BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7738
(307 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q66JG8|ALKB5_XENTR RNA demethylase ALKBH5 OS=Xenopus tropicalis GN=alkbh5 PE=2 SV=1
Length = 358
Score = 311 bits (798), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 171/212 (80%)
Query: 47 QKILQGVNQMSLFSHEECLALERNIDEVSSLAEQGQYKPCTVDRAPLRNKYFFGEGYTYG 106
+K+ G+ Q+ LFS +EC +E IDEV S AE+G Y+ TVDRAPLRNKYFFGEGYTYG
Sbjct: 49 RKVRSGIRQVRLFSPDECARIEAKIDEVVSRAEKGLYREHTVDRAPLRNKYFFGEGYTYG 108
Query: 107 SQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGGCIV 166
+QL R+G G ERLYP+GEVD IPAW+ LVI +L + V+P ++NSAVINDYQPGGCIV
Sbjct: 109 AQLQRRGPGQERLYPKGEVDEIPAWVNELVIRRLVEHRVIPEGFVNSAVINDYQPGGCIV 168
Query: 167 SHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAAN 226
SH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPV +LPVQRG VT+L +AA+
Sbjct: 169 SHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVFFLPVQRGSVTVLSGYAAD 228
Query: 227 GITHCVRPQDTQHRRAVILLRRVLPHAPRLTL 258
ITHC+RPQD + RRAV++LR+ APRL +
Sbjct: 229 EITHCIRPQDIKERRAVVILRKTRTEAPRLEM 260
>sp|Q6GPB5|ALKB5_XENLA RNA demethylase ALKBH5 OS=Xenopus laevis GN=alkbh5 PE=2 SV=1
Length = 360
Score = 311 bits (798), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 171/212 (80%)
Query: 47 QKILQGVNQMSLFSHEECLALERNIDEVSSLAEQGQYKPCTVDRAPLRNKYFFGEGYTYG 106
+K+ G+ QM LFS +EC A+E IDEV S A++G Y+ TVDRAPLRNKYFFGEGYTYG
Sbjct: 51 RKVRSGIRQMRLFSPDECAAIESKIDEVVSRADKGLYQEHTVDRAPLRNKYFFGEGYTYG 110
Query: 107 SQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGGCIV 166
+QL R+G G ERLYP+GEVD IP W+ LVI +L + ++P ++NSAVINDYQPGGCIV
Sbjct: 111 AQLQRRGPGQERLYPKGEVDEIPGWVHELVIRRLVERRIIPEGFVNSAVINDYQPGGCIV 170
Query: 167 SHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAAN 226
SH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPV +LPV+RG VT+L +AA+
Sbjct: 171 SHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVFFLPVRRGSVTVLSGYAAD 230
Query: 227 GITHCVRPQDTQHRRAVILLRRVLPHAPRLTL 258
ITHC+RPQD + RRAV++LR+ APRL +
Sbjct: 231 EITHCIRPQDIKERRAVVILRKTRTEAPRLEM 262
>sp|Q6P6C2|ALKB5_HUMAN RNA demethylase ALKBH5 OS=Homo sapiens GN=ALKBH5 PE=1 SV=2
Length = 394
Score = 306 bits (784), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 140/210 (66%), Positives = 167/210 (79%)
Query: 47 QKILQGVNQMSLFSHEECLALERNIDEVSSLAEQGQYKPCTVDRAPLRNKYFFGEGYTYG 106
+K+ G+ QM LFS +EC +E IDEV S AE+G Y TVDRAPLRNKYFFGEGYTYG
Sbjct: 83 RKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYG 142
Query: 107 SQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGGCIV 166
+QL ++G G ERLYP G+VD IP W+ LVI KL + V+P ++NSAVINDYQPGGCIV
Sbjct: 143 AQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIV 202
Query: 167 SHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAAN 226
SH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPVL LPV+RG VT+L +AA+
Sbjct: 203 SHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAAD 262
Query: 227 GITHCVRPQDTQHRRAVILLRRVLPHAPRL 256
ITHC+RPQD + RRAVI+LR+ APRL
Sbjct: 263 EITHCIRPQDIKERRAVIILRKTRLDAPRL 292
>sp|Q3TSG4|ALKB5_MOUSE RNA demethylase ALKBH5 OS=Mus musculus GN=Alkbh5 PE=1 SV=2
Length = 395
Score = 306 bits (783), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 143/236 (60%), Positives = 175/236 (74%)
Query: 21 KNRYSRNQRSSPYDIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAEQ 80
K +Y + D + + E +K+ G+ Q+ LFS +EC +E IDEV S AE+
Sbjct: 58 KRKYQEDSDPERSDYEEHQLQKEEEARKVKSGIRQIRLFSQDECSKIEARIDEVVSRAEK 117
Query: 81 GQYKPCTVDRAPLRNKYFFGEGYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKL 140
G Y TVDRAPLRNKYFFGEGYTYG+QL ++G G ERLYP G+VD IP W+ LVI KL
Sbjct: 118 GLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPDWVHQLVIQKL 177
Query: 141 EQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKP 200
+ V+P ++NSAVINDYQPGGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKP
Sbjct: 178 VEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKP 237
Query: 201 IRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAPRL 256
IRVSEPVL LPV+RG VT+L +AA+ ITHC+RPQD + RRAVI+LR+ APRL
Sbjct: 238 IRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRL 293
>sp|D3ZKD3|ALKB5_RAT RNA demethylase ALKBH5 OS=Rattus norvegicus GN=Alkbh5 PE=3 SV=1
Length = 395
Score = 305 bits (782), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 143/236 (60%), Positives = 175/236 (74%)
Query: 21 KNRYSRNQRSSPYDIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAEQ 80
K +Y + D + + E +K+ G+ Q+ LFS +EC +E IDEV S AE+
Sbjct: 58 KRKYQEDSDPERSDYEEHQLQKEEEARKVKSGIRQIRLFSQDECSKIEARIDEVVSRAEK 117
Query: 81 GQYKPCTVDRAPLRNKYFFGEGYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKL 140
G Y TVDRAPLRNKYFFGEGYTYG+QL ++G G ERLYP G+VD IP W+ LVI KL
Sbjct: 118 GLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKL 177
Query: 141 EQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKP 200
+ V+P ++NSAVINDYQPGGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKP
Sbjct: 178 VEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKP 237
Query: 201 IRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAPRL 256
IRVSEPVL LPV+RG VT+L +AA+ ITHC+RPQD + RRAVI+LR+ APRL
Sbjct: 238 IRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRL 293
>sp|E1BH29|ALKB5_BOVIN RNA demethylase ALKBH5 OS=Bos taurus GN=ALKBH5 PE=3 SV=1
Length = 394
Score = 305 bits (782), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 140/210 (66%), Positives = 167/210 (79%)
Query: 47 QKILQGVNQMSLFSHEECLALERNIDEVSSLAEQGQYKPCTVDRAPLRNKYFFGEGYTYG 106
+K+ G+ QM LFS +EC +E IDEV S AE+G Y TVDRAPLRNKYFFGEGYTYG
Sbjct: 83 RKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYFFGEGYTYG 142
Query: 107 SQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGGCIV 166
+QL ++G G ERLYP G+VD IP W+ LVI KL + V+P ++NSAVINDYQPGGCIV
Sbjct: 143 AQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKLVEHRVIPEGFVNSAVINDYQPGGCIV 202
Query: 167 SHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAAN 226
SH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPVL LPV+RG VT+L +AA+
Sbjct: 203 SHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAAD 262
Query: 227 GITHCVRPQDTQHRRAVILLRRVLPHAPRL 256
ITHC+RPQD + RRAVI+LR+ APRL
Sbjct: 263 EITHCIRPQDIKERRAVIILRKTRLDAPRL 292
>sp|Q08BA6|ALKB5_DANRE RNA demethylase ALKBH5 OS=Danio rerio GN=alkbh5 PE=2 SV=1
Length = 352
Score = 304 bits (779), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 141/242 (58%), Positives = 179/242 (73%)
Query: 15 EQNLKLKNRYSRNQRSSPYDIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEV 74
++ + N R R S D + + +++ G+ Q S+F+ EEC +E IDEV
Sbjct: 19 DKVFEYSNGEKRKYRESDDDESEYEERRDAEARRVKSGIKQASIFTLEECARIEAKIDEV 78
Query: 75 SSLAEQGQYKPCTVDRAPLRNKYFFGEGYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQS 134
+ A++G Y+ TVDRAPLRNKYFFGEGYTYG+QL ++G G ERLY +GEVD IP W+
Sbjct: 79 VAKADKGLYREHTVDRAPLRNKYFFGEGYTYGAQLEKRGPGQERLYSKGEVDDIPDWVHE 138
Query: 135 LVITKLEQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGC 194
LVI +L GV+P ++NSAVINDYQPGGCIVSH+DP HIF+RPI+S+S FSDSALCFGC
Sbjct: 139 LVIDRLVTHGVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGC 198
Query: 195 KFNFKPIRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAP 254
KF FKPIRVSEPVL+LPV+RG VT+L +AA+ ITHC+RPQD + RRAVI+LR+ AP
Sbjct: 199 KFLFKPIRVSEPVLHLPVRRGSVTVLSGYAADDITHCIRPQDIKERRAVIILRKTRADAP 258
Query: 255 RL 256
RL
Sbjct: 259 RL 260
>sp|Q2J867|ARLY_FRASC Argininosuccinate lyase OS=Frankia sp. (strain CcI3) GN=argH PE=3
SV=1
Length = 464
Score = 38.5 bits (88), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 27 NQRSSPYDIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAEQGQYKPC 86
+ R +PYD+ SK HAR L ++ L +E A+ +DE+S QG+++P
Sbjct: 26 DWRLAPYDLLASKSHARVL--------HRAGLLDADELAAMLAALDELSDAVAQGRFRPT 77
Query: 87 TVD 89
D
Sbjct: 78 VED 80
>sp|Q80Y20|ALKB8_MOUSE Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus
GN=Alkbh8 PE=2 SV=1
Length = 664
Score = 38.5 bits (88), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 112 KGLGNERLYPEGEVD---PIPAWIQSLVITKLEQMGVVPPNYI----NSAVINDYQPGGC 164
K G E Y VD P+P + + + LE++ + YI + IN Y+PG
Sbjct: 177 KHFGYEFHYESNTVDKDKPLPGGLPEVCSSILEKL--LKEGYIKHKPDQLTINQYEPGHG 234
Query: 165 IVSHIDPPHIFDRPIISLSLFSDSALCF 192
I +HID F+ IISLSL S + F
Sbjct: 235 IPAHIDTHSAFEDEIISLSLGSAIVMDF 262
>sp|Q95K79|ALKB8_MACFA Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis
GN=ALKBH8 PE=2 SV=1
Length = 664
Score = 38.1 bits (87), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 112 KGLGNERLYPEGEVD---PIPAWIQSLVITKLEQMGVVPPNYI----NSAVINDYQPGGC 164
K G E Y VD P+P + + + LE+ + YI + IN Y+PG
Sbjct: 177 KHFGYEFHYENNNVDKDKPLPGGLPDICDSFLEKW--LREGYIKHKPDQMTINQYEPGQG 234
Query: 165 IVSHIDPPHIFDRPIISLSLFSDSALCF 192
I +HID F+ I+SLSL S+ + F
Sbjct: 235 IPAHIDTHSAFEDEIVSLSLGSEIVMDF 262
>sp|Q6IQE9|ALKB6_DANRE Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio
rerio GN=alkbh6 PE=2 SV=1
Length = 234
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
Query: 121 PEGEV-DPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPI 179
P+G + + +P W+ K+ +G N ++N+Y+PG I+ H D P ++ +
Sbjct: 67 PKGMLAEKLPDWLLEYT-EKISALGAFAGKTANHVLVNEYKPGEGIMPHEDGP-LYHPTV 124
Query: 180 ISLSLFSDSALCFGCKFNFKPIRVSEP----------VLYLPVQRGCVTLLRDFAANGIT 229
++++ S + L F ++P+ +EP +L L VQR + +L+D
Sbjct: 125 TTITVGSHTLLDF-----YRPVCQAEPDAPQTEESRYMLSLLVQRKSLLILQDDMYKCYL 179
Query: 230 HCVR 233
H +R
Sbjct: 180 HGIR 183
>sp|A1A4L5|ALKB8_BOVIN Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus GN=ALKBH8
PE=2 SV=1
Length = 664
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 112 KGLGNERLYPEGEVD---PIPAWIQSLVITKLEQMGVVPPNYI----NSAVINDYQPGGC 164
K G E Y VD P+P + + + LE+ + +I + IN Y+PG
Sbjct: 177 KHFGYEFHYENNNVDKDKPLPGGLPDICESILEKW--LKEGFIKHKPDQLTINQYEPGHG 234
Query: 165 IVSHIDPPHIFDRPIISLSLFSDSALCF 192
I +HID F+ IISLSL S+ + F
Sbjct: 235 IPAHIDTHSAFEDEIISLSLGSEIVMDF 262
>sp|Q96BT7|ALKB8_HUMAN Alkylated DNA repair protein alkB homolog 8 OS=Homo sapiens
GN=ALKBH8 PE=1 SV=2
Length = 664
Score = 35.4 bits (80), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 152 NSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCF 192
+ IN Y+PG I +HID F+ I+SLSL S+ + F
Sbjct: 222 DQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDF 262
>sp|Q5PQ59|ALKB6_XENLA Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Xenopus
laevis GN=alkbh6 PE=2 SV=1
Length = 240
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 126 DPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLF 185
+ +P+W+Q ++ +GV + N ++N+Y G I+ H D P ++ + ++SL
Sbjct: 72 EKLPSWLQKYT-DQISSLGVFGDHSANHVLVNEYNAGEGIMPHEDGP-MYYPTVTTISLG 129
Query: 186 SDSALCFGCKFN 197
S + L F N
Sbjct: 130 SHTLLDFYVPIN 141
>sp|Q3KRA9|ALKB6_HUMAN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo
sapiens GN=ALKBH6 PE=1 SV=2
Length = 238
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 120 YPEGEV-DPIPAWIQSLV--ITKLEQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFD 176
+P G V + +P W+Q V ++ L G +P N++ ++N Y PG I+ H D P +
Sbjct: 66 HPRGMVPERLPPWLQRYVDKVSNLSLFGGLPANHV---LVNQYLPGEGIMPHEDGPLYYP 122
Query: 177 RPIISLSLFSDSALCF 192
+ ++SL S + L F
Sbjct: 123 T-VSTISLGSHTVLDF 137
>sp|Q8K2U2|ALKB6_MOUSE Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Mus
musculus GN=Alkbh6 PE=2 SV=2
Length = 235
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 120 YPEGEV-DPIPAWIQSLV--ITKLEQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFD 176
+P G V + +P W+Q V ++ L G +P N++ ++N Y PG I+ H D P +
Sbjct: 66 HPRGMVPERLPPWLQRYVDKVSDLSLFGGLPANHV---LVNQYLPGEGIMPHEDGPLYYP 122
Query: 177 RPIISLSLFSDSALCF 192
+ ++SL S + L F
Sbjct: 123 T-VSTISLGSHTVLDF 137
>sp|Q6NHG4|ARLY_CORDI Argininosuccinate lyase OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=argH PE=3
SV=1
Length = 477
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Query: 31 SPYDIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAEQGQYKPCTVD 89
+PYD+ SK HAR L N+ L S + + +D++ G++KP D
Sbjct: 38 APYDVLASKAHARVL--------NKAKLLSDSDLETMLGGLDKLGKAVASGEFKPLPTD 88
>sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis
GN=alkbh8 PE=2 SV=2
Length = 628
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 112 KGLGNERLYPEGEVD---PIPAWIQSL---VITKLEQMGVVPPNYINSAVINDYQPGGCI 165
K G E Y VD P+P + + K Q G++ + + IN Y+PG I
Sbjct: 175 KHYGYEFRYDNNNVDKDKPLPGGLPDFCTEALRKCVQRGLIKHD-PDQLTINQYEPGQGI 233
Query: 166 VSHIDPPHIFDRPIISLSLFSDSALCF 192
H+D F+ I+SLSL ++ + F
Sbjct: 234 PPHVDTHSAFEDEILSLSLGAEIVMDF 260
>sp|A8ESR5|Y724_ARCB4 PKHD-type hydroxylase Abu_0724 OS=Arcobacter butzleri (strain
RM4018) GN=Abu_0724 PE=3 SV=1
Length = 226
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 123 GEVDPIPAWIQSLVITKLEQ----MGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFD-- 176
E DP+ +++ ++ T L + P +I S N Y+ GG +H+D +FD
Sbjct: 47 AESDPLTNYLRDIIKTALNSNPLFISAALPKHIISPFFNKYENGGNYGNHVDNSILFDMN 106
Query: 177 -----RPIISLSLF 185
R IS SLF
Sbjct: 107 EKKAFRTDISCSLF 120
>sp|Q5UR03|YL905_MIMIV Uncharacterized protein L905 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L905 PE=4 SV=1
Length = 210
Score = 31.6 bits (70), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 152 NSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLP 211
+ ++N+Y+PG + H D + II LSL S + + F + KPI + + Y+P
Sbjct: 92 DQIIVNEYKPGEGLKPHFDRKDYYQNVIIGLSLGSGTIMEF---YKNKPIPEKKKI-YIP 147
Query: 212 VQRGCVTLLRDFAANGITHCVRPQ 235
+ + +++D A H + P+
Sbjct: 148 PR--SLYIIKDDARYIWKHGIPPR 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,010,761
Number of Sequences: 539616
Number of extensions: 5042753
Number of successful extensions: 34127
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 33930
Number of HSP's gapped (non-prelim): 180
length of query: 307
length of database: 191,569,459
effective HSP length: 117
effective length of query: 190
effective length of database: 128,434,387
effective search space: 24402533530
effective search space used: 24402533530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)