IDS 170



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYY+ A  GW+
Sbjct: 61  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYKEAGSGWK 108


>gi|87622886|gb|ABD38852.1| forkhead box G1 [Agama atra]
          Length = 469

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 161 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 206



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 207 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 256


>gi|397503946|ref|XP_003822573.1| PREDICTED: forkhead box protein G1-like [Pan paniscus]
          Length = 437

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 129 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 174



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 175 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 224


>gi|183986689|ref|NP_001116933.1| forkhead box G1 [Xenopus (Silurana) tropicalis]
 gi|166796864|gb|AAI59145.1| foxg1 protein [Xenopus (Silurana) tropicalis]
          Length = 432

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 124 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 169



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 170 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 219


>gi|119615822|gb|EAW95416.1| forkhead box C2 (MFH-1, mesenchyme forkhead 1), isoform CRA_b [Homo
           sapiens]
          Length = 461

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|32140765|gb|AAO63568.1| foxi one [Danio rerio]
          Length = 419

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R +++PGKG++W +DP  E       FRR+R+R
Sbjct: 229 NSIRHNLSLNDCFKKVARDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 278



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +A DK+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 183 RPPYSYSALIAMAIQNAQDKKLTLSQIYQYVADNFPFYKKSKAGWQ 228


>gi|317419532|emb|CBN81569.1| Forkhead box protein I2-A [Dicentrarchus labrax]
          Length = 380

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R +++PGKG++W +DP  E       FRR+R+R
Sbjct: 177 NSIRHNLSLNDCFKKVARDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 226



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +  DK+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 131 RPPYSYSALIAMAIQNTQDKKLTLSQIYQYVADNFPFYKKSKAGWQ 176


>gi|195032370|ref|XP_001988487.1| GH11194 [Drosophila grimshawi]
 gi|193904487|gb|EDW03354.1| GH11194 [Drosophila grimshawi]
          Length = 478

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 255 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 314

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FP      QF   +     AP+
Sbjct: 315 AFKRSLIGPMFPGLAAYPQFGQFLAYPQAAPS 346



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 207 NEKPPYSYNALIMMAIRQSQEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 254


>gi|194855836|ref|XP_001968626.1| GG24972 [Drosophila erecta]
 gi|190660493|gb|EDV57685.1| GG24972 [Drosophila erecta]
          Length = 452

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FP      QF   +     AP+
Sbjct: 286 AFKRSLIGPMFPGLAAYPQFGQFLTYPPTAPS 317



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 178 NEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 225


>gi|1082850|pir||A54743 transcription factor HFK1 - human
          Length = 476

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 169 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 214



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 215 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 264


>gi|432902655|ref|XP_004077031.1| PREDICTED: forkhead box protein G1-like [Oryzias latipes]
          Length = 391

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 116 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYREHKQGWQ 161



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 162 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 211


>gi|327259387|ref|XP_003214519.1| PREDICTED: forkhead box protein G1-like [Anolis carolinensis]
          Length = 482

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 157 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 202



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 203 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 252


>gi|126282038|ref|XP_001364896.1| PREDICTED: forkhead box protein G1-like isoform 1 [Monodelphis
           domestica]
          Length = 503

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 195 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 240



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 241 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 290


>gi|340383167|ref|XP_003390089.1| PREDICTED: hypothetical protein LOC100631674 [Amphimedon
           queenslandica]
          Length = 378

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 5/56 (8%)

Query: 285 SQDDS----KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT-ADKGWQ 335
           S DD     KPPYSY  LI  A+ S ++K+LTL+GIY FITKN+PYYR   ++GW+
Sbjct: 86  SADDKMANVKPPYSYVALISMAIQSCNEKRLTLNGIYDFITKNFPYYRNRENQGWR 141



 Score = 42.0 bits (97), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 24/36 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSL+  F+K+P    + GK  +W +DP  E
Sbjct: 142 NSIRHNLSLHECFMKLPAKGGKNGKSHYWVLDPNHE 177


>gi|195996907|ref|XP_002108322.1| hypothetical protein TRIADDRAFT_19948 [Trichoplax adhaerens]
 gi|190589098|gb|EDV29120.1| hypothetical protein TRIADDRAFT_19948, partial [Trichoplax
           adhaerens]
          Length = 133

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + DK+LTLS IY +I KNYP+YR   +GWQ
Sbjct: 34  KPPFSYNALIMMAIRDSPDKKLTLSNIYEYIMKNYPFYRENKQGWQ 79



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 34/51 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           NSIRHNLSLN+ F+K+PR  ++PGKG++W +D   +   I     + R+R 
Sbjct: 80  NSIRHNLSLNKCFVKMPRHYDDPGKGNYWALDQSCDDVEIGSVTGKLRRRN 130


>gi|348041298|ref|NP_998079.2| forkhead box G1b [Danio rerio]
          Length = 341

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 77  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYREHKQGWQ 122



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 123 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 172


>gi|165979115|gb|ABY77003.1| FoxC1 [Scyliorhinus canicula]
          Length = 462

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 6/83 (7%)

Query: 259 VSADLHMAAH-----YAAAHTNVVNHMSLSIS-QDDSKPPYSYAQLIVQAVASAHDKQLT 312
           + A + M +H     YAA       H S     +D  KPPYSY  LI  A+ +A DK++T
Sbjct: 34  MPAPMSMYSHPAHEQYAAGMARSYGHYSPQPQPKDMVKPPYSYIALITMAIQNAPDKKIT 93

Query: 313 LSGIYSFITKNYPYYRTADKGWQ 335
           L+GIY FI + +P+YR   +GWQ
Sbjct: 94  LNGIYQFIMERFPFYRENKQGWQ 116



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 160


>gi|134024034|gb|AAI35134.1| foxl1 protein [Xenopus (Silurana) tropicalis]
          Length = 430

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 35/53 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVP 155
           NSIRHNLSLN  FIKVPR +  PGKGS+W +DP          FRRR+++  P
Sbjct: 121 NSIRHNLSLNDCFIKVPREKGRPGKGSYWTLDPKCLDMFENGNFRRRKRKPKP 173



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 5/64 (7%)

Query: 272 AHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTAD 331
           A TNV+     S  +   KPPYSY  LI  A+  + D ++TL+GIY FI   +P+Y    
Sbjct: 62  ASTNVI-----SRQEPPQKPPYSYIALIAMAIKDSPDHRVTLNGIYQFIMDRFPFYHDNK 116

Query: 332 KGWQ 335
           +GWQ
Sbjct: 117 QGWQ 120


>gi|34596581|gb|AAQ76878.1| FOXD4 [Homo sapiens]
          Length = 494

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+K+PR    PGKG++W +DP S+      +F RRR+R
Sbjct: 150 NSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKR 199



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 31/51 (60%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++  +KPP SY  LI  A+  +  K+LTLSGI +FI+  +PYY      WQ
Sbjct: 99  ARQPAKPPSSYIALITMAILQSPHKRLTLSGICAFISGRFPYYCRKFPAWQ 149


>gi|410898742|ref|XP_003962856.1| PREDICTED: forkhead box protein G1-like [Takifugu rubripes]
          Length = 424

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 107 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 152



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 153 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 202


>gi|47225833|emb|CAF98313.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 313

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLS N  FIK+PR  ++PGKGSFW + PG        +F RRR+R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPGCGDMFENGSFLRRRKR 108



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 28/48 (58%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY  L   A+ S  +K L LS IY FI   +PYYR   + WQ
Sbjct: 11  DQKPPYSYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQ 58


>gi|171686468|ref|XP_001908175.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943195|emb|CAP68848.1| unnamed protein product [Podospora anserina S mat+]
          Length = 778

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 38/47 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN++FIK  R +++PGKG++W I+PG+EH  +++   R+
Sbjct: 253 NSIRHNLSLNKHFIKQERPKDDPGKGNYWAIEPGAEHLFMKEKPSRK 299



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 32/52 (61%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           I  D SKP +SYA LI  A+  +  ++LTL+ IY +I+  Y +Y   D GWQ
Sbjct: 201 IIDDGSKPGHSYATLIGMAILRSPQRRLTLAQIYKWISDTYSFYNANDAGWQ 252


>gi|240977041|ref|XP_002402584.1| fork head domain protein, putative [Ixodes scapularis]
 gi|215491210|gb|EEC00851.1| fork head domain protein, putative [Ixodes scapularis]
          Length = 327

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+K+PR    PGKG++W +DP SE      +F RRR+R
Sbjct: 155 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPASEDMFDNGSFLRRRKR 204



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 29/46 (63%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  + +K+LTLSGI  FI   +P+YR     WQ
Sbjct: 109 KPPYSYIALITMAILQSPEKRLTLSGICEFIRNRFPFYRDKYPMWQ 154


>gi|189442474|gb|AAI67316.1| foxi2 protein [Xenopus (Silurana) tropicalis]
          Length = 369

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 36/59 (61%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF 161
           NSIRHNLSLN  F KV R   +PGKG++W +DP  E       FRR+R+R +    A F
Sbjct: 170 NSIRHNLSLNDCFKKVARDDNDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKLESVEAGF 228



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +  +K+LTLS IYS++ +N+P+Y+ +  GWQ
Sbjct: 124 RPPYSYSSLIAMAIQNNPEKKLTLSQIYSYVAENFPFYKKSKAGWQ 169


>gi|410895415|ref|XP_003961195.1| PREDICTED: forkhead box protein I2-A-like [Takifugu rubripes]
          Length = 372

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R +++PGKG++W +DP  E       FRR+R+R
Sbjct: 177 NSIRHNLSLNDCFKKVARDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 226



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +A DK+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 131 RPPYSYSALIAMAIQNAQDKKLTLSQIYQYVADNFPFYKKSKAGWQ 176


>gi|45709947|gb|AAH67725.1| Zgc:85969 [Danio rerio]
          Length = 333

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 69  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYREHKQGWQ 114



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 115 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 164


>gi|426376614|ref|XP_004055090.1| PREDICTED: forkhead box protein G1 [Gorilla gorilla gorilla]
          Length = 439

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 131 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 176



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 177 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 226


>gi|45361375|ref|NP_989265.1| forkhead box protein I1 [Xenopus (Silurana) tropicalis]
 gi|82186245|sp|Q6P2Z3.1|FOXI1_XENTR RecName: Full=Forkhead box protein I1; Short=FoxI1
 gi|39795838|gb|AAH64241.1| forkhead box I4, gene 2 [Xenopus (Silurana) tropicalis]
 gi|89267433|emb|CAJ81516.1| forkhead box I1 [Xenopus (Silurana) tropicalis]
          Length = 363

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 1/111 (0%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F KVPR + +PGKG++W +DP  E       FRR+R+       A   
Sbjct: 171 NSIRHNLSLNDCFKKVPRDENDPGKGNYWTLDPNCEKMFDNGNFRRKRKPKSDANSAKIA 230

Query: 163 LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLL 213
                 L  P         +  +  +P+PTG S S S   V   P  ++ +
Sbjct: 231 KIGEDHLN-PKGKESPPMITPSSPEEPSPTGHSKSPSPPAVTYTPCLTNFI 280



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+  A D++LTLS IY ++ +N+P+Y+ +  GWQ
Sbjct: 125 RPPYSYSALIAMAIQHASDRRLTLSQIYQYVAENFPFYKKSKAGWQ 170


>gi|301613110|ref|XP_002936059.1| PREDICTED: hypothetical protein LOC100038263 [Xenopus (Silurana)
           tropicalis]
          Length = 495

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 35/53 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVP 155
           NSIRHNLSLN  FIKVPR +  PGKGS+W +DP          FRRR+++  P
Sbjct: 186 NSIRHNLSLNDCFIKVPREKGRPGKGSYWTLDPKCLDMFENGNFRRRKRKPKP 238



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 5/64 (7%)

Query: 272 AHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTAD 331
           A TNV+     S  +   KPPYSY  LI  A+  + D ++TL+GIY FI   +P+Y    
Sbjct: 127 ASTNVI-----SRQEPPQKPPYSYIALIAMAIKDSPDHRVTLNGIYQFIMDRFPFYHDNK 181

Query: 332 KGWQ 335
           +GWQ
Sbjct: 182 QGWQ 185


>gi|328787799|ref|XP_003251005.1| PREDICTED: hypothetical protein LOC724740 [Apis mellifera]
          Length = 427

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP SE   I     + R+R
Sbjct: 157 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRR 206



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 47/78 (60%)

Query: 258 NVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIY 317
           + S +   +A+ +A H +  +  +    +   KPPYSY  LI+ A+  + +K+LTL+GIY
Sbjct: 79  DCSRNAATSANSSAEHKDCKDRQNSDEKKKCEKPPYSYNALIMMAIRQSPEKRLTLNGIY 138

Query: 318 SFITKNYPYYRTADKGWQ 335
            +I +++PYY    +GWQ
Sbjct: 139 EYIMRHFPYYENNKQGWQ 156


>gi|516381|emb|CAA52239.1| transcription factor [Homo sapiens]
 gi|1098060|prf||2115219B brain factor 1
          Length = 477

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 169 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 214



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 215 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 264


>gi|410908018|ref|XP_003967488.1| PREDICTED: forkhead box protein B1-like [Takifugu rubripes]
 gi|410908020|ref|XP_003967489.1| PREDICTED: forkhead box protein B1-like [Takifugu rubripes]
          Length = 313

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLS N  FIK+PR  ++PGKGSFW + PG        +F RRR+R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPGCGDMFENGSFLRRRKR 108



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 28/48 (58%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY  L   A+ S  +K L LS IY FI   +PYYR   + WQ
Sbjct: 11  DQKPPYSYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQ 58


>gi|17945189|gb|AAL48653.1| RE11345p [Drosophila melanogaster]
 gi|134085522|gb|ABO52820.1| FI01001p [Drosophila melanogaster]
          Length = 451

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FP      QF   +     AP+
Sbjct: 286 AFKRSLIGPMFPGLAAYPQFGQFLTYPPTAPS 317



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 178 NEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 225


>gi|6679843|ref|NP_032267.1| forkhead box protein G1 [Mus musculus]
 gi|231571677|ref|NP_001153584.1| forkhead box protein G1 [Mus musculus]
 gi|2494483|sp|Q60987.1|FOXG1_MOUSE RecName: Full=Forkhead box protein G1; Short=FoxG1; AltName:
           Full=Brain factor 1; Short=BF-1; Short=BF1; AltName:
           Full=Forkhead-related protein FKHL1
 gi|1036833|gb|AAB42158.1| brain factor-1 [Mus musculus]
 gi|37574007|gb|AAH46958.2| Forkhead box G1 [Mus musculus]
 gi|74205597|dbj|BAE21092.1| unnamed protein product [Mus musculus]
          Length = 481

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 173 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 218



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 219 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 268


>gi|395838308|ref|XP_003792058.1| PREDICTED: forkhead box protein G1-like [Otolemur garnettii]
          Length = 405

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 97  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 142



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 143 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 192


>gi|390468911|ref|XP_002753744.2| PREDICTED: forkhead box protein G1 isoform 1 [Callithrix jacchus]
          Length = 496

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 179 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 224



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 225 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 274


>gi|390468909|ref|XP_003734023.1| PREDICTED: forkhead box protein G1 isoform 2 [Callithrix jacchus]
          Length = 478

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 161 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 206



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 207 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 256


>gi|410922008|ref|XP_003974475.1| PREDICTED: forkhead box C1-A-like [Takifugu rubripes]
          Length = 480

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 15/73 (20%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF---------------R 147
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F               +
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVQKEK 177

Query: 148 RRRQRGVPCFRAP 160
             RQ   PC R P
Sbjct: 178 EERQEKDPCSRTP 190



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ ++ +K++TL+GIY FI + +P+YR   +GWQ
Sbjct: 68  KDMVKPPYSYIALITMAIQNSAEKKITLNGIYQFIMERFPFYRENKQGWQ 117


>gi|253683453|ref|NP_001156630.1| forkhead box G1 [Oryzias latipes]
 gi|226441728|gb|ACO57466.1| forkhead box G1 [Oryzias latipes]
          Length = 348

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 59  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 104



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 105 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 154


>gi|195342364|ref|XP_002037771.1| GM18443 [Drosophila sechellia]
 gi|194132621|gb|EDW54189.1| GM18443 [Drosophila sechellia]
          Length = 450

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 225 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 284

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FP      QF   +     AP+
Sbjct: 285 AFKRSLIGPMFPGLAAYPQFGQFLTYPPTAPS 316



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 177 NEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 224


>gi|406865849|gb|EKD18890.1| forkhead box protein L2 [Marssonina brunnea f. sp. 'multigermtubi'
           MB_m1]
          Length = 762

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 22/197 (11%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR---RQRGVPCFR- 158
           NSIRHNLSLN+ FIK  R +++PGKG++W I+PG EH  I++   ++       VP    
Sbjct: 266 NSIRHNLSLNKAFIKQERPKDDPGKGNYWAIEPGMEHLFIKERIPKKPAGPNENVPVLST 325

Query: 159 --APFGLSSRCTLRFPSTNIRL----QFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSL 212
             +P  L      + P    R       QS    S+  PT Q +SS        P + + 
Sbjct: 326 NLSPANLPETALFKAPPPPARTPELPPSQSKCQISENLPTIQELSSDATI----PCSDAC 381

Query: 213 LPPLRINIPDHPHTEISSSPFPSPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAA 272
                 N+     TE+ SSP    +  ++A +S P   R    R +    +   +  +  
Sbjct: 382 NTEPENNV----ETEVPSSPLIQSSPPMAAMHSSPPVARQTQKRNDTPPPVPRFSSSSET 437

Query: 273 HTNVVNHMSLSISQDDS 289
           H++   H S+    DDS
Sbjct: 438 HSHKRKHASM----DDS 450



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 34/52 (65%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +  D +KP +SYAQLI  ++  A +++LTL+ IY +I+  Y +Y   + GWQ
Sbjct: 214 LHDDGNKPHHSYAQLIGMSILRATNRRLTLAQIYKWISDTYSFYNAQETGWQ 265


>gi|221111730|ref|XP_002158068.1| PREDICTED: uncharacterized protein LOC100208319 [Hydra
           magnipapillata]
          Length = 563

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 38/56 (67%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFR 158
           NSIRHNLSLN+ F K+PR++ +PGKG +W + P   +KL+E   R+RR   +   R
Sbjct: 191 NSIRHNLSLNKCFTKIPRNKGDPGKGGYWTVIPEFANKLLENNIRKRRTTMIDSCR 246



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 34/51 (66%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S +  KPPYSYA LI+ A+ S    ++TLS IY +I  ++P+Y+ A+  WQ
Sbjct: 140 SSESVKPPYSYAALIIMAMKSKVCGKMTLSEIYKWIGDHFPFYKYAEPSWQ 190


>gi|29477086|gb|AAH50072.1| Forkhead box G1 [Homo sapiens]
          Length = 489

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 181 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 226



 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 227 NSIRHNLSLNMCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 276


>gi|6978845|ref|NP_036692.1| forkhead box protein G1 [Rattus norvegicus]
 gi|399109|sp|Q00939.1|FOXG1_RAT RecName: Full=Forkhead box protein G1; Short=FoxG1; AltName:
           Full=Brain factor 1; Short=BF-1; Short=BF1; AltName:
           Full=Forkhead-related protein FKHL1
 gi|203135|gb|AAA40812.1| BF-1 [Rattus norvegicus]
 gi|149051193|gb|EDM03366.1| rCG62339 [Rattus norvegicus]
          Length = 480

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 172 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 217



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 218 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 267


>gi|332246836|ref|XP_003272561.1| PREDICTED: forkhead box protein C2 [Nomascus leucogenys]
          Length = 312

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|208968405|dbj|BAG74041.1| forkhead box D4-like 1 [synthetic construct]
          Length = 439

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+K+PR    PGKG++W +DP S+      +F RRR+R
Sbjct: 150 NSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKR 199



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 31/51 (60%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++  +KPP SY  LI  A+  +  K+LTLSGI +FI+  +PYY      WQ
Sbjct: 99  ARQPAKPPSSYIALITMAILQSPHKRLTLSGICAFISGRFPYYCRKFPAWQ 149


>gi|118574792|sp|Q1A1A4.1|FOXG1_PIPRU RecName: Full=Forkhead box protein G1; Short=FoxG1
 gi|87622874|gb|ABD38846.1| forkhead box G1 [Pipistrellus rusticus]
          Length = 484

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 176 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 221



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 222 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 271


>gi|449274748|gb|EMC83826.1| Forkhead box protein G1, partial [Columba livia]
          Length = 350

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 42  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 87



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 88  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 137


>gi|443734601|gb|ELU18532.1| hypothetical protein CAPTEDRAFT_88179, partial [Capitella teleta]
          Length = 92

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/46 (56%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  + DK+LTLSGIY++I K +PY+    KGWQ
Sbjct: 1   KPPYSYVALIAMAIKDSGDKRLTLSGIYAYIMKKFPYFEKNKKGWQ 46



 Score = 47.4 bits (111), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/33 (60%), Positives = 24/33 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP 135
           NSIRHNLSLN  F+KVPR      KG++W +DP
Sbjct: 47  NSIRHNLSLNECFVKVPREGGGERKGNYWSLDP 79


>gi|75677594|ref|NP_997188.2| forkhead box protein D4 [Homo sapiens]
 gi|311033480|sp|Q12950.4|FOXD4_HUMAN RecName: Full=Forkhead box protein D4; AltName:
           Full=Forkhead-related protein FKHL9; AltName:
           Full=Forkhead-related transcription factor 5;
           Short=FREAC-5; AltName: Full=Myeloid factor-alpha
 gi|58476090|gb|AAH89432.1| Forkhead box D4 [Homo sapiens]
 gi|187953277|gb|AAI36571.1| Forkhead box D4 [Homo sapiens]
 gi|223460382|gb|AAI36572.1| Forkhead box D4 [Homo sapiens]
          Length = 439

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+K+PR    PGKG++W +DP S+      +F RRR+R
Sbjct: 150 NSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKR 199



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++  +KPP SY  LI  A+  +  K+LTLSGI +FI+  +PYYR     WQ
Sbjct: 99  ARQPAKPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQ 149


>gi|307186112|gb|EFN71837.1| Fork head domain transcription factor slp2 [Camponotus floridanus]
          Length = 412

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP SE   I     + R+R
Sbjct: 150 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRR 199



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI+ A+  + DK+LTL+GIY +I +++PYY    +GWQ
Sbjct: 104 KPPYSYNALIMMAIRQSPDKRLTLNGIYEYIMRHFPYYENNKQGWQ 149


>gi|367049780|ref|XP_003655269.1| hypothetical protein THITE_2118774 [Thielavia terrestris NRRL 8126]
 gi|347002533|gb|AEO68933.1| hypothetical protein THITE_2118774 [Thielavia terrestris NRRL 8126]
          Length = 777

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 39/49 (79%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ 151
           NSIRHNLSLN+YF+K  R +++PGKG++W I+PG+E  ++++   R+ +
Sbjct: 252 NSIRHNLSLNKYFVKQERPKDDPGKGNYWIIEPGAEQSVLKEKPSRKAE 300



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT-ADKGWQ 335
           I  D SKP +SYA LI  A+  +  ++LTLS IY +IT  Y YYR  AD GWQ
Sbjct: 199 IIDDGSKPNHSYATLIAMAIVRSPQRRLTLSQIYKWITDTYEYYRVKADTGWQ 251


>gi|118574788|sp|Q1A1A5.1|FOXG1_CERPY RecName: Full=Forkhead box protein G1; Short=FoxG1
 gi|87622872|gb|ABD38845.1| forkhead box G1 [Chlorocebus pygerythrus]
          Length = 489

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 181 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 226



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 227 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 276


>gi|32307177|ref|NP_005240.3| forkhead box protein G1 [Homo sapiens]
 gi|402875877|ref|XP_003901719.1| PREDICTED: forkhead box protein G1-like [Papio anubis]
 gi|152031604|sp|P55316.2|FOXG1_HUMAN RecName: Full=Forkhead box protein G1; AltName: Full=Brain factor
           1; Short=BF-1; Short=BF1; AltName: Full=Brain factor 2;
           Short=BF-2; Short=BF2; Short=hBF-2; AltName:
           Full=Forkhead box protein G1A; AltName: Full=Forkhead
           box protein G1B; AltName: Full=Forkhead box protein G1C;
           AltName: Full=Forkhead-related protein FKHL1;
           Short=HFK1; AltName: Full=Forkhead-related protein
           FKHL2; Short=HFK2; AltName: Full=Forkhead-related
           protein FKHL3; Short=HFK3
 gi|119586382|gb|EAW65978.1| hCG1642160 [Homo sapiens]
          Length = 489

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 181 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 226



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 227 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 276


>gi|297488127|ref|XP_002707820.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein G1 [Bos
           taurus]
 gi|296475381|tpg|DAA17496.1| TPA: forkhead box protein G1-like [Bos taurus]
          Length = 491

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 183 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 228



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 229 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 278


>gi|118574791|sp|Q1A1A2.1|FOXG1_EQUBU RecName: Full=Forkhead box protein G1; Short=FoxG1
 gi|87622878|gb|ABD38848.1| forkhead box G1 [Equus burchellii]
          Length = 488

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 180 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 225



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 275


>gi|118574789|sp|Q1A1A1.1|FOXG1_CERSI RecName: Full=Forkhead box protein G1; Short=FoxG1
 gi|87622880|gb|ABD38849.1| forkhead box G1 [Ceratotherium simum]
          Length = 486

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 178 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 223



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 224 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 273


>gi|380021495|ref|XP_003694600.1| PREDICTED: fork head domain transcription factor slp1-like [Apis
           florea]
          Length = 427

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP SE   I     + R+R
Sbjct: 155 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRR 204



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI+ A+  + +K+LTL+GIY +I +++PYY    +GWQ
Sbjct: 109 KPPYSYNALIMMAIRQSPEKRLTLNGIYEYIMRHFPYYENNKQGWQ 154


>gi|340372003|ref|XP_003384534.1| PREDICTED: hypothetical protein LOC100637370 [Amphimedon
           queenslandica]
          Length = 329

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 38/47 (80%), Gaps = 1/47 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI-EQAFRR 148
           NS+RHNLSLN +FIK+PRS+ +PGKGSFW+I+P  E+ +  E  F+R
Sbjct: 66  NSVRHNLSLNDFFIKIPRSEGDPGKGSFWKINPEYENVVTNEVEFQR 112



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)

Query: 286 QDD-SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           QD+ +KPP+SY  +I  A+ S+ + ++TL  IY +I  ++ YYR A+  WQ
Sbjct: 15  QDNPAKPPFSYTTIIYLAIRSSKNDKVTLGEIYQWIKDHFMYYRVAESTWQ 65


>gi|354473997|ref|XP_003499218.1| PREDICTED: forkhead box protein G1-like [Cricetulus griseus]
          Length = 364

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 36/52 (69%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + Q    PP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 50  LQQHPGMPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 101



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 102 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 151


>gi|118574787|sp|Q1A1A6.1|FOXG1_CEBCA RecName: Full=Forkhead box protein G1; Short=FoxG1
 gi|87622870|gb|ABD38844.1| forkhead box G1 [Cebus capucinus]
          Length = 489

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 181 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 226



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 227 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 276


>gi|374277724|gb|AEZ03828.1| FoxG, partial [Terebratalia transversa]
          Length = 418

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+ S+ +K+LTL+GIY FI  N+PYYR   +GWQ
Sbjct: 126 KPPFSYNALIMMAIRSSPEKRLTLNGIYEFIMTNFPYYRDNKQGWQ 171



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R     R+   
Sbjct: 172 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRSRLA 231

Query: 163 LSSRCTL-RFP 172
              R  + R P
Sbjct: 232 AFKRAGIPRLP 242


>gi|119913893|ref|XP_001249413.1| PREDICTED: forkhead box protein G1 isoform 1 [Bos taurus]
          Length = 490

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 182 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 227



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 228 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 277


>gi|118574790|sp|Q1A1A3.1|FOXG1_EPOGA RecName: Full=Forkhead box protein G1; Short=FoxG1
 gi|87622876|gb|ABD38847.1| forkhead box G1 [Epomophorus gambianus]
          Length = 485

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 177 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 222



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 223 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 272


>gi|194758647|ref|XP_001961573.1| GF15039 [Drosophila ananassae]
 gi|190615270|gb|EDV30794.1| GF15039 [Drosophila ananassae]
          Length = 470

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 239 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 298

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FP      QF   +     AP+
Sbjct: 299 AFKRSLIGPMFPGLAAYPQFGQFLTYPPTAPS 330



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 40/64 (62%)

Query: 272 AHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTAD 331
           A T   +   +   + + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   
Sbjct: 175 AETKSSDGKPIKDKKGNEKPPYSYNALIMMAIRQSAEKRLTLNGIYEYIMTNHPYYRDNK 234

Query: 332 KGWQ 335
           +GWQ
Sbjct: 235 QGWQ 238


>gi|50345831|ref|NP_055762.3| forkhead box protein J3 isoform 1 [Homo sapiens]
 gi|311893303|ref|NP_001185779.1| forkhead box protein J3 isoform 1 [Homo sapiens]
 gi|311893305|ref|NP_001185780.1| forkhead box protein J3 isoform 1 [Homo sapiens]
 gi|296434510|sp|Q9UPW0.2|FOXJ3_HUMAN RecName: Full=Forkhead box protein J3
 gi|119627567|gb|EAX07162.1| forkhead box J3, isoform CRA_a [Homo sapiens]
 gi|119627568|gb|EAX07163.1| forkhead box J3, isoform CRA_a [Homo sapiens]
 gi|119627569|gb|EAX07164.1| forkhead box J3, isoform CRA_a [Homo sapiens]
 gi|119627570|gb|EAX07165.1| forkhead box J3, isoform CRA_a [Homo sapiens]
 gi|182888139|gb|AAI60166.1| Forkhead box J3 [synthetic construct]
          Length = 622

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +  ++     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|17136668|ref|NP_476834.1| sloppy paired 2 [Drosophila melanogaster]
 gi|7295754|gb|AAF51057.1| sloppy paired 2 [Drosophila melanogaster]
 gi|376319294|gb|AFB18658.1| FI19501p1 [Drosophila melanogaster]
          Length = 451

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FP      QF   +     AP+
Sbjct: 286 AFKRSLIGPMFPGLAAYPQFGQFLTYPPTAPS 317



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 178 NEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 225


>gi|355778496|gb|EHH63532.1| hypothetical protein EGM_16519, partial [Macaca fascicularis]
          Length = 319

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 11  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 56



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 57  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 106


>gi|297694857|ref|XP_002824685.1| PREDICTED: forkhead box protein G1 [Pongo abelii]
          Length = 634

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 326 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 371



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 372 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 421


>gi|390336803|ref|XP_003724430.1| PREDICTED: forkhead box protein J3-like [Strongylocentrotus
           purpuratus]
          Length = 146

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I +N+PYYR A  GW+
Sbjct: 73  DGKPPYSYANLITFAINSSPKKKMTLSEIYQWICENFPYYREAGNGWK 120



 Score = 45.8 bits (107), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 24/25 (96%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGK 127
           NSIRHNLSLN+ F+KVPRS+++PGK
Sbjct: 121 NSIRHNLSLNKCFMKVPRSKDDPGK 145


>gi|170072730|ref|XP_001870245.1| fork head domain transcription factor slp2 [Culex quinquefasciatus]
 gi|167869129|gb|EDS32512.1| fork head domain transcription factor slp2 [Culex quinquefasciatus]
          Length = 401

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I +N+PYYR   +GWQ
Sbjct: 107 NEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMRNFPYYRDNKQGWQ 154



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA 159
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+
Sbjct: 155 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRSTAASRS 211


>gi|242022160|ref|XP_002431509.1| Forkhead box protein E1, putative [Pediculus humanus corporis]
 gi|212516803|gb|EEB18771.1| Forkhead box protein E1, putative [Pediculus humanus corporis]
          Length = 462

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 34/45 (75%)

Query: 291 PPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           PPYSY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 153 PPYSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 197



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 38/57 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA 159
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP SE   I     + R+R     R+
Sbjct: 198 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRRSTAASRS 254


>gi|148704849|gb|EDL36796.1| mCG5477 [Mus musculus]
          Length = 458

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 150 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 195



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 196 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 245


>gi|426243426|ref|XP_004015557.1| PREDICTED: forkhead box protein L1 [Ovis aries]
          Length = 307

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 39/64 (60%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F+KVPR +  PGKGS+W +DP          +RRR+++  PC   P  
Sbjct: 82  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPCPGGPEA 141

Query: 163 LSSR 166
             +R
Sbjct: 142 KRAR 145



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 31/46 (67%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  A ++++TL+GIY FI   +P+Y    +GWQ
Sbjct: 36  KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQ 81


>gi|383861136|ref|XP_003706042.1| PREDICTED: uncharacterized protein LOC100878233 [Megachile
           rotundata]
          Length = 426

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP SE   I     + R+R
Sbjct: 155 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRR 204



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI+ A+  + +K+LTL+GIY +I +++PYY    +GWQ
Sbjct: 109 KPPYSYNALIMMAIRQSPEKRLTLNGIYEYIMRHFPYYENNKQGWQ 154


>gi|195401323|ref|XP_002059263.1| GJ16300 [Drosophila virilis]
 gi|194156137|gb|EDW71321.1| GJ16300 [Drosophila virilis]
          Length = 343

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 18/133 (13%)

Query: 221 PDHPHT------EISSSP-FPSPTGTISAANSCPTSPRGLHNRR---------NVSADLH 264
           P HPH       E+S+S  F SP+ T +  +S   S    HN +         ++  D  
Sbjct: 41  PYHPHPYANSDGELSASEDFDSPSRTSTPMSSAAESLSSQHNDKLDVEEFDDEDIELDGE 100

Query: 265 MAAHYAAAHT-NVVNHMSLSI-SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITK 322
             +  ++ HT N      LS  S D+ KPPYSY  LI+ A+  + +++LTL+GIY ++  
Sbjct: 101 EDSDGSSEHTGNPSKKQKLSAGSNDNKKPPYSYNALIMMAIQDSAEQRLTLNGIYQYLIN 160

Query: 323 NYPYYRTADKGWQ 335
            +PY++   +GWQ
Sbjct: 161 RFPYFKANKRGWQ 173



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F K+PRS ++PGKG++W +DP +E   I +   + R++
Sbjct: 174 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLRRK 223


>gi|47229825|emb|CAG07021.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 125

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 36/50 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQVN 337
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+V+
Sbjct: 62  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKVS 111


>gi|340716210|ref|XP_003396593.1| PREDICTED: hypothetical protein LOC100648711 [Bombus terrestris]
          Length = 491

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +PYYR   +GWQ
Sbjct: 66  KDMVKPPYSYIALIAMAIQNAPDKKITLNGIYQFIMERFPYYRENKQGWQ 115



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDS 150


>gi|311739|emb|CAA50742.1| fkh-2 [Mus musculus]
          Length = 111

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 37/56 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFR 158
           NSIRHNLSLN  F+K+PR    PGKG++W +DP S+      +F RRR+R  P  R
Sbjct: 56  NSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKPTTR 111



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 31/47 (65%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  +  K+LTLSGI +FI+  +PYYR     WQ
Sbjct: 9   AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQ 55


>gi|407924365|gb|EKG17417.1| hypothetical protein MPH_05348 [Macrophomina phaseolina MS6]
          Length = 817

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 38/51 (74%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S  D KPP+SYAQLI QA+ S+ ++QLTL+ IY +I K+Y +YR +  GWQ
Sbjct: 370 SAKDLKPPHSYAQLIGQAIMSSPEEQLTLANIYEYIKKHYAFYRHSGGGWQ 420



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSL+++F KV R  +EPGKG  WR+ P      +++    R+ R
Sbjct: 421 NSIRHNLSLSKHFEKVARRTDEPGKGMKWRLVPEERDNFLKKGIHTRKTR 470


>gi|351712851|gb|EHB15770.1| Forkhead box protein G1 [Heterocephalus glaber]
          Length = 398

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 90  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 135



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 136 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 185


>gi|118601042|ref|NP_001073017.1| forkhead transcription factor J2 [Strongylocentrotus purpuratus]
 gi|82706182|gb|ABB89475.1| forkhead transcription factor J2 [Strongylocentrotus purpuratus]
          Length = 483

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I +N+PYYR A  GW+
Sbjct: 61  DGKPPYSYANLITFAINSSPKKKMTLSEIYQWICENFPYYREAGNGWK 108



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 3/52 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +    ++RR  G+
Sbjct: 109 NSIRHNLSLNKCFMKVPRSKDDPGKGSYWAIDNNPQDDSLR---KKRRHPGM 157


>gi|47209554|emb|CAF89990.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 187

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 26  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYREHKQGWQ 71



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 72  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 121


>gi|196012756|ref|XP_002116240.1| hypothetical protein TRIADDRAFT_30534 [Trichoplax adhaerens]
 gi|190581195|gb|EDV21273.1| hypothetical protein TRIADDRAFT_30534 [Trichoplax adhaerens]
          Length = 122

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)

Query: 283 SISQDDS-KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S ++D++ KP YSY  LI  A+ S HD+++TL+GIY FI  ++PYYR   +GWQ
Sbjct: 14  STTKDNAVKPAYSYIALIAMAIKSKHDRKITLNGIYQFIMDHFPYYRQNKQGWQ 67



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/39 (58%), Positives = 29/39 (74%), Gaps = 2/39 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEE--PGKGSFWRIDPGSEH 139
           NSIRHNLSLN  F+KVPR + E  P KG++W + P SE+
Sbjct: 68  NSIRHNLSLNECFVKVPREEGEKRPKKGNYWTLHPDSEN 106


>gi|332167871|gb|AEE25632.1| forkhead box protein, partial [Lampetra planeri]
          Length = 147

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 19/101 (18%)

Query: 235 SPTGTISAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYS 294
           +P G  SAAN+ P S  GL       +  H A                   +D  KPPYS
Sbjct: 31  APVGMYSAANADPYS-AGLSRHYGPYSHPHQAP------------------KDLVKPPYS 71

Query: 295 YAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           Y  LI  A+ SA DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 72  YIALITMAIQSAPDKKVTLNGIYQFIMDKFPFYRENKQGWQ 112



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 113 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDS 147


>gi|196009069|ref|XP_002114400.1| hypothetical protein TRIADDRAFT_28100 [Trichoplax adhaerens]
 gi|190583419|gb|EDV23490.1| hypothetical protein TRIADDRAFT_28100 [Trichoplax adhaerens]
          Length = 128

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNL+LN  FIK+PR   +PGKG +W +DP SE      +F RRR+R
Sbjct: 77  NSIRHNLTLNDCFIKLPRETNQPGKGHYWALDPSSEGMFDSGSFLRRRKR 126



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ ++ +K+LTL  IY FI K++PYY  + K WQ
Sbjct: 31  KPPYSYIALIAMAIVNSPNKKLTLCDIYQFIAKHFPYYSLSCKSWQ 76


>gi|440905358|gb|ELR55744.1| Forkhead box protein G1, partial [Bos grunniens mutus]
          Length = 327

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 19  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 64



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 65  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 114


>gi|301774126|ref|XP_002922482.1| PREDICTED: forkhead box protein G1-like, partial [Ailuropoda
           melanoleuca]
          Length = 340

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 32  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 77



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 78  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 127


>gi|281337930|gb|EFB13514.1| hypothetical protein PANDA_011464 [Ailuropoda melanoleuca]
          Length = 332

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 24  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 69



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 70  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 119


>gi|350396947|ref|XP_003484717.1| PREDICTED: hypothetical protein LOC100740124 [Bombus impatiens]
          Length = 491

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +PYYR   +GWQ
Sbjct: 66  KDMVKPPYSYIALIAMAIQNAPDKKITLNGIYQFIMERFPYYRENKQGWQ 115



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDS 150


>gi|110758357|ref|XP_001121752.1| PREDICTED: hypothetical protein LOC725966 [Apis mellifera]
          Length = 495

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +PYYR   +GWQ
Sbjct: 66  KDMVKPPYSYIALIAMAIQNAPDKKITLNGIYQFIMERFPYYRENKQGWQ 115



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDS 150


>gi|380018220|ref|XP_003693032.1| PREDICTED: uncharacterized protein LOC100870063 [Apis florea]
          Length = 494

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +PYYR   +GWQ
Sbjct: 66  KDMVKPPYSYIALIAMAIQNAPDKKITLNGIYQFIMERFPYYRENKQGWQ 115



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDS 150


>gi|22759703|dbj|BAC10918.1| winged helix/forkhead transcription factor [Dugesia japonica]
          Length = 455

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIK+PR    PGKG++W +DP SE      +F RRR+R
Sbjct: 197 NSIRHNLSLNDCFIKIPREPGNPGKGNYWTLDPRSEDMFDNGSFLRRRKR 246



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 8/66 (12%)

Query: 278 NHMSLSISQD--------DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT 329
           N   +SI+QD        + KPPYSY  LI  A+  +  ++LTLSGI  FI   +PYY+ 
Sbjct: 131 NENKISINQDRCKSGKSHNVKPPYSYIALITMAILRSPQRKLTLSGICEFIMGRFPYYKD 190

Query: 330 ADKGWQ 335
               WQ
Sbjct: 191 RFPAWQ 196


>gi|340712557|ref|XP_003394823.1| PREDICTED: fork head domain transcription factor slp1-like [Bombus
           terrestris]
          Length = 426

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP SE   I     + R+R
Sbjct: 155 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRR 204



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI+ A+  + +K+LTL+GIY +I +++PYY    +GWQ
Sbjct: 109 KPPYSYNALIMMAIRQSPEKRLTLNGIYEYIMRHFPYYENNKQGWQ 154


>gi|134152688|ref|NP_001077066.1| forkhead box protein C2 [Equus caballus]
 gi|87245345|gb|ABD34840.1| forkhead box protein C2 [Equus caballus]
          Length = 502

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYGAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|194747259|ref|XP_001956070.1| GF25022 [Drosophila ananassae]
 gi|190623352|gb|EDV38876.1| GF25022 [Drosophila ananassae]
          Length = 371

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 8/73 (10%)

Query: 268 HYAAAHTNVVNHMSLSIS-----QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITK 322
           ++ A H N+    SL IS         KPP+SY  LI  A++SA +++LTLSGIY FI  
Sbjct: 67  NFLALHNNI---WSLPISFLHNTHRPEKPPFSYIALIAMAISSAPNQRLTLSGIYKFIMD 123

Query: 323 NYPYYRTADKGWQ 335
            +PYYR   +GWQ
Sbjct: 124 KFPYYRENKQGWQ 136



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+KVPR +      +  GKGS+W +D  S   + EQ 
Sbjct: 137 NSIRHNLSLNDCFVKVPRDKNTIEDNDSAGKGSYWMLD-SSASDMFEQG 184


>gi|426383158|ref|XP_004058155.1| PREDICTED: forkhead box protein C2 [Gorilla gorilla gorilla]
          Length = 445

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|395514446|ref|XP_003761428.1| PREDICTED: forkhead box protein E1 [Sarcophilus harrisii]
          Length = 382

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A A D++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 81  KPPYSYIALIAMAIAHAPDRKLTLGGIYKFITERFPFYRDNPKKWQ 126



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  FIK+PR    PGKG++W +DP +E
Sbjct: 127 NSIRHNLTLNDCFIKIPREPGRPGKGNYWALDPNAE 162


>gi|346324778|gb|EGX94375.1| forkhead box protein L2 [Cordyceps militaris CM01]
          Length = 784

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 39/47 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSL++ FIK+ R +++PGKG++W I+PG+EH+ +++   R+
Sbjct: 279 NSIRHNLSLHKNFIKIERPKDDPGKGNYWGIEPGTEHQFLKEKPPRK 325



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 36/52 (69%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +S D +KPP+SYAQLI  A+  +  ++LTL+ IY +I+ NY +Y   D GWQ
Sbjct: 227 LSDDGTKPPHSYAQLIGMAILRSPMRRLTLAQIYKWISDNYSFYNPNDAGWQ 278


>gi|312377410|gb|EFR24244.1| hypothetical protein AND_11295 [Anopheles darlingi]
          Length = 483

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I +N+PYYR   +GWQ
Sbjct: 137 NEKPPYSYNALIMMAIRQSAEKRLTLNGIYEYIMRNFPYYRDNKQGWQ 184



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 2/73 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 185 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRSTAASRSRLA 244

Query: 163 LSSRCTL--RFPS 173
              R  +   FPS
Sbjct: 245 AFKRSLVGPMFPS 257


>gi|449492502|ref|XP_002197626.2| PREDICTED: uncharacterized protein LOC100230552 [Taeniopygia
           guttata]
          Length = 493

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 73  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQ 122



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKG++W +DP S
Sbjct: 123 NSIRHNLSLNECFVKVPRDDKKPGKGNYWTLDPDS 157


>gi|405963400|gb|EKC28977.1| Forkhead box protein D3-B [Crassostrea gigas]
          Length = 430

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+K+PR    PGKG++W +DP SE      +F RRR+R
Sbjct: 166 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPRSEDMFDNGSFLRRRKR 215



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYYR     WQ
Sbjct: 120 KPPYSYIALITMAILQSSQKRLTLSGICEFIINRFPYYREKFPAWQ 165


>gi|395856865|ref|XP_003800838.1| PREDICTED: forkhead box protein C2 [Otolemur garnettii]
          Length = 498

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 5/87 (5%)

Query: 249 SPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHD 308
           SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A +
Sbjct: 36  SPMGVYSGHPEQYGAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAPE 90

Query: 309 KQLTLSGIYSFITKNYPYYRTADKGWQ 335
           K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 91  KKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|417411978|gb|JAA52406.1| Putative forkhead/hnf-3-related transcription factor, partial
           [Desmodus rotundus]
          Length = 621

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +  ++     ++R R V     P+ 
Sbjct: 123 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLP-TRPKKRARSVERASTPYS 181

Query: 163 LSS 165
           + S
Sbjct: 182 IDS 184



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 75  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 122


>gi|319433896|gb|ADV57817.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433904|gb|ADV57821.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433916|gb|ADV57827.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433918|gb|ADV57828.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433926|gb|ADV57832.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
          Length = 237

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I +N+PYYR   +GWQ
Sbjct: 87  NEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMRNFPYYRDNKQGWQ 134



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA 159
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+
Sbjct: 135 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRSTAASRS 191


>gi|157125013|ref|XP_001654210.1| forkhead protein/ forkhead protein domain [Aedes aegypti]
 gi|108882739|gb|EAT46964.1| AAEL001912-PA [Aedes aegypti]
          Length = 375

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I +N+PYYR   +GWQ
Sbjct: 99  NEKPPYSYNALIMMAIRQSAEKRLTLNGIYEYIMRNFPYYRDNKQGWQ 146



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA 159
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+
Sbjct: 147 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRSTAASRS 203


>gi|240984348|ref|XP_002403995.1| forkhead domain-containing protein, putative [Ixodes scapularis]
 gi|215491471|gb|EEC01112.1| forkhead domain-containing protein, putative [Ixodes scapularis]
          Length = 363

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 40/61 (65%)

Query: 275 NVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGW 334
           N+   + L+ ++   KPPYSY  LI  A+ SA D+++TL+GIY FI  ++P+Y    +GW
Sbjct: 60  NISKSVGLTAAESTIKPPYSYIALIAMAIRSAPDQKITLNGIYKFIMDHFPFYHHNKQGW 119

Query: 335 Q 335
           Q
Sbjct: 120 Q 120



 Score = 45.8 bits (107), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 25/36 (69%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLN  F+K+PR + +P KG +W +    E
Sbjct: 121 NSIRHNLSLNDCFVKLPREKGKPVKGHYWTLGADCE 156


>gi|4885237|ref|NP_005242.1| forkhead box protein C2 [Homo sapiens]
 gi|3024149|sp|Q99958.1|FOXC2_HUMAN RecName: Full=Forkhead box protein C2; AltName:
           Full=Forkhead-related protein FKHL14; AltName:
           Full=Mesenchyme fork head protein 1; Short=MFH-1
           protein; AltName: Full=Transcription factor FKH-14
 gi|1869805|emb|CAA69400.1| Mesenchyme Fork Head-1 [Homo sapiens]
 gi|94963117|gb|AAI11590.1| FOXC2 protein [synthetic construct]
 gi|109731037|gb|AAI13440.1| Forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Homo sapiens]
 gi|109731690|gb|AAI13438.1| Forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Homo sapiens]
 gi|242129237|gb|ACS83751.1| forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Homo sapiens]
          Length = 501

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|516383|emb|CAA52240.1| transcription factor [Homo sapiens]
 gi|967048|emb|CAA55038.1| HBF-G2 (HFK-2) [Homo sapiens]
 gi|1098059|prf||2115219A brain factor 2
          Length = 469

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 162 KPPFSYNALIMMAMRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 207



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 35/49 (71%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ 151
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+
Sbjct: 208 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRR 256


>gi|73956861|ref|XP_860948.1| PREDICTED: forkhead box protein C2 isoform 4 [Canis lupus
           familiaris]
          Length = 505

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYGAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|410297078|gb|JAA27139.1| forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Pan troglodytes]
          Length = 501

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|256082286|ref|XP_002577389.1| forkhead protein/ forkhead protein domain [Schistosoma mansoni]
 gi|350645491|emb|CCD59843.1| forkhead protein/ forkhead protein domain,putative [Schistosoma
           mansoni]
          Length = 1156

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           Q DSKPPYSYA LI  A+ S  +K++TLS IY +I  N+PYY  A  GW+
Sbjct: 57  QPDSKPPYSYASLITCAIQSTSEKKMTLSEIYQWICDNFPYYCEAGSGWK 106



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/29 (75%), Positives = 27/29 (93%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFW 131
           NSIRHNLSLN+ F K+PRS++EPGKGS+W
Sbjct: 107 NSIRHNLSLNKSFTKIPRSRDEPGKGSYW 135


>gi|319433898|gb|ADV57818.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433900|gb|ADV57819.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433902|gb|ADV57820.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433906|gb|ADV57822.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433908|gb|ADV57823.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433910|gb|ADV57824.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433912|gb|ADV57825.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433914|gb|ADV57826.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433920|gb|ADV57829.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433922|gb|ADV57830.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433924|gb|ADV57831.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433928|gb|ADV57833.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433930|gb|ADV57834.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433932|gb|ADV57835.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433934|gb|ADV57836.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433936|gb|ADV57837.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433938|gb|ADV57838.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433940|gb|ADV57839.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433942|gb|ADV57840.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433944|gb|ADV57841.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433946|gb|ADV57842.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433948|gb|ADV57843.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433950|gb|ADV57844.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433952|gb|ADV57845.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433954|gb|ADV57846.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433956|gb|ADV57847.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433958|gb|ADV57848.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433960|gb|ADV57849.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|319433962|gb|ADV57850.1| fork head domain transcription factor slp2, partial [Culex pipiens
           complex sp. YL-2011]
 gi|323371526|gb|ADX59629.1| fork head transcription factor [Culex theileri]
 gi|323371528|gb|ADX59630.1| fork head transcription factor [Culex theileri]
 gi|323371530|gb|ADX59631.1| fork head transcription factor [Culex theileri]
 gi|323371532|gb|ADX59632.1| fork head transcription factor [Culex theileri]
 gi|323371534|gb|ADX59633.1| fork head transcription factor [Culex theileri]
 gi|323371536|gb|ADX59634.1| fork head transcription factor [Culex theileri]
 gi|323371538|gb|ADX59635.1| fork head transcription factor [Culex theileri]
 gi|323371540|gb|ADX59636.1| fork head transcription factor [Culex theileri]
 gi|323371546|gb|ADX59639.1| fork head transcription factor [Culex theileri]
 gi|323371548|gb|ADX59640.1| fork head transcription factor [Culex theileri]
 gi|323371550|gb|ADX59641.1| fork head transcription factor [Culex theileri]
 gi|323371552|gb|ADX59642.1| fork head transcription factor [Culex theileri]
 gi|323371554|gb|ADX59643.1| fork head transcription factor [Culex theileri]
 gi|323371556|gb|ADX59644.1| fork head transcription factor [Culex theileri]
          Length = 237

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I +N+PYYR   +GWQ
Sbjct: 87  NEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMRNFPYYRDNKQGWQ 134



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA 159
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+
Sbjct: 135 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRSTAASRS 191


>gi|194866219|ref|XP_001971815.1| GG15176 [Drosophila erecta]
 gi|190653598|gb|EDV50841.1| GG15176 [Drosophila erecta]
          Length = 364

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY FI   +PYYR   +GWQ
Sbjct: 91  KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQ 136



 Score = 45.4 bits (106), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+K+PR +      +  GKGS+W +D  S   + EQ 
Sbjct: 137 NSIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLD-SSASDMFEQG 184


>gi|312377269|gb|EFR24141.1| hypothetical protein AND_11491 [Anopheles darlingi]
          Length = 550

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY +I  N+PYYR   +GWQ
Sbjct: 77  KPPFSYIALIAMAISSAPNQRLTLSGIYKYIMDNFPYYRENRQGWQ 122


>gi|307175174|gb|EFN65267.1| Fork head domain-containing protein crocodile [Camponotus
           floridanus]
          Length = 490

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +PYYR   +GWQ
Sbjct: 66  KDMVKPPYSYIALIAMAIQNAPDKKITLNGIYQFIMERFPYYRENKQGWQ 115



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/35 (71%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  FIKVPR  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFIKVPRDDKKPGKGSYWSLDPDS 150


>gi|133777149|gb|AAI03887.2| FOXD4 protein [Homo sapiens]
          Length = 395

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+K+PR    PGKG++W +DP S+      +F RRR+R
Sbjct: 149 NSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKR 198



 Score = 51.6 bits (122), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++  +KPP SY  LI  A+  +  K+LTLSGI +FI+  +PYYR     WQ
Sbjct: 98  ARQPAKPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQ 148


>gi|310923326|ref|NP_001185637.1| forkhead box protein C2 [Macaca mulatta]
          Length = 501

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|389639402|ref|XP_003717334.1| forkhead box protein J2 [Magnaporthe oryzae 70-15]
 gi|351643153|gb|EHA51015.1| forkhead box protein J2 [Magnaporthe oryzae 70-15]
 gi|440465382|gb|ELQ34705.1| forkhead box protein J2 [Magnaporthe oryzae Y34]
 gi|440480735|gb|ELQ61385.1| forkhead box protein J2 [Magnaporthe oryzae P131]
          Length = 745

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT-ADKGWQ 335
           KP YSYAQLI QA+ +  D +L LSGIY+FIT+NY YYR+ +  GWQ
Sbjct: 357 KPQYSYAQLITQAIMNTPDGKLNLSGIYNFITQNYSYYRSQSSAGWQ 403



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 32/45 (71%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           NSIRHNLSLN+ F K+ RS +EPGKG  W +   +  ++I+ AF+
Sbjct: 404 NSIRHNLSLNKAFEKIARSTDEPGKGMKWTLVSEAREEMIKNAFK 448


>gi|344241009|gb|EGV97112.1| Forkhead box protein J3 [Cricetulus griseus]
          Length = 606

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 109 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLP-TRSKKRARSVERASTPYS 167

Query: 163 LSS 165
           + S
Sbjct: 168 IDS 170



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 61  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 108


>gi|307557323|gb|ADN52078.1| forkhead-like protein E1 [Macropus eugenii]
          Length = 437

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A A D++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 83  KPPYSYIALIAMAIAHAPDRKLTLGGIYKFITERFPFYRDNPKKWQ 128



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  FIK+PR    PGKG++W +DP +E
Sbjct: 129 NSIRHNLTLNDCFIKIPREPGRPGKGNYWALDPNAE 164


>gi|195491571|ref|XP_002093618.1| GE21395 [Drosophila yakuba]
 gi|194179719|gb|EDW93330.1| GE21395 [Drosophila yakuba]
          Length = 362

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY FI   +PYYR   +GWQ
Sbjct: 91  KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQ 136



 Score = 45.4 bits (106), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+K+PR +      +  GKGS+W +D  S   + EQ 
Sbjct: 137 NSIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLD-SSASDMFEQG 184


>gi|195125317|ref|XP_002007125.1| GI12553 [Drosophila mojavensis]
 gi|193918734|gb|EDW17601.1| GI12553 [Drosophila mojavensis]
          Length = 349

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY FI   +PYYR   +GWQ
Sbjct: 79  KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQ 124



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+KVPR +      +  GKGS+W +D  S   + EQ 
Sbjct: 125 NSIRHNLSLNDCFVKVPRDKNTIEDNDSAGKGSYWMLD-ASATDMFEQG 172


>gi|167987441|gb|ACA13392.1| forkhead box l1, partial [Scyliorhinus canicula]
          Length = 387

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPC 156
           NSIRHNLSLN  FIKVPR + +PGKGS+W +DP     + E    RRR+R   C
Sbjct: 140 NSIRHNLSLNDCFIKVPREKGKPGKGSYWTLDPRCTD-MFENGNYRRRKRKAKC 192



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 32/46 (69%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ S  D+++TL+GIY FI + +P+Y    +GWQ
Sbjct: 94  KPPYSYIALIAMAIKSVPDQRVTLNGIYQFIMERFPFYHDNKQGWQ 139


>gi|126334138|ref|XP_001372714.1| PREDICTED: forkhead box protein E1-like [Monodelphis domestica]
          Length = 435

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A A D++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 82  KPPYSYIALIAMAIAHAPDRKLTLGGIYKFITERFPFYRDNPKKWQ 127



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  FIK+PR    PGKG++W +DP +E
Sbjct: 128 NSIRHNLTLNDCFIKIPREPGRPGKGNYWALDPNAE 163


>gi|195428641|ref|XP_002062380.1| GK17509 [Drosophila willistoni]
 gi|194158465|gb|EDW73366.1| GK17509 [Drosophila willistoni]
          Length = 413

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY FI   +PYYR   +GWQ
Sbjct: 105 KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQ 150



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+KV R +      +  GKGS+W +D  S   + EQ 
Sbjct: 151 NSIRHNLSLNDCFVKVARDKNTIDDNDSAGKGSYWMLD-SSASDMFEQG 198


>gi|307557325|gb|ADN52079.1| forkhead-like protein E1 [Tachyglossus aculeatus]
          Length = 337

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A A D++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 36  KPPYSYIALIAMAIAHAPDRKLTLGGIYKFITERFPFYRDNPKKWQ 81



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 29/37 (78%), Gaps = 1/37 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQE-EPGKGSFWRIDPGSE 138
           NSIRHNL+LN  FIK+PR +   PGKG++W +DP +E
Sbjct: 82  NSIRHNLTLNDCFIKIPREEPGRPGKGNYWALDPHAE 118


>gi|284018088|sp|Q9PVY8.2|FXC2B_XENLA RecName: Full=Forkhead box protein C2-B; Short=FoxC2-B;
           Short=FoxC2b; AltName: Full=Fork head domain-related
           protein 4'; Short=FD-4'; Short=xFD-4'; Short=xFD4 B
 gi|213625257|gb|AAI70193.1| FD-4' protein [Xenopus laevis]
 gi|213626827|gb|AAI70195.1| FD-4' protein [Xenopus laevis]
          Length = 461

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 5/71 (7%)

Query: 265 MAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
           MA  Y   H     H   +  +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +
Sbjct: 52  MARSYGPYH-----HHQQAAPKDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRF 106

Query: 325 PYYRTADKGWQ 335
           P+YR   +GWQ
Sbjct: 107 PFYRENKQGWQ 117



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDS 152


>gi|22759701|dbj|BAC10917.1| winged helix/forkhead transcription factor [Dugesia japonica]
          Length = 260

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+ S+  K+LTL+GIY FI +N+PYY+   +GWQ
Sbjct: 45  KPPFSYNALIMMAIRSSDQKRLTLNGIYEFIMRNFPYYKNNKQGWQ 90



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 51/103 (49%), Gaps = 25/103 (24%)

Query: 50  QKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNL 109
           QKR+T+             G+  FI R          NF    N K G     NSIRHNL
Sbjct: 63  QKRLTLN------------GIYEFIMR----------NFPYYKNNKQGW---QNSIRHNL 97

Query: 110 SLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           SLN+ FIKVPR  ++PGKG++W +DP  E   I     + R+R
Sbjct: 98  SLNKCFIKVPRGYDDPGKGNYWMVDPACEDVYIGGTTGKLRRR 140


>gi|380018469|ref|XP_003693150.1| PREDICTED: uncharacterized protein LOC100866104 [Apis florea]
          Length = 488

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 30/119 (25%)

Query: 247 PTSPRGLHNRRNVSADLHMAAHYA--AAHTNVVN-----HMSLSISQDD----------- 288
           P++PRG   +    ++LH+    A   +H+N V       M+ ++SQD            
Sbjct: 8   PSTPRGSAMKNETESNLHLQDQSATSVSHSNSVVPRANLTMANALSQDQGLDSLMCSQTS 67

Query: 289 ------------SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
                        KPPYSY  LIV A+ S+ +K+LTLS IYSF+ +++P++R A +GW+
Sbjct: 68  GELPRKPGARRQEKPPYSYIALIVMAIQSSREKRLTLSEIYSFLQQHFPFFRGAYQGWK 126



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 29/41 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIE 143
           NS+RHNLSLN  FIK+P+    PGKG +W IDP +E+   E
Sbjct: 127 NSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPSTEYMFEE 167


>gi|148226787|ref|NP_001083920.1| forkhead box protein C2-B [Xenopus laevis]
 gi|5824331|emb|CAB54144.1| FD-4' protein [Xenopus laevis]
          Length = 461

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 5/71 (7%)

Query: 265 MAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
           MA  Y   H     H   +  +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +
Sbjct: 52  MARSYGPYH-----HHQQAAPKDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRF 106

Query: 325 PYYRTADKGWQ 335
           P+YR   +GWQ
Sbjct: 107 PFYRENKQGWQ 117



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDS 152


>gi|17975526|ref|NP_523912.1| forkhead domain 64A, isoform A [Drosophila melanogaster]
 gi|386770532|ref|NP_001246609.1| forkhead domain 64A, isoform B [Drosophila melanogaster]
 gi|13124729|sp|Q02360.2|FD2_DROME RecName: Full=Fork head domain-containing protein FD2
 gi|7292417|gb|AAF47821.1| forkhead domain 64A, isoform A [Drosophila melanogaster]
 gi|289666817|gb|ADD16463.1| RT06062p [Drosophila melanogaster]
 gi|383291739|gb|AFH04280.1| forkhead domain 64A, isoform B [Drosophila melanogaster]
          Length = 365

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY FI   +PYYR   +GWQ
Sbjct: 91  KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQ 136



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+K+PR +      +  GKGS+W +D  S   + EQ 
Sbjct: 137 NSIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLD-SSASDMFEQG 184


>gi|295660822|ref|XP_002790967.1| forkhead box protein C2 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226281219|gb|EEH36785.1| forkhead box protein C2 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 718

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 36/51 (70%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S  D KPPYSYA +I QA+ S  +++LTLS IY++IT+ Y +YR    GWQ
Sbjct: 353 SAKDLKPPYSYATMIAQAIFSTKEEKLTLSNIYAYITEKYAFYRHTSSGWQ 403



 Score = 43.1 bits (100), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 21/97 (21%)

Query: 31  KSGTAIAKLQGREFEYMVRQKRITIGRNSSRG------------------DVDVNMGLSS 72
           +S  A AK+ GR++ Y ++   I IGR   R                   +V +++G S 
Sbjct: 110 ESVKAYAKIAGRDWTYYMKGLHINIGRPPDRDQRIDAQSSPVAVAAQAMPEVHIDLGPSK 169

Query: 73  FISRRHIEIFF--EHPN-FFMTCNGKNGVFVDGNSIR 106
           F+SR H EI +  E P+ + +  NG+NG+ ++ + I+
Sbjct: 170 FVSRLHAEILYNSEEPSGWHIRVNGRNGIRLNTHIIK 206


>gi|354479361|ref|XP_003501880.1| PREDICTED: forkhead box protein J3-like [Cricetulus griseus]
          Length = 613

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 116 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLP-TRSKKRARSVERASTPYS 174

Query: 163 LSS 165
           + S
Sbjct: 175 IDS 177



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 68  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 115


>gi|407922736|gb|EKG15831.1| Transcription factor fork head [Macrophomina phaseolina MS6]
          Length = 737

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 38/55 (69%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCF 157
           NSIRHNLSLN+ FIK  R +++PGKG++W I+PG E + +++  RR    G P  
Sbjct: 248 NSIRHNLSLNKAFIKQERPKDDPGKGNYWAIEPGFERQFMKEKPRRMTNPGDPSL 302



 Score = 54.3 bits (129), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           I  D +KP YSYA LI  A+  A  ++LTL+ IY +I++ + YYR  + GWQ
Sbjct: 196 IEDDGNKPAYSYATLIGMAILRAPQRRLTLAQIYKWISETFSYYRAGETGWQ 247


>gi|226289162|gb|EEH44674.1| forkhead box protein C2 [Paracoccidioides brasiliensis Pb18]
          Length = 742

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 36/51 (70%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S  D KPPYSYA +I QA+ S  +++LTLS IY++IT+ Y +YR    GWQ
Sbjct: 353 SAKDLKPPYSYATMIAQAIFSTKEEKLTLSNIYAYITEKYAFYRHTSSGWQ 403



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/33 (69%), Positives = 26/33 (78%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP 135
           NSIRHNLSLN+ F KVPR  +EPGKG  W+I P
Sbjct: 404 NSIRHNLSLNKAFQKVPRRTDEPGKGMKWQIAP 436



 Score = 42.7 bits (99), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 21/97 (21%)

Query: 31  KSGTAIAKLQGREFEYMVRQKRITIGRNSSRG------------------DVDVNMGLSS 72
           +S  A AK+ GR++ Y ++   I IGR   R                   +V +++G S 
Sbjct: 110 ESVKAYAKIAGRDWTYYMKGLHINIGRPPDRDQRIDAQSSPVAVAAQAMPEVHIDLGPSK 169

Query: 73  FISRRHIEIFF--EHPN-FFMTCNGKNGVFVDGNSIR 106
           F+SR H EI +  E P+ + +  NG+NG+ ++ + I+
Sbjct: 170 FVSRLHAEILYNSEEPSGWHIRVNGRNGIRLNTHIIK 206


>gi|158299896|ref|XP_319908.4| AGAP009147-PA [Anopheles gambiae str. PEST]
 gi|157013738|gb|EAA43390.4| AGAP009147-PA [Anopheles gambiae str. PEST]
          Length = 268

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I +N+PYYR   +GWQ
Sbjct: 102 NEKPPYSYNALIMMAIRQSAEKRLTLNGIYEYIMRNFPYYRDNKQGWQ 149



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA 159
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+
Sbjct: 150 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRSTAASRS 206


>gi|18478831|gb|AAL73341.1| FOXD4a [Homo sapiens]
          Length = 439

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLSLN  F+K+PR    PGKG++W +DP S+      +F RRR+R
Sbjct: 150 NSVRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKR 199



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++  +KPP SY  LI  A+  +  K+LTLSGI +FI+  +PYYR     WQ
Sbjct: 99  ARQPAKPPSSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQ 149


>gi|395736634|ref|XP_002816393.2| PREDICTED: uncharacterized protein LOC100443984 [Pongo abelii]
          Length = 662

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 167


>gi|350399880|ref|XP_003485669.1| PREDICTED: fork head domain transcription factor slp2-like [Bombus
           impatiens]
          Length = 376

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP SE   I     + R+R
Sbjct: 156 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEDVFIGGTTGKLRRR 205



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 12/73 (16%)

Query: 275 NVVNHMSLSISQDDSK------------PPYSYAQLIVQAVASAHDKQLTLSGIYSFITK 322
           N VN  + S  Q DSK            PPYSY  LI+ A+  + +K+LTL+GIY +I +
Sbjct: 83  NAVNSAANSSEQKDSKDRQTDDKKKCEKPPYSYNALIMMAIRQSPEKRLTLNGIYEYIMR 142

Query: 323 NYPYYRTADKGWQ 335
           ++PYY    +GWQ
Sbjct: 143 HFPYYENNKQGWQ 155


>gi|147903125|ref|NP_001081076.1| forkhead box protein A4-B [Xenopus laevis]
 gi|462101|sp|P33206.1|FXA4B_XENLA RecName: Full=Forkhead box protein A4-B; Short=FoxA4-B;
           Short=FoxA4b; AltName: Full=Fork head domain-related
           protein 1'; Short=FKH-1; Short=Forkhead protein 1;
           Short=xFD-1'; Short=xFKH1
 gi|248475|gb|AAB22027.1| fork head domain protein [Xenopus laevis]
 gi|1655903|gb|AAD03481.1| XFD-1' [Xenopus laevis]
 gi|52138915|gb|AAH82641.1| Fkh1-A protein [Xenopus laevis]
          Length = 400

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRH+LS N  FIKVPRS E+PGKGS+W + P S + + E     RRQ+   C R+  G
Sbjct: 165 NSIRHSLSFNDCFIKVPRSPEKPGKGSYWTLHPESGN-MFENGCYLRRQKRFKCERSKSG 223

Query: 163 LSSR 166
              R
Sbjct: 224 EGER 227



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  A +K +TL+ IY +I   +PYYR   + WQ
Sbjct: 118 AKPPYSYISLITMAIQQAPNKMMTLNEIYQWIVDLFPYYRQNQQRWQ 164


>gi|195337287|ref|XP_002035260.1| GM14607 [Drosophila sechellia]
 gi|194128353|gb|EDW50396.1| GM14607 [Drosophila sechellia]
          Length = 368

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY FI   +PYYR   +GWQ
Sbjct: 91  KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQ 136



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+K+PR +      +  GKGS+W +D  S   + EQ 
Sbjct: 137 NSIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLD-SSASDMFEQG 184


>gi|299773490|gb|ADJ38819.1| Foxl2-like protein [Salmo salar]
          Length = 294

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 39/70 (55%)

Query: 266 AAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYP 325
           +A   A+   VV+    +      KPPYSY  LI  A+  + +K+LTLSGIY FI   +P
Sbjct: 28  SAESTASAAEVVDETGKARVGQTEKPPYSYVALIAMAIKESREKRLTLSGIYQFIISTFP 87

Query: 326 YYRTADKGWQ 335
           YY    KGWQ
Sbjct: 88  YYEKNKKGWQ 97



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 24/34 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPG 136
           NSIRHNLSLN  F+KVPR      KG+FW +DP 
Sbjct: 98  NSIRHNLSLNECFLKVPREGGGDRKGNFWILDPA 131


>gi|301614509|ref|XP_002936729.1| PREDICTED: forkhead box protein E1 [Xenopus (Silurana) tropicalis]
          Length = 377

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A++ D++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 66  KPPYSYIALIAMAIANSTDRKLTLGGIYKFITERFPFYRDNSKKWQ 111



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  FIK+PR    PGKG++W +DP +E
Sbjct: 112 NSIRHNLTLNDCFIKIPREPGRPGKGNYWALDPNAE 147


>gi|195170749|ref|XP_002026174.1| GL16060 [Drosophila persimilis]
 gi|194111054|gb|EDW33097.1| GL16060 [Drosophila persimilis]
          Length = 369

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY FI   +PYYR   +GWQ
Sbjct: 78  KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRDNKQGWQ 123



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+KVPR +      +  GKGS+W +D  S   + EQ 
Sbjct: 124 NSIRHNLSLNDCFVKVPRDKNTIDDNDSAGKGSYWMLD-ASASDMFEQG 171


>gi|313237505|emb|CBY19946.1| unnamed protein product [Oikopleura dioica]
          Length = 236

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ S  D+++TLSGIY FI+  +PYYR   +GWQ
Sbjct: 3   KPPYSYIALISMAINSKKDRRITLSGIYKFISDKFPYYRDTKQGWQ 48



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIK  R  ++ GKGSFW +DP + +     ++ RRR+R
Sbjct: 49  NSIRHNLSLNECFIKEARIDKKRGKGSFWTLDPDAFNMFENGSYLRRRRR 98


>gi|157107733|ref|XP_001649914.1| hypothetical protein AaeL_AAEL004840 [Aedes aegypti]
 gi|108879526|gb|EAT43751.1| AAEL004840-PA [Aedes aegypti]
          Length = 141

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 254 HNRRNVSADLHMAAHYAAAHTNVVNHMSLSIS-----QDDSKPPYSYAQLIVQAVASAHD 308
            N R    D   +A +A +    +N  SL  S         KPP+SY  LI  A++SA +
Sbjct: 26  QNGRYFPMDASGSAGFAGSAYFGLNQWSLPFSFLKAAHRPEKPPFSYIALIAMAISSAPN 85

Query: 309 KQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++LTLSGIY +I  N+PYYR   +GWQ
Sbjct: 86  QRLTLSGIYKYIMDNFPYYRENKQGWQ 112


>gi|432924564|ref|XP_004080620.1| PREDICTED: forkhead box protein I2-A-like [Oryzias latipes]
          Length = 380

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R +++PGKG++W +DP  E       FRR+R+R
Sbjct: 245 NSIRHNLSLNDCFKKVARDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 294



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ ++ DK+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 199 RPPYSYSALIAMAIQNSQDKKLTLSQIYQYVADNFPFYKKSKAGWQ 244


>gi|323371542|gb|ADX59637.1| fork head transcription factor [Culex theileri]
 gi|323371544|gb|ADX59638.1| fork head transcription factor [Culex theileri]
          Length = 218

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 36/48 (75%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I +N+PYYR   +GWQ
Sbjct: 68  NEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMRNFPYYRDNKQGWQ 115



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA 159
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+
Sbjct: 116 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRSTAASRS 172


>gi|322800175|gb|EFZ21260.1| hypothetical protein SINV_05156 [Solenopsis invicta]
          Length = 534

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 5/102 (4%)

Query: 235 SPTGTI-SAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPY 293
           SP G + S  NS P++P    +   V+A    A   A    N +N  S   S  +SKPPY
Sbjct: 139 SPVGALHSTTNSNPSTPSA-PSTPTVAATDSTATAVATGTNNGINGGS---SATNSKPPY 194

Query: 294 SYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SY  LI  A+  +  K+ TLS IY++IT  +PY+    KGWQ
Sbjct: 195 SYVALIAMAIQDSKHKRATLSEIYAYITAKFPYFEKNKKGWQ 236



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 25/36 (69%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLN  F+KVPR      KG+FW +DP  E
Sbjct: 237 NSIRHNLSLNECFVKVPREGGGERKGNFWTLDPQYE 272


>gi|270010909|gb|EFA07357.1| hypothetical protein TcasGA2_TC015957 [Tribolium castaneum]
          Length = 271

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIK+PR    PGKG++W +DP +E      +F RRR+R
Sbjct: 84  NSIRHNLSLNDCFIKIPREPGNPGKGNYWTLDPLAEDMFDNGSFLRRRKR 133



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 27/46 (58%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   + YYR     WQ
Sbjct: 38  KPPYSYIALITMAILQSPQKKLTLSGICEFIMTRFQYYREKFPAWQ 83


>gi|344292812|ref|XP_003418119.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein C2-like
           [Loxodonta africana]
          Length = 499

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYGAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|47497986|ref|NP_998857.1| forkhead box protein C2 [Xenopus (Silurana) tropicalis]
 gi|45709775|gb|AAH67916.1| forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Xenopus (Silurana)
           tropicalis]
 gi|89269875|emb|CAJ83766.1| forkhead box C2 (MFH-1, mesenchyme forkhead 1) [Xenopus (Silurana)
           tropicalis]
          Length = 463

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 5/71 (7%)

Query: 265 MAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
           MA  Y   H     H   +  +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +
Sbjct: 51  MARSYGPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRF 105

Query: 325 PYYRTADKGWQ 335
           P+YR   +GWQ
Sbjct: 106 PFYRENKQGWQ 116



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 160


>gi|195587610|ref|XP_002083554.1| GD13797 [Drosophila simulans]
 gi|194195563|gb|EDX09139.1| GD13797 [Drosophila simulans]
          Length = 368

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY FI   +PYYR   +GWQ
Sbjct: 91  KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQ 136



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+K+PR +      +  GKGS+W +D  S   + EQ 
Sbjct: 137 NSIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLD-SSASDMFEQG 184


>gi|269785233|ref|NP_001161544.1| forkhead box L1 transcription factor [Saccoglossus kowalevskii]
 gi|268054073|gb|ACY92523.1| forkhead box L1 transcription factor [Saccoglossus kowalevskii]
          Length = 498

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KVPR + +PGKG++W + P  E       FRRR++R
Sbjct: 101 NSIRHNLSLNDCFVKVPREKGKPGKGNYWSLAPDCEEMFENGNFRRRKRR 150



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 34/54 (62%)

Query: 282 LSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           L   +   KPPYSY  LI  A+ SA D++ TL+GIY FI + +PYY    +GWQ
Sbjct: 47  LERREQPQKPPYSYIALIAMAIRSAPDQKTTLNGIYQFIMERFPYYHDNKQGWQ 100


>gi|1245782|gb|AAB35525.1| XFKH4=fork head gene product {forkhead domain, internal fragment}
           [Xenopus, gastrula/early neurula, Peptide Partial, 62
           aa]
          Length = 62

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 1   KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 46


>gi|115502200|sp|Q6NVT7.2|FOXC2_XENTR RecName: Full=Forkhead box protein C2; Short=FoxC2
          Length = 464

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 5/71 (7%)

Query: 265 MAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNY 324
           MA  Y   H     H   +  +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +
Sbjct: 52  MARSYGPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRF 106

Query: 325 PYYRTADKGWQ 335
           P+YR   +GWQ
Sbjct: 107 PFYRENKQGWQ 117



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|125976788|ref|XP_001352427.1| GA10915 [Drosophila pseudoobscura pseudoobscura]
 gi|54641173|gb|EAL29923.1| GA10915 [Drosophila pseudoobscura pseudoobscura]
          Length = 377

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY FI   +PYYR   +GWQ
Sbjct: 86  KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRDNKQGWQ 131



 Score = 47.4 bits (111), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+KVPR +      +  GKGS+W +D  S   + EQ 
Sbjct: 132 NSIRHNLSLNDCFVKVPRDKNTIDDNDSAGKGSYWMLD-ASASDMFEQG 179


>gi|332030764|gb|EGI70440.1| Forkhead box protein J1-B [Acromyrmex echinatior]
          Length = 309

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 4/52 (7%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           NSIRHNLSLN+ F+K+PRS++EPGKG FW++D     + +E+  R RR+  +
Sbjct: 152 NSIRHNLSLNKCFLKLPRSKDEPGKGGFWKLD----LERMEEGKRSRRRSAI 199



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 36/48 (75%), Gaps = 1/48 (2%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D+KPP+SYA +I  A+  A++ +++LS IY++I +N+ +Y+ AD  WQ
Sbjct: 105 DAKPPFSYATIICLAM-RANNNKVSLSNIYAWIRENFLFYKYADPAWQ 151


>gi|296231742|ref|XP_002761282.1| PREDICTED: forkhead box protein C2 [Callithrix jacchus]
          Length = 501

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYGAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|270006435|gb|EFA02883.1| sloppy paired 1 [Tribolium castaneum]
          Length = 208

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 38/51 (74%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S+   KPPYSY  LI+ A+ ++ +K+LTL+GIY +I +N+PYY+   +GWQ
Sbjct: 17  SKPTEKPPYSYNALIMMAIRNSPEKRLTLNGIYEYIIRNFPYYKENKQGWQ 67



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R
Sbjct: 68  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGTSTGKLRRR 117


>gi|402909237|ref|XP_003917329.1| PREDICTED: forkhead box protein C2 [Papio anubis]
          Length = 447

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|322786614|gb|EFZ13009.1| hypothetical protein SINV_12552 [Solenopsis invicta]
          Length = 499

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +PYYR   +GWQ
Sbjct: 65  KDMVKPPYSYIALIAMAIQNAPDKKITLNGIYQFIMDRFPYYRENKQGWQ 114



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 115 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDS 149


>gi|195402990|ref|XP_002060079.1| GJ15456 [Drosophila virilis]
 gi|194141877|gb|EDW58290.1| GJ15456 [Drosophila virilis]
          Length = 348

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY FI   +PYYR   +GWQ
Sbjct: 85  KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQ 130



 Score = 46.6 bits (109), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+K+PR +      +  GKGS+W +D  S   + EQ 
Sbjct: 131 NSIRHNLSLNDCFVKIPRDKNTIDDNDSAGKGSYWMLD-ASATDMFEQG 178


>gi|8621|emb|CAA46892.1| slp2 protein [Drosophila melanogaster]
          Length = 445

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FP      QF   +     AP+
Sbjct: 286 AFKRSLIGPMFPGLAAYPQFGQFLTYPPTAPS 317



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 178 NEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 225


>gi|395748185|ref|XP_003778723.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein C2 [Pongo
           abelii]
          Length = 501

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|322366528|gb|ADW95338.1| FoxG [Paracentrotus lividus]
          Length = 509

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 15/79 (18%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI---EQAFRRRR--------- 150
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I       RRR          
Sbjct: 235 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRTTAASRNHRL 294

Query: 151 ---QRGVPCFRAPFGLSSR 166
              +RGVP  R  F    R
Sbjct: 295 AQLKRGVPYMRGGFPFQLR 313



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 35/47 (74%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            KPP+SY  LI+ A+ S+ +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 188 EKPPFSYNALIMMAIRSSPEKRLTLNGIYEYIMTNFPYYRENKQGWQ 234


>gi|383853178|ref|XP_003702100.1| PREDICTED: uncharacterized protein LOC100879032 [Megachile
           rotundata]
          Length = 489

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+  A DK++TL+GIY FI + +PYYR   +GWQ
Sbjct: 66  KDMVKPPYSYIALIAMAIQHAPDKKITLNGIYQFIMERFPYYRENKQGWQ 115



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDS 150


>gi|322794486|gb|EFZ17539.1| hypothetical protein SINV_01156 [Solenopsis invicta]
          Length = 310

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 11/68 (16%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+K+PRS++EPGKG FW++D     + +E+  R RR       R+ F 
Sbjct: 151 NSIRHNLSLNKCFVKLPRSKDEPGKGGFWKLD----LERMEEGKRSRR-------RSAFS 199

Query: 163 LSSRCTLR 170
             +R T R
Sbjct: 200 QRTRGTKR 207



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 270 AAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRT 329
           A A  ++  +     +  D+KPP+SYA +I  A+  A++ +++LS IY++I +N+ +Y+ 
Sbjct: 86  AKAELDLAENADKYRTDPDAKPPFSYATIICLAM-RANNNKVSLSNIYAWIRENFLFYKY 144

Query: 330 ADKGWQ 335
           AD  WQ
Sbjct: 145 ADPAWQ 150


>gi|242019799|ref|XP_002430346.1| Forkhead box protein C2, putative [Pediculus humanus corporis]
 gi|212515470|gb|EEB17608.1| Forkhead box protein C2, putative [Pediculus humanus corporis]
          Length = 171

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A++SA  K++TLSGIY FI   +PYYR   +GWQ
Sbjct: 63  KPPYSYIALIAMAISSAPGKKITLSGIYRFIMDRFPYYRENKQGWQ 108



 Score = 46.6 bits (109), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 28/37 (75%), Gaps = 2/37 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ--EEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+K+PR++     GKGS+W + PG+
Sbjct: 109 NSIRHNLSLNDCFVKIPRNKSCSSGGKGSYWTLGPGA 145


>gi|148227814|ref|NP_001089846.1| forkhead box protein C1-B [Xenopus laevis]
 gi|123913511|sp|Q32NP8.1|FXC1B_XENLA RecName: Full=Forkhead box protein C1-B
 gi|80478512|gb|AAI08536.1| MGC130988 protein [Xenopus laevis]
          Length = 495

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 75  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQ 124



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 168


>gi|327286761|ref|XP_003228098.1| PREDICTED: forkhead box protein G1-like [Anolis carolinensis]
          Length = 333

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 27/104 (25%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP SE  +                    G
Sbjct: 114 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSEEDVFIG-----------------G 156

Query: 163 LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGN 206
            + +   R PS+  +L F+           GQ +SS+GV + G+
Sbjct: 157 ATGKLRRRSPSSQAKLAFR----------RGQRLSSAGVTLSGS 190



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPP+SY  LI+ A+  +  K+LTL+GIY FI +++PYY+   +GWQ
Sbjct: 66  EEKPPFSYNALIMMAIRQSPGKRLTLNGIYEFIMRSFPYYKENKQGWQ 113


>gi|169145931|emb|CAQ13817.1| novel protein similar to vertebrate forkhead box transcription
           factor [Danio rerio]
          Length = 379

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R     RA   
Sbjct: 136 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRAKLA 195

Query: 163 LSSRCTLRFPSTNIRLQF 180
           +     L   + +  L F
Sbjct: 196 MKRGARLSSTAASAGLAF 213



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +++LTL+GIY FI  N+PYYR   +GWQ
Sbjct: 90  KPPFSYNALIMMAIRQSPERRLTLNGIYEFIMGNFPYYRENRQGWQ 135


>gi|431838543|gb|ELK00475.1| Forkhead box protein C2 [Pteropus alecto]
          Length = 321

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYGAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|397500517|ref|XP_003820957.1| PREDICTED: forkhead box protein C2 [Pan paniscus]
          Length = 408

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|351696382|gb|EHA99300.1| Forkhead box protein J3 [Heterocephalus glaber]
          Length = 607

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 109 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 167

Query: 163 LSS 165
           + S
Sbjct: 168 IDS 170



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 61  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 108


>gi|332016884|gb|EGI57693.1| Fork head domain-containing protein crocodile [Acromyrmex
           echinatior]
          Length = 495

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +PYYR   +GWQ
Sbjct: 65  KDMVKPPYSYIALIAMAIQNAPDKKITLNGIYQFIMDRFPYYRENKQGWQ 114



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 115 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDS 149


>gi|113680631|ref|NP_001038680.1| forkhead box G1c [Danio rerio]
          Length = 379

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R     RA   
Sbjct: 136 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRAKLA 195

Query: 163 LSSRCTLRFPSTNIRLQF 180
           +     L   + +  L F
Sbjct: 196 MKRGARLSSTAASAGLAF 213



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +++LTL+GIY FI  N+PYYR   +GWQ
Sbjct: 90  KPPFSYNALIMMAIRQSPERRLTLNGIYEFIMGNFPYYRENRQGWQ 135


>gi|403291975|ref|XP_003937035.1| PREDICTED: forkhead box protein J3 isoform 3 [Saimiri boliviensis
           boliviensis]
          Length = 640

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 142 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 200

Query: 163 LSS 165
           + S
Sbjct: 201 IDS 203



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 94  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 141


>gi|328698695|ref|XP_003240706.1| PREDICTED: forkhead box protein J2-like isoform 1 [Acyrthosiphon
           pisum]
 gi|328698697|ref|XP_003240707.1| PREDICTED: forkhead box protein J2-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 310

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 30/32 (93%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN++F+KVPRS++EPGKG FW+ D
Sbjct: 130 NSIRHNLSLNKFFVKVPRSKDEPGKGGFWKFD 161



 Score = 50.8 bits (120), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPP+SY+ LI  A+ +  +K +TLS IY +I +N+ YYR AD  W+
Sbjct: 83  DKKPPFSYSTLICMAMKAKGNK-VTLSSIYGWIRENFLYYRNADPSWK 129


>gi|293343411|ref|XP_001079078.2| PREDICTED: forkhead box protein L1-like [Rattus norvegicus]
 gi|392355072|ref|XP_003751934.1| PREDICTED: forkhead box protein L1-like [Rattus norvegicus]
 gi|149038357|gb|EDL92717.1| rCG51404 [Rattus norvegicus]
          Length = 341

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 40/68 (58%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F+KVPR +  PGKGS+W +DP          +RRR+++  P   +P  
Sbjct: 95  NSIRHNLSLNECFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAAGSPEA 154

Query: 163 LSSRCTLR 170
             +R   R
Sbjct: 155 KRTRVEPR 162



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 31/46 (67%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  A ++++TL+GIY FI   +P+Y    +GWQ
Sbjct: 49  KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQ 94


>gi|213625060|gb|AAI69731.1| Winged helix transcription factor XFD-11 [Xenopus laevis]
          Length = 492

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 75  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQ 124



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 31/44 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGK S+W +DP S +     +F
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKVSYWTLDPDSYNMFENGSF 168


>gi|45361699|ref|NP_989423.1| forkhead box protein A2 [Xenopus (Silurana) tropicalis]
 gi|82240431|sp|Q7T1R4.1|FOXA2_XENTR RecName: Full=Forkhead box protein A2; Short=FoxA2
 gi|32442470|gb|AAP82293.1| fork head transcription factor FoxA2 [Xenopus (Silurana)
           tropicalis]
 gi|89271896|emb|CAJ82886.1| forkhead box A2 [Xenopus (Silurana) tropicalis]
 gi|213624184|gb|AAI70757.1| forkhead box A2 [Xenopus (Silurana) tropicalis]
 gi|213627438|gb|AAI71324.1| forkhead box A2 [Xenopus (Silurana) tropicalis]
          Length = 434

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAP 160
           NSIRH+LS N  F+KVPRS ++PGKGSFW + P S + + E     RRQ+   C + P
Sbjct: 195 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGN-MFENGCYLRRQKRFKCEKKP 251



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  + +K LTLS IY +I   +P+YR   + WQ
Sbjct: 148 AKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQ 194


>gi|328708286|ref|XP_003243644.1| PREDICTED: hypothetical protein LOC100573152 [Acyrthosiphon pisum]
          Length = 422

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK+ TL+GIY FI + +PYYR   +GWQ
Sbjct: 64  KDMVKPPYSYIALIAMAIQNASDKRCTLNGIYQFIMERFPYYRENKQGWQ 113



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+K PR  ++PGKGS+W +DP S
Sbjct: 114 NSIRHNLSLNECFVKQPRDDKKPGKGSYWTLDPDS 148


>gi|327279416|ref|XP_003224452.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein C1-like
           [Anolis carolinensis]
          Length = 546

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 73  KDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQ 122



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 123 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 166


>gi|148234012|ref|NP_001080937.1| winged helix transcription factor XFD-11 [Xenopus laevis]
 gi|4092785|gb|AAC99469.1| winged helix transcription factor XFD-11 [Xenopus laevis]
          Length = 492

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 75  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQ 124



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 168


>gi|213623772|gb|AAI70199.1| Winged helix transcription factor XFD-11 [Xenopus laevis]
          Length = 492

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 75  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQ 124



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 168


>gi|157818473|ref|NP_001101441.1| forkhead box protein J3 [Rattus norvegicus]
 gi|149035427|gb|EDL90108.1| forkhead box J3 (predicted) [Rattus norvegicus]
          Length = 622

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|291230502|ref|XP_002735197.1| PREDICTED: brain factor 1 [Saccoglossus kowalevskii]
          Length = 380

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFR 158
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R     R
Sbjct: 114 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTSASR 169



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI K++PYYR   +GWQ
Sbjct: 68  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKHFPYYRENKQGWQ 113


>gi|213626620|gb|AAI69733.1| Winged helix transcription factor XFD-11 [Xenopus laevis]
          Length = 492

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 75  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQ 124



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 168


>gi|148227860|ref|NP_001081683.1| forkhead box protein C1-A [Xenopus laevis]
 gi|82248251|sp|Q9PVZ3.1|FXC1A_XENLA RecName: Full=Forkhead box protein C1-A; Short=FoxC1; AltName:
           Full=Fork head domain-related protein 11; Short=XFD-11
 gi|5042343|emb|CAB44727.1| XFD-11 protein [Xenopus laevis]
 gi|213626829|gb|AAI70201.1| Winged helix transcription factor XFD-11 [Xenopus laevis]
          Length = 492

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 75  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQ 124



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 168


>gi|426329218|ref|XP_004025639.1| PREDICTED: forkhead box protein J3, partial [Gorilla gorilla
           gorilla]
          Length = 569

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 145 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 203

Query: 163 LSS 165
           + S
Sbjct: 204 IDS 206



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 97  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 144


>gi|332246838|ref|XP_003272562.1| PREDICTED: forkhead box protein L1 [Nomascus leucogenys]
          Length = 344

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 46/88 (52%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F+KVPR +  PGKGS+W +DP          +RRR+++  P   AP  
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEA 154

Query: 163 LSSRCTLRFPSTNIRLQFQSLVNESDPA 190
              R      S   + +  S   +S PA
Sbjct: 155 KRPRAETHERSAEAQPEAGSGTGDSGPA 182



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++   KPPYSY  LI  A+  A ++++TL+GIY FI   +P+Y    +GWQ
Sbjct: 44  AETPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQ 94


>gi|17380544|sp|P32031.2|SLP2_DROME RecName: Full=Fork head domain transcription factor slp2; AltName:
           Full=Sloppy paired locus protein 2
          Length = 445

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FP      QF   +     AP+
Sbjct: 286 AFKRSLIGPMFPGLAAYPQFGQFLTYPPTAPS 317



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 178 NEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 225


>gi|426243424|ref|XP_004015556.1| PREDICTED: forkhead box protein C2 [Ovis aries]
          Length = 323

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 1/52 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGV 154
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S + + E     RR RG+
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS-YNMFENGSFPRRPRGL 168



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 68  KDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQ 117


>gi|56972152|gb|AAH88590.1| foxa2 protein [Xenopus (Silurana) tropicalis]
          Length = 429

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAP 160
           NSIRH+LS N  F+KVPRS ++PGKGSFW + P S + + E     RRQ+   C + P
Sbjct: 190 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGN-MFENGCYLRRQKRFKCEKKP 246



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  + +K LTLS IY +I   +P+YR   + WQ
Sbjct: 143 AKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQ 189


>gi|110808236|sp|Q28HT3.1|FOXI2_XENTR RecName: Full=Forkhead box protein I2
 gi|89271880|emb|CAJ83471.1| novel fork head domain containing protein [Xenopus (Silurana)
           tropicalis]
          Length = 368

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 35/59 (59%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF 161
           NSIRHNLSLN  F KV R   +PGKG++W +DP  E       FRR+R+R      A F
Sbjct: 170 NSIRHNLSLNDCFKKVARDDNDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSESVEAGF 228



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +  +K+LTLS IYS++ +N+P+Y+ +  GWQ
Sbjct: 124 RPPYSYSSLIAMAIQNNPEKKLTLSQIYSYVAENFPFYKKSKAGWQ 169


>gi|47214897|emb|CAG01028.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 303

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R +++PGKG++W +DP  E       FRR+R+R
Sbjct: 142 NSIRHNLSLNDCFKKVARDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 191



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +A DK+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 96  RPPYSYSALIAMAIQNAQDKKLTLSQIYQYVADNFPFYKKSKAGWQ 141


>gi|241627022|ref|XP_002407977.1| transcription factor, putative [Ixodes scapularis]
 gi|215501107|gb|EEC10601.1| transcription factor, putative [Ixodes scapularis]
          Length = 305

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +++LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 77  KPPFSYNALIMMAIRQSPERRLTLNGIYEFIMKNFPYYRENKQGWQ 122



 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 40/64 (62%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R     R+   
Sbjct: 123 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASRSRLA 182

Query: 163 LSSR 166
           +  R
Sbjct: 183 VLKR 186


>gi|390465803|ref|XP_002750738.2| PREDICTED: forkhead box protein J3 isoform 2, partial [Callithrix
           jacchus]
          Length = 633

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 135 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 193

Query: 163 LSS 165
           + S
Sbjct: 194 IDS 196



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 87  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 134


>gi|169790884|ref|NP_001116096.1| uncharacterized protein LOC100142648 [Danio rerio]
 gi|166796366|gb|AAI59266.1| Zgc:175247 protein [Danio rerio]
          Length = 316

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI KN+P+YR   +GWQ
Sbjct: 62  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPFYREHKQGWQ 107



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 108 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 157


>gi|161611750|gb|AAI55933.1| LOC100127318 protein [Xenopus laevis]
          Length = 397

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAP 160
           NSIRH+LS N  F+KVPRS ++PGKGSFW + P S + + E     RRQ+   C + P
Sbjct: 158 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGN-MFENGCYLRRQKRFKCEKKP 214



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  + +K LTLS IY +I   +P+YR   + WQ
Sbjct: 111 AKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQ 157


>gi|156230158|gb|AAI52442.1| FOXJ3 protein [Homo sapiens]
 gi|208967825|dbj|BAG72558.1| forkhead box J3 [synthetic construct]
          Length = 622

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|348552280|ref|XP_003461956.1| PREDICTED: hypothetical protein LOC100730783 [Cavia porcellus]
          Length = 686

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 30/32 (93%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 155


>gi|307194451|gb|EFN76749.1| Forkhead box protein L2 [Harpegnathos saltator]
          Length = 359

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 6/103 (5%)

Query: 234 PSPTGTI-SAANSCPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPP 292
           PSP G + S  NS P++P    +  N +AD   +A   A+ TN  N    + S  +SKPP
Sbjct: 17  PSPVGALHSTTNSNPSTPSAP-STPNAAADNTASA--TASGTNNAN--GTNGSSANSKPP 71

Query: 293 YSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +SY  LI  A+  +  K+ TLS IY++IT  +PY+    KGWQ
Sbjct: 72  FSYVALIAMAIQHSAQKRATLSEIYAYITAKFPYFEKNKKGWQ 114



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 25/36 (69%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLN  F+KVPR      KG+FW +DP  E
Sbjct: 115 NSIRHNLSLNECFVKVPREGGGERKGNFWTLDPQYE 150


>gi|8623|emb|CAA46891.1| slp2 protein [Drosophila melanogaster]
          Length = 445

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R     R+   
Sbjct: 226 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLA 285

Query: 163 LSSRCTL--RFPSTNIRLQFQSLVNESDPAPT 192
              R  +   FP      QF   +     AP+
Sbjct: 286 AFKRSLIGPMFPGLAAYPQFGQFLTYPPTAPS 317



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPPYSY  LI+ A+  + +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 178 NEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQ 225


>gi|397483477|ref|XP_003812929.1| PREDICTED: forkhead box protein J3 isoform 1 [Pan paniscus]
 gi|397483479|ref|XP_003812930.1| PREDICTED: forkhead box protein J3 isoform 2 [Pan paniscus]
          Length = 620

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|363736626|ref|XP_001235208.2| PREDICTED: forkhead box protein E4 [Gallus gallus]
          Length = 394

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A+A +++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 86  KPPYSYIALIAMAIANAAERKLTLGGIYKFITERFPFYRENPKKWQ 131



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  F+K+PR    PGKG++W +DP +E
Sbjct: 132 NSIRHNLTLNDCFVKIPREPGHPGKGNYWTLDPAAE 167


>gi|213625139|gb|AAI69912.1| Fox factor [Xenopus laevis]
          Length = 369

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R   +PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVARDDHDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +  DK+LTLS IY+++ +N+P+Y+ +  GWQ
Sbjct: 124 RPPYSYSSLIAMAIQNTPDKKLTLSQIYNYVAENFPFYKKSKAGWQ 169


>gi|431922575|gb|ELK19518.1| Forkhead box protein J3 [Pteropus alecto]
          Length = 642

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 176 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLP-TRPKKRARSVERASTPYS 234

Query: 163 LSS 165
           + S
Sbjct: 235 IDS 237



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 128 DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 175


>gi|288541378|ref|NP_001165629.1| forkhead box protein A2-A [Xenopus laevis]
 gi|82245673|sp|Q91765.1|FXA2A_XENLA RecName: Full=Forkhead box protein A2-A; Short=FoxA2-A;
           Short=FoxA2a; AltName: Full=Fork head domain-related
           protein 3; Short=xFD-3; AltName: Full=Hepatocyte nuclear
           factor 3-beta homolog A; Short=HNF-3-beta-A;
           Short=HNF3-beta homolog A; Short=HNF3-beta-A;
           Short=xHNF3-beta-A; Short=xbeta-1
 gi|409774|gb|AAA20679.1| HNF-3beta [Xenopus laevis]
          Length = 434

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAP 160
           NSIRH+LS N  F+KVPRS ++PGKGSFW + P S + + E     RRQ+   C + P
Sbjct: 195 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGN-MFENGCYLRRQKRFKCEKKP 251



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  + +K LTLS IY +I   +P+YR   + WQ
Sbjct: 148 AKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQ 194


>gi|62858025|ref|NP_001016544.1| forkhead box protein I2 [Xenopus (Silurana) tropicalis]
 gi|213624351|gb|AAI70976.1| forkhead box I2 [Xenopus (Silurana) tropicalis]
 gi|213625617|gb|AAI70978.1| forkhead box I2 [Xenopus (Silurana) tropicalis]
          Length = 350

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 35/59 (59%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPF 161
           NSIRHNLSLN  F KV R   +PGKG++W +DP  E       FRR+R+R      A F
Sbjct: 152 NSIRHNLSLNDCFKKVARDDNDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSESVEAGF 210



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +  +K+LTLS IYS++ +N+P+Y+ +  GWQ
Sbjct: 106 RPPYSYSSLIAMAIQNNPEKKLTLSQIYSYVAENFPFYKKSKAGWQ 151


>gi|403291971|ref|XP_003937033.1| PREDICTED: forkhead box protein J3 isoform 1 [Saimiri boliviensis
           boliviensis]
 gi|403291973|ref|XP_003937034.1| PREDICTED: forkhead box protein J3 isoform 2 [Saimiri boliviensis
           boliviensis]
          Length = 622

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|167987437|gb|ACA13390.1| forkhead box c1 [Scyliorhinus canicula]
          Length = 144

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 6/83 (7%)

Query: 259 VSADLHMAAH-----YAAAHTNVVNHMSLSIS-QDDSKPPYSYAQLIVQAVASAHDKQLT 312
           + A + M +H     YAA       H S     +D  KPPYSY  LI  A+ +A DK++T
Sbjct: 27  MPAPMSMYSHPAHEQYAAGMARSYGHYSPQPQPKDMVKPPYSYIALIXXAIQNAPDKKIT 86

Query: 313 LSGIYSFITKNYPYYRTADKGWQ 335
           L+GIY FI + +P+YR   +GWQ
Sbjct: 87  LNGIYQFIMERFPFYRENKQGWQ 109



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 110 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 144


>gi|410958608|ref|XP_003985908.1| PREDICTED: forkhead box protein C1 [Felis catus]
          Length = 513

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 223 KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 272



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 273 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 316


>gi|376372985|gb|AFB35647.1| FOXL2 [Azumapecten farreri]
          Length = 368

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 33/51 (64%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S  D KPP+SY  LI  A+  + DK+LTLSGIY +I   +PYY    KGWQ
Sbjct: 125 SDPDQKPPFSYVALIAMAIKESGDKRLTLSGIYQYIISKFPYYERNKKGWQ 175



 Score = 47.8 bits (112), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/33 (63%), Positives = 24/33 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP 135
           NSIRHNLSLN  F+KVPR      KG+FW +DP
Sbjct: 176 NSIRHNLSLNECFVKVPREGGGERKGNFWTLDP 208


>gi|410032813|ref|XP_001172907.2| PREDICTED: forkhead box protein J3 isoform 3 [Pan troglodytes]
          Length = 647

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 149 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 207

Query: 163 LSS 165
           + S
Sbjct: 208 IDS 210



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 101 DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 148


>gi|432104497|gb|ELK31115.1| Forkhead box protein J3 [Myotis davidii]
          Length = 679

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 165 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 223

Query: 163 LSS 165
           + S
Sbjct: 224 IDS 226



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 117 DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 164


>gi|395730675|ref|XP_002811012.2| PREDICTED: forkhead box protein J3 [Pongo abelii]
          Length = 646

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 148 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 206

Query: 163 LSS 165
           + S
Sbjct: 207 IDS 209



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 100 DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 147


>gi|332248492|ref|XP_003273396.1| PREDICTED: forkhead box protein J3 isoform 1 [Nomascus leucogenys]
          Length = 622

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|291399146|ref|XP_002715759.1| PREDICTED: forkhead box J3 [Oryctolagus cuniculus]
          Length = 617

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 174 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 232

Query: 163 LSS 165
           + S
Sbjct: 233 IDS 235



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 126 DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 173


>gi|148698488|gb|EDL30435.1| forkhead box J3 [Mus musculus]
          Length = 623

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|84105533|gb|AAI11545.1| Foxc2-a protein [Xenopus laevis]
          Length = 302

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%)

Query: 278 NHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +H   +  +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 59  HHHQPTAPKDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQ 116



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 117 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDS 151


>gi|40789027|dbj|BAA82993.2| KIAA1041 protein [Homo sapiens]
          Length = 642

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 144 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 202

Query: 163 LSS 165
           + S
Sbjct: 203 IDS 205



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 96  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 143


>gi|402079129|gb|EJT74394.1| forkhead transcription factor G [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 759

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 36/47 (76%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN+ FIK  R +++PGKG++W I+PG EH  +++   R+
Sbjct: 252 NSIRHNLSLNKNFIKHERPKDDPGKGNYWAIEPGMEHLFMKEKLARK 298



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           I  D +KP +SYA LI  A+  +  ++LTLS IY +I+ N+ +Y   D GWQ
Sbjct: 200 IVDDGTKPGHSYAMLIGMAILRSPQRRLTLSQIYKWISDNFSFYSPNDAGWQ 251


>gi|156230782|gb|AAI51829.1| Forkhead box J3 [Homo sapiens]
 gi|410225234|gb|JAA09836.1| forkhead box J3 [Pan troglodytes]
 gi|410260578|gb|JAA18255.1| forkhead box J3 [Pan troglodytes]
 gi|410260580|gb|JAA18256.1| forkhead box J3 [Pan troglodytes]
 gi|410260582|gb|JAA18257.1| forkhead box J3 [Pan troglodytes]
 gi|410260584|gb|JAA18258.1| forkhead box J3 [Pan troglodytes]
 gi|410306172|gb|JAA31686.1| forkhead box J3 [Pan troglodytes]
 gi|410336049|gb|JAA36971.1| forkhead box J3 [Pan troglodytes]
          Length = 622

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|388452414|ref|NP_001253925.1| forkhead box protein J3 [Macaca mulatta]
 gi|355557889|gb|EHH14669.1| hypothetical protein EGK_00634 [Macaca mulatta]
 gi|380785469|gb|AFE64610.1| forkhead box protein J3 isoform 1 [Macaca mulatta]
 gi|383414089|gb|AFH30258.1| forkhead box protein J3 isoform 1 [Macaca mulatta]
 gi|384941780|gb|AFI34495.1| forkhead box protein J3 isoform 1 [Macaca mulatta]
          Length = 622

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|387594310|gb|EIJ89334.1| forkhead transcription factor [Nematocida parisii ERTm3]
 gi|387596844|gb|EIJ94465.1| forkhead transcription factor [Nematocida parisii ERTm1]
          Length = 179

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 37/48 (77%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +SKPPYSYA LI +A+  +   QL+L+GIY++I +NY YY+TAD  WQ
Sbjct: 84  NSKPPYSYAILIKKALNESSTGQLSLNGIYTWIKENYSYYKTADSSWQ 131



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 2/50 (4%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F KV R + EPGKG FW+I+   E+++ EQ  + +  R
Sbjct: 132 NSIRHNLSLNKLFQKVKRPENEPGKGGFWKIN--REYEIKEQLRKEKENR 179


>gi|355689106|gb|AER98720.1| forkhead box J3 [Mustela putorius furo]
          Length = 500

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 2   NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 60

Query: 163 LSS 165
           + S
Sbjct: 61  IDS 63


>gi|281342204|gb|EFB17788.1| hypothetical protein PANDA_017238 [Ailuropoda melanoleuca]
          Length = 577

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 115 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 173

Query: 163 LSS 165
           + S
Sbjct: 174 IDS 176



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 67  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 114


>gi|338721917|ref|XP_001503206.3| PREDICTED: forkhead box protein J3 [Equus caballus]
          Length = 623

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|189236452|ref|XP_973691.2| PREDICTED: similar to sloppy-paired [Tribolium castaneum]
          Length = 265

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 38/51 (74%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S+   KPPYSY  LI+ A+ ++ +K+LTL+GIY +I +N+PYY+   +GWQ
Sbjct: 74  SKPTEKPPYSYNALIMMAIRNSPEKRLTLNGIYEYIIRNFPYYKENKQGWQ 124



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I  +  + R+R
Sbjct: 125 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGTSTGKLRRR 174


>gi|27370018|ref|NP_766287.1| forkhead box protein J3 [Mus musculus]
 gi|47605695|sp|Q8BUR3.1|FOXJ3_MOUSE RecName: Full=Forkhead box protein J3
 gi|26350017|dbj|BAC38648.1| unnamed protein product [Mus musculus]
 gi|34849679|gb|AAH58231.1| Forkhead box J3 [Mus musculus]
 gi|74228407|dbj|BAE24042.1| unnamed protein product [Mus musculus]
          Length = 623

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|260815068|ref|XP_002602296.1| hypothetical protein BRAFLDRAFT_228103 [Branchiostoma floridae]
 gi|260841823|ref|XP_002614110.1| hypothetical protein BRAFLDRAFT_245472 [Branchiostoma floridae]
 gi|229287604|gb|EEN58308.1| hypothetical protein BRAFLDRAFT_228103 [Branchiostoma floridae]
 gi|229299500|gb|EEN70119.1| hypothetical protein BRAFLDRAFT_245472 [Branchiostoma floridae]
          Length = 112

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ ++ +++ TL+GIY FI  ++PYYR ADK WQ
Sbjct: 12  KPPYSYVALITMAIVNSPERKTTLAGIYKFIMDHFPYYREADKKWQ 57



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNL+LN  F+K+ R    PGKGS W +DPG+E      ++ RRR R
Sbjct: 58  NSIRHNLTLNDCFVKLARHPNRPGKGSLWALDPGAEGMFDNGSYLRRRSR 107


>gi|147899746|ref|NP_001089009.1| forkhead box protein I2-A [Xenopus laevis]
 gi|75570686|sp|Q5NDM2.1|FXI2A_XENLA RecName: Full=Forkhead box protein I2-A; AltName: Full=XlFoxI2-A
 gi|56550342|emb|CAI30462.1| fox factor [Xenopus laevis]
          Length = 369

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R   +PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVARDDHDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +  DK+LTLS IY+++ +N+P+Y+ +  GWQ
Sbjct: 124 RPPYSYSSLIAMAIQNTPDKKLTLSQIYNYVAENFPFYKKSKAGWQ 169


>gi|82706188|gb|ABB89478.1| forkhead transcription factor C [Strongylocentrotus purpuratus]
          Length = 336

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 89  KDMVKPPYSYIALIAMAIMNASDKKITLNGIYQFIMDRFPFYRENKQGWQ 138



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  FIK+PR  ++PGKGS+W +DP S
Sbjct: 139 NSIRHNLSLNDCFIKIPRDDKKPGKGSYWSLDPDS 173


>gi|291403680|ref|XP_002717978.1| PREDICTED: forkhead box G1-like [Oryctolagus cuniculus]
          Length = 395

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 59  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 108



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 18/28 (64%), Positives = 23/28 (82%)

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 31  EKRLTLNGIYEFIMKNFPYYRENKQGWQ 58


>gi|238503410|ref|XP_002382938.1| forkhead transcription factor (Sep1), putative [Aspergillus flavus
           NRRL3357]
 gi|220690409|gb|EED46758.1| forkhead transcription factor (Sep1), putative [Aspergillus flavus
           NRRL3357]
          Length = 684

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI-EQAFRRRRQRGVPCFRAP 160
           NSIRHNLSLN+ FIK  R +++PGKG++W I+PG E + + ++  RR     +P   AP
Sbjct: 213 NSIRHNLSLNKAFIKQERPKDDPGKGNYWAIEPGMEAQFLKDKPLRRATMSSIPLPAAP 271



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 36/57 (63%)

Query: 279 HMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           H    I  D  KPPYSYA LI  ++  A +++LTL+ IY +I+  + YY+ +D GWQ
Sbjct: 156 HEMPPIEDDGVKPPYSYATLIGMSILRAPNRRLTLAQIYRWISDTFSYYKNSDPGWQ 212


>gi|390461332|ref|XP_003732654.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein C1 [Callithrix
           jacchus]
          Length = 450

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQ 123


>gi|341889041|gb|EGT44976.1| CBN-UNC-130 protein [Caenorhabditis brenneri]
          Length = 334

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 34/50 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KVPR    PGKG++W +DP  E      +F RRR+R
Sbjct: 177 NSIRHNLSLNDCFVKVPRGPGNPGKGNYWTLDPKCEDMFDNGSFLRRRKR 226



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 29/47 (61%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SKPPYSY  LI  ++ ++ +K+LTLS I  FI   + YY+     WQ
Sbjct: 130 SKPPYSYIALIAMSILNSPEKKLTLSEICDFIMNRFDYYKEKFPAWQ 176


>gi|326434190|gb|EGD79760.1| winged helix protein CWH-5 [Salpingoeca sp. ATCC 50818]
          Length = 1159

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 2/79 (2%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRH--IEIFFEHPNFFMTC 92
           A AKLQG +F Y ++   +T+GR +    VD+N+G SS ISR H  IE  F    F +  
Sbjct: 24  AYAKLQGEDFTYYIQTLSVTLGRYTPTNRVDINLGTSSAISRLHAKIEYNFNLQQFVLFP 83

Query: 93  NGKNGVFVDGNSIRHNLSL 111
            GKNGV+++G+  + + + 
Sbjct: 84  LGKNGVYINGDLYKRDTAF 102



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 34/47 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN+ F++V R   EPGKG+FW I+P     +++  F+R+
Sbjct: 560 NSIRHNLSLNKNFVRVTRGPNEPGKGAFWIIEPTMYDDIVKDLFKRK 606



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 1/47 (2%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTAD-KGWQ 335
           KPPYSYA +I QA+    +++ TL+GIY +I  +YPY+ T D  GWQ
Sbjct: 513 KPPYSYAVMIAQAIHKHPERRQTLAGIYKYIMDSYPYFATQDPTGWQ 559


>gi|47207966|emb|CAF93027.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 310

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 36  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 85



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 26/35 (74%)

Query: 301 QAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            A+  + +K++TL+GIY FI KN+PYYR   +GWQ
Sbjct: 1   MAIRQSPEKRVTLNGIYEFIMKNFPYYRENKQGWQ 35


>gi|402854173|ref|XP_003891750.1| PREDICTED: forkhead box protein J3 [Papio anubis]
          Length = 663

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 165 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 223

Query: 163 LSS 165
           + S
Sbjct: 224 IDS 226



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 117 DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 164


>gi|213625137|gb|AAI69910.1| Fox factor [Xenopus laevis]
          Length = 369

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R   +PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVARDDHDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +  DK+LTLS IY+++ +N+P+Y+ +  GWQ
Sbjct: 124 RPPYSYSSLIAMAIQNTPDKKLTLSQIYNYVAENFPFYKKSKAGWQ 169


>gi|410966986|ref|XP_003990005.1| PREDICTED: forkhead box protein J3 [Felis catus]
          Length = 622

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|358411603|ref|XP_003582070.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein J3 [Bos
           taurus]
          Length = 625

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|195174482|ref|XP_002028002.1| GL15055 [Drosophila persimilis]
 gi|194115724|gb|EDW37767.1| GL15055 [Drosophila persimilis]
          Length = 423

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 70  KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQ 115



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDS 150


>gi|126330495|ref|XP_001381612.1| PREDICTED: forkhead box protein J3 [Monodelphis domestica]
          Length = 607

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +  +  ++R R V     P+ 
Sbjct: 109 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDNNPKEDTLP-SRPKKRARSVERASTPYS 167

Query: 163 LSS 165
           + S
Sbjct: 168 IDS 170



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 61  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 108


>gi|359064291|ref|XP_003585960.1| PREDICTED: forkhead box protein J3 [Bos taurus]
          Length = 625

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|253722540|pdb|2HDC|A Chain A, Structure Of Transcription Factor GenesisDNA COMPLEX
          Length = 97

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+K+PR    PGKG++W +DP SE      +F RRR+R
Sbjct: 48  NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKR 97



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 29/46 (63%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI+  +PYYR     WQ
Sbjct: 2   KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQ 47


>gi|395508443|ref|XP_003758521.1| PREDICTED: forkhead box protein C2 [Sarcophilus harrisii]
          Length = 372

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%)

Query: 278 NHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +H   +  +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 61  HHHQPTAPKDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 118



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 119 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 162


>gi|260841829|ref|XP_002614113.1| hypothetical protein BRAFLDRAFT_245493 [Branchiostoma floridae]
 gi|229299503|gb|EEN70122.1| hypothetical protein BRAFLDRAFT_245493 [Branchiostoma floridae]
          Length = 112

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ ++ +++ TL+GIY FI  ++PYYR ADK WQ
Sbjct: 12  KPPYSYVALITMAIVNSPERKTTLAGIYKFIMDHFPYYREADKKWQ 57



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNL+LN  F+K+ R    PGKGS W +DPG+E      ++ RRR R
Sbjct: 58  NSIRHNLTLNDCFVKLARHPNRPGKGSLWALDPGAEGMFDNGSYLRRRSR 107


>gi|449282508|gb|EMC89341.1| Forkhead box protein C2, partial [Columba livia]
          Length = 463

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 68  KDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 152


>gi|75016314|sp|Q8ITI5.1|FOXG1_MNELE RecName: Full=Forkhead box protein G1; AltName: Full=Brain factor
           1; Short=ctenoBF-1
 gi|23307646|gb|AAN17798.1|AF477500_1 brain factor 1-like protein [Mnemiopsis leidyi]
          Length = 318

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 34/47 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN+ F+KVPR   +PGKG++W ++P S+   I    RRR
Sbjct: 73  NSIRHNLSLNKCFVKVPRHYNDPGKGNYWMLNPNSDEVFIGGKLRRR 119



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 37/63 (58%)

Query: 273 HTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADK 332
           H   + ++  S S    KP +SY  LI  A++ +  K+LTLS IY FI + +PYYR   K
Sbjct: 10  HPFSIENILKSASPKPQKPLFSYNALIAMAISQSPLKKLTLSEIYDFIIETFPYYRDNKK 69

Query: 333 GWQ 335
           GWQ
Sbjct: 70  GWQ 72


>gi|440911635|gb|ELR61280.1| Forkhead box protein J3, partial [Bos grunniens mutus]
          Length = 616

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 115 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 173

Query: 163 LSS 165
           + S
Sbjct: 174 IDS 176



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 67  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 114


>gi|319740958|gb|ADV68999.1| forkhead box g [Patiria miniata]
          Length = 315

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 35/47 (74%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            KPP+SY  LI+ A+ S+ +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 117 EKPPFSYNALIMMAIRSSPEKRLTLNGIYEYIMTNFPYYRENKQGWQ 163



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFR 158
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R     R
Sbjct: 164 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTAASR 219


>gi|395853111|ref|XP_003799061.1| PREDICTED: forkhead box protein J3 [Otolemur garnettii]
          Length = 842

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +  ++     ++R R V     P+ 
Sbjct: 344 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLP-TRPKKRARSVERASTPYS 402

Query: 163 LSS 165
           + S
Sbjct: 403 IDS 405



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 296 DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 343


>gi|321458612|gb|EFX69677.1| hypothetical protein DAPPUDRAFT_8599 [Daphnia pulex]
          Length = 95

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 1/50 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIKVPR +  PGKG+FW +DP   + + E    RRR+R
Sbjct: 44  NSIRHNLSLNDCFIKVPREKGRPGKGAFWTLDPAC-YDMFEAGNYRRRKR 92



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/43 (55%), Positives = 30/43 (69%)

Query: 293 YSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           YSY  LI  A+ SA DK++TL+GIY FI   +PYYR   +GWQ
Sbjct: 1   YSYIALIAMAIQSATDKKITLNGIYQFIMDRFPYYRENRQGWQ 43


>gi|195011574|ref|XP_001983216.1| GH15773 [Drosophila grimshawi]
 gi|193896698|gb|EDV95564.1| GH15773 [Drosophila grimshawi]
          Length = 350

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA  ++LTLSGIY FI   +PYYR   +GWQ
Sbjct: 92  KPPFSYIALIAMAISSAPSQRLTLSGIYKFIMDKFPYYRENKQGWQ 137



 Score = 44.7 bits (104), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+KV R +      +  GKGS+W +D  S   + EQ 
Sbjct: 138 NSIRHNLSLNDCFVKVARDKNTIEDNDSAGKGSYWMLD-ASATDMFEQG 185


>gi|1766075|gb|AAC60065.1| winged helix protein CWH-2 [Gallus gallus]
          Length = 445

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 35  KDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQ 84



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 85  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 119


>gi|149051192|gb|EDM03365.1| rCG62338 [Rattus norvegicus]
          Length = 299

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 37  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 86



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 300 VQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + A+  + +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 1   MMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQ 36


>gi|321477566|gb|EFX88524.1| hypothetical protein DAPPUDRAFT_37508 [Daphnia pulex]
          Length = 92

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/46 (56%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  + +K+LTLS IY++ITK +PYY    KGWQ
Sbjct: 1   KPPYSYVALIAMAIKESREKRLTLSEIYNYITKKFPYYEKNKKGWQ 46



 Score = 46.2 bits (108), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 2/38 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPG--KGSFWRIDPGSE 138
           NSIRHNLSLN  F+K+PR     G  KG++W +DP  E
Sbjct: 47  NSIRHNLSLNECFVKIPREGNATGDRKGNYWTLDPQYE 84


>gi|395805720|gb|AFN73238.1| forkhead box C2, partial [Homo sapiens]
          Length = 133

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117


>gi|363753504|ref|XP_003646968.1| hypothetical protein Ecym_5396 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356890604|gb|AET40151.1| hypothetical protein Ecym_5396 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 717

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 41/59 (69%), Gaps = 3/59 (5%)

Query: 280 MSLSISQDDS---KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++  +S+D++   KPP+SYA +I QA+  +HD +L+LS IY +I+ NY +YR    GWQ
Sbjct: 243 LATDLSRDENRNVKPPHSYATMITQAILCSHDGELSLSAIYKYISANYAFYRHTKSGWQ 301



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 29/42 (69%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQ 144
           NSIRHNLSLN+ F KVPR   EPGKG  WRI    + + +E+
Sbjct: 302 NSIRHNLSLNKAFEKVPRKPGEPGKGMKWRISEDYQREFLEK 343



 Score = 40.0 bits (92), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 35 AIAKLQGREFEYMVRQKRITIGRNSSRGD--VDVNMGLSSFISRRHIEIFF 83
          A AK+ G+++ Y V+    +IGRN+S  D  + +++G +  +SR+H  I F
Sbjct: 46 AYAKISGKDWTYYVKDMITSIGRNTSPQDHSIHIDLGPAKVVSRQHASISF 96


>gi|165979113|gb|ABY77002.1| FoxC1/2 [Petromyzon marinus]
          Length = 168

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 246 CPTSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVAS 305
            P +P G+++    SAD + A    + H    +H   +  +D  KPPYSY  LI  A+ S
Sbjct: 38  LPAAPVGMYSA--ASADPYSAG--LSRHYGPYSHPHQA-PKDLVKPPYSYIALITMAIQS 92

Query: 306 AHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 93  APDKKVTLNGIYQFIMDKFPFYRGNKQGWQ 122



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRR 148
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F R
Sbjct: 123 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDSYNMFENGSFLR 168


>gi|114149302|sp|P84961.1|FXA2B_XENLA RecName: Full=Forkhead box protein A2-B; Short=FoxA2-B;
           Short=FoxA2b; AltName: Full=Fork head domain-related
           protein 3'; Short=xFD-3'; AltName: Full=Hepatocyte
           nuclear factor 3-beta homolog B; Short=HNF-3-beta-B;
           Short=HNF3-beta homolog B; Short=HNF3-beta-B;
           Short=xHNF3-beta-B
          Length = 433

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAP 160
           NSIRH+LS N  F+KVPRS ++PGKGSFW + P S + + E     RRQ+   C + P
Sbjct: 193 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGN-MFENGCYLRRQKRFKCDKKP 249



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 29/47 (61%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  +  K LTLS +Y +I   +P+YR   + WQ
Sbjct: 146 AKPPYSYISLITMAIQQSPSKMLTLSEVYQWIMDLFPFYRQNQQRWQ 192


>gi|45384084|ref|NP_990469.1| forkhead box protein C2 [Gallus gallus]
 gi|2072324|gb|AAB53749.1| winged helix transcriptional factor MFH-1 [Gallus gallus]
          Length = 468

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 68  KDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 161


>gi|156366825|ref|XP_001627122.1| predicted protein [Nematostella vectensis]
 gi|74419006|gb|ABA03228.1| forkhead domain protein 1 [Nematostella vectensis]
 gi|156214022|gb|EDO35022.1| predicted protein [Nematostella vectensis]
          Length = 285

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 35/53 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVP 155
           NSIRHNLSLNR F+KV R + +PGKG +W +DP  E    +  + RRR+   P
Sbjct: 108 NSIRHNLSLNRCFVKVHREKADPGKGCYWTLDPAYEEMFEDGKYWRRRRTKKP 160



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADK-GWQ 335
           KPPYSY  LI  A+  +  +++TL+GIY FIT  +PYY   +K GWQ
Sbjct: 61  KPPYSYVALISMAIKQSPGRKITLNGIYHFITSAFPYYTWQNKRGWQ 107


>gi|348508396|ref|XP_003441740.1| PREDICTED: forkhead box protein G1-like [Oreochromis niloticus]
          Length = 398

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 21/129 (16%)

Query: 26  SKIQWKSGTAIAKLQGREFEYMVRQKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEH 85
           +K++ K+GT   K +G + E      R T G   S          ++ I    +    + 
Sbjct: 64  AKVETKAGTVTGKREGNKEE-----SRETGGAEESVKPEKPPFSYNALI----MMAIRQS 114

Query: 86  PNFFMTCNGKNGVFVDG------------NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRI 133
           P   +T NG     +D             NSIRHNLSLN+ F+KVPR  ++PGKG++W +
Sbjct: 115 PERRLTLNGIYEFIMDNFPYYRQNRQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWML 174

Query: 134 DPGSEHKLI 142
           DP SE   I
Sbjct: 175 DPCSEDVFI 183



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +++LTL+GIY FI  N+PYYR   +GWQ
Sbjct: 98  KPPFSYNALIMMAIRQSPERRLTLNGIYEFIMDNFPYYRQNRQGWQ 143


>gi|190576695|gb|ACE79155.1| winged helix/forkhead transcription factor FoxEa [Branchiostoma
           floridae]
          Length = 381

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A++ +++LTL GIY FI   +PYYR  DK WQ
Sbjct: 62  KPPYSYIALISMAIANSPERKLTLGGIYKFIMDRFPYYRDRDKKWQ 107



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  F+K+PR    PGKG++W +DP +E
Sbjct: 108 NSIRHNLTLNDCFVKIPREPGRPGKGNYWTLDPAAE 143


>gi|32307809|gb|AAP79301.1| brain factor 1 [Saccoglossus kowalevskii]
          Length = 356

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 37/56 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFR 158
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R     R
Sbjct: 114 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTSASR 169



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+  + +K+LTL+GIY FI K++PYYR   +GWQ
Sbjct: 68  KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKHFPYYRENKQGWQ 113


>gi|355710458|gb|EHH31922.1| Forkhead-related protein FKHL14 [Macaca mulatta]
          Length = 273

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 248 TSPRGLHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAH 307
            SP G+++         M   YA  H     H   +  +D  KPPYSY  LI  A+ +A 
Sbjct: 35  ASPMGVYSGHPEQYSAGMGRSYAPYH-----HHQPAAPKDLVKPPYSYIALITMAIQNAP 89

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 90  EKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 161


>gi|281349855|gb|EFB25439.1| hypothetical protein PANDA_022465 [Ailuropoda melanoleuca]
          Length = 71

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/42 (64%), Positives = 32/42 (76%)

Query: 293 YSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGW 334
           YSYA+ I Q      +KQLTL+GIY+ ITKNYPYY+TADK W
Sbjct: 4   YSYAEFIEQKTMMVPEKQLTLNGIYTHITKNYPYYKTADKSW 45



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/25 (88%), Positives = 22/25 (88%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGK 127
           N IRHNLSLN YFI VPRSQEEPGK
Sbjct: 47  NPIRHNLSLNPYFIIVPRSQEEPGK 71


>gi|110808246|sp|Q63ZH2.2|FXI2B_XENLA RecName: Full=Forkhead box protein I2-B; AltName: Full=XlFoxI2-B
          Length = 367

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R   +PGKG++W +DP  E       FRR+R+R
Sbjct: 170 NSIRHNLSLNDCFKKVARDDNDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  ++ +  DK+LTLS IY+++ +N+P+Y+ +  GWQ
Sbjct: 124 RPPYSYSSLIAMSIQNTPDKKLTLSQIYNYVAENFPFYKKSKAGWQ 169


>gi|284795270|ref|NP_001089960.2| forkhead box protein C2-A [Xenopus laevis]
 gi|82248250|sp|Q9PVY9.1|FXC2A_XENLA RecName: Full=Forkhead box protein C2-A; Short=FoxC2-A;
           Short=FoxC2a; AltName: Full=Fork head domain-related
           protein 4; Short=FD-4; Short=xFD-4; Short=xFD4 A;
           AltName: Full=Forkhead protein 7; Short=FKH-7;
           Short=xFKH7
 gi|5824329|emb|CAB54143.1| FD-4 protein [Xenopus laevis]
          Length = 465

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%)

Query: 278 NHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +H   +  +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 60  HHHQPTAPKDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQ 117



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 118 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDSYNMFENGSF 161


>gi|260815573|ref|XP_002602547.1| hypothetical protein BRAFLDRAFT_266592 [Branchiostoma floridae]
 gi|18653452|gb|AAK85731.1| winged helix transcription factor AmphiFoxE4 [Branchiostoma
           floridae]
 gi|229287858|gb|EEN58559.1| hypothetical protein BRAFLDRAFT_266592 [Branchiostoma floridae]
          Length = 381

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A++ +++LTL GIY FI   +PYYR  DK WQ
Sbjct: 62  KPPYSYIALISMAIANSPERKLTLGGIYKFIMDRFPYYRDRDKKWQ 107



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  F+K+PR    PGKG++W +DP +E
Sbjct: 108 NSIRHNLTLNDCFVKIPREPGRPGKGNYWTLDPAAE 143


>gi|405950763|gb|EKC18729.1| Forkhead box protein B1 [Crassostrea gigas]
          Length = 302

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFR--AP 160
           NS+RHNLS N  FIK+PR  + PGKGS+W + P S       +F RRR+R    FR   P
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDRPGKGSYWALHPMSGDMFENGSFLRRRKRFKMTFRHQLP 118

Query: 161 FGLSSRCTL----RFPSTNIRLQFQSLVNESDPAPTG 193
              S + TL    R    N R+ + ++ N++    TG
Sbjct: 119 LSESLKHTLALESRIFQDNSRMNYFAMNNQAVSPSTG 155



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 30/49 (61%)

Query: 287 DDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D KPPYSY  L   A+ ++ +K L LS IY FI   +P+YR   + WQ
Sbjct: 10  NDQKPPYSYIALTAMAIQNSAEKMLPLSDIYKFIMDRFPFYRQNTQRWQ 58


>gi|332249015|ref|XP_003273659.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein S1 [Nomascus
           leucogenys]
          Length = 282

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 1/44 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR   +PGKGS+W +DP   H + E AF
Sbjct: 64  NSIRHNLSLNECFVKVPRDDRKPGKGSYWTLDPDC-HDMFEHAF 106



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 32/51 (62%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + + +KPPYSY  LI  A+ S+  ++ TLSGIY +I   + +YR    GWQ
Sbjct: 13  TTEPTKPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQ 63


>gi|390351966|ref|XP_003727782.1| PREDICTED: forkhead box protein C2-B [Strongylocentrotus
           purpuratus]
          Length = 519

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 89  KDMVKPPYSYIALIAMAIMNASDKKITLNGIYQFIMDRFPFYRENKQGWQ 138



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  FIK+PR  ++PGKGS+W +DP S
Sbjct: 139 NSIRHNLSLNDCFIKIPRDDKKPGKGSYWSLDPDS 173


>gi|147899569|ref|NP_001088107.1| forkhead box protein I2-B [Xenopus laevis]
 gi|52354731|gb|AAH82945.1| Foxi2-b protein [Xenopus laevis]
          Length = 349

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F KV R   +PGKG++W +DP  E       FRR+R+R
Sbjct: 152 NSIRHNLSLNDCFKKVARDDNDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 201



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  ++ +  DK+LTLS IY+++ +N+P+Y+ +  GWQ
Sbjct: 106 RPPYSYSSLIAMSIQNTPDKKLTLSQIYNYVAENFPFYKKSKAGWQ 151


>gi|327287970|ref|XP_003228701.1| PREDICTED: forkhead box protein J1.2-like [Anolis carolinensis]
          Length = 344

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F KVPR ++EPGKG FW+I P   H   +     RR R
Sbjct: 165 NSIRHNLSLNKCFQKVPRRKDEPGKGGFWQIHPQFAHLFADDGVFHRRHR 214



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSYA LI  A+ ++   +LTL+ IY++I +N+ +YR A+  WQ
Sbjct: 119 KPPYSYATLICMAMRASKGGRLTLAAIYAWIAENFAFYRLAEPSWQ 164


>gi|308509110|ref|XP_003116738.1| CRE-UNC-130 protein [Caenorhabditis remanei]
 gi|308241652|gb|EFO85604.1| CRE-UNC-130 protein [Caenorhabditis remanei]
          Length = 335

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 34/50 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KVPR    PGKG++W +DP  E      +F RRR+R
Sbjct: 179 NSIRHNLSLNDCFVKVPRGPGNPGKGNYWALDPKCEDMFDNGSFLRRRKR 228



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SKPPYSY  LI  ++ ++  K+LTLS I  FI   + YY+     WQ
Sbjct: 132 SKPPYSYIALIAMSIINSPGKKLTLSEICEFIINRFEYYKEKFPAWQ 178


>gi|332167869|gb|AEE25631.1| forkhead box protein, partial [Lampetra planeri]
          Length = 145

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 38/53 (71%)

Query: 283 SISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + ++D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 58  AAAKDMVKPPYSYIALITMAIQNAADKRITLNGIYQFIMERFPFYRENKQGWQ 110



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S
Sbjct: 111 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDS 145


>gi|301784085|ref|XP_002927458.1| PREDICTED: forkhead box protein J3-like [Ailuropoda melanoleuca]
          Length = 639

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 141 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 199

Query: 163 LSS 165
           + S
Sbjct: 200 IDS 202



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 93  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 140


>gi|410056|gb|AAA03159.1| fork head related protein, partial [Mus musculus]
          Length = 117

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 4   KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 53



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 54  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 97


>gi|395526752|ref|XP_003765520.1| PREDICTED: forkhead box protein J3 [Sarcophilus harrisii]
          Length = 729

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 181 DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 228



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +  +  ++R R V     P+ 
Sbjct: 229 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDNNPKEDTLP-SRPKKRARSVERASTPYS 287

Query: 163 LSS 165
           + S
Sbjct: 288 IDS 290


>gi|68226724|ref|NP_944598.2| forkhead box protein I3 [Danio rerio]
 gi|68085155|gb|AAH66726.2| Forkhead box I2 [Danio rerio]
          Length = 383

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +AH+K+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 129 RPPYSYSALIAMAIQNAHEKKLTLSQIYQYVADNFPFYKKSKAGWQ 174



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 29/36 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E
Sbjct: 175 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCE 210


>gi|317036990|ref|XP_001398455.2| forkhead box protein L2 [Aspergillus niger CBS 513.88]
          Length = 716

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI-EQAFRRRRQRGVPCFRAPF 161
           NSIRHNLSLN+ FIK  R +++PGKG++W I+PG E + + ++  RR     +P   AP 
Sbjct: 248 NSIRHNLSLNKAFIKQERPKDDPGKGNYWAIEPGMEAQFLKDKPLRRATMSSLPLPAAPQ 307

Query: 162 GLSSR 166
             ++R
Sbjct: 308 KDTAR 312



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 37/57 (64%)

Query: 279 HMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           H    I  D +KPPYSYA LI  ++  A +++LTL+ IY +I+  + YY+ +D GWQ
Sbjct: 191 HEMPPIEDDGTKPPYSYATLIGMSILRAPNRRLTLAQIYKWISDTFSYYKNSDPGWQ 247


>gi|260841827|ref|XP_002614112.1| hypothetical protein BRAFLDRAFT_130703 [Branchiostoma floridae]
 gi|229299502|gb|EEN70121.1| hypothetical protein BRAFLDRAFT_130703 [Branchiostoma floridae]
          Length = 400

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ ++ +++ TL+GIY FI  ++PYYR ADK WQ
Sbjct: 81  KPPYSYVALITMAIVNSPERKTTLAGIYKFIMDHFPYYREADKKWQ 126



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 27/36 (75%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  F+K+ R    PGKGS W +DPG+E
Sbjct: 127 NSIRHNLTLNDCFVKLARHPNRPGKGSLWALDPGAE 162


>gi|190576699|gb|ACE79157.1| winged helix/forkhead transcription factor FoxEb-Ei [Branchiostoma
           floridae]
          Length = 402

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ ++ +++ TL+GIY FI  ++PYYR ADK WQ
Sbjct: 81  KPPYSYVALITMAIVNSPERKTTLAGIYKFIMDHFPYYREADKKWQ 126



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNL+LN  F+K+ R    PGKGS W +DPG+E      ++ RRR R
Sbjct: 127 NSIRHNLTLNDCFVKLARHPNRPGKGSLWALDPGAEGMFDNGSYLRRRSR 176


>gi|190576697|gb|ACE79156.1| winged helix/forkhead transcription factor FoxEb-Ei [Branchiostoma
           floridae]
          Length = 402

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ ++ +++ TL+GIY FI  ++PYYR ADK WQ
Sbjct: 81  KPPYSYVALITMAIVNSPERKTTLAGIYKFIMDHFPYYREADKKWQ 126



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNL+LN  F+K+ R    PGKGS W +DPG+E      ++ RRR R
Sbjct: 127 NSIRHNLTLNDCFVKLARHPNRPGKGSLWALDPGAEGMFDNGSYLRRRSR 176


>gi|33087227|gb|AAP92808.1| forkhead transcription factor i2 [Danio rerio]
          Length = 383

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +PPYSY+ LI  A+ +AH+K+LTLS IY ++  N+P+Y+ +  GWQ
Sbjct: 129 RPPYSYSALIAMAIQNAHEKKLTLSQIYQYVADNFPFYKKSKAGWQ 174



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 29/36 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLN  F KVPR +++PGKG++W +DP  E
Sbjct: 175 NSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCE 210


>gi|46048827|ref|NP_990337.1| forkhead box protein C1 [Gallus gallus]
 gi|3341441|emb|CAA76851.1| winged-helix transcription factor [Gallus gallus]
          Length = 528

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 35  KDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQ 84



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 85  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 128


>gi|118343784|ref|NP_001071711.1| transcription factor protein [Ciona intestinalis]
 gi|70569595|dbj|BAE06441.1| transcription factor protein [Ciona intestinalis]
          Length = 732

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/36 (69%), Positives = 31/36 (86%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLN  F KVPR++ +PGKG++W +DPGSE
Sbjct: 549 NSIRHNLSLNDCFKKVPRNENDPGKGNYWTLDPGSE 584



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 4/55 (7%)

Query: 285 SQDDS----KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S+DDS    +PPYSY+ LI  A+ S+  K++TL  IY ++   +P+Y+ +  GW+
Sbjct: 494 SKDDSDTNNRPPYSYSALIALAIQSSPGKRMTLRQIYQYVVTYFPFYKNSKTGWR 548


>gi|358373327|dbj|GAA89926.1| forkhead box protein L2 [Aspergillus kawachii IFO 4308]
          Length = 714

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI-EQAFRRRRQRGVPCFRAPF 161
           NSIRHNLSLN+ FIK  R +++PGKG++W I+PG E + + ++  RR     +P   AP 
Sbjct: 245 NSIRHNLSLNKAFIKQERPKDDPGKGNYWAIEPGMEAQFLKDKPLRRATMSSLPLPAAPQ 304

Query: 162 GLSSR 166
             ++R
Sbjct: 305 KDTAR 309



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 37/57 (64%)

Query: 279 HMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           H    I  D +KPPYSYA LI  ++  A +++LTL+ IY +I+  + YY+ +D GWQ
Sbjct: 188 HEMPPIEDDGTKPPYSYATLIGMSILRAPNRRLTLAQIYKWISDTFSYYKNSDPGWQ 244


>gi|301774919|ref|XP_002922879.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein C1-like
           [Ailuropoda melanoleuca]
          Length = 380

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 156 KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 205



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 206 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 249


>gi|195376161|ref|XP_002046865.1| GJ13122 [Drosophila virilis]
 gi|194154023|gb|EDW69207.1| GJ13122 [Drosophila virilis]
          Length = 508

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 70  KPPYSYIALIAMAIQNASDKKVTLNGIYQYIMERFPYYRDNKQGWQ 115



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 31/44 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S +     +F
Sbjct: 116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSF 159


>gi|195126052|ref|XP_002007488.1| GI12979 [Drosophila mojavensis]
 gi|193919097|gb|EDW17964.1| GI12979 [Drosophila mojavensis]
          Length = 505

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 70  KPPYSYIALIAMAIQNASDKKVTLNGIYQYIMERFPYYRDNKQGWQ 115



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 31/44 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S +     +F
Sbjct: 116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSF 159


>gi|350634104|gb|EHA22468.1| hypothetical protein ASPNIDRAFT_214129 [Aspergillus niger ATCC
           1015]
          Length = 716

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI-EQAFRRRRQRGVPCFRAPF 161
           NSIRHNLSLN+ FIK  R +++PGKG++W I+PG E + + ++  RR     +P   AP 
Sbjct: 248 NSIRHNLSLNKAFIKQERPKDDPGKGNYWAIEPGMEAQFLKDKPLRRATMSSLPLPAAPQ 307

Query: 162 GLSSR 166
             ++R
Sbjct: 308 KDTAR 312



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 37/57 (64%)

Query: 279 HMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           H    I  D +KPPYSYA LI  ++  A +++LTL+ IY +I+  + YY+ +D GWQ
Sbjct: 191 HEMPPIEDDGTKPPYSYATLIGMSILRAPNRRLTLAQIYKWISDTFSYYKNSDPGWQ 247


>gi|345316695|ref|XP_001518586.2| PREDICTED: forkhead box protein J3-like, partial [Ornithorhynchus
           anatinus]
          Length = 172

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 67  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 114



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 24/25 (96%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGK 127
           NSIRHNLSLN+ F+KVPRS+++PGK
Sbjct: 115 NSIRHNLSLNKCFLKVPRSKDDPGK 139


>gi|341957814|gb|AEL13773.1| FoxF1/2, partial [Lethenteron camtschaticum]
          Length = 137

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 33/47 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NS+RHNLSLN  F+K+P+    PGKG +W IDP SE    E +FRRR
Sbjct: 83  NSVRHNLSLNECFVKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRR 129



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LIV A+ S+  K++TLS IY F+   +P++R A +GW+
Sbjct: 37  KPPFSYIALIVMAIQSSPAKRVTLSEIYQFLQGRFPFFRGAYQGWK 82


>gi|345803900|ref|XP_547758.3| PREDICTED: forkhead box protein G1 [Canis lupus familiaris]
          Length = 315

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 53  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 102


>gi|242019779|ref|XP_002430336.1| Hepatocyte nuclear factor 3-gamma, putative [Pediculus humanus
           corporis]
 gi|212515460|gb|EEB17598.1| Hepatocyte nuclear factor 3-gamma, putative [Pediculus humanus
           corporis]
          Length = 354

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A +K++TL+GIY FI + +PYYR   +GWQ
Sbjct: 34  KDMVKPPYSYIALIAMAIQNAPEKKITLNGIYQFIMERFPYYRENKQGWQ 83



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 84  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 118


>gi|156388873|ref|XP_001634717.1| predicted protein [Nematostella vectensis]
 gi|156221803|gb|EDO42654.1| predicted protein [Nematostella vectensis]
          Length = 98

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/46 (54%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  +++TLSGIY FI +N+PYYR   +GWQ
Sbjct: 3   KPPYSYVALISMAIKQSKGQKITLSGIYQFIIENFPYYRLNKRGWQ 48



 Score = 57.4 bits (137), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/36 (61%), Positives = 29/36 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLN+ F+K+PR + +PGKG +W +DP  E
Sbjct: 49  NSIRHNLSLNKCFVKIPRERSDPGKGCYWALDPAYE 84


>gi|327279456|ref|XP_003224472.1| PREDICTED: forkhead box protein E4-like [Anolis carolinensis]
          Length = 386

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A+A +++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 80  KPPYSYIALIAMAIANAPERRLTLGGIYKFITERFPFYRENPKKWQ 125



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 25/89 (28%)

Query: 50  QKRITIGRNSSRGDVDVNMGLSSFISRRHIEIFFEHPNFFMTCNGKNGVFVDGNSIRHNL 109
           ++R+T+G            G+  FI+ R    + E+P  +             NSIRHNL
Sbjct: 98  ERRLTLG------------GIYKFITER-FPFYRENPKKWQ------------NSIRHNL 132

Query: 110 SLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           +LN  F+K+PR    PGKG++W +DP +E
Sbjct: 133 TLNDCFVKIPREPGHPGKGNYWTLDPAAE 161


>gi|326925348|ref|XP_003208878.1| PREDICTED: forkhead box protein E4-like, partial [Meleagris
           gallopavo]
          Length = 309

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A+A +++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 1   KPPYSYIALIAMAIANAAERKLTLGGIYKFITERFPFYRENPKKWQ 46



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  F+K+PR    PGKG++W +DP +E
Sbjct: 47  NSIRHNLTLNDCFVKIPREPGHPGKGNYWTLDPAAE 82


>gi|195427475|ref|XP_002061802.1| GK16995 [Drosophila willistoni]
 gi|194157887|gb|EDW72788.1| GK16995 [Drosophila willistoni]
          Length = 528

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 70  KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQ 115



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDS 150


>gi|326927489|ref|XP_003209925.1| PREDICTED: forkhead box protein C2-like [Meleagris gallopavo]
          Length = 261

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 69  KDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQ 118



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 119 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 153


>gi|195013105|ref|XP_001983802.1| GH15375 [Drosophila grimshawi]
 gi|193897284|gb|EDV96150.1| GH15375 [Drosophila grimshawi]
          Length = 508

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 70  KPPYSYIALIAMAIQNASDKKVTLNGIYQYIMERFPYYRDNKQGWQ 115



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDS 150


>gi|148228251|ref|NP_001087521.1| forkhead box protein J2 [Xenopus laevis]
 gi|82181765|sp|Q68EZ2.1|FOXJ2_XENLA RecName: Full=Forkhead box protein J2; Short=FoxJ2
 gi|51261471|gb|AAH80056.1| MGC83995 protein [Xenopus laevis]
          Length = 512

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ SA  K++TLS IY +I  N+PYYR+A  GW+
Sbjct: 57  DGKPPYSYANLIQYAINSAPAKRMTLSEIYRWICDNFPYYRSAGVGWK 104



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 28/32 (87%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F KVPR +++PGKGS+W ID
Sbjct: 105 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWMID 136


>gi|348514802|ref|XP_003444929.1| PREDICTED: forkhead box protein J3-like [Oreochromis niloticus]
          Length = 633

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +    ++R + G
Sbjct: 123 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTVPSRPKKRPRSG 173



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 33/48 (68%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+  +  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 75  DGKPPYSYASLITFAINGSPRKRMTLSEIYQWICDNFPYYREAGSGWK 122


>gi|189525242|ref|XP_001922273.1| PREDICTED: forkhead box protein J3-like [Danio rerio]
          Length = 592

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 60  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 107



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +    ++R + G
Sbjct: 108 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRPRSG 158


>gi|391867630|gb|EIT76876.1| transcription factor of the Forkhead/HNF3 family [Aspergillus
           oryzae 3.042]
          Length = 388

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/52 (51%), Positives = 37/52 (71%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQV 336
           S  D KPPYSYA LI QA+ S+ +++LTL+ IY++I   Y +YR +  GWQV
Sbjct: 329 SAKDLKPPYSYATLIAQAIFSSEEEKLTLNNIYNWIMDKYAFYRHSQSGWQV 380



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 21/88 (23%)

Query: 35  AIAKLQGREFEYMVRQKRITIGRNSSRG------------------DVDVNMGLSSFISR 76
           A AK+ GR + Y V+   + IGR   R                   +V+V++G S F+SR
Sbjct: 107 AYAKIAGRNWTYYVKTLHVNIGREPDREQKLDEQSSPVTIAARALPEVNVDLGPSKFVSR 166

Query: 77  RHIEIFF---EHPNFFMTCNGKNGVFVD 101
            H EIF+   E  ++ +  NG+NGV ++
Sbjct: 167 LHAEIFYDGEETASWHIRVNGRNGVRLN 194


>gi|296231744|ref|XP_002761283.1| PREDICTED: forkhead box protein L1 [Callithrix jacchus]
          Length = 344

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 45/88 (51%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F+KVPR +  PGKGS+W +DP          +RRR+++  P   AP  
Sbjct: 94  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAPGAPEA 153

Query: 163 LSSRCTLRFPSTNIRLQFQSLVNESDPA 190
              R         ++ + +S    S P 
Sbjct: 154 KRPRAETHERGAEVQPEMRSGEGGSGPG 181



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++   KPPYSY  LI  A+  A ++++TL+GIY FI   +P+Y    +GWQ
Sbjct: 43  AETPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQ 93


>gi|198466929|ref|XP_001354188.2| GA18636 [Drosophila pseudoobscura pseudoobscura]
 gi|198149617|gb|EAL31240.2| GA18636 [Drosophila pseudoobscura pseudoobscura]
          Length = 523

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 70  KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQ 115



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDS 150


>gi|563162|gb|AAA92038.1| FREAC-3, partial [Homo sapiens]
          Length = 106

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 2   KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 51



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 52  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 86


>gi|68354668|ref|XP_696065.1| PREDICTED: forkhead box protein E1 [Danio rerio]
          Length = 354

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A++ D++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 40  KPPYSYIALISMAIANSPDRKLTLGGIYKFITERFPFYRDNSKKWQ 85



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  FIK+PR    PGKG++W +DP +E
Sbjct: 86  NSIRHNLTLNDCFIKIPREPGRPGKGNYWALDPNAE 121


>gi|357618527|gb|EHJ71472.1| hypothetical protein KGM_16342 [Danaus plexippus]
          Length = 297

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  FIK+PR    PGKG++W +DP +E      +F RRR+R
Sbjct: 139 NSIRHNLSLNDCFIKIPREPGNPGKGNYWTLDPLAEDMFDNGSFLRRRKR 188



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  K+LTLSGI  FI   +PYYR     WQ
Sbjct: 93  KPPYSYIALITMAILQSPHKKLTLSGICEFIMTRFPYYREKFPAWQ 138


>gi|449472218|ref|XP_002196143.2| PREDICTED: forkhead box protein C2 [Taeniopygia guttata]
          Length = 489

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 69  KDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQ 118



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 119 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 153


>gi|410919949|ref|XP_003973446.1| PREDICTED: forkhead box protein J3-like [Takifugu rubripes]
          Length = 641

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 102 DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 149



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +    ++R + G
Sbjct: 150 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRPRSG 200


>gi|345326365|ref|XP_001505781.2| PREDICTED: forkhead box protein J3-like [Ornithorhynchus anatinus]
          Length = 733

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 185 DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 232



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 233 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALP-TRPKKRARSVERASTPYS 291

Query: 163 LSS 165
           + S
Sbjct: 292 IDS 294


>gi|158286845|ref|XP_308959.4| AGAP006786-PA [Anopheles gambiae str. PEST]
 gi|157020663|gb|EAA04166.4| AGAP006786-PA [Anopheles gambiae str. PEST]
          Length = 190

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY +I  N+PYYR   +GWQ
Sbjct: 69  KPPFSYIALIAMAISSAPNQRLTLSGIYKYIMDNFPYYRENRQGWQ 114



 Score = 45.1 bits (105), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 31/46 (67%), Gaps = 4/46 (8%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEE--PGKG-SFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  FIKVPR +     GKG S+W +DP S + + EQ 
Sbjct: 115 NSIRHNLSLNDCFIKVPREKASGTGGKGQSYWMLDP-SANDMFEQG 159


>gi|426215282|ref|XP_004001903.1| PREDICTED: forkhead box protein J3 [Ovis aries]
          Length = 625

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +     ++R R V     P+ 
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDSLP-TRPKKRARSVERASTPYS 182

Query: 163 LSS 165
           + S
Sbjct: 183 IDS 185



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|74227353|dbj|BAE21762.1| unnamed protein product [Mus musculus]
          Length = 186

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 30/32 (93%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 155


>gi|258503969|gb|ACV72709.1| UNC-130 [Caenorhabditis remanei]
          Length = 286

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 34/50 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KVPR    PGKG++W +DP  E      +F RRR+R
Sbjct: 162 NSIRHNLSLNDCFVKVPRGPGNPGKGNYWALDPKCEDMFDNGSFLRRRKR 211



 Score = 47.0 bits (110), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SKPPYSY  LI  ++ ++  K+LTLS I  FI   + YY+     WQ
Sbjct: 115 SKPPYSYIALIAMSIINSPGKKLTLSEICEFIINRFEYYKEKFPAWQ 161


>gi|258503965|gb|ACV72707.1| UNC-130 [Caenorhabditis remanei]
 gi|258503967|gb|ACV72708.1| UNC-130 [Caenorhabditis remanei]
 gi|258503971|gb|ACV72710.1| UNC-130 [Caenorhabditis remanei]
 gi|258503975|gb|ACV72712.1| UNC-130 [Caenorhabditis remanei]
 gi|258503977|gb|ACV72713.1| UNC-130 [Caenorhabditis remanei]
 gi|258503979|gb|ACV72714.1| UNC-130 [Caenorhabditis remanei]
 gi|258503981|gb|ACV72715.1| UNC-130 [Caenorhabditis remanei]
 gi|258503983|gb|ACV72716.1| UNC-130 [Caenorhabditis remanei]
 gi|258503985|gb|ACV72717.1| UNC-130 [Caenorhabditis remanei]
 gi|258503987|gb|ACV72718.1| UNC-130 [Caenorhabditis remanei]
 gi|258503989|gb|ACV72719.1| UNC-130 [Caenorhabditis remanei]
          Length = 286

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 34/50 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KVPR    PGKG++W +DP  E      +F RRR+R
Sbjct: 162 NSIRHNLSLNDCFVKVPRGPGNPGKGNYWALDPKCEDMFDNGSFLRRRKR 211



 Score = 47.0 bits (110), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SKPPYSY  LI  ++ ++  K+LTLS I  FI   + YY+     WQ
Sbjct: 115 SKPPYSYIALIAMSIINSPGKKLTLSEICEFIINRFEYYKEKFPAWQ 161


>gi|348521676|ref|XP_003448352.1| PREDICTED: forkhead box protein J3 isoform 1 [Oreochromis
           niloticus]
          Length = 604

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 60  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 107



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +    ++R + G
Sbjct: 108 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRPRSG 158


>gi|194208873|ref|XP_001916650.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein L1-like [Equus
           caballus]
          Length = 309

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 59/129 (45%), Gaps = 9/129 (6%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F+KVPR +  PGKGS+W +DP          +RRR+++  P       
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGDGEA 154

Query: 163 LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLRINIPD 222
             +R   + P     L         DP+P    V  +G  V G  A +   P   +N P 
Sbjct: 155 KRARVETQEPFPPAPLH--------DPSPASPEV-DAGDAVQGAAAVTVGQPARTVNGPG 205

Query: 223 HPHTEISSS 231
            P   IS S
Sbjct: 206 SPRRCISRS 214



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++   KPPYSY  LI  A+  A ++++TL+GIY FI   +P+Y    +GWQ
Sbjct: 44  AEPPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQ 94


>gi|120952618|ref|NP_032050.2| forkhead box protein L1 [Mus musculus]
 gi|408360106|sp|Q64731.2|FOXL1_MOUSE RecName: Full=Forkhead box protein L1; AltName:
           Full=Forkhead-related protein FKHL11; AltName:
           Full=Transcription factor FKH-6
 gi|148679707|gb|EDL11654.1| forkhead box L1 [Mus musculus]
 gi|187950795|gb|AAI37807.1| Forkhead box L1 [Mus musculus]
 gi|187952719|gb|AAI37806.1| Forkhead box L1 [Mus musculus]
          Length = 336

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 39/64 (60%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F+KVPR +  PGKGS+W +DP          +RRR+++  P   +P  
Sbjct: 95  NSIRHNLSLNECFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAAGSPEA 154

Query: 163 LSSR 166
             +R
Sbjct: 155 KRTR 158



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 31/46 (67%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  A ++++TL+GIY FI   +P+Y    +GWQ
Sbjct: 49  KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQ 94


>gi|355745203|gb|EHH49828.1| hypothetical protein EGM_00553 [Macaca fascicularis]
          Length = 592

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 29/36 (80%), Gaps = 1/36 (2%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSF-WRIDPGS 137
           NSIRHNLSLN+ F+KVPRS+++PGK S  + ID  S
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKASTPYSIDSDS 159


>gi|242005809|ref|XP_002423753.1| forkhead protein/ forkhead protein domain, putative [Pediculus
           humanus corporis]
 gi|212506955|gb|EEB11015.1| forkhead protein/ forkhead protein domain, putative [Pediculus
           humanus corporis]
          Length = 520

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 29/32 (90%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F+K+PRS+ EPGKG FWR+D
Sbjct: 386 NSIRHNLSLNKCFVKIPRSKNEPGKGGFWRLD 417



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPP SYA LI  A+  A++ ++TL+ IY++I +N+ YYR AD  WQ
Sbjct: 339 DKKPPISYATLICMAM-RANNNKMTLAAIYNWIKENFMYYRNADPSWQ 385


>gi|426251431|ref|XP_004019425.1| PREDICTED: forkhead box protein C1 [Ovis aries]
          Length = 264

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 35/53 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVP 155
           NSIRHNLSLN  F+KVPR +  PGKGS+W +DP          +RRR+++  P
Sbjct: 124 NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKP 176


>gi|37360206|dbj|BAC98081.1| mKIAA1041 protein [Mus musculus]
          Length = 595

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 82  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 129



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 35/47 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +    ++R
Sbjct: 130 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKR 176


>gi|258503959|gb|ACV72704.1| UNC-130 [Caenorhabditis remanei]
          Length = 286

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 34/50 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KVPR    PGKG++W +DP  E      +F RRR+R
Sbjct: 162 NSIRHNLSLNDCFVKVPRGPGNPGKGNYWALDPKCEDMFDNGSFLRRRKR 211



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SKPPYSY  LI  ++ ++  K+LTLS I  FI   + YY+     WQ
Sbjct: 115 SKPPYSYIALIAMSIINSPGKKLTLSEICEFIINRFEYYKEKFPAWQ 161


>gi|283464173|gb|ADB22670.1| fork-head box J2/3 transcription factor [Saccoglossus kowalevskii]
          Length = 361

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I +N+P+YR A  GW+
Sbjct: 63  DGKPPYSYANLITFAINSSPKKKMTLSEIYQWICENFPFYREAGNGWK 110



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 30/32 (93%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID
Sbjct: 111 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 142


>gi|115438536|ref|XP_001218091.1| forkhead box protein L2 [Aspergillus terreus NIH2624]
 gi|114188906|gb|EAU30606.1| forkhead box protein L2 [Aspergillus terreus NIH2624]
          Length = 723

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI-EQAFRRRRQRGVPCFRAP 160
           NSIRHNLSLN+ FIK  R +++PGKG++W I+PG E + + ++  RR     +P   AP
Sbjct: 254 NSIRHNLSLNKAFIKQERPKDDPGKGNYWAIEPGMEAQFLKDKPLRRATMSSLPLPAAP 312



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 36/52 (69%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           I  D +KPPYSYA LI  ++  A +++LTL+ IY +I+  + YY+ +D GWQ
Sbjct: 202 IEDDGTKPPYSYATLIGMSILRAPNRRLTLAQIYKWISDTFRYYKNSDAGWQ 253


>gi|88954261|gb|AAI14078.1| Forkhead box J3 [Bos taurus]
 gi|296488919|tpg|DAA31032.1| TPA: forkhead box J3 [Bos taurus]
          Length = 184

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 30/32 (93%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 155


>gi|6042185|gb|AAF02177.1| fork head domain DNA binding protein [Drosophila melanogaster]
          Length = 128

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 16  KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQ 61



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S
Sbjct: 62  NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDS 96


>gi|82706186|gb|ABB89477.1| forkhead transcription factor G [Strongylocentrotus purpuratus]
          Length = 185

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 35/47 (74%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            KPP+SY  LI+ A+ S+ +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 62  EKPPFSYNALIMMAIRSSPEKRLTLNGIYEYIMTNFPYYRENKQGWQ 108



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 41/74 (55%), Gaps = 15/74 (20%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI---EQAFRRRR--------- 150
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I       RRR          
Sbjct: 109 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRTTAASRNHRL 168

Query: 151 ---QRGVPCFRAPF 161
              +RGVP     F
Sbjct: 169 AQLKRGVPYMHGGF 182


>gi|258503961|gb|ACV72705.1| UNC-130 [Caenorhabditis remanei]
 gi|258503963|gb|ACV72706.1| UNC-130 [Caenorhabditis remanei]
 gi|258503973|gb|ACV72711.1| UNC-130 [Caenorhabditis remanei]
          Length = 286

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 34/50 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KVPR    PGKG++W +DP  E      +F RRR+R
Sbjct: 162 NSIRHNLSLNDCFVKVPRGPGNPGKGNYWALDPKCEDMFDNGSFLRRRKR 211



 Score = 47.0 bits (110), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 28/47 (59%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           SKPPYSY  LI  ++ ++  K+LTLS I  FI   + YY+     WQ
Sbjct: 115 SKPPYSYIALIAMSIINSPGKKLTLSEICEFIINRFEYYKEKFPAWQ 161


>gi|431891052|gb|ELK01930.1| Forkhead box protein C1 [Pteropus alecto]
          Length = 513

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 35  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 84



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 85  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 119


>gi|47214250|emb|CAG01927.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 363

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A++ D++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 42  KPPYSYIALISMAIANSPDRKLTLGGIYKFITERFPFYRDNSKKWQ 87



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  FIK+PR    PGKG++W +DP +E
Sbjct: 88  NSIRHNLTLNDCFIKIPREPGRPGKGNYWALDPNAE 123


>gi|268578883|ref|XP_002644424.1| C. briggsae CBR-FKH-2 protein [Caenorhabditis briggsae]
          Length = 279

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 37/51 (72%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S  + KPP+SY  LI+ A+ ++ +K+LTL+GIY +I  NYP+YR   +GWQ
Sbjct: 96  SSPNDKPPFSYNALIMMAIKNSPEKRLTLAGIYDYILTNYPFYRDNKQGWQ 146



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 32/40 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI 142
           NSIRHNLSLN+ F+KVPR+ ++PGKG++W +D   E ++ 
Sbjct: 147 NSIRHNLSLNKCFVKVPRNFDDPGKGNYWMLDATCEDEVF 186


>gi|410917956|ref|XP_003972452.1| PREDICTED: forkhead box protein E1-like [Takifugu rubripes]
          Length = 363

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A++ D++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 42  KPPYSYIALISMAIANSPDRKLTLGGIYKFITERFPFYRDNSKKWQ 87



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  FIK+PR    PGKG++W +DP +E
Sbjct: 88  NSIRHNLTLNDCFIKIPREPGRPGKGNYWALDPNAE 123


>gi|148224166|ref|NP_001089013.1| forkhead box protein E1 [Xenopus laevis]
 gi|82126092|sp|Q5J3Q5.1|FOXE1_XENLA RecName: Full=Forkhead box protein E1; Short=FoxE1
 gi|46198238|gb|AAS82575.1| FoxE1 [Xenopus laevis]
 gi|213625096|gb|AAI69811.1| FoxE5 [Xenopus laevis]
 gi|213626652|gb|AAI69809.1| FoxE5 [Xenopus laevis]
          Length = 379

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  ++A++ D++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 66  KPPYSYIALIAMSIANSADRKLTLGGIYKFITERFPFYRDNSKKWQ 111



 Score = 55.5 bits (132), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  FIK+PR    PGKG++W +DP +E
Sbjct: 112 NSIRHNLTLNDCFIKIPREPGRPGKGNYWALDPNAE 147


>gi|297289905|ref|XP_001119000.2| PREDICTED: forkhead box protein C1 [Macaca mulatta]
          Length = 444

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 167


>gi|291222693|ref|XP_002731348.1| PREDICTED: fork-head box J2/3 transcription factor [Saccoglossus
           kowalevskii]
          Length = 438

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I +N+P+YR A  GW+
Sbjct: 63  DGKPPYSYANLITFAINSSPKKKMTLSEIYQWICENFPFYREAGNGWK 110



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 30/32 (93%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID
Sbjct: 111 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 142


>gi|193788673|ref|NP_001123284.1| forkhead transcription factor G [Strongylocentrotus purpuratus]
 gi|167859074|gb|ACA04472.1| FoxG [Strongylocentrotus purpuratus]
          Length = 507

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 35/46 (76%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI+ A+ S+ +K+LTL+GIY +I  N+PYYR   +GWQ
Sbjct: 187 KPPFSYNALIMMAIRSSPEKRLTLNGIYEYIMTNFPYYRENKQGWQ 232



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 233 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 282


>gi|157427|gb|AAA28533.1| fork head domain DNA binding protein [Drosophila melanogaster]
          Length = 134

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPP+SY  LI  A++SA +++LTLSGIY FI   +PYYR   +GWQ
Sbjct: 16  KPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQ 61



 Score = 44.3 bits (103), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 7/49 (14%)

Query: 103 NSIRHNLSLNRYFIKVPRSQ------EEPGKGSFWRIDPGSEHKLIEQA 145
           NSIRHNLSLN  F+K+PR +      +  GKGS+W +D  S   + EQ 
Sbjct: 62  NSIRHNLSLNDCFVKIPRDKNTIEDNDSAGKGSYWMLD-SSASDMFEQG 109


>gi|334326044|ref|XP_001378806.2| PREDICTED: forkhead box protein C1 [Monodelphis domestica]
          Length = 579

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 73  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 122



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 123 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 166


>gi|260793272|ref|XP_002591636.1| hypothetical protein BRAFLDRAFT_223398 [Branchiostoma floridae]
 gi|229276845|gb|EEN47647.1| hypothetical protein BRAFLDRAFT_223398 [Branchiostoma floridae]
          Length = 86

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 2   DGKPPYSYANLITFAINSSPKKKMTLSEIYQWICDNFPYYRDAGNGWK 49



 Score = 46.2 bits (108), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 20/27 (74%), Positives = 25/27 (92%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGS 129
           NSIRHNLSLN+ F+KVPRS+++PGK S
Sbjct: 50  NSIRHNLSLNKCFLKVPRSKDDPGKVS 76


>gi|426351403|ref|XP_004043236.1| PREDICTED: forkhead box protein C1 [Gorilla gorilla gorilla]
          Length = 445

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 167


>gi|118101071|ref|XP_001234569.1| PREDICTED: transforming protein Qin-like [Gallus gallus]
          Length = 239

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPY+YA LI  A+ ++ +++L LSGIYS++   +PYYR   KGWQ
Sbjct: 16  KPPYTYAALIAMAIRASPEQRLPLSGIYSYVAGRFPYYRRGSKGWQ 61



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 31/50 (62%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+++PR    P +G  W +DP  +H      + RRR+R
Sbjct: 62  NSIRHNLSLNPCFLRLPRRSGAPHRGGEWALDPAFQHAFPGGDYCRRRRR 111


>gi|410225236|gb|JAA09837.1| forkhead box J3 [Pan troglodytes]
 gi|410260586|gb|JAA18259.1| forkhead box J3 [Pan troglodytes]
 gi|410306170|gb|JAA31685.1| forkhead box J3 [Pan troglodytes]
 gi|410336047|gb|JAA36970.1| forkhead box J3 [Pan troglodytes]
          Length = 588

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 30/32 (93%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 155


>gi|403260875|ref|XP_003922876.1| PREDICTED: forkhead box protein L1 [Saimiri boliviensis
           boliviensis]
          Length = 345

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 37/58 (63%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAP 160
           NSIRHNLSLN  F+KVPR +  PGKGS+W +DP          +RRR+++  P   AP
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAPGAP 152



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 31/46 (67%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  A ++++TL+GIY FI   +P+Y    +GWQ
Sbjct: 49  KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQ 94


>gi|384487534|gb|EIE79714.1| hypothetical protein RO3G_04419 [Rhizopus delemar RA 99-880]
          Length = 375

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 34/47 (72%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            KPPYSYA LI  A+ S+ D +LTLS IY +I++ YPYY+   KGWQ
Sbjct: 70  EKPPYSYATLIAHAILSSKDGRLTLSDIYQWISEVYPYYKKGVKGWQ 116



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 3/52 (5%)

Query: 95  KNGVFVDGNSIRHNLSLNR-YFIKVPR--SQEEPGKGSFWRIDPGSEHKLIE 143
           K GV    NSIRHNLSLN+ +F+K+ R  +Q  PGKG +W + P +E   +E
Sbjct: 109 KKGVKGWQNSIRHNLSLNKKWFVKLDRRPTQAHPGKGGYWTLRPMTEKLFVE 160


>gi|348521678|ref|XP_003448353.1| PREDICTED: forkhead box protein J3 isoform 2 [Oreochromis
           niloticus]
          Length = 570

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 60  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 107



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +    ++R + G
Sbjct: 108 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRPRSG 158


>gi|311893307|ref|NP_001185781.1| forkhead box protein J3 isoform 2 [Homo sapiens]
          Length = 588

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 36/47 (76%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +  ++    ++R
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKR 170


>gi|225111255|gb|ACN80999.1| forkhead box L2 [Crassostrea gigas]
          Length = 367

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 253 LHNRRNVSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLT 312
           +  ++  S  L   +  +A +  + N    +    + KPP+SY  LI  A+  + +K+LT
Sbjct: 91  VETKKIKSEKLEEKSKSSAGNVKIENENKYT--DPEQKPPFSYVALIAMAIKESSEKRLT 148

Query: 313 LSGIYSFITKNYPYYRTADKGWQ 335
           LSGIY FI   +PYY    KGWQ
Sbjct: 149 LSGIYQFIINKFPYYEKNKKGWQ 171



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 26/36 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLN  F+KVPR   E  KG+FW +DP  E
Sbjct: 172 NSIRHNLSLNECFVKVPREGGEERKGNFWTLDPAFE 207


>gi|194752089|ref|XP_001958355.1| GF23559 [Drosophila ananassae]
 gi|190625637|gb|EDV41161.1| GF23559 [Drosophila ananassae]
          Length = 508

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 70  KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQ 115



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDS 150


>gi|345780874|ref|XP_532540.3| PREDICTED: forkhead box protein J3 isoform 1 [Canis lupus
           familiaris]
          Length = 588

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 35/47 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +    ++R
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKR 170


>gi|119627571|gb|EAX07166.1| forkhead box J3, isoform CRA_b [Homo sapiens]
          Length = 382

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 36/47 (76%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +  ++    ++R
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKR 170


>gi|121712570|ref|XP_001273896.1| forkhead transcription factor (Sep1), putative [Aspergillus
           clavatus NRRL 1]
 gi|119402049|gb|EAW12470.1| forkhead transcription factor (Sep1), putative [Aspergillus
           clavatus NRRL 1]
          Length = 604

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 17/105 (16%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG-----VPCF 157
           NSIRHNLSLN+ FIK  R +++PGKG++W I+ G E + ++    RR         VPC 
Sbjct: 136 NSIRHNLSLNKAFIKQERPKDDPGKGNYWAIESGMEAQFLKDKPLRRATMSSLPLPVPCP 195

Query: 158 RAPFGLSSRCTLRFP------------STNIRLQFQSLVNESDPA 190
           R P  + S  T  +             S ++ L   + +  SDPA
Sbjct: 196 REPVHVQSSSTTNWAVPPAGHPTASKISKDVDLSSDATIPASDPA 240



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 36/52 (69%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           I  D SKPPYSYA LI  ++  A +++LTL+ IY +I+  + YY+ +D GWQ
Sbjct: 84  IEDDGSKPPYSYATLIGMSILRAPNRRLTLAQIYKWISDTFSYYKNSDPGWQ 135


>gi|432857929|ref|XP_004068796.1| PREDICTED: forkhead box protein J3-like, partial [Oryzias latipes]
          Length = 575

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 66  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 113



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 9/139 (6%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KV RS+++PGKGS+W ID   +   +    ++R + G      P+ 
Sbjct: 114 NSIRHNLSLNKCFLKVARSKDDPGKGSYWAIDTNPKEDALPTRPKKRPRSGERA-STPYS 172

Query: 163 LSSR-----CTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPPLR 217
           L S      C +   S +  L   ++ N+     T Q  S S    + N  +   L  + 
Sbjct: 173 LDSESLGMDCMISG-SASPTLAINTVTNKVALYNTEQEGSDSPRSSLNNSLSDQSLASVN 231

Query: 218 INIPD--HPHTEISSSPFP 234
           +N     H +T ++S P P
Sbjct: 232 LNSVSSVHSYTPVTSHPEP 250


>gi|354465370|ref|XP_003495153.1| PREDICTED: forkhead box protein L1-like [Cricetulus griseus]
 gi|344237998|gb|EGV94101.1| Forkhead box protein L1 [Cricetulus griseus]
          Length = 334

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 42/87 (48%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F+KVPR +  PGKGS+W +DP          +RRR+++  P   +P  
Sbjct: 93  NSIRHNLSLNECFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAAGSPEA 152

Query: 163 LSSRCTLRFPSTNIRLQFQSLVNESDP 189
             +R     P          L     P
Sbjct: 153 KRTRAEPPEPEVGCNAGCPGLATARPP 179



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++   KPPYSY  LI  A+  A ++++TL+GIY FI   +P+Y    +GWQ
Sbjct: 42  AEPPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQ 92


>gi|198474402|ref|XP_001356670.2| GA14117 [Drosophila pseudoobscura pseudoobscura]
 gi|198138376|gb|EAL33735.2| GA14117 [Drosophila pseudoobscura pseudoobscura]
          Length = 347

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F K+PRS ++PGKG++W +DP +E   I +   + R++
Sbjct: 183 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLRRK 232



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 35/51 (68%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S D  KPPYSY  LI+ A+  + +++LTL+GIY ++   +PY++   +GWQ
Sbjct: 132 SSDTKKPPYSYNALIMMAIQDSPEQRLTLNGIYQYLINRFPYFKANKRGWQ 182


>gi|156400206|ref|XP_001638891.1| predicted protein [Nematostella vectensis]
 gi|156226015|gb|EDO46828.1| predicted protein [Nematostella vectensis]
          Length = 101

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 34/47 (72%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            KP +SY  LI+ A+  + +K+LTLSGIY +I KN+PYYR   +GWQ
Sbjct: 1   EKPAFSYNALIMMAIRGSEEKRLTLSGIYEYIMKNFPYYRNNKQGWQ 47



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 39/53 (73%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVP 155
           NSIRHNLSLN+ F+KVPR+ ++PGKG++W +DP ++  +I     + ++R  P
Sbjct: 48  NSIRHNLSLNKCFVKVPRNYDDPGKGNYWMLDPSADDVIIGGTTGKLKRRNPP 100


>gi|149045264|gb|EDL98350.1| rCG44068 [Rattus norvegicus]
          Length = 526

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 35  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 84



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 85  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 119


>gi|148225712|ref|NP_001080963.1| forkhead box protein A4-A [Xenopus laevis]
 gi|51950260|gb|AAH82358.1| Pintallavis-a protein [Xenopus laevis]
          Length = 399

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 1/60 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRH+LS N  F+KVPRS E+PGKGS+W + P S + + E     RRQ+   C R+  G
Sbjct: 165 NSIRHSLSFNDCFVKVPRSPEKPGKGSYWTLHPESGN-MFENGCYLRRQKRFKCERSKSG 223



 Score = 50.8 bits (120), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  A +K +TL+ IY +I   +PYYR   + WQ
Sbjct: 118 AKPPYSYISLITMAIQQAPNKMMTLNEIYQWIIDLFPYYRQNQQRWQ 164


>gi|1655905|gb|AAD03479.1| XFD-1 [Xenopus laevis]
          Length = 399

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 1/60 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRH+LS N  F+KVPRS E+PGKGS+W + P S + + E     RRQ+   C R+  G
Sbjct: 165 NSIRHSLSFNDCFVKVPRSPEKPGKGSYWTLHPESGN-MFENGCYLRRQKRFKCERSKSG 223



 Score = 50.8 bits (120), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  A +K +TL+ IY +I   +PYYR   + WQ
Sbjct: 118 AKPPYSYISLITMAIQQAPNKMMTLNEIYQWIIDLFPYYRQNQQRWQ 164


>gi|195348545|ref|XP_002040809.1| GM22139 [Drosophila sechellia]
 gi|194122319|gb|EDW44362.1| GM22139 [Drosophila sechellia]
          Length = 507

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 70  KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQ 115



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDS 150


>gi|195147970|ref|XP_002014947.1| GL18682 [Drosophila persimilis]
 gi|194106900|gb|EDW28943.1| GL18682 [Drosophila persimilis]
          Length = 342

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F K+PRS ++PGKG++W +DP +E   I +   + R++
Sbjct: 178 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLRRK 227



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 35/51 (68%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S D  KPPYSY  LI+ A+  + +++LTL+GIY ++   +PY++   +GWQ
Sbjct: 127 SSDTKKPPYSYNALIMMAIQDSPEQRLTLNGIYQYLINRFPYFKANKRGWQ 177


>gi|195592146|ref|XP_002085797.1| GD12117 [Drosophila simulans]
 gi|194197806|gb|EDX11382.1| GD12117 [Drosophila simulans]
          Length = 491

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 70  KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQ 115



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDS 150


>gi|114152805|sp|P33205.3|FXA4A_XENLA RecName: Full=Forkhead box protein A4-A; Short=FoxA4-A;
           Short=FoxA4a; AltName: Full=Fork head domain-related
           protein 1; Short=xFD-1; AltName: Full=Protein
           pintallavis
          Length = 399

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 1/60 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRH+LS N  F+KVPRS E+PGKGS+W + P S + + E     RRQ+   C R+  G
Sbjct: 165 NSIRHSLSFNDCFVKVPRSPEKPGKGSYWTLHPESGN-MFENGCYLRRQKRFKCERSKSG 223



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  A +K +TL+ IY +I   +PYYR   + WQ
Sbjct: 118 AKPPYSYISLITMAIQQAPNKMMTLNEIYQWIIDLFPYYRQNQQRWQ 164


>gi|185135199|ref|NP_001117956.1| Foxl2 diverged paralog [Oncorhynchus mykiss]
 gi|46277674|gb|AAS87039.1| Foxl2 diverged paralog [Oncorhynchus mykiss]
          Length = 296

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 31/46 (67%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  + +K+LTLSGIY FI   +PYY    KGWQ
Sbjct: 54  KPPYSYVALIAMAIKESREKRLTLSGIYQFIISKFPYYEKNKKGWQ 99



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 25/36 (69%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLN  F+KVPR      KG+FW +DP  E
Sbjct: 100 NSIRHNLSLNECFLKVPREGGGDRKGNFWTLDPAFE 135


>gi|443713120|gb|ELU06126.1| hypothetical protein CAPTEDRAFT_137131 [Capitella teleta]
          Length = 144

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TL+ IY +I +N+PYY+ A  GW+
Sbjct: 69  DGKPPYSYANLITFAINSSTKKKMTLAEIYQWICENFPYYKEAGNGWK 116



 Score = 46.2 bits (108), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 24/25 (96%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGK 127
           NSIRHNLSLN+ F+KVPRS+++PGK
Sbjct: 117 NSIRHNLSLNKCFLKVPRSKDDPGK 141


>gi|33874209|gb|AAH14182.1| FOXJ3 protein, partial [Homo sapiens]
          Length = 382

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/32 (75%), Positives = 30/32 (93%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAID 155


>gi|17975538|ref|NP_524202.1| crocodile [Drosophila melanogaster]
 gi|2506416|sp|P32027.2|CROC_DROME RecName: Full=Fork head domain-containing protein crocodile;
           AltName: Full=FKH protein FD1
 gi|1245868|gb|AAB35643.1| crocodile [Drosophila melanogaster]
 gi|7296440|gb|AAF51727.1| crocodile [Drosophila melanogaster]
 gi|25012922|gb|AAN71548.1| RH24787p [Drosophila melanogaster]
 gi|220942506|gb|ACL83796.1| croc-PA [synthetic construct]
 gi|220952722|gb|ACL88904.1| croc-PA [synthetic construct]
          Length = 508

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 70  KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQ 115



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDS 150


>gi|195476929|ref|XP_002086269.1| GE22970 [Drosophila yakuba]
 gi|194186059|gb|EDW99670.1| GE22970 [Drosophila yakuba]
          Length = 507

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 70  KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQ 115



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDS 150


>gi|74143021|dbj|BAE42529.1| unnamed protein product [Mus musculus]
 gi|74194473|dbj|BAE37284.1| unnamed protein product [Mus musculus]
          Length = 155

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 19/25 (76%), Positives = 24/25 (96%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGK 127
           NSIRHNLSLN+ F+KVPRS+++PGK
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGK 148


>gi|115292193|emb|CAL47033.1| forkhead box protein c2 [Amia calva]
          Length = 157

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 37/57 (64%)

Query: 279 HMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           H   +  +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 59  HHQQTAPKDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQ 115



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVPRDDKKPGKGSYWCLDPDS 150


>gi|383862109|ref|XP_003706526.1| PREDICTED: forkhead box protein J1-B-like [Megachile rotundata]
          Length = 282

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 30/32 (93%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F+K+PRS++EPGKG FW++D
Sbjct: 143 NSIRHNLSLNKCFVKLPRSKDEPGKGGFWKLD 174



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 12/77 (15%)

Query: 259 VSADLHMAAHYAAAHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYS 318
           + A+L +AA+     T+            D+KPP+SYA +I  A+  A++ +++LS IY+
Sbjct: 78  IKAELDLAANAEKYRTDP-----------DAKPPFSYATIICLAM-RANNNKVSLSNIYA 125

Query: 319 FITKNYPYYRTADKGWQ 335
           +I +N+ +Y+ AD  WQ
Sbjct: 126 WIRENFLFYKYADPAWQ 142


>gi|274133299|emb|CBI70344.1| forkhead box C protein [Patella vulgata]
          Length = 110

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 38/52 (73%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +S+D  KPPYSY  LI  A+ S+ +K++TL+GIY+FI   +P+YR   +GWQ
Sbjct: 25  MSKDMVKPPYSYIALIAMAIQSSPEKRVTLNGIYAFIMDRFPFYRENKQGWQ 76



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/33 (66%), Positives = 28/33 (84%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDP 135
           NSIRHNLSLN  F+K+PR  ++PGKGS+W +DP
Sbjct: 77  NSIRHNLSLNECFMKIPRDDKKPGKGSYWTLDP 109


>gi|195032360|ref|XP_001988485.1| GH11193 [Drosophila grimshawi]
 gi|193904485|gb|EDW03352.1| GH11193 [Drosophila grimshawi]
          Length = 340

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F K+PRS ++PGKG++W +DP +E   I +   + R++
Sbjct: 172 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLRRK 221



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 35/51 (68%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S D  KPPYSY  LI+ A+  + +++LTL+GIY ++   +PY++   +GWQ
Sbjct: 121 SNDTKKPPYSYNALIMMAIQDSAEQRLTLNGIYQYLINRFPYFKANKRGWQ 171


>gi|270006433|gb|EFA02881.1| sloppy-paired 2 [Tribolium castaneum]
          Length = 444

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I     + R+R
Sbjct: 262 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGTTGKLRRR 311



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 33/43 (76%)

Query: 293 YSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           YSY  LI+ A+ ++ +K+LTL+GIY +I +N+PYYR   +GWQ
Sbjct: 219 YSYNALIMMAIRNSPEKRLTLNGIYEYIMRNFPYYRENKQGWQ 261


>gi|194875600|ref|XP_001973629.1| GG13233 [Drosophila erecta]
 gi|190655412|gb|EDV52655.1| GG13233 [Drosophila erecta]
          Length = 507

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A DK++TL+GIY +I + +PYYR   +GWQ
Sbjct: 70  KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQ 115



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 28/35 (80%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KV R  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDS 150


>gi|148700417|gb|EDL32364.1| mCG11671 [Mus musculus]
          Length = 325

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 158


>gi|64984|emb|CAA46290.1| pintallavis [Xenopus laevis]
          Length = 399

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 1/60 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRH+LS N  F+KVPRS E+PGKGS+W + P S + + E     RRQ+   C R+  G
Sbjct: 165 NSIRHSLSFNDCFVKVPRSPEKPGKGSYWTLHPESGN-MFENGCYLRRQKRFKCERSKSG 223



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  A +K +TL+ IY +I   +PYYR   + WQ
Sbjct: 118 AKPPYSYISLITMAIQQAPNKMMTLNEIYQWIIDLFPYYRQNQQRWQ 164


>gi|308511633|ref|XP_003117999.1| CRE-FKH-2 protein [Caenorhabditis remanei]
 gi|308238645|gb|EFO82597.1| CRE-FKH-2 protein [Caenorhabditis remanei]
          Length = 278

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 37/51 (72%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S  + KPP+SY  LI+ A+ ++ +K+LTL+GIY +I  NYP+YR   +GWQ
Sbjct: 95  SSPNDKPPFSYNALIMMAIKNSPEKRLTLAGIYEYILTNYPFYRDNKQGWQ 145



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 1/51 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKL-IEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR+ ++PGKG++W +D   E ++ I  A  + R+R
Sbjct: 146 NSIRHNLSLNKCFVKVPRNFDDPGKGNYWMLDATCEDEVFIGGATGKLRRR 196


>gi|119627572|gb|EAX07167.1| forkhead box J3, isoform CRA_c [Homo sapiens]
          Length = 188

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWK 123



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 36/47 (76%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +  ++    ++R
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDVLPTRPKKR 170


>gi|49257792|gb|AAH74713.1| forkhead box J2 [Xenopus (Silurana) tropicalis]
          Length = 489

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ SA  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 34  DGKPPYSYANLIQYAINSAPAKRMTLSEIYRWICDNFPYYRNAGVGWK 81



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 28/32 (87%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F KVPR +++PGKGS+W ID
Sbjct: 82  NSIRHNLSLNKCFRKVPRPRDDPGKGSYWMID 113


>gi|315049153|ref|XP_003173951.1| forkhead box protein [Arthroderma gypseum CBS 118893]
 gi|311341918|gb|EFR01121.1| forkhead box protein [Arthroderma gypseum CBS 118893]
          Length = 813

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query: 279 HMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           H    +  D SKPPYSYA LI  A+  A +++LTLS IY +I+ N+ +YR  D GWQ
Sbjct: 275 HEMPPVEDDGSKPPYSYAILIGMAILRATNRRLTLSQIYKWISDNFAFYRAGDFGWQ 331



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI-EQAFRR 148
           + G F   NSIRHNLSL++ FIK  R +++PGKG +W I+PG E + + ++ FR+
Sbjct: 324 RAGDFGWQNSIRHNLSLHKAFIKQERPKDDPGKGHYWVIEPGMEGQFLKDKPFRK 378


>gi|349501020|ref|NP_001005675.2| forkhead box protein J2 [Xenopus (Silurana) tropicalis]
 gi|118574793|sp|Q28EM1.1|FOXJ2_XENTR RecName: Full=Forkhead box protein J2; AltName: Full=XtFoxJ2;
           Short=FoxJ2
 gi|89271350|emb|CAJ83450.1| forkhead box J2 [Xenopus (Silurana) tropicalis]
          Length = 512

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ SA  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 57  DGKPPYSYANLIQYAINSAPAKRMTLSEIYRWICDNFPYYRNAGVGWK 104



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 28/32 (87%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F KVPR +++PGKGS+W ID
Sbjct: 105 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWMID 136


>gi|348529526|ref|XP_003452264.1| PREDICTED: forkhead box protein E1-like [Oreochromis niloticus]
          Length = 366

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A++ D++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 42  KPPYSYIALISMAIANSPDRKLTLGGIYKFITERFPFYRDNSKKWQ 87



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  FIK+PR    PGKG++W +DP +E
Sbjct: 88  NSIRHNLTLNDCFIKIPREPGRPGKGNYWALDPNAE 123


>gi|410899633|ref|XP_003963301.1| PREDICTED: forkhead box protein J3-like [Takifugu rubripes]
          Length = 614

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +    ++R + G
Sbjct: 124 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTVPSRPKKRPRSG 174



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 33/48 (68%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+  +  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 76  DGKPPYSYASLITFAINGSQRKRMTLSEIYQWICDNFPYYREAGSGWK 123


>gi|345308141|ref|XP_003428664.1| PREDICTED: hypothetical protein LOC100681917 [Ornithorhynchus
           anatinus]
          Length = 778

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 458 KDMVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRDNKQGWQ 507



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 508 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 542


>gi|47211273|emb|CAF96645.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 342

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 37/51 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRG 153
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +    ++R + G
Sbjct: 121 NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTVPSRPKKRPRSG 171



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 33/48 (68%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+  +  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 73  DGKPPYSYASLITFAINGSPRKRMTLSEIYQWICDNFPYYREAGSGWK 120


>gi|354459055|ref|NP_001121266.2| forkhead box protein J2 [Xenopus laevis]
          Length = 512

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ SA  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 57  DGKPPYSYANLIQYAINSAPAKRMTLSEIYRWICDNFPYYRNAGVGWK 104



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 28/32 (87%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F KVPR +++PGKGS+W ID
Sbjct: 105 NSIRHNLSLNKCFRKVPRPRDDPGKGSYWMID 136


>gi|238054015|ref|NP_001153928.1| forkhead box E1 [Oryzias latipes]
 gi|226441721|gb|ACO57463.1| forkhead box E1 [Oryzias latipes]
          Length = 361

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+A++ D++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 42  KPPYSYIALISMAIANSPDRKLTLGGIYKFITERFPFYRDNSKKWQ 87



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  FIK+PR    PGKG++W +DP +E
Sbjct: 88  NSIRHNLTLNDCFIKIPREPGRPGKGNYWALDPNAE 123


>gi|3170417|gb|AAC18081.1| transcription factor forkhead-like 7 [Homo sapiens]
          Length = 553

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 167


>gi|115528269|gb|AAI24873.1| LOC100158348 protein [Xenopus laevis]
          Length = 489

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 34/48 (70%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ SA  K++TLS IY +I  N+PYYR A  GW+
Sbjct: 34  DGKPPYSYANLIQYAINSAPAKRMTLSEIYRWICDNFPYYRNAGVGWK 81



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 28/32 (87%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRID 134
           NSIRHNLSLN+ F KVPR +++PGKGS+W ID
Sbjct: 82  NSIRHNLSLNKCFRKVPRPRDDPGKGSYWMID 113


>gi|431917817|gb|ELK17051.1| Forkhead box protein G1 [Pteropus alecto]
          Length = 533

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 16  NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 65


>gi|285157620|gb|ADC35031.1| fox/forkhead [Capitella teleta]
          Length = 381

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  ++ S  DK++TL+GIY FI   +PYYR   +GWQ
Sbjct: 5   KDMVKPPYSYIALIAMSIMSQPDKKITLNGIYQFIMDRFPYYRENKQGWQ 54



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSL+  F+K+PR  ++PGKGS+W +DP S
Sbjct: 55  NSIRHNLSLSECFVKIPRDDKKPGKGSYWTLDPDS 89


>gi|195435021|ref|XP_002065500.1| GK15483 [Drosophila willistoni]
 gi|194161585|gb|EDW76486.1| GK15483 [Drosophila willistoni]
          Length = 346

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F K+PRS ++PGKG++W +DP +E   I +   + R++
Sbjct: 186 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLRRK 235



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 42/64 (65%)

Query: 272 AHTNVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTAD 331
           A+ +    +S + + D+ KPPYSY  LI+ A+  + +++LTL+GIY ++   +PY++   
Sbjct: 122 ANPSKKQKLSSNAANDNKKPPYSYNALIMMAIQDSPEQRLTLNGIYQYLINRFPYFKANK 181

Query: 332 KGWQ 335
           +GWQ
Sbjct: 182 RGWQ 185


>gi|17569837|ref|NP_508644.1| Protein FKH-2, isoform a [Caenorhabditis elegans]
 gi|351019389|emb|CCD62370.1| Protein FKH-2, isoform a [Caenorhabditis elegans]
          Length = 270

 Score = 61.2 bits (147), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 36/51 (70%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S  + KPP+SY  LI+ A+  + +K+LTL+GIY +I  NYP+YR   +GWQ
Sbjct: 88  SSPNDKPPFSYNALIMMAIKDSPEKRLTLAGIYEYIVTNYPFYRDNKQGWQ 138



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 33/40 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI 142
           NSIRHNLSLN+ F+KVPR+ ++PGKG++W +D  +E ++ 
Sbjct: 139 NSIRHNLSLNKCFVKVPRNFDDPGKGNYWMLDATAEDEVF 178


>gi|30143280|gb|AAP15181.1| forkhead winged/helix transcription factor mutant 2 [Homo sapiens]
          Length = 553

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/44 (59%), Positives = 33/44 (75%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +K    +F
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNKFENGSF 167


>gi|45360531|ref|NP_988938.1| forkhead box protein A4 [Xenopus (Silurana) tropicalis]
 gi|82186598|sp|Q6P839.1|FOXA4_XENTR RecName: Full=Forkhead box protein A4; Short=FoxA4
 gi|38174738|gb|AAH61392.1| forkhead box A4 [Xenopus (Silurana) tropicalis]
 gi|89268761|emb|CAJ81986.1| novel forkhead box A family protein [Xenopus (Silurana) tropicalis]
          Length = 399

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 1/60 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRH+LS N  F+KVPRS E+PGKGS+W + P S + + E     RRQ+   C R+  G
Sbjct: 165 NSIRHSLSFNDCFVKVPRSPEKPGKGSYWTLHPESGN-MFENGCYLRRQKRFKCERSKSG 223



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  A +K +TL+ IY +I   +PYYR   + WQ
Sbjct: 118 AKPPYSYISLITMAIQQAPNKMMTLNEIYQWIIDLFPYYRQNQQRWQ 164


>gi|383853176|ref|XP_003702099.1| PREDICTED: uncharacterized protein LOC100878921 [Megachile
           rotundata]
          Length = 484

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 35/124 (28%)

Query: 247 PTSPRGLHN-----RRNVSADLHMAAHYAAAHTN---VVNHMSLSIS----QDDS----- 289
           P++PRG  +     +    A LH+    + AH N   VV    LS+S    QD S     
Sbjct: 8   PSTPRGTVDSTRIMKNESDASLHLPDQTSVAHANSASVVPRTGLSMSSNSNQDQSLDPLM 67

Query: 290 ------------------KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTAD 331
                             KPPYSY  LIV A+ S+  K+LTLS IYSF+ +++P++R A 
Sbjct: 68  CNPSSTELPRKPGARRQEKPPYSYIALIVMAIQSSPGKRLTLSEIYSFLQQHFPFFRGAY 127

Query: 332 KGWQ 335
           +GW+
Sbjct: 128 QGWK 131



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/41 (56%), Positives = 29/41 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIE 143
           NS+RHNLSLN  FIK+P+    PGKG +W IDP +E+   E
Sbjct: 132 NSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPSTEYMFEE 172


>gi|410933080|ref|XP_003979920.1| PREDICTED: forkhead box C1-A-like, partial [Takifugu rubripes]
          Length = 307

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ ++ DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 52  KDMVKPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQ 101



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 102 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 136


>gi|218675730|gb|AAI69306.2| forkhead box C1 [synthetic construct]
          Length = 310

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.2 bits (139), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 158


>gi|321477591|gb|EFX88549.1| hypothetical protein DAPPUDRAFT_28765 [Daphnia pulex]
          Length = 101

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+K+PR    PGKG++W +DP +E      +F RRR+R
Sbjct: 49  NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPMAEDMFDNGSFLRRRKR 98



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 28/46 (60%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ S   K+LTLSGI  FI   +PYYR     WQ
Sbjct: 3   KPPYSYIALITMAILSNPHKKLTLSGICEFIMNRFPYYRDRFPAWQ 48


>gi|193605824|ref|XP_001942631.1| PREDICTED: hypothetical protein LOC100164522 [Acyrthosiphon pisum]
          Length = 395

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+K+PRS ++PGKG++W IDP S    I     + R+R
Sbjct: 192 NSIRHNLSLNKCFVKIPRSFDDPGKGNYWMIDPNSSDVYIGGTTGKLRRR 241



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +   + KP YSY  LI+ A++ +  K+LTLSGIY +I   +P+YR     WQ
Sbjct: 140 VDDKNKKPNYSYNALIMMAISESPQKRLTLSGIYEYIMNKFPFYRMNTPAWQ 191


>gi|117606397|ref|NP_001071091.1| sloppy-paired [Tribolium castaneum]
 gi|115498173|gb|ABD63010.2| sloppy-paired [Tribolium castaneum]
          Length = 311

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA 159
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP +E   I     + R+R     R+
Sbjct: 129 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGTTGKLRRRSTAASRS 185



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 33/43 (76%)

Query: 293 YSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           YSY  LI+ A+ ++ +K+LTL+GIY +I +N+PYYR   +GWQ
Sbjct: 86  YSYNALIMMAIRNSPEKRLTLNGIYEYIMRNFPYYRENKQGWQ 128


>gi|242129235|gb|ACS83750.1| forkhead box C1 [Homo sapiens]
          Length = 555

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 167


>gi|260815064|ref|XP_002602294.1| hypothetical protein BRAFLDRAFT_228090 [Branchiostoma floridae]
 gi|229287602|gb|EEN58306.1| hypothetical protein BRAFLDRAFT_228090 [Branchiostoma floridae]
          Length = 107

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 34/46 (73%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ ++ +++ TL+GIY FI  ++PYYR AD+ WQ
Sbjct: 12  KPPYSYVALITMAIVNSPERKTTLAGIYKFIMDHFPYYREADRKWQ 57



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNL+LN  F+K+ R    PGKGS W +DPG+E      ++ RRR R
Sbjct: 58  NSIRHNLTLNDCFVKLARHPNRPGKGSLWALDPGAEGMFDNGSYLRRRSR 107


>gi|259013273|ref|NP_001158426.1| forkhead box A [Saccoglossus kowalevskii]
 gi|196475491|gb|ACG76356.1| forkhead box A protein [Saccoglossus kowalevskii]
          Length = 404

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 4/68 (5%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRH+LS N  F+KVPR+ + PGKGSFW + P S +      + RR++R    F+ P  
Sbjct: 173 NSIRHSLSFNDCFLKVPRTPDRPGKGSFWTLHPDSGNMFENGCYLRRQKR----FKCPKR 228

Query: 163 LSSRCTLR 170
            + R T R
Sbjct: 229 EAQRVTQR 236



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 31/47 (65%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+ S+ +K +TLS IY FI   +P+YR   + WQ
Sbjct: 126 AKPPYSYISLITMAIQSSPNKMVTLSDIYQFIMDLFPFYRQNQQRWQ 172


>gi|119395716|ref|NP_001444.2| forkhead box protein C1 [Homo sapiens]
 gi|13638267|sp|Q12948.3|FOXC1_HUMAN RecName: Full=Forkhead box protein C1; AltName:
           Full=Forkhead-related protein FKHL7; AltName:
           Full=Forkhead-related transcription factor 3;
           Short=FREAC-3
 gi|119575478|gb|EAW55074.1| forkhead box C1 [Homo sapiens]
          Length = 553

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 167


>gi|3228522|gb|AAC24209.1| mesoderm/mesenchyme forkhead 1 [Mus musculus]
          Length = 553

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 158


>gi|3859930|gb|AAC72915.1| forkhead/winged helix-like transcription factor 7 [Homo sapiens]
          Length = 553

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 167


>gi|344292314|ref|XP_003417873.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein C1-like
           [Loxodonta africana]
          Length = 552

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 75  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 124



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 125 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 168


>gi|196166493|gb|ACG70805.1| forkhead transcrition factor FoxA [Convolutriloba longifissura]
          Length = 659

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRH+LS N  F+KVPR+ E+PGKGSFW + P S +      + RR++R
Sbjct: 203 NSIRHSLSFNDCFVKVPRTPEKPGKGSFWTLHPESGNMFENGCYLRRQKR 252



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 37/53 (69%)

Query: 283 SISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           S SQ  +KPPYSY  LI  A+ +++++ +TLS IYSFI + +PYYR   + WQ
Sbjct: 150 SYSQSHAKPPYSYISLITMAIQNSNNRMVTLSDIYSFIMELFPYYRQNQQRWQ 202


>gi|410923745|ref|XP_003975342.1| PREDICTED: forkhead box C1-A-like [Takifugu rubripes]
          Length = 573

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ ++ DK++TL+GIY FI + +P+YR   +GWQ
Sbjct: 173 KDMVKPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQ 222



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 223 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 257


>gi|307192426|gb|EFN75642.1| Fork head domain-containing protein crocodile [Harpegnathos
           saltator]
          Length = 435

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A +K++TL+GIY FI + +PYYR   +GWQ
Sbjct: 66  KDMVKPPYSYIALIAMAIQNAPEKKITLNGIYQFIMERFPYYRENKQGWQ 115



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 116 NSIRHNLSLNECFVKVPRDDKKPGKGSYWSLDPDS 150


>gi|50345972|ref|NP_032618.2| forkhead box protein C1 [Mus musculus]
 gi|341941095|sp|Q61572.3|FOXC1_MOUSE RecName: Full=Forkhead box protein C1; AltName:
           Full=Forkhead-related protein FKHL7; AltName:
           Full=Forkhead-related transcription factor 3;
           Short=FREAC-3; AltName: Full=Mesoderm/mesenchyme
           forkhead 1; Short=MF-1; AltName: Full=Transcription
           factor FKH-1
 gi|3805941|emb|CAA11239.1| FKH1/MF1 protein [Mus musculus]
 gi|30354119|gb|AAH52011.1| Forkhead box C1 [Mus musculus]
 gi|74190395|dbj|BAE25882.1| unnamed protein product [Mus musculus]
          Length = 553

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 158


>gi|405949951|gb|EKC17961.1| Forkhead box protein L1 [Crassostrea gigas]
          Length = 385

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+KV R + +PGKG++W +DP  E       +RRR++R
Sbjct: 116 NSIRHNLSLNDCFVKVAREKGKPGKGNYWTLDPNCEEMFENGNYRRRKRR 165



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 33/46 (71%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+ +A D+++TL+GIY FI + +PYY    +GWQ
Sbjct: 70  KPPYSYIALIAMAIKNAPDRKITLNGIYQFIMERFPYYHDNKQGWQ 115


>gi|126632009|gb|AAI34422.1| FOXC1 protein [Homo sapiens]
          Length = 212

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 167


>gi|238054001|ref|NP_001153921.1| forkhead box B1.2 [Oryzias latipes]
 gi|226441705|gb|ACO57455.1| forkhead box B1.2 [Oryzias latipes]
          Length = 313

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLS N  FIK+PR  ++PGKGSFW + P         +F RRR+R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPNCGDMFENGSFLRRRKR 108



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 28/48 (58%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY  L   A+ S  +K L LS IY FI   +PYYR   + WQ
Sbjct: 11  DQKPPYSYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQ 58


>gi|430812277|emb|CCJ30305.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 531

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 3/66 (4%)

Query: 88  FFMTCNGKNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           F   CN  +G     NSIRHNLSLN+ F+K  R ++EPGKG++W I+PG E + ++   R
Sbjct: 191 FEYYCNNDSGW---QNSIRHNLSLNKAFVKQERPKDEPGKGNYWTIEPGYEFQFMKGRTR 247

Query: 148 RRRQRG 153
           +    G
Sbjct: 248 KNISSG 253



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 34/52 (65%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           I  D  KPPYSYA LI  A+  A  ++LTLS IY++I++ + YY   D GWQ
Sbjct: 151 IEDDGQKPPYSYATLIGMAILRAPQRRLTLSAIYNWISQTFEYYCNNDSGWQ 202


>gi|403310668|ref|NP_599165.1| forkhead box protein C1 [Rattus norvegicus]
          Length = 553

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 158


>gi|406606633|emb|CCH42005.1| Fork head protein [Wickerhamomyces ciferrii]
          Length = 752

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query: 279 HMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +M + + + D+KPPYSYA LI  A+     ++LTLS IYS+I+  + YYR  D GWQ
Sbjct: 210 NMPVIVHESDTKPPYSYATLIGMAILRGEGRKLTLSQIYSWISSTFKYYRRNDVGWQ 266



 Score = 44.3 bits (103), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 31/111 (27%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ FIK  +S +  GKG +W I  G E + +      R + G   F     
Sbjct: 267 NSIRHNLSLNKAFIKTDKSSD--GKGHYWEIVKGHEIQFV------RGKNGKKTF----- 313

Query: 163 LSSRCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLL 213
                      TNI+ +     ++S PAP  + +      V  NP+T+  L
Sbjct: 314 -----------TNIQFE----ASKSTPAPKPEKLQEP---VQTNPSTNKRL 346


>gi|164425282|ref|XP_962742.2| hypothetical protein NCU06173 [Neurospora crassa OR74A]
 gi|157070864|gb|EAA33506.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 806

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 37/47 (78%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN++FIK  R +++PGKG++W I+PG+E   +++   R+
Sbjct: 255 NSIRHNLSLNKHFIKQERPKDDPGKGNYWAIEPGAEQFFMKEKPSRK 301



 Score = 48.1 bits (113), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 34/52 (65%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           I  D +KP +SYA LI  A+  +  ++LTLS IY +I + + +Y+ +D GWQ
Sbjct: 203 IIDDGTKPHHSYATLIGMAILRSPQRRLTLSQIYKWIAETFSFYQLSDSGWQ 254


>gi|311737|emb|CAA50741.1| fkh-1 [Mus musculus]
          Length = 111

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 6   KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 55



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S
Sbjct: 56  NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDS 90


>gi|336174371|dbj|BAK40075.1| folkhead transcription factor FoxA2 [Takifugu niphobles]
          Length = 414

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/64 (46%), Positives = 38/64 (59%), Gaps = 1/64 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRH+LS N  F+KVPRS ++PGKGSFW + P S   + E     RRQ+   C +    
Sbjct: 195 NSIRHSLSFNDCFVKVPRSPDKPGKGSFWTLHPDSG-NMFENGCYLRRQKRFKCDKKTMK 253

Query: 163 LSSR 166
             SR
Sbjct: 254 DGSR 257



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 29/47 (61%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  +  K LTL+ IY +I   +P+YR   + WQ
Sbjct: 148 AKPPYSYISLITMAIQQSPSKMLTLAEIYQWIMDLFPFYRQNQQRWQ 194


>gi|302308336|ref|NP_985225.2| AER369Cp [Ashbya gossypii ATCC 10895]
 gi|299789406|gb|AAS53049.2| AER369Cp [Ashbya gossypii ATCC 10895]
 gi|374108450|gb|AEY97357.1| FAER369Cp [Ashbya gossypii FDAG1]
          Length = 713

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 41/59 (69%), Gaps = 3/59 (5%)

Query: 280 MSLSISQDDS---KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++  +S+D++   KPP+SYA +I QA+ S+ D +L+LS IY +I+ NY +YR    GWQ
Sbjct: 246 LATDLSRDENRNVKPPHSYATMITQAILSSQDGELSLSAIYKYISTNYAFYRHTKSGWQ 304



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/42 (57%), Positives = 29/42 (69%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQ 144
           NSIRHNLSLN+ F KVPR   EPGKG  WRI    + + +E+
Sbjct: 305 NSIRHNLSLNKAFEKVPRKPGEPGKGMKWRISEEYQREFLEK 346



 Score = 41.6 bits (96), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 35 AIAKLQGREFEYMVRQKRITIGRNSSRGD--VDVNMGLSSFISRRHIEIFF 83
          A AK+ GR++ Y V+    +IGRN+S  D  V +++G +  +SR+H  I F
Sbjct: 47 AYAKISGRDWTYYVKDMMTSIGRNTSPQDRSVHIDLGPAKVVSRQHASISF 97


>gi|302502011|ref|XP_003012997.1| forkhead transcription factor (Sep1), putative [Arthroderma
           benhamiae CBS 112371]
 gi|291176558|gb|EFE32357.1| forkhead transcription factor (Sep1), putative [Arthroderma
           benhamiae CBS 112371]
          Length = 825

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query: 279 HMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           H    +  D SKPPYSYA LI  A+  A +++LTLS IY +I+ N+ +YR  D GWQ
Sbjct: 286 HEMPPVEDDGSKPPYSYAILIGMAILRATNRRLTLSQIYKWISDNFAFYRAGDFGWQ 342



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 21/132 (15%)

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI-EQAFRR----- 148
           + G F   NSIRHNLSL++ FIK  R +++PGKG +W I+PG E + + ++ FR+     
Sbjct: 335 RAGDFGWQNSIRHNLSLHKAFIKQERPKDDPGKGHYWIIEPGMEGQFLKDKPFRKAPIMS 394

Query: 149 -----RRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQ----FQSLVNESD---PAPTGQSV 196
                + Q  VP    P     +  L  PS+N  L       S   ES    PA   Q +
Sbjct: 395 TIPASQPQSAVP---PPLSTPKQPDLPPPSSNTGLSTINYLPSTTAESQDVAPASNLQDL 451

Query: 197 SSSGVGVMGNPA 208
           SS       +PA
Sbjct: 452 SSDATLPASDPA 463


>gi|118343788|ref|NP_001071714.1| transcription factor protein [Ciona intestinalis]
 gi|70569616|dbj|BAE06444.1| transcription factor protein [Ciona intestinalis]
          Length = 560

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 35/48 (72%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI  A+ S+++K++TLS IY +I K +PYY  A  GW+
Sbjct: 74  DGKPPYSYASLISLAINSSNEKKMTLSEIYQWICKTFPYYSGAGTGWK 121



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 5/77 (6%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN+ F+KVPR++++PGKGS+W ID   +   I       R RG+     P  
Sbjct: 122 NSIRHNLSLNKCFMKVPRAKDDPGKGSYWAIDSNPQEDPI-----LSRPRGIKRKARPGD 176

Query: 163 LSSRCTLRFPSTNIRLQ 179
           +       F S+N  +Q
Sbjct: 177 MGVYEDNSFHSSNDSIQ 193


>gi|405974198|gb|EKC38861.1| Forkhead box protein L2 [Crassostrea gigas]
          Length = 415

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 32/48 (66%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           + KPP+SY  LI  A+  + +K+LTLSGIY FI   +PYY    KGWQ
Sbjct: 124 EQKPPFSYVALIAMAIKESSEKRLTLSGIYQFIINKFPYYEKNKKGWQ 171



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/36 (61%), Positives = 25/36 (69%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNLSLN  F+KVPR      KG+FW +DP  E
Sbjct: 172 NSIRHNLSLNECFVKVPREGGGERKGNFWTLDPAFE 207


>gi|397499975|ref|XP_003820705.1| PREDICTED: forkhead box protein E1 [Pan paniscus]
          Length = 253

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 33/47 (70%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            KPPYSY  LI  A+A A +++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 52  GKPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQ 98



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  F+K+PR    PGKG++W +DP +E
Sbjct: 99  NSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAE 134


>gi|194758645|ref|XP_001961572.1| GF15038 [Drosophila ananassae]
 gi|190615269|gb|EDV30793.1| GF15038 [Drosophila ananassae]
          Length = 350

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 37/50 (74%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F K+PRS ++PGKG++W +DP +E   I +   + R++
Sbjct: 177 NSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLRRK 226



 Score = 57.8 bits (138), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 275 NVVNHMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGW 334
           N      +S   D+ KPPYSY  LI+ A+  + +++LTL+GIY ++   +PY++   +GW
Sbjct: 116 NPSKKQKVSSGADNKKPPYSYNALIMMAIQDSPEQRLTLNGIYQYLINRFPYFKANKRGW 175

Query: 335 Q 335
           Q
Sbjct: 176 Q 176


>gi|167560887|ref|NP_001107970.1| forkhead box B1 [Xenopus (Silurana) tropicalis]
 gi|166796519|gb|AAI59041.1| foxb1 protein [Xenopus (Silurana) tropicalis]
          Length = 322

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLS N  FIK+PR  ++PGKGSFW + P         +F RRR+R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKR 108



 Score = 55.1 bits (131), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 29/48 (60%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY  L   A+ S+ +K L LS IY FI   +PYYR   + WQ
Sbjct: 11  DQKPPYSYISLTAMAIQSSQEKMLPLSEIYKFIMDRFPYYRENTQRWQ 58


>gi|402865590|ref|XP_003896998.1| PREDICTED: forkhead box protein C1 [Papio anubis]
          Length = 485

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.5 bits (140), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 167


>gi|358332462|dbj|GAA38059.2| fork head domain-containing protein FD3 [Clonorchis sinensis]
          Length = 518

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 34/50 (68%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+K+PR    PGKG++W +DP S       +F RRR+R
Sbjct: 189 NSIRHNLSLNDCFVKIPREPGNPGKGNYWMLDPNSVDMFDNGSFLRRRKR 238



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 27/46 (58%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  +  ++LTL GI  FI   +PYYR     WQ
Sbjct: 143 KPPYSYIALITMAILHSPHRRLTLGGICDFIMSRFPYYRERFPAWQ 188


>gi|196007274|ref|XP_002113503.1| hypothetical protein TRIADDRAFT_57744 [Trichoplax adhaerens]
 gi|190583907|gb|EDV23977.1| hypothetical protein TRIADDRAFT_57744 [Trichoplax adhaerens]
          Length = 174

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 33/48 (68%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSYA LI+ A+ S+  K +TLS IY +I  N+ YYR A  GW+
Sbjct: 63  DGKPPYSYANLIMLAINSSQSKMMTLSEIYQWICDNFSYYRDAGNGWK 110



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 35/49 (71%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQ 151
           NSIRHNLSLN+ F KVPRS+E+PGKGS+W ID   +     +   R+R+
Sbjct: 111 NSIRHNLSLNKCFRKVPRSKEDPGKGSYWTIDADPQDDAGSRLKSRKRK 159


>gi|563166|gb|AAA92040.1| FREAC-5, partial [Homo sapiens]
          Length = 106

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN  F+K+PR    PGKG++W +DP S+      +F RRR+R
Sbjct: 52  NSIRHNLSLNDCFVKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKR 101



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 32/51 (62%)

Query: 285 SQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           ++  +KPP SY  LI  A+  +  K+LTLSGI +FI+  +PYYR     WQ
Sbjct: 1   ARQPAKPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQ 51


>gi|387915504|gb|AFK11361.1| hepatocyte nuclear factor 3-beta [Callorhinchus milii]
          Length = 430

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRH+LS N  F+KVPRS ++PGKGSFW + P S   + E     RRQ+   C +    
Sbjct: 200 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSG-NMFENGCYLRRQKRFKCEKKQAL 258

Query: 163 LSSRCTLR 170
            S++ T R
Sbjct: 259 KSAQETTR 266



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 29/47 (61%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  +  K LTLS IY +I   +P+YR   + WQ
Sbjct: 153 AKPPYSYISLITMAIQQSPSKMLTLSEIYQWIMDLFPFYRQNQQRWQ 199


>gi|348505864|ref|XP_003440480.1| PREDICTED: forkhead box protein B1-like [Oreochromis niloticus]
          Length = 313

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLS N  FIK+PR  ++PGKGSFW + P         +F RRR+R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPNCGDMFENGSFLRRRKR 108



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 28/48 (58%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY  L   A+ S  +K L LS IY FI   +PYYR   + WQ
Sbjct: 11  DQKPPYSYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQ 58


>gi|440899106|gb|ELR50471.1| Forkhead box protein B1 [Bos grunniens mutus]
          Length = 325

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLS N  FIK+PR  ++PGKGSFW + P         +F RRR+R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKR 108



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 29/48 (60%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY  L   A+ S+ +K L LS IY FI   +PYYR   + WQ
Sbjct: 11  DQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQ 58


>gi|47229824|emb|CAG07020.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 609

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 12/139 (8%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA--P 160
           NSIRHNLSLN+ F+KVPRS+++PGKGS+W ID   +   +    ++R + G    RA  P
Sbjct: 44  NSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRPRSGE---RASTP 100

Query: 161 FGLSS-----RCTLRFPSTNIRLQFQSLVNESDPAPTGQSVSSSGVGVMGNPATSSLLPP 215
           + L S      C +   S +  L   ++ N+     T Q  S S    + N  +   L  
Sbjct: 101 YSLESESLGMECMISG-SASPTLAINTVTNKVALYNTDQEGSDSPRSSLNNSLSDQSLAS 159

Query: 216 LRINIPDHPHTEISSSPFP 234
           + +N   H +T ++S P P
Sbjct: 160 VNLNS-VHSYTPVTSHPEP 177


>gi|345329957|ref|XP_003431451.1| PREDICTED: hypothetical protein LOC100077216 [Ornithorhynchus
           anatinus]
          Length = 558

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 34/49 (69%)

Query: 287 DDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D  KPPYSY  LI  A+ +A +K++TL+GIY FI   +P+YR   +GWQ
Sbjct: 110 DLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQ 158



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 159 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 202


>gi|431909874|gb|ELK12976.1| Forkhead box protein E1 [Pteropus alecto]
          Length = 232

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 33/47 (70%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
            KPPYSY  LI  A+A A +++LTL GIY FIT+ +P+YR   K WQ
Sbjct: 51  GKPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQ 97



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 28/36 (77%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSE 138
           NSIRHNL+LN  F+K+PR    PGKG++W +DP +E
Sbjct: 98  NSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAE 133


>gi|336469413|gb|EGO57575.1| hypothetical protein NEUTE1DRAFT_81248 [Neurospora tetrasperma FGSC
           2508]
 gi|350290947|gb|EGZ72161.1| hypothetical protein NEUTE2DRAFT_111532 [Neurospora tetrasperma
           FGSC 2509]
          Length = 770

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/47 (51%), Positives = 37/47 (78%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRR 149
           NSIRHNLSLN++FIK  R +++PGKG++W I+PG+E   +++   R+
Sbjct: 254 NSIRHNLSLNKHFIKQERPKDDPGKGNYWAIEPGAEQFFMKEKPSRK 300



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 34/52 (65%)

Query: 284 ISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           I  D +KP +SYA LI  A+  +  ++LTLS IY +I + + +Y+ +D GWQ
Sbjct: 202 IIDDGTKPHHSYATLIGMAILRSPQRRLTLSQIYKWIAETFSFYQLSDSGWQ 253


>gi|326468883|gb|EGD92892.1| forkhead transcription factor [Trichophyton tonsurans CBS 112818]
          Length = 817

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query: 279 HMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           H    +  D SKPPYSYA LI  A+  A +++LTLS IY +I+ N+ +YR  D GWQ
Sbjct: 273 HEMPPVEDDGSKPPYSYAILIGMAILRATNRRLTLSQIYKWISDNFAFYRAGDFGWQ 329



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 17/131 (12%)

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI-EQAFRR----- 148
           + G F   NSIRHNLSL++ FIK  R +++PGKG +W I+PG E + + ++ FR+     
Sbjct: 322 RAGDFGWQNSIRHNLSLHKAFIKQERPKDDPGKGHYWIIEPGMEGQFLKDKPFRKAPIMS 381

Query: 149 ----RRQRGVPCFRAPFGLSSRCTLRFPSTNIRLQ----FQSLVNESD---PAPTGQSVS 197
                + +      AP     +  L  PS+N  L       S + ES    PA   Q +S
Sbjct: 382 TIPASQPQSTAAAAAPLNTPKQPDLPPPSSNAGLSTINYLPSTIAESQDVAPASNLQDLS 441

Query: 198 SSGVGVMGNPA 208
           S       +PA
Sbjct: 442 SDATLPASDPA 452


>gi|358254924|dbj|GAA56585.1| forkhead box protein L1 [Clonorchis sinensis]
          Length = 531

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 34/47 (72%)

Query: 289 SKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +KPPYSY  LI  A+  A  +++TL+GIY FI +N+PYYR   +GWQ
Sbjct: 207 TKPPYSYIALIAMAIKYAPGRKITLNGIYRFIMENFPYYRDNRQGWQ 253



 Score = 51.2 bits (121), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 32/57 (56%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRA 159
           NSIRHNLSLN  F+K+PR +  PGKG++W +   ++       +R+    G    R 
Sbjct: 254 NSIRHNLSLNDCFVKLPRDKSRPGKGNYWTLSTNADEMFEHGNYRKTGCLGYSLIRV 310


>gi|61867578|ref|XP_585450.1| PREDICTED: forkhead box protein B1 [Bos taurus]
 gi|296213368|ref|XP_002753240.1| PREDICTED: forkhead box protein B1 [Callithrix jacchus]
 gi|297479637|ref|XP_002690896.1| PREDICTED: forkhead box protein B1 [Bos taurus]
 gi|296483253|tpg|DAA25368.1| TPA: forkhead box B1-like [Bos taurus]
          Length = 325

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLS N  FIK+PR  ++PGKGSFW + P         +F RRR+R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKR 108



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 29/48 (60%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY  L   A+ S+ +K L LS IY FI   +PYYR   + WQ
Sbjct: 11  DQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQ 58


>gi|159031988|ref|NP_071773.2| forkhead box protein B1 [Mus musculus]
 gi|21542341|sp|Q64732.2|FOXB1_MOUSE RecName: Full=Forkhead box protein B1; AltName: Full=Transcription
           factor FKH-5
 gi|2098744|gb|AAB57686.1| winged-helix protein [Mus musculus]
 gi|84993289|gb|AAI11909.1| Forkhead box B1 [Mus musculus]
 gi|148694227|gb|EDL26174.1| forkhead box B1 [Mus musculus]
          Length = 325

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLS N  FIK+PR  ++PGKGSFW + P         +F RRR+R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKR 108



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 29/48 (60%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY  L   A+ S+ +K L LS IY FI   +PYYR   + WQ
Sbjct: 11  DQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQ 58


>gi|397515447|ref|XP_003827963.1| PREDICTED: forkhead box protein B1 [Pan paniscus]
          Length = 325

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLS N  FIK+PR  ++PGKGSFW + P         +F RRR+R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKR 108



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 29/48 (60%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY  L   A+ S+ +K L LS IY FI   +PYYR   + WQ
Sbjct: 11  DQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQ 58


>gi|327301407|ref|XP_003235396.1| forkhead transcription factor [Trichophyton rubrum CBS 118892]
 gi|326462748|gb|EGD88201.1| forkhead transcription factor [Trichophyton rubrum CBS 118892]
          Length = 802

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query: 279 HMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           H    +  D SKPPYSYA LI  A+  A +++LTLS IY +I+ N+ +YR  D GWQ
Sbjct: 263 HEMPPVEDDGSKPPYSYAILIGMAILRATNRRLTLSQIYKWISDNFAFYRAGDFGWQ 319



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI-EQAFRR 148
           + G F   NSIRHNLSL++ FIK  R +++PGKG +W I+PG E + + ++ FR+
Sbjct: 312 RAGDFGWQNSIRHNLSLHKAFIKQERPKDDPGKGHYWIIEPGMEGQFLKDKPFRK 366


>gi|302652470|ref|XP_003018085.1| forkhead transcription factor (Sep1), putative [Trichophyton
           verrucosum HKI 0517]
 gi|291181690|gb|EFE37440.1| forkhead transcription factor (Sep1), putative [Trichophyton
           verrucosum HKI 0517]
          Length = 818

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 37/57 (64%)

Query: 279 HMSLSISQDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           H    +  D SKPPYSYA LI  A+  A +++LTLS IY +I+ N+ +YR  D GWQ
Sbjct: 277 HEMPPVEDDGSKPPYSYAILIGMAILRATNRRLTLSQIYKWISDNFAFYRAGDFGWQ 333



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 95  KNGVFVDGNSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLI-EQAFRR 148
           + G F   NSIRHNLSL++ FIK  R +++PGKG +W I+PG E + + ++ FR+
Sbjct: 326 RAGDFGWQNSIRHNLSLHKAFIKQERPKDDPGKGHYWIIEPGMEGQFLKDKPFRK 380


>gi|301775813|ref|XP_002923327.1| PREDICTED: forkhead box protein B1-like [Ailuropoda melanoleuca]
 gi|345795016|ref|XP_003433969.1| PREDICTED: forkhead box protein B1 [Canis lupus familiaris]
 gi|410961132|ref|XP_003987139.1| PREDICTED: forkhead box protein B1 [Felis catus]
 gi|281342319|gb|EFB17903.1| hypothetical protein PANDA_012450 [Ailuropoda melanoleuca]
          Length = 325

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLS N  FIK+PR  ++PGKGSFW + P         +F RRR+R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKR 108



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 29/48 (60%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY  L   A+ S+ +K L LS IY FI   +PYYR   + WQ
Sbjct: 11  DQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQ 58


>gi|105554437|ref|NP_036314.2| forkhead box protein B1 [Homo sapiens]
 gi|109081359|ref|XP_001100781.1| PREDICTED: forkhead box protein B1-like [Macaca mulatta]
 gi|114657381|ref|XP_529689.2| PREDICTED: forkhead box protein B1 [Pan troglodytes]
 gi|332235822|ref|XP_003267104.1| PREDICTED: forkhead box protein B1 [Nomascus leucogenys]
 gi|338717884|ref|XP_003363716.1| PREDICTED: forkhead box protein B1-like [Equus caballus]
 gi|354465258|ref|XP_003495097.1| PREDICTED: forkhead box protein B1-like [Cricetulus griseus]
 gi|402874456|ref|XP_003901053.1| PREDICTED: forkhead box protein B1 [Papio anubis]
 gi|215274160|sp|Q99853.3|FOXB1_HUMAN RecName: Full=Forkhead box protein B1; AltName: Full=Transcription
           factor FKH-5
 gi|109730609|gb|AAI13711.1| Forkhead box B1 [Homo sapiens]
 gi|119597987|gb|EAW77581.1| forkhead box B1 [Homo sapiens]
 gi|149028868|gb|EDL84209.1| rCG56656 [Rattus norvegicus]
 gi|158255324|dbj|BAF83633.1| unnamed protein product [Homo sapiens]
 gi|261861906|dbj|BAI47475.1| forkhead box B1 [synthetic construct]
 gi|344243806|gb|EGV99909.1| Forkhead box protein B1 [Cricetulus griseus]
 gi|431895949|gb|ELK05367.1| Forkhead box protein B1 [Pteropus alecto]
          Length = 325

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLS N  FIK+PR  ++PGKGSFW + P         +F RRR+R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKR 108



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 29/48 (60%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY  L   A+ S+ +K L LS IY FI   +PYYR   + WQ
Sbjct: 11  DQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQ 58


>gi|410962120|ref|XP_003987623.1| PREDICTED: forkhead box protein G1 [Felis catus]
          Length = 506

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 36/50 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NSIRHNLSLN+ F+KVPR  ++PGKG++W +DP S+   I     + R+R
Sbjct: 244 NSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 293



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 18/28 (64%), Positives = 23/28 (82%)

Query: 308 DKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +K+LTL+GIY FI KN+PYYR   +GWQ
Sbjct: 216 EKRLTLNGIYEFIMKNFPYYRENKQGWQ 243


>gi|395822264|ref|XP_003784441.1| PREDICTED: forkhead box protein B1-like [Otolemur garnettii]
          Length = 325

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 33/50 (66%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQR 152
           NS+RHNLS N  FIK+PR  ++PGKGSFW + P         +F RRR+R
Sbjct: 59  NSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKR 108



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 29/48 (60%)

Query: 288 DSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           D KPPYSY  L   A+ S+ +K L LS IY FI   +PYYR   + WQ
Sbjct: 11  DQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQ 58


>gi|1199830|emb|CAA63243.1| fkh-6 [Mus musculus]
          Length = 337

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 39/65 (60%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFRRRRQRGVPCFRAPFG 162
           NSIRHNLSLN  F+KVPR +  PGKGS+W +DP          +RRR+++  P   +P  
Sbjct: 95  NSIRHNLSLNECFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPAAGSPEA 154

Query: 163 LSSRC 167
             +R 
Sbjct: 155 KRTRV 159



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 31/46 (67%)

Query: 290 KPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           KPPYSY  LI  A+  A ++++TL+GIY FI   +P+Y    +GWQ
Sbjct: 49  KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQ 94


>gi|405949949|gb|EKC17959.1| Forkhead box protein C2 [Crassostrea gigas]
          Length = 500

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 34/50 (68%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ S  DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 81  KDMVKPPYSYIALIAMAIQSQPDKKVTLNGIYQFIMDRFPFYRENKQGWQ 130



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/35 (65%), Positives = 29/35 (82%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGS 137
           NSIRHNLSLN  F+K+PR  ++PGKGS+W +DP S
Sbjct: 131 NSIRHNLSLNECFVKIPRDDKKPGKGSYWSLDPDS 165


>gi|332246159|ref|XP_003272217.1| PREDICTED: LOW QUALITY PROTEIN: forkhead box protein C1 [Nomascus
           leucogenys]
          Length = 444

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%)

Query: 286 QDDSKPPYSYAQLIVQAVASAHDKQLTLSGIYSFITKNYPYYRTADKGWQ 335
           +D  KPPYSY  LI  A+ +A DK++TL+GIY FI   +P+YR   +GWQ
Sbjct: 74  KDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQ 123



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 32/44 (72%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAF 146
           NSIRHNLSLN  F+KVPR  ++PGKGS+W +DP S +     +F
Sbjct: 124 NSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSF 167


>gi|302903338|ref|XP_003048834.1| hypothetical protein NECHADRAFT_105094 [Nectria haematococca mpVI
           77-13-4]
 gi|256729768|gb|EEU43121.1| hypothetical protein NECHADRAFT_105094 [Nectria haematococca mpVI
           77-13-4]
          Length = 617

 Score = 60.8 bits (146), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 4/80 (5%)

Query: 260 SADLHMAAHYAAAHTNVVNHMSLSISQDDS---KPPYSYAQLIVQAVASAHDKQLTLSGI 316
           SA  H  +  A+    ++    + +SQD++   KP YSYAQ+I QA+ +A D +L L+GI
Sbjct: 249 SAQSHSKSPAASTPAVMIGANGVDLSQDENQHIKPQYSYAQMITQAILNAPDGKLNLNGI 308

Query: 317 YSFITKNYPYYRTAD-KGWQ 335
           Y++IT  Y YYR     GWQ
Sbjct: 309 YTYITNTYAYYRHQQAAGWQ 328



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 32/45 (71%)

Query: 103 NSIRHNLSLNRYFIKVPRSQEEPGKGSFWRIDPGSEHKLIEQAFR 147
           NSIRHNLSLN+ F KV RS +EPGKG  W+I P    +++  A+R
Sbjct: 329 NSIRHNLSLNKAFDKVARSTDEPGKGMKWQIVPEVREEMVRNAYR 373


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.131    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,601,823,220
Number of Sequences: 23463169
Number of extensions: 234932380
Number of successful extensions: 640606
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4505
Number of HSP's successfully gapped in prelim test: 457
Number of HSP's that attempted gapping in prelim test: 629145
Number of HSP's gapped (non-prelim): 10395
length of query: 349
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 206
effective length of database: 9,003,962,200
effective search space: 1854816213200
effective search space used: 1854816213200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)