Query psy7748
Match_columns 232
No_of_seqs 230 out of 2063
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 17:47:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7748.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7748hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kvh_A Protein syndesmos; NUDT 100.0 1.7E-33 5.8E-38 218.4 3.5 182 42-228 11-197 (214)
2 1u20_A U8 snoRNA-binding prote 100.0 1.7E-28 5.8E-33 198.5 9.6 191 21-222 13-207 (212)
3 2xsq_A U8 snoRNA-decapping enz 99.9 1.4E-25 4.7E-30 181.9 7.2 193 21-222 21-215 (217)
4 1vhz_A ADP compounds hydrolase 99.9 4.6E-23 1.6E-27 164.8 12.7 146 9-182 8-162 (198)
5 2yvp_A NDX2, MUTT/nudix family 99.9 5.6E-23 1.9E-27 161.8 9.9 144 9-181 2-155 (182)
6 3i7u_A AP4A hydrolase; nudix p 99.9 1.6E-22 5.4E-27 151.9 10.6 108 51-181 4-113 (134)
7 2dsc_A ADP-sugar pyrophosphata 99.9 1.4E-22 4.7E-27 163.6 10.7 155 10-181 16-184 (212)
8 1mk1_A ADPR pyrophosphatase; n 99.9 3.6E-23 1.2E-27 166.5 6.7 148 9-181 4-159 (207)
9 1g0s_A Hypothetical 23.7 kDa p 99.9 3.2E-22 1.1E-26 161.2 9.9 149 10-181 15-180 (209)
10 3o6z_A GDP-mannose pyrophospha 99.9 5E-22 1.7E-26 157.9 9.4 143 18-181 8-167 (191)
11 1v8y_A ADP-ribose pyrophosphat 99.9 1E-21 3.5E-26 152.9 8.1 138 7-181 2-145 (170)
12 3u53_A BIS(5'-nucleosyl)-tetra 99.8 2.9E-20 9.8E-25 142.6 13.2 119 52-181 4-126 (155)
13 3eds_A MUTT/nudix family prote 99.8 4.5E-20 1.5E-24 141.2 9.1 116 50-186 20-141 (153)
14 1ktg_A Diadenosine tetraphosph 99.8 9.9E-19 3.4E-23 130.8 14.8 113 51-181 3-119 (138)
15 4dyw_A MUTT/nudix family prote 99.8 5.4E-19 1.9E-23 135.8 13.5 124 36-181 13-142 (157)
16 2pbt_A AP4A hydrolase; nudix p 99.8 3E-19 1E-23 132.9 10.6 108 51-181 4-113 (134)
17 3q91_A Uridine diphosphate glu 99.8 7.3E-19 2.5E-23 142.3 11.5 134 33-181 18-189 (218)
18 3son_A Hypothetical nudix hydr 99.8 2.2E-18 7.7E-23 130.8 13.6 112 51-181 5-125 (149)
19 1vcd_A NDX1; nudix protein, di 99.8 1.5E-18 5.3E-23 127.8 11.6 105 52-181 3-108 (126)
20 2yyh_A MUTT domain, 8-OXO-DGTP 99.8 4.7E-18 1.6E-22 127.5 14.3 111 49-181 7-124 (139)
21 3q1p_A Phosphohydrolase (MUTT/ 99.8 1.1E-18 3.7E-23 140.0 10.7 111 48-181 65-179 (205)
22 3f6a_A Hydrolase, nudix family 99.8 3.5E-18 1.2E-22 131.3 13.0 109 51-181 6-134 (159)
23 3gg6_A Nudix motif 18, nucleos 99.8 2.7E-18 9.3E-23 131.3 12.2 111 48-182 17-132 (156)
24 1sjy_A MUTT/nudix family prote 99.8 1.3E-18 4.5E-23 133.2 9.7 111 49-181 11-131 (159)
25 3grn_A MUTT related protein; s 99.8 7.6E-18 2.6E-22 128.5 13.9 107 50-181 7-120 (153)
26 2w4e_A MUTT/nudix family prote 99.8 2E-18 6.9E-23 130.8 9.5 110 49-181 3-118 (145)
27 3o8s_A Nudix hydrolase, ADP-ri 99.8 2.8E-18 9.7E-23 137.7 10.3 97 74-181 81-180 (206)
28 3cng_A Nudix hydrolase; struct 99.8 1.9E-17 6.6E-22 131.0 14.8 101 50-178 39-144 (189)
29 2azw_A MUTT/nudix family prote 99.8 7.5E-18 2.6E-22 127.4 11.8 111 50-181 17-131 (148)
30 2fb1_A Conserved hypothetical 99.8 1.6E-17 5.6E-22 135.2 14.5 114 49-181 11-129 (226)
31 3shd_A Phosphatase NUDJ; nudix 99.8 1.6E-17 5.3E-22 126.6 13.5 92 75-177 17-112 (153)
32 2pqv_A MUTT/nudix family prote 99.8 7.8E-18 2.7E-22 128.5 11.6 109 51-180 19-129 (154)
33 3gwy_A Putative CTP pyrophosph 99.7 2.7E-17 9.2E-22 123.6 13.9 92 75-181 18-117 (140)
34 2kdv_A RNA pyrophosphohydrolas 99.7 7.7E-17 2.6E-21 124.7 16.8 117 49-181 6-136 (164)
35 2fkb_A Putative nudix hydrolas 99.7 1.6E-17 5.6E-22 130.0 12.7 110 48-182 34-151 (180)
36 1rya_A GDP-mannose mannosyl hy 99.7 6E-18 2.1E-22 129.7 9.9 110 50-180 17-138 (160)
37 3r03_A Nudix hydrolase; struct 99.7 2.7E-17 9.2E-22 123.8 13.4 94 74-180 20-119 (144)
38 3hhj_A Mutator MUTT protein; n 99.7 3.6E-17 1.2E-21 125.4 14.0 108 49-180 27-140 (158)
39 3q93_A 7,8-dihydro-8-oxoguanin 99.7 4.2E-17 1.4E-21 127.6 14.6 93 75-180 37-134 (176)
40 3oga_A Nucleoside triphosphata 99.7 3E-17 1E-21 126.7 12.7 95 75-180 40-149 (165)
41 3fcm_A Hydrolase, nudix family 99.7 4.9E-17 1.7E-21 129.4 14.0 114 49-181 43-168 (197)
42 3id9_A MUTT/nudix family prote 99.7 4.9E-17 1.7E-21 126.2 13.5 112 49-180 21-135 (171)
43 3i9x_A MUTT/nudix family prote 99.7 1.4E-17 4.9E-22 131.4 10.2 98 74-180 46-155 (187)
44 2o1c_A DATP pyrophosphohydrola 99.7 4E-17 1.4E-21 123.4 12.0 110 51-181 9-133 (150)
45 1f3y_A Diadenosine 5',5'''-P1, 99.7 2.9E-17 1E-21 126.2 11.1 122 48-183 11-148 (165)
46 3h95_A Nucleoside diphosphate- 99.7 2.4E-17 8.1E-22 131.5 10.7 116 47-181 22-141 (199)
47 1hzt_A Isopentenyl diphosphate 99.7 3.6E-17 1.2E-21 129.4 11.3 110 50-181 31-151 (190)
48 3gz5_A MUTT/nudix family prote 99.7 2.1E-17 7.2E-22 135.7 10.2 133 51-206 22-162 (240)
49 3fk9_A Mutator MUTT protein; s 99.7 7.2E-17 2.5E-21 127.7 12.8 94 75-180 16-114 (188)
50 3exq_A Nudix family hydrolase; 99.7 5.8E-17 2E-21 124.8 11.4 108 51-181 10-122 (161)
51 3ees_A Probable pyrophosphohyd 99.7 1.4E-16 4.7E-21 120.9 13.2 92 74-180 33-130 (153)
52 3f13_A Putative nudix hydrolas 99.7 1.2E-16 4.3E-21 123.6 13.1 85 75-178 28-113 (163)
53 2b0v_A Nudix hydrolase; struct 99.7 6E-17 2.1E-21 123.1 11.0 96 75-180 20-120 (153)
54 2jvb_A Protein PSU1, mRNA-deca 99.7 2.8E-17 9.7E-22 124.2 8.8 124 52-196 5-132 (146)
55 2b06_A MUTT/nudix family prote 99.7 1.9E-16 6.4E-21 120.8 13.0 110 50-181 7-120 (155)
56 1nqz_A COA pyrophosphatase (MU 99.7 5.9E-17 2E-21 128.5 10.2 112 48-179 31-150 (194)
57 1vk6_A NADH pyrophosphatase; 1 99.7 3.8E-16 1.3E-20 130.1 15.2 93 74-181 151-247 (269)
58 2fvv_A Diphosphoinositol polyp 99.7 8.4E-17 2.9E-21 128.0 10.7 114 47-182 36-152 (194)
59 2fml_A MUTT/nudix family prote 99.7 2.9E-16 1E-20 131.2 14.2 142 48-207 36-204 (273)
60 1k2e_A Nudix homolog; nudix/MU 99.7 2.3E-16 7.7E-21 120.8 12.3 42 75-116 13-55 (156)
61 1q27_A Putative nudix hydrolas 99.7 6.4E-17 2.2E-21 125.6 8.7 107 51-181 34-149 (171)
62 2rrk_A ORF135, CTP pyrophospho 99.7 3.4E-16 1.1E-20 117.1 11.2 92 75-181 21-118 (140)
63 1mut_A MUTT, nucleoside tripho 99.7 1.8E-16 6.2E-21 116.9 9.0 92 74-180 16-113 (129)
64 2qjo_A Bifunctional NMN adenyl 99.6 6.3E-16 2.1E-20 132.6 10.5 113 48-180 200-322 (341)
65 2qjt_B Nicotinamide-nucleotide 99.6 2.5E-15 8.7E-20 129.5 13.3 114 48-180 205-329 (352)
66 2a6t_A SPAC19A8.12; alpha/beta 99.6 1.3E-15 4.5E-20 127.0 10.9 110 51-181 101-213 (271)
67 3dup_A MUTT/nudix family prote 99.6 3.5E-15 1.2E-19 125.6 11.0 143 48-213 115-270 (300)
68 3fjy_A Probable MUTT1 protein; 99.6 3.5E-15 1.2E-19 129.5 10.2 109 72-181 36-159 (364)
69 1q33_A Pyrophosphatase, ADP-ri 99.6 2.5E-14 8.6E-19 120.5 14.8 153 23-181 77-263 (292)
70 1x51_A A/G-specific adenine DN 99.6 3.2E-15 1.1E-19 114.1 8.5 91 74-180 34-133 (155)
71 2dho_A Isopentenyl-diphosphate 99.6 5.8E-15 2E-19 120.7 10.4 112 49-182 57-192 (235)
72 2pny_A Isopentenyl-diphosphate 99.6 1.1E-14 3.8E-19 119.8 10.5 112 49-182 68-203 (246)
73 3e57_A Uncharacterized protein 99.6 2E-15 7E-20 120.9 5.8 113 48-184 64-192 (211)
74 3fsp_A A/G-specific adenine gl 99.4 6.8E-13 2.3E-17 115.3 11.6 88 74-180 252-345 (369)
75 3qsj_A Nudix hydrolase; struct 99.4 1.1E-12 3.8E-17 106.7 9.2 61 49-116 6-92 (232)
76 3bho_A Cleavage and polyadenyl 99.1 4.4E-10 1.5E-14 88.4 11.6 114 48-180 55-185 (208)
77 3rh7_A Hypothetical oxidoreduc 99.0 3.4E-10 1.2E-14 96.2 7.3 81 74-180 194-276 (321)
78 3a8g_B NitrIle hydratase subun 20.3 84 0.0029 24.4 3.4 39 189-227 69-107 (212)
No 1
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.97 E-value=1.7e-33 Score=218.43 Aligned_cols=182 Identities=37% Similarity=0.579 Sum_probs=158.6
Q ss_pred cccccc-CCccceEEEEEEecCCceEEEEeccCcEEEEEEeeCCeeecceeecCCCC-CHHHHHhHHHHHhhCC-CCc-c
Q psy7748 42 LKDDKY-KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGE-SPLEALNRELNEEINL-NPK-Y 117 (232)
Q Consensus 42 ~~~~~~-~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~~g~w~lPgG~ve~gE-s~~~aa~REl~EEtGl-~~~-~ 117 (232)
.+.+.+ ++++++|.++++.++...+|+.++-+..+|+|.|++|.|+||||+||+|| |+++|+.||+.||+|+ .+. .
T Consensus 11 ~eal~~~~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~ 90 (214)
T 3kvh_A 11 VEAMRLGPGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEA 90 (214)
T ss_dssp HHHTTSCTTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGG
T ss_pred HHHHhhccCccEeeEEEEEcCCccccccccchhheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeee
Confidence 344555 78999999999999999999888888899999999999999999999999 9999999999999997 455 2
Q ss_pred eeeeceeeeeeecCC-cEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccccCCchHHHHHHHHHHH
Q psy7748 118 KVKDSDLVCIHYSQS-KKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFRGLPCFLTHSFIGNA 196 (232)
Q Consensus 118 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i~~~~~~l~~~~i~~~ 196 (232)
... ....... ..+..+||.|.+..+++...+.++....|.+.|++....||+..+.+.+.++|+|+.|.|++++
T Consensus 91 ~y~-----~s~~~~yp~~V~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPlytl~D~~gGlP~FL~nsFig~a 165 (214)
T 3kvh_A 91 DYL-----SSHLTEGPHRVVAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQKDRVGGFPNFLSNAFVSTA 165 (214)
T ss_dssp GEE-----EEEEC----CEEEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCCBCTTSSTBHHHHHTSCBCTTH
T ss_pred eeE-----EEEeccCCCEEEEEEEEEEeeCCccchhhhcccCCcccCceecceEEeeeEEeccCCCchhHHHHhhhHHHH
Confidence 221 1111111 3688999999999999988888888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHhcCCCCccc
Q psy7748 197 KHQLLAALLKLKILSPEEINQALNAKPVPVKV 228 (232)
Q Consensus 197 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 228 (232)
|+||+.+|+..++++++++.+|..++.++||.
T Consensus 166 r~qLl~aL~~l~ll~~~~~~~a~~~~~~~~~~ 197 (214)
T 3kvh_A 166 KCQLLFALKVLNMMPEEKLVEALAAATEKQKK 197 (214)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHhccCcchh
Confidence 99999999999999999999999999998874
No 2
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.95 E-value=1.7e-28 Score=198.49 Aligned_cols=191 Identities=38% Similarity=0.609 Sum_probs=149.3
Q ss_pred eeeecCCccCccccccccCCcccccccCCccceEEEEEEecCCceEEEEeccCcEEEEEEeeCCeeecceeecCCCC-CH
Q psy7748 21 TEVYGRPSTNLNDFIELTQSDLKDDKYKSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGE-SP 99 (232)
Q Consensus 21 ~~vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~~g~w~lPgG~ve~gE-s~ 99 (232)
..+|+++|+++.+.+.+|++ ++++.++++.++..+++.+...++.+|+++|++|.|+||||++++|| |+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~~~vv~~i~~~~~~vLl~~r~~g~w~~PGG~ve~gE~t~ 82 (212)
T 1u20_A 13 EDKPRPRNISREESLQLEGY----------KHACHALLHAPSQAKLFDRVPIRRVLLMMMRFDGRLGFPGGFVDTRDISL 82 (212)
T ss_dssp -CCCCSEECCHHHHHSCSSC----------EEEEEEEEEEECCCEETTTEECCEEEEEEEETTSCEECSEEEECTTTSCH
T ss_pred ccccccccCCHHHHhhcCCC----------cccceEEEeCCCceEEEEEEecCCEEEEEEeCCCeEECCCcccCCCCCCH
Confidence 37899999988766666554 56788888888877777766777889999999999999999999999 99
Q ss_pred HHHHhHHHHHhhCCCCc-ceee--eceeeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcc
Q psy7748 100 LEALNRELNEEINLNPK-YKVK--DSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYT 176 (232)
Q Consensus 100 ~~aa~REl~EEtGl~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~e 176 (232)
++||+||++||||+.+. ..+. ..........+ .+...++|.+.+..+.+...+.+...+.+.+.|+.++.|+|+++
T Consensus 83 ~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~e 161 (212)
T 1u20_A 83 EEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYT 161 (212)
T ss_dssp HHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSB
T ss_pred HHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHH
Confidence 99999999999999987 4321 11111112122 36777888888765544433333334444556899999999999
Q ss_pred cccccCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q psy7748 177 MGDGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSPEEINQALNAK 222 (232)
Q Consensus 177 l~~~i~~~~~~l~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 222 (232)
+.+....+|.|+.+.++..++.+++..|...++++.+++.+|..++
T Consensus 162 l~~~~~~~p~f~~~~~i~~a~~~l~~~l~~~~~~~~~~~~~~~~~~ 207 (212)
T 1u20_A 162 LRDRVGGLPAFLCNNFIGNSKSQLLYALRSLKLLREDQIQEVLKAS 207 (212)
T ss_dssp CTTSSTBHHHHTTSCBCTTHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred hhhhhcCCchhhhhhhhHHHHHHHHHHHHhCCCCChHHHHHHHHhh
Confidence 9988888899988999999999999999999999999999998765
No 3
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.92 E-value=1.4e-25 Score=181.86 Aligned_cols=193 Identities=39% Similarity=0.667 Sum_probs=121.1
Q ss_pred eeeecCCccCccccccccCCcccccccCCccceEEEEEEecCCceEEEEeccCcEEEEEEeeCCeeecceeecCCCC-CH
Q psy7748 21 TEVYGRPSTNLNDFIELTQSDLKDDKYKSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGE-SP 99 (232)
Q Consensus 21 ~~vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~~g~w~lPgG~ve~gE-s~ 99 (232)
.-+|.+..++..+.+.++++ ++++|..+++.++...++++......+|++.|++|.|+||||++|+|| ++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~g---------~~~~~~~~~~~~~~~~v~~vi~~~~~~ll~~r~~g~w~lPGG~ve~gE~t~ 91 (217)
T 2xsq_A 21 QSMAGARRLELGEALALGSG---------WRHVCHALLYAPDPGMLFGRIPLRYAILMQMRFDGRLGFPGGFVDTQDRSL 91 (217)
T ss_dssp -----CEEECHHHHHTSCTT---------CEEEEEEEEEEEEEEEETTTEEEEEEEEEEEETTSCEECSEEECCTTCSSH
T ss_pred ccccccccccHHHhhhccCC---------ceeEeeeEEEcCCCcEEEEEEEeeCcEEEEEccCCeEECCceecCCCCCCH
Confidence 34555555655444444343 344566666664333331111111246777888999999999999999 99
Q ss_pred HHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccc
Q psy7748 100 LEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMG 178 (232)
Q Consensus 100 ~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~ 178 (232)
++||+||++||||+.+. ..+....+.........+.+.++|.+.+..+.....+.......+++.|.+++.|+|++++.
T Consensus 92 ~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 92 EDGLNRELREELGEAAAAFRVERTDYRSSHVGSGPRVVAHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp HHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSSSSEEEEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred HHHHHHHHHHHHCCCCccceeEEEEEEeecCCCCCeEEEEEEEEEeccccceecccccccccccCCceeeEEEEEHHHhh
Confidence 99999999999999886 22222222222222234677888888876544322222222223334689999999999998
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhcC
Q psy7748 179 DGFRGLPCFLTHSFIGNAKHQLLAALLKLKILSPEEINQALNAK 222 (232)
Q Consensus 179 ~~i~~~~~~l~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 222 (232)
+.+..+|.++.+.|+..+..++++.|.+.|+++.++|++|..++
T Consensus 172 d~~~~~P~~L~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~ 215 (217)
T 2xsq_A 172 DGVGGLPTFLENSFIGSAREQLLEALQDLGLLQSGSISGLKIPA 215 (217)
T ss_dssp TSSTBHHHHTTSCBCTTHHHHHHHHHHHTTTTC-----------
T ss_pred hccccCcHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcc
Confidence 77778899888889999999999999999999999999997664
No 4
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.89 E-value=4.6e-23 Score=164.80 Aligned_cols=146 Identities=22% Similarity=0.183 Sum_probs=101.8
Q ss_pred CCCCcccccceeeeeecCCccCcc-ccccccCCcccccccCC--ccceEEEEEEecCCceEEEEeccCcEEEEEEe--e-
Q psy7748 9 RTWGSSAWNLAATEVYGRPSTNLN-DFIELTQSDLKDDKYKS--GYHASHCMIFAYNDDKIFATYTARANVLMQMR--F- 82 (232)
Q Consensus 9 ~~w~~~~~~~~~~~vy~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R--~- 82 (232)
+.|.. ++++++|+++|++++ +++++|+|....+.... ...++++++++.+ .+|+.+| .
T Consensus 8 ~~~~~----~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~~~~~~~~av~vl~~~~~------------~vLLvrq~r~~ 71 (198)
T 1vhz_A 8 QKPTI----LNVETVARSRLFTVESVDLEFSNGVRRVYERMRPTNREAVMIVPIVDD------------HLILIREYAVG 71 (198)
T ss_dssp CCCEE----EEEEEEEECSSCEEEEEEEECTTSCEEEEEEECCCCCCEEEEEEEETT------------EEEEEEEEETT
T ss_pred CCcEE----eeEEEEEECCEEEEEEEEEEcCCCCEEEEEEEEeCCCCEEEEEEEECC------------EEEEEEcccCC
Confidence 45777 999999999999999 99999999876665533 3445666656654 2344433 2
Q ss_pred --CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCcccccccccccc
Q psy7748 83 --DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTS 159 (232)
Q Consensus 83 --~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (232)
++.|+||||++|+||++++||+||++||||+.+. ...+...+.... ......++|.+.........
T Consensus 72 ~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~---~~~~~~~~f~a~~~~~~~~~-------- 140 (198)
T 1vhz_A 72 TESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPS---YFSSKMNIVVAQDLYPESLE-------- 140 (198)
T ss_dssp TTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEECCTT---TCCCEEEEEEEEEEEECCCC--------
T ss_pred CCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEEEEEEeCCCC---ccCcEEEEEEEEeCCcccCC--------
Confidence 2589999999999999999999999999999987 544443332211 22334455666543221110
Q ss_pred cCCCccceeeEeeeCcccccccC
Q psy7748 160 HDYGVEVLGTVRVPLYTMGDGFR 182 (232)
Q Consensus 160 ~~~~~E~~~~~wvpl~el~~~i~ 182 (232)
.+ +.|.+++.|+|++++.+++.
T Consensus 141 ~~-~~E~~~~~w~~~~el~~~~~ 162 (198)
T 1vhz_A 141 GD-EPEPLPQVRWPLAHMMDLLE 162 (198)
T ss_dssp CC-CSSCCCEEEEEGGGGGGGGG
T ss_pred CC-CCceEEEEEEEHHHHHHHHH
Confidence 11 25889999999999999863
No 5
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.88 E-value=5.6e-23 Score=161.76 Aligned_cols=144 Identities=19% Similarity=0.220 Sum_probs=106.5
Q ss_pred CCCCcccccceeeeeecCCccCcc-ccccccCCcc-cccccCCccceEEEEEEecCCceEEEEeccCcEEEEEEee----
Q psy7748 9 RTWGSSAWNLAATEVYGRPSTNLN-DFIELTQSDL-KDDKYKSGYHASHCMIFAYNDDKIFATYTARANVLMQMRF---- 82 (232)
Q Consensus 9 ~~w~~~~~~~~~~~vy~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~---- 82 (232)
.+|.. ++++++|+++ +++. +.+++|+|.. ..+.+...+.++++++++.++ .+|+.+|.
T Consensus 2 ~~~~~----~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~i~~~~~-----------~vLL~~r~~~~~ 65 (182)
T 2yvp_A 2 SPWER----ILLEEILSEP-VRLVKERVRTHTGRELTYVYRPGPVAASFVLPVTERG-----------TALLVRQYRHPT 65 (182)
T ss_dssp CSSEE----EEEEEEECSS-SCEEEEEEECTTSCEEEEEEBCSSCEEEEEEEBCTTS-----------EEEEEEEEEGGG
T ss_pred CCceE----eeeEEEEeCc-EEEEEEEEECCCCCEeeEEEEEecCCEEEEEEEcCCC-----------EEEEEEeccCCC
Confidence 34766 9999999999 9999 9999999987 677777777788888887663 45555553
Q ss_pred -CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeec--Cccccccccccc
Q psy7748 83 -DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEK--TDVLEIEKGALT 158 (232)
Q Consensus 83 -~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 158 (232)
+|.|+||||++++|||+++||+||++||||+.+. ...+...+.. ....+...++|.+.... +...
T Consensus 66 ~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~---~~~~~~~~~~f~~~~~~~~~~~~-------- 134 (182)
T 2yvp_A 66 GKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIPLPSFHPQ---PSFTAVVFHPFLALKARVVTPPT-------- 134 (182)
T ss_dssp TEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEECCCBCSC---TTTBCCEEEEEEECSCEECSCCC--------
T ss_pred CCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEEEEEEeCC---CCccccEEEEEEEeccccCCCCC--------
Confidence 4799999999999999999999999999999987 5444433221 11234455666665321 1111
Q ss_pred ccCCCccceeeEeeeCccccccc
Q psy7748 159 SHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 159 ~~~~~~E~~~~~wvpl~el~~~i 181 (232)
. .+.|..++.|+|++++.+++
T Consensus 135 -~-~~~E~~~~~W~~~~el~~~~ 155 (182)
T 2yvp_A 135 -L-EEGELLESLELPLTEVYALL 155 (182)
T ss_dssp -C-CTTCCEEEEEEEHHHHHHHH
T ss_pred -C-CCCceEEEEEEEHHHHHHHH
Confidence 1 12588999999999999875
No 6
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.88 E-value=1.6e-22 Score=151.91 Aligned_cols=108 Identities=17% Similarity=0.185 Sum_probs=79.6
Q ss_pred cceEEEEEEecCCceEEEEeccCcEEEEEEeeCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeece-eeeee
Q psy7748 51 YHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSD-LVCIH 128 (232)
Q Consensus 51 ~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~-~~~~~ 128 (232)
+.+|++|+++.+ ++|+.+|.+|.|.||||++|+|||+.+||+||++||||+.+. ...+... +.+..
T Consensus 4 ~~aag~vv~~~~------------~vLL~~r~~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~ 71 (134)
T 3i7u_A 4 EFSAGGVLFKDG------------EVLLIKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTL 71 (134)
T ss_dssp EEEEEEEEEETT------------EEEEEECTTSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEECC------------EEEEEEeCCCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeeeeeeeeEEecC
Confidence 457788887643 577888888999999999999999999999999999999987 4443332 22222
Q ss_pred ecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 129 YSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.+...+...++|.+....+.+.+. .|..++.|+|++++++++
T Consensus 72 ~~~~~~~~~~~f~~~~~~~~~~~~-----------~E~~~~~W~~~~e~~~~l 113 (134)
T 3i7u_A 72 KGERIFKTVKYYLMKYKEGEPRPS-----------WEVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp TTEEEEEEEEEEEEEEEEECCCCC-----------TTSSEEEEEEHHHHHHHB
T ss_pred CCceEEEEEEEEEEEEcCCcCcCC-----------hhheEEEEEEHHHHhhhc
Confidence 222234456778887765544322 478899999999999876
No 7
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.88 E-value=1.4e-22 Score=163.63 Aligned_cols=155 Identities=14% Similarity=0.125 Sum_probs=102.3
Q ss_pred CCCcccccceeeeeecCCccCcc-ccccccCCcccccccCC-------ccceEEEEEEecCCceEEEEeccCcEEEE--E
Q psy7748 10 TWGSSAWNLAATEVYGRPSTNLN-DFIELTQSDLKDDKYKS-------GYHASHCMIFAYNDDKIFATYTARANVLM--Q 79 (232)
Q Consensus 10 ~w~~~~~~~~~~~vy~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~a~~~vi~~~~~~~v~~~~~~~~~vLl--~ 79 (232)
+|.. ++++.+|+++|++++ +.+++|+|....+.... ...+++++++..++. .+..+|+ |
T Consensus 16 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~av~v~~v~~~~~-------~~~~vlLv~q 84 (212)
T 2dsc_A 16 KQYI----ISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTL-------HYECIVLVKQ 84 (212)
T ss_dssp CCEE----EEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEETTCCTTSCSEEEEEEEEECTT-------SCCEEEEEEE
T ss_pred CceE----eeEEEEeeCCEEEEEEEEEECCCCCEEEEEEEEeeccCCCCCCEEEEEEEEeCCC-------CCcEEEEEEe
Confidence 4776 999999999999999 99999999776655522 245666665544321 0123444 4
Q ss_pred Eee---CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCcccccccc
Q psy7748 80 MRF---DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKG 155 (232)
Q Consensus 80 ~R~---~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (232)
+|. ++.|+||||++|+||++++||+||++||||+.+. ..++...+..... .....++|.+.+.........
T Consensus 85 ~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~---~~~~~~~~~a~~~~~~~~~~~-- 159 (212)
T 2dsc_A 85 FRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGL---SNCTIHIVTVTINGDDAENAR-- 159 (212)
T ss_dssp EEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEECCCEESCTTT---BCCEEEEEEEEEETTSGGGSS--
T ss_pred ecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEEeccEEcCCCc---cCceEEEEEEEEeCccccccC--
Confidence 454 2589999999999999999999999999999987 5444333322221 223445555554332211000
Q ss_pred cccccCCCccceeeEeeeCccccccc
Q psy7748 156 ALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 156 ~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.....+ +.|.+++.|+|++++.+++
T Consensus 160 ~~~~~~-~~E~~~~~w~~~~el~~~~ 184 (212)
T 2dsc_A 160 PKPKPG-DGEFVEVISLPKNDLLQRL 184 (212)
T ss_dssp CCCCCC-TTCCCEEEEEEGGGHHHHH
T ss_pred CCCCCC-CCceEEEEEEEHHHHHHHH
Confidence 001112 3589999999999999876
No 8
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.88 E-value=3.6e-23 Score=166.51 Aligned_cols=148 Identities=16% Similarity=0.189 Sum_probs=96.7
Q ss_pred CCCCcccccceeeeeecCCccCcc-ccccccCCcccccccCCccceEEEEEEecCCceEEEEeccCcEEEEEEee-----
Q psy7748 9 RTWGSSAWNLAATEVYGRPSTNLN-DFIELTQSDLKDDKYKSGYHASHCMIFAYNDDKIFATYTARANVLMQMRF----- 82 (232)
Q Consensus 9 ~~w~~~~~~~~~~~vy~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~----- 82 (232)
.+|.. ++++.+|+++|++++ +.+.+|+|....+.+.....++++++++.++ ++|+.+|+
T Consensus 4 ~~~~~----~~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~~~~~~av~v~i~~~~~-----------~vLLvrr~r~~~~ 68 (207)
T 1mk1_A 4 HDFET----ISSETLHTGAIFALRRDQVRMPGGGIVTREVVEHFGAVAIVAMDDNG-----------NIPMVYQYRHTYG 68 (207)
T ss_dssp --CCE----EEEEEEEECSSEEEEEEEEC-----CEEEEEEEECCEEEEEECCTTS-----------EEEEEEEEETTTT
T ss_pred CCcEE----EeEEEEEeCCEEEEEEEEEECCCCCEEEEEEEeCCCEEEEEEEcCCC-----------EEEEEEeecCCCC
Confidence 55887 999999999999999 9999999987766666666777777777553 45555442
Q ss_pred CCeeecceeecC-CCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCccccccccccccc
Q psy7748 83 DGYIGFPGGLVD-AGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSH 160 (232)
Q Consensus 83 ~g~w~lPgG~ve-~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (232)
+|.|+||||+++ +||++++||+||++||||+.+. ...+...+.... ......++|.+.......... ..
T Consensus 69 ~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~---~~~~~~~~f~~~~~~~~~~~~------~~ 139 (207)
T 1mk1_A 69 RRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPG---FSDESVRVYLATGLREVGRPE------AH 139 (207)
T ss_dssp EEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEEECSCTT---TBCCCEEEEEEEEEEECCC----------
T ss_pred CcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEEEEEEEcCCC---ccccEEEEEEEEccccCCCCC------CC
Confidence 368999999999 9999999999999999999987 544433332221 222244556665433222110 01
Q ss_pred CCCccceeeEeeeCccccccc
Q psy7748 161 DYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 161 ~~~~E~~~~~wvpl~el~~~i 181 (232)
+ +.|..++.|+|++++.+++
T Consensus 140 ~-~~E~~~~~Wv~~~el~~~~ 159 (207)
T 1mk1_A 140 H-EEADMTMGWYPIAEAARRV 159 (207)
T ss_dssp -------CEEEEEHHHHHHHH
T ss_pred C-CCceEEEEEEEHHHHHHHH
Confidence 1 2588999999999999875
No 9
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.87 E-value=3.2e-22 Score=161.22 Aligned_cols=149 Identities=19% Similarity=0.084 Sum_probs=99.9
Q ss_pred CCCcccccceeeeeecCCccCcc-cccc--ccCCc---ccccccCCccceEEEEEEecCCceEEEEeccCcEEEE--EEe
Q psy7748 10 TWGSSAWNLAATEVYGRPSTNLN-DFIE--LTQSD---LKDDKYKSGYHASHCMIFAYNDDKIFATYTARANVLM--QMR 81 (232)
Q Consensus 10 ~w~~~~~~~~~~~vy~~~~~~~~-~~~~--~~~~~---~~~~~~~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl--~~R 81 (232)
.|.. ++++++|++ |++++ +.+. +|+|+ ...+.+.....++++++++++++ .+|+ |+|
T Consensus 15 ~~~~----~~~~~v~~g-~~~v~~~~~~~~~~~g~~~~~~~r~~~~~~~av~vl~~~~~~~----------~vLLvrq~R 79 (209)
T 1g0s_A 15 DVEI----IARETLYRG-FFSLDLYRFRHRLFNGQMSHEVRREIFERGHAAVLLPFDPVRD----------EVVLIEQIR 79 (209)
T ss_dssp GEEE----EEEEEEEES-SSEEEEEEEEEBCTTSCBCCCEEEEEEECCCEEEEEEEETTTT----------EEEEEEEEC
T ss_pred CcEE----EEEEEEEee-eEEEEEEEEEEEcCCCCcceEEEEEEEeCCCEEEEEEEECCCC----------EEEEEEeec
Confidence 4666 899999998 99999 7665 68874 33344455667888888875432 3344 556
Q ss_pred e--------CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCccccc
Q psy7748 82 F--------DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEI 152 (232)
Q Consensus 82 ~--------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (232)
. ++.|+||||++|+||++++||+||++||||+.+. +..+...+...+ ......++|.+.........
T Consensus 80 ~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~~~~~~g---~~~~~~~~f~a~~~~~~~~~- 155 (209)
T 1g0s_A 80 IAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPG---GTSERSSIMVGEVDATTASG- 155 (209)
T ss_dssp GGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEEEEEEESCTT---TBCCEEEEEEEECCGGGCC--
T ss_pred ccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEEeEEEecCCC---ccCcEEEEEEEEEccccccC-
Confidence 3 3679999999999999999999999999999987 554444332222 22345566776653211100
Q ss_pred ccccccccCCCccceeeEeeeCccccccc
Q psy7748 153 EKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 153 ~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.....+ +.|.+++.|+|++++.+++
T Consensus 156 ---~~~~~~-e~E~~~~~w~~~~el~~~i 180 (209)
T 1g0s_A 156 ---IHGLAD-ENEDIRVHVVSREQAYQWV 180 (209)
T ss_dssp -----------CCSCEEEEEEHHHHHHHH
T ss_pred ---CCCCCC-CCcEEEEEEEEHHHHHHHH
Confidence 000112 2588999999999999875
No 10
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.86 E-value=5e-22 Score=157.87 Aligned_cols=143 Identities=13% Similarity=0.170 Sum_probs=93.7
Q ss_pred ceeeeeecCCccCcc-ccccc--cCCcccc--cccCCccceEEEEEEecCCceEEEEeccCcEEEE--EEe---------
Q psy7748 18 LAATEVYGRPSTNLN-DFIEL--TQSDLKD--DKYKSGYHASHCMIFAYNDDKIFATYTARANVLM--QMR--------- 81 (232)
Q Consensus 18 ~~~~~vy~~~~~~~~-~~~~~--~~~~~~~--~~~~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl--~~R--------- 81 (232)
++++.+|. +|++++ +.+.+ |+|.... ........++++++++.+.+ .+|+ ++|
T Consensus 8 ~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~r~~~~~~~av~v~~~~~~~~----------~vlLv~~~r~~~~~~~~~ 76 (191)
T 3o6z_A 8 IKDKILSD-NYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKK----------TVVLIRQFRVATWVNGNE 76 (191)
T ss_dssp EEEEEEEC-SSSEEEEEEEEEECTTSCEEEEEEEEEECCCEEEEEEEETTTT----------EEEEEEEECHHHHTTTCT
T ss_pred eEeEEEec-CcEEEEEEEEEEECCCCCEEEEEEEEEecCCEEEEEEEECCCC----------EEEEEEcCCccccccCCC
Confidence 77777766 999999 77754 8886422 23344556777777775433 3344 344
Q ss_pred eCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCccccccccccccc
Q psy7748 82 FDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSH 160 (232)
Q Consensus 82 ~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (232)
.++.|+||||++| ||++++||+||++||||+.+. ...+...+.... ......++|.+........... + ..
T Consensus 77 ~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~~~~~~~---~~~~~~~~f~~~~~~~~~~~~~-~---~~ 148 (191)
T 3o6z_A 77 SGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEVRKLFELYMSPG---GVTELIHFFIAEYSDNQRANAG-G---GV 148 (191)
T ss_dssp TCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCEEEEEEEESCTT---TBCCEEEEEEEECCTTCC-----------
T ss_pred CCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcEEEEEEEEeCCC---ccCcEEEEEEEEEcccccccCC-C---CC
Confidence 3468999999999 999999999999999999987 554444333221 2334566777765432211100 0 01
Q ss_pred CCCccceeeEeeeCccccccc
Q psy7748 161 DYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 161 ~~~~E~~~~~wvpl~el~~~i 181 (232)
+.|.+++.|+|++++.+++
T Consensus 149 --~~E~~~~~w~~~~el~~~~ 167 (191)
T 3o6z_A 149 --EDEAIEVLELPFSQALEMI 167 (191)
T ss_dssp ---CCSSEEEEEEHHHHHHHH
T ss_pred --CCcEEEEEEEEHHHHHHHH
Confidence 2589999999999999876
No 11
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.85 E-value=1e-21 Score=152.92 Aligned_cols=138 Identities=21% Similarity=0.179 Sum_probs=85.4
Q ss_pred CCCCCCcccccceeeeeecCCccCccccccccCCcccccccCCccceEEEEEEecCCceEEEEeccCcEEEEEEe-----
Q psy7748 7 GDRTWGSSAWNLAATEVYGRPSTNLNDFIELTQSDLKDDKYKSGYHASHCMIFAYNDDKIFATYTARANVLMQMR----- 81 (232)
Q Consensus 7 ~~~~w~~~~~~~~~~~vy~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R----- 81 (232)
|+.+|.. ++++.+|+++|++++.. ..+.+..++.++++++++ ++ ++|+.+|
T Consensus 2 ~~~~~~~----~~~~~~~~~~~~~v~~~--------~~~~~~~~~~~v~vii~~-~~-----------~vLL~~~~r~~~ 57 (170)
T 1v8y_A 2 GRVYYGG----VERTYLYRGRILNLALE--------GRYEIVEHKPAVAVIALR-EG-----------RMLFVRQMRPAV 57 (170)
T ss_dssp -------------CEEEEECSSEEEEEE--------TTEEEEEECCEEEEEEEE-TT-----------EEEEEECCBTTT
T ss_pred CCCceEE----EeEEEEEECCeEEEEEE--------eeEEEEecCCeEEEEEEE-CC-----------EEEEEEEEeCCC
Confidence 5567888 99999999999999822 233334455678888877 53 4455444
Q ss_pred eCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCccccccccccccc
Q psy7748 82 FDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSH 160 (232)
Q Consensus 82 ~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (232)
++|.|+||||++++|||+++||+||++||||+ +. ...+...+.. ....+...++|.+......... .
T Consensus 58 ~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~~~~---~~~~~~~~~~f~~~~~~~~~~~--------~ 125 (170)
T 1v8y_A 58 GLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTYLFSYFVS---PGFTDEKTHVFLAENLKEVEAH--------P 125 (170)
T ss_dssp TBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEEESC---TTTBCCEEEEEEEEEEEECC-----------
T ss_pred CCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCceeeEEEecC---CCccccEEEEEEEEeccccCCC--------C
Confidence 24789999999999999999999999999999 76 5444333221 1122345566666543321111 1
Q ss_pred CCCccceeeEeeeCccccccc
Q psy7748 161 DYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 161 ~~~~E~~~~~wvpl~el~~~i 181 (232)
+ +.|..++.|+|++++.+++
T Consensus 126 ~-~~E~~~~~W~~~~el~~~~ 145 (170)
T 1v8y_A 126 D-EDEAIEVVWMRPEEALERH 145 (170)
T ss_dssp ------CEEEEECHHHHHHHH
T ss_pred C-CCceEEEEEEEHHHHHHHH
Confidence 1 2578899999999999875
No 12
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.84 E-value=2.9e-20 Score=142.59 Aligned_cols=119 Identities=18% Similarity=0.084 Sum_probs=79.7
Q ss_pred ceEEEEEEecCCceEEEEeccCcEEEEEEee--CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeece-eeee
Q psy7748 52 HASHCMIFAYNDDKIFATYTARANVLMQMRF--DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSD-LVCI 127 (232)
Q Consensus 52 ~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~-~~~~ 127 (232)
++|++++++.. ++..+.+++.++|+.+|. +|.|.||||++|+|||+.+||+||++||||+.+. ....... ....
T Consensus 4 ra~G~iifr~~--~~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 81 (155)
T 3u53_A 4 RACGLIIFRRC--LIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELN 81 (155)
T ss_dssp CEEEEEEEEEC--CCSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEE
T ss_pred eEeEEEEEccc--cccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeeee
Confidence 47899998742 111223455677777773 4789999999999999999999999999999987 4433222 2222
Q ss_pred eecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 128 HYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
..........++|.+.......... .+.|..++.|++++++.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~E~~~~~W~~~~ea~~~~ 126 (155)
T 3u53_A 82 YVARNKPKTVIYWLAEVKDYDVEIR---------LSHEHQAYRWLGLEEACQLA 126 (155)
T ss_dssp EEETTEEEEEEEEEEEESCTTCCCC---------CCTTEEEEEEECHHHHHHHH
T ss_pred cCCCcceeEEEEEEEEEeccCCccC---------CCcceeEEEEeEHHHHHHHc
Confidence 2233344555566665543322111 12488899999999988875
No 13
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.81 E-value=4.5e-20 Score=141.18 Aligned_cols=116 Identities=22% Similarity=0.179 Sum_probs=75.9
Q ss_pred ccceEEEEEEecCCceEEEEeccCcEEEEEEeeCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeecee----
Q psy7748 50 GYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDL---- 124 (232)
Q Consensus 50 ~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~---- 124 (232)
.+.++++++++.+ ++||+++|.+|.|+||||++++||++.+||+||++||||+.+. ..++....
T Consensus 20 ~~~~v~~ii~~~~-----------~~vLL~~r~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 88 (153)
T 3eds_A 20 FXPSVAAVIKNEQ-----------GEILFQYPGGEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKEY 88 (153)
T ss_dssp EEEEEEEEEBCTT-----------CCEEEECC---CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGGG
T ss_pred EeeeEEEEEEcCC-----------CeEEEEEcCCCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccce
Confidence 3455666666654 3567788888999999999999999999999999999999987 44433221
Q ss_pred eeeeecC-CcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccccCCchH
Q psy7748 125 VCIHYSQ-SKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFRGLPC 186 (232)
Q Consensus 125 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i~~~~~ 186 (232)
....... ..+...++|.+....+.+.... .|..++.|+|+++++++...+|.
T Consensus 89 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~----------~E~~~~~W~~~~el~~l~~~~p~ 141 (153)
T 3eds_A 89 RYTYSNGDEVEYIVVVFECEVTSGELRSID----------GESLKLQYFSLSEKPPLALPYPD 141 (153)
T ss_dssp EEECTTSCEEEEEEEEEEEEEEEECCC-----------------CEEEECGGGCCCBSSCCCG
T ss_pred eeecCCCCeEEEEEEEEEEEecCCccccCC----------CcEEEEEEECHHHCchhcccCcc
Confidence 1111111 1244677788876655443322 57889999999999998766664
No 14
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.80 E-value=9.9e-19 Score=130.83 Aligned_cols=113 Identities=18% Similarity=0.158 Sum_probs=77.8
Q ss_pred cceEEEEEEecCCceEEEEeccCcEEEEEEeeC--CeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceee-eceeee
Q psy7748 51 YHASHCMIFAYNDDKIFATYTARANVLMQMRFD--GYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVK-DSDLVC 126 (232)
Q Consensus 51 ~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~~--g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~-~~~~~~ 126 (232)
..++++++++.+++ ++++|+++|.. |.|.||||++++||++++||+||++||||+.+. ..+. ......
T Consensus 3 ~~~~~~vi~~~~~~--------~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~ 74 (138)
T 1ktg_A 3 VKAAGLVIYRKLAG--------KIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETL 74 (138)
T ss_dssp EEEEEEEEEEEETT--------EEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEE
T ss_pred eEEEEEEEEEecCC--------CcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceE
Confidence 35677777775321 24567777743 599999999999999999999999999999776 4333 111122
Q ss_pred eeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 127 IHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.+.....+...++|.+.......... +.|..++.|+|++++.++.
T Consensus 75 ~~~~~~~~~~~~~f~~~~~~~~~~~~----------~~e~~~~~W~~~~el~~~~ 119 (138)
T 1ktg_A 75 FYEAKGKPKSVKYWLAKLNNPDDVQL----------SHEHQNWKWCELEDAIKIA 119 (138)
T ss_dssp EEEETTEEEEEEEEEEEECSCCCCCC----------CTTEEEEEEECHHHHHHHH
T ss_pred EEEeCCCceEEEEEEEEecCCcccCC----------CchhcEeEeccHHHHHHhh
Confidence 22222346777888887764321111 2488899999999999864
No 15
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.80 E-value=5.4e-19 Score=135.77 Aligned_cols=124 Identities=15% Similarity=0.100 Sum_probs=79.5
Q ss_pred cccCCccccccc-CCccceEEEEEEecCCceEEEEeccCcEEEEEEee----CCeeecceeecCCCCCHHHHHhHHHHHh
Q psy7748 36 ELTQSDLKDDKY-KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRF----DGYIGFPGGLVDAGESPLEALNRELNEE 110 (232)
Q Consensus 36 ~~~~~~~~~~~~-~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~----~g~w~lPgG~ve~gEs~~~aa~REl~EE 110 (232)
.++++....+.. ...+.++++++++ + ++||+++|. +|.|+||||++++||++.+||+||++||
T Consensus 13 ~~~~~~p~~m~~~~~~~~~v~~vi~~-~-----------~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EE 80 (157)
T 4dyw_A 13 EAQTQGPGSMQHTEQPRVGCGAAIVR-D-----------GRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEE 80 (157)
T ss_dssp -------------CCCEEEEEEEEEE-T-----------TEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHH
T ss_pred eccCCCCCCCCCCCCceeEEEEEEEE-C-----------CEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHH
Confidence 344444444444 4456667777777 3 256777763 5899999999999999999999999999
Q ss_pred hCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 111 INLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 111 tGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
||+.+. ..++...... ......+...++|.+....+.+... .+.|..++.|++++++.+.+
T Consensus 81 tGl~~~~~~~~~~~~~~-~~~~~~~~~~~~f~~~~~~~~~~~~---------~~~E~~~~~W~~~~el~~~l 142 (157)
T 4dyw_A 81 LGIALERATLLCVVDHI-DAANGEHWVAPVYLAHAFSGEPRVV---------EPDRHEALGWFALDDLPQPL 142 (157)
T ss_dssp HSCEEESCEEEEEEEEE-ETTTTEEEEEEEEEESEEESCCCCS---------CTTTEEEEEEEETTSCCSSB
T ss_pred HCcccccCcEEEEEEee-ccCCCcEEEEEEEEEEEcCCCcccC---------CCCcEeEEEEECHHHccccc
Confidence 999987 4444332222 2123446677778876654433221 12478899999999999865
No 16
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.80 E-value=3e-19 Score=132.94 Aligned_cols=108 Identities=17% Similarity=0.185 Sum_probs=77.3
Q ss_pred cceEEEEEEecCCceEEEEeccCcEEEEEEeeCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeece-eeeee
Q psy7748 51 YHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSD-LVCIH 128 (232)
Q Consensus 51 ~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~-~~~~~ 128 (232)
..++++++++. +++|+++|..|.|+||||++++|||+.+||.||++||||+.+. ...+... +.+..
T Consensus 4 ~~~~~~vi~~~------------~~vLl~~r~~~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~ 71 (134)
T 2pbt_A 4 EFSAGGVLFKD------------GEVLLIKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTL 71 (134)
T ss_dssp EEEEEEEEEET------------TEEEEEECTTSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEEC------------CEEEEEEeCCCcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeeeeeEEEEEeeC
Confidence 34667777763 2678888877999999999999999999999999999999987 4433332 22221
Q ss_pred ecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 129 YSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.....+...++|.+....+..... .|..++.|+|++++.+++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~e~~~~~W~~~~el~~~~ 113 (134)
T 2pbt_A 72 KGERIFKTVKYYLMKYKEGEPRPS-----------WEVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp TTEEEEEEEEEEEEEEEEECCCCC-----------TTSSEEEEEEHHHHHHHC
T ss_pred CCcEEEEEEEEEEEEecCCCcCCC-----------cceeEEEEEcHHHHHhhh
Confidence 111234566777777664433221 278899999999999875
No 17
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.79 E-value=7.3e-19 Score=142.30 Aligned_cols=134 Identities=14% Similarity=0.116 Sum_probs=75.0
Q ss_pred ccccccCCcccccccCCccceEEEEEEecCCceEEEEeccCcEEEEEEe---e---------------------------
Q psy7748 33 DFIELTQSDLKDDKYKSGYHASHCMIFAYNDDKIFATYTARANVLMQMR---F--------------------------- 82 (232)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R---~--------------------------- 82 (232)
..+..|+|....+.+.....++++++++.+.+.++ ++.|+| +
T Consensus 18 ~~~~~~~G~~~~~e~v~~~~aV~vl~~~~~~~~vl--------LvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (218)
T 3q91_A 18 LYFQSMNGAQKSWDFMKTHDSVTVLLFNSSRRSLV--------LVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPAL 89 (218)
T ss_dssp -----------------CCCEEEEEEEEGGGTEEE--------EEEEECHHHHHHHTC----------------------
T ss_pred EEEECCCCCEEEEEEEEcCCeEEEEEEECCCCEEE--------EEEcccccccccccccccccccccccccccccccccc
Confidence 46778899888888877788999999986433221 233445 2
Q ss_pred ----CCeeecceeecCC-CCCHHHHHhHHHHHhhCCCC--c-ceeeeceeeeeeecCCcEEEEEEEEEEeecCccccccc
Q psy7748 83 ----DGYIGFPGGLVDA-GESPLEALNRELNEEINLNP--K-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEK 154 (232)
Q Consensus 83 ----~g~w~lPgG~ve~-gEs~~~aa~REl~EEtGl~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (232)
++.|+||||++|+ |||+++||+||++||||+.+ . +..+...+..... ....+++|.+..........
T Consensus 90 ~~~~~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g~---~~~~~~~f~a~~~~~~~~~~-- 164 (218)
T 3q91_A 90 PGSAGVTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGL---TGSRQTMFYTEVTDAQRSGP-- 164 (218)
T ss_dssp ---CCEEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC------CCEEEEEEEEEECGGGBCC---
T ss_pred ccCCCeEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecCCCc---cceEEEEEEEEECCcccccC--
Confidence 4689999999999 99999999999999999998 4 4444433332222 23455667776543211000
Q ss_pred ccccccCCCccceeeEeeeCccccccc
Q psy7748 155 GALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 155 ~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.....+ +.|.+++.|+|++++.+++
T Consensus 165 -~~~~~d-~~E~~ev~wv~l~el~~~i 189 (218)
T 3q91_A 165 -GGGLVE-EGELIEVVHLPLEGAQAFA 189 (218)
T ss_dssp ----------CCEEEEEEEGGGHHHHH
T ss_pred -CCCCCC-CCcEEEEEEEEHHHHHHHH
Confidence 001112 2589999999999999875
No 18
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.79 E-value=2.2e-18 Score=130.81 Aligned_cols=112 Identities=17% Similarity=0.075 Sum_probs=76.5
Q ss_pred cceEEEEEEecCCceEEEEeccCcEEEEEEee-CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-c-eeeeceeeee
Q psy7748 51 YHASHCMIFAYNDDKIFATYTARANVLMQMRF-DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-Y-KVKDSDLVCI 127 (232)
Q Consensus 51 ~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~-~~~~~~~~~~ 127 (232)
+.++.++++...+ ..+++|+++|. +|.|+||||++++|||+.+||+||++||||+.+. . ..+...+...
T Consensus 5 ~~~v~vvi~~~~~--------~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 76 (149)
T 3son_A 5 PFQVLVIPFIKTE--------ANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIP 76 (149)
T ss_dssp CCEEEEEEEEECS--------SSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEE
T ss_pred ceEEEEEEEEecC--------CCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeeccc
Confidence 3456666664321 23567888875 4899999999999999999999999999999987 3 1222222111
Q ss_pred ee----cCCcEEEEEEEEEEeec--CcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 128 HY----SQSKKIILHFYALQVEK--TDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 128 ~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.. ....+...++|.+.+.. +.+.. +.|..++.|+|++++.+++
T Consensus 77 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~-----------~~E~~~~~W~~~~el~~~~ 125 (149)
T 3son_A 77 NFHFSFNKPYVVPEYCFAIDLTSCSYQVTL-----------SLEHSELRWVSYESAIQLL 125 (149)
T ss_dssp GGGTCSSSCSEEEEEEEEEECTTTGGGCCC-----------CTTEEEEEEECHHHHHHHC
T ss_pred ceeeccCCceEeEEEEEEEEcCCCCCcccC-----------CCceeeEEEeCHHHHHHHh
Confidence 11 22345666788887763 22211 1478899999999999875
No 19
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.78 E-value=1.5e-18 Score=127.77 Aligned_cols=105 Identities=17% Similarity=0.086 Sum_probs=75.7
Q ss_pred ceEEEEEEecCCceEEEEeccCcEEEEEEeeCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeec
Q psy7748 52 HASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYS 130 (232)
Q Consensus 52 ~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~ 130 (232)
.++++++++.+ +++|+++|..|.|+||||++++||++.+||.||++||||+.+. ...+.... + ..
T Consensus 3 ~~~~~vi~~~~-----------~~vLl~~r~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~-~--~~ 68 (126)
T 1vcd_A 3 LGAGGVVFNAK-----------REVLLLRDRMGFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLPLYPTR-Y--VN 68 (126)
T ss_dssp EEEEEEEECTT-----------SCEEEEECTTSCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEE-E--EC
T ss_pred eEEEEEEEcCC-----------CEEEEEEECCCCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccEEeEEE-E--ec
Confidence 46777777765 3567788877999999999999999999999999999999987 44333221 1 11
Q ss_pred CCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 131 QSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
...+...++|.+....+... . +.|..++.|+|++++.+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~-~----------~~e~~~~~w~~~~el~~~~ 108 (126)
T 1vcd_A 69 PKGVEREVHWFLMRGEGAPR-L----------EEGMTGAGWFSPEEARALL 108 (126)
T ss_dssp TTSCEEEEEEEEEEEESCCC-C----------CTTCCEEEEECHHHHHHHB
T ss_pred CCceEEEEEEEEEEcCCCCC-C----------CcceeeeEEcCHHHHHHhh
Confidence 23345556677665443311 1 2478899999999998865
No 20
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.78 E-value=4.7e-18 Score=127.54 Aligned_cols=111 Identities=17% Similarity=0.189 Sum_probs=76.0
Q ss_pred CccceEEEEEEecCCceEEEEeccCcE--EEEEEee--CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeece
Q psy7748 49 SGYHASHCMIFAYNDDKIFATYTARAN--VLMQMRF--DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSD 123 (232)
Q Consensus 49 ~~~~a~~~vi~~~~~~~v~~~~~~~~~--vLl~~R~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~ 123 (232)
....++++++++.+. ++. +|+++|. ++.|+||||++++|||+.+||+||++||||+.+. ..+....
T Consensus 7 ~p~~~v~~vi~~~~~---------~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~ 77 (139)
T 2yyh_A 7 TPLLATDVIIRLWDG---------ENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKLMGVY 77 (139)
T ss_dssp CCEEEEEEEEEEEET---------TEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_pred CCeEEEEEEEEEEcC---------CCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceEEEEE
Confidence 445667777776221 134 6777773 3569999999999999999999999999999987 4433322
Q ss_pred eeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccc--ccc
Q psy7748 124 LVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMG--DGF 181 (232)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~--~~i 181 (232)
.........+...++|.+.. .+.+.. +.|..++.|+|++++. .+.
T Consensus 78 -~~~~~~~~~~~~~~~f~~~~-~~~~~~-----------~~e~~~~~W~~~~el~~~~l~ 124 (139)
T 2yyh_A 78 -SDPERDPRAHVVSVVWIGDA-QGEPKA-----------GSDAKKVKVYRLEEIPLDKLV 124 (139)
T ss_dssp -CCTTSCTTSCEEEEEEEEEE-ESCCCC-----------CTTEEEEEEECTTSCCGGGBC
T ss_pred -CCCCcCCCceEEEEEEEEec-CCccCC-----------CCCcceEEEEEHHHCCHhhcC
Confidence 11111223466777888876 333221 2478899999999999 554
No 21
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.77 E-value=1.1e-18 Score=140.04 Aligned_cols=111 Identities=17% Similarity=0.189 Sum_probs=79.1
Q ss_pred CCccceEEEEEEecCCceEEEEeccCcEEEEEEee-CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceee
Q psy7748 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRF-DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLV 125 (232)
Q Consensus 48 ~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~ 125 (232)
...+.++++++++ + ++||+++|. +|.|+||||++++|||+.+||+||++||||+.+. ..++.....
T Consensus 65 ~~~~~~v~~vv~~-~-----------~~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~l~~~~~ 132 (205)
T 3q1p_A 65 QTPKVDIRAVVFQ-N-----------EKLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKLLAIFDK 132 (205)
T ss_dssp CCCEEEEEEEEEE-T-----------TEEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEH
T ss_pred CCCcceEEEEEEE-C-----------CEEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceEEEEEec
Confidence 4445667777776 3 256777775 7899999999999999999999999999999987 444433322
Q ss_pred eee--ecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 126 CIH--YSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 126 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
... .....+.+.++|.+....+.+.. +.|..++.|+|+++++++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~E~~~~~w~~~~el~~l~ 179 (205)
T 3q1p_A 133 EKHQPSPSATHVYKIFIGCEIIGGEKKT-----------SIETEEVEFFGENELPNLS 179 (205)
T ss_dssp HHHSCCCCSSCEEEEEEEEEEEEECCCC-----------CTTSCCEEEECTTSCCCBC
T ss_pred cccCCCCCCceEEEEEEEEEecCCccCC-----------CCcceEEEEEeHHHhhhcC
Confidence 111 12234677788888876544322 1488999999999999874
No 22
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.77 E-value=3.5e-18 Score=131.26 Aligned_cols=109 Identities=20% Similarity=0.124 Sum_probs=75.3
Q ss_pred cceEEEEEEecCCceEEEEeccCcEEEEEEe-eCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceee---
Q psy7748 51 YHASHCMIFAYNDDKIFATYTARANVLMQMR-FDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLV--- 125 (232)
Q Consensus 51 ~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R-~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~--- 125 (232)
+.++++++++ + ++||+.+| .+|.|+||||++++|||+.+||+||++||||+.+. ...+.....
T Consensus 6 ~~~v~~vi~~-~-----------~~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 73 (159)
T 3f6a_A 6 HFTVSVFIVC-K-----------DKVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSC 73 (159)
T ss_dssp CEEEEEEEEE-T-----------TEEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHH
T ss_pred eEEEEEEEEE-C-----------CEEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCCCceecccccccccccc
Confidence 4566677776 3 24566666 45899999999999999999999999999999987 443321100
Q ss_pred ---------------eeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 126 ---------------CIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 126 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
..........+.++|.+....+..... +.|..++.|+|++++.++.
T Consensus 74 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~----------~~E~~~~~W~~~~el~~~~ 134 (159)
T 3f6a_A 74 DLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSFETSPE----------IGESKILKWYSKEDLKNAH 134 (159)
T ss_dssp HHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCSCCCCC----------TTSCCCEEEECSSSSTTCS
T ss_pred cccccccccCccccccccCCCCceEEEEEEEEEeCCCCcCCC----------CCcccceEEeeHHHHhhCc
Confidence 000011223555778887765544332 2588899999999999874
No 23
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.77 E-value=2.7e-18 Score=131.32 Aligned_cols=111 Identities=18% Similarity=0.218 Sum_probs=77.5
Q ss_pred CCccceEEEEEEecCCceEEEEeccCcEEEEEEee----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeec
Q psy7748 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRF----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDS 122 (232)
Q Consensus 48 ~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~ 122 (232)
......+++++++.+ +++|+++|. +|.|+||||+++.||++++||+||++||||+.+. ..++..
T Consensus 17 ~~~~~~v~~~i~~~~-----------~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~ 85 (156)
T 3gg6_A 17 KNVCYVVLAVFLSEQ-----------DEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSV 85 (156)
T ss_dssp TTCEEEEEEECBCTT-----------SEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEE
T ss_pred CceEEEEEEEEEeCC-----------CEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeEEEE
Confidence 344455666666655 356777773 4899999999999999999999999999999987 444332
Q ss_pred eeeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccccC
Q psy7748 123 DLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFR 182 (232)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i~ 182 (232)
.. . ..+...++|.+....+...... ..+.|..++.|+|++++++++.
T Consensus 86 ~~-----~-~~~~~~~~f~~~~~~~~~~~~~-------~~~~E~~~~~W~~~~el~~~~~ 132 (156)
T 3gg6_A 86 EE-----R-GPSWVRFVFLARPTGGILKTSK-------EADAESLQAAWYPRTSLPTPLR 132 (156)
T ss_dssp EE-----S-STTEEEEEEEEEEEEECCCCGG-------GCSSSCSEEEEEETTSCCSSBS
T ss_pred Ec-----C-CCCEEEEEEEEEeeCCeeccCC-------CCCcceeeeEEEcHHHCccccc
Confidence 21 1 2234566777776544332211 1125888999999999999863
No 24
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.77 E-value=1.3e-18 Score=133.24 Aligned_cols=111 Identities=20% Similarity=0.273 Sum_probs=78.4
Q ss_pred CccceEEEEEEecCCceEEEEeccCcEEEEEEee--------CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-cee
Q psy7748 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMRF--------DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKV 119 (232)
Q Consensus 49 ~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~--------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~ 119 (232)
..+.++++++++.++ .+|+++|. +|.|+||||++++||++.+||+||++||||+.+. ...
T Consensus 11 ~~~~~~~~vi~~~~~-----------~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~ 79 (159)
T 1sjy_A 11 VELRAAGVVLLNERG-----------DILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKF 79 (159)
T ss_dssp CCEEEEEEEEBCTTC-----------CEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEE
T ss_pred eEEEeEEEEEEeCCC-----------CEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEE
Confidence 345667777776553 45666664 3799999999999999999999999999999987 444
Q ss_pred eeceeeeeeecCCcEEEEEEEEEEeecCc-ccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 120 KDSDLVCIHYSQSKKIILHFYALQVEKTD-VLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
+...... .....+...++|.+....+. +.. . .+.|..++.|+|++++.+++
T Consensus 80 l~~~~~~--~~~~~~~~~~~f~~~~~~~~~~~~--------~-~~~E~~~~~W~~~~el~~~~ 131 (159)
T 1sjy_A 80 LGAYLGR--FPDGVLILRHVWLAEPEPGQTLAP--------A-FTDEIAEASFVSREDFAQLY 131 (159)
T ss_dssp EEEEEEE--CTTSCEEEEEEEEEEECSSCCCCC--------C-CCSSEEEEEEECHHHHHHHH
T ss_pred EEEEecc--cCCCceEEEEEEEEEccCCCcccc--------C-CCCceeEEEEecHHHHHHhh
Confidence 4332221 11125677888888775443 221 0 12588999999999998864
No 25
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.77 E-value=7.6e-18 Score=128.51 Aligned_cols=107 Identities=21% Similarity=0.128 Sum_probs=76.9
Q ss_pred ccceEEEEEEecCCceEEEEeccCcEEEEEEee------CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeec
Q psy7748 50 GYHASHCMIFAYNDDKIFATYTARANVLMQMRF------DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDS 122 (232)
Q Consensus 50 ~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~ 122 (232)
.+.++++++++.++ .+|+++|. +|.|+||||++++||++.+||+||++||||+.+. ..++..
T Consensus 7 ~~~~v~~vi~~~~~-----------~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~ 75 (153)
T 3grn_A 7 YIISVYALIRNEKG-----------EFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQ 75 (153)
T ss_dssp EEEEEEEEEECTTC-----------CEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSEEEE
T ss_pred eEEEEEEEEEcCCC-----------cEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceEEEE
Confidence 45667777777553 45666663 3899999999999999999999999999999988 444333
Q ss_pred eeeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 123 DLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.. ..........++|.+....+.+.. +.|..++.|++++++.++.
T Consensus 76 ~~---~~~~~~~~~~~~~~~~~~~~~~~~-----------~~e~~~~~W~~~~el~~~~ 120 (153)
T 3grn_A 76 VN---FELTEKKVIAIVFDGGYVVADVKL-----------SYEHIEYSWVSLEKILGME 120 (153)
T ss_dssp EE---EECSSCEEEEEEEEEEECCCCCCC-----------CTTEEEEEEECHHHHTTCS
T ss_pred EE---EecCCceEEEEEEEEEecCCcEec-----------CCCcceEEEEEHHHhhhcc
Confidence 22 222234566777777665443322 1478899999999998863
No 26
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.76 E-value=2e-18 Score=130.85 Aligned_cols=110 Identities=19% Similarity=0.133 Sum_probs=70.0
Q ss_pred CccceEEEEEEecCCceEEEEeccCcEEEE-EEeeC---CeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeece
Q psy7748 49 SGYHASHCMIFAYNDDKIFATYTARANVLM-QMRFD---GYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSD 123 (232)
Q Consensus 49 ~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl-~~R~~---g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~ 123 (232)
+++.++++++++.++.+ +|+ ++|.+ +.|+||||++|+|||+++||+||++||||+.+. ...+...
T Consensus 3 ~~~~~v~vi~~~~~~~v----------LLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~l~~~ 72 (145)
T 2w4e_A 3 RGPRAVFILPVTAQGEA----------VLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVPLPGF 72 (145)
T ss_dssp CCCEEEEEEEEETTSEE----------EEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEECCCB
T ss_pred eeCCEEEEEEEcCCCEE----------EEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEEEecC
Confidence 34567888888766432 233 34433 489999999999999999999999999999987 5444333
Q ss_pred eeeeeecCCcEEEEEEEEEE-eecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 124 LVCIHYSQSKKIILHFYALQ-VEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
+... .......++|.+. ...+..... +.|..++.|+|++++.+++
T Consensus 73 ~~~~---~~~~~~~~~f~~~~~~~~~~~~~----------~~E~~~~~w~~~~el~~~~ 118 (145)
T 2w4e_A 73 YPQP---SISGVVFYPLLALGVTLGAAQLE----------DTETIERVVLPLAEVYRML 118 (145)
T ss_dssp BSCT---TTCCCEEEEEEEEEEEEC------------------CEEEEEEEHHHHHHHH
T ss_pred cCCC---CccCceEEEEEEEecccCCCCCC----------CCCeEEEEEEeHHHHHHHH
Confidence 2211 1122344555554 322211111 2588999999999999874
No 27
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.76 E-value=2.8e-18 Score=137.70 Aligned_cols=97 Identities=16% Similarity=0.201 Sum_probs=71.0
Q ss_pred cEEEEEEeeCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeee--eeecCCcEEEEEEEEEEeecCccc
Q psy7748 74 ANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVC--IHYSQSKKIILHFYALQVEKTDVL 150 (232)
Q Consensus 74 ~~vLl~~R~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 150 (232)
++||+++|..|.|+||||++++|||+.+||+||++||||+.+. ..++...... .......+.+.++|.+....+.+.
T Consensus 81 ~~vLLvrr~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (206)
T 3o8s_A 81 DKILLVQENDGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDKHKNNPAKSAHRVTKVFILCRLLGGEFQ 160 (206)
T ss_dssp TEEEEEECTTSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEEEHHHHCC-----CEEEEEEEEEEEEECCC
T ss_pred CEEEEEEecCCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeEEEEEeccccCCCCCCceEEEEEEEEEecCCeec
Confidence 3678888888999999999999999999999999999999987 4444332211 111112356778888887654432
Q ss_pred ccccccccccCCCccceeeEeeeCccccccc
Q psy7748 151 EIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 151 ~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
. +.|..++.|+|+++++++.
T Consensus 161 ~-----------~~E~~~~~w~~~~el~~l~ 180 (206)
T 3o8s_A 161 P-----------NSETVASGFFSLDDLPPLY 180 (206)
T ss_dssp C-----------CSSCSEEEEECTTSCCCBC
T ss_pred C-----------CCCceEEEEEeHHHhhhcc
Confidence 2 1478899999999999874
No 28
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.76 E-value=1.9e-17 Score=131.01 Aligned_cols=101 Identities=17% Similarity=0.185 Sum_probs=72.7
Q ss_pred ccceEEEEEEecCCceEEEEeccCcEEEEEEee----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeecee
Q psy7748 50 GYHASHCMIFAYNDDKIFATYTARANVLMQMRF----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDL 124 (232)
Q Consensus 50 ~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~ 124 (232)
.+.++++++++ + +.||+++|. .|.|+||||++++|||+++||+||++||||+.+. ..+... +
T Consensus 39 ~~~~v~~ii~~-~-----------~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~-~ 105 (189)
T 3cng_A 39 PKVIVGCIPEW-E-----------NKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIRELYAV-Y 105 (189)
T ss_dssp CEEEEEEEEEE-T-----------TEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEE-E
T ss_pred CceEEEEEEEe-C-----------CEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccceeEEE-E
Confidence 34466666665 3 256777773 5799999999999999999999999999999987 433322 2
Q ss_pred eeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccc
Q psy7748 125 VCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMG 178 (232)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~ 178 (232)
.+. ..+...++|.+....+.+.. +.|..++.|++++++.
T Consensus 106 ~~~----~~~~~~~~f~~~~~~~~~~~-----------~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 106 SLP----HISQVYMLFRAKLLDLDFFP-----------GIESLEVRLFGEQEIP 144 (189)
T ss_dssp EEG----GGTEEEEEEEEEECCSCCCC-----------CTTEEEEEEECTTTCC
T ss_pred ecC----CCcEEEEEEEEEeCCCccCC-----------CccceeEEEECHHHcC
Confidence 221 22466777887765443221 2478899999999998
No 29
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.75 E-value=7.5e-18 Score=127.37 Aligned_cols=111 Identities=14% Similarity=0.010 Sum_probs=76.5
Q ss_pred ccceEEEEEEecCCceEEEEeccCcEEEEEEeeCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeee
Q psy7748 50 GYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIH 128 (232)
Q Consensus 50 ~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~ 128 (232)
.+.++++++++.+. +.+|+++|.+|.|.||||++++||++.+||+||++||||+.+. ...+........
T Consensus 17 ~~~~~~~vi~~~~~----------~~vLl~~r~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~ 86 (148)
T 2azw_A 17 TRYAAYIIVSKPEN----------NTMVLVQAPNGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCYLGEADEYFY 86 (148)
T ss_dssp ECCEEEEECEEGGG----------TEEEEEECTTSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEE
T ss_pred eeeEEEEEEECCCC----------CeEEEEEcCCCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeEEEEEEEEEc
Confidence 34567777777521 4678888878999999999999999999999999999999987 443333211111
Q ss_pred e-cCC--cEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 129 Y-SQS--KKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 129 ~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
. ... .+...++|.+......... ..|..++.|+|++++.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~e~~~~~W~~~~el~~~~ 131 (148)
T 2azw_A 87 SNHRQTAYYNPGYFYVANTWRQLSEP-----------LERTNTLHWVAPEEAVRLL 131 (148)
T ss_dssp ETTTTEEEEEEEEEEEEEEEEECSSC-----------C-CCSEEEEECHHHHHHHB
T ss_pred CCCCCcceEEEEEEEEEEcCcCCcCC-----------CCceeeEEEeeHHHHHhhh
Confidence 1 111 2445677777665332211 1366799999999999875
No 30
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.75 E-value=1.6e-17 Score=135.17 Aligned_cols=114 Identities=19% Similarity=0.221 Sum_probs=78.7
Q ss_pred CccceEEEEEEecCCceEEEEeccCcEEEEEEee----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeece
Q psy7748 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMRF----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSD 123 (232)
Q Consensus 49 ~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~ 123 (232)
....+++++|+..++ .+++||+.+|. +|.|++|||++++|||+++||+||++||||+.+. ...+...
T Consensus 11 ~p~v~v~~vi~~~~~--------~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~l~~~ 82 (226)
T 2fb1_A 11 TFYLGIDCIIFGFNE--------GEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQVGAF 82 (226)
T ss_dssp CEEEEEEEEEEEEET--------TEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEEEEEE
T ss_pred CCeEEEEEEEEEEeC--------CCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEEEEEe
Confidence 345667777774221 23567888884 4899999999999999999999999999999987 4443332
Q ss_pred eeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 124 LVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.. .......+.+.++|.+.+..+...... .|..++.|+|+++++++.
T Consensus 83 ~~-~~r~~~~~~v~~~y~a~~~~~~~~~~~----------~e~~~~~W~~~~el~~l~ 129 (226)
T 2fb1_A 83 GA-IDRDPGERVVSIAYYALININEYDREL----------VQKHNAYWVNINELPALI 129 (226)
T ss_dssp CC-TTSSSSSCEEEEEEEEECCTTSSCHHH----------HHHTTEEEEETTSCCCBS
T ss_pred CC-CCcCCCceEEEEEEEEEecCcccccCC----------ccccceEEEEHHHhhhcc
Confidence 21 111223356666777776544322111 478899999999999865
No 31
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.75 E-value=1.6e-17 Score=126.61 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=66.0
Q ss_pred EEEEEEe---eCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCccc
Q psy7748 75 NVLMQMR---FDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVL 150 (232)
Q Consensus 75 ~vLl~~R---~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (232)
++|+++| .+|.|.||||++++|||+.+||+||++||||+.+. ..++.... +.. ........++|.+........
T Consensus 17 ~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~-~~~-~~~~~~~~~~f~~~~~~~~~~ 94 (153)
T 3shd_A 17 KFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHFIRMHQ-WIA-PDKTPFLRFLFAIELEQICPT 94 (153)
T ss_dssp EEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEEEEEEE-ECC-TTSCCEEEEEEEEECSSCCCC
T ss_pred EEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcEEEEEE-Eec-CCCceEEEEEEEEEccccCcC
Confidence 5677776 34689999999999999999999999999999988 44443321 111 123456667888876644211
Q ss_pred ccccccccccCCCccceeeEeeeCccc
Q psy7748 151 EIEKGALTSHDYGVEVLGTVRVPLYTM 177 (232)
Q Consensus 151 ~~~~~~~~~~~~~~E~~~~~wvpl~el 177 (232)
.. .+.|..++.|+|++++
T Consensus 95 ~~---------~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 95 QP---------HDSDIDCCRWVSAEEI 112 (153)
T ss_dssp CC---------CSTTCCEEEEECHHHH
T ss_pred CC---------CcccceeeEEecHHHh
Confidence 11 1257889999999999
No 32
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.75 E-value=7.8e-18 Score=128.50 Aligned_cols=109 Identities=16% Similarity=0.099 Sum_probs=74.6
Q ss_pred cceEEEEEEecCCceEEEEeccCcEEEEEEeeCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeece-eeeee
Q psy7748 51 YHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSD-LVCIH 128 (232)
Q Consensus 51 ~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~-~~~~~ 128 (232)
+.++++++++. +++|+++| +|.|.||||++++||++.+||+||++||||+.+. ..+.... +.+..
T Consensus 19 ~~~~~~ii~~~------------~~vLl~~r-~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~ 85 (154)
T 2pqv_A 19 GVRATALIVQN------------HKLLVTKD-KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQLAFVVENRFEV 85 (154)
T ss_dssp EEEEEECCEET------------TEEEEEEE-TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEE
T ss_pred eEEEEEEEEEC------------CEEEEEec-CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceEEEEEeeeecC
Confidence 45566666552 36788888 9999999999999999999999999999999987 4433222 11211
Q ss_pred ecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 129 YSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
.....+...++|.+.......... ..+.|..++.|+|++++.++
T Consensus 86 ~~~~~~~~~~~f~~~~~~~~~~~~--------~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 86 DGVSYHNIEFHYLVDLLEDAPLTM--------QEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp TTEEEEEEEEEEEEEESSCCCSEE--------EETTEEEEEEEEEGGGGGGS
T ss_pred CCCcceEEEEEEEEEecCCCCccc--------CCCCceeeEEEeEHHHHhhc
Confidence 111124456678877654432110 11247889999999999986
No 33
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.75 E-value=2.7e-17 Score=123.61 Aligned_cols=92 Identities=24% Similarity=0.174 Sum_probs=67.8
Q ss_pred EEEEEEe-------eCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeec
Q psy7748 75 NVLMQMR-------FDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEK 146 (232)
Q Consensus 75 ~vLl~~R-------~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
.+|+++| ++|.|+||||++++||++.+||.||++||||+.+. ...+.... ......+...++|.+....
T Consensus 18 ~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~~~---~~~~~~~~~~~~f~~~~~~ 94 (140)
T 3gwy_A 18 KYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVH---HTYPDFEITMHAFLCHPVG 94 (140)
T ss_dssp EEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEE---CCCSSCCEEEEEEEEEECC
T ss_pred EEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceEEEEEE---EEeCCceEEEEEEEEEecC
Confidence 5677777 34789999999999999999999999999999987 44333221 2222346677888887765
Q ss_pred CcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 147 TDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
+.+.. .|..++.|++++++.++.
T Consensus 95 ~~~~~------------~E~~~~~W~~~~el~~~~ 117 (140)
T 3gwy_A 95 QRYVL------------KEHIAAQWLSTREMAILD 117 (140)
T ss_dssp SCCCC------------CSSCEEEEECHHHHTTSC
T ss_pred Ccccc------------cccceeEeccHHHHhhCC
Confidence 43221 377899999999999873
No 34
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.75 E-value=7.7e-17 Score=124.75 Aligned_cols=117 Identities=21% Similarity=0.176 Sum_probs=78.5
Q ss_pred CccceEEEEEEecCCceEEEEeccCcEEEEEEee-CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeecee--
Q psy7748 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMRF-DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDL-- 124 (232)
Q Consensus 49 ~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~-- 124 (232)
.++.++++++++.+ +.+|+++|. +|.|.+|||++++|||+.+||.||++||||+.+. ...+....
T Consensus 6 ~~~~~v~~~i~~~~-----------~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~ 74 (164)
T 2kdv_A 6 GYRPNVGIVICNRQ-----------GQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNW 74 (164)
T ss_dssp SEEEEEEEEEECTT-----------SEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSC
T ss_pred CCCcEEEEEEEccC-----------CEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEEEEEecce
Confidence 45778888888765 346677775 5899999999999999999999999999999987 44333221
Q ss_pred -eeeeec---------CCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 125 -VCIHYS---------QSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 125 -~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.+.... .......++|.+.+....... . .. ...+.|+.++.|++++++.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-~---l~-~~~~~E~~~~~W~~~~e~~~~l 136 (164)
T 2kdv_A 75 LRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEI-N---MQ-TSSTPEFDGWRWVSYWYPVRQV 136 (164)
T ss_dssp EEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGC-C---SC-SSSSCSEEEEEEEETTTGGGGS
T ss_pred eEEecCcceeeeccCcccccceeEEEEEEecCCcccc-c---cC-CCCCchhceEEEecHHHhhhhh
Confidence 111111 012345677888765432110 0 00 0112488999999999987765
No 35
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.74 E-value=1.6e-17 Score=129.98 Aligned_cols=110 Identities=16% Similarity=0.143 Sum_probs=77.1
Q ss_pred CCccceEEEEEEecCCceEEEEeccCcEEEEEEee------CCeeec-ceeecCCCCCHHHHHhHHHHHhhCCCCc-cee
Q psy7748 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRF------DGYIGF-PGGLVDAGESPLEALNRELNEEINLNPK-YKV 119 (232)
Q Consensus 48 ~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~------~g~w~l-PgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~ 119 (232)
.-.+.++++++++.++ .+|+++|. +|.|+| |||++++||++.+||+||++||||+.+. ...
T Consensus 34 ~~~~~~~~v~i~~~~~-----------~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~ 102 (180)
T 2fkb_A 34 CLRHRATYIVVHDGMG-----------KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAE 102 (180)
T ss_dssp TCCEEEEEEEEECSSS-----------CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEE
T ss_pred CceeeEEEEEEECCCC-----------EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEE
Confidence 3345567777776553 46777773 578999 9999999999999999999999999876 443
Q ss_pred eeceeeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccccC
Q psy7748 120 KDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFR 182 (232)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i~ 182 (232)
+.... ......+...++|.+... +..... +.|..++.|+|++++.+++.
T Consensus 103 l~~~~---~~~~~~~~~~~~f~~~~~-~~~~~~----------~~E~~~~~W~~~~el~~~~~ 151 (180)
T 2fkb_A 103 HGQFY---FEDKNCRVWGALFSCVSH-GPFALQ----------EDEVSEVCWLTPEEITARCD 151 (180)
T ss_dssp EEEEE---EEETTEEEEEEEEEEECC-CCCCCC----------TTTEEEEEEECHHHHHTTGG
T ss_pred EEEEE---ecCCCceEEEEEEEEecC-CCcCCC----------hhHhheEEEecHHHHHHHHH
Confidence 33222 122234566677777632 222111 25889999999999998753
No 36
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.74 E-value=6e-18 Score=129.66 Aligned_cols=110 Identities=14% Similarity=0.081 Sum_probs=75.4
Q ss_pred ccceEEEEEEecCCceEEEEeccCcEEEEEEee----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc---ceeeec
Q psy7748 50 GYHASHCMIFAYNDDKIFATYTARANVLMQMRF----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK---YKVKDS 122 (232)
Q Consensus 50 ~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~---~~~~~~ 122 (232)
.+.++++++++.+ +.+|+++|. +|.|+||||++++||++.+||+||++||||+.+. ...+..
T Consensus 17 ~~~~v~~vi~~~~-----------~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~ 85 (160)
T 1rya_A 17 PLVSLDFIVENSR-----------GEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGV 85 (160)
T ss_dssp CEEEEEEEEECTT-----------SCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEE
T ss_pred cEEEEEEEEEcCC-----------CEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceEEEE
Confidence 3457777777654 346677773 4899999999999999999999999999999963 333222
Q ss_pred e-eeeeee----cCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 123 D-LVCIHY----SQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 123 ~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
. +.+... ....+...++|.+....+.+... ..|..++.|++++++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~----------~~e~~~~~W~~~~el~~~ 138 (160)
T 1rya_A 86 WQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLP----------DEQHDDYRWLTSDALLAS 138 (160)
T ss_dssp EEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCC----------SSSEEEEEEECHHHHHHC
T ss_pred EeEEEcccccCCCcCcEEEEEEEEEEcCccccccC----------CCccceEEEecHHHHhhc
Confidence 2 111111 01226677888887654332211 247889999999999874
No 37
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.74 E-value=2.7e-17 Score=123.83 Aligned_cols=94 Identities=24% Similarity=0.340 Sum_probs=69.0
Q ss_pred cEEEEEEee-----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecC
Q psy7748 74 ANVLMQMRF-----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKT 147 (232)
Q Consensus 74 ~~vLl~~R~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+++|+++|. +|.|+||||+++.||++.+||.||++||||+.+. ..+.... .........+...++|.+....+
T Consensus 20 ~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 98 (144)
T 3r03_A 20 GRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLA-FASHSYDTFHLLMPLYACRSWRG 98 (144)
T ss_dssp SCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEE-EEEEECSSSEEEEEEEEECCCBS
T ss_pred CEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEE-eeeccCCCeEEEEEEEEEEecCC
Confidence 356777773 3799999999999999999999999999999987 4322221 12222334567778888876544
Q ss_pred cccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 148 DVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 148 ~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
.+. ..|..++.|++++++.++
T Consensus 99 ~~~------------~~e~~~~~W~~~~el~~~ 119 (144)
T 3r03_A 99 RAT------------AREGQTLAWVRAERLREY 119 (144)
T ss_dssp CCC------------CCSSCEEEEECGGGGGGS
T ss_pred ccC------------CCCcceEEEEeHHHhccC
Confidence 322 136778999999999986
No 38
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.74 E-value=3.6e-17 Score=125.38 Aligned_cols=108 Identities=23% Similarity=0.313 Sum_probs=75.2
Q ss_pred CccceEEEEEEecCCceEEEEeccCcEEEEEEee-----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeec
Q psy7748 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMRF-----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDS 122 (232)
Q Consensus 49 ~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~ 122 (232)
.....+++++++.+ +.+|+++|. +|.|+||||++++||++.+||.||++||||+.+. ..+...
T Consensus 27 ~~~~~~~~~i~~~~-----------~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~ 95 (158)
T 3hhj_A 27 SLLIVVACALLDQD-----------NRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPL 95 (158)
T ss_dssp CEEEEEEEEEBCTT-----------SEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEE
T ss_pred ceEEEEEEEEEeCC-----------CEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEE
Confidence 33445555555544 357788774 3799999999999999999999999999999987 432222
Q ss_pred eeeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 123 DLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
.. ........+...++|.+....+.+. ..|..++.|++++++.++
T Consensus 96 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~------------~~e~~~~~W~~~~el~~~ 140 (158)
T 3hhj_A 96 TF-ASHGYETFHLLMPLYFCSHYKGVAQ------------GREGQNLKWIFINDLDKY 140 (158)
T ss_dssp EE-EEEECSSCEEEEEEEEESCCBSCCC------------CTTSCEEEEEEGGGGGGS
T ss_pred EE-EeeccCCcEEEEEEEEEEECCCccC------------CccccceEEEcHHHHhhC
Confidence 11 1122234467777888766543221 136778999999999986
No 39
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.74 E-value=4.2e-17 Score=127.64 Aligned_cols=93 Identities=19% Similarity=0.200 Sum_probs=67.1
Q ss_pred EEEEEEee----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCcc
Q psy7748 75 NVLMQMRF----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDV 149 (232)
Q Consensus 75 ~vLl~~R~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (232)
++|+++|. +|.|+||||++++||++++||+||++||||+.+. ...+..... ...........++|.+....+.+
T Consensus 37 ~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~-~~~~~~~~~~~~~f~~~~~~~~~ 115 (176)
T 3q93_A 37 RVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVF-EFVGEPELMDVHVFCTDSIQGTP 115 (176)
T ss_dssp EEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEEEEEEEE-EETTCSCEEEEEEEEESCEESCC
T ss_pred EEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEEEEEEEE-EcCCCCcEEEEEEEEEECCCCCc
Confidence 56666663 4899999999999999999999999999999987 544433322 22222346667788876544432
Q ss_pred cccccccccccCCCccceeeEeeeCcccccc
Q psy7748 150 LEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
.. .|..++.|+++++++++
T Consensus 116 ~~------------~e~~~~~W~~~~el~~~ 134 (176)
T 3q93_A 116 VE------------SDEMRPCWFQLDQIPFK 134 (176)
T ss_dssp CC------------CSSEEEEEEETTCCCGG
T ss_pred CC------------CcceeeEEeeHHHcccc
Confidence 21 35667899999999976
No 40
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.73 E-value=3e-17 Score=126.72 Aligned_cols=95 Identities=19% Similarity=0.114 Sum_probs=63.2
Q ss_pred EEEEEEee------CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceee-----eeeecCC---cEEEEEE
Q psy7748 75 NVLMQMRF------DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLV-----CIHYSQS---KKIILHF 139 (232)
Q Consensus 75 ~vLl~~R~------~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~-----~~~~~~~---~~~~~~~ 139 (232)
.+|+++|. +|.|+||||++++||++++||+||++||||+.+. ..+....+. ..+.... ...+.++
T Consensus 40 ~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (165)
T 3oga_A 40 CYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKTYADGRQEEIYMIYLI 119 (165)
T ss_dssp EEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEEC--CCEEEEEEEEEE
T ss_pred EEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEecCCCCceeEEEEEEE
Confidence 56777663 3789999999999999999999999999999987 443322211 1111111 1233445
Q ss_pred EEEEeecCcccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 140 YALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
|.+....+.+.. +.|..++.|++++++.++
T Consensus 120 ~~~~~~~~~~~~-----------~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 120 FDCVSANRDICI-----------NDEFQDYAWVKPEELALY 149 (165)
T ss_dssp EEEEESCCCCCC-----------CTTEEEEEEECGGGGGGS
T ss_pred EEeeccCCCccC-----------CchheeeEEccHHHHhhC
Confidence 555544333221 147889999999999986
No 41
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.73 E-value=4.9e-17 Score=129.45 Aligned_cols=114 Identities=17% Similarity=0.183 Sum_probs=69.1
Q ss_pred CccceEEEEEEecCCceEEEEeccCcEEEEEEe-eCCeeecceeecCCCCCHHHHHhHHHHHhhCCC-Cc-ce--eeece
Q psy7748 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMR-FDGYIGFPGGLVDAGESPLEALNRELNEEINLN-PK-YK--VKDSD 123 (232)
Q Consensus 49 ~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R-~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~-~~-~~--~~~~~ 123 (232)
..+.+|++++++.++. +||+++| ..|.|.||||++|+|||+.+||+||++||||+. +. .. .....
T Consensus 43 ~~h~~~~~vv~~~~~~----------~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~ 112 (197)
T 3fcm_A 43 IAHLTSSAFAVNKERN----------KFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALD 112 (197)
T ss_dssp SEEEEEEEEEECTTSC----------EEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEE
T ss_pred CccEEEEEEEEECCCC----------EEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEE
Confidence 3456778888876642 4555555 568999999999999999999999999999998 43 11 11111
Q ss_pred ee-eeeec------CCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 124 LV-CIHYS------QSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 124 ~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
+. ..... .....+.++|.+....+.... . ...|..++.|+|++++.+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~E~~~~~W~~~~el~~~~ 168 (197)
T 3fcm_A 113 VLTVNGHIKRGKYVSSHLHLNLTYLIECSEDETLM--------L-KEDENSGVMWIPFNEISKYC 168 (197)
T ss_dssp EEEECCEEETTEEECCEEEEEEEEEEECCTTSCCC--------C-CC----CEEEEEGGGHHHHC
T ss_pred EeeecCccccCcccCCceeEEEEEEEEeCCCcccC--------C-CcccccceEEccHHHHHhhc
Confidence 11 11100 111122244555544332111 0 12588899999999999886
No 42
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.73 E-value=4.9e-17 Score=126.22 Aligned_cols=112 Identities=20% Similarity=0.177 Sum_probs=72.5
Q ss_pred CccceEEEEEEecCCceEEEEeccCcEEEEEEee--CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceee
Q psy7748 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMRF--DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLV 125 (232)
Q Consensus 49 ~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~ 125 (232)
..+..+++++++. +++|+.+|. +|.|+||||++++||++++||+||++||||+.+. ..++...
T Consensus 21 ~~~~~v~~ii~~~------------~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~-- 86 (171)
T 3id9_A 21 IMQVRVTGILIED------------EKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKKLLYVC-- 86 (171)
T ss_dssp -CEEEEEEEEEET------------TEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEE--
T ss_pred ceEEEEEEEEEEC------------CEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccceEEEEE--
Confidence 3455666666653 356777775 6899999999999999999999999999999987 4333222
Q ss_pred eeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 126 CIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
...........++|.+....+...... ...+ ..|..++.|+|++++.++
T Consensus 87 -~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~E~~~~~w~~~~el~~~ 135 (171)
T 3id9_A 87 -DKPDASPSLLHITFLLERIEGEITLPS----NEFD-HNPIHDVQMVPINELSYY 135 (171)
T ss_dssp -EETTSSSCEEEEEEEEEEC------------------CCCCCEEEEETGGGGGG
T ss_pred -cccCCCCcEEEEEEEEEEcCCcccCCc----cCCC-cCeeeeEEEEeHHHHhhC
Confidence 122223345566677766544433211 0111 247889999999999986
No 43
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.73 E-value=1.4e-17 Score=131.42 Aligned_cols=98 Identities=22% Similarity=0.150 Sum_probs=65.9
Q ss_pred cEEEEEEe-----------eCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEE
Q psy7748 74 ANVLMQMR-----------FDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYA 141 (232)
Q Consensus 74 ~~vLl~~R-----------~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
++||+++| ++|.|.||||++++|||+++||+||++||||+.+. ...+.... ........+...++|.
T Consensus 46 ~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 124 (187)
T 3i9x_A 46 LHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETSLTDIPLIPFGVFD-KPGRDPRGWIISRAFY 124 (187)
T ss_dssp EEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHCCCSCCCEEEEEEC-CTTSSTTSSEEEEEEE
T ss_pred CEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHCCCCcceEEEEEEc-CCccCCCCCEEEEEEE
Confidence 46788887 34799999999999999999999999999999987 54443322 2121222234445555
Q ss_pred EEeecCcccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 142 LQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
+.+......... .+.|..++.|+|++++.++
T Consensus 125 ~~~~~~~~~~~~--------~~~E~~~~~W~~~~el~~~ 155 (187)
T 3i9x_A 125 AIVPPEALEKRA--------AGDDAAEIGLFPMTEALEL 155 (187)
T ss_dssp EECCHHHHHHHH--------HSTTTTTEEEEEHHHHTTS
T ss_pred EEEcCcccCCcC--------CCCceeEEEEEeHHHcccC
Confidence 544322111000 0247788999999999975
No 44
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.73 E-value=4e-17 Score=123.41 Aligned_cols=110 Identities=17% Similarity=0.138 Sum_probs=76.1
Q ss_pred cceEEEEEEecCCceEEEEeccCcEEEEEEee--CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-c--eeeeceee
Q psy7748 51 YHASHCMIFAYNDDKIFATYTARANVLMQMRF--DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-Y--KVKDSDLV 125 (232)
Q Consensus 51 ~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~--~~~~~~~~ 125 (232)
+.++++++++.++ +.+|+.+|. +|.|.||||++++||++.+||+||++||||+.+. . .++.....
T Consensus 9 ~~~v~~~i~~~~~----------~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~ 78 (150)
T 2o1c_A 9 PVSILVVIYAQDT----------KRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRT 78 (150)
T ss_dssp SEEEEEEEEETTT----------CEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEE
T ss_pred ceEEEEEEEeCCC----------CEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeEEeeece
Confidence 3577778887542 245677774 5899999999999999999999999999999986 3 22222111
Q ss_pred ee----------eecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 126 CI----------HYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 126 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.. ......+...++|.+....+.... ..|..++.|+|++++.++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-----------~~E~~~~~W~~~~el~~~~ 133 (150)
T 2o1c_A 79 VEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIV-----------FTEHLAYKWLDAPAAAALT 133 (150)
T ss_dssp EEEECCGGGGGGBCTTCCEEEEEEEEEEESSCCCCC-----------CSSSSCEEEEEHHHHHHHC
T ss_pred eeeeeecccccccCCCCcceEEEEEEEEcCCCCCcC-----------hhHhhccEeecHHHHHhhh
Confidence 10 111123567788888765432211 1478899999999999864
No 45
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.72 E-value=2.9e-17 Score=126.22 Aligned_cols=122 Identities=15% Similarity=0.032 Sum_probs=77.2
Q ss_pred CCccceEEEEEEecCCceEEEEeccCcEEEEEEee--CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ce-eeec-
Q psy7748 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRF--DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YK-VKDS- 122 (232)
Q Consensus 48 ~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~-~~~~- 122 (232)
..++.++++++++.++ ++|+++|. +|.|++|||++++|||+++||+||++||||+.+. +. ....
T Consensus 11 ~~~~~~v~~~i~~~~~-----------~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~ 79 (165)
T 1f3y_A 11 EGYRRNVGICLMNNDK-----------KIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYW 79 (165)
T ss_dssp SSCCCEEEEEEECTTS-----------CEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSC
T ss_pred cceeeeEEEEEECCCC-----------cEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccc
Confidence 3467888888887653 45667773 5899999999999999999999999999999975 32 1111
Q ss_pred -eeeeeee---------c-CCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccccCC
Q psy7748 123 -DLVCIHY---------S-QSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFRG 183 (232)
Q Consensus 123 -~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i~~ 183 (232)
.+.+... . .......++|.+.+......... .. . ..+..|..++.|+|++++.+++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~-~~-~-~~~~~E~~~~~W~~~~el~~~~~~ 148 (165)
T 1f3y_A 80 LTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINL-LG-D-GSEKPEFGEWSWVTPEQLIDLTVE 148 (165)
T ss_dssp CBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCC-CC-C-SSSCCSEEEEEEECHHHHHHHBCG
T ss_pred eeeecCccccccccccccccccCceEEEEEEEecCCcccccc-cC-C-CCCCChhheeEEecHHHHHHHhhh
Confidence 1111100 0 00112445667666433211100 00 0 012358899999999999997643
No 46
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.72 E-value=2.4e-17 Score=131.53 Aligned_cols=116 Identities=15% Similarity=0.074 Sum_probs=73.1
Q ss_pred cCCccceEEEEEEecCCceEEEEeccCcEEEEEEe-e--CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeec
Q psy7748 47 YKSGYHASHCMIFAYNDDKIFATYTARANVLMQMR-F--DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDS 122 (232)
Q Consensus 47 ~~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R-~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~ 122 (232)
....+.++++++++.+++ .||+.+| . +|.|+||||++++||++++||+||++||||+.+. ..+...
T Consensus 22 ~~~~~v~v~~~v~~~~~~----------~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l~~~ 91 (199)
T 3h95_A 22 SMSHQVGVAGAVFDESTR----------KILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSI 91 (199)
T ss_dssp ----CCEEEEEEEETTTT----------EEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEEEEE
T ss_pred cCcccceEEEEEEeCCCC----------EEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccceEEEE
Confidence 356677787888876533 4555555 3 5899999999999999999999999999999987 444432
Q ss_pred eeeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 123 DLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
....... .......++|.+.+........ . .+.|..++.|+|++++.++.
T Consensus 92 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~-~~~E~~~~~W~~~~el~~~~ 141 (199)
T 3h95_A 92 RQQHTNP-GAFGKSDMYIICRLKPYSFTIN-------F-CQEECLRCEWMDLNDLAKTE 141 (199)
T ss_dssp EECC----------CEEEEEEEEESCCCCC-------C-CTTTEEEEEEEEHHHHHHCS
T ss_pred EeeecCC-CCceeEEEEEEEEEcCCCcccC-------C-CccceeeeEEEeHHHHhhhh
Confidence 2111111 1123344556665543321111 1 12589999999999999875
No 47
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.72 E-value=3.6e-17 Score=129.40 Aligned_cols=110 Identities=15% Similarity=0.064 Sum_probs=76.6
Q ss_pred ccceEEEEEEecCCceEEEEeccCcEEEEEEee------CCeeec-ceeecCCCCCHHHHHhHHHHHhhCCCCc-c-eee
Q psy7748 50 GYHASHCMIFAYNDDKIFATYTARANVLMQMRF------DGYIGF-PGGLVDAGESPLEALNRELNEEINLNPK-Y-KVK 120 (232)
Q Consensus 50 ~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~------~g~w~l-PgG~ve~gEs~~~aa~REl~EEtGl~~~-~-~~~ 120 (232)
.+.++++++++.+ +++|+++|. +|.|++ |||++++|||+++||+||++||||+.+. . ...
T Consensus 31 ~~~~v~~~i~~~~-----------g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~~ 99 (190)
T 1hzt_A 31 LHLAFSSWLFNAK-----------GQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIY 99 (190)
T ss_dssp CEECEEEEEECTT-----------CCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEEE
T ss_pred eEEEEEEEEEcCC-----------CEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhheee
Confidence 3457777777655 346777772 589999 9999999999999999999999999988 5 444
Q ss_pred eceeeeeeec-C-CcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 121 DSDLVCIHYS-Q-SKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 121 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.......... + ..+...++|.+... +.+... +.|..++.|+|++++.+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~----------~~E~~~~~W~~~~el~~~~ 151 (190)
T 1hzt_A 100 PDFRYRATDPSGIVENEVCPVFAARTT-SALQIN----------DDEVMDYQWCDLADVLHGI 151 (190)
T ss_dssp TTCEEEEECTTSCEEEEECCEEEEEBC-SCCCCC----------TTTEEEEEEECHHHHHHHH
T ss_pred eeEEEEeeCCCCCcceEEEEEEEEecC-CCCcCC----------ccceeeEEEecHHHHHHHH
Confidence 3332211111 1 12456677777654 222111 2488999999999999875
No 48
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.72 E-value=2.1e-17 Score=135.70 Aligned_cols=133 Identities=19% Similarity=0.171 Sum_probs=86.0
Q ss_pred cceEEEEEEecCCceEEEEeccCcEEEEEEee----CCeeecceeecCC--CCCHHHHHhHHHHHhhCCCCc-ceeeece
Q psy7748 51 YHASHCMIFAYNDDKIFATYTARANVLMQMRF----DGYIGFPGGLVDA--GESPLEALNRELNEEINLNPK-YKVKDSD 123 (232)
Q Consensus 51 ~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~----~g~w~lPgG~ve~--gEs~~~aa~REl~EEtGl~~~-~~~~~~~ 123 (232)
..++.++|+..+ +..++||+.+|. +|.|+||||++++ |||+++||+||++||||+.+. ...+..+
T Consensus 22 ~v~v~~vi~~~~--------~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~l~~~ 93 (240)
T 3gz5_A 22 LLTVDAVLFTYH--------DQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQLCTV 93 (240)
T ss_dssp EEEEEEEEEEEE--------TTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEEEEEE
T ss_pred ccEEEEEEEEEe--------CCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceeeEEEe
Confidence 345666665322 223577888873 4899999999999 999999999999999999987 4443322
Q ss_pred eeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccc-cCCchHHHHHHHHHHHHHHHHH
Q psy7748 124 LVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG-FRGLPCFLTHSFIGNAKHQLLA 202 (232)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~-i~~~~~~l~~~~i~~~~~~l~~ 202 (232)
.. .......+.+.++|.+.+......... .|..++.|+|++++++. +... ...++..+..++..
T Consensus 94 ~~-~~r~~~~~~~~~~y~a~~~~~~~~~~~----------~e~~~~~W~~~~el~~~~l~~d----h~~il~~a~~rlr~ 158 (240)
T 3gz5_A 94 GN-NSRDARGWSVTVCYTALMSYQACQIQI----------ASVSDVKWWPLADVLQMPLAFD----HLQLIEQARERLTQ 158 (240)
T ss_dssp EE-SSSSTTSCEEEEEEEEECCHHHHHHHH----------TTCTTEEEEEHHHHTTSCCSTT----HHHHHHHHHHHHHH
T ss_pred CC-CccCCCceEEEEEEEEEecccccCCCC----------CcccceEEecHHHcccCCcchh----HHHHHHHHHHHHHH
Confidence 22 222233456677777776544332211 46779999999999853 3222 34455555555555
Q ss_pred HHHh
Q psy7748 203 ALLK 206 (232)
Q Consensus 203 ~l~~ 206 (232)
.+..
T Consensus 159 kl~y 162 (240)
T 3gz5_A 159 KALY 162 (240)
T ss_dssp HHHH
T ss_pred hccc
Confidence 4443
No 49
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.72 E-value=7.2e-17 Score=127.67 Aligned_cols=94 Identities=22% Similarity=0.247 Sum_probs=66.3
Q ss_pred EEEEEEe-eCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCC---cEEEEEEEEEEeecCcc
Q psy7748 75 NVLMQMR-FDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQS---KKIILHFYALQVEKTDV 149 (232)
Q Consensus 75 ~vLl~~R-~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 149 (232)
+||+.+| .+|.|.+|||++++||++++||+||++||||+.+. ..+........ .... .+...++|.+....+.+
T Consensus 16 ~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~f~a~~~~~~~ 94 (188)
T 3fk9_A 16 QVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPELKGIFSMVI-FDEGKIVSEWMLFTFKATEHEGEM 94 (188)
T ss_dssp EEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEEEEE-EETTEEEEEEEEEEEEESCEESCC
T ss_pred EEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEEEEe-cCCCcceEEEEEEEEEEECCCCCC
Confidence 5666666 56899999999999999999999999999999987 44433332222 2222 12366777776554443
Q ss_pred cccccccccccCCCccceeeEeeeCcccccc
Q psy7748 150 LEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
... .|..++.|+++++++++
T Consensus 95 ~~~-----------~e~~~~~W~~~~el~~~ 114 (188)
T 3fk9_A 95 LKQ-----------SPEGKLEWKKKDEVLEL 114 (188)
T ss_dssp CSE-----------ETTEEEEEEEGGGGGGS
T ss_pred cCC-----------CCCEeEEEEEHHHhhhC
Confidence 222 24468999999999876
No 50
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.71 E-value=5.8e-17 Score=124.85 Aligned_cols=108 Identities=17% Similarity=0.126 Sum_probs=75.0
Q ss_pred cceEEEEEEecCCceEEEEeccCcEEEEEEee----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceee
Q psy7748 51 YHASHCMIFAYNDDKIFATYTARANVLMQMRF----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLV 125 (232)
Q Consensus 51 ~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~ 125 (232)
+.++++++++.+. ++||+++|. .|.|+||||++++||++.+||+||++||||+.+. ..++.....
T Consensus 10 ~~~v~~vi~~~~~----------~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~ 79 (161)
T 3exq_A 10 ELVTMVMVTDPET----------QRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCEW 79 (161)
T ss_dssp EEEEEEEEBCTTT----------CCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEEEEEEEE
T ss_pred eEEEEEEEEeCCC----------CEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcEEEEEec
Confidence 4455556555441 246677673 3678899999999999999999999999999987 544433322
Q ss_pred eeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 126 CIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
. ..........++|.+....+.+.. .|..++.|+|++++.++.
T Consensus 80 ~-~~~~~~~~~~~~~~~~~~~~~~~~------------~e~~~~~W~~~~el~~~~ 122 (161)
T 3exq_A 80 F-DDDRQHRKLGLLYRASNFTGTLKA------------SAEGQLSWLPITALTREN 122 (161)
T ss_dssp E-CSSCSSEEEEEEEEECCEESCCCG------------GGTTTEEEECGGGCCTTT
T ss_pred c-cCCCCeEEEEEEEEEeccCCccCC------------CccceEEEeeHHHhhhCc
Confidence 2 112344677778888765544321 356689999999999863
No 51
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.71 E-value=1.4e-16 Score=120.92 Aligned_cols=92 Identities=28% Similarity=0.428 Sum_probs=67.7
Q ss_pred cEEEEEEee-----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecC
Q psy7748 74 ANVLMQMRF-----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKT 147 (232)
Q Consensus 74 ~~vLl~~R~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+.+|+++|. +|.|+||||++++||++.+||.||++||||+.+. ..++.. ..+.....+...++|.+....+
T Consensus 33 ~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 109 (153)
T 3ees_A 33 GKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGELKLA---CTHSYGDVGILILFYEILYWKG 109 (153)
T ss_dssp TEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCEEEE---EEEEETTEEEEEEEEEECEEES
T ss_pred CEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCceEEE---EEEecCCCeEEEEEEEEEECCC
Confidence 357777773 3899999999999999999999999999999887 443332 1122223456667788776544
Q ss_pred cccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 148 DVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 148 ~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
.+. ..|..++.|++++++.++
T Consensus 110 ~~~------------~~e~~~~~W~~~~el~~~ 130 (153)
T 3ees_A 110 EPR------------AKHHMMLEWIHPEELKHR 130 (153)
T ss_dssp CCC------------CSSSSEEEEECGGGGGGS
T ss_pred CcC------------CCccceEEEecHHHhhhC
Confidence 321 146779999999999986
No 52
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.71 E-value=1.2e-16 Score=123.55 Aligned_cols=85 Identities=22% Similarity=0.157 Sum_probs=57.7
Q ss_pred EEEEEEeeCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCcccccc
Q psy7748 75 NVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIE 153 (232)
Q Consensus 75 ~vLl~~R~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (232)
.+|+.+|.+|.|.||||++++|||+.+||+||++||||+.+. ...+. .+.. . ....++|.+.+. +.+...
T Consensus 28 ~vLL~~r~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l~---~~~~--~--~~~~~~f~~~~~-~~~~~~- 98 (163)
T 3f13_A 28 GVLVTASRGGRYNLPGGKANRGELRSQALIREIREETGLRINSMLYLF---DHIT--P--FNAHKVYLCIAQ-GQPKPQ- 98 (163)
T ss_dssp EEEEEECC---BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEEEE---EEEC--S--SEEEEEEEEEC--CCCCCC-
T ss_pred EEEEEEECCCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEEEE---EEec--C--CeEEEEEEEEEC-CcCccC-
Confidence 467777778999999999999999999999999999999987 43332 1111 1 155566777643 332221
Q ss_pred cccccccCCCccceeeEeeeCcccc
Q psy7748 154 KGALTSHDYGVEVLGTVRVPLYTMG 178 (232)
Q Consensus 154 ~~~~~~~~~~~E~~~~~wvpl~el~ 178 (232)
.|..++.|++.+...
T Consensus 99 ----------~E~~~~~W~~~~~~~ 113 (163)
T 3f13_A 99 ----------NEIERIALVSSPDTD 113 (163)
T ss_dssp ----------TTCCEEEEESSTTCS
T ss_pred ----------CCceEEEEECccccc
Confidence 378899999955544
No 53
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.71 E-value=6e-17 Score=123.13 Aligned_cols=96 Identities=16% Similarity=0.106 Sum_probs=67.1
Q ss_pred EEEEEEee----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCcc
Q psy7748 75 NVLMQMRF----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDV 149 (232)
Q Consensus 75 ~vLl~~R~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (232)
++|+.+|. +|.|+||||++++||++.+||+||++||||+.+. ..++.... +.......+...++|.+.......
T Consensus 20 ~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~-~~~~~~~~~~~~~~f~~~~~~~~~ 98 (153)
T 2b0v_A 20 KYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYH-WTCASNGTTYLRFTFSGQVVSFDP 98 (153)
T ss_dssp EEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEEEEEEE-EEETTTTEEEEEEEEEEEEEEECT
T ss_pred EEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceEEEEEE-EeCCCCCcEEEEEEEEEEeCCCCC
Confidence 56777773 3589999999999999999999999999999987 44443321 111111335566777777654322
Q ss_pred cccccccccccCCCccceeeEeeeCcccccc
Q psy7748 150 LEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
... .+.|..++.|+|++++.++
T Consensus 99 ~~~---------~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 99 DRK---------LDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp TSC---------CCTTEEEEEEEEHHHHHHT
T ss_pred CCC---------CCCCeeeEEEecHHHHhhh
Confidence 110 1247889999999999985
No 54
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.71 E-value=2.8e-17 Score=124.18 Aligned_cols=124 Identities=15% Similarity=0.181 Sum_probs=74.7
Q ss_pred ceEEEEEEecCCceEEEEeccCcEEEEEEee-CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeee
Q psy7748 52 HASHCMIFAYNDDKIFATYTARANVLMQMRF-DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHY 129 (232)
Q Consensus 52 ~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~ 129 (232)
+++++++++.+. +++|+++|. +|.|.||||++++|||+.+||+||++||||+.+. .......+.. ..
T Consensus 5 ~~~~~~i~~~~~----------~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~-~~ 73 (146)
T 2jvb_A 5 PVRGAAIFNENL----------SKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYIDDNQFIER-NI 73 (146)
T ss_dssp CCEEEEEBCTTS----------SEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSCSSCEEEE-EE
T ss_pred EEEEEEEEeCCC----------CEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhccccccccc-cc
Confidence 455666666542 356677674 5899999999999999999999999999999987 3222222221 12
Q ss_pred cCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccccCCc--hHHHHHHHHHHH
Q psy7748 130 SQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFRGL--PCFLTHSFIGNA 196 (232)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i~~~--~~~l~~~~i~~~ 196 (232)
. . .. .++|.+....... .....+ +.|..++.|+|++++.+++... ..++...++...
T Consensus 74 ~-~-~~-~~~~~~~~~~~~~------~~~~~~-~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~l 132 (146)
T 2jvb_A 74 Q-G-KN-YKIFLISGVSEVF------NFKPQV-RNEIDKIEWFDFKKISKTMYKSNIKYYLINSMMRPL 132 (146)
T ss_dssp T-T-EE-EEEEEECCCCSSS------CCCCCC-SSSCCCEEEEEHHHHHTGGGCSSCCCHHHHHHHHHH
T ss_pred C-C-ce-EEEEEEEeccccc------cCCcCC-cchhheeEEeEHHHHHhhhcccchhhhhHHHHHHHH
Confidence 1 1 22 2333332211110 001111 2588999999999999975332 223444444433
No 55
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.70 E-value=1.9e-16 Score=120.81 Aligned_cols=110 Identities=16% Similarity=0.136 Sum_probs=73.0
Q ss_pred ccceEEEEEEecCCceEEEEeccCcEEEEEEeeCC---eeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceee
Q psy7748 50 GYHASHCMIFAYNDDKIFATYTARANVLMQMRFDG---YIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLV 125 (232)
Q Consensus 50 ~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~~g---~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~ 125 (232)
.+.++++++++.+... ..+|+++|..+ .|.||||++++||++.+||+||++||||+.+. ..++.....
T Consensus 7 ~~~~~~~ii~~~~~~~--------~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~ 78 (155)
T 2b06_A 7 TILTNICLIEDLETQR--------VVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKNW 78 (155)
T ss_dssp EEEEEEEEEEETTTTE--------EEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEEEEEEEE
T ss_pred cEEEEEEEEEECCCCe--------EEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccCCcEEEEEee
Confidence 4556777777644222 13677777331 28999999999999999999999999999987 444433222
Q ss_pred eeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 126 CIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
.. ....+...++|.+....+.+.. .|..++.|+|++++.++.
T Consensus 79 ~~--~~~~~~~~~~~~~~~~~~~~~~------------~e~~~~~W~~~~el~~~~ 120 (155)
T 2b06_A 79 PL--DTGGRYIVICYKATEFSGTLQS------------SEEGEVSWVQKDQIPNLN 120 (155)
T ss_dssp EC--TTSCEEEEEEEEECEEEECCCC------------BTTBEEEEEEGGGGGGSC
T ss_pred cc--CCCceEEEEEEEEEecCCCCCC------------CcceeeEEeeHHHhhhCC
Confidence 11 2234666777777654332211 367789999999999874
No 56
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.70 E-value=5.9e-17 Score=128.51 Aligned_cols=112 Identities=24% Similarity=0.280 Sum_probs=73.8
Q ss_pred CCccceEEEEEEecCCceEEEEeccCcEEEEEEe------eCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceee
Q psy7748 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMR------FDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVK 120 (232)
Q Consensus 48 ~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R------~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~ 120 (232)
+..++++++++++.++. ..+|+++| ++|.|+||||++++||++++||+||++||||+.+. ...+
T Consensus 31 ~~~~~~~~~v~i~~~~~---------~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~l 101 (194)
T 1nqz_A 31 PHYRRAAVLVALTREAD---------PRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLL 101 (194)
T ss_dssp --CEEEEEEEEEESSSS---------CBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEEE
T ss_pred CCCceEEEEEEEecCCC---------eEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEEE
Confidence 34567777777765531 14566665 35899999999999999999999999999999988 5444
Q ss_pred eceeeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccc-cc
Q psy7748 121 DSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTM-GD 179 (232)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el-~~ 179 (232)
........ ......++|.+.+..... .... .+.|..++.|+|++++ .+
T Consensus 102 ~~~~~~~~---~~~~~~~~f~~~~~~~~~-------~~~~-~~~E~~~~~W~~~~el~~~ 150 (194)
T 1nqz_A 102 GELDDVFT---PVGFHVTPVLGRIAPEAL-------DTLR-VTPEVAQIITPTLAELRAV 150 (194)
T ss_dssp EECCCEEE---TTTEEEEEEEEEECGGGG-------GGCC-CCTTEEEEECCBHHHHHHS
T ss_pred EEccCccC---CCCeEEEEEEEEecCCcc-------ccCC-CccceeEEEEEEHHHhccC
Confidence 43332222 123455667776542210 0001 1258899999999999 55
No 57
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.70 E-value=3.8e-16 Score=130.06 Aligned_cols=93 Identities=17% Similarity=0.171 Sum_probs=69.2
Q ss_pred cEEEEEEee---CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCcc
Q psy7748 74 ANVLMQMRF---DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDV 149 (232)
Q Consensus 74 ~~vLl~~R~---~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (232)
+++|+.+|. +|.|++|||++|+|||+++||+||++||||+.+. ...+.... .. ..+..+++|.+.+..+++
T Consensus 151 ~~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~~~---~~--~~~~~~~~f~a~~~~~~~ 225 (269)
T 1vk6_A 151 DSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQP---WP--FPQSLMTAFMAEYDSGDI 225 (269)
T ss_dssp TEEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEE---EE--TTEEEEEEEEEEEEECCC
T ss_pred CEEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEEEEEEe---cC--CCCEEEEEEEEEECCCCc
Confidence 467777773 4899999999999999999999999999999987 44333221 11 224567778877665443
Q ss_pred cccccccccccCCCccceeeEeeeCccccccc
Q psy7748 150 LEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 150 ~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
... +.|..++.|+++++++.+.
T Consensus 226 ~~~----------~~E~~~~~W~~~~el~~l~ 247 (269)
T 1vk6_A 226 VID----------PKELLEANWYRYDDLPLLP 247 (269)
T ss_dssp CCC----------TTTEEEEEEEETTSCCSCC
T ss_pred CCC----------CcceEEEEEEEHHHhhhcc
Confidence 322 2588999999999999863
No 58
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.70 E-value=8.4e-17 Score=128.00 Aligned_cols=114 Identities=18% Similarity=0.096 Sum_probs=73.1
Q ss_pred cCCccceEEEEEEecCCceEEEEeccCcEEEEEEee--CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeece
Q psy7748 47 YKSGYHASHCMIFAYNDDKIFATYTARANVLMQMRF--DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSD 123 (232)
Q Consensus 47 ~~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~ 123 (232)
...++..++++++..+ .+++||+++|. +|.|+||||++|+||++++||+||++||||+.+. ..++...
T Consensus 36 ~~~~~~~~~~vi~~~~---------~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~l~~~ 106 (194)
T 2fvv_A 36 GDGYKKRAACLCFRSE---------SEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRLVGIF 106 (194)
T ss_dssp TTSCEEEEEEEEESST---------TCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEE
T ss_pred cCCccccEEEEEEEEC---------CCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccceEEEEE
Confidence 3455666777776432 12467777763 6899999999999999999999999999999987 4444333
Q ss_pred eeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccccC
Q psy7748 124 LVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFR 182 (232)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i~ 182 (232)
.. .. ... ..++|.+.+... ....+ ....+..++.|++++++++++.
T Consensus 107 ~~---~~-~~~-~~~~f~~~~~~~-~~~~~-------~~~e~~~~~~W~~~~el~~~l~ 152 (194)
T 2fvv_A 107 EN---QE-RKH-RTYVYVLIVTEV-LEDWE-------DSVNIGRKREWFKIEDAIKVLQ 152 (194)
T ss_dssp EE---TT-TTE-EEEEEEEEEEEE-CSSCH-------HHHHHCCCEEEEEHHHHHHHHT
T ss_pred Ec---CC-Cce-EEEEEEEEEccc-cCCCC-------CcccccceEEEEEHHHHHHHHh
Confidence 21 11 222 344555544321 10000 0001336899999999998753
No 59
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.69 E-value=2.9e-16 Score=131.22 Aligned_cols=142 Identities=15% Similarity=0.166 Sum_probs=88.9
Q ss_pred CCccceEEEEEEecCCceEEEEeccCcEEEEEEee----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeec
Q psy7748 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRF----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDS 122 (232)
Q Consensus 48 ~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~ 122 (232)
.....++.++++..+++ ...++||+++|. +|.|.||||++++||++++||+||++||||+.+. ..+. .
T Consensus 36 ~~p~v~v~~vv~~~~~~------~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~-~ 108 (273)
T 2fml_A 36 EKPSLTVDMVLLCYNKE------ADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIE-Q 108 (273)
T ss_dssp CCCEEEEEEEEEEEETT------TTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEE-E
T ss_pred CCCceEEEEEEEEEcCC------CCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEE-E
Confidence 34456677777663321 012467888773 4899999999999999999999999999998765 2211 1
Q ss_pred eeeeee--ecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc-------------------
Q psy7748 123 DLVCIH--YSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF------------------- 181 (232)
Q Consensus 123 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i------------------- 181 (232)
.+.+.. .....+.+.++|.+.+..... . .+.|..++.|+|++++.+++
T Consensus 109 l~~~~~~~r~~~~~~~~~~y~a~~~~~~~-~----------~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~ 177 (273)
T 2fml_A 109 LHSFSRPDRDPRGWVVTVSYLAFIGEEPL-I----------AGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASL 177 (273)
T ss_dssp EEEECCTTSSTTSSEEEEEEEEECCCCCC-C----------CCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBC
T ss_pred EEEEcCCCCCCCceEEEEEEEEEeCCCCC-C----------CCcceeeEEEEEhhHhhhhhccccchhhhcccccccccc
Confidence 122211 112235677778777654321 1 12478899999999865543
Q ss_pred C-CchHHHHHHHHHHHHHHHHHHHHhC
Q psy7748 182 R-GLPCFLTHSFIGNAKHQLLAALLKL 207 (232)
Q Consensus 182 ~-~~~~~l~~~~i~~~~~~l~~~l~~~ 207 (232)
. .--+|..+.++..+..++...+...
T Consensus 178 ~~~~LafdH~~Il~~al~rlr~kl~y~ 204 (273)
T 2fml_A 178 GKDTLAFDHSEIIIKAFNRVVDKMEHE 204 (273)
T ss_dssp SSSCCSTTHHHHHHHHHHHHHHHTTTC
T ss_pred CCCcccccHHHHHHHHHHHHHHHhcCC
Confidence 0 0112334556666767776665444
No 60
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.69 E-value=2.3e-16 Score=120.84 Aligned_cols=42 Identities=36% Similarity=0.586 Sum_probs=38.0
Q ss_pred EEEEEEe-eCCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc
Q psy7748 75 NVLMQMR-FDGYIGFPGGLVDAGESPLEALNRELNEEINLNPK 116 (232)
Q Consensus 75 ~vLl~~R-~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 116 (232)
++|+++| .+|.|.||||++++|||+.+||+||++||||+.+.
T Consensus 13 ~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 55 (156)
T 1k2e_A 13 KVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVE 55 (156)
T ss_dssp EEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEE
T ss_pred EEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCCcce
Confidence 5677777 45899999999999999999999999999999987
No 61
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.69 E-value=6.4e-17 Score=125.55 Aligned_cols=107 Identities=15% Similarity=0.162 Sum_probs=72.9
Q ss_pred cceEEEEEEecCCceEEEEeccCcEEEEEEee------CCeee-cceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeec
Q psy7748 51 YHASHCMIFAYNDDKIFATYTARANVLMQMRF------DGYIG-FPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDS 122 (232)
Q Consensus 51 ~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~------~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~ 122 (232)
+.++++++++.+ +++|+++|. +|.|+ +|||++++|||+.+||+||++||||+.+. ..+...
T Consensus 34 ~~~v~v~i~~~~-----------~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~ 102 (171)
T 1q27_A 34 VRVVNAFLRNSQ-----------GQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRPL 102 (171)
T ss_dssp CEEEEEEEEETT-----------TEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEEE
T ss_pred ceEEEEEEECCC-----------CeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEEE
Confidence 556677777765 356777772 58898 99999999999999999999999999987 322111
Q ss_pred eeeee-eecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 123 DLVCI-HYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
..+. +...... ..++|.+.. .+.+... ..|..++.|+|++++.+++
T Consensus 103 -~~~~~~~~~~~~-~~~~f~~~~-~~~~~~~----------~~E~~~~~W~~~~el~~~~ 149 (171)
T 1q27_A 103 -ASFSPFQTTLSS-FMCVYELRS-DATPIFN----------PNDISGGEWLTPEHLLARI 149 (171)
T ss_dssp -EEECSSSSCCSS-EEEEEEEEC-CCCCCSC----------TTTCSCCEEECHHHHHHHH
T ss_pred -EEEeccCCCCcc-EEEEEEEEE-CCccccC----------chhhheEEEecHHHHHHHH
Confidence 1111 1111122 567777766 3322211 2478899999999999764
No 62
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.68 E-value=3.4e-16 Score=117.12 Aligned_cols=92 Identities=24% Similarity=0.215 Sum_probs=65.7
Q ss_pred EEEEEEee-----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCc
Q psy7748 75 NVLMQMRF-----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTD 148 (232)
Q Consensus 75 ~vLl~~R~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
.+|+++|. +|.|+||||++++||++++||.||++||||+.+. ...+.... +.....+...++|.+....+.
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 97 (140)
T 2rrk_A 21 KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEYVASHQ---REVSGRIIHLHAWHVPDFHGT 97 (140)
T ss_dssp EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEEEEEEE---EEETTEEEEEEEEEESEEEEC
T ss_pred EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccEEEEEE---EecCCcEEEEEEEEEEeeCCC
Confidence 56777773 4899999999999999999999999999999987 43333221 112233556677777654322
Q ss_pred ccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 149 VLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 149 ~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
+. ..|..++.|++++++.++.
T Consensus 98 ~~------------~~e~~~~~W~~~~el~~~~ 118 (140)
T 2rrk_A 98 LQ------------AHEHQALVWCSPEEALQYP 118 (140)
T ss_dssp CC------------CSSCSCEEEECHHHHTTSC
T ss_pred cC------------CCccceeEEeCHHHHhhCC
Confidence 11 1366789999999999863
No 63
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.67 E-value=1.8e-16 Score=116.85 Aligned_cols=92 Identities=23% Similarity=0.399 Sum_probs=65.9
Q ss_pred cEEEEEEee-----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecC
Q psy7748 74 ANVLMQMRF-----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKT 147 (232)
Q Consensus 74 ~~vLl~~R~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+++|+++|. +|.|+||||++++||++.+||.||++||||+.+. ...+.... +.....+...++|.+....+
T Consensus 16 ~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 92 (129)
T 1mut_A 16 NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKLE---YEFPDRHITLWFWLVERWEG 92 (129)
T ss_dssp TEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECCCCCCB---CCCSSCEEECCCEEEEECSS
T ss_pred CEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceEEEEEE---EecCCceEEEEEEEEEccCC
Confidence 356777773 3899999999999999999999999999999987 43332221 11122345566777776543
Q ss_pred cccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 148 DVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 148 ~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
.+. ..|..++.|+|++++.++
T Consensus 93 ~~~------------~~e~~~~~W~~~~el~~~ 113 (129)
T 1mut_A 93 EPW------------GKEGQPGEWMSLVGLNAD 113 (129)
T ss_dssp CCC------------CCSSCCCEEEESSSCCTT
T ss_pred ccC------------CcccceeEEeCHHHcccc
Confidence 221 136778999999999886
No 64
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.64 E-value=6.3e-16 Score=132.64 Aligned_cols=113 Identities=22% Similarity=0.288 Sum_probs=71.7
Q ss_pred CCccceEEEEEEecCCceEEEEeccCcEEEEEEee----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeec
Q psy7748 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRF----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDS 122 (232)
Q Consensus 48 ~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~ 122 (232)
+..+.++++++++. +++|+++|. +|.|++|||++|+|||+++||+||++||||+.+. ..+...
T Consensus 200 ~~~~~~v~~vi~~~------------~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~ 267 (341)
T 2qjo_A 200 APTFITTDAVVVQA------------GHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGS 267 (341)
T ss_dssp CCCEEEEEEEEEET------------TEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHT
T ss_pred CCCceEEEEEEEeC------------CEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCcccccccccc
Confidence 34456677777642 256777773 5899999999999999999999999999999987 433221
Q ss_pred ---eeeeeeec--CCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 123 ---DLVCIHYS--QSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 123 ---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
...+.... ...+...++|.+.+..+.... .. .+.|..++.|+|++++.++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~-------~~-~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 268 IVDSHVFDAPGRSLRGRTITHAYFIQLPGGELPA-------VK-GGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp EEEEEEECCTTSCTTSCEEEEEEEEECCSSSCCC-------CC-------CEEEEEHHHHHHT
T ss_pred ccceEEEeCCCCCCCCcEEEEEEEEEecCCCcCc-------cC-CCCceeeEEEeeHHHHhhh
Confidence 11111111 122455667777665433110 01 1257889999999999985
No 65
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.63 E-value=2.5e-15 Score=129.50 Aligned_cols=114 Identities=19% Similarity=0.250 Sum_probs=73.7
Q ss_pred CCccceEEEEEEecCCceEEEEeccCcEEEEEEee----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeee-
Q psy7748 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRF----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKD- 121 (232)
Q Consensus 48 ~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~- 121 (232)
+....+++++++. + +++|+.+|. +|.|++|||++|+|||+++||+||++||||+++. ..+..
T Consensus 205 ~~~~~~v~~vv~~-~-----------~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~ 272 (352)
T 2qjt_B 205 KPNFVTVDALVIV-N-----------DHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIA 272 (352)
T ss_dssp CCEEEEEEEEEEE-T-----------TEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHH
T ss_pred CCCceEEEEEEEE-C-----------CEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcce
Confidence 3445566666664 2 356777773 3899999999999999999999999999999987 32221
Q ss_pred --ceeeeeeecC--CcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeC-cccccc
Q psy7748 122 --SDLVCIHYSQ--SKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPL-YTMGDG 180 (232)
Q Consensus 122 --~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl-~el~~~ 180 (232)
....+..... ..+...++|.+.+..+.... ... .+.|..++.|+|+ +++.++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~------~~~-~~~E~~~~~W~~~~~el~~~ 329 (352)
T 2qjt_B 273 KRCEKVFDYPDRSVRGRTISHVGLFVFDQWPSLP------EIN-AADDAKDVKWISLGSNIKNI 329 (352)
T ss_dssp EEEEEEECCTTSCTTSEEEEEEEEEEECSCSSCC------CCC-CCTTEEEEEEEESSHHHHHT
T ss_pred eeeeEEecCCCCCCCccEEEEEEEEEEeCCCCCC------ccC-CCccceEEEEecHHHHHHhh
Confidence 1111111111 22445666666665433000 011 1258899999999 999885
No 66
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.63 E-value=1.3e-15 Score=127.04 Aligned_cols=110 Identities=15% Similarity=0.172 Sum_probs=70.0
Q ss_pred cceEEEEEEecCCceEEEEeccCcEEEEEEee--CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeee
Q psy7748 51 YHASHCMIFAYNDDKIFATYTARANVLMQMRF--DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCI 127 (232)
Q Consensus 51 ~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~ 127 (232)
..++++++++.+. +++|+.+|+ +|.|++|||++|+|||+++||+||++||||+++. +.... .+...
T Consensus 101 v~~v~avv~~~~~----------~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~~~~-~~~~~ 169 (271)
T 2a6t_A 101 IPVRGAIMLDMSM----------QQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRINPN-EFIDM 169 (271)
T ss_dssp CCEEEEEEBCSSS----------SEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTCCTT-CEEEE
T ss_pred CCeEEEEEEECCC----------CEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeeeeee-eeccC
Confidence 3566777777532 356676763 5899999999999999999999999999999987 32221 22222
Q ss_pred eecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 128 HYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
... . ...++|.+....... ..... .+.|+.++.|+|++++.++.
T Consensus 170 ~~~--~-~~~~~f~~~~~~~~~------~~~~~-~~~E~~~~~W~~~~el~~~~ 213 (271)
T 2a6t_A 170 TIR--G-QNVRLYIIPGISLDT------RFESR-TRKEISKIEWHNLMDLPTFK 213 (271)
T ss_dssp EET--T-EEEEEEEECCCCTTC------CCC-------EEEEEEEEGGGSTTCC
T ss_pred CcC--C-ceEEEEEEEEecCcc------cCCCC-CccceeEEEEEEHHHHHHHH
Confidence 221 1 234555554332110 00111 12589999999999999864
No 67
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.60 E-value=3.5e-15 Score=125.61 Aligned_cols=143 Identities=16% Similarity=0.118 Sum_probs=98.4
Q ss_pred CCccceEEEEEEecCCceEEEEeccCcEEEEEEe------eCCee-ecceeecCCCCCHHHHHhHHHHHhhCCCCc-ce-
Q psy7748 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMR------FDGYI-GFPGGLVDAGESPLEALNRELNEEINLNPK-YK- 118 (232)
Q Consensus 48 ~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R------~~g~w-~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~- 118 (232)
.-...++.+.+++.++ ...++++++| ++|+| .+|||++++||++.+||+||+.||+|+.+. ..
T Consensus 115 G~~~~~vh~~~~~~~~--------~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~ 186 (300)
T 3dup_A 115 GVRAYGVHLNGYVGAG--------ADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQ 186 (300)
T ss_dssp TCCEEEEEEEEEESCG--------GGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTT
T ss_pred ceEEEEEEEEEEEecC--------CeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhh
Confidence 5567788888888763 2237899999 67999 699999999999999999999999999875 22
Q ss_pred ---eeeceeeeeeecCCcEEEEEEEEEEeecCcc-cccccccccccCCCccceeeEeeeCcccccccCCchHHHHHHHHH
Q psy7748 119 ---VKDSDLVCIHYSQSKKIILHFYALQVEKTDV-LEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFRGLPCFLTHSFIG 194 (232)
Q Consensus 119 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i~~~~~~l~~~~i~ 194 (232)
.....|......+......++|.+.+..+.. .+. ++|+.++.|+|++++.+++.. | ..|..
T Consensus 187 l~~~g~i~y~~~~~~G~~~E~~~vy~~~l~~~~~p~~~----------~~EV~~~~~v~~~El~~~l~~-p----g~F~p 251 (300)
T 3dup_A 187 AIPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNT----------DGEMADFMLWPAAKVVEAVRT-T----EAFKF 251 (300)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEEEEECCTTCCCCCT----------TSSEEEEEEEEHHHHHHHHHH-C----CCBCT
T ss_pred ccccceEEEEEecCCCeEEEEEEEEEEEecCCCcCCCC----------chHhheEEEECHHHHHHHHhc-C----CCcCc
Confidence 1111222211111134456667666653321 111 259999999999999988632 1 13445
Q ss_pred HHHHHHHHHHHhCCCCCHH
Q psy7748 195 NAKHQLLAALLKLKILSPE 213 (232)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~ 213 (232)
+....++..|...|+++++
T Consensus 252 ~~~lV~ldfl~RhG~i~~~ 270 (300)
T 3dup_A 252 NVNLTVIDFAIRHGLIDPD 270 (300)
T ss_dssp THHHHHHHHHHHTTSSCTT
T ss_pred cHHHHHHHHHHHhCCcCCc
Confidence 5666677888889988877
No 68
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.59 E-value=3.5e-15 Score=129.48 Aligned_cols=109 Identities=17% Similarity=0.081 Sum_probs=67.9
Q ss_pred cCcEEEEEEee-CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeec-eeeeeeec---------CCcEEEEEE
Q psy7748 72 ARANVLMQMRF-DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDS-DLVCIHYS---------QSKKIILHF 139 (232)
Q Consensus 72 ~~~~vLl~~R~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~-~~~~~~~~---------~~~~~~~~~ 139 (232)
...+||+.+|. .|.|+||||++|+|||+++||+||++||||+.+. ..++.. .+.+.... .......++
T Consensus 36 ~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 115 (364)
T 3fjy_A 36 DSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLGPYLCEVEYPLSEEGKKTRHSHDCTADTKHTLY 115 (364)
T ss_dssp TTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEEEEEEEEC---------------------CEEE
T ss_pred CceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeeccccceEEEeccCCCcccccccccccCceEEEE
Confidence 44577887774 4899999999999999999999999999999987 433322 22221110 012456677
Q ss_pred EEEEeecCccc--cc-ccccccccCCCccceeeEeeeCccccccc
Q psy7748 140 YALQVEKTDVL--EI-EKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 140 ~~~~~~~~~~~--~~-~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
|.+....+... .. ........+ ..|+.++.|+|++++.+++
T Consensus 116 f~~~~~~~~~~~~l~~~~~~~~~~~-~~E~~~~~W~~~~e~~~~~ 159 (364)
T 3fjy_A 116 WMAQPISADDAEHLLDAFGPVHRAD-VGEINDIVWVSVREARKIL 159 (364)
T ss_dssp EEEEECCHHHHHTTHHHHCCCCCCC-TTTCCEEEEEEHHHHHHHC
T ss_pred EEEEecCCccccccccccCccccCC-ccceeeeecCcHHHHHHHh
Confidence 77776543210 00 000000111 2488999999999999876
No 69
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.59 E-value=2.5e-14 Score=120.52 Aligned_cols=153 Identities=14% Similarity=0.036 Sum_probs=85.3
Q ss_pred eecCCccCcc-ccccccCCcccccc---cCC--ccceEEEEEEecC---CceEEEEe---ccCcEEEEEEee-CCeeecc
Q psy7748 23 VYGRPSTNLN-DFIELTQSDLKDDK---YKS--GYHASHCMIFAYN---DDKIFATY---TARANVLMQMRF-DGYIGFP 89 (232)
Q Consensus 23 vy~~~~~~~~-~~~~~~~~~~~~~~---~~~--~~~a~~~vi~~~~---~~~v~~~~---~~~~~vLl~~R~-~g~w~lP 89 (232)
.|.+ ++.+. .....|.|+....- ..+ ..+++.++|...+ .+.++... ....++|+++|. .|.|+||
T Consensus 77 s~~g-~~~~~~g~p~np~Grtg~~gr~~l~~wgp~~a~~~vv~~~~~~~~g~~~~~~~~g~~~l~vLl~~r~~~g~W~lP 155 (292)
T 1q33_A 77 SKNG-LYEIENGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIP 155 (292)
T ss_dssp CTTS-CCCEETTEECCTTCCCSEEEEETCSSSEEEEEEEEEEEEECBCTTSCBCBCTTTCSBCEEEEEEECTTTCSEECC
T ss_pred eccc-ceeccCCcccCCCccccccCcccccccCccccceeeeeeecccccCceeeeccCCCCceEEEEEEecCCCcEeCC
Confidence 4555 56666 44445555422111 122 2346776665532 12111110 122368888884 4899999
Q ss_pred eeecCCCCCHHHHHhHHHHHhhCCCC------------c-ceeee----ceeeeeeecC----CcEEEEEEEEEEeecCc
Q psy7748 90 GGLVDAGESPLEALNRELNEEINLNP------------K-YKVKD----SDLVCIHYSQ----SKKIILHFYALQVEKTD 148 (232)
Q Consensus 90 gG~ve~gEs~~~aa~REl~EEtGl~~------------~-~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 148 (232)
||+|++||++.+||+||++||||+.+ . ..+.. ..|....... ......++|.+....+.
T Consensus 156 GG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~ 235 (292)
T 1q33_A 156 GGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGE 235 (292)
T ss_dssp CEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCTTCCSSEEEEEEEEEEEESSST
T ss_pred CcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCCCCCcccEEEEEEEEEEeCCCc
Confidence 99999999999999999999999983 2 11111 1121111111 12445556665543332
Q ss_pred ccccccccccccCCCccceeeEeeeCccccccc
Q psy7748 149 VLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGF 181 (232)
Q Consensus 149 ~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i 181 (232)
..... ... .+.|..++.|+++++++++.
T Consensus 236 ~~~~~----~~~-~~~E~~~~~W~~~del~~L~ 263 (292)
T 1q33_A 236 IMDNL----MLE-AGDDAGKVKWVDINDKLKLY 263 (292)
T ss_dssp TTTTC----CCC-CCTTCSEEEEEECCTTCCCS
T ss_pred ccccc----ccC-CCCccceEEEEEcccCcccC
Confidence 21100 011 23578999999999998754
No 70
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.59 E-value=3.2e-15 Score=114.12 Aligned_cols=91 Identities=19% Similarity=0.184 Sum_probs=64.1
Q ss_pred cEEEEEEee-----CCeeecceeecCCCCCHH-HHHhHHHHHhhC-CCCc-ceeeec-eeeeeeecCCcEEEEEEEEEEe
Q psy7748 74 ANVLMQMRF-----DGYIGFPGGLVDAGESPL-EALNRELNEEIN-LNPK-YKVKDS-DLVCIHYSQSKKIILHFYALQV 144 (232)
Q Consensus 74 ~~vLl~~R~-----~g~w~lPgG~ve~gEs~~-~aa~REl~EEtG-l~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 144 (232)
+.+|+++|. +|.|+||||.++.||++. +||.||++|||| +.+. ...+.. .+.+ ...+...++|.+.+
T Consensus 34 ~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~ 109 (155)
T 1x51_A 34 AQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRHLGEVVHTF----SHIKLTYQVYGLAL 109 (155)
T ss_dssp EEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEECCCBCCBC----SSCEEEEEEEEEEC
T ss_pred CEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeeecceEEEec----CCccEEEEEEEEEE
Confidence 467888883 379999999999999996 999999999999 8776 333322 2221 12345667787776
Q ss_pred ecCcccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 145 EKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
..+.+.. .|..++.|++++++.++
T Consensus 110 ~~~~~~~------------~e~~~~~W~~~~el~~~ 133 (155)
T 1x51_A 110 EGQTPVT------------TVPPGARWLTQEEFHTA 133 (155)
T ss_dssp SSCCCCC------------CCCTTEEEEEHHHHHHS
T ss_pred cCCCCCC------------CCCCccEEccHHHhhhc
Confidence 5332211 24567899999999875
No 71
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.59 E-value=5.8e-15 Score=120.68 Aligned_cols=112 Identities=13% Similarity=0.076 Sum_probs=75.3
Q ss_pred CccceEEEEEEecCCceEEEEeccCcEEEEEEe------eCCeeecc-eeecCCC------CCH---HHHHhHHHHHhhC
Q psy7748 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMR------FDGYIGFP-GGLVDAG------ESP---LEALNRELNEEIN 112 (232)
Q Consensus 49 ~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R------~~g~w~lP-gG~ve~g------Es~---~~aa~REl~EEtG 112 (232)
-.++++++++++.+ ++||+++| ++|.|.+| ||++++| |++ .+||+||++||||
T Consensus 57 ~~h~av~v~v~~~~-----------g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElG 125 (235)
T 2dho_A 57 LLHRAFSVFLFNTE-----------NKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELG 125 (235)
T ss_dssp CCEEEEEEEEECTT-----------CCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHC
T ss_pred ceEEEEEEEEEcCC-----------CEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHC
Confidence 35677788888765 35788888 45899999 5999999 884 9999999999999
Q ss_pred CCCc-c-----eeeec-eeeeeeecC-CcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccccC
Q psy7748 113 LNPK-Y-----KVKDS-DLVCIHYSQ-SKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFR 182 (232)
Q Consensus 113 l~~~-~-----~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i~ 182 (232)
+.+. + ..+.. .|....... ..+.+.++|.+... ..+.+. ..|+.++.|++++++.+++.
T Consensus 126 i~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~-~~~~~~----------~~Ev~~~~wv~~~el~~~l~ 192 (235)
T 2dho_A 126 IPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRMN-VTLNPD----------PNEIKSYCYVSKEELKELLK 192 (235)
T ss_dssp CCGGGSCGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEECC-CCCCCC----------TTTEEEEEEECHHHHHHHHH
T ss_pred CCccccChhhcEEEEEEEEeccCCCccceeEEEEEEEEEEC-CCCcCC----------hHHEEEEEEEcHHHHHHHHh
Confidence 9864 2 22222 122211111 12445667777653 222221 25899999999999998763
No 72
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.57 E-value=1.1e-14 Score=119.76 Aligned_cols=112 Identities=13% Similarity=0.065 Sum_probs=75.3
Q ss_pred CccceEEEEEEecCCceEEEEeccCcEEEEEEe------eCCeeecce-eecCCC------CCH---HHHHhHHHHHhhC
Q psy7748 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMR------FDGYIGFPG-GLVDAG------ESP---LEALNRELNEEIN 112 (232)
Q Consensus 49 ~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R------~~g~w~lPg-G~ve~g------Es~---~~aa~REl~EEtG 112 (232)
-.++++++++++.+ ++||+++| ++|.|.+|+ |++++| |++ ++||+||++||||
T Consensus 68 ~~h~av~v~v~~~~-----------g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElG 136 (246)
T 2pny_A 68 LLHRAFSVVLFNTK-----------NRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELG 136 (246)
T ss_dssp CCEEEEEEEEECTT-----------CCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHC
T ss_pred cEEEEEEEEEEeCC-----------CEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHC
Confidence 45667788888755 35788888 458999995 999999 887 9999999999999
Q ss_pred CCCc-c-----eeeec-eeeeeeecC-CcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccccC
Q psy7748 113 LNPK-Y-----KVKDS-DLVCIHYSQ-SKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFR 182 (232)
Q Consensus 113 l~~~-~-----~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i~ 182 (232)
+.+. + ..+.. .|....... ..+.+.++|.+... ..+.+. ..|+.++.|++++++.+++.
T Consensus 137 i~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~-~~~~~~----------~~Ev~~~~wv~~eel~~~l~ 203 (246)
T 2pny_A 137 IPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKN-VTLNPD----------PSETKSILYLSQEELWELLE 203 (246)
T ss_dssp CCTTTCCGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEECC-CCCCCC----------TTTEEEEEEECHHHHHHHHH
T ss_pred CCccccCccccEEEEEEEEEecCCCceeeeEEEEEEEEEEC-CCCCCC----------hHHeeEEEEEeHHHHHHHHH
Confidence 9864 2 22221 122111111 12445666776643 222221 25899999999999998763
No 73
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.57 E-value=2e-15 Score=120.92 Aligned_cols=113 Identities=16% Similarity=0.165 Sum_probs=71.8
Q ss_pred CCccceEEEEEEecCCceEEEEeccCcEEEEEEee--------CCeeec-ceeecCCCCC--H----HHHHhHHHHHhhC
Q psy7748 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRF--------DGYIGF-PGGLVDAGES--P----LEALNRELNEEIN 112 (232)
Q Consensus 48 ~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~--------~g~w~l-PgG~ve~gEs--~----~~aa~REl~EEtG 112 (232)
+.++..+..+++..+ +++|+.+|. .|.|.+ |||+||+||| + ++||+||++||||
T Consensus 64 ~~~~q~i~~~II~~~-----------grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtG 132 (211)
T 3e57_A 64 ETTKQVIPYVVIMDG-----------DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVD 132 (211)
T ss_dssp TTEEEEEEEEEEEET-----------TEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEE
T ss_pred CcccceEEEEEEEEC-----------CEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhC
Confidence 344555555555544 357777772 157998 9999999998 5 9999999999999
Q ss_pred CCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccccCCc
Q psy7748 113 LNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDGFRGL 184 (232)
Q Consensus 113 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~i~~~ 184 (232)
+++. ..+.+.........+. ..+.++|.|....+.+ .+ .|..++.|+++++++++...+
T Consensus 133 l~v~~~~~ig~~~~~~~~~~~-~~l~~~f~~~~~~g~~--~~----------~E~~~~~W~~~~eL~~~~~~l 192 (211)
T 3e57_A 133 VSLRELEFLGLINSSTTEVSR-VHLGALFLGRGKFFSV--KE----------KDLFEWELIKLEELEKFSGVM 192 (211)
T ss_dssp EEEEEEEEEEEEECCSSHHHH-TEEEEEEEEEEEEEEE--SC----------TTTCEEEEEEHHHHHHHGGGC
T ss_pred CeeeccEEEEEEeccCCCCCe-EEEEEEEEEEeCCcee--CC----------CCeEEEEEEEHHHHHHhHhhc
Confidence 9876 4444332221111111 2344567777653322 11 467799999999999875444
No 74
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.43 E-value=6.8e-13 Score=115.29 Aligned_cols=88 Identities=17% Similarity=0.066 Sum_probs=65.1
Q ss_pred cEEEEEEee-----CCeeecceeecCCCCCHHHHHhHHHHHhhCCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecC
Q psy7748 74 ANVLMQMRF-----DGYIGFPGGLVDAGESPLEALNRELNEEINLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKT 147 (232)
Q Consensus 74 ~~vLl~~R~-----~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+.+|+++|. +|.|+||||++|.| ++++|+.||++||||+.+. ...+... .+.....+...++|.+....+
T Consensus 252 g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~l~~~---~h~~~h~~~~~~~~~~~~~~~ 327 (369)
T 3fsp_A 252 GRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEPIVSF---EHAFSHLVWQLTVFPGRLVHG 327 (369)
T ss_dssp SEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCCCCEE---EEECSSEEEEEEEEEEEECCS
T ss_pred CEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecccccE---EEEcceEEEEEEEEEEEEcCC
Confidence 467888883 48999999999999 9999999999999999987 4322211 112223356777888776432
Q ss_pred cccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 148 DVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 148 ~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
..|..++.|++++++.+.
T Consensus 328 ---------------~~e~~~~~Wv~~~el~~~ 345 (369)
T 3fsp_A 328 ---------------GPVEEPYRLAPEDELKAY 345 (369)
T ss_dssp ---------------SCCCTTEEEEEGGGGGGS
T ss_pred ---------------CCCccccEEeeHHHhhhC
Confidence 135668999999999885
No 75
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.39 E-value=1.1e-12 Score=106.70 Aligned_cols=61 Identities=25% Similarity=0.364 Sum_probs=47.9
Q ss_pred CccceEEEEEEecCCceEEEEeccCcEEEEEEe------eCCeeecceeecCCCCC--------------------HHHH
Q psy7748 49 SGYHASHCMIFAYNDDKIFATYTARANVLMQMR------FDGYIGFPGGLVDAGES--------------------PLEA 102 (232)
Q Consensus 49 ~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R------~~g~w~lPgG~ve~gEs--------------------~~~a 102 (232)
..++++++|+++.... ...+||+.+| ++|.|.||||+||++|+ +..|
T Consensus 6 ~~r~aA~lill~~~~~-------g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~a 78 (232)
T 3qsj_A 6 DIRKAATLVVIRDGAN-------KDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVT 78 (232)
T ss_dssp CEEEEEEEEEEEECGG-------GCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHH
T ss_pred CCcceEEEEEEEcCCC-------CCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHH
Confidence 4577888887775421 0137888888 25899999999999996 5899
Q ss_pred HhHHHHHhhCCCCc
Q psy7748 103 LNRELNEEINLNPK 116 (232)
Q Consensus 103 a~REl~EEtGl~~~ 116 (232)
|+||++||||+.+.
T Consensus 79 AiRE~~EE~Gl~l~ 92 (232)
T 3qsj_A 79 ALRETAEEIGWLLA 92 (232)
T ss_dssp HHHHHHHHHSCCCS
T ss_pred HHHHHHHHhCceec
Confidence 99999999999865
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.14 E-value=4.4e-10 Score=88.43 Aligned_cols=114 Identities=15% Similarity=0.188 Sum_probs=71.0
Q ss_pred CCccceEEEEEEecCCceEEEEeccCcEEEEEEeeCCeeecceeecCCCCCHHHHHhHHHHHhhCC------CCc-ceee
Q psy7748 48 KSGYHASHCMIFAYNDDKIFATYTARANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEINL------NPK-YKVK 120 (232)
Q Consensus 48 ~~~~~a~~~vi~~~~~~~v~~~~~~~~~vLl~~R~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl------~~~-~~~~ 120 (232)
-+.|..|.++++..+.+ ..+||+.++..+.|.||||++++||++++|++|||.||+|. +.. ...+
T Consensus 55 ~g~R~sV~avil~~~~~--------~phVLLlq~~~~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~l 126 (208)
T 3bho_A 55 IGMRRTVEGVLIVHEHR--------LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCI 126 (208)
T ss_dssp HCSEEEEEEEEEEEETT--------EEEEEEEEEETTEEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEEE
T ss_pred hCCceEEEEEEEEcCCC--------CcEEEEEEcCCCcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhheE
Confidence 45677777776654322 12566666678899999999999999999999999999994 333 2334
Q ss_pred eceeeeeeecC----------CcEEEEEEEEEEeecCcccccccccccccCCCccceeeEeeeCcccccc
Q psy7748 121 DSDLVCIHYSQ----------SKKIILHFYALQVEKTDVLEIEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 121 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
+.+|...+... ....+.-+|.+.+.....-.. .....+.-+|+=+|-+.
T Consensus 127 g~wwRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~~f~v-----------Pkn~kL~AvPLfely~N 185 (208)
T 3bho_A 127 GNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAV-----------PKNYKLVAAPLFELYDN 185 (208)
T ss_dssp EEEEECSSSSCCBSSCCTTCCSCSEEEEEEEEECCSSEEEEE-----------ETTCEEEEEEHHHHTTC
T ss_pred EEEecCCCCCcCCCCCCcccCchhhheeeeeEecCccceEec-----------CCCCeEEeecHHhhhcc
Confidence 44443222110 224555666766654321111 13456777777776653
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.03 E-value=3.4e-10 Score=96.24 Aligned_cols=81 Identities=10% Similarity=-0.036 Sum_probs=55.8
Q ss_pred cEEEEEEeeCCeeecceeecCCCCCHHHHHhHHHHHhh-CCCCc-ceeeeceeeeeeecCCcEEEEEEEEEEeecCcccc
Q psy7748 74 ANVLMQMRFDGYIGFPGGLVDAGESPLEALNRELNEEI-NLNPK-YKVKDSDLVCIHYSQSKKIILHFYALQVEKTDVLE 151 (232)
Q Consensus 74 ~~vLl~~R~~g~w~lPgG~ve~gEs~~~aa~REl~EEt-Gl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (232)
++|||+ ...| |.||||.++ ++..++|+||++||| |+.+. ..+...+ ... ....+.++|.|.+..++
T Consensus 194 g~vLL~-~~~G-W~LPG~~~~--~~~~~~a~RE~~EEttGl~v~~~~L~~v~-~~~----~~~~~~i~f~~~~~~g~--- 261 (321)
T 3rh7_A 194 GAVFLA-GNET-LSLPNCTVE--GGDPARTLAAYLEQLTGLNVTIGFLYSVY-EDK----SDGRQNIVYHALASDGA--- 261 (321)
T ss_dssp SCEEEB-CSSE-EBCCEEEES--SSCHHHHHHHHHHHHHSSCEEEEEEEEEE-ECT----TTCCEEEEEEEEECSSC---
T ss_pred CEEEEe-eCCC-ccCCcccCC--CChhHHHHHHHHHHhcCCEEeeceEEEEE-EcC----CCceEEEEEEEEeCCCC---
Confidence 356666 4457 999988665 444459999999997 99998 4444332 211 12334578888775432
Q ss_pred cccccccccCCCccceeeEeeeCcccccc
Q psy7748 152 IEKGALTSHDYGVEVLGTVRVPLYTMGDG 180 (232)
Q Consensus 152 ~~~~~~~~~~~~~E~~~~~wvpl~el~~~ 180 (232)
..++.||++++|+..
T Consensus 262 --------------~~e~~~f~~~elp~~ 276 (321)
T 3rh7_A 262 --------------PRQGRFLRPAELAAA 276 (321)
T ss_dssp --------------CSSSEEECHHHHTTC
T ss_pred --------------eeeeEEECHHHCCCc
Confidence 357999999999987
No 78
>3a8g_B NitrIle hydratase subunit beta; Fe, iron, lyase, metal-binding, oxidation; 1.11A {Rhodococcus erythropolis} PDB: 2ahj_B 2cyz_B* 2cz0_B 2cz6_B 2cz7_B 2d0q_B 2cz1_B 2zcf_B 2zpb_B 2zpe_B 2zpf_B 2zpg_B 2zph_B 2zpi_B 2qdy_B 3a8h_B 3a8l_B 3a8o_B 3a8m_B 1ahj_B
Probab=20.28 E-value=84 Score=24.40 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhcCCCCcc
Q psy7748 189 THSFIGNAKHQLLAALLKLKILSPEEINQALNAKPVPVK 227 (232)
Q Consensus 189 ~~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 227 (232)
...|.+.--.-+-..|.++|+++.++|..++.......+
T Consensus 69 ~~sYYe~WL~ale~lLvekGvit~~EL~~~~g~~~~~~~ 107 (212)
T 3a8g_B 69 MTPYYERYVIGVATLMVEKGILTQDELESLAGGPFPLSR 107 (212)
T ss_dssp HSCHHHHHHHHHHHHHHHTTSSCHHHHHHHHTSCCCCCC
T ss_pred CCCHHHHHHHHHHHHHHHcCCCCHHHHHhhhcccccccC
Confidence 334555455566678899999999999997777665443
Done!