RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7735
         (120 letters)



>d1qzua_ c.34.1.1 (A:) 4'-phosphopantothenoylcysteine decarboxylase
           (PPC decarboxylase, halotolerance protein Hal3a) {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 181

 Score = 90.5 bits (224), Expect = 8e-25
 Identities = 53/75 (70%), Positives = 63/75 (84%)

Query: 1   MGLCDNLLTCILRAWDFSKPILFCPAMNTKMWNHPITKSHINTLKSWGYEEIPCVSKTLM 60
            G+CDNLLTC++RAWD SKP+LFCPAMNT MW HPIT   ++ LK++GY EIPCV+K L+
Sbjct: 100 SGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLV 159

Query: 61  CGDTGLGAMAEVDTI 75
           CGD GLGAMAEV TI
Sbjct: 160 CGDEGLGAMAEVGTI 174


>d1mvla_ c.34.1.1 (A:) 4'-phosphopantothenoylcysteine decarboxylase
           (PPC decarboxylase, halotolerance protein Hal3a)
           {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 182

 Score = 76.7 bits (188), Expect = 2e-19
 Identities = 42/75 (56%), Positives = 51/75 (68%)

Query: 1   MGLCDNLLTCILRAWDFSKPILFCPAMNTKMWNHPITKSHINTLKSWGYEEIPCVSKTLM 60
            GLCDNLLTCI+RAWD++KP+   PAMNT MWN+P T+ H+ +L   G   IP + K L 
Sbjct: 97  GGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLA 156

Query: 61  CGDTGLGAMAEVDTI 75
            GD G GAMAE   I
Sbjct: 157 SGDYGNGAMAEPSLI 171


>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId:
           69002]}
          Length = 183

 Score = 56.7 bits (136), Expect = 1e-11
 Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 1   MGLCDNLLTCILRAWDFSKPILFCPAMNTKMWNHPITKSHINTLKSWGYEEIPCV---SK 57
            G+  NL+   + A       +F P MN  MWN  +   +I  L+  G+  I  V   + 
Sbjct: 98  NGVAMNLVATTVLAHP--HNTIFFPNMNDLMWNKTVVSRNIEQLRKDGHIVIEPVEIMAF 155

Query: 58  TLMCGDTGLG-AMAEVDTI 75
            +  G       +   D  
Sbjct: 156 EIATGTRKPNRGLITPDKA 174


>d1g5qa_ c.34.1.1 (A:) Epidermin modifying enzyme (peptidyl-cysteine
           decarboxylase) EpiD {Staphylococcus epidermidis [TaxId:
           1282]}
          Length = 174

 Score = 47.0 bits (111), Expect = 3e-08
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 8/72 (11%)

Query: 10  CILRAWDFSKPILFCPAMNTKMWNHPITKSHINTLKSWGYEEIPCVSKTLMCGDTGLG-- 67
                    + +   P MN +MW +P  + +I+ LK+   +            +   G  
Sbjct: 99  LTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNNDVKVYSPDMN--KSFEISSGRY 156

Query: 68  ----AMAEVDTI 75
                M  ++ +
Sbjct: 157 KNNITMPNIENV 168


>d1sbza_ c.34.1.1 (A:) Probable aromatic acid decarboxylase Pad1
           {Escherichia coli O157:H7 [TaxId: 83334]}
          Length = 186

 Score = 44.2 bits (104), Expect = 4e-07
 Identities = 10/55 (18%), Positives = 17/55 (30%), Gaps = 2/55 (3%)

Query: 2   GLCDNLLTCILRAWDFSKPILFCPAMNTKMWNHPITKSHINTLKSWGYEEIPCVS 56
           G  D L+     A    K       +  +M    I   ++  L   G   +P + 
Sbjct: 97  GYADGLVGRA--ADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMP 149


>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium
          cellulolyticum [TaxId: 1521]}
          Length = 380

 Score = 23.7 bits (50), Expect = 8.3
 Identities = 5/17 (29%), Positives = 8/17 (47%)

Query: 33 NHPITKSHINTLKSWGY 49
              TK  I+ +K  G+
Sbjct: 59 GIKTTKQMIDAIKQKGF 75


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.138    0.450 

Gapped
Lambda     K      H
   0.267   0.0455    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 468,055
Number of extensions: 18899
Number of successful extensions: 51
Number of sequences better than 10.0: 1
Number of HSP's gapped: 50
Number of HSP's successfully gapped: 10
Length of query: 120
Length of database: 2,407,596
Length adjustment: 74
Effective length of query: 46
Effective length of database: 1,391,576
Effective search space: 64012496
Effective search space used: 64012496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.6 bits)