Query psy7740
Match_columns 184
No_of_seqs 187 out of 1092
Neff 5.8
Searched_HMMs 13730
Date Fri Aug 16 17:37:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7740.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7740hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1mvla_ c.34.1.1 (A:) 4'-phosp 99.9 3E-27 2.2E-31 190.6 5.4 97 77-182 2-98 (182)
2 d1qzua_ c.34.1.1 (A:) 4'-phosp 99.9 1.6E-26 1.2E-30 186.2 3.7 95 76-182 4-101 (181)
3 d1g5qa_ c.34.1.1 (A:) Epidermi 99.9 1.3E-25 9.6E-30 179.7 5.0 90 77-182 3-93 (174)
4 d1p3y1_ c.34.1.1 (1:) MrsD {Ba 99.9 2E-25 1.5E-29 179.8 3.3 93 76-182 6-99 (183)
5 d1sbza_ c.34.1.1 (A:) Probable 99.8 6.6E-23 4.8E-27 164.6 2.7 93 78-182 2-97 (186)
6 d2hp8a_ a.17.1.1 (A:) p8-MTCP1 68.8 2.6 0.00019 27.0 3.7 33 29-61 7-39 (68)
7 d1u97a_ a.17.1.2 (A:) Cytochro 59.1 4.8 0.00035 25.7 3.6 35 27-61 24-58 (69)
8 d1ixca2 c.94.1.1 (A:90-294) Ly 51.4 5.3 0.00039 26.7 3.1 37 79-121 4-40 (205)
9 d1pn3a_ c.87.1.5 (A:) TDP-epi- 50.7 3.9 0.00028 31.1 2.5 46 78-131 2-48 (391)
10 d1k92a1 c.26.2.1 (A:1-188) Arg 48.4 6.3 0.00046 26.7 3.1 26 75-103 9-34 (188)
11 d1i6aa_ c.94.1.1 (A:) Hydrogen 47.6 6.2 0.00045 27.1 3.0 35 78-118 6-40 (212)
12 d1u97a_ a.17.1.2 (A:) Cytochro 46.0 6.8 0.0005 25.0 2.6 21 27-47 45-65 (69)
13 d1rrva_ c.87.1.5 (A:) TDP-vanc 43.5 5.8 0.00042 30.2 2.5 44 78-129 2-46 (401)
14 d1y1pa1 c.2.1.2 (A:2-343) Alde 42.9 5.7 0.00042 30.8 2.4 41 61-118 2-42 (342)
15 d1iira_ c.87.1.5 (A:) UDP-gluc 42.6 9.9 0.00072 28.5 3.7 46 78-131 2-48 (401)
16 d1ni5a1 c.26.2.5 (A:0-226) tRN 42.5 8.7 0.00063 28.4 3.3 36 76-117 13-48 (227)
17 d1i24a_ c.2.1.2 (A:) Sulfolipi 38.3 7.3 0.00053 30.5 2.3 31 76-117 1-31 (393)
18 d1rkxa_ c.2.1.2 (A:) CDP-gluco 36.5 8.4 0.00061 29.4 2.4 33 76-119 8-40 (356)
19 d1vl2a1 c.26.2.1 (A:2-169) Arg 36.1 12 0.00089 24.5 2.9 31 77-118 2-32 (168)
20 d1r0ka2 c.2.1.3 (A:3-126,A:265 33.9 10 0.00074 27.1 2.3 22 79-101 6-27 (150)
21 d1ppjh_ f.28.1.1 (H:) Non-heme 33.4 16 0.0012 22.8 2.9 35 27-61 16-53 (66)
22 d1f0ka_ c.87.1.2 (A:) Peptidog 32.6 15 0.0011 27.3 3.2 43 78-128 2-47 (351)
23 d1utha_ c.94.1.1 (A:) LysR-typ 32.1 11 0.00083 26.0 2.3 37 76-118 11-47 (219)
24 d1xjca_ c.37.1.10 (A:) Molybdo 31.9 10 0.00073 26.1 1.9 31 81-119 4-37 (165)
25 d2fyia1 c.94.1.1 (A:88-307) Ly 31.0 11 0.00082 26.3 2.1 39 78-122 7-45 (220)
26 d2esna2 c.94.1.1 (A:92-303) Pr 27.8 14 0.001 25.2 2.1 36 77-118 8-43 (212)
27 d1orra_ c.2.1.2 (A:) CDP-tyvel 27.6 20 0.0014 26.6 3.1 26 83-117 5-30 (338)
28 d1yvca1 b.40.4.12 (A:1-69) Hyp 27.1 16 0.0012 22.6 2.1 26 4-29 1-32 (69)
29 d1kjna_ c.115.1.1 (A:) Hypothe 26.7 31 0.0023 24.8 3.9 29 91-127 19-47 (152)
30 d1q0qa2 c.2.1.3 (A:1-125,A:275 26.3 13 0.00095 26.6 1.7 22 79-101 5-26 (151)
31 d1p80a1 c.23.16.3 (A:598-753) 26.2 33 0.0024 23.5 4.0 38 76-121 3-40 (156)
32 d1wy5a1 c.26.2.5 (A:1-216) Til 25.6 13 0.00095 27.4 1.7 28 75-102 23-50 (216)
33 d1jjva_ c.37.1.1 (A:) Dephosph 25.2 9.6 0.0007 27.5 0.8 24 79-103 3-26 (205)
34 d1vhta_ c.37.1.1 (A:) Dephosph 25.1 10 0.00073 27.5 0.9 25 78-103 3-27 (208)
35 d1jmva_ c.26.2.4 (A:) Universa 25.1 20 0.0014 23.3 2.4 26 77-102 3-28 (140)
36 d1n7ha_ c.2.1.2 (A:) GDP-manno 23.6 23 0.0017 26.4 2.9 28 83-119 6-33 (339)
37 d1uf9a_ c.37.1.1 (A:) Dephosph 23.5 9.4 0.00069 26.8 0.4 25 78-103 3-27 (191)
38 d1rz3a_ c.37.1.6 (A:) Hypothet 23.0 14 0.001 25.2 1.4 27 77-103 21-50 (198)
39 d1sb8a_ c.2.1.2 (A:) UDP-N-ace 22.9 23 0.0017 26.8 2.8 28 78-117 18-46 (341)
40 d2gz1a1 c.2.1.3 (A:2-127,A:330 22.6 24 0.0018 24.5 2.6 35 76-120 1-37 (154)
41 d1q77a_ c.26.2.4 (A:) Hypothet 22.1 16 0.0012 23.6 1.4 29 74-102 2-30 (138)
42 d1eq2a_ c.2.1.2 (A:) ADP-L-gly 22.0 28 0.0021 25.1 3.0 29 81-117 2-30 (307)
43 d2z3va1 c.26.2.4 (A:2-136) Hyp 21.6 30 0.0022 22.3 2.9 26 77-102 2-27 (135)
44 d1qyda_ c.2.1.2 (A:) Pinoresin 21.3 22 0.0016 25.9 2.2 28 79-118 7-34 (312)
45 d1al3a_ c.94.1.1 (A:) Cofactor 21.0 20 0.0014 25.7 1.8 38 78-121 7-44 (237)
46 d1udca_ c.2.1.2 (A:) Uridine d 20.5 27 0.002 26.5 2.7 26 83-117 5-30 (338)
47 d1hdoa_ c.2.1.2 (A:) Biliverdi 20.4 36 0.0026 23.9 3.2 29 79-119 7-35 (205)
48 d1dtdb_ g.30.1.1 (B:) Carboxyp 20.0 10 0.00074 22.8 -0.0 13 18-30 18-30 (61)
No 1
>d1mvla_ c.34.1.1 (A:) 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.93 E-value=3e-27 Score=190.56 Aligned_cols=97 Identities=45% Similarity=0.809 Sum_probs=86.7
Q ss_pred hhhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEcCchHHHhcCcCCCCCCCeeeeCCccchhcccCCCCccc
Q psy7740 77 FNILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVMTKHAFHFVPDLPHKPNIRFYSDDDEWISWEKRGDPVLH 156 (184)
Q Consensus 77 f~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~VilT~sA~~fv~~~~l~~~~~V~~d~de~~~~~~~~~~~~H 156 (184)
.||++|+|||+|++|+++|++.|++ | + +|+||+|++|++|+++.+++.....+.+.++|..|.+.++++.|
T Consensus 2 ~kIllgvtGsiAayk~~~L~r~L~~-~--~------~V~vv~T~~A~~fi~~~~l~~~~~~~~~~~~~~~~~~~~~~~~H 72 (182)
T d1mvla_ 2 PRVLLAASGSVAAIKFGNLCHCFTE-W--A------EVRAVVTKSSLHFLDKLSLPQEVTLYTDEDEWSSWNKIGDPVLH 72 (182)
T ss_dssp CEEEEEECSSGGGGGHHHHHHHHHT-T--S------EEEEEECTGGGGTCCGGGSCTTCEEECTTHHHHHCSSTTSCCHH
T ss_pred CEEEEEEecHHHHHHHHHHHHHHhc-C--C------eEEEEEchhHHHhhhhhhhceeeeeeecccccccccccCCchhh
Confidence 5899999999999999999999976 6 6 99999999999999999998555666666678777666677899
Q ss_pred ccccccccEEEEcccccHHHHHHhcC
Q psy7740 157 IELSKWCDIIVLAPLDANTLAKLATY 182 (184)
Q Consensus 157 i~l~~~aD~~VVaPaSaNTlAKiA~~ 182 (184)
|+|++|+|+|||||||||||||+|+|
T Consensus 73 i~la~~aD~~iVaPATANtiaK~A~G 98 (182)
T d1mvla_ 73 IELRRWADVLVIAPLSANTLGKIAGG 98 (182)
T ss_dssp HHHHHHCSEEEEEEECHHHHHHHHHT
T ss_pred hhhhccccEEEEEeccHHHHHHHHcC
Confidence 99999999999999999999999997
No 2
>d1qzua_ c.34.1.1 (A:) 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=1.6e-26 Score=186.15 Aligned_cols=95 Identities=41% Similarity=0.702 Sum_probs=79.9
Q ss_pred hhhhhhcCCCchHHhHHHHHHHHHHh-ccccccccccceEEEEcCchHHHhcCcCCCC--CCCeeeeCCccchhcccCCC
Q psy7740 76 EFNILLCCTGSVATIKLPELIEQIEQ-LQYEFNKIMIINLNVVMTKHAFHFVPDLPHK--PNIRFYSDDDEWISWEKRGD 152 (184)
Q Consensus 76 Gf~illg~tGSiaa~k~~~li~~L~~-~g~~~~~~~~~~V~VilT~sA~~fv~~~~l~--~~~~V~~d~de~~~~~~~~~ 152 (184)
++||++|+|||||+||+++++++|++ .| + +|+|++|++|++|++++.++ ++++++. |..|.+.+.
T Consensus 4 k~~Ill~vtGSIAayk~~~lv~~L~~~~g--~------~V~vi~T~~A~~Fv~p~~~~~~~~~~~~~----~~~~~~~~~ 71 (181)
T d1qzua_ 4 KFHVLVGVTGSVAALKLPLLVSKLLDIPG--L------EVAVVTTERAKHFYSPQDIPVTLYSDADE----WEMWKSRSD 71 (181)
T ss_dssp SEEEEEEECSSGGGGTHHHHHHHHC---C--E------EEEEEECTGGGGSSCGGGSCSCEECHHHH----HHTCSSTTS
T ss_pred CCEEEEEEecHHHHHHHHHHHHHHHHHcC--C------EEEEEEChHHHhhcCcccceeeccCCccc----ccccccccc
Confidence 35899999999999999999999977 46 7 99999999999999999886 3444433 223444456
Q ss_pred CcccccccccccEEEEcccccHHHHHHhcC
Q psy7740 153 PVLHIELSKWCDIIVLAPLDANTLAKLATY 182 (184)
Q Consensus 153 ~~~Hi~l~~~aD~~VVaPaSaNTlAKiA~~ 182 (184)
++.||+|++|+|+|||||||||||||+|+|
T Consensus 72 ~~~Hi~La~~aDl~lVaPATANtiaK~A~G 101 (181)
T d1qzua_ 72 PVLHIDLRRWADLLLVAPLDANTLGKVASG 101 (181)
T ss_dssp CCHHHHHHTTCSEEEEEEECHHHHHHHHTT
T ss_pred ccceEEecccccEEEEEeCcHHHHHHHhcc
Confidence 789999999999999999999999999997
No 3
>d1g5qa_ c.34.1.1 (A:) Epidermin modifying enzyme (peptidyl-cysteine decarboxylase) EpiD {Staphylococcus epidermidis [TaxId: 1282]}
Probab=99.91 E-value=1.3e-25 Score=179.67 Aligned_cols=90 Identities=21% Similarity=0.320 Sum_probs=79.0
Q ss_pred hhhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEcCchHHHhcCcCCCC-CCCeeeeCCccchhcccCCCCcc
Q psy7740 77 FNILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVMTKHAFHFVPDLPHK-PNIRFYSDDDEWISWEKRGDPVL 155 (184)
Q Consensus 77 f~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~VilT~sA~~fv~~~~l~-~~~~V~~d~de~~~~~~~~~~~~ 155 (184)
.||++|+|||+|++|+++++++|++.| + +|+|++|++|++|++++.++ ....+|++..+ ...+
T Consensus 3 ~kIll~vtGsiaa~k~~~li~~L~~~g--~------~V~vv~T~sA~~fv~~~~l~~~~~~~~~~~~~--------~~~~ 66 (174)
T d1g5qa_ 3 GKLLICATASINVININHYIVELKQHF--D------EVNILFSPSSKNFINTDVLKLFCDNLYDEIKD--------PLLN 66 (174)
T ss_dssp SCEEEEECSCGGGGGHHHHHHHHTTTB--S------CEEEEECGGGGGTSCGGGGGGTSSCEECTTTC--------TTCC
T ss_pred CeEEEEEECHHHHHHHHHHHHHHHHCC--C------eEEEEEehhhhhhccHhHHhHhhCcccccccc--------cccc
Confidence 369999999999999999999999998 7 99999999999999999987 23346655322 2368
Q ss_pred cccccccccEEEEcccccHHHHHHhcC
Q psy7740 156 HIELSKWCDIIVLAPLDANTLAKLATY 182 (184)
Q Consensus 156 Hi~l~~~aD~~VVaPaSaNTlAKiA~~ 182 (184)
||++++|+|+|||||||||||||+|+|
T Consensus 67 hi~l~~~aD~~lVaPaTaNtlaKiA~G 93 (174)
T d1g5qa_ 67 NINIVENHEYILVLPASANTINKIANG 93 (174)
T ss_dssp HHHHHHTCSEEEEEEECHHHHHHHHTT
T ss_pred ceeeccccceEEEEecCHHHHHHHHHh
Confidence 999999999999999999999999998
No 4
>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}
Probab=99.90 E-value=2e-25 Score=179.83 Aligned_cols=93 Identities=26% Similarity=0.433 Sum_probs=82.1
Q ss_pred hhhhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEcCchHHHhcCcCCCC-CCCeeeeCCccchhcccCCCCc
Q psy7740 76 EFNILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVMTKHAFHFVPDLPHK-PNIRFYSDDDEWISWEKRGDPV 154 (184)
Q Consensus 76 Gf~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~VilT~sA~~fv~~~~l~-~~~~V~~d~de~~~~~~~~~~~ 154 (184)
|+||++|||||+|+++++++++.|++.| + +|+||+|++|++|++++.++ ...++|+|.++ .+...
T Consensus 6 ~KkIllgvTGsiaa~k~~~l~~~L~~~g--~------eV~vv~T~~A~~fi~~~~~~~l~~~~~~~~~~------~~~~~ 71 (183)
T d1p3y1_ 6 DKKLLIGICGSISSVGISSYLLYFKSFF--K------EIRVVMTKTAEDLIPAHTVSYFCDHVYSEHGE------NGKRH 71 (183)
T ss_dssp GCEEEEEECSCGGGGGTHHHHHHHTTTS--S------EEEEEECHHHHHHSCHHHHGGGSSEEECTTCS------SSCCC
T ss_pred CCEEEEEEeCHHHHHHHHHHHHHHHHCC--C------eEEEEEEcchhhhccHhHHHHhccceeecccc------ccccc
Confidence 7899999999999999999999999988 7 99999999999999998876 23467776322 23457
Q ss_pred ccccccccccEEEEcccccHHHHHHhcC
Q psy7740 155 LHIELSKWCDIIVLAPLDANTLAKLATY 182 (184)
Q Consensus 155 ~Hi~l~~~aD~~VVaPaSaNTlAKiA~~ 182 (184)
.|+++++|+|+|||||||+|||||+|+|
T Consensus 72 ~Hi~l~~~aD~~vIaPaTaNtlaKiA~G 99 (183)
T d1p3y1_ 72 SHVEIGRWADIYCIIPATANILGQTANG 99 (183)
T ss_dssp CHHHHHHHCSEEEEEEECHHHHHHHHTT
T ss_pred CceeccccccEEEEEecCHHHHHHHHhh
Confidence 8999999999999999999999999998
No 5
>d1sbza_ c.34.1.1 (A:) Probable aromatic acid decarboxylase Pad1 {Escherichia coli O157:H7 [TaxId: 83334]}
Probab=99.85 E-value=6.6e-23 Score=164.57 Aligned_cols=93 Identities=15% Similarity=0.100 Sum_probs=75.5
Q ss_pred hhhhcCCCchHHhHHHHHHHHHHhc-cccccccccceEEEEcCchHHHhcCcCCCC--CCCeeeeCCccchhcccCCCCc
Q psy7740 78 NILLCCTGSVATIKLPELIEQIEQL-QYEFNKIMIINLNVVMTKHAFHFVPDLPHK--PNIRFYSDDDEWISWEKRGDPV 154 (184)
Q Consensus 78 ~illg~tGSiaa~k~~~li~~L~~~-g~~~~~~~~~~V~VilT~sA~~fv~~~~l~--~~~~V~~d~de~~~~~~~~~~~ 154 (184)
||++|+|||++++++.++++.|++. | + +|+|++|++|++|++++.+. .+.+++.+. |..+ .....
T Consensus 2 rIllgITGas~a~~a~~ll~~L~~~~g--~------~V~vv~T~~A~~~i~~~~~~~~~~~~~~~~~--~~~~--~~~~~ 69 (186)
T d1sbza_ 2 KLIVGMTGATGAPLGVALLQALREMPN--V------ETHLVMSKWAKTTIELETPYSARDVAALADF--SHNP--ADQAA 69 (186)
T ss_dssp EEEEEECSSSCHHHHHHHHHHHHTCTT--C------EEEEEECHHHHHHHHHHSSCCHHHHHHTSSE--EECT--TCTTS
T ss_pred EEEEEEccHHHHHHHHHHHHHHHHhcC--C------EEEEEECchHHhhhhHhhhhhhhcCceeeec--ccCc--cccCC
Confidence 6899999999999999999999985 5 7 99999999999999998875 233333331 1111 12246
Q ss_pred ccccccccccEEEEcccccHHHHHHhcC
Q psy7740 155 LHIELSKWCDIIVLAPLDANTLAKLATY 182 (184)
Q Consensus 155 ~Hi~l~~~aD~~VVaPaSaNTlAKiA~~ 182 (184)
.|+++++|+|+|||||||||||||||||
T Consensus 70 ~~~sls~~aD~~vIaPaTanTlAKiA~G 97 (186)
T d1sbza_ 70 TISSGSFRTDGMIVIPCSMKTLAGIRAG 97 (186)
T ss_dssp GGGSTTSCCSEEEEEEECHHHHHHHHHT
T ss_pred ccccccccccEEEEccccHhHHHHHHcC
Confidence 7999999999999999999999999997
No 6
>d2hp8a_ a.17.1.1 (A:) p8-MTCP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.85 E-value=2.6 Score=27.03 Aligned_cols=33 Identities=21% Similarity=0.490 Sum_probs=30.0
Q ss_pred cHHHHHHHHHHHhhcCCCChhhHHHhhhhhhcc
Q psy7740 29 CKAFMTKYMICIKKNNSDSSACRDEIKDYLGCR 61 (184)
Q Consensus 29 c~~~~~~y~~cl~~~~~~~~~cr~~~k~yl~cr 61 (184)
|+..-=+--.||+.|+.+.++|.++..+.-+|=
T Consensus 7 Ck~~AC~IQ~CLq~N~Y~EskC~~~i~~L~~CC 39 (68)
T d2hp8a_ 7 CQKQACEIQKCLQANSYMESKCQAVIQELRKCC 39 (68)
T ss_dssp THHHHHHHHHHHHHTTTCTTTTHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 888888888999999999999999999987775
No 7
>d1u97a_ a.17.1.2 (A:) Cytochrome C oxidase copper chaperone, COX17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=59.13 E-value=4.8 Score=25.72 Aligned_cols=35 Identities=31% Similarity=0.525 Sum_probs=28.9
Q ss_pred CccHHHHHHHHHHHhhcCCCChhhHHHhhhhhhcc
Q psy7740 27 GDCKAFMTKYMICIKKNNSDSSACRDEIKDYLGCR 61 (184)
Q Consensus 27 ~~c~~~~~~y~~cl~~~~~~~~~cr~~~k~yl~cr 61 (184)
=-|+..+..-=.|+=.++.++.+|..+...|-+|-
T Consensus 24 CaCpetK~aRDeCil~~ge~~~~C~~lIeahk~CM 58 (69)
T d1u97a_ 24 CVCKPEKEERDTCILFNGQDSEKCKEFIEKYKECM 58 (69)
T ss_dssp SCCHHHHHHHHHHHHHTCTTSTTSHHHHHHHHHHH
T ss_pred ccCchhhhHhhHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 45788888888888888887788998888888884
No 8
>d1ixca2 c.94.1.1 (A:90-294) LysR-type regulatory protein CbnR {Ralstonia eutropha [TaxId: 106590]}
Probab=51.37 E-value=5.3 Score=26.74 Aligned_cols=37 Identities=11% Similarity=0.108 Sum_probs=28.6
Q ss_pred hhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEcCch
Q psy7740 79 ILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVMTKH 121 (184)
Q Consensus 79 illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~VilT~s 121 (184)
+-+|++++.+...++.+|..+++..|+. +|.+....+
T Consensus 4 lrIg~~~~~~~~~Lp~~l~~f~~~~P~v------~l~i~~~~~ 40 (205)
T d1ixca2 4 LSVAYFGTPIYRSLPLLLRAFLTSTPTA------TVSLTHMTK 40 (205)
T ss_dssp EEEEECSGGGGTHHHHHHHHHHHHCTTE------EEEEEECCH
T ss_pred EEEEEEhHHHHHHHHHHHHHHHHHCCCc------EEEEEECCC
Confidence 5578999999999999999999876555 666654433
No 9
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=50.71 E-value=3.9 Score=31.11 Aligned_cols=46 Identities=13% Similarity=0.203 Sum_probs=34.3
Q ss_pred hhhhcCCCchHHh-HHHHHHHHHHhccccccccccceEEEEcCchHHHhcCcCCC
Q psy7740 78 NILLCCTGSVATI-KLPELIEQIEQLQYEFNKIMIINLNVVMTKHAFHFVPDLPH 131 (184)
Q Consensus 78 ~illg~tGSiaa~-k~~~li~~L~~~g~~~~~~~~~~V~VilT~sA~~fv~~~~l 131 (184)
||++...||-|=+ -...+.++|.++| + +|.++.++.....+....+
T Consensus 2 ril~~~~gt~Ghi~P~laLA~~L~~rG--h------~V~~~~~~~~~~~v~~~g~ 48 (391)
T d1pn3a_ 2 RVLITGCGSRGDTEPLVALAARLRELG--A------DARMCLPPDYVERCAEVGV 48 (391)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHTT--C------EEEEEECGGGHHHHHHHTC
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHCC--C------EEEEEEChhhHhHHHHCCC
Confidence 5677667774434 4888999999999 7 9999988887776654433
No 10
>d1k92a1 c.26.2.1 (A:1-188) Argininosuccinate synthetase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=48.44 E-value=6.3 Score=26.66 Aligned_cols=26 Identities=15% Similarity=0.127 Sum_probs=18.9
Q ss_pred hhhhhhhcCCCchHHhHHHHHHHHHHhcc
Q psy7740 75 LEFNILLCCTGSVATIKLPELIEQIEQLQ 103 (184)
Q Consensus 75 LGf~illg~tGSiaa~k~~~li~~L~~~g 103 (184)
.|.+|+++++|++=+.-+ +..|++.|
T Consensus 9 ~gkKv~vA~SGGvDSsvl---l~lL~~~g 34 (188)
T d1k92a1 9 VGQRIGIAFSGGLDTSAA---LLWMRQKG 34 (188)
T ss_dssp TTSEEEEECCSSHHHHHH---HHHHHHTT
T ss_pred CCCEEEEEeCCCHHHHHH---HHHHHHcC
Confidence 377999999999766544 34566776
No 11
>d1i6aa_ c.94.1.1 (A:) Hydrogen peroxide-inducible genes LysR-type activator OxyR, regulatory domain {Escherichia coli [TaxId: 562]}
Probab=47.62 E-value=6.2 Score=27.11 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=28.5
Q ss_pred hhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEc
Q psy7740 78 NILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVM 118 (184)
Q Consensus 78 ~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~Vil 118 (184)
++-+|++.+++...++.+|..+++..|+. +|++..
T Consensus 6 ~lrig~~~~~~~~~lp~~l~~f~~~~P~v------~l~i~~ 40 (212)
T d1i6aa_ 6 PLHIGLIPTVGPYLLPHIIPMLHQTFPKL------EMYLHE 40 (212)
T ss_dssp EEEEEECTTTHHHHHHHHHHHHHHHCTTE------EEEEEE
T ss_pred EEEEEeEHHHHHHHHHHHHHHHHHHCCCc------EEEEEE
Confidence 56789999999999999999999886555 666554
No 12
>d1u97a_ a.17.1.2 (A:) Cytochrome C oxidase copper chaperone, COX17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.00 E-value=6.8 Score=24.96 Aligned_cols=21 Identities=33% Similarity=0.710 Sum_probs=18.4
Q ss_pred CccHHHHHHHHHHHhhcCCCC
Q psy7740 27 GDCKAFMTKYMICIKKNNSDS 47 (184)
Q Consensus 27 ~~c~~~~~~y~~cl~~~~~~~ 47 (184)
..|+.++..|-.|||.-+++.
T Consensus 45 ~~C~~lIeahk~CMr~~GF~v 65 (69)
T d1u97a_ 45 EKCKEFIEKYKECMKGYGFEV 65 (69)
T ss_dssp TTSHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHHcCCCC
Confidence 459999999999999988764
No 13
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}
Probab=43.54 E-value=5.8 Score=30.15 Aligned_cols=44 Identities=14% Similarity=0.216 Sum_probs=32.3
Q ss_pred hhhhcCCCchHHh-HHHHHHHHHHhccccccccccceEEEEcCchHHHhcCcC
Q psy7740 78 NILLCCTGSVATI-KLPELIEQIEQLQYEFNKIMIINLNVVMTKHAFHFVPDL 129 (184)
Q Consensus 78 ~illg~tGSiaa~-k~~~li~~L~~~g~~~~~~~~~~V~VilT~sA~~fv~~~ 129 (184)
||++...|+.|=+ -...+.++|+++| + +|+++.++.....++..
T Consensus 2 rIl~~~~gt~Ghv~P~l~lA~~L~~rG--h------~V~~~t~~~~~~~v~~~ 46 (401)
T d1rrva_ 2 RVLLSVCGTRGDVEIGVALADRLKALG--V------QTRMCAPPAAEERLAEV 46 (401)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHHHHTT--C------EEEEEECGGGHHHHHHH
T ss_pred eEEEECCCChhHHHHHHHHHHHHHHCC--C------EEEEEEChhhHHHHHHC
Confidence 5666666664433 4778999999999 8 99999888777665543
No 14
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}
Probab=42.93 E-value=5.7 Score=30.76 Aligned_cols=41 Identities=12% Similarity=0.300 Sum_probs=26.5
Q ss_pred cchhhhhhhhhhhhhhhhhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEc
Q psy7740 61 RMEKELMAKEDWEKLEFNILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVM 118 (184)
Q Consensus 61 rm~~~Lm~k~~~~~LGf~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~Vil 118 (184)
.||+..+.+ |++|+ |||+.| +-.-.+++.|.+.| + +|..++
T Consensus 2 ~~~~~~~~~------gk~Vl--VTG~sG-fIGs~l~~~Ll~~G--~------~V~~~v 42 (342)
T d1y1pa1 2 KIDNAVLPE------GSLVL--VTGANG-FVASHVVEQLLEHG--Y------KVRGTA 42 (342)
T ss_dssp CSTTCSSCT------TCEEE--EETTTS-HHHHHHHHHHHHTT--C------EEEEEE
T ss_pred CCCCCCCCC------cCEEE--EECCCC-HHHHHHHHHHHHCc--C------EEEEEe
Confidence 356666644 55664 466654 34567788888888 7 887654
No 15
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=42.64 E-value=9.9 Score=28.51 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=33.1
Q ss_pred hhhhcCCCchH-HhHHHHHHHHHHhccccccccccceEEEEcCchHHHhcCcCCC
Q psy7740 78 NILLCCTGSVA-TIKLPELIEQIEQLQYEFNKIMIINLNVVMTKHAFHFVPDLPH 131 (184)
Q Consensus 78 ~illg~tGSia-a~k~~~li~~L~~~g~~~~~~~~~~V~VilT~sA~~fv~~~~l 131 (184)
||++...|+-| ..-...+.++|++.| + +|.++.++.....+....+
T Consensus 2 kil~~~~gt~Gh~~P~lala~~L~~~G--h------~V~~~~~~~~~~~v~~~g~ 48 (401)
T d1iira_ 2 RVLLATCGSRGDTEPLVALAVRVRDLG--A------DVRMCAPPDCAERLAEVGV 48 (401)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHHHTT--C------EEEEEECGGGHHHHHHTTC
T ss_pred EEEEECCCChhHHHHHHHHHHHHHHCC--C------EEEEEeCcchHHHHHHcCC
Confidence 56666666633 334788999999999 8 9999988877666654433
No 16
>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=42.51 E-value=8.7 Score=28.40 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=26.1
Q ss_pred hhhhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEE
Q psy7740 76 EFNILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVV 117 (184)
Q Consensus 76 Gf~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~Vi 117 (184)
+.+|++|++|++=+.-+..++..+....+++ +|.++
T Consensus 13 ~kkvlva~SGG~DS~~Ll~ll~~~~~~~~~~------~l~~~ 48 (227)
T d1ni5a1 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGV------ALRAI 48 (227)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTC------EEEEE
T ss_pred CCcEEEEecCcHHHHHHHHHHHHHHHhCCCc------eEEEE
Confidence 3589999999998888787777776543224 66655
No 17
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=38.33 E-value=7.3 Score=30.54 Aligned_cols=31 Identities=6% Similarity=0.068 Sum_probs=20.3
Q ss_pred hhhhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEE
Q psy7740 76 EFNILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVV 117 (184)
Q Consensus 76 Gf~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~Vi 117 (184)
|.||+ |||+.|.+ .-.+++.|.+.| + +|.++
T Consensus 1 g~kIL--VTGatGfi-G~~lv~~Ll~~g--~------~V~~i 31 (393)
T d1i24a_ 1 GSRVM--VIGGDGYC-GWATALHLSKKN--Y------EVCIV 31 (393)
T ss_dssp -CEEE--EETTTSHH-HHHHHHHHHHTT--C------EEEEE
T ss_pred CCEEE--EECCCcHH-HHHHHHHHHHCc--C------EEEEE
Confidence 44553 55665433 567788888888 7 88877
No 18
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}
Probab=36.48 E-value=8.4 Score=29.36 Aligned_cols=33 Identities=12% Similarity=0.016 Sum_probs=20.2
Q ss_pred hhhhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEcC
Q psy7740 76 EFNILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVMT 119 (184)
Q Consensus 76 Gf~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~VilT 119 (184)
++||| |||+.| +-...+++.|.+.| + +|.++-.
T Consensus 8 ~KkIL--VTG~tG-fIGs~lv~~Ll~~g--~------~V~~~~r 40 (356)
T d1rkxa_ 8 GKRVF--VTGHTG-FKGGWLSLWLQTMG--A------TVKGYSL 40 (356)
T ss_dssp TCEEE--EETTTS-HHHHHHHHHHHHTT--C------EEEEEES
T ss_pred CCEEE--EECCCC-HHHHHHHHHHHHCC--C------EEEEEEC
Confidence 34553 345443 22455788888888 7 8887653
No 19
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=36.13 E-value=12 Score=24.46 Aligned_cols=31 Identities=13% Similarity=0.249 Sum_probs=21.3
Q ss_pred hhhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEc
Q psy7740 77 FNILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVM 118 (184)
Q Consensus 77 f~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~Vil 118 (184)
.||++++||++=+.-+..+ |.+.| + +|..+.
T Consensus 2 ~KIvvalSGGvDS~vl~~l---L~~~~--~------~v~a~~ 32 (168)
T d1vl2a1 2 EKVVLAYSGGLDTSVILKW---LCEKG--F------DVIAYV 32 (168)
T ss_dssp CEEEEECCSSHHHHHHHHH---HHHTT--C------EEEEEE
T ss_pred CEEEEEeccHHHHHHHHHH---HHHcC--C------eEEEEE
Confidence 4799999999777655554 55666 5 665554
No 20
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=33.86 E-value=10 Score=27.14 Aligned_cols=22 Identities=32% Similarity=0.365 Sum_probs=16.4
Q ss_pred hhhcCCCchHHhHHHHHHHHHHh
Q psy7740 79 ILLCCTGSVATIKLPELIEQIEQ 101 (184)
Q Consensus 79 illg~tGSiaa~k~~~li~~L~~ 101 (184)
.++|.||||| -.++++|+...+
T Consensus 6 ~IlGsTGSIG-~~tL~Vi~~~~d 27 (150)
T d1r0ka2 6 TVLGATGSIG-HSTLDLIERNLD 27 (150)
T ss_dssp EEETTTSHHH-HHHHHHHHHTGG
T ss_pred EEECCCcHHH-HHHHHHHHcCCC
Confidence 4789999999 457777776544
No 21
>d1ppjh_ f.28.1.1 (H:) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) {Cow (Bos taurus) [TaxId: 9913]}
Probab=33.43 E-value=16 Score=22.79 Aligned_cols=35 Identities=23% Similarity=0.544 Sum_probs=29.2
Q ss_pred CccHHHHHHHHHHHhhcCC---CChhhHHHhhhhhhcc
Q psy7740 27 GDCKAFMTKYMICIKKNNS---DSSACRDEIKDYLGCR 61 (184)
Q Consensus 27 ~~c~~~~~~y~~cl~~~~~---~~~~cr~~~k~yl~cr 61 (184)
+.|..++..|..|..+-+. ..+.|-.+--.|+.|+
T Consensus 16 ~~C~~~~~~~~eC~eRV~~~~~~~E~C~eE~fd~~hc~ 53 (66)
T d1ppjh_ 16 EKCVKARERLELCDERVSSRSQTEEDCTEELLDFLHAR 53 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSCSCCSHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 4699999999999998653 3457999999999986
No 22
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=32.60 E-value=15 Score=27.31 Aligned_cols=43 Identities=9% Similarity=0.158 Sum_probs=27.1
Q ss_pred hhhhcCCCc-hHHhHHHHHHHHHHhccccccccccceEEEEcCchH--HHhcCc
Q psy7740 78 NILLCCTGS-VATIKLPELIEQIEQLQYEFNKIMIINLNVVMTKHA--FHFVPD 128 (184)
Q Consensus 78 ~illg~tGS-iaa~k~~~li~~L~~~g~~~~~~~~~~V~VilT~sA--~~fv~~ 128 (184)
||++..+|+ .-..-+..++++|++.| + +|..+.|..+ ..++..
T Consensus 2 kili~~~GtGGHv~~a~al~~~L~~~G--~------eV~~i~~~~~~~~~~~~~ 47 (351)
T d1f0ka_ 2 RLMVMAGGTGGHVFPGLAVAHHLMAQG--W------QVRWLGTADRMEADLVPK 47 (351)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHTTT--C------EEEEEECTTSTHHHHGGG
T ss_pred EEEEEcCCcHHHHHHHHHHHHHHHhCC--C------EEEEEEeCCcchhhcccc
Confidence 566654443 22223678999999988 7 9988776432 344443
No 23
>d1utha_ c.94.1.1 (A:) LysR-type regulatory protein DntR {Burkholderia sp. [TaxId: 36773]}
Probab=32.09 E-value=11 Score=26.00 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=30.7
Q ss_pred hhhhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEc
Q psy7740 76 EFNILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVM 118 (184)
Q Consensus 76 Gf~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~Vil 118 (184)
..++-+|++.+++...++.++..+++..|+. +|++..
T Consensus 11 ~~~~rI~~~~~~~~~~lp~ll~~f~~~~P~v------~l~i~~ 47 (219)
T d1utha_ 11 TRTFNLAMTDIGEMYFMPPLMEALAQRAPHI------QISTLR 47 (219)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHHHCTTC------EEEEEC
T ss_pred CCEEEEEEcHHHHHHHHHHHHHHHHHHCCCC------EEEEEe
Confidence 3467789999999999999999999987656 677665
No 24
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=31.91 E-value=10 Score=26.08 Aligned_cols=31 Identities=6% Similarity=0.029 Sum_probs=21.0
Q ss_pred hcCCCchHHh---HHHHHHHHHHhccccccccccceEEEEcC
Q psy7740 81 LCCTGSVATI---KLPELIEQIEQLQYEFNKIMIINLNVVMT 119 (184)
Q Consensus 81 lg~tGSiaa~---k~~~li~~L~~~g~~~~~~~~~~V~VilT 119 (184)
++|+|..++= .+..++++|.+.| . .|-++--
T Consensus 4 i~I~G~~gSGKTTli~~l~~~L~~~g--~------~v~vik~ 37 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLMEKWVAAAVREG--W------RVGTVKH 37 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTT--C------CEEEEEC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCC--C------eEEEEEe
Confidence 3455554444 4778999999988 6 7777743
No 25
>d2fyia1 c.94.1.1 (A:88-307) LysR-type regulatory protein Cbl {Escherichia coli [TaxId: 562]}
Probab=31.01 E-value=11 Score=26.32 Aligned_cols=39 Identities=23% Similarity=0.332 Sum_probs=30.1
Q ss_pred hhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEcCchH
Q psy7740 78 NILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVMTKHA 122 (184)
Q Consensus 78 ~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~VilT~sA 122 (184)
++-+|++-+++.+.+|.+|..+++..|+. ++++....+.
T Consensus 7 ~l~i~~~~~~~~~~Lp~~l~~f~~~~P~i------~l~i~~~~~~ 45 (220)
T d2fyia1 7 VLTIATTHTQARYSLPEVIKAFRELFPEV------RLELIQGTPQ 45 (220)
T ss_dssp EEEEEECHHHHHHTHHHHHHHHHHHCTTE------EEEEEECCHH
T ss_pred EEEEEEEHHHHHHHHHHHHHHHHHHCCCc------EEEEEECCcH
Confidence 45678888999999999999999987655 6666655443
No 26
>d2esna2 c.94.1.1 (A:92-303) Probable LysR-type transcriptional regulator PA0477 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=27.79 E-value=14 Score=25.23 Aligned_cols=36 Identities=19% Similarity=0.264 Sum_probs=29.9
Q ss_pred hhhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEc
Q psy7740 77 FNILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVM 118 (184)
Q Consensus 77 f~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~Vil 118 (184)
.++-+|++.+++...++.++..+++..|+. +|.+..
T Consensus 8 ~~~rI~~~~~~~~~~lp~ll~~f~~~~P~v------~i~l~~ 43 (212)
T d2esna2 8 RTFVFAATDYTAFALLPPLMNRLQHSAPGV------RLRLVN 43 (212)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHHHSTTC------EEEEEC
T ss_pred cEEEEEEcHHHHHHHHHHHHHHHHHHCCCc------EEEEEe
Confidence 456679999999999999999999987766 777765
No 27
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}
Probab=27.58 E-value=20 Score=26.62 Aligned_cols=26 Identities=19% Similarity=0.097 Sum_probs=16.9
Q ss_pred CCCchHHhHHHHHHHHHHhccccccccccceEEEE
Q psy7740 83 CTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVV 117 (184)
Q Consensus 83 ~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~Vi 117 (184)
|||+.| .-.-.+++.|.+.| + +|.++
T Consensus 5 VTGatG-fIGs~lv~~Ll~~g--~------~V~~i 30 (338)
T d1orra_ 5 ITGGCG-FLGSNLASFALSQG--I------DLIVF 30 (338)
T ss_dssp EETTTS-HHHHHHHHHHHHTT--C------EEEEE
T ss_pred EECCCc-HHHHHHHHHHHHCc--C------EEEEE
Confidence 455544 23456777787787 7 88876
No 28
>d1yvca1 b.40.4.12 (A:1-69) Hypothetical protein MMP0076 {Methanococcus maripaludis [TaxId: 39152]}
Probab=27.05 E-value=16 Score=22.55 Aligned_cols=26 Identities=23% Similarity=0.377 Sum_probs=19.3
Q ss_pred cCCCCCCcccCCCCCCC------CCCCCCCcc
Q psy7740 4 MTFGQKKFIPTAPDKGS------FPLDHYGDC 29 (184)
Q Consensus 4 ~~~~~~~~~~~~p~~g~------fpldh~~~c 29 (184)
|+|++...+..|-.+|. =-|+|.|.+
T Consensus 1 ~~~~k~~~~~~pvk~g~~~~v~I~~l~~~G~G 32 (69)
T d1yvca1 1 MAFGKPAMKNVPVEAGKEYEVTIEDMGKGGDG 32 (69)
T ss_dssp CCSSSSTTSCCSSCTTCEEEEECCEECTTSCE
T ss_pred CCcccchhccCCCCCCCEEEEEEEECCCCCcE
Confidence 67888888888888885 455666654
No 29
>d1kjna_ c.115.1.1 (A:) Hypothetical protein MTH777 (MT0777) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=26.73 E-value=31 Score=24.84 Aligned_cols=29 Identities=14% Similarity=0.165 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhccccccccccceEEEEcCchHHHhcC
Q psy7740 91 KLPELIEQIEQLQYEFNKIMIINLNVVMTKHAFHFVP 127 (184)
Q Consensus 91 k~~~li~~L~~~g~~~~~~~~~~V~VilT~sA~~fv~ 127 (184)
.+..+...|++.| + +|.|.-|++|.+.+.
T Consensus 19 ~~lyl~~~Lk~kG--~------~v~Va~npAA~kLie 47 (152)
T d1kjna_ 19 LAIYTSHKLKKKG--F------RVTVTANPAALRLVQ 47 (152)
T ss_dssp HHHHHHHHHHHTT--C------EEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhcC--C------ceEEecCHHHHhHhh
Confidence 4678889999999 8 999999999998865
No 30
>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=26.33 E-value=13 Score=26.60 Aligned_cols=22 Identities=18% Similarity=0.347 Sum_probs=15.9
Q ss_pred hhhcCCCchHHhHHHHHHHHHHh
Q psy7740 79 ILLCCTGSVATIKLPELIEQIEQ 101 (184)
Q Consensus 79 illg~tGSiaa~k~~~li~~L~~ 101 (184)
.++|.|||||. .++++|+....
T Consensus 5 ~IlGsTGSIG~-~tL~Vi~~~~d 26 (151)
T d1q0qa2 5 TILGSTGSIGC-STLDVVRHNPE 26 (151)
T ss_dssp EEETTTSHHHH-HHHHHHHHCTT
T ss_pred EEEcCCcHHHH-HHHHHHHhCCC
Confidence 47899999994 57777765443
No 31
>d1p80a1 c.23.16.3 (A:598-753) Catalase, C-terminal domain {Escherichia coli, HPII [TaxId: 562]}
Probab=26.19 E-value=33 Score=23.52 Aligned_cols=38 Identities=5% Similarity=0.147 Sum_probs=29.0
Q ss_pred hhhhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEcCch
Q psy7740 76 EFNILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVMTKH 121 (184)
Q Consensus 76 Gf~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~VilT~s 121 (184)
|+||.+-+.-++-..-+...++.|++.| + +|.++-++.
T Consensus 3 grkVaiLv~dg~~~~e~~~~~~~l~~ag--~------~v~~v~~~~ 40 (156)
T d1p80a1 3 GRVVAILLNDEVRSADLLAILKALKAKG--V------HAKLLYSRM 40 (156)
T ss_dssp TCEEEEECCTTCCHHHHHHHHHHHHHHT--C------EEEEEESSS
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHCC--C------EEEEEeccc
Confidence 5677777777777778888899999988 6 888776544
No 32
>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]}
Probab=25.61 E-value=13 Score=27.36 Aligned_cols=28 Identities=18% Similarity=0.420 Sum_probs=21.5
Q ss_pred hhhhhhhcCCCchHHhHHHHHHHHHHhc
Q psy7740 75 LEFNILLCCTGSVATIKLPELIEQIEQL 102 (184)
Q Consensus 75 LGf~illg~tGSiaa~k~~~li~~L~~~ 102 (184)
-+.+|++|++|++=+.-+..++..+...
T Consensus 23 ~~~kv~Va~SGG~DS~~Ll~lL~~~~~~ 50 (216)
T d1wy5a1 23 GERRVLIAFSGGVDSVVLTDVLLKLKNY 50 (216)
T ss_dssp SCCEEEEECCSSHHHHHHHHHHHHSTTT
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHHHHHh
Confidence 3678999999998887777777666543
No 33
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=25.20 E-value=9.6 Score=27.50 Aligned_cols=24 Identities=17% Similarity=0.260 Sum_probs=18.5
Q ss_pred hhhcCCCchHHhHHHHHHHHHHhcc
Q psy7740 79 ILLCCTGSVATIKLPELIEQIEQLQ 103 (184)
Q Consensus 79 illg~tGSiaa~k~~~li~~L~~~g 103 (184)
.++|+||++|+=|.. +.+.|.+.|
T Consensus 3 ~iIgITG~igSGKSt-v~~~l~~~G 26 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTT-IANLFTDLG 26 (205)
T ss_dssp EEEEEECSTTSCHHH-HHHHHHTTT
T ss_pred EEEEEECCCCCCHHH-HHHHHHHCC
Confidence 578999999999864 456667666
No 34
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=25.09 E-value=10 Score=27.53 Aligned_cols=25 Identities=16% Similarity=0.283 Sum_probs=18.9
Q ss_pred hhhhcCCCchHHhHHHHHHHHHHhcc
Q psy7740 78 NILLCCTGSVATIKLPELIEQIEQLQ 103 (184)
Q Consensus 78 ~illg~tGSiaa~k~~~li~~L~~~g 103 (184)
+.++|+||++|+=|.- +.+.|.+.|
T Consensus 3 k~iIgitG~igSGKSt-v~~~l~~~G 27 (208)
T d1vhta_ 3 RYIVALTGGIGSGKST-VANAFADLG 27 (208)
T ss_dssp CEEEEEECCTTSCHHH-HHHHHHHTT
T ss_pred CEEEEEECCCcCCHHH-HHHHHHHCC
Confidence 4578999999999854 446677777
No 35
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]}
Probab=25.07 E-value=20 Score=23.34 Aligned_cols=26 Identities=19% Similarity=0.019 Sum_probs=22.2
Q ss_pred hhhhhcCCCchHHhHHHHHHHHHHhc
Q psy7740 77 FNILLCCTGSVATIKLPELIEQIEQL 102 (184)
Q Consensus 77 f~illg~tGSiaa~k~~~li~~L~~~ 102 (184)
+||++++.||-.+.++.++...+.+.
T Consensus 3 k~ILv~vD~s~~s~~al~~A~~~a~~ 28 (140)
T d1jmva_ 3 KHILVAVDLSEESPILLKKAVGIAKR 28 (140)
T ss_dssp SEEEEEECCSTTHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHHHHHHH
Confidence 48999999999999988888777765
No 36
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=23.58 E-value=23 Score=26.45 Aligned_cols=28 Identities=14% Similarity=0.106 Sum_probs=18.5
Q ss_pred CCCchHHhHHHHHHHHHHhccccccccccceEEEEcC
Q psy7740 83 CTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVMT 119 (184)
Q Consensus 83 ~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~VilT 119 (184)
|||+.| +-.-.|++.|.+.| + +|..+..
T Consensus 6 VTGatG-fiG~~lv~~Ll~~g--~------~V~~~~r 33 (339)
T d1n7ha_ 6 ITGITG-QDGSYLTEFLLGKG--Y------EVHGLIR 33 (339)
T ss_dssp EETTTS-HHHHHHHHHHHHTT--C------EEEEEEC
T ss_pred EeCCcc-HHHHHHHHHHHHCc--C------EEEEEEC
Confidence 455544 33456778888888 7 8887764
No 37
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=23.53 E-value=9.4 Score=26.80 Aligned_cols=25 Identities=16% Similarity=0.246 Sum_probs=18.9
Q ss_pred hhhhcCCCchHHhHHHHHHHHHHhcc
Q psy7740 78 NILLCCTGSVATIKLPELIEQIEQLQ 103 (184)
Q Consensus 78 ~illg~tGSiaa~k~~~li~~L~~~g 103 (184)
.+++|+||++|+=|. .+.+.|.+.|
T Consensus 3 p~IIgitG~~gSGKs-tva~~l~~~g 27 (191)
T d1uf9a_ 3 PIIIGITGNIGSGKS-TVAALLRSWG 27 (191)
T ss_dssp CEEEEEEECTTSCHH-HHHHHHHHTT
T ss_pred CEEEEEECCCCCCHH-HHHHHHHHCC
Confidence 467899999999983 3566677766
No 38
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=23.01 E-value=14 Score=25.17 Aligned_cols=27 Identities=15% Similarity=0.119 Sum_probs=18.9
Q ss_pred hhhhhcCCCchHHhH---HHHHHHHHHhcc
Q psy7740 77 FNILLCCTGSVATIK---LPELIEQIEQLQ 103 (184)
Q Consensus 77 f~illg~tGSiaa~k---~~~li~~L~~~g 103 (184)
.++++||+|.+|+=| +-.|...|...+
T Consensus 21 ~~~iIgI~G~~GSGKSTla~~L~~~l~~~~ 50 (198)
T d1rz3a_ 21 GRLVLGIDGLSRSGKTTLANQLSQTLREQG 50 (198)
T ss_dssp SSEEEEEEECTTSSHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHhcccc
Confidence 367899999999887 334555555554
No 39
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.93 E-value=23 Score=26.79 Aligned_cols=28 Identities=18% Similarity=0.291 Sum_probs=19.1
Q ss_pred hhhh-cCCCchHHhHHHHHHHHHHhccccccccccceEEEE
Q psy7740 78 NILL-CCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVV 117 (184)
Q Consensus 78 ~ill-g~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~Vi 117 (184)
++|+ |.||-+|. .+++.|.+.| + +|.++
T Consensus 18 ~iLVTG~tGfIGs----~lv~~L~~~g--~------~V~~~ 46 (341)
T d1sb8a_ 18 VWLITGVAGFIGS----NLLETLLKLD--Q------KVVGL 46 (341)
T ss_dssp EEEEETTTSHHHH----HHHHHHHHTT--C------EEEEE
T ss_pred EEEEecCCCHHHH----HHHHHHHHCc--C------EEEEE
Confidence 4553 66666664 5777888888 6 88776
No 40
>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=22.64 E-value=24 Score=24.45 Aligned_cols=35 Identities=14% Similarity=0.277 Sum_probs=20.2
Q ss_pred hhhh-hhcCCCchHHhHHHHHHHHHHhcc-ccccccccceEEEEcCc
Q psy7740 76 EFNI-LLCCTGSVATIKLPELIEQIEQLQ-YEFNKIMIINLNVVMTK 120 (184)
Q Consensus 76 Gf~i-llg~tGSiaa~k~~~li~~L~~~g-~~~~~~~~~~V~VilT~ 120 (184)
|+|+ ++|.||=+ ..++|+.|.+.. +.. ++..+.|+
T Consensus 1 g~kVaIvGATGyv----G~eLirlL~~H~fp~~------~l~~~~s~ 37 (154)
T d2gz1a1 1 GYTVAVVGATGAV----GAQMIKMLEESTLPID------KIRYLASA 37 (154)
T ss_dssp CEEEEEETTTSHH----HHHHHHHHHTCCSCEE------EEEEEECG
T ss_pred CCEEEEECCCcHH----HHHHHHHHHcCCCCce------EEEEeccc
Confidence 3444 44555544 478888887763 112 66666654
No 41
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]}
Probab=22.07 E-value=16 Score=23.61 Aligned_cols=29 Identities=7% Similarity=-0.102 Sum_probs=24.6
Q ss_pred hhhhhhhhcCCCchHHhHHHHHHHHHHhc
Q psy7740 74 KLEFNILLCCTGSVATIKLPELIEQIEQL 102 (184)
Q Consensus 74 ~LGf~illg~tGSiaa~k~~~li~~L~~~ 102 (184)
+..++||+++-||-.+-++.++...+.+.
T Consensus 2 ~~mk~ILv~~D~S~~s~~al~~A~~~a~~ 30 (138)
T d1q77a_ 2 NAMKVLLVLTDAYSDCEKAITYAVNFSEK 30 (138)
T ss_dssp CCCEEEEEEESTTCCCHHHHHHHHHHHTT
T ss_pred CCCCEEEEEEeCCHHHHHHHHHHHHhhhh
Confidence 34578999999999999999988888775
No 42
>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}
Probab=21.97 E-value=28 Score=25.10 Aligned_cols=29 Identities=14% Similarity=0.253 Sum_probs=20.0
Q ss_pred hcCCCchHHhHHHHHHHHHHhccccccccccceEEEE
Q psy7740 81 LCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVV 117 (184)
Q Consensus 81 lg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~Vi 117 (184)
+-|||+.| .-.-.+++.|.+.|+ . +|.++
T Consensus 2 ILITGgsG-fIGs~lv~~L~~~g~-~------~V~~~ 30 (307)
T d1eq2a_ 2 IIVTGGAG-FIGSNIVKALNDKGI-T------DILVV 30 (307)
T ss_dssp EEEETTTS-HHHHHHHHHHHTTTC-C------CEEEE
T ss_pred EEEecCcc-HHHHHHHHHHHhCCC-C------eEEEE
Confidence 44677755 556778899998872 2 67765
No 43
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]}
Probab=21.63 E-value=30 Score=22.25 Aligned_cols=26 Identities=23% Similarity=0.241 Sum_probs=21.7
Q ss_pred hhhhhcCCCchHHhHHHHHHHHHHhc
Q psy7740 77 FNILLCCTGSVATIKLPELIEQIEQL 102 (184)
Q Consensus 77 f~illg~tGSiaa~k~~~li~~L~~~ 102 (184)
+||++++-||-.+.++.++...+.+.
T Consensus 2 k~Ilv~~D~s~~s~~a~~~a~~~a~~ 27 (135)
T d2z3va1 2 KTILLAYDGSEHARRAAEVAKAEAEA 27 (135)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHH
Confidence 47899999999999999988777653
No 44
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}
Probab=21.30 E-value=22 Score=25.86 Aligned_cols=28 Identities=14% Similarity=0.277 Sum_probs=19.0
Q ss_pred hhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEc
Q psy7740 79 ILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVM 118 (184)
Q Consensus 79 illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~Vil 118 (184)
++.|.||-+|. .+++.|.+.| + +|.++.
T Consensus 7 LVtGatG~iG~----~l~~~L~~~G--~------~V~~~~ 34 (312)
T d1qyda_ 7 LIVGGTGYIGK----RIVNASISLG--H------PTYVLF 34 (312)
T ss_dssp EEESTTSTTHH----HHHHHHHHTT--C------CEEEEC
T ss_pred EEECCCCHHHH----HHHHHHHhCC--C------EEEEEE
Confidence 45566666664 5667777788 7 888775
No 45
>d1al3a_ c.94.1.1 (A:) Cofactor-binding fragment of LysR-type protein CysB {Klebsiella aerogenes [TaxId: 28451]}
Probab=20.97 E-value=20 Score=25.67 Aligned_cols=38 Identities=16% Similarity=0.183 Sum_probs=28.6
Q ss_pred hhhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEcCch
Q psy7740 78 NILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVMTKH 121 (184)
Q Consensus 78 ~illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~VilT~s 121 (184)
.+-+|++.+.+.+.+|.+|..+.+..|+. +|.++...+
T Consensus 7 ~LrIg~~~~~~~~~LP~~l~~f~~~~P~v------~v~l~~~~~ 44 (237)
T d1al3a_ 7 SLYVATTHTQARYALPGVIKGFIERYPRV------SLHMHQGSP 44 (237)
T ss_dssp EEEEEECHHHHHHTSHHHHHHHHHHCTEE------EEEEEECCH
T ss_pred EEEEEeEHHHHHHHHHHHHHHHHHHCCCc------EEEEEECCH
Confidence 35578899999999999999999986545 566554333
No 46
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}
Probab=20.50 E-value=27 Score=26.45 Aligned_cols=26 Identities=15% Similarity=0.075 Sum_probs=17.4
Q ss_pred CCCchHHhHHHHHHHHHHhccccccccccceEEEE
Q psy7740 83 CTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVV 117 (184)
Q Consensus 83 ~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~Vi 117 (184)
|||+.| .-.-.+++.|.+.| + +|.++
T Consensus 5 ItG~tG-fIG~~l~~~L~~~g--~------~V~~~ 30 (338)
T d1udca_ 5 VTGGSG-YIGSHTCVQLLQNG--H------DVIIL 30 (338)
T ss_dssp EETTTS-HHHHHHHHHHHHTT--C------EEEEE
T ss_pred EECCCC-HHHHHHHHHHHHCc--C------EEEEE
Confidence 455544 23456778888888 6 88887
No 47
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.45 E-value=36 Score=23.87 Aligned_cols=29 Identities=17% Similarity=0.321 Sum_probs=18.9
Q ss_pred hhhcCCCchHHhHHHHHHHHHHhccccccccccceEEEEcC
Q psy7740 79 ILLCCTGSVATIKLPELIEQIEQLQYEFNKIMIINLNVVMT 119 (184)
Q Consensus 79 illg~tGSiaa~k~~~li~~L~~~g~~~~~~~~~~V~VilT 119 (184)
+++|.||.+|. .++++|.+.| + +|.++.-
T Consensus 7 lV~GatG~iG~----~v~~~Ll~~g--~------~V~~~~R 35 (205)
T d1hdoa_ 7 AIFGATGQTGL----TTLAQAVQAG--Y------EVTVLVR 35 (205)
T ss_dssp EEESTTSHHHH----HHHHHHHHTT--C------EEEEEES
T ss_pred EEECCCCHHHH----HHHHHHHHCc--C------EEEEEEc
Confidence 45566666664 4666667777 7 8877753
No 48
>d1dtdb_ g.30.1.1 (B:) Carboxypeptidase inhibitor {Medicinal leech (Hirudo medicinalis) [TaxId: 6421]}
Probab=20.01 E-value=10 Score=22.79 Aligned_cols=13 Identities=38% Similarity=0.966 Sum_probs=11.5
Q ss_pred CCCCCCCCCCccH
Q psy7740 18 KGSFPLDHYGDCK 30 (184)
Q Consensus 18 ~g~fpldh~~~c~ 30 (184)
||.-||-.+|||.
T Consensus 18 rgaaplpsegecn 30 (61)
T d1dtdb_ 18 RGAAPLPSEGECN 30 (61)
T ss_dssp ESCCCCGGGCEEE
T ss_pred cCCCCCCCCCccC
Confidence 7889999999994
Done!