Your job contains 1 sequence.
>psy7738
MAAYLSELYKCQVVEQNLKLKNRYSRNQRSSPYDIGQSKHHARELRQKILQGVNQMSLFS
HEECLALERNIDEVSSLAEQGQYKPCTVDRAPLRNKYFFGEGYTYGSQLVRKGLGNERLY
PEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPII
SLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQHR
RAVILLRRVLPHAPRLTLSQTPRVKPYHSLYDVQARESGGYFRSSIETYNNNENHSNKNT
SNGLDKQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7738
(307 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NIA5 - symbol:ALKBH5 "Uncharacterized protein... 791 1.1e-78 1
UNIPROTKB|Q66JG8 - symbol:alkbh5 "RNA demethylase ALKBH5"... 774 7.1e-77 1
UNIPROTKB|E1BH29 - symbol:ALKBH5 "RNA demethylase ALKBH5"... 773 9.0e-77 1
UNIPROTKB|E2RPR0 - symbol:ALKBH5 "Uncharacterized protein... 772 1.1e-76 1
UNIPROTKB|Q6P6C2 - symbol:ALKBH5 "RNA demethylase ALKBH5"... 772 1.1e-76 1
UNIPROTKB|Q6GPB5 - symbol:alkbh5 "RNA demethylase ALKBH5"... 772 1.1e-76 1
RGD|1309496 - symbol:Alkbh5 "alkB, alkylation repair homo... 762 1.3e-75 1
MGI|MGI:2144489 - symbol:Alkbh5 "alkB, alkylation repair ... 761 1.7e-75 1
ZFIN|ZDB-GENE-061013-602 - symbol:alkbh5 "alkB, alkylatio... 755 7.3e-75 1
UNIPROTKB|I3LGP5 - symbol:ALKBH5 "Uncharacterized protein... 413 1.3e-38 1
TAIR|locus:2060964 - symbol:AT2G17970 species:3702 "Arabi... 153 3.4e-08 1
TAIR|locus:2028486 - symbol:AT1G48980 species:3702 "Arabi... 149 4.1e-08 1
TAIR|locus:2135124 - symbol:AT4G36090 species:3702 "Arabi... 149 1.0e-07 1
TAIR|locus:2066385 - symbol:AT2G48080 species:3702 "Arabi... 132 6.6e-06 1
>UNIPROTKB|F1NIA5 [details] [associations]
symbol:ALKBH5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR005123
GO:GO:0016706 Pfam:PF13532 GeneTree:ENSGT00390000009298 OMA:GAKRKYQ
EMBL:AADN02023711 IPI:IPI00580269 Ensembl:ENSGALT00000007980
Uniprot:F1NIA5
Length = 375
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 154/247 (62%), Positives = 183/247 (74%)
Query: 21 KNRYSRNQRSSPYDIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAEQ 80
K RY + S D + K E +K+ G+ Q+ LFS EEC +E ID+V S AE+
Sbjct: 38 KRRYHEDSGSEHSDYEEQKEE--EEARKVKSGIRQLRLFSAEECAKIEARIDDVVSRAEK 95
Query: 81 GQYKPCTVDRAPLRNKYFFGEGYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKL 140
G YK TVDRAPLRNKYFFGEGYTYGSQL R+G G ERLYP GEVD IP W+ LVI KL
Sbjct: 96 GLYKEHTVDRAPLRNKYFFGEGYTYGSQLQRRGPGQERLYPRGEVDAIPEWVHDLVIRKL 155
Query: 141 EQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKP 200
+ V+P ++NSAVINDYQPGGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKP
Sbjct: 156 VEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKP 215
Query: 201 IRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAPRL-TLS 259
IRVSEPVL+LPV+RG VT+L +AA+ ITHC+RPQD + RRAVI+LR+ APRL T S
Sbjct: 216 IRVSEPVLFLPVKRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRLETKS 275
Query: 260 QTPRVKP 266
+ V P
Sbjct: 276 LSSSVLP 282
>UNIPROTKB|Q66JG8 [details] [associations]
symbol:alkbh5 "RNA demethylase ALKBH5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006397 "mRNA
processing" evidence=ISS] [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=ISS] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=ISS] [GO:0035515 "oxidative RNA demethylase
activity" evidence=ISS] [GO:0035553 "oxidative single-stranded RNA
demethylation" evidence=ISS] InterPro:IPR005123 GO:GO:0046872
GO:GO:0016706 GO:GO:0016702 Pfam:PF13532 CTD:54890 KO:K10767
eggNOG:NOG264303 HOGENOM:HOG000007505 HOVERGEN:HBG080833
OrthoDB:EOG45B1FW EMBL:AAMC01050884 EMBL:AAMC01050885 EMBL:BC080920
RefSeq:NP_001008038.1 UniGene:Str.66664 ProteinModelPortal:Q66JG8
Ensembl:ENSXETT00000012702 Ensembl:ENSXETT00000060222 GeneID:493400
KEGG:xtr:493400 Xenbase:XB-GENE-987580 InParanoid:Q66JG8
OMA:RKFRESD Uniprot:Q66JG8
Length = 358
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 142/221 (64%), Positives = 174/221 (78%)
Query: 38 SKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAEQGQYKPCTVDRAPLRNKY 97
S+ E +K+ G+ Q+ LFS +EC +E IDEV S AE+G Y+ TVDRAPLRNKY
Sbjct: 40 SEPEEEEEARKVRSGIRQVRLFSPDECARIEAKIDEVVSRAEKGLYREHTVDRAPLRNKY 99
Query: 98 FFGEGYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINSAVIN 157
FFGEGYTYG+QL R+G G ERLYP+GEVD IPAW+ LVI +L + V+P ++NSAVIN
Sbjct: 100 FFGEGYTYGAQLQRRGPGQERLYPKGEVDEIPAWVNELVIRRLVEHRVIPEGFVNSAVIN 159
Query: 158 DYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCV 217
DYQPGGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPV +LPVQRG V
Sbjct: 160 DYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVFFLPVQRGSV 219
Query: 218 TLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAPRLTL 258
T+L +AA+ ITHC+RPQD + RRAV++LR+ APRL +
Sbjct: 220 TVLSGYAADEITHCIRPQDIKERRAVVILRKTRTEAPRLEM 260
>UNIPROTKB|E1BH29 [details] [associations]
symbol:ALKBH5 "RNA demethylase ALKBH5" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=ISS] [GO:0016607
"nuclear speck" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0035515 "oxidative RNA demethylase activity" evidence=ISS]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=ISS] [GO:0035553 "oxidative single-stranded RNA
demethylation" evidence=ISS] [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0006397 "mRNA processing" evidence=ISS]
[GO:0001666 "response to hypoxia" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] InterPro:IPR005123
GO:GO:0016706 Pfam:PF13532 EMBL:DAAA02048990 IPI:IPI00707099
RefSeq:NP_001192446.1 UniGene:Bt.6937 ProteinModelPortal:E1BH29
Ensembl:ENSBTAT00000034976 GeneID:533303 KEGG:bta:533303 CTD:54890
GeneTree:ENSGT00390000009298 KO:K10767 OMA:GAKRKYQ NextBio:20875992
Uniprot:E1BH29
Length = 394
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 148/248 (59%), Positives = 181/248 (72%)
Query: 20 LKNRYSRNQRSSPYDIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAE 79
+K +Y + D + + E +K+ G+ QM LFS +EC +E IDEV S AE
Sbjct: 56 VKRKYPEDSDPERSDFEEQQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAE 115
Query: 80 QGQYKPCTVDRAPLRNKYFFGEGYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITK 139
+G Y TVDRAPLRNKYFFGEGYTYG+QL ++G G ERLYP G+VD IP W+ LVI K
Sbjct: 116 KGLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQK 175
Query: 140 LEQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFK 199
L + V+P ++NSAVINDYQPGGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FK
Sbjct: 176 LVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFK 235
Query: 200 PIRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAPRL-TL 258
PIRVSEPVL LPV+RG VT+L +AA+ ITHC+RPQD + RRAVI+LR+ APRL T
Sbjct: 236 PIRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRLETK 295
Query: 259 SQTPRVKP 266
S + V P
Sbjct: 296 SLSSSVLP 303
>UNIPROTKB|E2RPR0 [details] [associations]
symbol:ALKBH5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR005123
GO:GO:0016706 Pfam:PF13532 GeneTree:ENSGT00390000009298 OMA:GAKRKYQ
EMBL:AAEX03003715 Ensembl:ENSCAFT00000029091 NextBio:20894983
Uniprot:E2RPR0
Length = 434
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 148/247 (59%), Positives = 180/247 (72%)
Query: 21 KNRYSRNQRSSPYDIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAEQ 80
K +Y + D + + E +K+ G+ QM LFS +EC +E IDEV S AE+
Sbjct: 57 KRKYQEDSDPERSDYEEQQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEK 116
Query: 81 GQYKPCTVDRAPLRNKYFFGEGYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKL 140
G Y TVDRAPLRNKYFFGEGYTYG+QL ++G G ERLYP G+VD IP W+ LVI KL
Sbjct: 117 GLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKL 176
Query: 141 EQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKP 200
+ V+P ++NSAVINDYQPGGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKP
Sbjct: 177 VEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKP 236
Query: 201 IRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAPRL-TLS 259
IRVSEPVL LPV+RG VT+L +AA+ ITHC+RPQD + RRAVI+LR+ APRL T S
Sbjct: 237 IRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRLETKS 296
Query: 260 QTPRVKP 266
+ V P
Sbjct: 297 LSSSVLP 303
>UNIPROTKB|Q6P6C2 [details] [associations]
symbol:ALKBH5 "RNA demethylase ALKBH5" species:9606 "Homo
sapiens" [GO:0016702 "oxidoreductase activity, acting on single
donors with incorporation of molecular oxygen, incorporation of two
atoms of oxygen" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0035515 "oxidative RNA demethylase activity" evidence=IDA]
[GO:0035553 "oxidative single-stranded RNA demethylation"
evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0006406
"mRNA export from nucleus" evidence=IMP] [GO:0006397 "mRNA
processing" evidence=IMP] [GO:0001666 "response to hypoxia"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IDA] [GO:0007283 "spermatogenesis" evidence=ISS]
InterPro:IPR005123 GO:GO:0046872 GO:GO:0016706 GO:GO:0016702
Pfam:PF13532 CTD:54890 KO:K10767 eggNOG:NOG264303
HOGENOM:HOG000007505 HOVERGEN:HBG080833 EMBL:AK000315 EMBL:AK301107
EMBL:AC087164 EMBL:AC109515 EMBL:CH471196 EMBL:BC062339
IPI:IPI00413659 IPI:IPI00759562 RefSeq:NP_060228.3
UniGene:Hs.740458 ProteinModelPortal:Q6P6C2 IntAct:Q6P6C2
STRING:Q6P6C2 PhosphoSite:Q6P6C2 DMDM:74749138 PaxDb:Q6P6C2
PRIDE:Q6P6C2 Ensembl:ENST00000399138 GeneID:54890 KEGG:hsa:54890
UCSC:uc010cpw.3 GeneCards:GC17P018086 HGNC:HGNC:25996 HPA:HPA007196
MIM:613303 neXtProt:NX_Q6P6C2 PharmGKB:PA142671230
InParanoid:Q6P6C2 GenomeRNAi:54890 NextBio:57883
ArrayExpress:Q6P6C2 Bgee:Q6P6C2 CleanEx:HS_ALKBH5
Genevestigator:Q6P6C2 GermOnline:ENSG00000091542 Uniprot:Q6P6C2
Length = 394
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 148/247 (59%), Positives = 180/247 (72%)
Query: 21 KNRYSRNQRSSPYDIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAEQ 80
K +Y + D + + E +K+ G+ QM LFS +EC +E IDEV S AE+
Sbjct: 57 KRKYQEDSDPERSDYEEQQLQKEEEARKVKSGIRQMRLFSQDECAKIEARIDEVVSRAEK 116
Query: 81 GQYKPCTVDRAPLRNKYFFGEGYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKL 140
G Y TVDRAPLRNKYFFGEGYTYG+QL ++G G ERLYP G+VD IP W+ LVI KL
Sbjct: 117 GLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKL 176
Query: 141 EQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKP 200
+ V+P ++NSAVINDYQPGGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKP
Sbjct: 177 VEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKP 236
Query: 201 IRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAPRL-TLS 259
IRVSEPVL LPV+RG VT+L +AA+ ITHC+RPQD + RRAVI+LR+ APRL T S
Sbjct: 237 IRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRLETKS 296
Query: 260 QTPRVKP 266
+ V P
Sbjct: 297 LSSSVLP 303
>UNIPROTKB|Q6GPB5 [details] [associations]
symbol:alkbh5 "RNA demethylase ALKBH5" species:8355
"Xenopus laevis" [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0016607 "nuclear
speck" evidence=ISS] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=ISS] [GO:0035515
"oxidative RNA demethylase activity" evidence=ISS] [GO:0035553
"oxidative single-stranded RNA demethylation" evidence=ISS]
InterPro:IPR005123 GO:GO:0046872 GO:GO:0016706 GO:GO:0016702
Pfam:PF13532 CTD:54890 KO:K10767 HOVERGEN:HBG080833 EMBL:BC073226
RefSeq:NP_001085704.1 UniGene:Xl.3522 ProteinModelPortal:Q6GPB5
GeneID:444130 KEGG:xla:444130 Xenbase:XB-GENE-987585 Uniprot:Q6GPB5
Length = 360
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 140/225 (62%), Positives = 174/225 (77%)
Query: 34 DIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAEQGQYKPCTVDRAPL 93
+ G E +K+ G+ QM LFS +EC A+E IDEV S A++G Y+ TVDRAPL
Sbjct: 38 EAGSEPEAEEEEARKVRSGIRQMRLFSPDECAAIESKIDEVVSRADKGLYQEHTVDRAPL 97
Query: 94 RNKYFFGEGYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYINS 153
RNKYFFGEGYTYG+QL R+G G ERLYP+GEVD IP W+ LVI +L + ++P ++NS
Sbjct: 98 RNKYFFGEGYTYGAQLQRRGPGQERLYPKGEVDEIPGWVHELVIRRLVERRIIPEGFVNS 157
Query: 154 AVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQ 213
AVINDYQPGGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPV +LPV+
Sbjct: 158 AVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVFFLPVR 217
Query: 214 RGCVTLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAPRLTL 258
RG VT+L +AA+ ITHC+RPQD + RRAV++LR+ APRL +
Sbjct: 218 RGSVTVLSGYAADEITHCIRPQDIKERRAVVILRKTRTEAPRLEM 262
>RGD|1309496 [details] [associations]
symbol:Alkbh5 "alkB, alkylation repair homolog 5 (E. coli)"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0006397 "mRNA processing" evidence=ISO;ISS] [GO:0006406 "mRNA
export from nucleus" evidence=ISO;ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0016607 "nuclear speck"
evidence=ISO;ISS] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0035515
"oxidative RNA demethylase activity" evidence=ISO;ISS] [GO:0035553
"oxidative single-stranded RNA demethylation" evidence=ISO;ISS]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR005123
RGD:1309496 GO:GO:0016706 Pfam:PF13532 CTD:54890
GeneTree:ENSGT00390000009298 KO:K10767 OMA:GAKRKYQ
OrthoDB:EOG45B1FW IPI:IPI00369534 RefSeq:NP_001178572.1
UniGene:Rn.8697 Ensembl:ENSRNOT00000034006 GeneID:303193
KEGG:rno:303193 UCSC:RGD:1309496 NextBio:650831 Uniprot:D3ZKD3
Length = 395
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 143/236 (60%), Positives = 175/236 (74%)
Query: 21 KNRYSRNQRSSPYDIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAEQ 80
K +Y + D + + E +K+ G+ Q+ LFS +EC +E IDEV S AE+
Sbjct: 58 KRKYQEDSDPERSDYEEHQLQKEEEARKVKSGIRQIRLFSQDECSKIEARIDEVVSRAEK 117
Query: 81 GQYKPCTVDRAPLRNKYFFGEGYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKL 140
G Y TVDRAPLRNKYFFGEGYTYG+QL ++G G ERLYP G+VD IP W+ LVI KL
Sbjct: 118 GLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPEWVHQLVIQKL 177
Query: 141 EQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKP 200
+ V+P ++NSAVINDYQPGGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKP
Sbjct: 178 VEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKP 237
Query: 201 IRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAPRL 256
IRVSEPVL LPV+RG VT+L +AA+ ITHC+RPQD + RRAVI+LR+ APRL
Sbjct: 238 IRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRL 293
>MGI|MGI:2144489 [details] [associations]
symbol:Alkbh5 "alkB, alkylation repair homolog 5 (E. coli)"
species:10090 "Mus musculus" [GO:0001666 "response to hypoxia"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA
processing" evidence=ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=ISO] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0035515 "oxidative RNA demethylase activity"
evidence=ISO] [GO:0035553 "oxidative single-stranded RNA
demethylation" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR005123 MGI:MGI:2144489 GO:GO:0046872
GO:GO:0016706 GO:GO:0016702 Pfam:PF13532 CTD:54890
GeneTree:ENSGT00390000009298 KO:K10767 OMA:GAKRKYQ eggNOG:NOG264303
HOGENOM:HOG000007505 HOVERGEN:HBG080833 OrthoDB:EOG45B1FW
EMBL:AK053695 EMBL:AK053700 EMBL:AK162072 EMBL:AK163294
EMBL:AL596386 EMBL:BC052076 IPI:IPI00453512 RefSeq:NP_766531.2
UniGene:Mm.262056 ProteinModelPortal:Q3TSG4 PhosphoSite:Q3TSG4
PaxDb:Q3TSG4 PRIDE:Q3TSG4 Ensembl:ENSMUST00000044250 GeneID:268420
KEGG:mmu:268420 UCSC:uc007jgd.2 InParanoid:Q3TSG4 NextBio:392283
Bgee:Q3TSG4 CleanEx:MM_ALKBH5 Genevestigator:Q3TSG4
GermOnline:ENSMUSG00000042650 Uniprot:Q3TSG4
Length = 395
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 143/236 (60%), Positives = 175/236 (74%)
Query: 21 KNRYSRNQRSSPYDIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAEQ 80
K +Y + D + + E +K+ G+ Q+ LFS +EC +E IDEV S AE+
Sbjct: 58 KRKYQEDSDPERSDYEEHQLQKEEEARKVKSGIRQIRLFSQDECSKIEARIDEVVSRAEK 117
Query: 81 GQYKPCTVDRAPLRNKYFFGEGYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKL 140
G Y TVDRAPLRNKYFFGEGYTYG+QL ++G G ERLYP G+VD IP W+ LVI KL
Sbjct: 118 GLYNEHTVDRAPLRNKYFFGEGYTYGAQLQKRGPGQERLYPPGDVDEIPDWVHQLVIQKL 177
Query: 141 EQMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKP 200
+ V+P ++NSAVINDYQPGGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKP
Sbjct: 178 VEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKP 237
Query: 201 IRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAPRL 256
IRVSEPVL LPV+RG VT+L +AA+ ITHC+RPQD + RRAVI+LR+ APRL
Sbjct: 238 IRVSEPVLSLPVRRGSVTVLSGYAADEITHCIRPQDIKERRAVIILRKTRLDAPRL 293
>ZFIN|ZDB-GENE-061013-602 [details] [associations]
symbol:alkbh5 "alkB, alkylation repair homolog 5
(E. coli)" species:7955 "Danio rerio" [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA;ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0035515 "oxidative RNA demethylase activity"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0016607 "nuclear
speck" evidence=ISS] [GO:0001666 "response to hypoxia"
evidence=ISS] [GO:0006397 "mRNA processing" evidence=ISS]
[GO:0035553 "oxidative single-stranded RNA demethylation"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] InterPro:IPR005123 ZFIN:ZDB-GENE-061013-602
GO:GO:0016706 Pfam:PF13532 CTD:54890 GeneTree:ENSGT00390000009298
KO:K10767 OMA:GAKRKYQ EMBL:AL928835 EMBL:BC124804 IPI:IPI00802177
RefSeq:NP_001070855.1 UniGene:Dr.81672 ProteinModelPortal:Q08BA6
STRING:Q08BA6 PRIDE:Q08BA6 Ensembl:ENSDART00000091683 GeneID:570158
KEGG:dre:570158 eggNOG:NOG264303 HOGENOM:HOG000007505
HOVERGEN:HBG080833 InParanoid:Q08BA6 OrthoDB:EOG45B1FW
NextBio:20890003 Bgee:Q08BA6 Uniprot:Q08BA6
Length = 352
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 145/258 (56%), Positives = 187/258 (72%)
Query: 22 NRYSRNQRSSPYDIGQSKHHARELRQKILQGVNQMSLFSHEECLALERNIDEVSSLAEQG 81
N R R S D + + +++ G+ Q S+F+ EEC +E IDEV + A++G
Sbjct: 26 NGEKRKYRESDDDESEYEERRDAEARRVKSGIKQASIFTLEECARIEAKIDEVVAKADKG 85
Query: 82 QYKPCTVDRAPLRNKYFFGEGYTYGSQLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLE 141
Y+ TVDRAPLRNKYFFGEGYTYG+QL ++G G ERLY +GEVD IP W+ LVI +L
Sbjct: 86 LYREHTVDRAPLRNKYFFGEGYTYGAQLEKRGPGQERLYSKGEVDDIPDWVHELVIDRLV 145
Query: 142 QMGVVPPNYINSAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPI 201
GV+P ++NSAVINDYQPGGCIVSH+DP HIF+RPI+S+S FSDSALCFGCKF FKPI
Sbjct: 146 THGVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSVSFFSDSALCFGCKFLFKPI 205
Query: 202 RVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAPRL-TLSQ 260
RVSEPVL+LPV+RG VT+L +AA+ ITHC+RPQD + RRAVI+LR+ APRL + S
Sbjct: 206 RVSEPVLHLPVRRGSVTVLSGYAADDITHCIRPQDIKERRAVIILRKTRADAPRLDSNSL 265
Query: 261 TPRVKPYHSLYDVQARES 278
+P + + ++A+ S
Sbjct: 266 SPSIVSPKRRHILKAKRS 283
>UNIPROTKB|I3LGP5 [details] [associations]
symbol:ALKBH5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016706 "oxidoreductase activity, acting on paired
donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR005123
GO:GO:0016706 Pfam:PF13532 GeneTree:ENSGT00390000009298 OMA:RKFRESD
Ensembl:ENSSSCT00000024532 Uniprot:I3LGP5
Length = 327
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 88/151 (58%), Positives = 107/151 (70%)
Query: 119 LYPEGEVDPIPAWIQSLVITKLEQMG-----VVPPNYIN------SAVINDYQPGGCIVS 167
LY E VD P + +L++ G + PP ++ SAVINDYQPGGCIVS
Sbjct: 74 LYNEHTVDRAPLRNKYFYGAQLQKRGPGQERLYPPGDVDEIPEWDSAVINDYQPGGCIVS 133
Query: 168 HI--DPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAA 225
H+ DP HIF+RPI+S+S FSDSALCFGCKF FKPIRVSEPVL LPV+RG VT+L +AA
Sbjct: 134 HVHVDPIHIFERPIVSVSFFSDSALCFGCKFQFKPIRVSEPVLSLPVRRGSVTVLSGYAA 193
Query: 226 NGITHCVRPQDTQHRRAVILLRRVLPHAPRL 256
+ ITHC+RPQD + RRAVI+LR+ APRL
Sbjct: 194 DEITHCIRPQDIKERRAVIILRKTRLDAPRL 224
Score = 206 (77.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 45/85 (52%), Positives = 54/85 (63%)
Query: 62 EECLALERNIDEVSSLAEQGQYKPCTVDRAPLRNKYFFGEGYTYGSQLVRKGLGNERLYP 121
+EC +E IDEV S AE+G Y TVDRAPLRNKYF YG+QL ++G G ERLYP
Sbjct: 54 DECAKIEARIDEVVSRAEKGLYNEHTVDRAPLRNKYF------YGAQLQKRGPGQERLYP 107
Query: 122 EGEVDPIPAWIQSLVITKLEQMGVV 146
G+VD IP W S VI + G +
Sbjct: 108 PGDVDEIPEW-DSAVINDYQPGGCI 131
>TAIR|locus:2060964 [details] [associations]
symbol:AT2G17970 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR005123 Pfam:PF03171
PROSITE:PS51471 GO:GO:0009506 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016706 EMBL:AC006201
HOGENOM:HOG000015189 EMBL:BT010563 EMBL:AK175991 IPI:IPI00529507
PIR:F84558 PIR:T00828 RefSeq:NP_179387.1 UniGene:At.40074
ProteinModelPortal:Q9SL49 PRIDE:Q9SL49 ProMEX:Q9SL49
EnsemblPlants:AT2G17970.1 GeneID:816307 KEGG:ath:AT2G17970
TAIR:At2g17970 InParanoid:Q9SL49 OMA:NPERSSE PhylomeDB:Q9SL49
ProtClustDB:CLSN2683920 ArrayExpress:Q9SL49 Genevestigator:Q9SL49
Uniprot:Q9SL49
Length = 507
Score = 153 (58.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 69/245 (28%), Positives = 111/245 (45%)
Query: 21 KNRYSRNQRSSP--YDIGQSKHHA--RELRQKILQGVNQMSLFSHE-ECLALERNIDEVS 75
K + SR+QR + ++ + K ++ KI+ ++ + L + + +R +D+V
Sbjct: 177 KPKLSRDQRENLRLINVKRKKDFICLERVKGKIVNVLDGLELHTGVFSAVEQKRIVDQVY 236
Query: 76 SLAEQG---QYKPCTVDRAP---LRNK----YFFGEGYTYGSQLVRKGLGNERLYPEGEV 125
L E+G + K T AP +R K FG Y Y R G L E EV
Sbjct: 237 QLQEKGRRGELKKRTFT-APHKWMRGKGRETIQFGCCYNYAPD--RAGNPPGILQRE-EV 292
Query: 126 DPIPAWIQSLVITKLEQMGVVPPNYI-NSAVINDYQPGGCIVSHIDPPHIFDRPIISLSL 184
DP+P + ++I KL + V+PP + +S ++N Y G CI HID H F RP ++S
Sbjct: 293 DPLPHLFK-VIIRKLIKWHVLPPTCVPDSCIVNIYDEGDCIPPHIDN-HDFLRPFCTISF 350
Query: 185 FSDSALCFGCKFNFKPIRVSEPVLYLPVQRGCVTLLRDFAANGITHCVRPQDTQHRRAVI 244
S+ + FG + +P+ G V +L A+ HCV T +R I
Sbjct: 351 LSECDILFGSNLKVEGPGDFSGSYSIPLPVGSVLVLNGNGADVAKHCVPAVPT--KRISI 408
Query: 245 LLRRV 249
R++
Sbjct: 409 TFRKM 413
>TAIR|locus:2028486 [details] [associations]
symbol:AT1G48980 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR005123 PROSITE:PS51471 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0016706 Pfam:PF13532
HOGENOM:HOG000015189 EMBL:AY735531 EMBL:AY924702 IPI:IPI00526630
RefSeq:NP_175328.2 UniGene:At.50945 ProteinModelPortal:Q5XVJ1
EnsemblPlants:AT1G48980.1 GeneID:841320 KEGG:ath:AT1G48980
TAIR:At1g48980 InParanoid:Q5XVJ1 OMA:GILKHET PhylomeDB:Q5XVJ1
ProtClustDB:CLSN2681398 Genevestigator:Q5XVJ1 Uniprot:Q5XVJ1
Length = 331
Score = 149 (57.5 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 53/204 (25%), Positives = 89/204 (43%)
Query: 49 ILQGVN-QMSLFSHEECLALERNIDEVSSLAEQGQYKPCTVDRAPLRNKYFFGEGYTYGS 107
IL+G+ +F+ E + + E+ ++G+ K + R+ FG + Y +
Sbjct: 100 ILEGLELHTEVFNAAEQRRIVDKVCELQEKVQKGELKRAFTAQGKGRSTIQFGCCFNYRT 159
Query: 108 QLVRKGLGNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYI-NSAVINDYQPGGCIV 166
G + VDP+P + ++I +L + V+PP + + V+N Y G CI
Sbjct: 160 SKTGNLAG---ILKHETVDPLPHLFK-VIIRRLVKWHVLPPTCVPDCCVVNIYDEGDCIP 215
Query: 167 SHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLY-LPVQRGCVTLLRDFAA 225
HID H F RP ++S S+ + FG + Y LP+ G V +L A
Sbjct: 216 PHIDH-HDFLRPFCTVSFLSECNILFGSNLKVEETGEYSGGSYSLPLPVGSVLVLNGNGA 274
Query: 226 NGITHCVRPQDTQHRRAVILLRRV 249
+ HCV T +R I R++
Sbjct: 275 DVAKHCVPEVPT--KRISITFRKM 296
>TAIR|locus:2135124 [details] [associations]
symbol:AT4G36090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005123
PROSITE:PS51471 EMBL:CP002687 GO:GO:0016706 Pfam:PF13532
EMBL:BT020221 EMBL:BT021118 IPI:IPI00657386 RefSeq:NP_001031794.1
UniGene:At.50399 ProteinModelPortal:Q5RJC7 PRIDE:Q5RJC7
EnsemblPlants:AT4G36090.3 GeneID:829765 KEGG:ath:AT4G36090
TAIR:At4g36090 HOGENOM:HOG000015189 InParanoid:Q5RJC7
PhylomeDB:Q5RJC7 ProtClustDB:CLSN2681466 Genevestigator:Q5RJC7
Uniprot:Q5RJC7
Length = 520
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 60/211 (28%), Positives = 99/211 (46%)
Query: 49 ILQGVN-QMSLFSHEECLALERNIDEVSSLAEQGQYKPCTVDRAPLRNKYFFGEGYT--- 104
IL+G+ +FS E + + E+ +G+ + T AP +K+ G+G
Sbjct: 216 ILEGLELHTGVFSAVEQKKIVDFVYELQEKGRRGELRERTFT-AP--HKWMRGKGRVTIQ 272
Query: 105 YGS--QLVRKGLGNER-LYPEGEVDPIPAWIQSLVITKLEQMGVVPPNYI-NSAVINDYQ 160
+G GN + G+VDP+P+ I ++I +L V+PP + +S ++N Y+
Sbjct: 273 FGCCYNYAPDKAGNPPGILQRGDVDPMPS-IFKVIIKRLVGWHVLPPTCVPDSCIVNIYE 331
Query: 161 PGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSE-PVLY-LPVQRGCVT 218
CI HID H F RP ++S S+ + FG N K + E Y +P+ G V
Sbjct: 332 EDDCIPPHIDN-HDFLRPFCTVSFLSECNILFGS--NLKVLGPGEFSGSYSIPLPVGSVL 388
Query: 219 LLRDFAANGITHCVRPQDTQHRRAVILLRRV 249
+L+ A+ HCV T +R I R++
Sbjct: 389 VLKGNGADVAKHCVPAVPT--KRISITFRKM 417
>TAIR|locus:2066385 [details] [associations]
symbol:AT2G48080 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR005123 Pfam:PF03171
EMBL:CP002685 GO:GO:0016706 IPI:IPI00540530 RefSeq:NP_182329.2
UniGene:At.43581 ProteinModelPortal:F4IN63 PRIDE:F4IN63
EnsemblPlants:AT2G48080.1 GeneID:819420 KEGG:ath:AT2G48080
OMA:VMCPSPN ArrayExpress:F4IN63 Uniprot:F4IN63
Length = 438
Score = 132 (51.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 57/224 (25%), Positives = 103/224 (45%)
Query: 38 SKHHARELRQKILQGVN-QMSLFSHEECLALERNIDEVSSLAEQGQYKPCTVDRAPLRNK 96
+K H R +++G+ +F+ + L + +D ++ L E G+ + + L NK
Sbjct: 153 AKEHVRGHTANVVKGLKLYQDVFTRPQ---LSKLLDSINQLREAGRNHQLSGETFVLFNK 209
Query: 97 YFFGEGYTYGSQLVRKGL---GNERLYPEGEVDPIPAWIQSLVITKLEQMGVVPP-NYIN 152
G +L++ G+ GN E V+PIP +QS VI L Q ++P N
Sbjct: 210 NTKGTK----RELLQLGVPIFGNTT--DEHSVEPIPTLVQS-VIDHLLQWRLIPEYKRPN 262
Query: 153 SAVINDYQPGGCIVSHIDPPHIFDRPIISLSLFSDSALCFGCKFNFKPIRVSEPVLYLPV 212
VIN + PPH+ D+PI +L L S+S + FG + L LP+
Sbjct: 263 GCVINFFDEDEHSQPFQKPPHV-DQPISTLVL-SESTMVFGHRLGVDNDGNFRGSLTLPL 320
Query: 213 QRGCVTLLRDFAANGITHCVRPQDTQHRRAVILLRRVLPHAPRL 256
+ G + ++R +A+ H + P + ++R I ++ P + ++
Sbjct: 321 KEGSLLVMRGNSADMARHVMCP--SPNKRVAITFFKLKPDSGKV 362
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 307 291 0.00089 115 3 11 22 0.50 33
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 603 (64 KB)
Total size of DFA: 211 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.64u 0.08s 25.72t Elapsed: 00:00:03
Total cpu time: 25.65u 0.08s 25.73t Elapsed: 00:00:04
Start: Thu Aug 15 11:57:46 2013 End: Thu Aug 15 11:57:50 2013