BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7748
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P3D0|NUD16_MOUSE U8 snoRNA-decapping enzyme OS=Mus musculus GN=Nudt16 PE=2 SV=1
Length = 195
Score = 147 bits (370), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 103/163 (63%), Gaps = 2/163 (1%)
Query: 52 HASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLE-ALNRELNEE 110
HA H +++A + K+F R VLMQMRFDG +GFPGG VDA +S LE LNREL EE
Sbjct: 21 HACHALLYAPDPRKLFGRIPMRFAVLMQMRFDGRLGFPGGFVDAQDSCLEDGLNRELREE 80
Query: 111 I-NLNPKYKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGT 169
+ ++V+ SD H + +++ HFYA ++ + +E A + D+G+EVLG
Sbjct: 81 LGEAMSAFRVERSDYRSSHIAARPRVVAHFYAKRLTLEQLQAVEARAPQAKDHGLEVLGL 140
Query: 170 VRVPLYTMGDGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSP 212
VRVPLY + DG GLP FL +SFIG A+ QLL AL LK+L P
Sbjct: 141 VRVPLYVLRDGEGGLPAFLENSFIGAAREQLLEALQDLKLLDP 183
>sp|Q96DE0|NUD16_HUMAN U8 snoRNA-decapping enzyme OS=Homo sapiens GN=NUDT16 PE=1 SV=2
Length = 195
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 107/171 (62%), Gaps = 3/171 (1%)
Query: 49 SGY-HASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLE-ALNRE 106
SG+ HA H +++A + +F R +LMQMRFDG +GFPGG VD + LE LNRE
Sbjct: 17 SGWRHACHALLYAPDPGMLFGRIPLRYAILMQMRFDGRLGFPGGFVDTQDRSLEDGLNRE 76
Query: 107 LNEEIN-LNPKYKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVE 165
L EE+ ++V+ +D H +++ HFYA ++ ++L +E GA + D+G+E
Sbjct: 77 LREELGEAAAAFRVERTDYRSSHVGSGPRVVAHFYAKRLTLEELLAVEAGATRAKDHGLE 136
Query: 166 VLGTVRVPLYTMGDGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSPEEIN 216
VLG VRVPLYT+ DG GLP FL +SFIG+A+ QLL AL L +L I+
Sbjct: 137 VLGLVRVPLYTLRDGVGGLPTFLENSFIGSAREQLLEALQDLGLLQSGSIS 187
>sp|A1A4Q9|NUD16_BOVIN U8 snoRNA-decapping enzyme OS=Bos taurus GN=NUDT16 PE=2 SV=1
Length = 195
Score = 140 bits (353), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
Query: 52 HASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLE-ALNRELNEE 110
HA H +++A + +F R VLMQMRFDG +GFPGG VD + LE LNREL EE
Sbjct: 21 HACHALLYAPDPGLLFGRIPLRYAVLMQMRFDGRLGFPGGFVDLRDGSLEDGLNRELGEE 80
Query: 111 IN-LNPKYKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGT 169
+ ++V+ +D H +++ HFY + + +E GA + D+G+EVLG
Sbjct: 81 LGEAAGAFRVERADYRSSHAGSRPRVVAHFYTKLLTLEQLTAVEMGAPRARDHGLEVLGL 140
Query: 170 VRVPLYTMGDGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSP 212
VRVPLYT+ DG GLP FL ++FIGNA+ QLL A+ L +L P
Sbjct: 141 VRVPLYTLRDGVGGLPAFLENTFIGNAREQLLEAVQNLGLLEP 183
>sp|Q2V8X7|NUD16_SHEEP U8 snoRNA-decapping enzyme OS=Ovis aries GN=NUDT16 PE=2 SV=1
Length = 195
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 98/163 (60%), Gaps = 2/163 (1%)
Query: 52 HASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLE-ALNRELNEE 110
HA H M++A + +F R VLMQMRFDG +GFPGG VD + LE LNREL EE
Sbjct: 21 HACHAMLYAPDPGLLFGRIPLRYAVLMQMRFDGRLGFPGGFVDLRDGSLEDGLNRELGEE 80
Query: 111 IN-LNPKYKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGT 169
+ ++V+ +D H +++ HFY + + +E GA + D+G+EVLG
Sbjct: 81 LGEAAAAFRVERADYRSSHAGSRPRVVAHFYTKLLTLEQLTAVEMGAPRARDHGLEVLGL 140
Query: 170 VRVPLYTMGDGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSP 212
VRVPLYT+ D GLP FL ++FIGNA+ QLL A+ L +L P
Sbjct: 141 VRVPLYTLRDRVGGLPAFLENTFIGNAREQLLEAVQNLGLLEP 183
>sp|Q9IAY5|SDOS_CHICK Protein syndesmos OS=Gallus gallus GN=SDOS PE=1 SV=3
Length = 314
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 104/178 (58%), Gaps = 5/178 (2%)
Query: 52 HASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLE-ALNRELNEE 110
H+ H M++A N +F R VLMQMRFDG +GFPGG VD LE LNR L
Sbjct: 48 HSCHAMLYAPNPGMLFGRIPLRYAVLMQMRFDGLLGFPGGFVDRRYWSLEDGLNRVLGLG 107
Query: 111 INLNPKYKVKDSDLVCIHYSQSK-KIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGT 169
+ ++ ++D +C H + +++ H YA Q+ ++ IE A+ S D+G+EV+G
Sbjct: 108 LGC---VRLTEADYLCSHLTDGPHRVVAHLYARQLTLEELHTIEISAVHSRDHGLEVMGM 164
Query: 170 VRVPLYTMGDGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSPEEINQALNAKPVPVK 227
VRVPLYT D GLP FL +SF+G AK QLL AL L ++ E++ +A+ A P K
Sbjct: 165 VRVPLYTQKDRMGGLPNFLANSFVGTAKFQLLFALKILNMVPEEKLAEAVAATQKPKK 222
>sp|Q6TEC1|NUD16_XENLA U8 snoRNA-decapping enzyme OS=Xenopus laevis GN=nudt16 PE=1 SV=1
Length = 212
Score = 121 bits (303), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 106/179 (59%), Gaps = 8/179 (4%)
Query: 49 SGY-HASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLE-ALNRE 106
GY HA H ++ A + K+F R +LM MRFDG +GFPGG VD + LE L RE
Sbjct: 30 EGYKHACHALLHAPSQAKLFDRVPIRRVLLMMMRFDGRLGFPGGFVDTRDISLEEGLKRE 89
Query: 107 LNEEINLNPKY---KVKDSDLVCIHYSQ-SKKIILHFYALQVEKTDVLEIEKGALTSHDY 162
L EE L P +V + D + +K + HFY +++ ++ IE A+ + D+
Sbjct: 90 LEEE--LGPALATVEVTEDDYRSSQVREHPQKCVTHFYIKELKLEEIERIEAEAVNAKDH 147
Query: 163 GVEVLGTVRVPLYTMGDGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSPEEINQALNA 221
G+EV+G +RVPLYT+ D GLP FL ++FIGN+K QLL AL LK+L ++I + L A
Sbjct: 148 GLEVMGLIRVPLYTLRDRVGGLPAFLCNNFIGNSKSQLLYALRSLKLLREDQIQEVLKA 206
>sp|Q9BRJ7|SDOS_HUMAN Protein syndesmos OS=Homo sapiens GN=NUDT16L1 PE=1 SV=1
Length = 211
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 102/172 (59%), Gaps = 5/172 (2%)
Query: 52 HASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLE-ALNRELNEE 110
H+ H M++A N ++F R +VLMQMRFDG +GFPGG VD LE LNR L
Sbjct: 26 HSCHAMLYAANPGQLFGRIPMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLG 85
Query: 111 INLNPKYKVKDSDLVCIHYSQS-KKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGT 169
+ ++ ++D + H ++ +++ H YA Q+ + +E A+ S D+G+EVLG
Sbjct: 86 LG---CLRLTEADYLSSHLTEGPHRVVAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGL 142
Query: 170 VRVPLYTMGDGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSPEEINQALNA 221
VRVPLYT D G P FL+++F+ AK QLL AL L ++ E++ +AL A
Sbjct: 143 VRVPLYTQKDRVGGFPNFLSNAFVSTAKCQLLFALKVLNMMPEEKLVEALAA 194
>sp|Q8VHN8|SDOS_MOUSE Protein syndesmos OS=Mus musculus GN=Nudt16l1 PE=1 SV=2
Length = 211
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 3/169 (1%)
Query: 52 HASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEI 111
H+ H M++A N ++F R +VLMQMRFDG +GFPGG VD LE +
Sbjct: 26 HSCHAMLYAANPGQLFGRIPMRFSVLMQMRFDGLLGFPGGFVDRRFWSLE--DGLNRVLG 83
Query: 112 NLNPKYKVKDSDLVCIHYSQSK-KIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTV 170
++ ++D + H ++ +++ H YA Q+ + +E A+ S D+G+EVLG V
Sbjct: 84 LGLGGLRLTEADYLSSHLTEGPHRVVAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLV 143
Query: 171 RVPLYTMGDGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSPEEINQAL 219
RVPLYT D G P FL+++F+ AK+QLL AL L ++ E++ +AL
Sbjct: 144 RVPLYTQKDRVGGFPNFLSNAFVSTAKYQLLFALKVLNMMPSEKLAEAL 192
>sp|B2SFE8|RPPH_FRATM RNA pyrophosphohydrolase OS=Francisella tularensis subsp.
mediasiatica (strain FSC147) GN=rppH PE=3 SV=1
Length = 155
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
KSGY A+ ++ +++F Q R FP G VD GE+PL+A+ REL
Sbjct: 4 KSGYRANVAIVLLNKQNRVFWG---------QRRNRTSWQFPQGGVDTGETPLQAMYREL 54
Query: 108 NEEINLNPK 116
+EEI L P+
Sbjct: 55 HEEIGLRPQ 63
>sp|C5CXX0|RPPH_VARPS RNA pyrophosphohydrolase OS=Variovorax paradoxus (strain S110)
GN=rppH PE=3 SV=1
Length = 223
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 24/101 (23%)
Query: 88 FPGGLVDAGESPLEALNRELNEEINLNP-------------KYKVKDSDL---VCIHYSQ 131
FP G +D GESP +A+ REL+EE+ L+P +Y+V D + HY
Sbjct: 35 FPQGGIDRGESPEQAMFRELHEEVGLHPEHVRIVARTRDWLRYEVPDRFIRRDARGHYKG 94
Query: 132 SKKI------ILHFYALQVEKTDVLEIEKGALTSHDYGVEV 166
K+I I H + L + TD E + A HDY V +
Sbjct: 95 QKQIWYLLQLIGHDWDLNLRATDHPEFD--AWRWHDYWVPL 133
>sp|A4IWB3|RPPH_FRATW RNA pyrophosphohydrolase OS=Francisella tularensis subsp.
tularensis (strain WY96-3418) GN=rppH PE=3 SV=1
Length = 155
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
KSGY A+ ++ +++F Q R FP G V GE+PL+A+ REL
Sbjct: 4 KSGYRANVAIVLLNKQNRVFWG---------QRRNRTSWQFPQGGVATGETPLQAMYREL 54
Query: 108 NEEINLNPK 116
+EEI L P+
Sbjct: 55 HEEIGLRPQ 63
>sp|Q5NIB6|RPPH_FRATT RNA pyrophosphohydrolase OS=Francisella tularensis subsp.
tularensis (strain SCHU S4 / Schu 4) GN=rppH PE=3 SV=1
Length = 155
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
KSGY A+ ++ +++F Q R FP G V GE+PL+A+ REL
Sbjct: 4 KSGYRANVAIVLLNKQNRVFWG---------QRRNRTSWQFPQGGVATGETPLQAMYREL 54
Query: 108 NEEINLNPK 116
+EEI L P+
Sbjct: 55 HEEIGLRPQ 63
>sp|Q0BKE0|RPPH_FRATO RNA pyrophosphohydrolase OS=Francisella tularensis subsp.
holarctica (strain OSU18) GN=rppH PE=3 SV=1
Length = 155
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
KSGY A+ ++ +++F Q R FP G V GE+PL+A+ REL
Sbjct: 4 KSGYRANVAIVLLNKQNRVFWG---------QRRNRTSWQFPQGGVATGETPLQAMYREL 54
Query: 108 NEEINLNPK 116
+EEI L P+
Sbjct: 55 HEEIGLRPQ 63
>sp|Q2A1P2|RPPH_FRATH RNA pyrophosphohydrolase OS=Francisella tularensis subsp.
holarctica (strain LVS) GN=rppH PE=3 SV=1
Length = 155
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
KSGY A+ ++ +++F Q R FP G V GE+PL+A+ REL
Sbjct: 4 KSGYRANVAIVLLNKQNRVFWG---------QRRNRTSWQFPQGGVATGETPLQAMYREL 54
Query: 108 NEEINLNPK 116
+EEI L P+
Sbjct: 55 HEEIGLRPQ 63
>sp|A7NEA4|RPPH_FRATF RNA pyrophosphohydrolase OS=Francisella tularensis subsp.
holarctica (strain FTNF002-00 / FTA) GN=rppH PE=3 SV=1
Length = 155
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
KSGY A+ ++ +++F Q R FP G V GE+PL+A+ REL
Sbjct: 4 KSGYRANVAIVLLNKQNRVFWG---------QRRNRTSWQFPQGGVATGETPLQAMYREL 54
Query: 108 NEEINLNPK 116
+EEI L P+
Sbjct: 55 HEEIGLRPQ 63
>sp|Q14JR9|RPPH_FRAT1 RNA pyrophosphohydrolase OS=Francisella tularensis subsp.
tularensis (strain FSC 198) GN=rppH PE=3 SV=1
Length = 155
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
KSGY A+ ++ +++F Q R FP G V GE+PL+A+ REL
Sbjct: 4 KSGYRANVAIVLLNKQNRVFWG---------QRRNRTSWQFPQGGVATGETPLQAMYREL 54
Query: 108 NEEINLNPK 116
+EEI L P+
Sbjct: 55 HEEIGLRPQ 63
>sp|B0TX27|RPPH_FRAP2 RNA pyrophosphohydrolase OS=Francisella philomiragia subsp.
philomiragia (strain ATCC 25017) GN=rppH PE=3 SV=1
Length = 155
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 32/139 (23%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
KSGY A+ ++ D++F Q + FP G V GE+PL+A+ REL
Sbjct: 4 KSGYRANVAIVLLNRQDRVFWG---------QRKSRTSWQFPQGGVATGETPLQAMYREL 54
Query: 108 NEEINLNP-------------KYKVKDS-----DLVCIHYSQSKKIILHFYA----LQVE 145
EE+ L P KY + DS + VCI Q K +L + +E
Sbjct: 55 YEEVGLRPHDVEVIASTRDWFKYDIPDSLVRSREPVCIGQKQ-KWFLLRLKTSESNINLE 113
Query: 146 KTDVLEIEKGALTSHDYGV 164
D E + S+ Y +
Sbjct: 114 ANDSPEFDNWRWVSYWYPI 132
>sp|A8FSC0|RPPH_SHESH RNA pyrophosphohydrolase OS=Shewanella sediminis (strain HAW-EB3)
GN=rppH PE=3 SV=1
Length = 172
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 74 ANVLMQMRFDGY-IGFPGGLVDAGESPLEALNRELNEEINLNPKY-KVKDSDLVCIHYSQ 131
V+ RF + FP G VD GE+P EA+ REL EE+ L P++ ++ S + Y
Sbjct: 20 GQVMWARRFGQHSWQFPQGGVDEGETPEEAMFRELYEEVGLRPEHVQILTSTRSWLRYRL 79
Query: 132 SKKII 136
K++I
Sbjct: 80 PKRLI 84
>sp|Q82UZ9|RPPH_NITEU RNA pyrophosphohydrolase OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=rppH PE=3 SV=1
Length = 187
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
++GY A+ +I + +++F AR + FP G + +GE+P EA+ REL
Sbjct: 4 RNGYRANVGIILLNSQNQVFWGKRARQDSWQ---------FPQGGIKSGETPTEAMYREL 54
Query: 108 NEEINLNP 115
EE L P
Sbjct: 55 AEETGLQP 62
>sp|C1DK22|RPPH_AZOVD RNA pyrophosphohydrolase OS=Azotobacter vinelandii (strain DJ /
ATCC BAA-1303) GN=rppH PE=3 SV=1
Length = 159
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 88 FPGGLVDAGESPLEALNRELNEEINLNPK 116
FP G +DA ESP EAL RELNEE+ L P+
Sbjct: 35 FPQGGIDARESPEEALFRELNEEVGLEPQ 63
>sp|A1WVE9|RPPH_HALHL RNA pyrophosphohydrolase OS=Halorhodospira halophila (strain DSM
244 / SL1) GN=rppH PE=3 SV=1
Length = 181
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 50 GYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNE 109
G+ + +I A +D ++ A + FP G V+A E+PLEAL REL E
Sbjct: 6 GFRPNVGIIVANDDGRVLWARRAGEDAWQ---------FPQGGVEANETPLEALYRELRE 56
Query: 110 EINLNP 115
E+ L P
Sbjct: 57 EVGLGP 62
>sp|Q0AGN1|RPPH_NITEC RNA pyrophosphohydrolase OS=Nitrosomonas eutropha (strain C91)
GN=rppH PE=3 SV=1
Length = 187
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
++GY A+ +I + ++F AR N FP G + +GE+P +A+ REL
Sbjct: 4 RNGYRANVGIILLNSKSQVFWGKRARQNSWQ---------FPQGGIKSGETPTQAMYREL 54
Query: 108 NEEINLNP 115
EE L P
Sbjct: 55 AEETGLQP 62
>sp|B5Z8M3|RPPH_HELPG RNA pyrophosphohydrolase OS=Helicobacter pylori (strain G27)
GN=rppH PE=3 SV=1
Length = 155
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 70 YTARANVLMQMRFD--GYIGFPGGLVDAGESPLEALNRELNEEINLN 114
Y V + R D G FP G +D GE+PLEAL+REL EEI N
Sbjct: 19 YPNTCEVFIAERIDIEGAWQFPQGGIDEGETPLEALHRELLEEIGTN 65
>sp|Q1CS35|RPPH_HELPH RNA pyrophosphohydrolase OS=Helicobacter pylori (strain HPAG1)
GN=rppH PE=3 SV=1
Length = 155
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 70 YTARANVLMQMRFD--GYIGFPGGLVDAGESPLEALNRELNEEINLN 114
Y V + R D G FP G +D GE+PLEAL+REL EEI N
Sbjct: 19 YPNTCEVFIAERIDIEGAWQFPQGGIDEGETPLEALHRELLEEIGTN 65
>sp|O25826|RPPH_HELPY RNA pyrophosphohydrolase OS=Helicobacter pylori (strain ATCC 700392
/ 26695) GN=rppH PE=3 SV=1
Length = 155
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 70 YTARANVLMQMRFD--GYIGFPGGLVDAGESPLEALNRELNEEINLN 114
Y V + R D G FP G +D GE+PLEAL+REL EEI N
Sbjct: 19 YPNACEVFIAERIDIEGAWQFPQGGIDEGETPLEALHRELLEEIGTN 65
>sp|P44932|MUTT_HAEIN 8-oxo-dGTP diphosphatase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=mutT PE=3 SV=1
Length = 136
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 88 FPGGLVDAGESPLEALNRELNEEINL 113
FPGG VDAGE+P +AL REL EEI +
Sbjct: 37 FPGGKVDAGETPEQALKRELEEEIGI 62
>sp|B2UUZ0|RPPH_HELPS RNA pyrophosphohydrolase OS=Helicobacter pylori (strain Shi470)
GN=rppH PE=3 SV=1
Length = 157
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 70 YTARANVLMQMRFD--GYIGFPGGLVDAGESPLEALNRELNEEINLN 114
Y + + R D G FP G +D GE+PLEAL+REL EEI N
Sbjct: 19 YPNTCEIFIAERIDIEGAWQFPQGGIDEGETPLEALHRELLEEIGTN 65
>sp|B0U4E6|RPPH_XYLFM RNA pyrophosphohydrolase OS=Xylella fastidiosa (strain M12) GN=rppH
PE=3 SV=1
Length = 190
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 50 GYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNE 109
GY + ++ D ++F ++R DG+ FP G + + E+P+EA+ RELNE
Sbjct: 6 GYRPNVGIVLMRRDGQVFWG--------RRVRRDGW-QFPQGGMHSDETPVEAMYRELNE 56
Query: 110 EINLNPKY 117
EI L P++
Sbjct: 57 EIGLLPEH 64
>sp|B1KI42|RPPH_SHEWM RNA pyrophosphohydrolase OS=Shewanella woodyi (strain ATCC 51908 /
MS32) GN=rppH PE=3 SV=1
Length = 173
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 74 ANVLMQMRFDGY-IGFPGGLVDAGESPLEALNRELNEEINLNPKY-KVKDSDLVCIHYSQ 131
V+ RF + +P G VD GE+P EA+ REL EE+ L P++ ++ S + Y
Sbjct: 20 GQVMWARRFGQHSWQYPQGGVDDGETPEEAMYRELYEEVGLRPEHVQILTSTRSWLRYRL 79
Query: 132 SKKII 136
K++I
Sbjct: 80 PKRLI 84
>sp|Q493D9|RPPH_BLOPB RNA pyrophosphohydrolase OS=Blochmannia pennsylvanicus (strain
BPEN) GN=rppH PE=3 SV=1
Length = 158
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 88 FPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKII 136
FP G ++ GE+P +A+ REL EEI LN + ++ S +HY KK+I
Sbjct: 36 FPQGGINIGETPEQAMYRELFEEIGLNYQDVRILSSTQYWMHYKLPKKLI 85
>sp|Q9ZJZ8|RPPH_HELPJ RNA pyrophosphohydrolase OS=Helicobacter pylori (strain J99)
GN=rppH PE=3 SV=1
Length = 157
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 70 YTARANVLMQMRFD--GYIGFPGGLVDAGESPLEALNRELNEEINLN 114
Y V + R D G FP G +D GE+PLEAL REL EEI N
Sbjct: 19 YPNTCEVFIAERIDIEGAWQFPQGGIDEGETPLEALYRELLEEIGTN 65
>sp|Q4FQ54|RPPH_PSYA2 RNA pyrophosphohydrolase OS=Psychrobacter arcticus (strain DSM
17307 / 273-4) GN=rppH PE=3 SV=1
Length = 173
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 9/56 (16%)
Query: 88 FPGGLVDAGESPLEALNRELNEEINLNPKYKVKDSDLVCI-----HYSQSKKIILH 138
FP G +D GE+P++A+ REL EE+ L+P++ DL+ + Y K+ + H
Sbjct: 35 FPQGGIDRGETPMDAMYRELWEEVGLHPRH----VDLLAVTQDWLRYRLPKRYVRH 86
>sp|Q7VTZ7|RPPH_BORPE RNA pyrophosphohydrolase OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=rppH PE=3 SV=1
Length = 190
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
+ GY + +I +++F R + FP G + GESP++A+ REL
Sbjct: 4 REGYRPNVGIILVNGKNEVFWGKRIREHAWQ---------FPQGGIKYGESPVQAMYREL 54
Query: 108 NEEINLNPKY 117
+EE+ L P++
Sbjct: 55 HEEVGLKPEH 64
>sp|Q7WFP0|RPPH_BORBR RNA pyrophosphohydrolase OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=rppH PE=3 SV=1
Length = 190
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
+ GY + +I +++F R + FP G + GESP++A+ REL
Sbjct: 4 REGYRPNVGIILVNGKNEVFWGKRIREHAWQ---------FPQGGIKYGESPVQAMYREL 54
Query: 108 NEEINLNPKY 117
+EE+ L P++
Sbjct: 55 HEEVGLKPEH 64
>sp|B6JN68|RPPH_HELP2 RNA pyrophosphohydrolase OS=Helicobacter pylori (strain P12)
GN=rppH PE=3 SV=1
Length = 155
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 69 TYTARANVLMQMRFD--GYIGFPGGLVDAGESPLEALNRELNEEINLN 114
Y V + R D G FP G +D GE+PLEAL REL EEI N
Sbjct: 18 NYPNACEVFIAERIDIEGAWQFPQGGIDEGETPLEALYRELLEEIGTN 65
>sp|Q1Q8B6|RPPH_PSYCK RNA pyrophosphohydrolase OS=Psychrobacter cryohalolentis (strain
K5) GN=rppH PE=3 SV=1
Length = 173
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 9/56 (16%)
Query: 88 FPGGLVDAGESPLEALNRELNEEINLNPKYKVKDSDLVCI-----HYSQSKKIILH 138
FP G +D GE+P++A+ REL EE+ L+P++ DL+ + Y K+ + H
Sbjct: 35 FPQGGIDRGETPMDAMYRELWEEVGLHPRH----VDLLAVTQDWLRYRLPKRYVRH 86
>sp|Q7W482|RPPH_BORPA RNA pyrophosphohydrolase OS=Bordetella parapertussis (strain 12822
/ ATCC BAA-587 / NCTC 13253) GN=rppH PE=3 SV=1
Length = 190
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNREL 107
+ GY + +I +++F R + FP G + GESP++A+ REL
Sbjct: 4 REGYRPNVGIILVNGKNEVFWGKRIREHAWQ---------FPQGGIKYGESPVQAMYREL 54
Query: 108 NEEINLNPKY 117
+EE+ L P++
Sbjct: 55 HEEVGLKPEH 64
>sp|Q17VH2|RPPH_HELAH RNA pyrophosphohydrolase OS=Helicobacter acinonychis (strain
Sheeba) GN=rppH PE=3 SV=1
Length = 157
Score = 39.7 bits (91), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 70 YTARANVLMQMRFD--GYIGFPGGLVDAGESPLEALNRELNEEINLN 114
Y V + R D G FP G +D GE+PLEAL REL EEI N
Sbjct: 19 YPNTCEVFIAERVDIEGAWQFPQGGIDEGETPLEALYRELLEEIGTN 65
>sp|A5WHX7|RPPH_PSYWF RNA pyrophosphohydrolase OS=Psychrobacter sp. (strain PRwf-1)
GN=rppH PE=3 SV=1
Length = 173
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 88 FPGGLVDAGESPLEALNRELNEEINLNPKY 117
FP G +D GE+PL+A+ REL EE+ L P++
Sbjct: 35 FPQGGIDEGETPLDAMYRELWEEVGLYPRH 64
>sp|Q9PGA9|RPPH_XYLFA RNA pyrophosphohydrolase OS=Xylella fastidiosa (strain 9a5c)
GN=rppH PE=3 SV=1
Length = 190
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 50 GYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNE 109
GY + ++ D ++F ++R DG+ FP G + + E+P+EA+ RELNE
Sbjct: 6 GYRPNVGIVLMCRDGQVFWG--------RRVRLDGW-QFPQGGMHSDETPVEAMYRELNE 56
Query: 110 EINLNPKY 117
E L P++
Sbjct: 57 ETGLLPEH 64
>sp|A3QBR1|RPPH_SHELP RNA pyrophosphohydrolase OS=Shewanella loihica (strain ATCC
BAA-1088 / PV-4) GN=rppH PE=3 SV=1
Length = 174
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 74 ANVLMQMRFDGY-IGFPGGLVDAGESPLEALNRELNEEINLNPKY-KVKDSDLVCIHYSQ 131
V+ RF + FP G VD GES +A+ REL EE+ L P++ +V S + Y
Sbjct: 20 GQVMWARRFGQHSWQFPQGGVDEGESAEQAMYRELYEEVGLRPEHVQVLTSTRSWLRYRL 79
Query: 132 SKKII 136
K++I
Sbjct: 80 PKRLI 84
>sp|A8H1B1|RPPH_SHEPA RNA pyrophosphohydrolase OS=Shewanella pealeana (strain ATCC 700345
/ ANG-SQ1) GN=rppH PE=3 SV=1
Length = 173
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 74 ANVLMQMRFDGY-IGFPGGLVDAGESPLEALNRELNEEINLNPKY-KVKDSDLVCIHYSQ 131
V+ RF + FP G VD GES EA+ REL EE+ L P++ ++ S + Y
Sbjct: 20 GQVMWARRFGQHSWQFPQGGVDDGESAEEAMYRELYEEVGLKPEHVQILTSTRSWLRYRL 79
Query: 132 SKKII 136
K++I
Sbjct: 80 PKRLI 84
>sp|P08337|MUTT_ECOLI 8-oxo-dGTP diphosphatase OS=Escherichia coli (strain K12) GN=mutT
PE=1 SV=1
Length = 129
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 58 IFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINLNPKY 117
I +++IF T A A+ M + + FPGG ++ GE+P +A+ REL EE+ + P++
Sbjct: 10 IIRNENNEIFITRRA-ADAHMANKLE----FPGGKIEMGETPEQAVVRELQEEVGITPQH 64
>sp|B8CQL0|RPPH_SHEPW RNA pyrophosphohydrolase OS=Shewanella piezotolerans (strain WP3 /
JCM 13877) GN=rppH PE=3 SV=1
Length = 173
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 74 ANVLMQMRFDGY-IGFPGGLVDAGESPLEALNRELNEEINLNPKY-KVKDSDLVCIHYSQ 131
V+ RF + FP G VD GES EA+ REL EE+ L P++ ++ S + Y
Sbjct: 20 GQVMWARRFGQHSWQFPQGGVDEGESAEEAMYRELYEEVGLRPEHVQILASTRSWLRYRL 79
Query: 132 SKKII 136
K++I
Sbjct: 80 PKRLI 84
>sp|B0VEE3|RPPH_ACIBY RNA pyrophosphohydrolase OS=Acinetobacter baumannii (strain AYE)
GN=rppH PE=3 SV=1
Length = 161
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 53/137 (38%), Gaps = 33/137 (24%)
Query: 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELN 108
G+ + +I A +D ++ N FP G + GE+P +AL REL
Sbjct: 5 EGFRPNVGIILANDDGQVLWAKRIGHNAWQ---------FPQGGIQFGETPEQALFRELR 55
Query: 109 EEINLNP-------------------KYKVKDSDLVCIHYSQSKKIILHFYA----LQVE 145
EEI L P +Y DSD VCI Q K +L A +Q+
Sbjct: 56 EEIGLLPEHVQIIAQTKGWLRYRLPHRYIRSDSDPVCIGQKQ-KWFLLKLTAPAKNIQLN 114
Query: 146 KTDVLEIEKGALTSHDY 162
D E ++ S+ Y
Sbjct: 115 LADPPEFDEWQWVSYWY 131
>sp|A3M1S5|RPPH_ACIBT RNA pyrophosphohydrolase OS=Acinetobacter baumannii (strain ATCC
17978 / NCDC KC 755) GN=rppH PE=3 SV=2
Length = 161
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 53/137 (38%), Gaps = 33/137 (24%)
Query: 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELN 108
G+ + +I A +D ++ N FP G + GE+P +AL REL
Sbjct: 5 EGFRPNVGIILANDDGQVLWAKRIGHNAWQ---------FPQGGIQFGETPEQALFRELR 55
Query: 109 EEINLNP-------------------KYKVKDSDLVCIHYSQSKKIILHFYA----LQVE 145
EEI L P +Y DSD VCI Q K +L A +Q+
Sbjct: 56 EEIGLLPEHVQIIAQTKGWLRYRLPHRYIRSDSDPVCIGQKQ-KWFLLKLTAPAKNIQLN 114
Query: 146 KTDVLEIEKGALTSHDY 162
D E ++ S+ Y
Sbjct: 115 LADPPEFDEWQWVSYWY 131
>sp|B0VLB6|RPPH_ACIBS RNA pyrophosphohydrolase OS=Acinetobacter baumannii (strain SDF)
GN=rppH PE=3 SV=1
Length = 161
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 53/137 (38%), Gaps = 33/137 (24%)
Query: 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELN 108
G+ + +I A +D ++ N FP G + GE+P +AL REL
Sbjct: 5 EGFRPNVGIILANDDGQVLWAKRIGHNAWQ---------FPQGGIQFGETPEQALFRELR 55
Query: 109 EEINLNP-------------------KYKVKDSDLVCIHYSQSKKIILHFYA----LQVE 145
EEI L P +Y DSD VCI Q K +L A +Q+
Sbjct: 56 EEIGLLPEHVQIIAQTKGWLRYRLPHRYIRSDSDPVCIGQKQ-KWFLLKLTAPAKNIQLN 114
Query: 146 KTDVLEIEKGALTSHDY 162
D E ++ S+ Y
Sbjct: 115 LADPPEFDEWQWVSYWY 131
>sp|B2I354|RPPH_ACIBC RNA pyrophosphohydrolase OS=Acinetobacter baumannii (strain ACICU)
GN=rppH PE=3 SV=1
Length = 161
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 53/137 (38%), Gaps = 33/137 (24%)
Query: 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELN 108
G+ + +I A +D ++ N FP G + GE+P +AL REL
Sbjct: 5 EGFRPNVGIILANDDGQVLWAKRIGHNAWQ---------FPQGGIQFGETPEQALFRELR 55
Query: 109 EEINLNP-------------------KYKVKDSDLVCIHYSQSKKIILHFYA----LQVE 145
EEI L P +Y DSD VCI Q K +L A +Q+
Sbjct: 56 EEIGLLPEHVQIIAQTKGWLRYRLPHRYIRSDSDPVCIGQKQ-KWFLLKLTAPAKNIQLN 114
Query: 146 KTDVLEIEKGALTSHDY 162
D E ++ S+ Y
Sbjct: 115 LADPPEFDEWQWVSYWY 131
>sp|B7I4D7|RPPH_ACIB5 RNA pyrophosphohydrolase OS=Acinetobacter baumannii (strain AB0057)
GN=rppH PE=3 SV=1
Length = 161
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 53/137 (38%), Gaps = 33/137 (24%)
Query: 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELN 108
G+ + +I A +D ++ N FP G + GE+P +AL REL
Sbjct: 5 EGFRPNVGIILANDDGQVLWAKRIGHNAWQ---------FPQGGIQFGETPEQALFRELR 55
Query: 109 EEINLNP-------------------KYKVKDSDLVCIHYSQSKKIILHFYA----LQVE 145
EEI L P +Y DSD VCI Q K +L A +Q+
Sbjct: 56 EEIGLLPEHVQIIAQTKGWLRYRLPHRYIRSDSDPVCIGQKQ-KWFLLKLTAPAKNIQLN 114
Query: 146 KTDVLEIEKGALTSHDY 162
D E ++ S+ Y
Sbjct: 115 LADPPEFDEWQWVSYWY 131
>sp|B7H0U1|RPPH_ACIB3 RNA pyrophosphohydrolase OS=Acinetobacter baumannii (strain
AB307-0294) GN=rppH PE=3 SV=1
Length = 161
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 53/137 (38%), Gaps = 33/137 (24%)
Query: 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELN 108
G+ + +I A +D ++ N FP G + GE+P +AL REL
Sbjct: 5 EGFRPNVGIILANDDGQVLWAKRIGHNAWQ---------FPQGGIQFGETPEQALFRELR 55
Query: 109 EEINLNP-------------------KYKVKDSDLVCIHYSQSKKIILHFYA----LQVE 145
EEI L P +Y DSD VCI Q K +L A +Q+
Sbjct: 56 EEIGLLPEHVQIIAQTKGWLRYRLPHRYIRSDSDPVCIGQKQ-KWFLLKLTAPAKNIQLN 114
Query: 146 KTDVLEIEKGALTSHDY 162
D E ++ S+ Y
Sbjct: 115 LADPPEFDEWQWVSYWY 131
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,020,615
Number of Sequences: 539616
Number of extensions: 3819418
Number of successful extensions: 9130
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 8913
Number of HSP's gapped (non-prelim): 244
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)