Query psy775
Match_columns 1460
No_of_seqs 775 out of 4142
Neff 5.7
Searched_HMMs 46136
Date Fri Aug 16 17:51:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy775.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/775hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10117 trehalose-6-phosphate 100.0 7.8E-99 2E-103 900.2 43.2 389 138-558 60-455 (474)
2 TIGR02398 gluc_glyc_Psyn gluco 100.0 3.8E-96 8E-101 885.5 41.5 387 137-555 68-481 (487)
3 PLN02205 alpha,alpha-trehalose 100.0 1E-94 2.2E-99 922.2 46.0 458 136-627 130-631 (854)
4 PLN03064 alpha,alpha-trehalose 100.0 7.6E-94 1.7E-98 908.9 43.0 450 134-627 157-637 (934)
5 PF00982 Glyco_transf_20: Glyc 100.0 1.2E-94 2.6E-99 873.9 30.5 414 99-555 46-473 (474)
6 COG0380 OtsA Trehalose-6-phosp 100.0 3.2E-92 7E-97 838.7 35.0 384 138-556 84-479 (486)
7 PLN02205 alpha,alpha-trehalose 100.0 5.9E-91 1.3E-95 887.8 43.6 488 534-1122 178-726 (854)
8 PLN03064 alpha,alpha-trehalose 100.0 1.5E-88 3.3E-93 860.6 41.2 475 533-1123 208-732 (934)
9 PLN03063 alpha,alpha-trehalose 100.0 1.8E-87 3.9E-92 856.1 44.5 449 134-627 74-547 (797)
10 TIGR02400 trehalose_OtsA alpha 100.0 1.1E-86 2.3E-91 805.9 41.3 385 136-554 62-454 (456)
11 PRK10117 trehalose-6-phosphate 100.0 1.5E-86 3.3E-91 794.5 37.1 357 533-998 100-456 (474)
12 PRK14501 putative bifunctional 100.0 3.4E-83 7.4E-88 816.4 47.7 459 135-637 67-541 (726)
13 TIGR02398 gluc_glyc_Psyn gluco 100.0 2E-83 4.4E-88 774.9 37.5 355 534-996 110-483 (487)
14 PF00982 Glyco_transf_20: Glyc 100.0 5.7E-83 1.2E-87 772.2 33.9 355 533-995 118-474 (474)
15 PLN03063 alpha,alpha-trehalose 100.0 6.8E-81 1.5E-85 795.8 43.8 466 534-1120 125-639 (797)
16 COG0380 OtsA Trehalose-6-phosp 100.0 1E-81 2.3E-86 748.9 33.8 354 533-996 124-480 (486)
17 cd03788 GT1_TPS Trehalose-6-Ph 100.0 1.1E-77 2.3E-82 730.4 43.1 388 134-554 64-459 (460)
18 PRK14501 putative bifunctional 100.0 5.1E-76 1.1E-80 750.6 44.3 497 534-1152 111-655 (726)
19 KOG1050|consensus 100.0 9.4E-73 2E-77 701.7 30.8 489 535-1146 119-642 (732)
20 TIGR02400 trehalose_OtsA alpha 100.0 7.3E-72 1.6E-76 676.5 36.9 351 534-994 105-455 (456)
21 KOG1050|consensus 100.0 7.2E-64 1.6E-68 622.4 31.5 445 133-627 67-532 (732)
22 cd03788 GT1_TPS Trehalose-6-Ph 100.0 9.1E-63 2E-67 599.6 37.9 353 533-994 108-460 (460)
23 PRK15484 lipopolysaccharide 1, 99.9 2E-21 4.3E-26 231.9 29.4 257 211-525 99-363 (380)
24 cd03792 GT1_Trehalose_phosphor 99.9 9.7E-22 2.1E-26 232.6 22.8 284 176-525 61-357 (372)
25 TIGR03449 mycothiol_MshA UDP-N 99.8 2.6E-19 5.6E-24 213.7 30.1 274 211-525 101-387 (405)
26 PLN02939 transferase, transfer 99.8 1.2E-19 2.6E-24 230.4 26.7 261 211-504 610-930 (977)
27 PRK00654 glgA glycogen synthas 99.8 1.7E-19 3.6E-24 221.1 25.8 273 190-504 103-427 (466)
28 PRK15484 lipopolysaccharide 1, 99.8 5.9E-19 1.3E-23 210.8 29.6 278 567-996 100-378 (380)
29 TIGR02468 sucrsPsyn_pln sucros 99.8 3.8E-19 8.3E-24 228.8 29.3 286 212-525 311-656 (1050)
30 TIGR02472 sucr_P_syn_N sucrose 99.8 1.3E-19 2.9E-24 220.3 23.9 200 311-525 208-426 (439)
31 TIGR02095 glgA glycogen/starch 99.8 1.9E-19 4.2E-24 220.6 24.6 272 190-504 113-436 (473)
32 PLN02316 synthase/transferase 99.8 4E-19 8.7E-24 229.3 28.3 252 211-508 709-1001(1036)
33 cd03818 GT1_ExpC_like This fam 99.8 3.7E-19 8E-24 212.8 25.8 272 211-525 87-386 (396)
34 PRK14098 glycogen synthase; Pr 99.8 1.6E-19 3.5E-24 222.5 21.9 281 180-504 120-450 (489)
35 cd03800 GT1_Sucrose_synthase T 99.8 6.1E-18 1.3E-22 199.3 34.0 274 211-525 101-388 (398)
36 cd03796 GT1_PIG-A_like This fa 99.8 1E-18 2.3E-23 209.2 27.0 262 211-525 88-353 (398)
37 PRK14099 glycogen synthase; Pr 99.8 9.6E-19 2.1E-23 215.4 26.5 265 211-515 133-457 (485)
38 cd03792 GT1_Trehalose_phosphor 99.8 6.6E-19 1.4E-23 208.6 23.2 284 567-995 86-371 (372)
39 PRK15427 colanic acid biosynth 99.8 1.5E-18 3.2E-23 209.3 26.6 261 211-525 118-391 (406)
40 TIGR02149 glgA_Coryne glycogen 99.8 2.7E-18 5.8E-23 203.0 28.0 271 211-525 83-372 (388)
41 TIGR03088 stp2 sugar transfera 99.8 3.6E-18 7.8E-23 201.6 27.5 192 311-525 159-358 (374)
42 cd03806 GT1_ALG11_like This fa 99.8 3.9E-18 8.5E-23 206.5 25.8 192 313-525 213-412 (419)
43 PLN00142 sucrose synthase 99.8 7.1E-18 1.5E-22 213.7 26.9 317 178-525 384-756 (815)
44 PLN02871 UDP-sulfoquinovose:DA 99.8 1E-17 2.3E-22 205.1 26.3 260 211-525 144-419 (465)
45 cd03812 GT1_CapH_like This fam 99.8 7.2E-18 1.6E-22 195.8 23.6 257 211-517 80-343 (358)
46 TIGR02470 sucr_synth sucrose s 99.8 2.5E-17 5.4E-22 208.8 30.1 317 178-525 361-733 (784)
47 cd03805 GT1_ALG2_like This fam 99.8 9.8E-18 2.1E-22 198.5 24.9 193 315-525 182-384 (392)
48 cd03813 GT1_like_3 This family 99.8 1.4E-18 3.1E-23 213.4 18.2 188 310-525 265-461 (475)
49 PLN02939 transferase, transfer 99.8 1.6E-17 3.4E-22 211.3 27.6 345 546-998 596-969 (977)
50 cd05844 GT1_like_7 Glycosyltra 99.8 1.8E-17 3.9E-22 193.8 25.6 261 211-525 82-356 (367)
51 cd03791 GT1_Glycogen_synthase_ 99.8 6.9E-18 1.5E-22 206.5 23.0 258 211-505 129-442 (476)
52 TIGR03449 mycothiol_MshA UDP-N 99.8 2.6E-17 5.7E-22 196.6 26.4 243 623-996 160-402 (405)
53 cd04951 GT1_WbdM_like This fam 99.8 2.7E-17 5.8E-22 190.6 25.1 261 211-525 79-346 (360)
54 cd04962 GT1_like_5 This family 99.8 1.1E-16 2.3E-21 187.5 28.8 266 211-525 84-356 (371)
55 cd03819 GT1_WavL_like This fam 99.8 4.3E-17 9.3E-22 189.1 24.8 261 211-525 78-350 (355)
56 PRK14098 glycogen synthase; Pr 99.8 6.3E-17 1.4E-21 199.6 25.8 336 546-996 127-486 (489)
57 cd03821 GT1_Bme6_like This fam 99.8 8E-17 1.7E-21 184.6 24.6 191 311-525 170-365 (375)
58 TIGR02095 glgA glycogen/starch 99.8 4E-17 8.7E-22 200.3 23.6 331 546-994 114-471 (473)
59 PRK00654 glgA glycogen synthas 99.8 5.8E-17 1.2E-21 198.8 24.9 335 546-996 104-463 (466)
60 PRK10307 putative glycosyl tra 99.7 1.6E-16 3.5E-21 191.0 27.1 265 211-525 106-393 (412)
61 cd03809 GT1_mtfB_like This fam 99.7 2.7E-17 5.8E-22 189.6 19.3 263 211-525 85-355 (365)
62 PLN02949 transferase, transfer 99.7 6.5E-17 1.4E-21 198.0 23.6 191 313-525 244-442 (463)
63 cd04946 GT1_AmsK_like This fam 99.7 7.5E-17 1.6E-21 194.5 23.8 262 211-525 127-397 (407)
64 PRK15179 Vi polysaccharide bio 99.7 7.5E-17 1.6E-21 204.4 24.4 189 310-525 480-679 (694)
65 PLN02316 synthase/transferase 99.7 1.8E-16 3.8E-21 205.1 28.2 334 546-996 695-1034(1036)
66 cd03818 GT1_ExpC_like This fam 99.7 1.6E-16 3.4E-21 190.3 25.6 185 739-990 209-395 (396)
67 cd03801 GT1_YqgM_like This fam 99.7 2.8E-16 6.1E-21 178.0 26.3 268 211-525 85-361 (374)
68 cd03799 GT1_amsK_like This is 99.7 2.6E-16 5.6E-21 182.1 26.4 260 211-525 79-347 (355)
69 cd03807 GT1_WbnK_like This fam 99.7 2.6E-16 5.7E-21 179.6 26.1 265 211-525 80-352 (365)
70 TIGR02472 sucr_P_syn_N sucrose 99.7 8.8E-17 1.9E-21 195.7 23.5 183 739-993 246-438 (439)
71 cd03822 GT1_ecORF704_like This 99.7 2.1E-16 4.6E-21 182.2 25.3 269 211-525 76-353 (366)
72 cd03798 GT1_wlbH_like This fam 99.7 6.8E-16 1.5E-20 175.9 28.8 265 211-525 93-362 (377)
73 TIGR02468 sucrsPsyn_pln sucros 99.7 1.7E-16 3.7E-21 204.7 25.9 190 739-999 477-674 (1050)
74 PRK15490 Vi polysaccharide bio 99.7 1.9E-16 4.2E-21 193.5 23.8 165 310-501 360-534 (578)
75 PRK14099 glycogen synthase; Pr 99.7 2E-16 4.2E-21 195.1 23.5 343 546-998 117-481 (485)
76 cd03817 GT1_UGDG_like This fam 99.7 4.3E-16 9.3E-21 178.9 24.6 252 211-513 84-351 (374)
77 PRK09922 UDP-D-galactose:(gluc 99.7 2.8E-16 6.1E-21 185.8 23.6 236 211-508 84-327 (359)
78 PRK15427 colanic acid biosynth 99.7 3.4E-16 7.3E-21 189.0 24.7 178 740-995 221-405 (406)
79 cd03793 GT1_Glycogen_synthase_ 99.7 1.6E-16 3.4E-21 194.3 21.9 317 160-510 105-557 (590)
80 cd04949 GT1_gtfA_like This fam 99.7 2.6E-16 5.5E-21 185.6 22.8 290 163-525 67-364 (372)
81 PLN02949 transferase, transfer 99.7 4.7E-16 1E-20 190.5 25.1 193 740-998 267-459 (463)
82 TIGR02149 glgA_Coryne glycogen 99.7 9.7E-16 2.1E-20 181.3 26.7 290 568-996 85-387 (388)
83 cd03800 GT1_Sucrose_synthase T 99.7 1.6E-15 3.6E-20 178.7 27.8 287 568-990 103-397 (398)
84 PHA01633 putative glycosyl tra 99.7 1.2E-16 2.6E-21 187.5 17.8 179 317-525 118-325 (335)
85 cd03814 GT1_like_2 This family 99.7 6.9E-16 1.5E-20 177.5 23.0 257 211-525 83-351 (364)
86 cd03820 GT1_amsD_like This fam 99.7 4.9E-16 1.1E-20 175.8 21.2 252 211-525 83-338 (348)
87 TIGR03088 stp2 sugar transfera 99.7 1.6E-15 3.5E-20 179.2 26.2 180 739-995 192-372 (374)
88 TIGR02918 accessory Sec system 99.7 1.8E-15 4E-20 186.9 27.1 258 211-525 211-485 (500)
89 cd03791 GT1_Glycogen_synthase_ 99.7 9.3E-16 2E-20 187.8 24.2 334 546-993 115-474 (476)
90 cd03794 GT1_wbuB_like This fam 99.7 1.5E-15 3.3E-20 174.5 24.5 266 211-525 99-385 (394)
91 cd03806 GT1_ALG11_like This fa 99.7 1.1E-15 2.5E-20 185.2 24.3 179 740-984 236-415 (419)
92 cd03796 GT1_PIG-A_like This fa 99.7 1.7E-15 3.7E-20 181.6 25.4 280 568-998 90-370 (398)
93 cd03823 GT1_ExpE7_like This fa 99.7 3.7E-15 8.1E-20 170.8 26.6 238 211-513 96-337 (359)
94 cd03795 GT1_like_4 This family 99.7 2.3E-15 5E-20 174.3 23.4 262 211-525 83-352 (357)
95 PRK10125 putative glycosyl tra 99.7 1.7E-15 3.7E-20 183.0 22.7 149 312-500 212-366 (405)
96 cd03808 GT1_cap1E_like This fa 99.7 4.4E-15 9.5E-20 168.8 24.8 265 211-525 80-349 (359)
97 PHA01633 putative glycosyl tra 99.7 7.8E-16 1.7E-20 180.7 18.9 185 739-990 146-334 (335)
98 TIGR02470 sucr_synth sucrose s 99.7 9.4E-16 2E-20 194.6 20.9 186 739-993 548-745 (784)
99 PLN02580 trehalose-phosphatase 99.7 3.1E-17 6.7E-22 193.9 7.0 115 1342-1460 65-182 (384)
100 PLN00142 sucrose synthase 99.7 1.2E-15 2.7E-20 193.6 21.5 186 739-993 571-768 (815)
101 cd03805 GT1_ALG2_like This fam 99.7 4.9E-15 1.1E-19 175.5 25.1 179 739-988 209-391 (392)
102 cd04951 GT1_WbdM_like This fam 99.7 7.6E-15 1.6E-19 170.2 25.5 173 739-993 186-358 (360)
103 cd03811 GT1_WabH_like This fam 99.7 4.1E-15 8.9E-20 168.3 22.7 252 211-513 81-340 (353)
104 PLN02871 UDP-sulfoquinovose:DA 99.7 3.9E-15 8.5E-20 182.5 24.3 175 739-997 261-436 (465)
105 cd05844 GT1_like_7 Glycosyltra 99.7 6.6E-15 1.4E-19 172.2 24.3 172 740-990 187-365 (367)
106 PHA01630 putative group 1 glyc 99.7 3.7E-15 8.1E-20 175.5 21.8 174 312-525 118-316 (331)
107 cd03813 GT1_like_3 This family 99.7 2.5E-15 5.4E-20 184.9 19.6 181 739-991 291-472 (475)
108 PRK10307 putative glycosyl tra 99.6 2.3E-15 5E-20 181.0 18.8 236 626-999 171-411 (412)
109 cd04962 GT1_like_5 This family 99.6 4E-14 8.8E-19 165.8 28.5 282 568-995 86-370 (371)
110 cd03812 GT1_CapH_like This fam 99.6 1.1E-14 2.3E-19 169.3 23.4 164 739-983 190-353 (358)
111 cd04955 GT1_like_6 This family 99.6 1.3E-14 2.8E-19 168.7 23.8 182 315-525 167-350 (363)
112 PLN02846 digalactosyldiacylgly 99.6 4.8E-15 1E-19 180.3 20.1 159 317-507 201-365 (462)
113 cd03821 GT1_Bme6_like This fam 99.6 2.2E-14 4.8E-19 164.5 24.1 173 739-990 201-374 (375)
114 cd03802 GT1_AviGT4_like This f 99.6 1.7E-14 3.8E-19 166.0 23.3 219 211-506 87-309 (335)
115 cd04946 GT1_AmsK_like This fam 99.6 1.9E-14 4.1E-19 173.8 24.5 176 739-990 228-406 (407)
116 cd03816 GT1_ALG1_like This fam 99.6 8.9E-15 1.9E-19 177.1 21.4 143 340-505 231-381 (415)
117 cd03804 GT1_wbaZ_like This fam 99.6 7.8E-15 1.7E-19 171.9 20.1 149 315-507 177-328 (351)
118 cd03809 GT1_mtfB_like This fam 99.6 1E-14 2.3E-19 168.2 20.1 273 568-990 87-364 (365)
119 cd03819 GT1_WavL_like This fam 99.6 2.9E-14 6.2E-19 165.6 23.2 269 568-980 80-349 (355)
120 cd03822 GT1_ecORF704_like This 99.6 9E-14 1.9E-18 160.5 26.6 180 739-993 183-365 (366)
121 PLN02501 digalactosyldiacylgly 99.6 9.8E-15 2.1E-19 180.1 18.6 239 211-508 434-684 (794)
122 cd03825 GT1_wcfI_like This fam 99.6 3.7E-14 8.1E-19 164.7 22.5 181 312-525 159-350 (365)
123 cd03801 GT1_YqgM_like This fam 99.6 8.3E-14 1.8E-18 157.9 24.3 283 568-993 87-373 (374)
124 cd03798 GT1_wlbH_like This fam 99.6 9.3E-14 2E-18 158.4 24.1 282 568-995 95-376 (377)
125 TIGR02918 accessory Sec system 99.6 1.1E-13 2.5E-18 171.2 26.5 170 741-993 319-497 (500)
126 cd03799 GT1_amsK_like This is 99.6 1.6E-13 3.4E-18 158.9 25.8 264 568-987 81-353 (355)
127 cd03793 GT1_Glycogen_synthase_ 99.6 5E-14 1.1E-18 172.6 22.6 203 739-994 295-585 (590)
128 cd03807 GT1_WbnK_like This fam 99.6 2.8E-13 6E-18 154.8 27.4 172 739-993 191-364 (365)
129 cd04949 GT1_gtfA_like This fam 99.6 1E-13 2.3E-18 163.5 23.5 265 568-987 101-370 (372)
130 PRK15490 Vi polysaccharide bio 99.6 8.1E-14 1.8E-18 170.8 23.0 177 739-995 396-575 (578)
131 PRK15179 Vi polysaccharide bio 99.6 4.2E-14 9E-19 179.7 21.3 174 739-993 515-691 (694)
132 TIGR03087 stp1 sugar transfera 99.6 5E-14 1.1E-18 168.9 20.0 180 312-525 196-382 (397)
133 cd03817 GT1_UGDG_like This fam 99.6 1.3E-13 2.7E-18 158.5 22.5 163 739-981 200-362 (374)
134 cd03820 GT1_amsD_like This fam 99.6 2.1E-14 4.5E-19 162.6 15.6 172 739-990 176-347 (348)
135 cd03814 GT1_like_2 This family 99.6 2.3E-13 4.9E-18 156.8 22.4 169 739-993 195-363 (364)
136 PRK09922 UDP-D-galactose:(gluc 99.6 1.8E-13 3.8E-18 162.1 22.0 173 740-996 179-356 (359)
137 PLN02275 transferase, transfer 99.6 2.6E-14 5.7E-19 170.4 15.0 161 314-503 188-371 (371)
138 PHA01630 putative group 1 glyc 99.5 1.1E-13 2.4E-18 163.1 17.8 183 740-995 141-330 (331)
139 PF00534 Glycos_transf_1: Glyc 99.5 2.7E-14 5.8E-19 150.5 10.6 152 339-515 13-168 (172)
140 cd03794 GT1_wbuB_like This fam 99.5 6.1E-13 1.3E-17 153.0 22.5 277 568-989 101-393 (394)
141 cd03808 GT1_cap1E_like This fa 99.5 1.3E-12 2.7E-17 148.8 23.4 173 739-990 186-358 (359)
142 cd03823 GT1_ExpE7_like This fa 99.5 3.7E-12 8E-17 146.2 25.7 166 739-991 189-355 (359)
143 cd03795 GT1_like_4 This family 99.5 2.3E-12 4.9E-17 149.4 23.0 157 739-977 189-347 (357)
144 PLN02151 trehalose-phosphatase 99.5 5.1E-14 1.1E-18 165.1 8.2 85 1372-1460 75-161 (354)
145 PRK10125 putative glycosyl tra 99.5 1.6E-12 3.5E-17 157.2 21.1 162 739-994 239-403 (405)
146 PRK05749 3-deoxy-D-manno-octul 99.5 4E-12 8.7E-17 154.0 24.0 261 212-523 125-405 (425)
147 cd04955 GT1_like_6 This family 99.5 4E-12 8.7E-17 147.9 23.0 169 741-993 193-362 (363)
148 cd03811 GT1_WabH_like This fam 99.4 6.1E-12 1.3E-16 142.5 21.7 217 568-879 83-300 (353)
149 COG0297 GlgA Glycogen synthase 99.4 5.4E-12 1.2E-16 154.2 22.1 262 211-508 130-445 (487)
150 cd03802 GT1_AviGT4_like This f 99.4 8.2E-12 1.8E-16 143.9 22.4 161 741-991 171-332 (335)
151 PF00534 Glycos_transf_1: Glyc 99.4 7.2E-13 1.6E-17 139.7 12.3 153 738-968 12-165 (172)
152 cd03804 GT1_wbaZ_like This fam 99.4 1.6E-12 3.6E-17 152.3 16.2 155 741-988 195-349 (351)
153 cd03825 GT1_wcfI_like This fam 99.4 5.1E-12 1.1E-16 146.9 19.6 171 739-995 189-364 (365)
154 cd03816 GT1_ALG1_like This fam 99.4 1.5E-12 3.1E-17 157.9 14.4 173 739-987 230-409 (415)
155 PLN03017 trehalose-phosphatase 99.4 7.2E-13 1.6E-17 156.0 8.1 107 1345-1460 66-174 (366)
156 TIGR03087 stp1 sugar transfera 99.4 1.6E-11 3.5E-16 147.4 18.8 167 739-993 222-394 (397)
157 PLN02580 trehalose-phosphatase 99.3 1.2E-12 2.6E-17 155.3 8.4 97 15-115 98-194 (384)
158 PLN02501 digalactosyldiacylgly 99.3 1E-11 2.2E-16 153.9 15.9 160 742-992 547-706 (794)
159 PLN02151 trehalose-phosphatase 99.3 2.9E-12 6.3E-17 150.5 9.2 95 16-114 78-172 (354)
160 cd04950 GT1_like_1 Glycosyltra 99.3 1.3E-10 2.8E-15 138.9 23.0 247 211-525 102-357 (373)
161 KOG1111|consensus 99.3 9.2E-12 2E-16 142.6 11.7 176 301-504 158-334 (426)
162 PLN03017 trehalose-phosphatase 99.3 8.9E-12 1.9E-16 146.9 9.5 97 15-115 90-186 (366)
163 PLN02846 digalactosyldiacylgly 99.3 8.4E-11 1.8E-15 143.6 17.5 164 741-995 228-391 (462)
164 COG1877 OtsB Trehalose-6-phosp 99.3 1.1E-11 2.3E-16 141.0 8.8 101 27-128 8-108 (266)
165 PLN02275 transferase, transfer 99.2 2.3E-11 5E-16 145.3 10.4 115 740-879 212-346 (371)
166 PRK05749 3-deoxy-D-manno-octul 99.2 1.1E-09 2.4E-14 132.8 23.7 182 739-996 231-420 (425)
167 COG0438 RfaG Glycosyltransfera 99.2 6.4E-10 1.4E-14 124.0 19.4 171 313-510 173-347 (381)
168 PLN02605 monogalactosyldiacylg 99.2 3.4E-09 7.4E-14 127.2 25.1 187 271-509 150-351 (382)
169 PF02358 Trehalose_PPase: Treh 99.2 2E-11 4.2E-16 137.2 5.4 85 42-126 1-85 (235)
170 PRK10187 trehalose-6-phosphate 99.2 7.5E-11 1.6E-15 135.2 9.8 93 38-130 14-106 (266)
171 COG0297 GlgA Glycogen synthase 99.2 2.4E-09 5.2E-14 131.3 23.3 323 567-997 131-479 (487)
172 TIGR00685 T6PP trehalose-phosp 99.2 6.4E-11 1.4E-15 134.0 8.8 81 36-116 1-81 (244)
173 KOG0853|consensus 99.1 2.6E-09 5.6E-14 129.6 21.2 231 267-525 205-453 (495)
174 COG1877 OtsB Trehalose-6-phosp 99.1 8.1E-11 1.8E-15 133.9 7.4 69 1392-1460 15-83 (266)
175 TIGR00685 T6PP trehalose-phosp 99.1 1.1E-10 2.5E-15 131.9 6.6 66 1394-1459 2-67 (244)
176 PF02358 Trehalose_PPase: Treh 99.1 5.3E-11 1.1E-15 133.8 3.7 62 1399-1460 1-62 (235)
177 KOG1111|consensus 99.0 8.2E-10 1.8E-14 126.9 10.6 118 739-881 193-310 (426)
178 cd01635 Glycosyltransferase_GT 99.0 1.8E-08 4E-13 108.3 18.4 111 346-481 109-220 (229)
179 cd04950 GT1_like_1 Glycosyltra 99.0 5.9E-09 1.3E-13 124.7 14.8 164 739-995 203-371 (373)
180 COG0438 RfaG Glycosyltransfera 98.9 5.2E-08 1.1E-12 108.8 19.4 178 741-995 199-376 (381)
181 PF08282 Hydrolase_3: haloacid 98.9 1.9E-09 4.1E-14 119.4 7.3 99 41-147 1-102 (254)
182 KOG0853|consensus 98.9 5.4E-08 1.2E-12 118.3 19.7 193 739-996 271-468 (495)
183 cd03786 GT1_UDP-GlcNAc_2-Epime 98.9 1.3E-07 2.8E-12 111.7 22.0 239 211-509 88-341 (363)
184 PRK10530 pyridoxal phosphate ( 98.9 3E-09 6.4E-14 121.2 7.8 84 40-130 5-93 (272)
185 cd03785 GT1_MurG MurG is an N- 98.9 8.3E-08 1.8E-12 112.6 19.9 166 312-513 152-332 (350)
186 PRK15126 thiamin pyrimidine py 98.9 4.5E-09 9.8E-14 120.4 8.4 85 40-130 4-91 (272)
187 PRK10513 sugar phosphate phosp 98.9 4.1E-09 9E-14 120.3 8.0 85 40-130 5-96 (270)
188 PRK10976 putative hydrolase; P 98.8 6.8E-09 1.5E-13 118.4 8.5 85 40-130 4-91 (266)
189 PLN02605 monogalactosyldiacylg 98.8 7.2E-08 1.6E-12 115.9 17.7 171 739-992 204-378 (382)
190 TIGR00099 Cof-subfamily Cof su 98.8 5.9E-09 1.3E-13 118.3 7.9 93 40-140 1-96 (256)
191 COG0561 Cof Predicted hydrolas 98.8 5.6E-09 1.2E-13 119.0 7.6 85 39-130 4-91 (264)
192 TIGR00236 wecB UDP-N-acetylglu 98.8 1.5E-07 3.2E-12 112.1 20.0 239 211-507 86-336 (365)
193 PRK00726 murG undecaprenyldiph 98.8 2.6E-07 5.6E-12 109.4 21.1 166 312-515 154-334 (357)
194 TIGR01133 murG undecaprenyldip 98.8 2.7E-07 5.8E-12 108.3 19.7 162 315-512 153-328 (348)
195 PRK03669 mannosyl-3-phosphogly 98.7 1.9E-08 4.2E-13 115.4 8.8 89 36-130 5-103 (271)
196 PRK13609 diacylglycerol glucos 98.7 1.4E-06 3.1E-11 104.2 24.9 138 340-512 201-345 (380)
197 PTZ00174 phosphomannomutase; P 98.7 2.7E-08 5.9E-13 112.9 7.3 79 39-123 6-88 (247)
198 PF13692 Glyco_trans_1_4: Glyc 98.7 3.6E-08 7.9E-13 100.0 7.3 128 341-504 2-134 (135)
199 TIGR01484 HAD-SF-IIB HAD-super 98.7 2.7E-08 5.9E-13 108.9 6.6 76 40-120 1-76 (204)
200 PRK10187 trehalose-6-phosphate 98.7 3.6E-08 7.9E-13 113.3 7.7 63 1395-1457 14-76 (266)
201 PRK01158 phosphoglycolate phos 98.7 2.6E-08 5.7E-13 110.8 6.3 77 40-123 5-86 (230)
202 PLN02423 phosphomannomutase 98.6 6.7E-08 1.4E-12 109.8 8.1 89 35-130 4-100 (245)
203 KOG1387|consensus 98.6 3.2E-06 7E-11 97.2 21.3 194 739-999 267-462 (465)
204 PLN02887 hydrolase family prot 98.6 6.5E-08 1.4E-12 121.4 7.9 85 40-130 310-406 (580)
205 PRK00025 lpxB lipid-A-disaccha 98.6 4.5E-06 9.8E-11 99.7 22.0 140 340-513 185-349 (380)
206 PRK13608 diacylglycerol glucos 98.5 7.4E-06 1.6E-10 99.1 22.9 137 341-512 203-345 (391)
207 TIGR01487 SPP-like sucrose-pho 98.5 1.2E-07 2.6E-12 105.0 6.6 69 40-114 3-73 (215)
208 TIGR01482 SPP-subfamily Sucros 98.5 1.5E-07 3.3E-12 104.3 5.9 68 41-114 1-70 (225)
209 TIGR02461 osmo_MPG_phos mannos 98.5 2.2E-07 4.9E-12 104.3 6.9 84 40-130 1-101 (225)
210 KOG1387|consensus 98.4 5.8E-06 1.3E-10 95.2 17.0 303 177-525 122-444 (465)
211 PRK14502 bifunctional mannosyl 98.4 4.2E-07 9.2E-12 114.2 8.5 72 38-115 416-489 (694)
212 TIGR01486 HAD-SF-IIB-MPGP mann 98.4 3.6E-07 7.8E-12 104.1 6.3 85 40-130 1-94 (256)
213 cd03785 GT1_MurG MurG is an N- 98.4 1.9E-05 4.1E-10 92.8 20.9 164 739-983 179-345 (350)
214 PF13692 Glyco_trans_1_4: Glyc 98.4 9.2E-07 2E-11 89.7 8.5 99 742-874 3-103 (135)
215 cd03786 GT1_UDP-GlcNAc_2-Epime 98.4 3E-05 6.4E-10 91.8 21.6 106 739-875 197-305 (363)
216 PRK00192 mannosyl-3-phosphogly 98.3 5.4E-07 1.2E-11 103.7 6.5 69 40-114 6-76 (273)
217 PRK13609 diacylglycerol glucos 98.3 7E-05 1.5E-09 89.8 24.7 168 741-995 203-371 (380)
218 TIGR02463 MPGP_rel mannosyl-3- 98.3 7.6E-07 1.6E-11 98.9 6.5 68 40-113 1-71 (221)
219 PRK09814 beta-1,6-galactofuran 98.3 2.3E-05 4.9E-10 92.9 19.2 218 210-502 63-297 (333)
220 PRK00726 murG undecaprenyldiph 98.3 7.2E-06 1.6E-10 97.2 14.8 172 739-993 181-355 (357)
221 TIGR03713 acc_sec_asp1 accesso 98.3 5.5E-05 1.2E-09 94.9 22.7 261 182-507 201-490 (519)
222 smart00775 LNS2 LNS2 domain. T 98.2 1.2E-06 2.7E-11 93.2 5.5 71 40-111 1-88 (157)
223 TIGR02094 more_P_ylases alpha- 98.2 2.9E-05 6.3E-10 98.7 18.5 148 340-503 388-554 (601)
224 TIGR01133 murG undecaprenyldip 98.2 1.6E-05 3.4E-10 93.4 14.4 167 739-987 177-346 (348)
225 PRK12702 mannosyl-3-phosphogly 98.2 2.5E-06 5.3E-11 98.4 7.2 69 40-115 3-74 (302)
226 TIGR00236 wecB UDP-N-acetylglu 98.2 0.0001 2.2E-09 88.0 21.0 103 741-874 198-301 (365)
227 cd01635 Glycosyltransferase_GT 98.2 6.1E-06 1.3E-10 88.8 9.6 109 746-879 109-218 (229)
228 PRK13608 diacylglycerol glucos 98.1 2.6E-05 5.7E-10 94.4 14.3 169 741-995 203-371 (391)
229 TIGR03713 acc_sec_asp1 accesso 98.0 8E-05 1.7E-09 93.4 16.9 152 739-965 319-492 (519)
230 TIGR01485 SPP_plant-cyano sucr 98.0 6.3E-06 1.4E-10 93.6 6.5 74 38-114 1-78 (249)
231 TIGR00215 lpxB lipid-A-disacch 98.0 0.00028 6.2E-09 85.5 19.7 135 339-506 189-348 (385)
232 TIGR02471 sucr_syn_bact_C sucr 97.9 6.4E-06 1.4E-10 92.7 4.1 66 40-113 1-70 (236)
233 TIGR02094 more_P_ylases alpha- 97.9 0.00037 8.1E-09 88.8 18.3 125 738-878 386-514 (601)
234 PRK00025 lpxB lipid-A-disaccha 97.8 0.00026 5.6E-09 84.7 14.8 103 739-875 184-289 (380)
235 PF05693 Glycogen_syn: Glycoge 97.7 0.00022 4.7E-09 88.8 12.8 118 830-994 462-580 (633)
236 PF13524 Glyco_trans_1_2: Glyc 97.6 9.9E-05 2.1E-09 70.8 6.5 79 440-525 1-82 (92)
237 TIGR01689 EcbF-BcbF capsule bi 97.5 0.00014 3E-09 75.0 5.8 51 40-91 3-54 (126)
238 PLN02382 probable sucrose-phos 97.5 0.00018 3.9E-09 88.0 7.6 78 33-114 4-86 (413)
239 PF05693 Glycogen_syn: Glycoge 97.4 0.00099 2.2E-08 83.1 12.6 82 430-516 462-558 (633)
240 cd04299 GT1_Glycogen_Phosphory 97.3 0.01 2.2E-07 77.6 21.0 131 343-489 480-617 (778)
241 PRK09814 beta-1,6-galactofuran 97.3 0.0095 2E-07 70.8 18.6 54 820-879 209-273 (333)
242 PF13524 Glyco_trans_1_2: Glyc 97.3 0.0006 1.3E-08 65.4 7.0 92 840-991 1-92 (92)
243 cd01427 HAD_like Haloacid deha 97.2 0.00035 7.5E-09 69.5 4.9 56 40-96 1-59 (139)
244 TIGR02919 accessory Sec system 97.2 0.0016 3.4E-08 80.4 11.4 122 357-508 291-414 (438)
245 TIGR01684 viral_ppase viral ph 97.2 0.00049 1.1E-08 79.7 6.4 69 37-109 125-198 (301)
246 cd04299 GT1_Glycogen_Phosphory 97.1 0.039 8.4E-07 72.4 22.9 125 738-878 475-603 (778)
247 COG3769 Predicted hydrolase (H 97.1 0.00081 1.8E-08 74.0 6.4 74 35-115 4-80 (274)
248 TIGR00215 lpxB lipid-A-disacch 97.0 0.01 2.2E-07 72.2 15.5 103 739-874 189-294 (385)
249 PRK01158 phosphoglycolate phos 96.9 0.0014 3E-08 73.1 6.2 54 1397-1456 5-61 (230)
250 TIGR01487 SPP-like sucrose-pho 96.8 0.002 4.4E-08 71.5 6.0 53 1397-1455 3-58 (215)
251 PHA03398 viral phosphatase sup 96.7 0.0026 5.6E-08 73.9 6.4 54 38-95 128-182 (303)
252 TIGR01672 AphA HAD superfamily 96.6 0.0044 9.6E-08 70.6 7.2 58 29-87 54-140 (237)
253 TIGR01670 YrbI-phosphatas 3-de 96.6 0.0017 3.6E-08 69.0 3.5 54 40-96 3-63 (154)
254 TIGR01662 HAD-SF-IIIA HAD-supe 96.5 0.0029 6.3E-08 64.7 4.5 47 40-87 2-51 (132)
255 PLN02423 phosphomannomutase 96.5 0.0054 1.2E-07 70.1 7.0 58 1391-1455 3-60 (245)
256 TIGR00213 GmhB_yaeD D,D-heptos 96.4 0.0025 5.5E-08 68.8 3.8 47 40-87 3-52 (176)
257 PLN02645 phosphoglycolate phos 96.3 0.0056 1.2E-07 72.4 6.5 61 17-90 13-73 (311)
258 PF05116 S6PP: Sucrose-6F-phos 96.3 0.0026 5.7E-08 72.7 3.5 70 37-112 1-74 (247)
259 PRK15126 thiamin pyrimidine py 96.3 0.006 1.3E-07 70.2 6.3 49 1397-1451 4-52 (272)
260 TIGR01457 HAD-SF-IIA-hyp2 HAD- 96.2 0.0052 1.1E-07 70.3 5.2 49 40-95 3-54 (249)
261 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.2 0.0044 9.5E-08 71.3 4.6 48 40-90 3-50 (257)
262 TIGR01681 HAD-SF-IIIC HAD-supe 96.2 0.0072 1.6E-07 62.3 5.6 55 40-95 2-64 (128)
263 cd01427 HAD_like Haloacid deha 96.2 0.0056 1.2E-07 60.8 4.6 57 1397-1454 1-60 (139)
264 PRK10513 sugar phosphate phosp 96.2 0.0075 1.6E-07 69.2 6.2 49 1397-1451 5-53 (270)
265 PRK10976 putative hydrolase; P 96.2 0.0078 1.7E-07 68.9 6.3 49 1397-1451 4-52 (266)
266 TIGR01485 SPP_plant-cyano sucr 96.1 0.0075 1.6E-07 68.7 5.8 58 1395-1455 1-61 (249)
267 PTZ00174 phosphomannomutase; P 96.1 0.0096 2.1E-07 68.0 6.4 52 1397-1454 7-58 (247)
268 TIGR01664 DNA-3'-Pase DNA 3'-p 96.1 0.0099 2.1E-07 64.1 6.1 47 40-87 15-68 (166)
269 COG0561 Cof Predicted hydrolas 95.9 0.012 2.5E-07 67.5 6.2 51 1396-1452 4-54 (264)
270 PRK10530 pyridoxal phosphate ( 95.9 0.012 2.5E-07 67.5 5.9 49 1397-1451 5-53 (272)
271 TIGR02919 accessory Sec system 95.9 0.067 1.4E-06 66.3 12.8 122 757-964 291-414 (438)
272 COG1519 KdtA 3-deoxy-D-manno-o 95.8 0.37 8.1E-06 58.7 18.4 218 261-524 166-404 (419)
273 PRK03669 mannosyl-3-phosphogly 95.8 0.016 3.4E-07 67.0 6.6 56 1394-1455 6-64 (271)
274 COG1519 KdtA 3-deoxy-D-manno-o 95.8 1.5 3.3E-05 53.6 23.1 164 741-980 231-404 (419)
275 PRK11009 aphA acid phosphatase 95.8 0.018 3.9E-07 65.7 6.7 57 30-87 55-140 (237)
276 TIGR01656 Histidinol-ppas hist 95.7 0.0091 2E-07 62.7 3.8 47 40-87 2-53 (147)
277 TIGR01689 EcbF-BcbF capsule bi 95.5 0.025 5.4E-07 58.5 6.0 52 1397-1449 3-55 (126)
278 PRK00192 mannosyl-3-phosphogly 95.4 0.023 4.9E-07 65.7 6.2 50 1397-1452 6-55 (273)
279 PRK09484 3-deoxy-D-manno-octul 95.4 0.011 2.4E-07 64.5 3.4 58 38-96 21-83 (183)
280 TIGR01452 PGP_euk phosphoglyco 95.3 0.018 3.8E-07 67.0 4.9 43 40-89 4-46 (279)
281 TIGR01261 hisB_Nterm histidino 95.3 0.015 3.2E-07 62.5 3.8 47 39-86 2-54 (161)
282 PRK10444 UMP phosphatase; Prov 95.3 0.019 4.2E-07 65.9 5.0 45 40-91 3-47 (248)
283 PF08645 PNK3P: Polynucleotide 95.2 0.02 4.3E-07 61.4 4.2 46 40-86 2-54 (159)
284 smart00775 LNS2 LNS2 domain. T 95.1 0.032 6.9E-07 59.8 5.5 51 1397-1448 1-57 (157)
285 KOG3189|consensus 94.9 0.036 7.9E-07 60.5 5.1 81 33-120 6-90 (252)
286 PF13344 Hydrolase_6: Haloacid 94.8 0.026 5.6E-07 56.0 3.8 40 41-87 1-40 (101)
287 PF08235 LNS2: LNS2 (Lipin/Ned 94.8 0.03 6.6E-07 59.9 4.5 52 40-92 1-58 (157)
288 TIGR01662 HAD-SF-IIIA HAD-supe 94.7 0.041 9E-07 56.3 5.1 47 1397-1444 2-51 (132)
289 PHA02530 pseT polynucleotide k 94.7 0.059 1.3E-06 62.9 6.9 57 38-95 158-221 (300)
290 PRK12702 mannosyl-3-phosphogly 94.4 0.067 1.5E-06 62.6 6.4 53 1397-1455 3-58 (302)
291 TIGR01533 lipo_e_P4 5'-nucleot 94.3 0.058 1.3E-06 62.6 5.6 54 36-90 73-147 (266)
292 TIGR01675 plant-AP plant acid 94.3 0.082 1.8E-06 60.0 6.5 54 36-90 75-149 (229)
293 TIGR01668 YqeG_hyp_ppase HAD s 94.2 0.1 2.2E-06 56.4 6.8 44 39-87 26-69 (170)
294 TIGR01460 HAD-SF-IIA Haloacid 94.1 0.059 1.3E-06 61.2 5.0 48 41-95 1-51 (236)
295 TIGR01663 PNK-3'Pase polynucle 94.0 0.086 1.9E-06 66.6 6.7 51 36-87 166-223 (526)
296 PRK06769 hypothetical protein; 93.9 0.053 1.1E-06 58.8 4.0 47 40-87 6-54 (173)
297 PF05116 S6PP: Sucrose-6F-phos 93.9 0.036 7.7E-07 63.6 2.8 53 1395-1453 2-54 (247)
298 PLN02887 hydrolase family prot 93.8 0.09 1.9E-06 67.2 6.3 50 1397-1452 310-359 (580)
299 TIGR00213 GmhB_yaeD D,D-heptos 93.8 0.051 1.1E-06 58.8 3.6 47 1397-1444 3-52 (176)
300 PRK05446 imidazole glycerol-ph 93.8 0.075 1.6E-06 64.0 5.2 47 39-86 3-55 (354)
301 TIGR01684 viral_ppase viral ph 93.7 0.11 2.3E-06 60.9 6.0 54 1395-1452 126-180 (301)
302 PRK08942 D,D-heptose 1,7-bisph 93.3 0.076 1.6E-06 57.6 4.0 47 40-87 5-55 (181)
303 TIGR01672 AphA HAD superfamily 93.3 0.16 3.5E-06 58.1 6.6 80 1375-1456 44-159 (237)
304 TIGR01426 MGT glycosyltransfer 93.2 8.1 0.00017 46.9 21.6 91 421-525 278-377 (392)
305 PF03767 Acid_phosphat_B: HAD 93.0 0.038 8.3E-07 62.7 1.2 54 36-90 70-144 (229)
306 TIGR01681 HAD-SF-IIIC HAD-supe 93.0 0.17 3.8E-06 52.1 5.9 55 1397-1452 2-64 (128)
307 PRK14502 bifunctional mannosyl 92.9 0.27 5.8E-06 63.4 8.3 51 1395-1451 416-466 (694)
308 TIGR01656 Histidinol-ppas hist 92.8 0.14 3E-06 53.8 4.9 47 1397-1444 2-53 (147)
309 TIGR01459 HAD-SF-IIA-hyp4 HAD- 92.6 0.17 3.6E-06 57.7 5.5 42 40-88 10-51 (242)
310 PF13844 Glyco_transf_41: Glyc 92.5 1.5 3.4E-05 54.7 14.0 101 739-860 283-383 (468)
311 COG1778 Low specificity phosph 92.1 0.18 3.8E-06 53.8 4.5 57 40-97 10-71 (170)
312 TIGR01670 YrbI-phosphatas 3-de 92.1 0.13 2.9E-06 54.6 3.7 53 1397-1452 3-62 (154)
313 TIGR02726 phenyl_P_delta pheny 91.7 0.18 3.8E-06 54.9 4.2 60 40-100 9-73 (169)
314 PLN02382 probable sucrose-phos 91.7 0.34 7.3E-06 59.8 7.1 61 1391-1455 5-69 (413)
315 TIGR01664 DNA-3'-Pase DNA 3'-p 90.5 0.38 8.2E-06 52.0 5.3 47 1397-1444 15-68 (166)
316 PRK06769 hypothetical protein; 90.5 0.35 7.5E-06 52.5 5.0 47 1397-1444 6-54 (173)
317 PHA02530 pseT polynucleotide k 90.4 0.53 1.1E-05 55.1 6.8 55 1395-1450 158-219 (300)
318 TIGR01484 HAD-SF-IIB HAD-super 90.3 0.31 6.7E-06 53.6 4.5 33 1397-1433 1-33 (204)
319 PRK09484 3-deoxy-D-manno-octul 90.1 0.2 4.4E-06 54.8 2.8 57 1395-1452 21-82 (183)
320 TIGR01261 hisB_Nterm histidino 89.8 0.28 6E-06 52.8 3.5 46 1397-1443 3-54 (161)
321 PF09419 PGP_phosphatase: Mito 89.7 0.44 9.5E-06 51.8 4.9 71 11-86 13-86 (168)
322 TIGR01680 Veg_Stor_Prot vegeta 89.3 0.84 1.8E-05 53.1 7.0 52 36-88 99-172 (275)
323 TIGR03492 conserved hypothetic 89.1 4.7 0.0001 49.6 13.8 138 343-507 209-366 (396)
324 PHA03398 viral phosphatase sup 88.7 0.7 1.5E-05 54.3 5.9 53 1396-1452 129-182 (303)
325 PRK11009 aphA acid phosphatase 88.3 0.94 2E-05 51.9 6.5 79 1375-1455 44-158 (237)
326 KOG3189|consensus 87.7 0.95 2.1E-05 49.9 5.7 58 1391-1455 7-64 (252)
327 TIGR02253 CTE7 HAD superfamily 87.5 0.89 1.9E-05 50.4 5.7 13 40-52 4-16 (221)
328 KOG2941|consensus 87.5 6.7 0.00014 47.0 12.7 137 339-504 253-404 (444)
329 TIGR01685 MDP-1 magnesium-depe 87.5 0.87 1.9E-05 49.8 5.4 55 40-95 4-80 (174)
330 TIGR01549 HAD-SF-IA-v1 haloaci 87.3 0.65 1.4E-05 48.5 4.2 33 62-95 66-98 (154)
331 COG0647 NagD Predicted sugar p 87.2 0.64 1.4E-05 54.2 4.4 41 40-87 10-50 (269)
332 PLN02645 phosphoglycolate phos 87.2 1.5 3.3E-05 52.1 7.7 57 1375-1444 14-70 (311)
333 PRK09552 mtnX 2-hydroxy-3-keto 87.1 0.97 2.1E-05 50.6 5.7 33 60-93 74-106 (219)
334 TIGR01533 lipo_e_P4 5'-nucleot 87.1 1.2 2.6E-05 51.9 6.6 64 1380-1446 62-146 (266)
335 COG0241 HisB Histidinol phosph 86.9 0.56 1.2E-05 51.6 3.5 48 38-86 5-56 (181)
336 COG2179 Predicted hydrolase of 86.5 1.5 3.3E-05 47.4 6.3 51 40-95 30-80 (175)
337 cd03784 GT1_Gtf_like This fami 86.3 33 0.00072 41.6 18.8 73 420-504 290-371 (401)
338 PF08645 PNK3P: Polynucleotide 86.3 0.76 1.7E-05 49.4 4.1 44 1397-1441 2-52 (159)
339 smart00577 CPDc catalytic doma 86.3 1.5 3.2E-05 46.4 6.2 56 38-95 2-78 (148)
340 PRK14988 GMP/IMP nucleotidase; 86.2 1.1 2.3E-05 50.6 5.5 34 61-95 94-127 (224)
341 TIGR03568 NeuC_NnaA UDP-N-acet 86.0 65 0.0014 39.3 20.9 72 420-504 264-338 (365)
342 TIGR01456 CECR5 HAD-superfamil 86.0 0.93 2E-05 54.1 5.1 48 40-93 2-55 (321)
343 TIGR01458 HAD-SF-IIA-hyp3 HAD- 85.9 0.86 1.9E-05 52.6 4.6 48 1397-1447 3-50 (257)
344 TIGR01668 YqeG_hyp_ppase HAD s 85.8 1.4 3E-05 47.7 5.9 43 1397-1444 27-69 (170)
345 PRK05446 imidazole glycerol-ph 85.6 0.93 2E-05 54.9 4.8 46 1397-1443 4-55 (354)
346 PRK08942 D,D-heptose 1,7-bisph 83.7 1 2.3E-05 48.8 3.8 47 1397-1444 5-55 (181)
347 TIGR01686 FkbH FkbH-like domai 83.4 1.6 3.5E-05 52.0 5.5 56 40-96 5-66 (320)
348 PRK13582 thrH phosphoserine ph 83.3 1.2 2.6E-05 48.8 4.2 32 62-95 70-101 (205)
349 PF12689 Acid_PPase: Acid Phos 83.1 1.6 3.4E-05 47.7 4.7 56 40-96 5-81 (169)
350 PRK13582 thrH phosphoserine ph 82.4 1.4 3.1E-05 48.3 4.2 37 1417-1455 68-107 (205)
351 PRK09552 mtnX 2-hydroxy-3-keto 82.2 2.5 5.5E-05 47.3 6.2 36 1416-1452 73-108 (219)
352 COG0763 LpxB Lipid A disacchar 82.0 39 0.00085 41.4 16.2 232 211-506 85-345 (381)
353 TIGR01452 PGP_euk phosphoglyco 81.9 1.6 3.5E-05 50.9 4.6 41 1397-1444 4-44 (279)
354 PF02684 LpxB: Lipid-A-disacch 81.1 65 0.0014 39.7 18.0 240 211-508 82-343 (373)
355 PRK08238 hypothetical protein; 81.1 2.9 6.2E-05 52.8 6.7 46 61-107 73-120 (479)
356 TIGR03492 conserved hypothetic 80.9 21 0.00046 44.0 14.0 107 743-875 209-324 (396)
357 PF09419 PGP_phosphatase: Mito 80.7 3.6 7.8E-05 44.9 6.4 59 1397-1459 43-112 (168)
358 PF13844 Glyco_transf_41: Glyc 80.0 17 0.00036 45.8 12.7 109 339-474 283-391 (468)
359 PF13439 Glyco_transf_4: Glyco 79.4 0.34 7.3E-06 50.3 -1.9 92 211-327 80-177 (177)
360 PTZ00445 p36-lilke protein; Pr 79.4 3.7 8E-05 46.3 6.1 68 18-87 24-101 (219)
361 COG1778 Low specificity phosph 79.3 1.7 3.7E-05 46.6 3.2 53 1397-1452 10-69 (170)
362 smart00577 CPDc catalytic doma 78.9 4.4 9.6E-05 42.8 6.4 57 1395-1453 2-79 (148)
363 PRK11133 serB phosphoserine ph 76.4 2.3 5E-05 50.9 3.7 16 36-51 108-123 (322)
364 PF13344 Hydrolase_6: Haloacid 75.8 3.9 8.4E-05 40.7 4.6 46 1398-1450 1-49 (101)
365 PF08323 Glyco_transf_5: Starc 75.8 8 0.00017 44.4 7.8 93 190-288 118-232 (245)
366 PF07429 Glyco_transf_56: 4-al 74.1 28 0.0006 42.2 11.6 164 310-499 158-327 (360)
367 COG0707 MurG UDP-N-acetylgluco 73.7 94 0.002 38.1 16.4 83 428-521 243-338 (357)
368 TIGR03333 salvage_mtnX 2-hydro 72.5 6.3 0.00014 44.0 5.7 54 1398-1452 2-104 (214)
369 TIGR03590 PseG pseudaminic aci 71.7 18 0.00039 42.3 9.5 99 740-874 170-268 (279)
370 PRK02797 4-alpha-L-fucosyltran 71.6 1.6E+02 0.0035 35.5 16.9 119 342-483 147-267 (322)
371 PF08235 LNS2: LNS2 (Lipin/Ned 71.3 6 0.00013 42.8 4.9 52 1398-1450 2-59 (157)
372 TIGR01459 HAD-SF-IIA-hyp4 HAD- 70.6 7.4 0.00016 44.4 5.9 42 1397-1445 10-51 (242)
373 KOG2941|consensus 69.9 1.2E+02 0.0025 37.0 15.2 141 740-961 254-405 (444)
374 TIGR01663 PNK-3'Pase polynucle 69.4 5.2 0.00011 51.0 4.7 49 1395-1444 168-223 (526)
375 PF03031 NIF: NLI interacting 69.3 4.3 9.2E-05 43.0 3.4 54 40-95 2-69 (159)
376 TIGR01685 MDP-1 magnesium-depe 68.7 9.7 0.00021 41.8 6.0 56 1397-1453 4-81 (174)
377 TIGR01548 HAD-SF-IA-hyp1 haloa 68.6 2.2 4.7E-05 46.8 1.0 28 40-72 2-29 (197)
378 PF02684 LpxB: Lipid-A-disacch 66.9 26 0.00056 43.1 9.7 97 747-876 192-289 (373)
379 TIGR01426 MGT glycosyltransfer 66.8 96 0.0021 37.7 14.7 45 820-876 277-321 (392)
380 TIGR01990 bPGM beta-phosphoglu 66.4 3.7 8.1E-05 44.0 2.3 29 40-77 1-29 (185)
381 TIGR02250 FCP1_euk FCP1-like p 66.0 9.8 0.00021 40.9 5.3 58 36-95 4-91 (156)
382 COG3769 Predicted hydrolase (H 65.9 11 0.00024 42.7 5.6 58 1392-1456 4-64 (274)
383 TIGR02252 DREG-2 REG-2-like, H 64.8 3.8 8.1E-05 44.9 1.9 30 40-78 2-31 (203)
384 PRK10725 fructose-1-P/6-phosph 64.7 3.2 6.9E-05 44.8 1.3 30 40-78 7-36 (188)
385 TIGR03590 PseG pseudaminic aci 64.7 20 0.00044 41.9 8.0 93 340-463 170-262 (279)
386 TIGR02726 phenyl_P_delta pheny 63.8 7.2 0.00016 42.5 3.8 57 1397-1454 9-70 (169)
387 TIGR02251 HIF-SF_euk Dullard-l 62.9 13 0.00028 40.1 5.5 55 39-95 2-75 (162)
388 PF13579 Glyco_trans_4_4: Glyc 62.1 8.7 0.00019 39.0 3.9 69 211-288 73-146 (160)
389 PF03031 NIF: NLI interacting 61.2 8.5 0.00018 40.8 3.7 54 1397-1452 2-69 (159)
390 TIGR01457 HAD-SF-IIA-hyp2 HAD- 61.2 12 0.00026 43.1 5.2 51 1397-1453 3-55 (249)
391 TIGR01493 HAD-SF-IA-v2 Haloaci 60.9 3.8 8.2E-05 43.8 1.0 27 40-75 1-27 (175)
392 PRK11133 serB phosphoserine ph 59.3 10 0.00022 45.5 4.4 39 1417-1456 181-222 (322)
393 TIGR01675 plant-AP plant acid 58.8 19 0.00042 41.3 6.2 55 1392-1447 74-149 (229)
394 TIGR01993 Pyr-5-nucltdase pyri 58.3 7.5 0.00016 42.0 2.8 13 40-52 2-14 (184)
395 PRK11587 putative phosphatase; 58.2 4.7 0.0001 45.0 1.2 28 40-72 5-32 (218)
396 COG3914 Spy Predicted O-linked 57.2 1.6E+02 0.0035 38.1 14.0 103 739-860 428-530 (620)
397 PRK13288 pyrophosphatase PpaX; 56.7 5.5 0.00012 44.2 1.4 12 40-51 5-16 (214)
398 TIGR01686 FkbH FkbH-like domai 55.9 23 0.00049 42.4 6.5 56 1397-1453 5-66 (320)
399 TIGR01680 Veg_Stor_Prot vegeta 55.7 19 0.00041 42.3 5.5 53 1393-1446 99-173 (275)
400 KOG2116|consensus 55.5 14 0.0003 47.5 4.7 75 40-115 532-616 (738)
401 PRK13222 phosphoglycolate phos 55.1 7.8 0.00017 43.0 2.3 31 40-79 8-38 (226)
402 PRK10563 6-phosphogluconate ph 55.0 8.1 0.00017 43.0 2.4 29 40-77 6-34 (221)
403 PF02350 Epimerase_2: UDP-N-ac 55.0 78 0.0017 38.4 10.9 237 211-505 67-318 (346)
404 PLN02954 phosphoserine phospha 54.8 6.4 0.00014 43.8 1.6 12 40-51 14-25 (224)
405 PF12689 Acid_PPase: Acid Phos 54.5 14 0.00029 40.6 3.9 45 1397-1442 5-69 (169)
406 PRK06698 bifunctional 5'-methy 54.2 6 0.00013 49.6 1.4 63 2-72 203-270 (459)
407 PF06258 Mito_fiss_Elm1: Mitoc 54.1 4.7E+02 0.01 31.6 17.2 9 536-544 289-297 (311)
408 COG0763 LpxB Lipid A disacchar 54.1 38 0.00083 41.5 7.9 93 751-876 201-293 (381)
409 TIGR02009 PGMB-YQAB-SF beta-ph 54.0 6.6 0.00014 42.1 1.5 12 40-51 3-14 (185)
410 TIGR02250 FCP1_euk FCP1-like p 53.3 23 0.0005 38.2 5.4 58 1393-1452 4-91 (156)
411 PRK08238 hypothetical protein; 53.0 20 0.00044 45.4 5.7 39 1412-1451 67-105 (479)
412 PRK10748 flavin mononucleotide 52.3 7.6 0.00016 44.2 1.7 13 40-52 12-24 (238)
413 TIGR00338 serB phosphoserine p 52.1 7.7 0.00017 43.0 1.7 12 40-51 16-27 (219)
414 PRK13223 phosphoglycolate phos 51.9 9.9 0.00022 44.3 2.6 30 40-78 15-44 (272)
415 PHA02597 30.2 hypothetical pro 51.8 7 0.00015 42.7 1.3 13 40-52 4-16 (197)
416 PF07429 Glyco_transf_56: 4-al 51.6 94 0.002 37.9 10.4 114 740-875 184-298 (360)
417 PRK13226 phosphoglycolate phos 51.3 10 0.00022 42.8 2.5 31 40-79 14-44 (229)
418 TIGR02251 HIF-SF_euk Dullard-l 51.1 28 0.00061 37.5 5.7 55 1396-1452 2-75 (162)
419 cd03784 GT1_Gtf_like This fami 50.6 1.9E+02 0.0041 35.1 13.4 45 820-876 290-334 (401)
420 PLN02770 haloacid dehalogenase 50.4 7.8 0.00017 44.4 1.4 28 40-72 24-51 (248)
421 PF06258 Mito_fiss_Elm1: Mitoc 50.4 62 0.0014 38.8 8.9 128 739-876 111-259 (311)
422 PF06888 Put_Phosphatase: Puta 50.1 16 0.00034 42.1 3.8 36 1417-1452 71-107 (234)
423 TIGR01489 DKMTPPase-SF 2,3-dik 49.8 10 0.00023 40.5 2.2 17 38-54 1-17 (188)
424 PLN02410 UDP-glucoronosyl/UDP- 49.5 3.3E+02 0.0072 34.5 15.5 50 945-994 394-449 (451)
425 TIGR01491 HAD-SF-IB-PSPlk HAD- 48.6 9.6 0.00021 41.3 1.7 12 40-51 6-17 (201)
426 PF06888 Put_Phosphatase: Puta 48.1 17 0.00037 41.8 3.6 13 40-52 2-14 (234)
427 PF05152 DUF705: Protein of un 47.9 38 0.00082 40.0 6.3 49 33-85 117-167 (297)
428 COG0560 SerB Phosphoserine pho 47.8 13 0.00028 42.0 2.6 50 1392-1442 2-101 (212)
429 PRK11590 hypothetical protein; 47.8 11 0.00024 42.1 2.0 17 34-50 2-18 (211)
430 COG0816 Predicted endonuclease 47.7 76 0.0016 33.9 8.0 84 746-839 28-111 (141)
431 TIGR02254 YjjG/YfnB HAD superf 47.1 9.4 0.0002 42.2 1.4 13 40-52 3-15 (224)
432 TIGR01490 HAD-SF-IB-hyp1 HAD-s 47.1 8.6 0.00019 42.0 1.0 12 40-51 1-12 (202)
433 PLN02410 UDP-glucoronosyl/UDP- 47.0 1.7E+02 0.0036 37.0 12.3 93 423-523 329-429 (451)
434 TIGR01488 HAD-SF-IB Haloacid D 46.9 8.2 0.00018 41.1 0.8 12 40-51 1-12 (177)
435 TIGR01509 HAD-SF-IA-v3 haloaci 46.3 7.9 0.00017 41.2 0.6 12 40-51 1-12 (183)
436 PRK02797 4-alpha-L-fucosyltran 45.5 89 0.0019 37.6 8.9 113 740-875 145-259 (322)
437 PF03767 Acid_phosphat_B: HAD 44.9 8.8 0.00019 43.9 0.7 53 1393-1447 70-144 (229)
438 TIGR03568 NeuC_NnaA UDP-N-acet 44.7 4.8E+02 0.01 31.9 15.5 37 819-860 263-299 (365)
439 COG5083 SMP2 Uncharacterized p 44.0 23 0.00049 43.7 3.8 78 37-115 374-461 (580)
440 KOG1618|consensus 43.7 28 0.00061 41.5 4.4 43 36-84 33-78 (389)
441 TIGR02245 HAD_IIID1 HAD-superf 43.1 44 0.00095 37.5 5.8 55 1394-1450 20-76 (195)
442 PLN02779 haloacid dehalogenase 43.1 11 0.00023 44.4 1.1 28 40-72 42-70 (286)
443 PRK09449 dUMP phosphatase; Pro 42.4 12 0.00026 41.7 1.3 12 40-51 5-16 (224)
444 PF12710 HAD: haloacid dehalog 42.3 13 0.00028 39.9 1.5 11 41-51 1-11 (192)
445 TIGR01428 HAD_type_II 2-haloal 41.8 14 0.0003 40.4 1.6 12 40-51 3-14 (198)
446 COG0637 Predicted phosphatase/ 40.5 14 0.00031 41.7 1.5 12 40-51 4-15 (221)
447 TIGR02245 HAD_IIID1 HAD-superf 40.3 50 0.0011 37.1 5.6 54 36-91 19-74 (195)
448 COG3660 Predicted nucleoside-d 39.5 2.1E+02 0.0045 33.8 10.3 53 818-878 224-277 (329)
449 COG0707 MurG UDP-N-acetylgluco 38.9 7.6E+02 0.017 30.4 15.9 42 828-878 243-284 (357)
450 COG4641 Uncharacterized protei 38.6 74 0.0016 39.0 7.0 91 429-525 249-347 (373)
451 COG4087 Soluble P-type ATPase 38.4 23 0.0005 37.3 2.5 51 42-100 18-68 (152)
452 COG0241 HisB Histidinol phosph 38.1 30 0.00064 38.4 3.4 47 1395-1442 5-55 (181)
453 COG1011 Predicted hydrolase (H 38.0 17 0.00037 40.3 1.6 15 39-53 5-19 (229)
454 PLN02940 riboflavin kinase 38.0 20 0.00043 44.1 2.3 32 40-80 13-44 (382)
455 COG0647 NagD Predicted sugar p 37.6 35 0.00076 40.1 4.1 48 1397-1451 10-60 (269)
456 PTZ00445 p36-lilke protein; Pr 36.6 41 0.00088 38.3 4.2 90 1332-1444 2-101 (219)
457 TIGR01993 Pyr-5-nucltdase pyri 36.4 20 0.00043 38.7 1.8 12 1397-1408 2-13 (184)
458 TIGR01545 YfhB_g-proteo haloac 35.7 24 0.00051 39.8 2.3 21 34-54 1-21 (210)
459 PRK10725 fructose-1-P/6-phosph 35.6 19 0.00042 38.7 1.5 12 1397-1408 7-18 (188)
460 PLN02448 UDP-glycosyltransfera 34.9 81 0.0018 39.7 7.0 114 422-549 327-454 (459)
461 TIGR02247 HAD-1A3-hyp Epoxide 34.7 20 0.00042 39.6 1.4 12 40-51 4-15 (211)
462 KOG3742|consensus 33.9 61 0.0013 40.3 5.3 47 830-881 493-539 (692)
463 COG2179 Predicted hydrolase of 33.6 95 0.0021 34.2 6.2 60 1395-1459 28-90 (175)
464 PRK01021 lpxB lipid-A-disaccha 33.3 1.3E+03 0.028 30.6 18.6 65 432-507 483-573 (608)
465 COG3882 FkbH Predicted enzyme 32.8 1.1E+02 0.0023 38.8 7.1 60 37-97 221-291 (574)
466 PHA02597 30.2 hypothetical pro 32.3 21 0.00045 39.1 1.1 15 1397-1411 4-18 (197)
467 COG0816 Predicted endonuclease 31.7 1.8E+02 0.004 31.1 7.9 84 346-439 28-111 (141)
468 TIGR02137 HSK-PSP phosphoserin 31.4 22 0.00047 39.9 1.1 12 40-51 3-14 (203)
469 PF08323 Glyco_transf_5: Starc 30.7 81 0.0017 36.3 5.6 91 546-642 119-231 (245)
470 PLN02207 UDP-glycosyltransfera 29.7 3.4E+02 0.0074 34.6 11.2 114 423-550 337-463 (468)
471 TIGR01454 AHBA_synth_RP 3-amin 28.1 63 0.0014 35.5 4.0 36 59-95 74-109 (205)
472 PRK01021 lpxB lipid-A-disaccha 28.1 2.9E+02 0.0063 36.3 10.2 34 832-875 483-516 (608)
473 TIGR01491 HAD-SF-IB-PSPlk HAD- 27.8 60 0.0013 35.2 3.7 36 59-95 79-114 (201)
474 TIGR01525 ATPase-IB_hvy heavy 27.5 82 0.0018 40.7 5.4 58 36-96 362-420 (556)
475 TIGR01511 ATPase-IB1_Cu copper 27.4 65 0.0014 41.7 4.5 57 37-96 384-440 (562)
476 PLN02863 UDP-glucoronosyl/UDP- 26.8 1.2E+03 0.026 29.9 15.3 108 740-875 283-390 (477)
477 TIGR01493 HAD-SF-IA-v2 Haloaci 26.8 29 0.00063 37.0 1.0 15 1397-1411 1-15 (175)
478 PHA03392 egt ecdysteroid UDP-g 26.7 4.5E+02 0.0098 33.8 11.7 92 420-523 348-448 (507)
479 TIGR00661 MJ1255 conserved hyp 26.2 87 0.0019 37.2 5.0 72 424-506 235-315 (321)
480 COG3700 AphA Acid phosphatase 26.1 1.1E+02 0.0024 33.9 5.1 61 30-91 55-144 (237)
481 COG3914 Spy Predicted O-linked 26.1 5.3E+02 0.012 33.7 11.6 109 341-474 430-538 (620)
482 KOG2134|consensus 26.0 63 0.0014 39.7 3.6 46 40-86 77-129 (422)
483 PF08282 Hydrolase_3: haloacid 25.9 37 0.0008 37.6 1.7 11 1398-1408 1-11 (254)
484 PRK09456 ?-D-glucose-1-phospha 25.4 39 0.00084 37.2 1.7 13 40-52 2-14 (199)
485 PF02350 Epimerase_2: UDP-N-ac 25.4 8.5E+02 0.018 29.6 13.2 95 739-860 179-276 (346)
486 PLN02863 UDP-glucoronosyl/UDP- 25.3 6.5E+02 0.014 32.2 12.6 113 421-550 346-469 (477)
487 PRK10748 flavin mononucleotide 25.0 36 0.00079 38.7 1.4 25 1419-1445 115-139 (238)
488 PLN02207 UDP-glycosyltransfera 24.7 8E+02 0.017 31.4 13.2 50 947-996 412-466 (468)
489 PF09949 DUF2183: Uncharacteri 24.3 1.7E+02 0.0036 29.6 5.7 39 357-399 49-87 (100)
490 COG0381 WecB UDP-N-acetylgluco 23.9 1.5E+03 0.032 28.3 21.0 141 341-512 205-348 (383)
491 COG0546 Gph Predicted phosphat 23.7 80 0.0017 35.5 3.8 36 60-96 89-124 (220)
492 PF13419 HAD_2: Haloacid dehal 23.5 76 0.0016 32.8 3.4 35 60-95 77-111 (176)
493 PRK10826 2-deoxyglucose-6-phos 23.0 93 0.002 34.7 4.2 35 60-95 92-126 (222)
494 PRK10563 6-phosphogluconate ph 23.0 44 0.00096 37.1 1.6 12 1397-1408 6-17 (221)
495 PF00343 Phosphorylase: Carboh 22.9 1.1E+03 0.024 31.9 14.0 132 339-481 442-582 (713)
496 PF09949 DUF2183: Uncharacteri 22.8 1.8E+02 0.0039 29.3 5.6 38 757-798 49-86 (100)
497 PRK13288 pyrophosphatase PpaX; 22.7 87 0.0019 34.7 3.8 35 60-95 82-116 (214)
498 TIGR01449 PGP_bact 2-phosphogl 22.6 91 0.002 34.2 4.0 36 59-95 84-119 (213)
499 KOG0925|consensus 22.3 75 0.0016 40.0 3.3 69 1330-1409 388-457 (699)
500 TIGR00099 Cof-subfamily Cof su 22.1 90 0.0019 35.6 3.9 12 1397-1408 1-12 (256)
No 1
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=7.8e-99 Score=900.17 Aligned_cols=389 Identities=37% Similarity=0.646 Sum_probs=366.6
Q ss_pred ccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEE
Q psy775 138 QEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWI 217 (1460)
Q Consensus 138 q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwI 217 (1460)
.+.+.+|++++++++.||+||||++|||+|||+++...|++++|++|++||++||++|++.++ +||+|||
T Consensus 60 ~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~~~~~~~w~~Y~~VN~~FA~~v~~~~~----------~~D~VWV 129 (474)
T PRK10117 60 NITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWEGYLRVNALLADKLLPLLK----------DDDIIWI 129 (474)
T ss_pred CceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCccCcCHHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEE
Confidence 467899999999999999999999999999999999999999999999999999999999875 6999999
Q ss_pred eCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCce
Q psy775 218 HDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCR 297 (1460)
Q Consensus 218 HDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~ 297 (1460)
||||||+||++||++. ++++||||||||||++|+|++||+|++|++|||+||+|||||++|++||++||++++|.+
T Consensus 130 HDYhL~llp~~LR~~~----~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~ 205 (474)
T PRK10117 130 HDYHLLPFASELRKRG----VNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVT 205 (474)
T ss_pred eccHhhHHHHHHHHhC----CCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCc
Confidence 9999999999999875 489999999999999999999999999999999999999999999999999999999987
Q ss_pred ecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch-----hhhc--cCCeEEEEecCccccCCHHHHHHHHHHHHHhC
Q psy775 298 VDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP-----RVID--TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 370 (1460)
Q Consensus 298 ~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~-----~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~ 370 (1460)
...+. .+.++||.++|.++|+|||++.|...+.... .+++ +++++|++|||+||+|||+++|+||++||++|
T Consensus 206 ~~~~~-~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~ 284 (474)
T PRK10117 206 TRSGK-SHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKY 284 (474)
T ss_pred ccCCC-eEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 65433 5678899999999999999999987654221 1222 67999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCC
Q psy775 371 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGM 450 (1460)
Q Consensus 371 P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGf 450 (1460)
|+|++||+|+|+++|||+++++|+++++++++++++||++||+.+|.||+|+++.+++++|.|+|++|||+++||++|||
T Consensus 285 Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGM 364 (474)
T PRK10117 285 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGM 364 (474)
T ss_pred hhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCCCCCC
Q psy775 451 NLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNCPGQS 530 (1460)
Q Consensus 451 nLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~~~~~ 530 (1460)
||||+||+|||.+.++|+||+|||||++++|.+|++|||||++++|+||++||+||.+||+.|++.+++.|.++|
T Consensus 365 NLVAkEyva~q~~~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~d----- 439 (474)
T PRK10117 365 NLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKND----- 439 (474)
T ss_pred ccccchheeeecCCCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCC-----
Confidence 999999999998666899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHhh
Q psy775 531 SLGGNTSAYAQVNQEFADKTIKALQILA 558 (1460)
Q Consensus 531 sl~~~~~~Y~~VNq~fAd~~le~l~~~~ 558 (1460)
+.+ |++.++..++...
T Consensus 440 -----------v~~-W~~~fL~~L~~~~ 455 (474)
T PRK10117 440 -----------INH-WQECFISDLKQIV 455 (474)
T ss_pred -----------HHH-HHHHHHHHHHHhh
Confidence 766 9999999887653
No 2
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=3.8e-96 Score=885.47 Aligned_cols=387 Identities=35% Similarity=0.686 Sum_probs=364.4
Q ss_pred hccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEE
Q psy775 137 LQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVW 216 (1460)
Q Consensus 137 ~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVw 216 (1460)
.+++|.||++++++++.||+||||++|||+|||+++.+.|++++|++|++||++||++|++.++ +||+||
T Consensus 68 ~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~----------~~d~vW 137 (487)
T TIGR02398 68 YKLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERFQFREDDWQVFLKVNRAFAEAACLEAA----------EGATVW 137 (487)
T ss_pred CceeEEEEeCCHHHHHHHHhhhhhccccccccCCccccCcCHHHHHHHHHHHHHHHHHHHHhcC----------CCCEEE
Confidence 4678999999999999999999999999999999999999999999999999999999999874 699999
Q ss_pred EeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCc
Q psy775 217 IHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGC 296 (1460)
Q Consensus 217 IHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~ 296 (1460)
||||||||||++||++.| +++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|.
T Consensus 138 VhDYhL~llp~~LR~~~~----~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~ 213 (487)
T TIGR02398 138 VHDYNLWLVPGYIRQLRP----DLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPL 213 (487)
T ss_pred EecchhhHHHHHHHHhCC----CCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCC
Confidence 999999999999998755 8999999999999999999999999999999999999999999999999999999998
Q ss_pred eecCC-------------------CcEEEECCeEEEEEEeecccCchhhhhhhccc------hhhhc--cCCeEEEEecC
Q psy775 297 RVDRK-------------------NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA------PRVID--TKQKIVLGVDR 349 (1460)
Q Consensus 297 ~~~~~-------------------~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~------~~~~~--~~~kvIL~VgR 349 (1460)
+...+ ...+.++||.++|.++|+|||++.|.+..... ..+++ +++++|++|||
T Consensus 214 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDR 293 (487)
T TIGR02398 214 QTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAER 293 (487)
T ss_pred ccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecc
Confidence 66432 12478999999999999999999998765432 12222 68999999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHH
Q psy775 350 LDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQD 429 (1460)
Q Consensus 350 Ld~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~e 429 (1460)
+|++|||+++|+||++||++||++++|++|+|++.|+++++++|+++++++++++++||++||+.+|.||+++++.++++
T Consensus 294 LDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~ 373 (487)
T TIGR02398 294 VDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYE 373 (487)
T ss_pred cccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHH
Q psy775 430 ELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDE 509 (1460)
Q Consensus 430 eL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~e 509 (1460)
++.+||++||||++||+||||||||+||||||.+. +||||+|||+|+++++.+|++|||||++++|+||++||+||.+|
T Consensus 374 el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~-~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~E 452 (487)
T TIGR02398 374 EVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLL-DGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAE 452 (487)
T ss_pred HHHHHHHhCCEEEECccccccCcchhhHHhhhcCC-CCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999865 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHH
Q psy775 510 RTLRMNYLRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQ 555 (1460)
Q Consensus 510 r~~R~~~l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~ 555 (1460)
|+.|++.++++|.++| +++ |++.++..++
T Consensus 453 r~~R~~~l~~~v~~~d----------------~~~-W~~~fl~~l~ 481 (487)
T TIGR02398 453 QQARMREMFDAVNYYD----------------VQR-WADEFLAAVS 481 (487)
T ss_pred HHHHHHHHHHHHhhCC----------------HHH-HHHHHHHHhh
Confidence 9999999999999999 777 9999998764
No 3
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=1e-94 Score=922.20 Aligned_cols=458 Identities=32% Similarity=0.554 Sum_probs=397.9
Q ss_pred hhccCceeeecCcccccccccccccccccccccCCCCc-----cccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q psy775 136 TLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDR-----AMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADS 210 (1460)
Q Consensus 136 L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~-----~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~ 210 (1460)
+.+++|.|||+++++++.||+||||++|||+|||+++. .+|++.+|++|++||++||++|++.+++
T Consensus 130 ~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~--------- 200 (854)
T PLN02205 130 LETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINP--------- 200 (854)
T ss_pred hcCceEEEeeCCHHHHHHHHHhhhhccccchhccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCC---------
Confidence 45799999999999999999999999999999998643 3799999999999999999999998851
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
++|+|||||||||+||+|||++.| +++||||||||||++|+||+||||++||+|||+||+|||||++|+|||++||
T Consensus 201 ~~d~VWVhDYhL~llP~~LR~~~~----~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~ 276 (854)
T PLN02205 201 EDDFVWIHDYHLMVLPTFLRKRFN----RVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCC 276 (854)
T ss_pred CCCEEEEeCchhhHHHHHHHhhCC----CCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHH
Confidence 269999999999999999999765 8999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCceecCC--CcEEEECCeEEEEEEeecccCchhhhhhhccch------hhhc----cCCeEEEEecCccccCCHHH
Q psy775 291 QRRLGCRVDRK--NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP------RVID----TKQKIVLGVDRLDYTKGLVH 358 (1460)
Q Consensus 291 ~riLg~~~~~~--~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~------~~~~----~~~kvIL~VgRLd~~KGI~~ 358 (1460)
+|++|+++... ...++|+||.++|.++|+|||++.|....+.+. ++++ .|+++|++|||+|++|||.+
T Consensus 277 ~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~ 356 (854)
T PLN02205 277 SRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISL 356 (854)
T ss_pred HHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHH
Confidence 99999987653 356889999999999999999999977654321 2222 26899999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q psy775 359 RLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA 438 (1460)
Q Consensus 359 lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aA 438 (1460)
+|+||++||++||+|++|++|+|++.|+|+++++|+++++++++++++||++||+.+|.||+|+++.++.+|+.|||++|
T Consensus 357 kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~A 436 (854)
T PLN02205 357 KLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVA 436 (854)
T ss_pred HHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEccCCCCCCcceeeeeeeccCC--------------CCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcC
Q psy775 439 AVALVTPLRDGMNLVAKEFVACQINE--------------PPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 439 DV~VvpSlrEGfnLValEamAcq~~~--------------~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~ 504 (1460)
||+++||+|||||||++||+|||++. ++|+||+|||+||+++|.+|++|||||++++|+||++||+
T Consensus 437 Dv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~ 516 (854)
T PLN02205 437 ECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALE 516 (854)
T ss_pred cEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHc
Confidence 99999999999999999999999752 4799999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHhhccCCCC------CCCCc-eeeccccc
Q psy775 505 MPEDERTLRMNYLRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQILAQEEPAD------SGTPL-VWIHDYHL 577 (1460)
Q Consensus 505 m~~~er~~R~~~l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~------~~~di-IwIhDYhL 577 (1460)
||.+||+.|+++++++|.+++ +.+ |++.++..++....+..+. .+..+ +.-+|-++
T Consensus 517 m~~~Er~~R~~~~~~~v~~~d----------------~~~-W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~ 579 (854)
T PLN02205 517 MAEPEKQLRHEKHYRYVSTHD----------------VGY-WARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNF 579 (854)
T ss_pred CCHHHHHHHHHHHHHHHhhCC----------------HHH-HHHHHHHHHHHHHHHHhhhhhcccccccccccccccccc
Confidence 999999999999999999999 777 9999999987753321000 00000 11133222
Q ss_pred c--ccHHHHHHHHhhcCcCceEEEEeeCC---CCCcc-ccccCccHHHHHhhcccC
Q psy775 578 M--LAANTIRNIADEQNLKFKLGFFLHIP---FPPWD-IFRLFPWSDEILQGMLGC 627 (1460)
Q Consensus 578 ~--LlP~~Lr~~~~~~~~~~kigfFLHiP---fP~~e-~fr~lP~r~eIL~~LL~a 627 (1460)
- -....+. ++....++.+|||+- .|... ...+.|...++|+.|+..
T Consensus 580 ~~l~~~~i~~----~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d 631 (854)
T PLN02205 580 RKLSMEHIVS----AYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRD 631 (854)
T ss_pred cccCHHHHHH----HHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhc
Confidence 1 1122232 566778899999994 22221 345667888999998653
No 4
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=7.6e-94 Score=908.92 Aligned_cols=450 Identities=37% Similarity=0.609 Sum_probs=397.9
Q ss_pred HHhhccCceeeecCcccccccccccccccccccccCCC-------CccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy775 134 LKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMP-------DRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEE 206 (1460)
Q Consensus 134 ~~L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~-------d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~ 206 (1460)
..+.+++|.||++++++++.||+||||++|||+|||++ +...|++.+|++|++||++||++|++.++
T Consensus 157 ~~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~------ 230 (934)
T PLN03064 157 KALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYE------ 230 (934)
T ss_pred HHhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcC------
Confidence 44568999999999999999999999999999999973 34568889999999999999999999885
Q ss_pred CCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHH
Q psy775 207 PADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNF 286 (1460)
Q Consensus 207 ~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~F 286 (1460)
+||+||||||||||||+|||++.| +++||||||||||++|+||+||+|++||+|||+||+|||||++|++||
T Consensus 231 ----~gD~VWVHDYHL~LlP~~LR~~~p----~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhF 302 (934)
T PLN03064 231 ----EGDVVWCHDYHLMFLPKCLKEYNS----NMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHF 302 (934)
T ss_pred ----CCCEEEEecchhhHHHHHHHHhCC----CCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHH
Confidence 699999999999999999999765 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch------hhhc--cCCeEEEEecCccccCCHHH
Q psy775 287 VDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP------RVID--TKQKIVLGVDRLDYTKGLVH 358 (1460)
Q Consensus 287 L~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~------~~~~--~~~kvIL~VgRLd~~KGI~~ 358 (1460)
++||.|++|.+.... .+.++||.++|.++|+|||++.|........ .++. .++++|++|||||++|||++
T Consensus 303 l~~c~rlLg~~~~~~--~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~ 380 (934)
T PLN03064 303 VSACTRILGLEGTPE--GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQ 380 (934)
T ss_pred HHHHHHHhCccccCC--eEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHH
Confidence 999999999886654 3789999999999999999999987654321 2222 68999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q psy775 359 RLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA 438 (1460)
Q Consensus 359 lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aA 438 (1460)
+|+||++||++||+|+++|+|+||++|+|+++++|++|++++.++|++||++||+.+|.||+|++..+++++|.+||++|
T Consensus 381 kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~A 460 (934)
T PLN03064 381 KILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVT 460 (934)
T ss_pred HHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Q psy775 439 AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH-EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 517 (1460)
Q Consensus 439 DV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~-~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l 517 (1460)
||||+||++||||||++||||||... +|+||+|||+|++++|+ +|++|||||++++|+||++||+|+++||+.|++.+
T Consensus 461 DV~lvTslrDGmNLva~Eyva~~~~~-~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~ 539 (934)
T PLN03064 461 DVALVTSLRDGMNLVSYEFVACQDSK-KGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHN 539 (934)
T ss_pred CEEEeCccccccCchHHHHHHhhcCC-CCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999999999865 89999999999999994 79999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceE
Q psy775 518 RKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597 (1460)
Q Consensus 518 ~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~ki 597 (1460)
++++..++ +.+ |++.|+..++....++.. ....+. ..+-....+. ++..+.++
T Consensus 540 ~~~V~~~d----------------~~~-Wa~~fl~~L~~~~~~~~~-~~~~~~-----~~l~~~~~~~----~y~~a~~R 592 (934)
T PLN03064 540 FMHVTTHT----------------AQE-WAETFVSELNDTVVEAQL-RTRQVP-----PQLPPEDAIQ----RYLQSNNR 592 (934)
T ss_pred HhhcccCC----------------HHH-HHHHHHHHHHHHHhhhhc-cccccC-----CCCCHHHHHH----HHHhccce
Confidence 99999999 666 999999988775432210 000100 0111222232 55667789
Q ss_pred EEEeeC-----CC-CCcc---------ccccCccHHHHHhhcccC
Q psy775 598 GFFLHI-----PF-PPWD---------IFRLFPWSDEILQGMLGC 627 (1460)
Q Consensus 598 gfFLHi-----Pf-P~~e---------~fr~lP~r~eIL~~LL~a 627 (1460)
.||||| |+ +.|+ ..++.|...++|+.|...
T Consensus 593 LlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d 637 (934)
T PLN03064 593 LLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD 637 (934)
T ss_pred EEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC
Confidence 999999 53 4454 556778889999998764
No 5
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=1.2e-94 Score=873.85 Aligned_cols=414 Identities=48% Similarity=0.859 Sum_probs=324.4
Q ss_pred cceeEccCCcccccCCCCccccCCCccchhhhhhHHHhhccCceeeecCcccccccccccccccccccccCCCC----cc
Q psy775 99 GLTYAGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPD----RA 174 (1460)
Q Consensus 99 ~~~~ig~hGaei~~~g~~i~~~pI~ee~vdeL~ii~~L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d----~~ 174 (1460)
+..|+|+.|........ ..+.+. .....+++|+||++++++++.||+||||++|||+|||.++ ..
T Consensus 46 ~~~WvGw~g~~~~~~~~-------~~~~v~----~~~~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~~ 114 (474)
T PF00982_consen 46 GGIWVGWPGVDVDEEED-------EQDRVE----PRLLDEYNCVPVFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDLA 114 (474)
T ss_dssp -EEEEEEEEEES-TTS----------EEEE-------ETTEEEEEEEE-HHHHHHHTTTHHHHTHHHHHTT-GG----G-
T ss_pred CCEEEEeCCCcCccccc-------cccchh----hhcccCceEEEEEcCHHHHHHHHHhhhhhccCcccccccccccccc
Confidence 34577877776554431 011001 2234678899999999999999999999999999998655 78
Q ss_pred ccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCcc
Q psy775 175 MFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWD 254 (1460)
Q Consensus 175 ~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~e 254 (1460)
.|+.++|++|++||++||++|++.++ +||+||||||||||||++||++.| +++||||||||||++|
T Consensus 115 ~~~~~~w~~Y~~vN~~FA~~i~~~~~----------~~D~VWVhDYhL~llP~~LR~~~~----~~~IgfFlHiPFPs~e 180 (474)
T PF00982_consen 115 RFEEEWWEAYKRVNRRFADAIAEVYR----------PGDLVWVHDYHLMLLPQMLRERGP----DARIGFFLHIPFPSSE 180 (474)
T ss_dssp ---HHHHHHHHHHHHHHHHHHGGG------------TT-EEEEESGGGTTHHHHHHHTT------SEEEEEE-S----HH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhCc----------CCCEEEEeCCcHHHHHHHHHhhcC----CceEeeEEecCCCCHH
Confidence 89999999999999999999999886 699999999999999999999766 8999999999999999
Q ss_pred ccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch
Q psy775 255 IFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP 334 (1460)
Q Consensus 255 ifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~ 334 (1460)
+|++||+|++||+|||+||+|||||++|++||++||++++|+++......++++||.++|.++|+|||++.|.+.+.+..
T Consensus 181 ~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~ 260 (474)
T PF00982_consen 181 IFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPE 260 (474)
T ss_dssp HHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S-
T ss_pred HHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChH
Confidence 99999999999999999999999999999999999999999988766546899999999999999999999987654321
Q ss_pred ------hhhc--cC-CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHH
Q psy775 335 ------RVID--TK-QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 405 (1460)
Q Consensus 335 ------~~~~--~~-~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~ 405 (1460)
.+++ ++ +++|++|||+|++|||+++|+||++||++||+++++|+|+|++.|+++++++|++++++++++|+
T Consensus 261 v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~ 340 (474)
T PF00982_consen 261 VQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVG 340 (474)
T ss_dssp --HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHH
Confidence 2222 56 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-cc
Q psy775 406 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH-EA 484 (1460)
Q Consensus 406 ~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~-~a 484 (1460)
+||++||+.+|.||+|+++.++.+++.+||++|||+++||++|||||||+||+|||.+. +|+||+|||+|++++|. +|
T Consensus 341 ~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~-~GvLiLSefaGaa~~L~~~a 419 (474)
T PF00982_consen 341 RINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDN-PGVLILSEFAGAAEQLSEAA 419 (474)
T ss_dssp HHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS---EEEEETTBGGGGT-TTS-
T ss_pred HHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCC-CCceEeeccCCHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999885 89999999999999998 46
Q ss_pred EEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHH
Q psy775 485 LICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQ 555 (1460)
Q Consensus 485 llVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~ 555 (1460)
++|||||++++|+||++||+||++||+.|++.++++|..++ +++ |++.+++.++
T Consensus 420 l~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~----------------~~~-W~~~~l~~L~ 473 (474)
T PF00982_consen 420 LLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHD----------------VQW-WAESFLRDLK 473 (474)
T ss_dssp EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-----------------HHH-HHHHHHHHHH
T ss_pred EEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCC----------------HHH-HHHHHHHHhh
Confidence 99999999999999999999999999999999999999999 766 9999998875
No 6
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-92 Score=838.71 Aligned_cols=384 Identities=45% Similarity=0.814 Sum_probs=360.0
Q ss_pred ccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEE
Q psy775 138 QEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWI 217 (1460)
Q Consensus 138 q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwI 217 (1460)
.+...+|.++.+++..||++|||++|||+|||+++...|++.+|++|++||++||++|++.|+ +||+|||
T Consensus 84 ~~~~~~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~~~~~~~w~~Y~~vN~~FAd~i~~~~~----------~gDiIWV 153 (486)
T COG0380 84 EFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVAYERNWWDAYVKVNRKFADKIVEIYE----------PGDIIWV 153 (486)
T ss_pred cceEEEEecCHHHHHHHHHHhhHhhhcceeeeecCccccchHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEE
Confidence 677899999999999999999999999999999999999999999999999999999999986 6999999
Q ss_pred eCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCce
Q psy775 218 HDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCR 297 (1460)
Q Consensus 218 HDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~ 297 (1460)
|||||+|||+|||++.| +++||||||||||++|+|+|||+|++|++|||+||+||||+++|++||+++|+++++.+
T Consensus 154 hDYhL~L~P~mlR~~~~----~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~ 229 (486)
T COG0380 154 HDYHLLLVPQMLRERIP----DAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVT 229 (486)
T ss_pred EechhhhhHHHHHHhCC----CceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccc
Confidence 99999999999999766 89999999999999999999999999999999999999999999999999999999865
Q ss_pred ecCCCcEEE---ECCeEEEEEEeecccCchhhhhhhccc------hhhhc---cCCeEEEEecCccccCCHHHHHHHHHH
Q psy775 298 VDRKNLLVE---HGGRTVRIRPLPIAIPYERFVQLAQAA------PRVID---TKQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 298 ~~~~~~~i~---~~Gr~vkV~viPiGID~~~f~~~~~~~------~~~~~---~~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
... .+. ++|+.+++.++|+|||++.|....... .++++ .++++|++|||+||+||++++++||++
T Consensus 230 ~~~---~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~ 306 (486)
T COG0380 230 GDA---DIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFER 306 (486)
T ss_pred ccc---cccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHH
Confidence 221 123 447999999999999999998765332 22222 449999999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
||++||+|++||+|+|++.||+++.++|++++.+++++|++||++||+.+|+||+|++..++.+++.+||++||++++||
T Consensus 307 lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtp 386 (486)
T COG0380 307 LLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTP 386 (486)
T ss_pred HHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 446 LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
++||||||++||+|||.. ++|+||+|||+|++.+|.+|++|||||.+++|+||++||+|+++||+.|++++.+.+.++|
T Consensus 387 lrDGMNLvakEyVa~q~~-~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d 465 (486)
T COG0380 387 LRDGMNLVAKEYVAAQRD-KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHD 465 (486)
T ss_pred ccccccHHHHHHHHhhcC-CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999994 4999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcchhhhhhhHHHHHHHHHHHHH
Q psy775 526 CPGQSSLGGNTSAYAQVNQEFADKTIKALQI 556 (1460)
Q Consensus 526 ~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~ 556 (1460)
+++ |+++++..+..
T Consensus 466 ----------------~~~-W~~~fl~~la~ 479 (486)
T COG0380 466 ----------------VAR-WANSFLDDLAQ 479 (486)
T ss_pred ----------------HHH-HHHHHHHHHHh
Confidence 777 99999988754
No 7
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=5.9e-91 Score=887.78 Aligned_cols=488 Identities=30% Similarity=0.510 Sum_probs=413.8
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc
Q psy775 534 GNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL 613 (1460)
Q Consensus 534 ~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~ 613 (1460)
..|++|+++|++||+++++.++ ++ .|+||||||||+++|.+|| +.+++.+||||||+|||++|+|++
T Consensus 178 ~~w~~Y~~vN~~FA~~v~~~~~---~~------~d~VWVhDYhL~llP~~LR----~~~~~~~IgfFlHiPFPs~eifr~ 244 (854)
T PLN02205 178 SLWQAYVSVNKIFADRIMEVIN---PE------DDFVWIHDYHLMVLPTFLR----KRFNRVKLGFFLHSPFPSSEIYKT 244 (854)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC---CC------CCEEEEeCchhhHHHHHHH----hhCCCCcEEEEecCCCCChHHHhh
Confidence 3699999999999999998753 22 2799999999999999999 667899999999999999999999
Q ss_pred CccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCC--CcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccc
Q psy775 614 FPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRK--NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRV 691 (1460)
Q Consensus 614 lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~--~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~ 691 (1460)
+|+|++||+|||+||+|||||++|+|||++||+|+||+++..+ ...++|+||+|+|+++|+|||++.|...+.. +++
T Consensus 245 LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~-~~~ 323 (854)
T PLN02205 245 LPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL-PET 323 (854)
T ss_pred CCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC-hhH
Confidence 9999999999999999999999999999999999999988653 3578999999999999999999999887663 222
Q ss_pred cccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCC
Q psy775 692 IDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHP 771 (1460)
Q Consensus 692 ~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P 771 (1460)
. ++++++|++++ ..++++|+||||+|++|||.+||+||++||++||
T Consensus 324 ~-----------------~~~~~l~~~~~-----------------~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P 369 (854)
T PLN02205 324 E-----------------AKVKELIKQFC-----------------DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHP 369 (854)
T ss_pred H-----------------HHHHHHHHHhc-----------------cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCc
Confidence 2 12344554321 1378999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCC
Q psy775 772 EHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMN 851 (1460)
Q Consensus 772 ~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmn 851 (1460)
+|+|||+||||+.|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++|+.|||++|||+++||+|||||
T Consensus 370 ~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMN 449 (854)
T PLN02205 370 EWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMN 449 (854)
T ss_pred cccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEecccc
Q psy775 852 LVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFA 931 (1460)
Q Consensus 852 Lva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~ 931 (1460)
|||+||+|||++.+. +....|.. ..+.++||||+|||+
T Consensus 450 Lva~Eyia~~~~~~~----~~~~~~~~--------------------------------------~~~~~~gvLiLSEfa 487 (854)
T PLN02205 450 LIPYEYIISRQGNEK----LDKLLGLE--------------------------------------PSTPKKSMLVVSEFI 487 (854)
T ss_pred ccchheeEEccCccc----cccccccc--------------------------------------cccCCCCceEeeecc
Confidence 999999999975410 00001100 123578999999999
Q ss_pred CCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhccC----------
Q psy775 932 GAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDG---------- 1001 (1460)
Q Consensus 932 G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~---------- 1001 (1460)
|||.+|++|++|||||++++|+||++||+||.+||+.|+++++++|++||+.+|+++||.+|.+...+..
T Consensus 488 Gaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g 567 (854)
T PLN02205 488 GCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFG 567 (854)
T ss_pred chhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999988754321
Q ss_pred ------------CCCCcccchHHhHhhhhcceeeeec-------c---CCCccccccccChHHHHHHhhhc---------
Q psy775 1002 ------------DDVLPTTLIADEQNLKFKLGFFLHI-------P---FPPWDIFRLFPWSDEILQGMLGK--------- 1050 (1460)
Q Consensus 1002 ------------~~~~~~~~~~~~~~~k~~~~f~~~i-------~---e~~~~~~~~~~~~~~il~~l~~~--------- 1050 (1460)
..+....+...|+.+++|+ |++++ . ..|++ +++ ++|++||++
T Consensus 568 ~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rl-I~LDyDGTLlp~~~~~~~p~~--~~~----~~L~~L~~d~g~~VaIvS 640 (854)
T PLN02205 568 LSFRVVALDPNFRKLSMEHIVSAYKRTTTRA-ILLDYDGTLMPQASIDKSPSS--KSI----DILNTLCRDKNNMVFIVS 640 (854)
T ss_pred cccccccccccccccCHHHHHHHHHhhcCeE-EEEecCCcccCCccccCCCCH--HHH----HHHHHHHhcCCCEEEEEe
Confidence 0112355678899999995 77764 1 13334 466 899999754
Q ss_pred -ccchhhhhhhccccccccccCceeccceeeecCC--CCccccc--cCCChHHHhh----------c---ccccceeeee
Q psy775 1051 -ASLGLLSWLCNTIKNIADEQNLKFKLGFFLHIPF--PPWDIFR--LFPWSDEILQ----------G---MLGCDMVGFH 1112 (1460)
Q Consensus 1051 -~~~~~~~~l~~~~~n~~~~~~l~ae~g~~~r~~~--~~~~~~~--~~~~~~~~~~----------~---~~~~~~~~~~ 1112 (1460)
+++..++.++..+.|+ +++||||+|+|.+| .|-.... +..|++.+.. | ......+.+|
T Consensus 641 GR~~~~L~~~f~~~~~l----~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~H 716 (854)
T PLN02205 641 ARSRKTLADWFSPCEKL----GIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWC 716 (854)
T ss_pred CCCHHHHHHHhCCCCCe----EEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEe
Confidence 6789999999998888 99999999999887 4644444 5679964431 3 2346778999
Q ss_pred cccccccccc
Q psy775 1113 IEDYCLNFVD 1122 (1460)
Q Consensus 1113 ~~~~~~~~~~ 1122 (1460)
..++++.|..
T Consensus 717 yR~adpd~~~ 726 (854)
T PLN02205 717 YEDADPDFGS 726 (854)
T ss_pred hhhCChHHhh
Confidence 9998776643
No 8
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.5e-88 Score=860.58 Aligned_cols=475 Identities=35% Similarity=0.558 Sum_probs=405.7
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc
Q psy775 533 GGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 612 (1460)
Q Consensus 533 ~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr 612 (1460)
...|++|++||++||+++.+.++ ++|+||||||||+++|.+|| +..++.+||||||+|||++|+|+
T Consensus 208 ~~~w~~Y~~vN~~FA~~i~~~~~----------~gD~VWVHDYHL~LlP~~LR----~~~p~~~IGfFlHiPFPs~Eifr 273 (934)
T PLN03064 208 QSQFAAYKKANQMFADVVNEHYE----------EGDVVWCHDYHLMFLPKCLK----EYNSNMKVGWFLHTPFPSSEIHR 273 (934)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEecchhhHHHHHHH----HhCCCCcEEEEecCCCCChHHHh
Confidence 35799999999999999998753 23799999999999999999 66789999999999999999999
Q ss_pred cCccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcccc
Q psy775 613 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692 (1460)
Q Consensus 613 ~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~ 692 (1460)
++|+|++||+|||+||+|||||++|++||++||+|++|++.... .+.++||.++|.++|+|||++.|...+.. +++.
T Consensus 274 ~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~--~v~~~Gr~v~V~~~PiGID~~~f~~~~~~-~~v~ 350 (934)
T PLN03064 274 TLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE--GVEDQGRLTRVAAFPIGIDSDRFIRALET-PQVQ 350 (934)
T ss_pred hCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC--eEEECCEEEEEEEEeCEEcHHHHHHHhcC-hhHH
Confidence 99999999999999999999999999999999999999886654 48999999999999999999999987663 3332
Q ss_pred ccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCC
Q psy775 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE 772 (1460)
Q Consensus 693 ~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~ 772 (1460)
++++++|+. +.++++|+||||||++|||++||+||++||++||+
T Consensus 351 -----------------~~~~~lr~~-------------------~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe 394 (934)
T PLN03064 351 -----------------QHIKELKER-------------------FAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPE 394 (934)
T ss_pred -----------------HHHHHHHHH-------------------hCCceEEEEeeccccccCHHHHHHHHHHHHHhCcc
Confidence 233455543 26789999999999999999999999999999999
Q ss_pred CCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCc
Q psy775 773 HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNL 852 (1460)
Q Consensus 773 ~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnL 852 (1460)
|++||+||||++|+|+++++|+++++++.++|++||++||+.+|.||+|+++.++++||+|||++|||||+||+||||||
T Consensus 395 ~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNL 474 (934)
T PLN03064 395 WRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNL 474 (934)
T ss_pred ccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccC
Q psy775 853 VAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAG 932 (1460)
Q Consensus 853 va~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G 932 (1460)
|++||||||..+ +|+||+|||+|+++
T Consensus 475 va~Eyva~~~~~-~GvLILSEfaGaa~----------------------------------------------------- 500 (934)
T PLN03064 475 VSYEFVACQDSK-KGVLILSEFAGAAQ----------------------------------------------------- 500 (934)
T ss_pred hHHHHHHhhcCC-CCCeEEeCCCchHH-----------------------------------------------------
Confidence 999999999865 79999999999887
Q ss_pred Ccccc-cceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhccC---CC----C
Q psy775 933 AGEQM-HEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDG---DD----V 1004 (1460)
Q Consensus 933 ~~~~l-~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~---~~----~ 1004 (1460)
+| .+|++|||||++++|++|++||+|+++||+.|+++++++|.+||+.+|++.|+.+|.....+.. .. +
T Consensus 501 ---~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~~~~~~~~~~l 577 (934)
T PLN03064 501 ---SLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPQL 577 (934)
T ss_pred ---HhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhhccccccCCCC
Confidence 33 4789999999999999999999999999999999999999999999999999999998864322 11 2
Q ss_pred CcccchHHhHhhhhcceeeeec-------cCCCcc----cc--ccccCh--HHHHHHhhhc----------ccchhhhhh
Q psy775 1005 LPTTLIADEQNLKFKLGFFLHI-------PFPPWD----IF--RLFPWS--DEILQGMLGK----------ASLGLLSWL 1059 (1460)
Q Consensus 1005 ~~~~~~~~~~~~k~~~~f~~~i-------~e~~~~----~~--~~~~~~--~~il~~l~~~----------~~~~~~~~l 1059 (1460)
....++..|.++++++ ||+++ ..-|.. +. ...|+. -++|+.||+. +++..|+.+
T Consensus 578 ~~~~~~~~y~~a~~RL-lfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~ 656 (934)
T PLN03064 578 PPEDAIQRYLQSNNRL-LILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDEN 656 (934)
T ss_pred CHHHHHHHHHhccceE-EEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHH
Confidence 2366778899999995 77765 111110 00 011222 1678899875 567888888
Q ss_pred hccccccccccCceeccceeeecCC-CCc-cccc--cCCChHHHhh----------c---ccccceeeeecccccccccc
Q psy775 1060 CNTIKNIADEQNLKFKLGFFLHIPF-PPW-DIFR--LFPWSDEILQ----------G---MLGCDMVGFHIEDYCLNFVD 1122 (1460)
Q Consensus 1060 ~~~~~n~~~~~~l~ae~g~~~r~~~-~~~-~~~~--~~~~~~~~~~----------~---~~~~~~~~~~~~~~~~~~~~ 1122 (1460)
+..+ |+ ||+||||+|+|.++ .|. +... +.+|++.+.. | .....-+.||..++...|..
T Consensus 657 fg~~-~L----~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~ 731 (934)
T PLN03064 657 FGEF-DM----WLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGR 731 (934)
T ss_pred hCCC-Cc----eEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHH
Confidence 8887 88 99999999999866 665 3444 4589976643 4 34567788999999655544
Q ss_pred c
Q psy775 1123 C 1123 (1460)
Q Consensus 1123 ~ 1123 (1460)
+
T Consensus 732 ~ 732 (934)
T PLN03064 732 L 732 (934)
T ss_pred H
Confidence 4
No 9
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.8e-87 Score=856.11 Aligned_cols=449 Identities=35% Similarity=0.602 Sum_probs=395.3
Q ss_pred HHhhccCceeeecCcccccccccccccccccccccCCC-------CccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccC
Q psy775 134 LKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMP-------DRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEE 206 (1460)
Q Consensus 134 ~~L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~-------d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~ 206 (1460)
..+.+++|.||++ +++++.||+||||++|||+|||+. +...|.+++|++|++||++||++|++.++
T Consensus 74 ~~~~~~~~~pv~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~------ 146 (797)
T PLN03063 74 ESLAEKGCIPVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYE------ 146 (797)
T ss_pred HHhhcCCeEEeeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcC------
Confidence 3356899999999 899999999999999999999982 23456678999999999999999999885
Q ss_pred CCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHH
Q psy775 207 PADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNF 286 (1460)
Q Consensus 207 ~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~F 286 (1460)
+||+||||||||||||+|||++.| +++||||||||||++|+||+||+|++|++|||+||+|||||++|++||
T Consensus 147 ----~~d~vWvhDYhL~llp~~lR~~~~----~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~F 218 (797)
T PLN03063 147 ----EGDVVWCHDYHLMFLPQYLKEYNN----KMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHF 218 (797)
T ss_pred ----CCCEEEEecchhhhHHHHHHHhCC----CCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHH
Confidence 699999999999999999999765 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccc------hhhhc--cCCeEEEEecCccccCCHHH
Q psy775 287 VDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA------PRVID--TKQKIVLGVDRLDYTKGLVH 358 (1460)
Q Consensus 287 L~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~------~~~~~--~~~kvIL~VgRLd~~KGI~~ 358 (1460)
+++|++++|.+..... +.++|+.++|.++|+|||++.|.+..... ..+++ +++++|++|||+++.||+..
T Consensus 219 l~~~~r~l~~~~~~~~--i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~ 296 (797)
T PLN03063 219 LSACTRILGVEGTHEG--VVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQ 296 (797)
T ss_pred HHHHHHHhCccccCCc--eEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHH
Confidence 9999999998765543 77999999999999999999997654321 12222 67899999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q psy775 359 RLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA 438 (1460)
Q Consensus 359 lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aA 438 (1460)
+|+||++|++++|+++++++|+|++.|+++++++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|
T Consensus 297 lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~A 376 (797)
T PLN03063 297 KYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAIT 376 (797)
T ss_pred HHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Q psy775 439 AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH-EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 517 (1460)
Q Consensus 439 DV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~-~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l 517 (1460)
||||+||++||||||++||||||++. +|++|+||++|++++++ +|++|||||++++|+||.++|+|+++||+.|++.+
T Consensus 377 DvfvvtSlrEGmnLv~lEamA~g~p~-~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~ 455 (797)
T PLN03063 377 DVMLVTSLRDGMNLVSYEFVACQKAK-KGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHN 455 (797)
T ss_pred CEEEeCccccccCcchhhHheeecCC-CCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999999999986 89999999999999995 79999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceE
Q psy775 518 RKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597 (1460)
Q Consensus 518 ~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~ki 597 (1460)
++++.+++ +.+ |++.+++.++.+...+..... +.....-....+. ++..+.++
T Consensus 456 ~~~v~~~~----------------~~~-Wa~~fl~~l~~~~~~~~~~~~------~~~~~l~~~~~~~----~y~~a~~r 508 (797)
T PLN03063 456 FQYVKTHS----------------AQK-WADDFMSELNDIIVEAELRTR------NIPLELPEQDVIQ----QYSKSNNR 508 (797)
T ss_pred HHhhhhCC----------------HHH-HHHHHHHHHHHHhhhhhhccc------CCCCCCCHHHHHH----HHHhccCe
Confidence 99999999 666 999999998876543211000 1111222233333 55667789
Q ss_pred EEEeeC-----CC-C---CccccccCccHHHHHhhcccC
Q psy775 598 GFFLHI-----PF-P---PWDIFRLFPWSDEILQGMLGC 627 (1460)
Q Consensus 598 gfFLHi-----Pf-P---~~e~fr~lP~r~eIL~~LL~a 627 (1460)
.||||| |+ | .|+...+.|...++|+.|...
T Consensus 509 ll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d 547 (797)
T PLN03063 509 LLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSD 547 (797)
T ss_pred EEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcC
Confidence 999999 43 2 346677888999999998764
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=1.1e-86 Score=805.86 Aligned_cols=385 Identities=47% Similarity=0.829 Sum_probs=362.4
Q ss_pred hhccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEE
Q psy775 136 TLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLV 215 (1460)
Q Consensus 136 L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvV 215 (1460)
..+++|.||++++++++.||+||||++|||+|||+++...|++++|++|++||++||++|++.++ +||+|
T Consensus 62 ~~~~~~~~v~l~~~~~~~~y~gf~n~~lWPl~H~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~~----------~~d~v 131 (456)
T TIGR02400 62 EGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLIRYDRKAWEAYRRVNRLFAEALAPLLQ----------PGDIV 131 (456)
T ss_pred ccCceEEEEECCHHHHHHHHHHhhhhhcchhhcccccccccCHHHHHHHHHHHHHHHHHHHHhCC----------CCCEE
Confidence 34678999999999999999999999999999999999999999999999999999999999875 69999
Q ss_pred EEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcC
Q psy775 216 WIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLG 295 (1460)
Q Consensus 216 wIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg 295 (1460)
||||||||+||+|||++.| +++||||||||||++|+|++||+|++|++|||+||+|||||++|++||+++|++++|
T Consensus 132 wvhDYhl~l~p~~lr~~~~----~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~ 207 (456)
T TIGR02400 132 WVHDYHLMLLPAMLRELGV----QNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELG 207 (456)
T ss_pred EEecchhhHHHHHHHhhCC----CCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhC
Confidence 9999999999999998765 899999999999999999999999999999999999999999999999999999999
Q ss_pred ceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch------hhhc--cCCeEEEEecCccccCCHHHHHHHHHHHH
Q psy775 296 CRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP------RVID--TKQKIVLGVDRLDYTKGLVHRLKAFETLL 367 (1460)
Q Consensus 296 ~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~------~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af~~lL 367 (1460)
.+..... +.++|+.++|.++|+|||++.|.+...... .+++ .++++|++|||+++.||++.+|+||++|+
T Consensus 208 ~~~~~~~--~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll 285 (456)
T TIGR02400 208 LETLPNG--VESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFL 285 (456)
T ss_pred CcccCCc--eEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHH
Confidence 8877654 678899999999999999999986543321 1222 67899999999999999999999999999
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCC
Q psy775 368 EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR 447 (1460)
Q Consensus 368 ~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlr 447 (1460)
+++|+++++++|+|++.|+++++++|+++++++++++++||++||+.+|.|++++.+.++.+++.++|++|||||+||++
T Consensus 286 ~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~ 365 (456)
T TIGR02400 286 EEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLR 365 (456)
T ss_pred HhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCCC
Q psy775 448 DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNCP 527 (1460)
Q Consensus 448 EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~~ 527 (1460)
||||||++|||||+.|. +|+||+|+++|+++++.+|++|||+|++++|+||.++|+|+.+||+.|++.+++++.+++
T Consensus 366 EG~~Lv~lEamA~g~P~-~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~-- 442 (456)
T TIGR02400 366 DGMNLVAKEYVAAQDPK-DGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKND-- 442 (456)
T ss_pred cccCccHHHHHHhcCCC-CceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCC--
Confidence 99999999999999997 699999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcchhhhhhhHHHHHHHHHHH
Q psy775 528 GQSSLGGNTSAYAQVNQEFADKTIKAL 554 (1460)
Q Consensus 528 ~~~sl~~~~~~Y~~VNq~fAd~~le~l 554 (1460)
+++ |+++++..+
T Consensus 443 --------------~~~-W~~~~l~~l 454 (456)
T TIGR02400 443 --------------VQR-WREDFLSDL 454 (456)
T ss_pred --------------HHH-HHHHHHHHh
Confidence 666 999998765
No 11
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=1.5e-86 Score=794.51 Aligned_cols=357 Identities=37% Similarity=0.652 Sum_probs=328.8
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc
Q psy775 533 GGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 612 (1460)
Q Consensus 533 ~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr 612 (1460)
...|++|++||++||+++.+.++ ++|+||||||||+++|++|| +.+++.+||||||+|||++|+|+
T Consensus 100 ~~~w~~Y~~VN~~FA~~v~~~~~----------~~D~VWVHDYhL~llp~~LR----~~~~~~~IgFFlHiPFPs~eifr 165 (474)
T PRK10117 100 RPAWEGYLRVNALLADKLLPLLK----------DDDIIWIHDYHLLPFASELR----KRGVNNRIGFFLHIPFPTPEIFN 165 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEeccHhhHHHHHHH----HhCCCCcEEEEEeCCCCChHHHh
Confidence 35799999999999999998653 23799999999999999999 67899999999999999999999
Q ss_pred cCccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcccc
Q psy775 613 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692 (1460)
Q Consensus 613 ~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~ 692 (1460)
++|++++||+|||+||+|||||++|++||++||++++|++...+ ..+.++||.++|.++|+|||++.|.+.+.+ + +.
T Consensus 166 ~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~-~~v~~~gr~v~v~~~PigID~~~~~~~a~~-~-~~ 242 (474)
T PRK10117 166 ALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG-KSHTAWGKAFRTEVYPIGIEPDEIAKQAAG-P-LP 242 (474)
T ss_pred hCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC-CeEEECCeEEEEEEEECeEcHHHHHHHhhc-h-HH
Confidence 99999999999999999999999999999999999999887554 367889999999999999999999887653 2 11
Q ss_pred ccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCC
Q psy775 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE 772 (1460)
Q Consensus 693 ~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~ 772 (1460)
.+.+++|+. .+++++|+|||||||+|||++||+||++||++||+
T Consensus 243 -----------------~~~~~lr~~-------------------~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe 286 (474)
T PRK10117 243 -----------------PKLAQLKAE-------------------LKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQ 286 (474)
T ss_pred -----------------HHHHHHHHH-------------------cCCCeEEEEecccccccCHHHHHHHHHHHHHhChh
Confidence 123444443 25799999999999999999999999999999999
Q ss_pred CCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCc
Q psy775 773 HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNL 852 (1460)
Q Consensus 773 ~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnL 852 (1460)
|+|||+|+||+.|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++++.|||++|||++|||+||||||
T Consensus 287 ~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNL 366 (474)
T PRK10117 287 HHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNL 366 (474)
T ss_pred hcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEeccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccC
Q psy775 853 VAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAG 932 (1460)
Q Consensus 853 va~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G 932 (1460)
||+||+|||++.++|+||+|||+|+++
T Consensus 367 VAkEyva~q~~~~~GvLILSefAGaA~----------------------------------------------------- 393 (474)
T PRK10117 367 VAKEYVAAQDPANPGVLVLSQFAGAAN----------------------------------------------------- 393 (474)
T ss_pred ccchheeeecCCCCccEEEecccchHH-----------------------------------------------------
Confidence 999999999866689999999999888
Q ss_pred CcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhh
Q psy775 933 AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLIT 998 (1460)
Q Consensus 933 ~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 998 (1460)
+|++|++|||||++++|+||++||+||.+||+.|++.|+++|.+||+.+|+++||++|.....
T Consensus 394 ---~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~ 456 (474)
T PRK10117 394 ---ELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVP 456 (474)
T ss_pred ---HhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Confidence 556899999999999999999999999999999999999999999999999999999987753
No 12
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=3.4e-83 Score=816.45 Aligned_cols=459 Identities=41% Similarity=0.721 Sum_probs=401.1
Q ss_pred HhhccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCE
Q psy775 135 KTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPL 214 (1460)
Q Consensus 135 ~L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDv 214 (1460)
.+.+++|.||++++++++.||+||||++|||+|||+++...|++++|++|++||++||++|++.++ +||+
T Consensus 67 ~~~~~~~~~v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~~~~~~~~w~~Y~~vN~~fA~~~~~~~~----------~~d~ 136 (726)
T PRK14501 67 RLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRFWESYERVNQRFAEAIAAIAR----------PGDV 136 (726)
T ss_pred hccCceEEEEeCCHHHHHHHHHHhhhccccchhcccCcccCcCHHHHHHHHHHHHHHHHHHHHhcC----------CCCE
Confidence 346789999999999999999999999999999999999999999999999999999999999875 6999
Q ss_pred EEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhc
Q psy775 215 VWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 294 (1460)
Q Consensus 215 VwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riL 294 (1460)
|||||||||+||+|||++.| +++||||||||||++|+|++||+|++|++|||+||+|||||++|++||+++|.+++
T Consensus 137 vwvhDYhl~l~p~~lr~~~~----~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l 212 (726)
T PRK14501 137 VWVHDYQLMLLPAMLRERLP----DARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVL 212 (726)
T ss_pred EEEeCchhhhHHHHHHhhCC----CCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHc
Confidence 99999999999999998755 89999999999999999999999999999999999999999999999999999999
Q ss_pred CceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch------hhhc--cCCeEEEEecCccccCCHHHHHHHHHHH
Q psy775 295 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP------RVID--TKQKIVLGVDRLDYTKGLVHRLKAFETL 366 (1460)
Q Consensus 295 g~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~------~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af~~l 366 (1460)
+.+.... .++++||.++|.++|+|||++.|.+...... .+++ .++++|++|||+++.||+..+|+||++|
T Consensus 213 ~~~~~~~--~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~l 290 (726)
T PRK14501 213 GYETELG--EIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERF 290 (726)
T ss_pred CCccCCC--eEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHH
Confidence 9776543 4789999999999999999999987653321 1222 6789999999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC
Q psy775 367 LEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL 446 (1460)
Q Consensus 367 L~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl 446 (1460)
++++|+++++++|+|++.|++.+.++|+++++++++++++||++||+.+|.|++++++.+++++++++|++||||++||+
T Consensus 291 l~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~ 370 (726)
T PRK14501 291 LEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPL 370 (726)
T ss_pred HHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEeccc
Confidence 99999999999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCC
Q psy775 447 RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNC 526 (1460)
Q Consensus 447 rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~ 526 (1460)
+||||||++||||||.+. .|++|+|+++|+++++.+|++|||+|++++|+||.++|+|+.++++.|++++++++.+++
T Consensus 371 ~EG~~lv~~Eama~~~~~-~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~- 448 (726)
T PRK14501 371 RDGMNLVAKEYVASRTDG-DGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYD- 448 (726)
T ss_pred ccccCcccceEEEEcCCC-CceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCC-
Confidence 999999999999999876 899999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCCCCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC--
Q psy775 527 PGQSSLGGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP-- 604 (1460)
Q Consensus 527 ~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP-- 604 (1460)
+++ |++.+++.|+++...+.+... .. ....-....+ .++..+.++++++|+-
T Consensus 449 ---------------~~~-w~~~~l~~l~~~~~~~~~~~~-~~-----~~~~~~~~~~----~~y~~~~~rLi~~D~DGT 502 (726)
T PRK14501 449 ---------------VHK-WASDFLDELREAAEKNKAFAS-KP-----ITPAAAEEII----ARYRAASRRLLLLDYDGT 502 (726)
T ss_pred ---------------HHH-HHHHHHHHHHHHHhhhhcccc-cc-----CCccCHHHHH----HHHHhccceEEEEecCcc
Confidence 666 999999999876543211100 00 0001112222 2556677899999993
Q ss_pred ---C-CCccccccCccHHHHHhhccc--CceeecccHhH
Q psy775 605 ---F-PPWDIFRLFPWSDEILQGMLG--CDMVGFHIEDY 637 (1460)
Q Consensus 605 ---f-P~~e~fr~lP~r~eIL~~LL~--aDlIGFqt~~y 637 (1460)
+ ..++...+.+...+.|+.|.. -..|..-|-+.
T Consensus 503 L~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~ 541 (726)
T PRK14501 503 LVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRD 541 (726)
T ss_pred ccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence 2 234455566788889999876 33555555444
No 13
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=2e-83 Score=774.91 Aligned_cols=355 Identities=36% Similarity=0.669 Sum_probs=325.1
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc
Q psy775 534 GNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL 613 (1460)
Q Consensus 534 ~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~ 613 (1460)
..|++|++||++||+++++.++ ++|+||||||||+++|++|| +.+++.+||||||+|||++|+|++
T Consensus 110 ~~w~~Y~~vN~~FA~~i~~~~~----------~~d~vWVhDYhL~llp~~LR----~~~~~~~IgfFlHiPFPs~eifr~ 175 (487)
T TIGR02398 110 DDWQVFLKVNRAFAEAACLEAA----------EGATVWVHDYNLWLVPGYIR----QLRPDLKIAFFHHTPFPSADVFNI 175 (487)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEecchhhHHHHHHH----HhCCCCeEEEEeeCCCCChHHHhh
Confidence 5699999999999999988642 23799999999999999999 667899999999999999999999
Q ss_pred CccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCC-------------------CcEEEECCeEEEEEEeeC
Q psy775 614 FPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRK-------------------NLLVEHGGRTVRIRPLPI 674 (1460)
Q Consensus 614 lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~-------------------~~~i~~~Gr~v~V~v~Pi 674 (1460)
+|++++||+|||+||+|||||++|++||++||+|++|+++..+ ...+.++||+++|+++|+
T Consensus 176 LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~Pi 255 (487)
T TIGR02398 176 LPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPV 255 (487)
T ss_pred CCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEEC
Confidence 9999999999999999999999999999999999999876542 124889999999999999
Q ss_pred CCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccC
Q psy775 675 AIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTK 754 (1460)
Q Consensus 675 GID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~K 754 (1460)
|||++.|.+.+.+ +++. ++.+++|++ +.++++|+||||||++|
T Consensus 256 GID~~~f~~~~~~-~~~~-----------------~~~~~lr~~-------------------~~~~kiIl~VDRLDy~K 298 (487)
T TIGR02398 256 GTDPERIRSALAA-ASIR-----------------EMMERIRSE-------------------LAGVKLILSAERVDYTK 298 (487)
T ss_pred EecHHHHHHHhcC-chHH-----------------HHHHHHHHH-------------------cCCceEEEEeccccccc
Confidence 9999999876553 2222 123445543 25799999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHH
Q psy775 755 GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASF 834 (1460)
Q Consensus 755 Gi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Al 834 (1460)
||++||+||++||++||+|+|||+||||+.|+|+++++|++++++++++|++||++||+.+|+||+|+++.++++++.+|
T Consensus 299 GI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~al 378 (487)
T TIGR02398 299 GILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAW 378 (487)
T ss_pred CHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhh
Q psy775 835 YRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFV 914 (1460)
Q Consensus 835 y~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~ 914 (1460)
|++|||+++||+||||||||+||||||.+. +||||+|||+|+++
T Consensus 379 Yr~ADV~lvT~lrDGmNLVa~Eyva~~~~~-~GvLILSefaGaa~----------------------------------- 422 (487)
T TIGR02398 379 FAMADVMWITPLRDGLNLVAKEYVAAQGLL-DGVLVLSEFAGAAV----------------------------------- 422 (487)
T ss_pred HHhCCEEEECccccccCcchhhHHhhhcCC-CCCEEEeccccchh-----------------------------------
Confidence 999999999999999999999999999865 79999999999887
Q ss_pred hcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHh
Q psy775 915 ACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMG 994 (1460)
Q Consensus 915 ~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 994 (1460)
+|++|++|||||++++|++|++||+||.+||+.|+++++++|.+||+.+|+++||++|.
T Consensus 423 ---------------------~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 423 ---------------------ELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVS 481 (487)
T ss_pred ---------------------hcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 55689999999999999999999999999999999999999999999999999999986
Q ss_pred hh
Q psy775 995 TL 996 (1460)
Q Consensus 995 ~~ 996 (1460)
..
T Consensus 482 ~~ 483 (487)
T TIGR02398 482 PQ 483 (487)
T ss_pred hc
Confidence 43
No 14
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=5.7e-83 Score=772.22 Aligned_cols=355 Identities=52% Similarity=0.917 Sum_probs=283.7
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc
Q psy775 533 GGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 612 (1460)
Q Consensus 533 ~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr 612 (1460)
...|++|++||+.||+++++.++ + +|+||||||||+++|++|| +.+++.+||||||+|||++|+|+
T Consensus 118 ~~~w~~Y~~vN~~FA~~i~~~~~----~------~D~VWVhDYhL~llP~~LR----~~~~~~~IgfFlHiPFPs~e~fr 183 (474)
T PF00982_consen 118 EEWWEAYKRVNRRFADAIAEVYR----P------GDLVWVHDYHLMLLPQMLR----ERGPDARIGFFLHIPFPSSEIFR 183 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG------T------T-EEEEESGGGTTHHHHHH----HTT--SEEEEEE-S----HHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCc----C------CCEEEEeCCcHHHHHHHHH----hhcCCceEeeEEecCCCCHHHHh
Confidence 35799999999999999998764 2 2799999999999999999 67789999999999999999999
Q ss_pred cCccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcccc
Q psy775 613 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692 (1460)
Q Consensus 613 ~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~ 692 (1460)
++|++++||+|||+||+|||||++|++||++||+|++|+++......+.|+||.++|.++|+|||++.|.+.+.+ +++.
T Consensus 184 ~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~-~~v~ 262 (474)
T PF00982_consen 184 CLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS-PEVQ 262 (474)
T ss_dssp TSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH--S---
T ss_pred hCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC-hHHH
Confidence 999999999999999999999999999999999999999887765479999999999999999999999887764 3232
Q ss_pred ccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCC-CEEEEEEcCccccCCHHHHHHHHHHHHHhCC
Q psy775 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTK-QKIVLGVDRLDYTKGLVHRLKAFETLLEKHP 771 (1460)
Q Consensus 693 ~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~-kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P 771 (1460)
++++++|+.+ ++ +++|+||||+|++|||++||+||++||++||
T Consensus 263 -----------------~~~~~l~~~~-------------------~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P 306 (474)
T PF00982_consen 263 -----------------ERAEELREKF-------------------KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYP 306 (474)
T ss_dssp -----------------HHHHHHHHHT-------------------TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-G
T ss_pred -----------------HHHHHHHHhc-------------------CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCc
Confidence 2345555542 45 5999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCC
Q psy775 772 EHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMN 851 (1460)
Q Consensus 772 ~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmn 851 (1460)
+|+|||+|+||+.|+++++++|++++++++++|++||++||+.+|+||+|+++.+++++++|||++|||+++||+|||||
T Consensus 307 ~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmN 386 (474)
T PF00982_consen 307 EYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMN 386 (474)
T ss_dssp GGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--
T ss_pred CccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEecccc
Q psy775 852 LVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFA 931 (1460)
Q Consensus 852 Lva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~ 931 (1460)
|||+||+|||++. +|+||+|||+|+++
T Consensus 387 Lva~Eyva~q~~~-~GvLiLSefaGaa~---------------------------------------------------- 413 (474)
T PF00982_consen 387 LVAKEYVACQDDN-PGVLILSEFAGAAE---------------------------------------------------- 413 (474)
T ss_dssp HHHHHHHHHS-TS---EEEEETTBGGGG----------------------------------------------------
T ss_pred CcceEEEEEecCC-CCceEeeccCCHHH----------------------------------------------------
Confidence 9999999999885 89999999999888
Q ss_pred CCccccc-ceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhh
Q psy775 932 GAGEQMH-EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 932 G~~~~l~-~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 995 (1460)
+|+ +|++|||||++++|+||++||+||++||+.|+++++++|.+||+.+|+++||++|++
T Consensus 414 ----~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 414 ----QLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp ----T-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred ----HcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 344 679999999999999999999999999999999999999999999999999999874
No 15
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=6.8e-81 Score=795.76 Aligned_cols=466 Identities=34% Similarity=0.558 Sum_probs=399.9
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc
Q psy775 534 GNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL 613 (1460)
Q Consensus 534 ~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~ 613 (1460)
..|++|++||++||+++.+.++ ++|+||||||||+++|++|| +.+++.+||||||+|||++|+|++
T Consensus 125 ~~w~~Y~~vN~~FA~~i~~~~~----------~~d~vWvhDYhL~llp~~lR----~~~~~~~igfFlHiPFPs~e~fr~ 190 (797)
T PLN03063 125 SQYDAYKKANRMFLDVVKENYE----------EGDVVWCHDYHLMFLPQYLK----EYNNKMKVGWFLHTPFPSSEIYKT 190 (797)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEecchhhhHHHHHH----HhCCCCcEEEEecCCCCCHHHHhh
Confidence 4699999999999999998752 23799999999999999999 668899999999999999999999
Q ss_pred CccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccc
Q psy775 614 FPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID 693 (1460)
Q Consensus 614 lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~ 693 (1460)
+|+|++||++||+||+|||||++|+|||+++|+|++|+++... .+.++|+.++|.++|+|||++.|.+.... +.+.
T Consensus 191 lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~--~i~~~gr~~~I~viP~GID~~~f~~~~~~-~~~~- 266 (797)
T PLN03063 191 LPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE--GVVDQGKVTRVAVFPIGIDPERFINTCEL-PEVK- 266 (797)
T ss_pred CCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC--ceEECCeEEEEEEEecccCHHHHHHHhcC-hhHH-
Confidence 9999999999999999999999999999999999999876654 47899999999999999999999865442 2111
Q ss_pred cchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCC
Q psy775 694 TKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH 773 (1460)
Q Consensus 694 ~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~ 773 (1460)
++.+.+|+. +.++++|++|||||+.||+.++|+||++||++||++
T Consensus 267 ----------------~~~~~lr~~-------------------~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~ 311 (797)
T PLN03063 267 ----------------QHMKELKRF-------------------FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEW 311 (797)
T ss_pred ----------------HHHHHHHHh-------------------cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccc
Confidence 111233322 257899999999999999999999999999999999
Q ss_pred CCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCcc
Q psy775 774 LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLV 853 (1460)
Q Consensus 774 ~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLv 853 (1460)
+++++|+|++.|+++++++|+++++++++++++||++||+.+|.||+|+.+.++.+|+.++|++|||||+||++||||||
T Consensus 312 ~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv 391 (797)
T PLN03063 312 RDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLV 391 (797)
T ss_pred cCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCC
Q psy775 854 AKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGA 933 (1460)
Q Consensus 854 a~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~ 933 (1460)
++|||||+.+. +|++|+|||+|+++.++
T Consensus 392 ~lEamA~g~p~-~gvlVlSe~~G~~~~l~--------------------------------------------------- 419 (797)
T PLN03063 392 SYEFVACQKAK-KGVLVLSEFAGAGQSLG--------------------------------------------------- 419 (797)
T ss_pred hhhHheeecCC-CCCEEeeCCcCchhhhc---------------------------------------------------
Confidence 99999999876 89999999999887211
Q ss_pred cccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhccCC-------CCCc
Q psy775 934 GEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDGD-------DVLP 1006 (1460)
Q Consensus 934 ~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~-------~~~~ 1006 (1460)
.+|++|||||++++|++|.+||+|+++||+.|++++++++.+||+.+|+++|+++|.....++.. .+..
T Consensus 420 ----~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~~~~~l~~ 495 (797)
T PLN03063 420 ----AGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRNIPLELPE 495 (797)
T ss_pred ----CCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCH
Confidence 46899999999999999999999999999999999999999999999999999999988753321 1223
Q ss_pred ccchHHhHhhhhcceeeeec----cC----C-------CccccccccChHHHHHHhhhc----------ccchhhhhhhc
Q psy775 1007 TTLIADEQNLKFKLGFFLHI----PF----P-------PWDIFRLFPWSDEILQGMLGK----------ASLGLLSWLCN 1061 (1460)
Q Consensus 1007 ~~~~~~~~~~k~~~~f~~~i----~e----~-------~~~~~~~~~~~~~il~~l~~~----------~~~~~~~~l~~ 1061 (1460)
..+...|+++++++ ||+++ .. | |++ +++ ++|+.||+. +++..|+.+..
T Consensus 496 ~~~~~~y~~a~~rl-l~LDyDGTL~~~~~~~~~p~~a~p~~--~l~----~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 496 QDVIQQYSKSNNRL-LILGFYGTLTEPRNSQIKEMDLGLHP--ELK----ETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred HHHHHHHHhccCeE-EEEecCccccCCCCCccccccCCCCH--HHH----HHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 56678899999995 77765 11 1 333 455 788999875 56677888887
Q ss_pred cccccccccCceeccceeeecC-CCCcccc-c--cCCChHHHhh----------c---ccccceeeeecccccccc
Q psy775 1062 TIKNIADEQNLKFKLGFFLHIP-FPPWDIF-R--LFPWSDEILQ----------G---MLGCDMVGFHIEDYCLNF 1120 (1460)
Q Consensus 1062 ~~~n~~~~~~l~ae~g~~~r~~-~~~~~~~-~--~~~~~~~~~~----------~---~~~~~~~~~~~~~~~~~~ 1120 (1460)
.+ |+ ||+||||+|+|.+ |.|.... . +.+|++.+.. | ......+.||..++...|
T Consensus 569 ~~-~l----~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~ 639 (797)
T PLN03063 569 EY-NI----WLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEF 639 (797)
T ss_pred CC-CC----cEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHH
Confidence 65 78 9999999999954 4777542 3 5789976643 4 446678999999996555
No 16
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-81 Score=748.86 Aligned_cols=354 Identities=46% Similarity=0.827 Sum_probs=322.6
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc
Q psy775 533 GGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 612 (1460)
Q Consensus 533 ~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr 612 (1460)
..+|..|++||++||+++++.++ ++|+||||||||+|+|++|| +.+++++||||||+|||++|+|+
T Consensus 124 ~~~w~~Y~~vN~~FAd~i~~~~~----------~gDiIWVhDYhL~L~P~mlR----~~~~~~~IgfFlHiPfPssEvfr 189 (486)
T COG0380 124 RNWWDAYVKVNRKFADKIVEIYE----------PGDIIWVHDYHLLLVPQMLR----ERIPDAKIGFFLHIPFPSSEVFR 189 (486)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEEechhhhhHHHHH----HhCCCceEEEEEeCCCCCHHHHh
Confidence 56799999999999999999763 23799999999999999999 67899999999999999999999
Q ss_pred cCccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEE---ECCeEEEEEEeeCCCChhHHhHHHhcCc
Q psy775 613 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVE---HGGRTVRIRPLPIAIPYERFVQLAQAAP 689 (1460)
Q Consensus 613 ~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~---~~Gr~v~V~v~PiGID~~~f~~~~~~~~ 689 (1460)
|+|+|++||+|||+||+|||||++|++||++||+|+++.+... .+. ++|+.++|..+|||||+..|...+.+.
T Consensus 190 ~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~---~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~- 265 (486)
T COG0380 190 CLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDA---DIRFNGADGRIVKVGAFPIGIDPEEFERALKSP- 265 (486)
T ss_pred hCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccc---cccccccCCceEEEEEEeeecCHHHHHHhhcCC-
Confidence 9999999999999999999999999999999999999865221 233 448999999999999999998876542
Q ss_pred cccccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHh
Q psy775 690 RVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEK 769 (1460)
Q Consensus 690 ~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~ 769 (1460)
.+. .+..++++.+ ..++++|++|||||++||+++||+||++||++
T Consensus 266 ~v~-----------------~~~~el~~~~------------------~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~ 310 (486)
T COG0380 266 SVQ-----------------EKVLELKAEL------------------GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEE 310 (486)
T ss_pred chh-----------------hHHHHHHHHh------------------cCCceEEEEehhcccccCcHHHHHHHHHHHHh
Confidence 221 1223444432 24599999999999999999999999999999
Q ss_pred CCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccC
Q psy775 770 HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDG 849 (1460)
Q Consensus 770 ~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEG 849 (1460)
||+|+|||+|+|++.||+++.++|+.++++++++|++||++||+.+|+||+|+++.+++++++|||++||++++||+|||
T Consensus 311 ~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDG 390 (486)
T COG0380 311 YPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDG 390 (486)
T ss_pred ChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEecc
Q psy775 850 MNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSP 929 (1460)
Q Consensus 850 mnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~se 929 (1460)
||||++||+|||..+ +|+||+|||+|++.
T Consensus 391 MNLvakEyVa~q~~~-~G~LiLSeFaGaa~-------------------------------------------------- 419 (486)
T COG0380 391 MNLVAKEYVAAQRDK-PGVLILSEFAGAAS-------------------------------------------------- 419 (486)
T ss_pred ccHHHHHHHHhhcCC-CCcEEEeccccchh--------------------------------------------------
Confidence 999999999999854 89999999999887
Q ss_pred ccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 930 FAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 930 f~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
.|.+|++|||||.+++|++|++||+|+.+||+.|++.|++.|.+||+++|+.+|+++|...
T Consensus 420 ------~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 420 ------ELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred ------hhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 5567999999999999999999999999999999999999999999999999999999873
No 17
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=1.1e-77 Score=730.38 Aligned_cols=388 Identities=51% Similarity=0.903 Sum_probs=360.3
Q ss_pred HHhhccCceeeecCcccccccccccccccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCC
Q psy775 134 LKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTP 213 (1460)
Q Consensus 134 ~~L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gD 213 (1460)
....+++|.||++++++++.||+||||++|||+|||.++...|++++|++|++||++||++|++.++ ++|
T Consensus 64 ~~~~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~----------~~d 133 (460)
T cd03788 64 ELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVLR----------PGD 133 (460)
T ss_pred hhcCCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccCHHHHHHHHHHHHHHHHHHHHhcC----------CCC
Confidence 3456789999999999999999999999999999999999999999999999999999999999875 699
Q ss_pred EEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhh
Q psy775 214 LVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRR 293 (1460)
Q Consensus 214 vVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~ri 293 (1460)
+||||||||+++|++||++.| +++||||||||||++|+|+++|+|++|++|||+||+||||+++|++||+++|+++
T Consensus 134 ~iwihDyhl~llp~~lr~~~~----~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~ 209 (460)
T cd03788 134 LVWVHDYHLLLLPQMLRERGP----DARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRL 209 (460)
T ss_pred EEEEeChhhhHHHHHHHhhCC----CCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHH
Confidence 999999999999999998754 8999999999999999999999999999999999999999999999999999999
Q ss_pred cCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch------hhhc--cCCeEEEEecCccccCCHHHHHHHHHH
Q psy775 294 LGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP------RVID--TKQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 294 Lg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~------~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
++.+.... ..+.++|+.++|.++|+|||++.|.+...... +... .++++|++|||+++.||+..+|+||++
T Consensus 210 l~~~~~~~-~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ 288 (460)
T cd03788 210 LGLEVTDD-GGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFER 288 (460)
T ss_pred cCCcccCC-ceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHH
Confidence 98876542 35889999999999999999999986543221 1112 678999999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
+++++|+++++++|+|++.|+++++++|+++++++++++++||.+||..+|.||+++.|.++.+++.++|++||+||+||
T Consensus 289 ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS 368 (460)
T cd03788 289 LLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTP 368 (460)
T ss_pred HHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 446 LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.+||||||++|||||+.|. +|++|+|+++|+++++.+|++|||+|++++|+||.++|+|++++++.+++++++.+.+++
T Consensus 369 ~~Eg~~lv~lEAma~g~p~-~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~ 447 (460)
T cd03788 369 LRDGMNLVAKEYVACQDDD-PGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHD 447 (460)
T ss_pred cccccCcccceeEEEecCC-CceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999995 899999999999999888999999999999999999999999999999999999999888
Q ss_pred CCCCCCCCCcchhhhhhhHHHHHHHHHHH
Q psy775 526 CPGQSSLGGNTSAYAQVNQEFADKTIKAL 554 (1460)
Q Consensus 526 ~~~~~sl~~~~~~Y~~VNq~fAd~~le~l 554 (1460)
+++ |+++++..+
T Consensus 448 ----------------~~~-w~~~~l~~l 459 (460)
T cd03788 448 ----------------VQA-WANSFLDDL 459 (460)
T ss_pred ----------------HHH-HHHHHHHhh
Confidence 555 999988653
No 18
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=5.1e-76 Score=750.58 Aligned_cols=497 Identities=38% Similarity=0.647 Sum_probs=412.0
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc
Q psy775 534 GNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL 613 (1460)
Q Consensus 534 ~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~ 613 (1460)
..|++|+++|++||+++.+.++ + +|+||||||||+++|++|| +.+++.+||||||+|||++++|++
T Consensus 111 ~~w~~Y~~vN~~fA~~~~~~~~---~-------~d~vwvhDYhl~l~p~~lr----~~~~~~~igfFlH~pfP~~~~f~~ 176 (726)
T PRK14501 111 RFWESYERVNQRFAEAIAAIAR---P-------GDVVWVHDYQLMLLPAMLR----ERLPDARIGFFLHIPFPSFEVFRL 176 (726)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC---C-------CCEEEEeCchhhhHHHHHH----hhCCCCcEEEEeeCCCCChHHHhh
Confidence 4699999999999999998653 2 2799999999999999999 667899999999999999999999
Q ss_pred CccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccc
Q psy775 614 FPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID 693 (1460)
Q Consensus 614 lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~ 693 (1460)
+|++++||++||+||+|||||++|++||++||+|++++++... .+.++||.++|.++|+|||++.|.+.... +.+.
T Consensus 177 lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~--~~~~~gr~~~v~v~p~GID~~~f~~~~~~-~~~~- 252 (726)
T PRK14501 177 LPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG--EIRLGGRIVRVDAFPMGIDYDKFHNSAQD-PEVQ- 252 (726)
T ss_pred CCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC--eEEECCEEEEEEEEECeEcHHHHHHHhcC-chHH-
Confidence 9999999999999999999999999999999999999876543 58899999999999999999999876542 2111
Q ss_pred cchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCC
Q psy775 694 TKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH 773 (1460)
Q Consensus 694 ~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~ 773 (1460)
+..+++|+. ..++++|++|||+++.||+..+|+||++|+++||++
T Consensus 253 ----------------~~~~~lr~~-------------------~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~ 297 (726)
T PRK14501 253 ----------------EEIRRLRQD-------------------LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEW 297 (726)
T ss_pred ----------------HHHHHHHHH-------------------cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccc
Confidence 112233322 267899999999999999999999999999999999
Q ss_pred CCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCcc
Q psy775 774 LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLV 853 (1460)
Q Consensus 774 ~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLv 853 (1460)
+|+++|+|++.|++.+.++|+++++++++++++||++||+.+|.|++++++.++++|++++|++||||++||++||||||
T Consensus 298 ~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv 377 (726)
T PRK14501 298 RGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLV 377 (726)
T ss_pred cCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcc
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCC
Q psy775 854 AKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGA 933 (1460)
Q Consensus 854 a~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~ 933 (1460)
++|||||+.+. +|++|+|+++|++.
T Consensus 378 ~~Eama~~~~~-~g~~vls~~~G~~~------------------------------------------------------ 402 (726)
T PRK14501 378 AKEYVASRTDG-DGVLILSEMAGAAA------------------------------------------------------ 402 (726)
T ss_pred cceEEEEcCCC-CceEEEecccchhH------------------------------------------------------
Confidence 99999999875 78999999999777
Q ss_pred cccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhccCC---CCC----c
Q psy775 934 GEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDGD---DVL----P 1006 (1460)
Q Consensus 934 ~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~---~~~----~ 1006 (1460)
++.+|++|||||++++|++|.++|+|+.+|++.|++++++++.++|+.+|+++|++.+.+.+.++.. ..+ .
T Consensus 403 --~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 480 (726)
T PRK14501 403 --ELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFASKPITPAAA 480 (726)
T ss_pred --HhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhccccccCCccCH
Confidence 2345799999999999999999999999999999999999999999999999999999998754321 111 2
Q ss_pred ccchHHhHhhhhcceeeeec----c----C----CCccccccccChHHHHHHhhhc----------ccchhhhhhhcccc
Q psy775 1007 TTLIADEQNLKFKLGFFLHI----P----F----PPWDIFRLFPWSDEILQGMLGK----------ASLGLLSWLCNTIK 1064 (1460)
Q Consensus 1007 ~~~~~~~~~~k~~~~f~~~i----~----e----~~~~~~~~~~~~~~il~~l~~~----------~~~~~~~~l~~~~~ 1064 (1460)
..+...|+.+|+|+ |++++ . . .|+. +++ +.|+.|+++ +++..++.++..+
T Consensus 481 ~~~~~~y~~~~~rL-i~~D~DGTL~~~~~~~~~~~~~~--~~~----~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~- 552 (726)
T PRK14501 481 EEIIARYRAASRRL-LLLDYDGTLVPFAPDPELAVPDK--ELR----DLLRRLAADPNTDVAIISGRDRDTLERWFGDL- 552 (726)
T ss_pred HHHHHHHHhccceE-EEEecCccccCCCCCcccCCCCH--HHH----HHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-
Confidence 46678899999995 77776 1 1 1333 455 778899883 4667777777665
Q ss_pred ccccccCceeccceeeecCC-CCccccc-cCCChHHHhh----------c---ccccceeeeeccccccccccc----cc
Q psy775 1065 NIADEQNLKFKLGFFLHIPF-PPWDIFR-LFPWSDEILQ----------G---MLGCDMVGFHIEDYCLNFVDC----CQ 1125 (1460)
Q Consensus 1065 n~~~~~~l~ae~g~~~r~~~-~~~~~~~-~~~~~~~~~~----------~---~~~~~~~~~~~~~~~~~~~~~----~~ 1125 (1460)
++ ++++|||+|+|.+| .|..... +.+|++.+.+ | .-.+..+.||..+++..|... +.
T Consensus 553 ~l----~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~ 628 (726)
T PRK14501 553 PI----HLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELI 628 (726)
T ss_pred Ce----EEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHH
Confidence 56 89999999999766 6766554 6789866553 2 112345789999887666443 22
Q ss_pred ccccccccccccccccCCeEEEEeccc
Q psy775 1126 RRLGCRVDRKNLLVEHGGRTVRIRPLP 1152 (1460)
Q Consensus 1126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1152 (1460)
..+-..+...++-+-+++..+.|+|--
T Consensus 629 ~~l~~~~~~~~~~v~~g~~~veV~p~~ 655 (726)
T PRK14501 629 LALSSLLSNAPLEVLRGNKVVEVRPAG 655 (726)
T ss_pred HHHHHHhcCCCeEEEECCeEEEEEECC
Confidence 222222333444445677778888753
No 19
>KOG1050|consensus
Probab=100.00 E-value=9.4e-73 Score=701.65 Aligned_cols=489 Identities=36% Similarity=0.547 Sum_probs=435.3
Q ss_pred cchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccC
Q psy775 535 NTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLF 614 (1460)
Q Consensus 535 ~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~l 614 (1460)
.|.+|..+|+.|++++++.|+ + +|+||||||||+++|.++| +...+.+|+||+|.|||++|+++++
T Consensus 119 ~w~~y~~~n~~f~d~ive~~~----~------~d~vwihdyhlmllp~~lr----~~~~~~~ig~flhspfpssEi~r~l 184 (732)
T KOG1050|consen 119 LWKAYVKVNQAFADKIVEVYE----E------GDIVWIHDYHLMLLPQMLR----ERFNSAKIGFFLHSPFPSSEIYRCL 184 (732)
T ss_pred HHHHHHHHhHHHHHHHHHhcc----C------CCcEEEEcchhhccchhhh----cccccceEEEeccCCCChHHHHHhc
Confidence 588999999999999999875 2 2799999999999999999 5668899999999999999999999
Q ss_pred ccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeC--CCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcccc
Q psy775 615 PWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDR--KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692 (1460)
Q Consensus 615 P~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~--~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~ 692 (1460)
|.+++||++|++||+|||||++|+|||++||.|++|.++.+ ....+.+.||.+.|.+.|+|||+.+|.+.... +.+.
T Consensus 185 p~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~-~~~~ 263 (732)
T KOG1050|consen 185 PVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLEL-PYVG 263 (732)
T ss_pred ccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccc-hhHH
Confidence 99999999999999999999999999999999999988763 34568999999999999999999999887653 2222
Q ss_pred ccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCC
Q psy775 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE 772 (1460)
Q Consensus 693 ~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~ 772 (1460)
.+..+++. + ..++++|++|||+|+.||+.+|+.||++||++||+
T Consensus 264 -----------------~~~~ei~~-------~------------~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe 307 (732)
T KOG1050|consen 264 -----------------SKGMEIKE-------P------------FKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPE 307 (732)
T ss_pred -----------------HHHHHHhh-------h------------ccCCceEecccccccccCchHHHHHHHHHHHhChh
Confidence 22333332 2 26899999999999999999999999999999999
Q ss_pred CCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCc
Q psy775 773 HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNL 852 (1460)
Q Consensus 773 ~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnL 852 (1460)
|+++|+++|++.|+++++++|++++.++...+.+||++||+..+.||+++...++..++.|+|.+||+++++++||||||
T Consensus 308 ~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl 387 (732)
T KOG1050|consen 308 WIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNL 387 (732)
T ss_pred hhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccC
Q psy775 853 VAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAG 932 (1460)
Q Consensus 853 va~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G 932 (1460)
+++||++|+.++ .+++|+|||+|+++
T Consensus 388 ~~~e~i~~~~~~-~~~lVlsef~G~~~----------------------------------------------------- 413 (732)
T KOG1050|consen 388 VFLEYILCQENK-KSVLVLSEFIGDDT----------------------------------------------------- 413 (732)
T ss_pred hhhHHHHhhccc-CCceEEeeeccccc-----------------------------------------------------
Confidence 999999998765 57777777777666
Q ss_pred Ccccc-cceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhhccC--CCCC----
Q psy775 933 AGEQM-HEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDG--DDVL---- 1005 (1460)
Q Consensus 933 ~~~~l-~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~--~~~~---- 1005 (1460)
++ ++++++||||.+++|.+|..|++|+.++++.|+..+++++..|++..|++.|+..+.+.+.... ..+.
T Consensus 414 ---tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~~~~~~~~~l~ 490 (732)
T KOG1050|consen 414 ---TLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGFLGFRVTPLLT 490 (732)
T ss_pred ---cccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhcccccccccccC
Confidence 45 7889999999999999999999999999999999999999999999999999998888775432 2333
Q ss_pred cccchHHhHhhhhcceeeee---ccCCCccccccccChHHHHHHhhhc----------ccchhhhhhhccccccccccCc
Q psy775 1006 PTTLIADEQNLKFKLGFFLH---IPFPPWDIFRLFPWSDEILQGMLGK----------ASLGLLSWLCNTIKNIADEQNL 1072 (1460)
Q Consensus 1006 ~~~~~~~~~~~k~~~~f~~~---i~e~~~~~~~~~~~~~~il~~l~~~----------~~~~~~~~l~~~~~n~~~~~~l 1072 (1460)
.+.++.+|+++|+|+ |+++ +..+|.++. ++ ++|++||+. .++..|+.++..++|| ||
T Consensus 491 ~~~~i~~y~~s~~rl-i~ldyd~t~~~~~~~~-~~----~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~l----gl 560 (732)
T KOG1050|consen 491 AEHIVSDYKKSKKRL-ILLDYDLTLIPPRSIK-AI----SILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNL----GL 560 (732)
T ss_pred hhHhhhhhhhccceE-EEecccccccCCCCch-HH----HHHHHHhcCCCCeEEEEEccCchhhhhhccccccc----ee
Confidence 378889999999995 9998 788888843 55 999999987 5779998899999999 99
Q ss_pred eeccceeeecCCCCccccccCCChHHHh---h-------c---ccccceeeeeccccccccccccccccccccccccccc
Q psy775 1073 KFKLGFFLHIPFPPWDIFRLFPWSDEIL---Q-------G---MLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLV 1139 (1460)
Q Consensus 1073 ~ae~g~~~r~~~~~~~~~~~~~~~~~~~---~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1139 (1460)
+||||+|+|+++.|+|.+.+++|++.+- | | ...++++.||.+|| | .++..-+.++..+|+|+
T Consensus 561 ~aEhG~f~r~~~~w~~~~~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~a-d--~~~g~~qA~el~~~l~~-- 635 (732)
T KOG1050|consen 561 AAEHGYFVRIPGKWETCVLDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRNA-D--PEFGELQAKELLEHLES-- 635 (732)
T ss_pred ecccCceeccCCceeeecccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeecc-C--cchhHHHHHHHHHHhcc--
Confidence 9999999999999999999999995543 3 5 67899999999999 7 78888888999999999
Q ss_pred ccCCeEE
Q psy775 1140 EHGGRTV 1146 (1460)
Q Consensus 1140 ~~~~~~~ 1146 (1460)
.+.|..|
T Consensus 636 ~~~~~~v 642 (732)
T KOG1050|consen 636 KNEPVEV 642 (732)
T ss_pred cCCCeEE
Confidence 5655544
No 20
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=7.3e-72 Score=676.51 Aligned_cols=351 Identities=50% Similarity=0.844 Sum_probs=320.7
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc
Q psy775 534 GNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL 613 (1460)
Q Consensus 534 ~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~ 613 (1460)
..|++|++||++||+++.+.++ ++|+||||||||+++|.+|| +.+++.+|+||||+|||++|+|++
T Consensus 105 ~~w~~Y~~vN~~fA~~i~~~~~----------~~d~vwvhDYhl~l~p~~lr----~~~~~~~igfFlHipfP~~e~f~~ 170 (456)
T TIGR02400 105 KAWEAYRRVNRLFAEALAPLLQ----------PGDIVWVHDYHLMLLPAMLR----ELGVQNKIGFFLHIPFPSSEIYRT 170 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC----------CCCEEEEecchhhHHHHHHH----hhCCCCeEEEEEeCCCCChHHHhh
Confidence 4699999999999999998653 23799999999999999999 667889999999999999999999
Q ss_pred CccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccc
Q psy775 614 FPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID 693 (1460)
Q Consensus 614 lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~ 693 (1460)
+|++++||+|||+||+|||||++|++||++||++++|.++..+. +.++|+.++|.++|+|||++.|.+.... +.+.
T Consensus 171 lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~--~~~~g~~~~v~viP~GID~~~f~~~~~~-~~~~- 246 (456)
T TIGR02400 171 LPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNG--VESGGRTVRVGAFPIGIDVDRFAEQAKK-PSVQ- 246 (456)
T ss_pred CCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCc--eEECCcEEEEEEecCcCCHHHHHHHhcC-hhHH-
Confidence 99999999999999999999999999999999999999887653 7789999999999999999999876542 2111
Q ss_pred cchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCC
Q psy775 694 TKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH 773 (1460)
Q Consensus 694 ~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~ 773 (1460)
+..+.+|+. +.++++|++|||+++.||++.+|+||++|++++|++
T Consensus 247 ----------------~~~~~lr~~-------------------~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~ 291 (456)
T TIGR02400 247 ----------------KRIAELRES-------------------LKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEW 291 (456)
T ss_pred ----------------HHHHHHHHH-------------------cCCCeEEEEccccccccCHHHHHHHHHHHHHhCccc
Confidence 112334432 257899999999999999999999999999999999
Q ss_pred CCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCcc
Q psy775 774 LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLV 853 (1460)
Q Consensus 774 ~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLv 853 (1460)
++|++|+|++.|+++++++|+++++++++++++||++||+.+|.|++++.+.++++|++++|++|||||+||++||||||
T Consensus 292 ~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv 371 (456)
T TIGR02400 292 RGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLV 371 (456)
T ss_pred cCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCC
Q psy775 854 AKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGA 933 (1460)
Q Consensus 854 a~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~ 933 (1460)
++|||||+.+. +|+||+|+++|+++
T Consensus 372 ~lEamA~g~P~-~g~vVlS~~~G~~~------------------------------------------------------ 396 (456)
T TIGR02400 372 AKEYVAAQDPK-DGVLILSEFAGAAQ------------------------------------------------------ 396 (456)
T ss_pred HHHHHHhcCCC-CceEEEeCCCCChH------------------------------------------------------
Confidence 99999999887 59999999999887
Q ss_pred cccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHh
Q psy775 934 GEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMG 994 (1460)
Q Consensus 934 ~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 994 (1460)
.+.+|++|||||++++|++|.++|+|+.+||+.|++++++++.+||+.+|+++|+++|.
T Consensus 397 --~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 397 --ELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred --HhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 22357999999999999999999999999999999999999999999999999999875
No 21
>KOG1050|consensus
Probab=100.00 E-value=7.2e-64 Score=622.41 Aligned_cols=445 Identities=38% Similarity=0.618 Sum_probs=386.5
Q ss_pred HHHhhccCceeeecCcccccccccccccccccccccCC--CCcc---ccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCC
Q psy775 133 LLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSM--PDRA---MFCAEHWRAYAQVNQEFADKTIKALQILAQEEP 207 (1460)
Q Consensus 133 i~~L~q~~~~pVfLdeee~~~yY~gF~n~~LWPlfH~~--~d~~---~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~ 207 (1460)
.......++.|++.+++....+|++|||+.|||+|||. +... .|+.+.|++|+++|++||++|++.|+
T Consensus 67 ~~~~~~~~~~pv~~~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~~~~~~~w~~y~~~n~~f~d~ive~~~------- 139 (732)
T KOG1050|consen 67 QELLEEFDSVPVFLDDELFDSYYNGYCKSILWPLFHYMLIPSEPAFKLFDLELWKAYVKVNQAFADKIVEVYE------- 139 (732)
T ss_pred hhhhhhcCceeeecCCchhhhhhhhhhhhcccceeecccCCCchhhhhhHHHHHHHHHHHhHHHHHHHHHhcc-------
Confidence 44466789999999999999999999999999999998 3332 34588999999999999999999986
Q ss_pred CCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHH
Q psy775 208 ADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 208 ~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL 287 (1460)
+||+|||||||||++|+|+|++.. +++||||+|.|||++|+|+|+|.|++|+.||++||+||||+++|+|||+
T Consensus 140 ---~~d~vwihdyhlmllp~~lr~~~~----~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFl 212 (732)
T KOG1050|consen 140 ---EGDIVWIHDYHLMLLPQMLRERFN----SAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFL 212 (732)
T ss_pred ---CCCcEEEEcchhhccchhhhcccc----cceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHH
Confidence 599999999999999999998764 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCceecC--CCcEEEECCeEEEEEEeecccCchhhhhhhccch------hhhc--cCCeEEEEecCccccCCHH
Q psy775 288 DCCQRRLGCRVDR--KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP------RVID--TKQKIVLGVDRLDYTKGLV 357 (1460)
Q Consensus 288 ~~~~riLg~~~~~--~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~------~~~~--~~~kvIL~VgRLd~~KGI~ 357 (1460)
++|.|+++.++.. +..++.+.||.+.|.+.|+|||+.+|........ ++.. +|+++|++|||+|+.||+.
T Consensus 213 s~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~ 292 (732)
T KOG1050|consen 213 STCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQ 292 (732)
T ss_pred HHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCch
Confidence 9999999987763 3456899999999999999999999977644322 2222 6899999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh
Q psy775 358 HRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 437 (1460)
Q Consensus 358 ~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~a 437 (1460)
+++.||++++++||+++++|+++|++.|++.++++|++++.++...+.+||++||+..+.||+++...++..++.++|..
T Consensus 293 ~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~V 372 (732)
T KOG1050|consen 293 LKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKV 372 (732)
T ss_pred HHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc-cccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Q psy775 438 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM-HEALICNPYEIDAAAEVIHRALTMPEDERTLRMNY 516 (1460)
Q Consensus 438 ADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L-~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~ 516 (1460)
||+++++|++|||||+++||++|+... .|++|+|+|+|+++.+ .+++++||||.++++.+|..+|+|+.++++.|+..
T Consensus 373 aev~~v~s~rdGmnl~~~e~i~~~~~~-~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~ 451 (732)
T KOG1050|consen 373 AEVCPVTSWRDGMNLVFLEYILCQENK-KSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPK 451 (732)
T ss_pred hhheeecccccccchhhhHHHHhhccc-CCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchh
Confidence 999999999999999999999999875 8999999999999999 67999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHhhccCCC-CCCCCceeeccccccccHHHHHHHHhhcCcCc
Q psy775 517 LRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKTIKALQILAQEEPA-DSGTPLVWIHDYHLMLAANTIRNIADEQNLKF 595 (1460)
Q Consensus 517 l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s-~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~ 595 (1460)
....+..++ + ..|+..++..+.++...+.. .+..+ + +.+..+- ..++.+.
T Consensus 452 ~~~~v~~~~----------------~-~~W~~~~~~~l~~~~~~~~~~~~~~~------~---l~~~~~i---~~y~~s~ 502 (732)
T KOG1050|consen 452 HYKYVSTHD----------------V-VYWAKSFLQGLKRIWKVGFLGFRVTP------L---LTAEHIV---SDYKKSK 502 (732)
T ss_pred hhhhhcchh----------------H-HHHHHHHHHhhhhhhhhccccccccc------c---cChhHhh---hhhhhcc
Confidence 999988777 3 34888888865554433211 11111 1 2223222 2677889
Q ss_pred eEEEEeeC---CC-CCccccccCccHHHHHhhcccC
Q psy775 596 KLGFFLHI---PF-PPWDIFRLFPWSDEILQGMLGC 627 (1460)
Q Consensus 596 kigfFLHi---Pf-P~~e~fr~lP~r~eIL~~LL~a 627 (1460)
++.|+|+| +. |.+.. ...+|+.|+.-
T Consensus 503 ~rli~ldyd~t~~~~~~~~------~~~~l~~L~~d 532 (732)
T KOG1050|consen 503 KRLILLDYDLTLIPPRSIK------AISILKDLCSD 532 (732)
T ss_pred ceEEEecccccccCCCCch------HHHHHHHHhcC
Confidence 99999996 43 33332 66777775543
No 22
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=9.1e-63 Score=599.62 Aligned_cols=353 Identities=52% Similarity=0.922 Sum_probs=318.0
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc
Q psy775 533 GGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR 612 (1460)
Q Consensus 533 ~~~~~~Y~~VNq~fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr 612 (1460)
...|++|+++|+.||+++.+.++ +.|+||||||||+++|.++| +.+++.+++||+|+|||++++|+
T Consensus 108 ~~~w~~Y~~vN~~fa~~i~~~~~----------~~d~iwihDyhl~llp~~lr----~~~~~~~i~~f~HipfP~~e~~~ 173 (460)
T cd03788 108 REDWEAYVRVNRKFADAIAEVLR----------PGDLVWVHDYHLLLLPQMLR----ERGPDARIGFFLHIPFPSSEIFR 173 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----------CCCEEEEeChhhhHHHHHHH----hhCCCCeEEEEEeCCCCChHHHh
Confidence 46799999999999999998653 23799999999999999999 56788999999999999999999
Q ss_pred cCccHHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCcccc
Q psy775 613 LFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 692 (1460)
Q Consensus 613 ~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~ 692 (1460)
++|++++||++|++||+|||||++|++||+++|+++++.+... ...+.++|+.++|.++|+|||++.|.+.... +...
T Consensus 174 ~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~-~~~i~~~g~~~~i~vip~GID~~~f~~~~~~-~~~~ 251 (460)
T cd03788 174 CLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTD-DGGVEYGGRRVRVGAFPIGIDPDAFRKLAAS-PEVQ 251 (460)
T ss_pred hCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccC-CceEEECCEEEEEEEEeCeEcHHHHHHHhcC-chhH
Confidence 9999999999999999999999999999999999999887654 2468999999999999999999999865432 1111
Q ss_pred ccchhhhccccccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCC
Q psy775 693 DTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE 772 (1460)
Q Consensus 693 ~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~ 772 (1460)
+.+++.. ....++++|++|||+++.||+..+|+||+++++++|+
T Consensus 252 --------------------~~~~~~~----------------~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~ 295 (460)
T cd03788 252 --------------------ERAAELR----------------ERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPE 295 (460)
T ss_pred --------------------HHHHHHH----------------HhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChh
Confidence 1111110 0136789999999999999999999999999999999
Q ss_pred CCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCc
Q psy775 773 HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNL 852 (1460)
Q Consensus 773 ~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnL 852 (1460)
++++++|+|+|.|+++++++|+++++++++++++||.+||+.+|.|++++.|.++.+++.++|++|||+|+||.+|||||
T Consensus 296 ~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~l 375 (460)
T cd03788 296 WRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNL 375 (460)
T ss_pred hcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccC
Q psy775 853 VAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAG 932 (1460)
Q Consensus 853 va~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G 932 (1460)
|++|||||+.+. +|+||+|+++|+++
T Consensus 376 v~lEAma~g~p~-~g~vV~S~~~G~~~----------------------------------------------------- 401 (460)
T cd03788 376 VAKEYVACQDDD-PGVLILSEFAGAAE----------------------------------------------------- 401 (460)
T ss_pred ccceeEEEecCC-CceEEEeccccchh-----------------------------------------------------
Confidence 999999999885 89999999999877
Q ss_pred CcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHh
Q psy775 933 AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMG 994 (1460)
Q Consensus 933 ~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 994 (1460)
.+.++++|||+|++++|++|.++|+|++++++.+++++++++.++++..|+++|+++|.
T Consensus 402 ---~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l~ 460 (460)
T cd03788 402 ---ELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDLA 460 (460)
T ss_pred ---hcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhhC
Confidence 12467999999999999999999999999999999999999999999999999998873
No 23
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.89 E-value=2e-21 Score=231.91 Aligned_cols=257 Identities=19% Similarity=0.267 Sum_probs=182.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|+||+.. .+...++++.| +.++.+.+|-.|.. + +++ .++.|-+.+. +.+.++...
T Consensus 99 ~~~vi~v~~~~--~~~~~~~~~~~----~~~~v~~~h~~~~~-~----------~~~---~~~~ii~~S~-~~~~~~~~~ 157 (380)
T PRK15484 99 KDSVIVIHNSM--KLYRQIRERAP----QAKLVMHMHNAFEP-E----------LLD---KNAKIIVPSQ-FLKKFYEER 157 (380)
T ss_pred CCcEEEEeCcH--HhHHHHHhhCC----CCCEEEEEecccCh-h----------Hhc---cCCEEEEcCH-HHHHHHHhh
Confidence 58999999843 33445666544 68899999976632 1 121 3566666654 333333310
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccc-hhhhc--cCCeEEEEecCccccCCHHHHHHHHHHHH
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA-PRVID--TKQKIVLGVDRLDYTKGLVHRLKAFETLL 367 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~-~~~~~--~~~kvIL~VgRLd~~KGI~~lL~Af~~lL 367 (1460)
....++.++|+|+|.+.|.+..... ..... .++++|+++||+.+.||+..+++|+.++.
T Consensus 158 ------------------~~~~~i~vIpngvd~~~~~~~~~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~ 219 (380)
T PRK15484 158 ------------------LPNADISIVPNGFCLETYQSNPQPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFEKLA 219 (380)
T ss_pred ------------------CCCCCEEEecCCCCHHHcCCcchHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHHHHH
Confidence 0112467899999998876432111 11111 46789999999999999999999999999
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCC
Q psy775 368 EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR 447 (1460)
Q Consensus 368 ~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlr 447 (1460)
+++|++ .|+++|.+......+..++++++.+++.+.+.+ +.+.|.++.+++..+|++||++|+||.+
T Consensus 220 ~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~---------v~~~G~~~~~~l~~~~~~aDv~v~pS~~ 286 (380)
T PRK15484 220 TAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDR---------CIMLGGQPPEKMHNYYPLADLVVVPSQV 286 (380)
T ss_pred HhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHhcCCc---------EEEeCCCCHHHHHHHHHhCCEEEeCCCC
Confidence 989875 477777654332223345666666666555432 3456999999999999999999999975
Q ss_pred -CCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cE-EECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Q psy775 448 -DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---AL-ICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522 (1460)
Q Consensus 448 -EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---al-lVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~ 522 (1460)
||||++++||||| |.|+|+|..+|..+.+.+ |+ +++|.|++++|++|.++++++.. +++..++......
T Consensus 287 ~E~f~~~~lEAma~-----G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~-~~~~~~ar~~~~~ 360 (380)
T PRK15484 287 EEAFCMVAVEAMAA-----GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL-TQIAEQAKDFVFS 360 (380)
T ss_pred ccccccHHHHHHHc-----CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHH
Confidence 9999999999999 677899998888877743 65 67899999999999999998764 4455444444555
Q ss_pred hcC
Q psy775 523 HMN 525 (1460)
Q Consensus 523 ~~~ 525 (1460)
+++
T Consensus 361 ~fs 363 (380)
T PRK15484 361 KYS 363 (380)
T ss_pred hCC
Confidence 566
No 24
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.88 E-value=9.7e-22 Score=232.62 Aligned_cols=284 Identities=20% Similarity=0.224 Sum_probs=187.3
Q ss_pred cCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccc
Q psy775 176 FCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDI 255 (1460)
Q Consensus 176 f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~ei 255 (1460)
+....+..|..+++.++..+.+ ....|+|++||++.+.++...+. .+.++.+++|.++..+.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~Dvv~~h~~~~~~~~~~~~~------~~~~~i~~~H~~~~~~~- 122 (372)
T cd03792 61 LSEEEKEIYLEWNEENAERPLL-----------DLDADVVVIHDPQPLALPLFKKK------RGRPWIWRCHIDLSSPN- 122 (372)
T ss_pred CCHHHHHHHHHHHHHHhccccc-----------cCCCCEEEECCCCchhHHHhhhc------CCCeEEEEeeeecCCCc-
Confidence 3455788899888888765211 12479999999998777665542 14678889999885422
Q ss_pred cccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhh-hh--cc
Q psy775 256 FRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQ-LA--QA 332 (1460)
Q Consensus 256 fr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~-~~--~~ 332 (1460)
+ ..+..+...+..+|.+.+.+.++++.+ +..+ ++ ++|+|||+..... .. ..
T Consensus 123 -~--~~~~~~~~~~~~~d~~i~~~~~~~~~~--------------------~~~~--~~-vipngvd~~~~~~~~~~~~~ 176 (372)
T cd03792 123 -R--RVWDFLQPYIEDYDAAVFHLPEYVPPQ--------------------VPPR--KV-IIPPSIDPLSGKNRELSPAD 176 (372)
T ss_pred -H--HHHHHHHHHHHhCCEEeecHHHhcCCC--------------------CCCc--eE-EeCCCCCCCccccCCCCHHH
Confidence 0 112233344445677666663332110 1112 23 8999999753211 10 01
Q ss_pred chhhhc-----cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHH
Q psy775 333 APRVID-----TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI 407 (1460)
Q Consensus 333 ~~~~~~-----~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~I 407 (1460)
....++ .++++|+++||+++.||+..+++||+.+.+++|++ .|+++|.+...+ +++.++.+++.+ +.
T Consensus 177 ~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~~-~~~~~~~~~~~~---~~ 248 (372)
T cd03792 177 IEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDP----QLVLVGSGATDD-PEGWIVYEEVLE---YA 248 (372)
T ss_pred HHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCCC-chhHHHHHHHHH---Hh
Confidence 111111 56789999999999999999999999998887875 477777553221 223333333222 11
Q ss_pred hcccCCCCcccEEEEcCC--CCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc--
Q psy775 408 NGRFTTPNWSPIRYIYGC--ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE-- 483 (1460)
Q Consensus 408 N~~fg~~~~~pIv~~~g~--v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~-- 483 (1460)
+.. ..+.++ +. ++.+++.++|++||+|++||.+||||++++||||| |.|+|+|..+|..+.+.+
T Consensus 249 ~~~------~~v~~~-~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~-----G~Pvv~s~~~~~~~~i~~~~ 316 (372)
T cd03792 249 EGD------PDIHVL-TLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK-----GKPVIAGPVGGIPLQIEDGE 316 (372)
T ss_pred CCC------CCeEEE-ecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc-----CCCEEEcCCCCchhhcccCC
Confidence 111 134554 44 49999999999999999999999999999999999 677899999998888843
Q ss_pred -cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 484 -ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 484 -allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|+++++ .+++|++|.+++++++..++++.++.+....+++
T Consensus 317 ~g~~~~~--~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s 357 (372)
T cd03792 317 TGFLVDT--VEEAAVRILYLLRDPELRRKMGANAREHVRENFL 357 (372)
T ss_pred ceEEeCC--cHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcC
Confidence 788864 6789999999998765544444444333445566
No 25
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.85 E-value=2.6e-19 Score=213.75 Aligned_cols=274 Identities=18% Similarity=0.165 Sum_probs=190.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccc---cCCC--cHHHH--hhhccCceeeeccHHhH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR---LFPW--SDEIL--QGMLGCDMVGFHIEDYC 283 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr---~LP~--r~eil--~gLL~aDlIgF~t~~ya 283 (1460)
..|+|-+|++.-.+++.++++.. +.++.+.+|.-++-...+. ..|. ...++ ..+-.+|.|.+.+...+
T Consensus 101 ~~Diih~h~~~~~~~~~~~~~~~-----~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~ 175 (405)
T TIGR03449 101 YYDLIHSHYWLSGQVGWLLRDRW-----GVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEA 175 (405)
T ss_pred CCCeEEechHHHHHHHHHHHHhc-----CCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHH
Confidence 47999999866655666665432 4678888886432111110 0111 11222 23446899999998887
Q ss_pred HHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh-c--cCCeEEEEecCccccCCHHHHH
Q psy775 284 LNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI-D--TKQKIVLGVDRLDYTKGLVHRL 360 (1460)
Q Consensus 284 r~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~-~--~~~kvIL~VgRLd~~KGI~~lL 360 (1460)
+.+... ++....++.++|+|+|.+.|.+......+.. . .++++|+++||+.+.||+..++
T Consensus 176 ~~~~~~-----------------~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~li 238 (405)
T TIGR03449 176 RDLVRH-----------------YDADPDRIDVVAPGADLERFRPGDRATERARLGLPLDTKVVAFVGRIQPLKAPDVLL 238 (405)
T ss_pred HHHHHH-----------------cCCChhhEEEECCCcCHHHcCCCcHHHHHHhcCCCCCCcEEEEecCCCcccCHHHHH
Confidence 776652 1122346788999999988864321111111 1 4578999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccE
Q psy775 361 KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAV 440 (1460)
Q Consensus 361 ~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV 440 (1460)
+|++++++++|+. ++.|+++|.+.....+..++++ +++.+.+ ....+.+.|.++.+++..+|+.||+
T Consensus 239 ~a~~~l~~~~~~~--~~~l~ivG~~~~~g~~~~~~l~----~~~~~~~-------l~~~v~~~g~~~~~~~~~~l~~ad~ 305 (405)
T TIGR03449 239 RAVAELLDRDPDR--NLRVIVVGGPSGSGLATPDALI----ELAAELG-------IADRVRFLPPRPPEELVHVYRAADV 305 (405)
T ss_pred HHHHHHHhhCCCc--ceEEEEEeCCCCCcchHHHHHH----HHHHHcC-------CCceEEECCCCCHHHHHHHHHhCCE
Confidence 9999999988873 4778888865422113333333 3333332 2234566799999999999999999
Q ss_pred EEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Q psy775 441 ALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 517 (1460)
Q Consensus 441 ~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l 517 (1460)
+++||..||||++++|||+| |.|+|+|..+|..+.+.+ |++++|.|+++++++|.+++++++...+++.++
T Consensus 306 ~v~ps~~E~~g~~~lEAma~-----G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~- 379 (405)
T TIGR03449 306 VAVPSYNESFGLVAMEAQAC-----GTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAA- 379 (405)
T ss_pred EEECCCCCCcChHHHHHHHc-----CCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHH-
Confidence 99999999999999999999 677899999888877743 899999999999999999998655444444333
Q ss_pred HHHHhhcC
Q psy775 518 RKREKHMN 525 (1460)
Q Consensus 518 ~~~v~~~~ 525 (1460)
++.+.+++
T Consensus 380 ~~~~~~fs 387 (405)
T TIGR03449 380 VEHAAGFS 387 (405)
T ss_pred HHHHHhCC
Confidence 44455555
No 26
>PLN02939 transferase, transferring glycosyl groups
Probab=99.84 E-value=1.2e-19 Score=230.41 Aligned_cols=261 Identities=11% Similarity=0.105 Sum_probs=180.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhcc-CCCceEEEEEec-----CCCCcccc-ccCCC---------------c-HHHHh
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQ-NLKFKLGFFLHI-----PFPPWDIF-RLFPW---------------S-DEILQ 267 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~-~~~~~IgfFlHi-----PFPs~eif-r~LP~---------------r-~eil~ 267 (1460)
..|+|-+||+|--++|.++.+..... ..++++.|.+|- -||...+- .-+|+ + ..+-.
T Consensus 610 ~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~ 689 (977)
T PLN02939 610 KPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKG 689 (977)
T ss_pred CCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHH
Confidence 46999999999999865554422111 135789999996 24422211 11221 1 11234
Q ss_pred hhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhcc---------------
Q psy775 268 GMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA--------------- 332 (1460)
Q Consensus 268 gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~--------------- 332 (1460)
|+..||.|-.-++.|++.-+. ..-.|++. .+..+..++.++|+|||++.|.+....
T Consensus 690 GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-------~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~ 760 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-------TLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKA 760 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHH--HhccchHH-------HhccccCCceEEecceehhhcCCccccccccccChhhhhhhh
Confidence 677789988888988887654 11001110 123456788899999999988764211
Q ss_pred --chhhhc----c----CCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHH
Q psy775 333 --APRVID----T----KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQ 402 (1460)
Q Consensus 333 --~~~~~~----~----~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~ 402 (1460)
...+++ . +.++|++|||+.+.||+..+++|+.++++ ++ +.|+++|.+. .+ .+++++..
T Consensus 761 ~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIvGdGp---~~---~~e~eL~~ 828 (977)
T PLN02939 761 ANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLLGSSP---VP---HIQREFEG 828 (977)
T ss_pred hhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEEeCCC---cH---HHHHHHHH
Confidence 011111 1 35899999999999999999999998875 23 3466666331 11 23455555
Q ss_pred HHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc
Q psy775 403 LVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH 482 (1460)
Q Consensus 403 lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~ 482 (1460)
++.+.+.. +.+.|.+..+......+|++||+||+||.+|||||+++|||+| |.|+|++..+|..+.+.
T Consensus 829 La~~l~l~-------drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAy-----GtPPVVs~vGGL~DtV~ 896 (977)
T PLN02939 829 IADQFQSN-------NNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRY-----GSVPIVRKTGGLNDSVF 896 (977)
T ss_pred HHHHcCCC-------CeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHC-----CCCEEEecCCCCcceee
Confidence 55554322 2244557888888889999999999999999999999999999 67889999999887662
Q ss_pred ------------ccEEECCCCHHHHHHHHHHHcC
Q psy775 483 ------------EALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 483 ------------~allVNP~D~~elA~AI~~aL~ 504 (1460)
.|++|+|.|+++++++|.+++.
T Consensus 897 d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 897 DFDDETIPVELRNGFTFLTPDEQGLNSALERAFN 930 (977)
T ss_pred cCCccccccCCCceEEecCCCHHHHHHHHHHHHH
Confidence 3899999999999999999876
No 27
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.84 E-value=1.7e-19 Score=221.11 Aligned_cols=273 Identities=18% Similarity=0.215 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccC-CCceEEEEEecCCCC----ccccccC--CC-
Q psy775 190 EFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQN-LKFKLGFFLHIPFPP----WDIFRLF--PW- 261 (1460)
Q Consensus 190 ~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~-~~~~IgfFlHiPFPs----~eifr~L--P~- 261 (1460)
.|+.++.+.+..+ ....|+|-+||+|--++|.++++.. ..+ .+.++.+..|-.-.. .+.+..+ |+
T Consensus 103 ~f~~~~~~~~~~~------~~~pDiiH~h~w~~~~~~~~l~~~~-~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~ 175 (466)
T PRK00654 103 FFSWAAAEFAEGL------DPRPDIVHAHDWHTGLIPALLKEKY-WRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAE 175 (466)
T ss_pred HHHHHHHHHHHhc------CCCCceEEECCcHHHHHHHHHHHhh-hccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChH
Confidence 4556665555422 1257999999999999999998653 112 257899999974211 0111111 10
Q ss_pred ------------cHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhh
Q psy775 262 ------------SDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQL 329 (1460)
Q Consensus 262 ------------r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~ 329 (1460)
...+-.++..||.|---++.+++...+. ..|.... . .++.+..++.++|+|||.+.|.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~---~~~~gl~--~---~~~~~~~ki~vI~NGid~~~~~p~ 247 (466)
T PRK00654 176 AFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTP---EFGYGLE--G---LLRARSGKLSGILNGIDYDIWNPE 247 (466)
T ss_pred HcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccc---cCCcChH--H---HHHhcccCceEecCCCCccccCCc
Confidence 0112223444555554454444332210 0000000 0 001234578999999999988653
Q ss_pred hcc-----------------chhhhc------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCC
Q psy775 330 AQA-----------------APRVID------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS 386 (1460)
Q Consensus 330 ~~~-----------------~~~~~~------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~ps 386 (1460)
... ...+++ .+.++|++|||+++.||++.+++|++++.++ + +.|+.+|.+
T Consensus 248 ~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g- 320 (466)
T PRK00654 248 TDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG- 320 (466)
T ss_pred cCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC-
Confidence 210 011111 2567999999999999999999999998764 2 346666632
Q ss_pred CCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCC
Q psy775 387 RTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPP 466 (1460)
Q Consensus 387 r~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~ 466 (1460)
+ + .+++++++++.+.+. .+.++.+. +.+.+..+|++||++|+||.+||||++.+|||+| |
T Consensus 321 --~-~---~~~~~l~~l~~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~-----G 380 (466)
T PRK00654 321 --D-P---ELEEAFRALAARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY-----G 380 (466)
T ss_pred --c-H---HHHHHHHHHHHHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC-----C
Confidence 1 1 234455555544432 24455454 6666778999999999999999999999999999 6
Q ss_pred CeEEEcCCCCchhccc---------ccEEECCCCHHHHHHHHHHHcC
Q psy775 467 GVLIVSPFAGAGEQMH---------EALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 467 GvlVlSe~aGaa~~L~---------~allVNP~D~~elA~AI~~aL~ 504 (1460)
.|+|+|..+|..+.+. .|++|+|.|+++++++|.++++
T Consensus 381 ~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 381 TLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALE 427 (466)
T ss_pred CCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHH
Confidence 7889999999988773 3899999999999999999886
No 28
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.84 E-value=5.9e-19 Score=210.75 Aligned_cols=278 Identities=19% Similarity=0.270 Sum_probs=193.3
Q ss_pred CCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHHH
Q psy775 567 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQ 646 (1460)
Q Consensus 567 ~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~ 646 (1460)
.++|++|+..-. ...++ +..+..++.+.+|-.|.. +. + -.+|.|-+.+. +.+.++..
T Consensus 100 ~~vi~v~~~~~~--~~~~~----~~~~~~~~v~~~h~~~~~-~~----------~---~~~~~ii~~S~-~~~~~~~~-- 156 (380)
T PRK15484 100 DSVIVIHNSMKL--YRQIR----ERAPQAKLVMHMHNAFEP-EL----------L---DKNAKIIVPSQ-FLKKFYEE-- 156 (380)
T ss_pred CcEEEEeCcHHh--HHHHH----hhCCCCCEEEEEecccCh-hH----------h---ccCCEEEEcCH-HHHHHHHh--
Confidence 379999995422 12233 455677888999976521 11 1 13455545443 33333321
Q ss_pred HHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHH
Q psy775 647 RRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERF 726 (1460)
Q Consensus 647 rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~ 726 (1460)
.+ ...++.++|+|||.+.|.+... +.+++.+++
T Consensus 157 -~~---------------~~~~i~vIpngvd~~~~~~~~~--------------------------~~~~~~~~~----- 189 (380)
T PRK15484 157 -RL---------------PNADISIVPNGFCLETYQSNPQ--------------------------PNLRQQLNI----- 189 (380)
T ss_pred -hC---------------CCCCEEEecCCCCHHHcCCcch--------------------------HHHHHHhCC-----
Confidence 11 1124678999999877753110 122333332
Q ss_pred HHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q psy775 727 VQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR 806 (1460)
Q Consensus 727 ~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~ 806 (1460)
..++++|+++||+.+.||+..+++|+.++.+++|++ .|+.+|.+......+...+.+++.+++.+
T Consensus 190 -----------~~~~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~ 254 (380)
T PRK15484 190 -----------SPDETVLLYAGRISPDKGILLLMQAFEKLATAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKR 254 (380)
T ss_pred -----------CCCCeEEEEeccCccccCHHHHHHHHHHHHHhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHh
Confidence 246789999999999999999999999999999974 68888876543322334566777777766
Q ss_pred HhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCC-ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhh
Q psy775 807 INGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEAL 885 (1460)
Q Consensus 807 IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSl-rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l 885 (1460)
++.. +.+.|.++.+++..+|+.||++++||. .|||+++.+||||| +.|+|+|..+|..+.+
T Consensus 255 l~~~---------v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~-----G~PVI~s~~gg~~Eiv---- 316 (380)
T PRK15484 255 IGDR---------CIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAA-----GKPVLASTKGGITEFV---- 316 (380)
T ss_pred cCCc---------EEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHc-----CCCEEEeCCCCcHhhc----
Confidence 5433 567889999999999999999999997 49999999999999 7899999998877611
Q ss_pred hcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHH
Q psy775 886 ICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDE 965 (1460)
Q Consensus 886 ~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~e 965 (1460)
.++.+ |-++++|.|++++|++|.++++++..
T Consensus 317 -----------------------------------------~~~~~-------G~~l~~~~d~~~la~~I~~ll~d~~~- 347 (380)
T PRK15484 317 -----------------------------------------LEGIT-------GYHLAEPMTSDSIISDINRTLADPEL- 347 (380)
T ss_pred -----------------------------------------ccCCc-------eEEEeCCCCHHHHHHHHHHHHcCHHH-
Confidence 11111 22467899999999999999998764
Q ss_pred HHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 966 RTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 966 r~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
++...++......++++..-++++.+.+.+.
T Consensus 348 ~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 348 TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 4454444444567889999999888887653
No 29
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.84 E-value=3.8e-19 Score=228.84 Aligned_cols=286 Identities=16% Similarity=0.132 Sum_probs=189.8
Q ss_pred CCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccc-----------------cCCCcHHH-HhhhccCc
Q psy775 212 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR-----------------LFPWSDEI-LQGMLGCD 273 (1460)
Q Consensus 212 gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr-----------------~LP~r~ei-l~gLL~aD 273 (1460)
.|+|--|+..--.+...|++.+ +++..+..|.- ..+-++ .++.|-+. -..+-.||
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-----gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad 383 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-----NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASE 383 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-----CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcC
Confidence 6999999888888888888764 57888888852 011111 11222111 12345688
Q ss_pred eeeeccHHhHHHHHHHH-------HhhcCceecCCCcEEEECCe-EEEEEEeecccCchhhhhhhccc------------
Q psy775 274 MVGFHIEDYCLNFVDCC-------QRRLGCRVDRKNLLVEHGGR-TVRIRPLPIAIPYERFVQLAQAA------------ 333 (1460)
Q Consensus 274 lIgF~t~~yar~FL~~~-------~riLg~~~~~~~~~i~~~Gr-~vkV~viPiGID~~~f~~~~~~~------------ 333 (1460)
.|--.|......-...- .|+|.....+ .+..+|+ ..++.|+|+|||++.|.+.....
T Consensus 384 ~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~ 460 (1050)
T TIGR02468 384 IVITSTRQEIEEQWGLYDGFDVILERKLRARARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPA 460 (1050)
T ss_pred EEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccc
Confidence 88877776655332210 0111111100 1222332 33899999999999997642110
Q ss_pred -------hhhhc----cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHH----HHHHH
Q psy775 334 -------PRVID----TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEY----QDLKE 398 (1460)
Q Consensus 334 -------~~~~~----~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey----~~L~~ 398 (1460)
..+.+ +++++|++|||+++.||+..+|+||..+.+..+.. ++.+ ++|... +.++. .....
T Consensus 461 ~~~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~ 535 (1050)
T TIGR02468 461 KPDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLT 535 (1050)
T ss_pred cccchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHH
Confidence 01111 66789999999999999999999999987543321 2433 334221 11111 12334
Q ss_pred HHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc----cEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC
Q psy775 399 EMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA----AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474 (1460)
Q Consensus 399 ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aA----DV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~ 474 (1460)
++..++.+.+. ...+.|.|.+++++++++|+.| |+||+||++||||++++||||| |.|+|+|..
T Consensus 536 ~L~~li~~lgL-------~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAc-----GlPVVASdv 603 (1050)
T TIGR02468 536 SVLKLIDKYDL-------YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPMVATKN 603 (1050)
T ss_pred HHHHHHHHhCC-------CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHh-----CCCEEEeCC
Confidence 45555544432 2345667999999999999998 6999999999999999999999 677899999
Q ss_pred CCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 475 AGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 475 aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
+|..+.+. .|++|+|.|++++|++|.++|+++...++++.++. +.+.+++
T Consensus 604 GG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~~gr-~~v~~FS 656 (1050)
T TIGR02468 604 GGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGL-KNIHLFS 656 (1050)
T ss_pred CCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHHHHH-HHHHHCC
Confidence 88888774 39999999999999999999997766666655554 4456666
No 30
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.84 E-value=1.3e-19 Score=220.27 Aligned_cols=200 Identities=15% Similarity=0.229 Sum_probs=139.8
Q ss_pred EEEEEEeecccCchhhhhhhccc--hhh----hc----cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEE
Q psy775 311 TVRIRPLPIAIPYERFVQLAQAA--PRV----ID----TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLL 380 (1460)
Q Consensus 311 ~vkV~viPiGID~~~f~~~~~~~--~~~----~~----~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLv 380 (1460)
..++.++|+|||++.|.+..... ... .+ .++++|++|||+++.||+..+|+||.++.+..+. .++++
T Consensus 208 ~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~--~~l~l- 284 (439)
T TIGR02472 208 PERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEM--ANLVL- 284 (439)
T ss_pred ccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhh--ccEEE-
Confidence 45788999999999986542211 111 11 4577999999999999999999999864221111 12333
Q ss_pred EEEcC-CCCChHH-HHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhc----cEEEEccCCCCCCcce
Q psy775 381 QIAVP-SRTDVKE-YQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDA----AVALVTPLRDGMNLVA 454 (1460)
Q Consensus 381 qig~p-sr~~~~e-y~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aA----DV~VvpSlrEGfnLVa 454 (1460)
.+|.+ .+...+. ..++.+++..++.+++ ....+.|.|.++.+++..+|++| |+||+||.+||||+++
T Consensus 285 i~G~g~~~~~l~~~~~~~~~~~~~~~~~~~-------l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~ 357 (439)
T TIGR02472 285 VLGCRDDIRKMESQQREVLQKVLLLIDRYD-------LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTL 357 (439)
T ss_pred EeCCccccccccHHHHHHHHHHHHHHHHcC-------CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHH
Confidence 23321 1111111 1122333444444432 23345677999999999999988 9999999999999999
Q ss_pred eeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 455 KEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 455 lEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
+||||| |.|+|+|..+|..+.+.+ |++|+|.|++++|++|.++++++...+++..++......+++
T Consensus 358 lEAma~-----G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs 426 (439)
T TIGR02472 358 LEAAAC-----GLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGIEGVRRHYS 426 (439)
T ss_pred HHHHHh-----CCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCC
Confidence 999999 677899999998887753 899999999999999999999766555555445444445555
No 31
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.83 E-value=1.9e-19 Score=220.64 Aligned_cols=272 Identities=19% Similarity=0.204 Sum_probs=179.3
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCC----ccccccCCCc---
Q psy775 190 EFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPP----WDIFRLFPWS--- 262 (1460)
Q Consensus 190 ~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs----~eifr~LP~r--- 262 (1460)
.|+.++.+.++.. ....|+|.+||+|-.++|.++++... ..+.++.+..|-..+. .+.+..+...
T Consensus 113 ~f~~a~~~~~~~~------~~~~DiiH~hdw~~~~~~~~l~~~~~--~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~ 184 (473)
T TIGR02095 113 FFSRAAAELLSGL------GWQPDVVHAHDWHTALVPALLKAVYR--PNPIKTVFTIHNLAYQGVFPADDFSELGLPPEY 184 (473)
T ss_pred HHHHHHHHHHHhc------CCCCCEEEECCcHHHHHHHHHHhhcc--CCCCCEEEEcCCCccCCcCCHHHHHHcCCChHH
Confidence 3555555554421 12479999999999999999987532 0137899999975421 1222211111
Q ss_pred ------------HHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhh
Q psy775 263 ------------DEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLA 330 (1460)
Q Consensus 263 ------------~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~ 330 (1460)
..+-.++..||.|-.-++.|++...+. ..|.... . .+..+..++.++|+|||.+.|.+..
T Consensus 185 ~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~~l~--~---~l~~~~~ki~~I~NGid~~~~~p~~ 256 (473)
T TIGR02095 185 FHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGYGLD--G---VLKARSGKLRGILNGIDTEVWNPAT 256 (473)
T ss_pred cCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCccch--h---HHHhcCCCeEEEeCCCCccccCCCC
Confidence 012224445555555555554433321 0000000 0 0011345788999999999886431
Q ss_pred cc-----------------chhhhc-------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCC
Q psy775 331 QA-----------------APRVID-------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS 386 (1460)
Q Consensus 331 ~~-----------------~~~~~~-------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~ps 386 (1460)
.. ...+++ .++++|+++||+.+.||++.+++|++++.++. +.|+.+|.+.
T Consensus 257 ~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g~ 330 (473)
T TIGR02095 257 DPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTGD 330 (473)
T ss_pred CcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCCC
Confidence 10 011111 26789999999999999999999999987642 4466666332
Q ss_pred CCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCC
Q psy775 387 RTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPP 466 (1460)
Q Consensus 387 r~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~ 466 (1460)
+ ++++++++++.+.+.+ +.+ .+..+.+++..+|++||++++||.+||||++++|||+| +
T Consensus 331 ----~---~~~~~l~~~~~~~~~~--------v~~-~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~-----G 389 (473)
T TIGR02095 331 ----P---ELEEALRELAERYPGN--------VRV-IIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY-----G 389 (473)
T ss_pred ----H---HHHHHHHHHHHHCCCc--------EEE-EEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC-----C
Confidence 2 2345555555443221 333 35678888889999999999999999999999999999 6
Q ss_pred CeEEEcCCCCchhccc---------ccEEECCCCHHHHHHHHHHHcC
Q psy775 467 GVLIVSPFAGAGEQMH---------EALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 467 GvlVlSe~aGaa~~L~---------~allVNP~D~~elA~AI~~aL~ 504 (1460)
.|+|+|..+|..+.+. .|++++|.|+++++++|.+++.
T Consensus 390 ~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 390 TVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALR 436 (473)
T ss_pred CCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHH
Confidence 7889999999998883 3899999999999999999987
No 32
>PLN02316 synthase/transferase
Probab=99.83 E-value=4e-19 Score=229.28 Aligned_cols=252 Identities=13% Similarity=0.109 Sum_probs=180.1
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhcc-CCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQ-NLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~-~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~ 289 (1460)
..|+|-+||+|-.++|.++++..... -.+.++.+.+|-.- | .+..+-.++..||.|---++.|++..+..
T Consensus 709 ~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~----~~n~lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 709 HPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----F----GANHIGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred CCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----c----chhHHHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 46999999999999999998753211 12578999999421 1 12335567778999998888887765541
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhcc-----------------ch-hhhc------cCCeEEE
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA-----------------AP-RVID------TKQKIVL 345 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~-----------------~~-~~~~------~~~kvIL 345 (1460)
+ ....+.-++.++|+|||++.|.+.... .. .+++ .+.++|+
T Consensus 780 -----~----------~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg 844 (1036)
T PLN02316 780 -----S----------AIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVG 844 (1036)
T ss_pred -----c----------CcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEE
Confidence 0 011234578899999999877543110 01 1111 2568999
Q ss_pred EecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC
Q psy775 346 GVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC 425 (1460)
Q Consensus 346 ~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~ 425 (1460)
+||||.+.||+..+++|+.++++. + +.|+++|.+. + ..+++++.+++.+++..+. .-+.|.+.
T Consensus 845 ~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~Gp--d----~~~e~~l~~La~~Lg~~~~-----~rV~f~g~ 907 (1036)
T PLN02316 845 IITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGSAP--D----PRIQNDFVNLANQLHSSHH-----DRARLCLT 907 (1036)
T ss_pred EEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeCCC--C----HHHHHHHHHHHHHhCccCC-----CeEEEEec
Confidence 999999999999999999999863 2 3455555331 1 1345566666666654321 12333455
Q ss_pred CCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc----------------ccEEECC
Q psy775 426 ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH----------------EALICNP 489 (1460)
Q Consensus 426 v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~----------------~allVNP 489 (1460)
.+......+|++||+||+||.+|||||+.+|||+| |.|+|+|..+|..+.+. .|++|+|
T Consensus 908 ~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~-----GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~ 982 (1036)
T PLN02316 908 YDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY-----GSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDG 982 (1036)
T ss_pred CCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc-----CCCeEEEcCCCcHhhccccccccccccccccCCceEEeCC
Confidence 55544457999999999999999999999999999 66789999999998872 3899999
Q ss_pred CCHHHHHHHHHHHcCCCHH
Q psy775 490 YEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 490 ~D~~elA~AI~~aL~m~~~ 508 (1460)
.|++++++||.++|.....
T Consensus 983 ~d~~aLa~AL~raL~~~~~ 1001 (1036)
T PLN02316 983 ADAAGVDYALNRAISAWYD 1001 (1036)
T ss_pred CCHHHHHHHHHHHHhhhhh
Confidence 9999999999999986533
No 33
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.83 E-value=3.7e-19 Score=212.76 Aligned_cols=272 Identities=18% Similarity=0.182 Sum_probs=178.6
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCC--ccc-cc-cCCCc--------HH---HHhhhccCcee
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPP--WDI-FR-LFPWS--------DE---ILQGMLGCDMV 275 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs--~ei-fr-~LP~r--------~e---il~gLL~aDlI 275 (1460)
..|+|..| +.+....++++.+| ++++..++|..+-. .+. |. ..+.+ .. ....+-.||.+
T Consensus 87 ~pdvi~~h--~~~~~~~~l~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 160 (396)
T cd03818 87 RPDVIVAH--PGWGETLFLKDVWP----DAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAG 160 (396)
T ss_pred CCCEEEEC--CccchhhhHHHhCC----CCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEE
Confidence 46999999 55666677887766 67777776643311 110 11 11111 11 12344556665
Q ss_pred eeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh-----ccCCeEEEEecC-
Q psy775 276 GFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI-----DTKQKIVLGVDR- 349 (1460)
Q Consensus 276 gF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~-----~~~~kvIL~VgR- 349 (1460)
-..+......|.+ .+ ..++.++|+|||.+.|.+......... ..++++|+++||
T Consensus 161 i~~s~~~~~~~~~-----------------~~---~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 161 VSPTRWQRSTFPA-----------------EL---RSRISVIHDGIDTDRLRPDPQARLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred ECCCHHHHhhCcH-----------------hh---ccceEEeCCCccccccCCCchhhhcccccccCCCCCeEEEEECCC
Confidence 5555433322211 01 146889999999998875432211111 146788999998
Q ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCC--CChHH-HHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCC
Q psy775 350 LDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSR--TDVKE-YQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCI 426 (1460)
Q Consensus 350 Ld~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr--~~~~e-y~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v 426 (1460)
+.+.||+..+++|+.++.+++|+++ |+.+|.... +..+. ..+++++ +..+++.+.+ . +.+.|.|.+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~---~-~~V~f~G~v 289 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQH---MLDELGGRLD---L-SRVHFLGRV 289 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHH---HHHHhhcccC---c-ceEEEeCCC
Confidence 9999999999999999998888764 666664321 11000 0112222 1222222211 1 234566999
Q ss_pred CHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHc
Q psy775 427 SQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRAL 503 (1460)
Q Consensus 427 ~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL 503 (1460)
+++++.++|+.||++++||..||+|++++||||| |.|+|+|..+|..+.+.+ |++++|.|++++|++|.+++
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~-----G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll 364 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC-----GCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELL 364 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC-----CCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 677899999888888753 89999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhh-cC
Q psy775 504 TMPEDERTLRMNYLRKREKH-MN 525 (1460)
Q Consensus 504 ~m~~~er~~R~~~l~~~v~~-~~ 525 (1460)
+++...++++.++ ++.+.+ ++
T Consensus 365 ~~~~~~~~l~~~a-r~~~~~~fs 386 (396)
T cd03818 365 DDPARRARLRRAA-RRTALRYDL 386 (396)
T ss_pred hCHHHHHHHHHHH-HHHHHHhcc
Confidence 9876555555444 444444 44
No 34
>PRK14098 glycogen synthase; Provisional
Probab=99.83 E-value=1.6e-19 Score=222.49 Aligned_cols=281 Identities=11% Similarity=0.125 Sum_probs=185.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhcc--CCCceEEEEEecCC-----CC
Q psy775 180 HWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQ--NLKFKLGFFLHIPF-----PP 252 (1460)
Q Consensus 180 ~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~--~~~~~IgfFlHiPF-----Ps 252 (1460)
..+.|.-++++.++.+.+. . -..|+|-+||+|--++|.+++++.... ..++++.+..|... |.
T Consensus 120 ~~~rf~~f~~a~l~~~~~~-~---------~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~ 189 (489)
T PRK14098 120 SAEKVIFFNVGVLETLQRL-G---------WKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPF 189 (489)
T ss_pred HHHHHHHHHHHHHHHHHhc-C---------CCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCH
Confidence 3456665566665554321 0 136999999999999999998754211 12689999999732 21
Q ss_pred ccccccCCCc------------HHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecc
Q psy775 253 WDIFRLFPWS------------DEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIA 320 (1460)
Q Consensus 253 ~eifr~LP~r------------~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiG 320 (1460)
...-..+|+. .-+-.++..||.|---++.|++.-.+....-.|++. ....+..++.++|+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~-------~l~~~~~kl~~I~NG 262 (489)
T PRK14098 190 KVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK-------VLEERKMRLHGILNG 262 (489)
T ss_pred HHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH-------HHHhcCCCeeEEeCC
Confidence 1111113311 122335556666666666665543220000001100 001135678899999
Q ss_pred cCchhhhhhhccc----------------h-hhhc-------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCc
Q psy775 321 IPYERFVQLAQAA----------------P-RVID-------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEK 376 (1460)
Q Consensus 321 ID~~~f~~~~~~~----------------~-~~~~-------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~k 376 (1460)
||++.|.+..... + .+.+ .+.++|++|||+.+.||+..+++|+.++.+. +
T Consensus 263 ID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~---- 336 (489)
T PRK14098 263 IDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D---- 336 (489)
T ss_pred ccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----
Confidence 9999886532110 0 1111 3567999999999999999999999998752 2
Q ss_pred EEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceee
Q psy775 377 VTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKE 456 (1460)
Q Consensus 377 vvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValE 456 (1460)
+.|+++|.+ +. .+++++++++.+...+ +.+.+.++.+++..+|++||+||+||.+||||++.+|
T Consensus 337 ~~lvivG~G---~~----~~~~~l~~l~~~~~~~---------V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lE 400 (489)
T PRK14098 337 IQLVICGSG---DK----EYEKRFQDFAEEHPEQ---------VSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMF 400 (489)
T ss_pred cEEEEEeCC---CH----HHHHHHHHHHHHCCCC---------EEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHH
Confidence 457766632 11 2344555555443221 3455788999999999999999999999999999999
Q ss_pred eeeeccCCCCCeEEEcCCCCchhccc-------ccEEECCCCHHHHHHHHHHHcC
Q psy775 457 FVACQINEPPGVLIVSPFAGAGEQMH-------EALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 457 amAcq~~~~~GvlVlSe~aGaa~~L~-------~allVNP~D~~elA~AI~~aL~ 504 (1460)
||+| |.|+|++..+|..+.+. .|++++|.|+++++++|.+++.
T Consensus 401 Ama~-----G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~ 450 (489)
T PRK14098 401 AMSY-----GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALA 450 (489)
T ss_pred HHhC-----CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHH
Confidence 9999 66789999999887763 3899999999999999999864
No 35
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.83 E-value=6.1e-18 Score=199.26 Aligned_cols=274 Identities=22% Similarity=0.239 Sum_probs=188.6
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCC------c-HHHHhhhccCceeeeccHHhH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPW------S-DEILQGMLGCDMVGFHIEDYC 283 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~------r-~eil~gLL~aDlIgF~t~~ya 283 (1460)
..|+|-+|++....++..+.+.. +.++.+..|.............+ + ..-...+..+|.+.+.+....
T Consensus 101 ~~Div~~~~~~~~~~~~~~~~~~-----~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~ 175 (398)
T cd03800 101 RPDLIHAHYWDSGLVALLLARRL-----GIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEA 175 (398)
T ss_pred CccEEEEecCccchHHHHHHhhc-----CCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHH
Confidence 46999999888777776665432 57788888865432111100001 0 111223446898888888766
Q ss_pred HHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch--hhh--ccCCeEEEEecCccccCCHHHH
Q psy775 284 LNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP--RVI--DTKQKIVLGVDRLDYTKGLVHR 359 (1460)
Q Consensus 284 r~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~--~~~--~~~~kvIL~VgRLd~~KGI~~l 359 (1460)
..+.+. +.....++.++|+|+|.+.|.+...... ... ..++++|+++||+++.||+..+
T Consensus 176 ~~~~~~-----------------~~~~~~~~~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 176 EELYSL-----------------YGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred HHHHHH-----------------ccccccccEEECCCCCccceecccchhhHHHhhccCCCCcEEEEEcccccccCHHHH
Confidence 655541 1112234788999999887754322111 111 1567899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q psy775 360 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAA 439 (1460)
Q Consensus 360 L~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aAD 439 (1460)
++|+.++.+++|++ .++.+|.......+. ...+++.++.+.+. .+-+.+.|.++.+++..+|+.||
T Consensus 239 l~a~~~l~~~~~~~----~l~i~G~~~~~~~~~---~~~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 239 IRAYAELPELRERA----NLVIVGGPRDDILAM---DEEELRELARELGV-------IDRVDFPGRVSREDLPALYRAAD 304 (398)
T ss_pred HHHHHHHHHhCCCe----EEEEEECCCCcchhh---hhHHHHHHHHhcCC-------CceEEEeccCCHHHHHHHHHhCC
Confidence 99999998887764 477777544332222 22234444443322 23355679999999999999999
Q ss_pred EEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Q psy775 440 VALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNY 516 (1460)
Q Consensus 440 V~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~ 516 (1460)
++++||..||||++++||||| |.|+|+|+.+|..+.+.. |++++|.|+++++++|.++++++...+++..++
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~-----G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a 379 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMAC-----GLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAG 379 (398)
T ss_pred EEEecccccccCcHHHHHHhc-----CCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 999999999999999999999 667799999998887743 899999999999999999998765555555444
Q ss_pred HHHHHhhcC
Q psy775 517 LRKREKHMN 525 (1460)
Q Consensus 517 l~~~v~~~~ 525 (1460)
.....++++
T Consensus 380 ~~~~~~~~s 388 (398)
T cd03800 380 LRRARARYT 388 (398)
T ss_pred HHHHHHhCC
Confidence 443335555
No 36
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.82 E-value=1e-18 Score=209.20 Aligned_cols=262 Identities=16% Similarity=0.197 Sum_probs=176.8
Q ss_pred CCCEEEEeCcchhHH-HHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHh-hhccCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLA-ANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQ-GMLGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~ll-P~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~-gLL~aDlIgF~t~~yar~FL~ 288 (1460)
..|+|-+|+++-.+. ...+-.+ ..+.++.+..|-.|+..+.... +...+.+ .+-.+|.+-+.+....+.+..
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~----~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 161 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHAR----TMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVL 161 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhh----hcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHH
Confidence 479999999764433 2333222 1257889999976653221110 1111212 233567777776655544322
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLE 368 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~ 368 (1460)
. .+....++.++|+|+|.+.|.+.... ...++++++++||+.+.||+..+++|+..+.+
T Consensus 162 ~-----------------~~~~~~k~~vi~ngvd~~~f~~~~~~----~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~ 220 (398)
T cd03796 162 R-----------------ASLDPERVSVIPNAVDSSDFTPDPSK----RDNDKITIVVISRLVYRKGIDLLVGIIPEICK 220 (398)
T ss_pred H-----------------hCCChhhEEEEcCccCHHHcCCCccc----CCCCceEEEEEeccchhcCHHHHHHHHHHHHh
Confidence 1 11123567889999999888643211 12467899999999999999999999999988
Q ss_pred hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCC
Q psy775 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD 448 (1460)
Q Consensus 369 ~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrE 448 (1460)
++|++ .|+.+|. ++..+.+++. +.+.+ ....+.+.|.++.+++..+|+.||++++||..|
T Consensus 221 ~~~~~----~l~i~G~-----g~~~~~l~~~----~~~~~-------l~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E 280 (398)
T cd03796 221 KHPNV----RFIIGGD-----GPKRILLEEM----REKYN-------LQDRVELLGAVPHERVRDVLVQGHIFLNTSLTE 280 (398)
T ss_pred hCCCE----EEEEEeC-----CchHHHHHHH----HHHhC-------CCCeEEEeCCCCHHHHHHHHHhCCEEEeCChhh
Confidence 88875 4666663 2333334433 33322 123345569999999999999999999999999
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|||++.+||||| |.|+|+|..+|..+.+.+ +++++| |.++++++|.++++++.+.+....+...+...+++
T Consensus 281 ~~g~~~~EAma~-----G~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~fs 353 (398)
T cd03796 281 AFCIAIVEAASC-----GLLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISILRTGKHDPWSFHNRVKKMYS 353 (398)
T ss_pred ccCHHHHHHHHc-----CCCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhChhhhhhHHHHHHHHHHhhCC
Confidence 999999999999 677899999988887744 455555 99999999999999766554444444444444455
No 37
>PRK14099 glycogen synthase; Provisional
Probab=99.82 E-value=9.6e-19 Score=215.43 Aligned_cols=265 Identities=20% Similarity=0.222 Sum_probs=166.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecC-----CCCcccccc--CCCc-------------HHHHhhhc
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP-----FPPWDIFRL--FPWS-------------DEILQGML 270 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiP-----FPs~eifr~--LP~r-------------~eil~gLL 270 (1460)
..|+|-+||+|--++|.+|+.+. ..+.++.+..|-- ||. ..+.. +|.. ..+-.++.
T Consensus 133 ~pDIiH~Hdw~~~l~~~~l~~~~---~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 133 VPDIVHAHDWQAGLAPAYLHYSG---RPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCCEEEECCcHHHHHHHHHHhCC---CCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 46999999999999999997421 2357899999953 221 11111 1110 01222333
Q ss_pred cCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccc-----------------
Q psy775 271 GCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA----------------- 333 (1460)
Q Consensus 271 ~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~----------------- 333 (1460)
.||.|---++.|++...+.- .-.|.+. .+..+..++.++|+|||++.|.+.....
T Consensus 209 ~ad~vitVS~~~a~ei~~~~-~g~gl~~-------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k 280 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPE-AGMGLDG-------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANK 280 (485)
T ss_pred hcCeeeecChhHHHHHhccc-CCcChHH-------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhH
Confidence 34444433443333222100 0000000 0011345789999999999886532210
Q ss_pred hhhhc-------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHH
Q psy775 334 PRVID-------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR 406 (1460)
Q Consensus 334 ~~~~~-------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~ 406 (1460)
..+++ .+.+++++|||+++.||+..+++|+.+++++ + +.|+++|.+ + + ++++++++++.+
T Consensus 281 ~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~G---~-~---~~~~~l~~l~~~ 347 (485)
T PRK14099 281 AALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGSG---D-A---ELEARFRAAAQA 347 (485)
T ss_pred HHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEecC---C-H---HHHHHHHHHHHH
Confidence 11111 2356888999999999999999999998753 2 346666632 1 1 234445555443
Q ss_pred HhcccCCCCcccEEEEcCCCCHHHHHHHH-HhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---
Q psy775 407 INGRFTTPNWSPIRYIYGCISQDELASFY-RDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH--- 482 (1460)
Q Consensus 407 IN~~fg~~~~~pIv~~~g~v~~eeL~aLY-~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~--- 482 (1460)
... .++++.|. ++++..+| ++||+||+||.+||||++.+|||+| |+++|+|..+|..+.+.
T Consensus 348 ~~~--------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~-----G~ppVvs~~GGl~d~V~~~~ 412 (485)
T PRK14099 348 YPG--------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRY-----GAVPVVARVGGLADTVVDAN 412 (485)
T ss_pred CCC--------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHC-----CCCcEEeCCCCccceeeccc
Confidence 221 24455675 67888877 5699999999999999999999999 56778999999888662
Q ss_pred ---------ccEEECCCCHHHHHHHHHHH---cCCCHHHHHHHHH
Q psy775 483 ---------EALICNPYEIDAAAEVIHRA---LTMPEDERTLRMN 515 (1460)
Q Consensus 483 ---------~allVNP~D~~elA~AI~~a---L~m~~~er~~R~~ 515 (1460)
.|++|+|.|+++++++|.++ ++++...++++.+
T Consensus 413 ~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~ 457 (485)
T PRK14099 413 EMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRN 457 (485)
T ss_pred ccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 38999999999999999984 4444433333333
No 38
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.82 E-value=6.6e-19 Score=208.56 Aligned_cols=284 Identities=20% Similarity=0.205 Sum_probs=182.1
Q ss_pred CCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHHH
Q psy775 567 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQ 646 (1460)
Q Consensus 567 ~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~ 646 (1460)
.|+|++|+++...++...+ ....++.++.|.++..+. . ...+.+.+.+..+|.+.+.+.++++.+
T Consensus 86 ~Dvv~~h~~~~~~~~~~~~------~~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~~~d~~i~~~~~~~~~~----- 150 (372)
T cd03792 86 ADVVVIHDPQPLALPLFKK------KRGRPWIWRCHIDLSSPN--R--RVWDFLQPYIEDYDAAVFHLPEYVPPQ----- 150 (372)
T ss_pred CCEEEECCCCchhHHHhhh------cCCCeEEEEeeeecCCCc--H--HHHHHHHHHHHhCCEEeecHHHhcCCC-----
Confidence 3899999999665544332 225678889998764321 0 111223334445777766653332110
Q ss_pred HHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHH
Q psy775 647 RRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERF 726 (1460)
Q Consensus 647 rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~ 726 (1460)
+..+ ++ ++|+|||+...... ... .+..+.+|+.++++
T Consensus 151 ---------------~~~~--~~-vipngvd~~~~~~~--~~~-------------------~~~~~~~~~~~~~~---- 187 (372)
T cd03792 151 ---------------VPPR--KV-IIPPSIDPLSGKNR--ELS-------------------PADIEYILEKYGID---- 187 (372)
T ss_pred ---------------CCCc--eE-EeCCCCCCCccccC--CCC-------------------HHHHHHHHHHhCCC----
Confidence 1122 23 89999997532110 000 01113445444432
Q ss_pred HHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q psy775 727 VQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR 806 (1460)
Q Consensus 727 ~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~ 806 (1460)
.++++|+++||+++.||+..+++||+.+.+++|++ .|+.+|.+...+ +++.++.++ +.++
T Consensus 188 ------------~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~~-~~~~~~~~~---~~~~ 247 (372)
T cd03792 188 ------------PERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDP----QLVLVGSGATDD-PEGWIVYEE---VLEY 247 (372)
T ss_pred ------------CCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCCC-chhHHHHHH---HHHH
Confidence 57889999999999999999999999998887874 677778664322 222232222 2222
Q ss_pred HhccCCCCCCccEEEEcCC-CCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhh
Q psy775 807 INGRFTTPNWSPIRYIYGC-ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEAL 885 (1460)
Q Consensus 807 IN~~~~~~~~~pvv~~~g~-v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l 885 (1460)
.+.. ..++++... ++.+++.++|++||+++.||.+||||++++||||| +.|+|+|..+|..+.+
T Consensus 248 ~~~~------~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~-----G~Pvv~s~~~~~~~~i---- 312 (372)
T cd03792 248 AEGD------PDIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK-----GKPVIAGPVGGIPLQI---- 312 (372)
T ss_pred hCCC------CCeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc-----CCCEEEcCCCCchhhc----
Confidence 2211 124444332 48999999999999999999999999999999999 7899999988876611
Q ss_pred hcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHH
Q psy775 886 ICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDE 965 (1460)
Q Consensus 886 ~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~e 965 (1460)
.++ ..+++++ +.+++|++|.+++++++..
T Consensus 313 -----------------------------------------~~~--------~~g~~~~--~~~~~a~~i~~ll~~~~~~ 341 (372)
T cd03792 313 -----------------------------------------EDG--------ETGFLVD--TVEEAAVRILYLLRDPELR 341 (372)
T ss_pred -----------------------------------------ccC--------CceEEeC--CcHHHHHHHHHHHcCHHHH
Confidence 111 2346776 4678899999999875544
Q ss_pred HHHHHHHHHhHH-HhcCHHHHHHHHHHHHhh
Q psy775 966 RTLRMNYLRKRE-KVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 966 r~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 995 (1460)
++++.+ .++++ .+++++..++++++.+++
T Consensus 342 ~~~~~~-a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 342 RKMGAN-AREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHH-HHHHHHHHcCHHHHHHHHHHHHHh
Confidence 444444 35554 678999999988877654
No 39
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.82 E-value=1.5e-18 Score=209.32 Aligned_cols=261 Identities=16% Similarity=0.161 Sum_probs=178.6
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCcccccc--CC-CcHHHHhhhccCceeeeccHHhHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL--FP-WSDEILQGMLGCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~--LP-~r~eil~gLL~aDlIgF~t~~yar~FL 287 (1460)
+-|+|-.|..+.-.+..++++. + ..+.++.+.+|-+ +++.. .. .+..+-+-+-.||.|-..+....+.+.
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~-~--~~~~~~~~t~Hg~----d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~ 190 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLREL-G--VLRGKIATIFHGI----DISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQ 190 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHh-C--CCCCCeEEEEccc----ccccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHHH
Confidence 5799999987776677777652 1 1234567788843 22211 11 112233333457877766654433332
Q ss_pred HHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHH
Q psy775 288 DCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLL 367 (1460)
Q Consensus 288 ~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL 367 (1460)
+ +| ....++.++|+|||.+.|.+.... ...+...|++|||+.+.||+..+++|++++.
T Consensus 191 ~-----~g-------------~~~~ki~vi~nGvd~~~f~~~~~~----~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~ 248 (406)
T PRK15427 191 K-----MG-------------CPPEKIAVSRMGVDMTRFSPRPVK----APATPLEIISVARLTEKKGLHVAIEACRQLK 248 (406)
T ss_pred H-----cC-------------CCHHHEEEcCCCCCHHHcCCCccc----cCCCCeEEEEEeCcchhcCHHHHHHHHHHHH
Confidence 2 11 123467789999999988542111 0124456899999999999999999999998
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCC
Q psy775 368 EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR 447 (1460)
Q Consensus 368 ~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlr 447 (1460)
+++|++ .++.+|. ++.. +++++++.+.+ ....+.+.|.++++++..+|+.||++|+||..
T Consensus 249 ~~~~~~----~l~ivG~-----G~~~----~~l~~~~~~~~-------l~~~V~~~G~~~~~el~~~l~~aDv~v~pS~~ 308 (406)
T PRK15427 249 EQGVAF----RYRILGI-----GPWE----RRLRTLIEQYQ-------LEDVVEMPGFKPSHEVKAMLDDADVFLLPSVT 308 (406)
T ss_pred hhCCCE----EEEEEEC-----chhH----HHHHHHHHHcC-------CCCeEEEeCCCCHHHHHHHHHhCCEEEECCcc
Confidence 888764 4665653 3333 33444444432 23456778999999999999999999999984
Q ss_pred ------CCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q psy775 448 ------DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 518 (1460)
Q Consensus 448 ------EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~ 518 (1460)
|||+++.+||||| |.|+|+|..+|..+.+. .|++|+|.|++++|++|.+++++++++++...+..+
T Consensus 309 ~~~g~~Eg~p~~llEAma~-----G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar 383 (406)
T PRK15427 309 GADGDMEGIPVALMEAMAV-----GIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAR 383 (406)
T ss_pred CCCCCccCccHHHHHHHhC-----CCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999 67789999999888874 389999999999999999999955554443334444
Q ss_pred HHH-hhcC
Q psy775 519 KRE-KHMN 525 (1460)
Q Consensus 519 ~~v-~~~~ 525 (1460)
+.+ .+++
T Consensus 384 ~~v~~~f~ 391 (406)
T PRK15427 384 EKVETDFN 391 (406)
T ss_pred HHHHHhcC
Confidence 444 4444
No 40
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.82 E-value=2.7e-18 Score=202.98 Aligned_cols=271 Identities=17% Similarity=0.177 Sum_probs=181.3
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCcccc-----ccCCCcHH-HHhhhccCceeeeccHHhHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIF-----RLFPWSDE-ILQGMLGCDMVGFHIEDYCL 284 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eif-----r~LP~r~e-il~gLL~aDlIgF~t~~yar 284 (1460)
..|+|.+|++...+.+.++++. .+.++.+.+|-.+|..... ........ ....+..+|.|-..+....+
T Consensus 83 ~~divh~~~~~~~~~~~~~~~~-----~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 157 (388)
T TIGR02149 83 DADVVHSHTWYTFLAGHLAKKL-----YDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMRE 157 (388)
T ss_pred CCCeEeecchhhhhHHHHHHHh-----cCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHH
Confidence 3699999998876666555432 2577888999765432110 00000111 12233456777666665555
Q ss_pred HHHHHHHhhcCceecCCCcEEEE-CCeEEEEEEeecccCchhhhhhhccchh-hhc--cCCeEEEEecCccccCCHHHHH
Q psy775 285 NFVDCCQRRLGCRVDRKNLLVEH-GGRTVRIRPLPIAIPYERFVQLAQAAPR-VID--TKQKIVLGVDRLDYTKGLVHRL 360 (1460)
Q Consensus 285 ~FL~~~~riLg~~~~~~~~~i~~-~Gr~vkV~viPiGID~~~f~~~~~~~~~-~~~--~~~kvIL~VgRLd~~KGI~~lL 360 (1460)
.+.+. + +-...++.++|+|+|.+.+.+......+ ... .++++++++||+.+.||+..++
T Consensus 158 ~~~~~-----------------~~~~~~~~i~vi~ng~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~li 220 (388)
T TIGR02149 158 DILKY-----------------YPDLDPEKVHVIYNGIDTKEYKPDDGNVVLDRYGIDRSRPYILFVGRITRQKGVPHLL 220 (388)
T ss_pred HHHHH-----------------cCCCCcceEEEecCCCChhhcCCCchHHHHHHhCCCCCceEEEEEcccccccCHHHHH
Confidence 54431 1 1123467889999999887643211111 111 4567899999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccE
Q psy775 361 KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAV 440 (1460)
Q Consensus 361 ~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV 440 (1460)
+|+.++. ++. .++.++.+. +.+ ++.+++.+.+...+... ..++++.+.++.+++..+|+.||+
T Consensus 221 ~a~~~l~---~~~----~l~i~g~g~--~~~---~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~aDv 283 (388)
T TIGR02149 221 DAVHYIP---KDV----QVVLCAGAP--DTP---EVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNAEV 283 (388)
T ss_pred HHHHHHh---hcC----cEEEEeCCC--CcH---HHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhCCE
Confidence 9999873 232 344444321 112 23344444444443321 236777789999999999999999
Q ss_pred EEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCH------HHHHHHHHHHcCCCHHHHH
Q psy775 441 ALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEI------DAAAEVIHRALTMPEDERT 511 (1460)
Q Consensus 441 ~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~------~elA~AI~~aL~m~~~er~ 511 (1460)
+|+||..||||++++|||+| |.|+|+|..+|..+.+.+ |++++|.|. ++++++|.++++.++..++
T Consensus 284 ~v~ps~~e~~g~~~lEA~a~-----G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~~~~ 358 (388)
T TIGR02149 284 FVCPSIYEPLGIVNLEAMAC-----GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKK 358 (388)
T ss_pred EEeCCccCCCChHHHHHHHc-----CCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHHHHH
Confidence 99999999999999999999 677899999888877743 899999998 9999999999987665555
Q ss_pred HHHHHHHHHHhhcC
Q psy775 512 LRMNYLRKREKHMN 525 (1460)
Q Consensus 512 ~R~~~l~~~v~~~~ 525 (1460)
++.++.+....+++
T Consensus 359 ~~~~a~~~~~~~~s 372 (388)
T TIGR02149 359 MGIAGRKRAEEEFS 372 (388)
T ss_pred HHHHHHHHHHHhCC
Confidence 55555555555666
No 41
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.81 E-value=3.6e-18 Score=201.61 Aligned_cols=192 Identities=17% Similarity=0.249 Sum_probs=143.5
Q ss_pred EEEEEEeecccCchhhhhhhccchhhh-c----cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcC
Q psy775 311 TVRIRPLPIAIPYERFVQLAQAAPRVI-D----TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVP 385 (1460)
Q Consensus 311 ~vkV~viPiGID~~~f~~~~~~~~~~~-~----~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~p 385 (1460)
..++.++|+|||.+.|.+......... + .++.+|+++||+++.||+..+++|+..+.+++|+...++.|+.+|.+
T Consensus 159 ~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g 238 (374)
T TIGR03088 159 PAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDG 238 (374)
T ss_pred hhhEEEeccCccccccCCCccchhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCC
Confidence 356788999999988764322111111 1 45779999999999999999999999999998876566788877733
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCC
Q psy775 386 SRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEP 465 (1460)
Q Consensus 386 sr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~ 465 (1460)
+...++ ++.+.+.+ ....+++.|. .+++..+|+.||++++||..||||++++|||+|
T Consensus 239 -----~~~~~~----~~~~~~~~-------~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~----- 295 (374)
T TIGR03088 239 -----PARGAC----EQMVRAAG-------LAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS----- 295 (374)
T ss_pred -----chHHHH----HHHHHHcC-------CcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc-----
Confidence 222233 33333322 2345667774 578899999999999999999999999999999
Q ss_pred CCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 466 PGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 466 ~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|.|+|+|..+|..+.+.+ |++++|.|++++|++|.++++++...+.++.++......+++
T Consensus 296 G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs 358 (374)
T TIGR03088 296 GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAAGRARAEQQFS 358 (374)
T ss_pred CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCC
Confidence 677899999888888743 899999999999999999998665554444444443445555
No 42
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.80 E-value=3.9e-18 Score=206.48 Aligned_cols=192 Identities=19% Similarity=0.217 Sum_probs=144.2
Q ss_pred EEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCC-CcEEEEEEEcCCCCChH
Q psy775 313 RIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHL-EKVTLLQIAVPSRTDVK 391 (1460)
Q Consensus 313 kV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~-~kvvLvqig~psr~~~~ 391 (1460)
++.++|+|+|.+.|.+... ....++++|+++||+.+.||+..+|+||.++.+++|+.. .++.|+++|.......
T Consensus 213 ~~~vi~~gvd~~~~~~~~~----~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~- 287 (419)
T cd03806 213 KPSIVYPPCDVEELLKLPL----DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDD- 287 (419)
T ss_pred CcEEEcCCCCHHHhccccc----ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCccc-
Confidence 6778999999988754321 012356789999999999999999999999999887621 2466777775322211
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEE
Q psy775 392 EYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV 471 (1460)
Q Consensus 392 ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVl 471 (1460)
.++.+++++++.+.+. ...+.|.|.++.+++..+|+.||+++.||..||||++++||||| |.|+|+
T Consensus 288 --~~~~~~L~~~~~~l~l-------~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~-----G~pvIa 353 (419)
T cd03806 288 --EKRVEDLKLLAKELGL-------EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA-----GLIPLA 353 (419)
T ss_pred --HHHHHHHHHHHHHhCC-------CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc-----CCcEEE
Confidence 2234455555555432 23356679999999999999999999999999999999999999 677899
Q ss_pred cCCCCchh-ccc----c--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 472 SPFAGAGE-QMH----E--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 472 Se~aGaa~-~L~----~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|..+|..+ .+. + |++++ |++++|++|.+++++++++++...++.++...+++
T Consensus 354 ~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs 412 (419)
T cd03806 354 HASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFS 412 (419)
T ss_pred EcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhC
Confidence 99877654 443 3 88874 99999999999999988777665555555555555
No 43
>PLN00142 sucrose synthase
Probab=99.79 E-value=7.1e-18 Score=213.72 Aligned_cols=317 Identities=15% Similarity=0.176 Sum_probs=186.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecC----CCCc
Q psy775 178 AEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP----FPPW 253 (1460)
Q Consensus 178 ~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiP----FPs~ 253 (1460)
.+-|..-.++++..++.+.... ....|+|--|...=-+++..|++++ +++..+..|.= .+.+
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~---------~~~PDlIHaHYwdsg~vA~~La~~l-----gVP~v~T~HsL~k~K~~~~ 449 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAEL---------QGKPDLIIGNYSDGNLVASLLAHKL-----GVTQCTIAHALEKTKYPDS 449 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc---------CCCCCEEEECCccHHHHHHHHHHHh-----CCCEEEEcccchhhhcccc
Confidence 4567777777777766654321 1246999999444447777777764 47888888831 1111
Q ss_pred cc--------cccC-CCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCc--eecCCCcEEEECC---eEEEEEEeec
Q psy775 254 DI--------FRLF-PWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGC--RVDRKNLLVEHGG---RTVRIRPLPI 319 (1460)
Q Consensus 254 ei--------fr~L-P~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~--~~~~~~~~i~~~G---r~vkV~viPi 319 (1460)
++ |+.. -...|.+ .|-.||.|--.|+.-....-....+ +++ .....++...++| ...++.++|+
T Consensus 450 ~~~~~~~e~~y~~~~r~~aE~~-a~~~Ad~IIasT~qEi~g~~~~i~q-y~sh~~f~~p~L~rvv~GId~~~~ki~VVpp 527 (815)
T PLN00142 450 DIYWKKFDDKYHFSCQFTADLI-AMNHADFIITSTYQEIAGSKDTVGQ-YESHTAFTLPGLYRVVHGIDVFDPKFNIVSP 527 (815)
T ss_pred CCcccccchhhhhhhchHHHHH-HHHhhhHHHhCcHHHHhcccchhhh-hhcccccccchhhhhhccccccccCeeEECC
Confidence 11 1100 0011111 3334554443332211100000000 000 0000000000011 1237889999
Q ss_pred ccCchhhhhhhccchh--------------------hh----ccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCC
Q psy775 320 AIPYERFVQLAQAAPR--------------------VI----DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLE 375 (1460)
Q Consensus 320 GID~~~f~~~~~~~~~--------------------~~----~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~ 375 (1460)
|+|...|.+......+ .. ..++++|++|||+++.||+..+++||.++.+..++
T Consensus 528 GvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~--- 604 (815)
T PLN00142 528 GADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL--- 604 (815)
T ss_pred CCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC---
Confidence 9999988643211111 01 14567999999999999999999999988666554
Q ss_pred cEEEEEEEcC-CCC--ChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEc---CCCCHHHHHHHHH-hccEEEEccCCC
Q psy775 376 KVTLLQIAVP-SRT--DVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIY---GCISQDELASFYR-DAAVALVTPLRD 448 (1460)
Q Consensus 376 kvvLvqig~p-sr~--~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~---g~v~~eeL~aLY~-aADV~VvpSlrE 448 (1460)
+.|+++|.+ ... ...+..+..+++.+++.+.+.. ..|.++. +..+.++++.+|+ ++|+||+||.+|
T Consensus 605 -~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~------~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~E 677 (815)
T PLN00142 605 -VNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK------GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYE 677 (815)
T ss_pred -cEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC------CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCccc
Confidence 457777754 111 1111222224455555554422 1233331 2456678888777 579999999999
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHH
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRAL----TMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL----~m~~~er~~R~~~l~~~v 521 (1460)
|||++++||||| |.|+|+|..+|..+.+.+ |++|+|.|++++|++|.+++ +++...+++..+++++..
T Consensus 678 gFGLvvLEAMA~-----GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~ 752 (815)
T PLN00142 678 AFGLTVVEAMTC-----GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIY 752 (815)
T ss_pred CCCHHHHHHHHc-----CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 999999999999 677899999999888843 99999999999999998754 555555555555555555
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
++++
T Consensus 753 e~FS 756 (815)
T PLN00142 753 ECYT 756 (815)
T ss_pred HhCC
Confidence 6666
No 44
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.79 E-value=1e-17 Score=205.12 Aligned_cols=260 Identities=18% Similarity=0.221 Sum_probs=171.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHH----HHhh-hccCceeeeccHHhHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDE----ILQG-MLGCDMVGFHIEDYCLN 285 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~e----il~g-LL~aDlIgF~t~~yar~ 285 (1460)
..|+|.+|+...+.++.++-.+. .+.++.+.+|.-+|...-....++... +.+. ...+|.|...+....+.
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~----~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~ 219 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKL----LCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKE 219 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHH----hCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 47999999877666555543222 146777777764443211001111000 0111 12366666666655544
Q ss_pred HHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccch---hhh--ccCCeEEEEecCccccCCHHHHH
Q psy775 286 FVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP---RVI--DTKQKIVLGVDRLDYTKGLVHRL 360 (1460)
Q Consensus 286 FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~---~~~--~~~~kvIL~VgRLd~~KGI~~lL 360 (1460)
+.+. + .....++.++|+|||.+.|.+...... ... ..++++|+++||+.+.||+..++
T Consensus 220 l~~~-----~------------~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~li 282 (465)
T PLN02871 220 LEAA-----G------------VTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRLGAEKNLDFLK 282 (465)
T ss_pred HHHc-----C------------CCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCCeEEEEeCCCchhhhHHHHH
Confidence 4331 0 011246788999999998865322111 111 13678999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccE
Q psy775 361 KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAV 440 (1460)
Q Consensus 361 ~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV 440 (1460)
+|++++ |++ .|+++|. ++.. +++++++... +| .|.|.++++++..+|+.||+
T Consensus 283 ~a~~~~----~~~----~l~ivG~-----G~~~----~~l~~~~~~~----------~V-~f~G~v~~~ev~~~~~~aDv 334 (465)
T PLN02871 283 RVMERL----PGA----RLAFVGD-----GPYR----EELEKMFAGT----------PT-VFTGMLQGDELSQAYASGDV 334 (465)
T ss_pred HHHHhC----CCc----EEEEEeC-----ChHH----HHHHHHhccC----------Ce-EEeccCCHHHHHHHHHHCCE
Confidence 988654 554 4666662 3333 3333333221 23 45699999999999999999
Q ss_pred EEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc------cEEECCCCHHHHHHHHHHHcCCCHHHHHHHH
Q psy775 441 ALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE------ALICNPYEIDAAAEVIHRALTMPEDERTLRM 514 (1460)
Q Consensus 441 ~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~------allVNP~D~~elA~AI~~aL~m~~~er~~R~ 514 (1460)
+|+||..||||++++||||| |.|+|+|..+|..+.+.+ |++++|.|++++|++|.++++++...++++.
T Consensus 335 ~V~pS~~E~~g~~vlEAmA~-----G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~ 409 (465)
T PLN02871 335 FVMPSESETLGFVVLEAMAS-----GVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPELRERMGA 409 (465)
T ss_pred EEECCcccccCcHHHHHHHc-----CCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99999999999999999999 677899999888777632 8999999999999999999986654444443
Q ss_pred HHHHHHHhhcC
Q psy775 515 NYLRKREKHMN 525 (1460)
Q Consensus 515 ~~l~~~v~~~~ 525 (1460)
..++.+.+++
T Consensus 410 -~a~~~~~~fs 419 (465)
T PLN02871 410 -AAREEVEKWD 419 (465)
T ss_pred -HHHHHHHhCC
Confidence 3445566666
No 45
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.79 E-value=7.2e-18 Score=195.83 Aligned_cols=257 Identities=14% Similarity=0.070 Sum_probs=171.8
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHH-HhhhccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEI-LQGMLGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~ei-l~gLL~aDlIgF~t~~yar~FL~~ 289 (1460)
+.|+|.+|..+...++.++.+..+ ...+.+..|..+...+.+........+ ...+..+|.+-..+....+.+..
T Consensus 80 ~~Dvv~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~- 154 (358)
T cd03812 80 KYDIVHVHGSSASGFILLAAKKAG----VKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFG- 154 (358)
T ss_pred CCCEEEEeCcchhHHHHHHHhhCC----CCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHh-
Confidence 579999999987777776665432 344566777766544433222111000 11122345554444433332221
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc----cCCeEEEEecCccccCCHHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID----TKQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~----~~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
. ....++.++|+|+|.+.+...........+ .++.+|+++||+.+.||+..+++|+..
T Consensus 155 ----------------~--~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~ 216 (358)
T cd03812 155 ----------------K--VKNKKFKVIPNGIDLEKFIFNEEIRKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAE 216 (358)
T ss_pred ----------------C--CCcccEEEEeccCcHHHcCCCchhhhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHH
Confidence 0 123467899999999877543221111111 567899999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
+.+++|++ .++.+|. ++....+++.++ +. ++.+.+.+.|. .+++..+|+.||++|+||
T Consensus 217 l~~~~~~~----~l~ivG~-----g~~~~~~~~~~~----~~-------~~~~~v~~~g~--~~~~~~~~~~adi~v~ps 274 (358)
T cd03812 217 LLKKNPNA----KLLLVGD-----GELEEEIKKKVK----EL-------GLEDKVIFLGV--RNDVPELLQAMDVFLFPS 274 (358)
T ss_pred HHHhCCCe----EEEEEeC-----CchHHHHHHHHH----hc-------CCCCcEEEecc--cCCHHHHHHhcCEEEecc
Confidence 99988875 4666663 222333333332 22 22233455576 678999999999999999
Q ss_pred CCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHH
Q psy775 446 LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 517 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l 517 (1460)
..||||++++||||| |.|+|+|+.+|..+.+.+ +.+..+.+++++|++|.++++++..+++++..+.
T Consensus 275 ~~E~~~~~~lEAma~-----G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~ 343 (358)
T cd03812 275 LYEGLPLVLIEAQAS-----GLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKK 343 (358)
T ss_pred cccCCCHHHHHHHHh-----CCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhh
Confidence 999999999999999 778899999998887754 5555566789999999999999887766654443
No 46
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.79 E-value=2.5e-17 Score=208.84 Aligned_cols=317 Identities=16% Similarity=0.167 Sum_probs=190.7
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecC----CCCc
Q psy775 178 AEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP----FPPW 253 (1460)
Q Consensus 178 ~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiP----FPs~ 253 (1460)
.+-|.....+++..++.+.... ....|+|-.|...=-+++..|++++ +++..+..|.. .+.+
T Consensus 361 ~~l~p~l~~f~~~~~~~~~~~~---------~~~pDlIHahy~d~glva~lla~~l-----gVP~v~t~HsL~~~K~~~~ 426 (784)
T TIGR02470 361 FEIWPYLETFAEDAEKEILAEL---------QGKPDLIIGNYSDGNLVASLLARKL-----GVTQCTIAHALEKTKYPDS 426 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc---------CCCCCEEEECCCchHHHHHHHHHhc-----CCCEEEECCcchhhccccc
Confidence 4567777777777766654321 1246999888655557777777654 46666666742 1111
Q ss_pred cc-cccCCCcHH-------HHhhhccCceeeeccHHhHHHHHHHHHhhcCce--ecCCCcEEEECC---eEEEEEEeecc
Q psy775 254 DI-FRLFPWSDE-------ILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCR--VDRKNLLVEHGG---RTVRIRPLPIA 320 (1460)
Q Consensus 254 ei-fr~LP~r~e-------il~gLL~aDlIgF~t~~yar~FL~~~~riLg~~--~~~~~~~i~~~G---r~vkV~viPiG 320 (1460)
.. +..+..+.. =+..|-.||.|--.|+.-+..-.+.+.+ +++- .....+.-..+| ...|+.++|+|
T Consensus 427 g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPG 505 (784)
T TIGR02470 427 DIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVFDPKFNIVSPG 505 (784)
T ss_pred ccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCCcCCeEEECCC
Confidence 11 111111100 1144556777777665321111111000 0000 000010000111 23488999999
Q ss_pred cCchhhhhhhccchh--------------------hh----ccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCc
Q psy775 321 IPYERFVQLAQAAPR--------------------VI----DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEK 376 (1460)
Q Consensus 321 ID~~~f~~~~~~~~~--------------------~~----~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~k 376 (1460)
+|++.|.+......+ .. ..++++|++|||+++.||+..+++||.++.+..+ .
T Consensus 506 VD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~ 581 (784)
T TIGR02470 506 ADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----L 581 (784)
T ss_pred cChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----C
Confidence 999988654322111 00 1467899999999999999999999987643333 3
Q ss_pred EEEEEEEcCCCC---ChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC-CCHHHHHHHHH----hccEEEEccCCC
Q psy775 377 VTLLQIAVPSRT---DVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC-ISQDELASFYR----DAAVALVTPLRD 448 (1460)
Q Consensus 377 vvLvqig~psr~---~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~-v~~eeL~aLY~----aADV~VvpSlrE 448 (1460)
+.|+++|.+... ...+..+..+++.+++.+.+.. .-+.+.|. .+..++..+|+ .+||||+||.+|
T Consensus 582 ~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~-------g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~E 654 (784)
T TIGR02470 582 VNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLH-------GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYE 654 (784)
T ss_pred eEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCC-------CeEEEccCcCCcccHHHHHHHhhccCcEEEECCccc
Confidence 567777754321 1122223444556666554322 22444565 35566666665 347999999999
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHH
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRAL----TMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL----~m~~~er~~R~~~l~~~v 521 (1460)
||||+++||||| |.|+|+|..+|..+.+.+ |++|+|.|++++|++|.+++ +++...++.+.+++++..
T Consensus 655 pFGLvvLEAMAc-----GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~ 729 (784)
T TIGR02470 655 AFGLTVLEAMTC-----GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIY 729 (784)
T ss_pred CCCHHHHHHHHc-----CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 999999999999 677899999999988843 99999999999999999876 455454555555555555
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
++++
T Consensus 730 ~~FS 733 (784)
T TIGR02470 730 EKYT 733 (784)
T ss_pred HhCC
Confidence 6666
No 47
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.79 E-value=9.8e-18 Score=198.47 Aligned_cols=193 Identities=17% Similarity=0.240 Sum_probs=142.9
Q ss_pred EEeecccCchhhhhhhccc-hhh--hccCCeEEEEecCccccCCHHHHHHHHHHHHHhC---CCCCCcEEEEEEEcCCCC
Q psy775 315 RPLPIAIPYERFVQLAQAA-PRV--IDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH---PEHLEKVTLLQIAVPSRT 388 (1460)
Q Consensus 315 ~viPiGID~~~f~~~~~~~-~~~--~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~---P~~~~kvvLvqig~psr~ 388 (1460)
.++|+|+|.+.|.+..... ... ...+..+++++||+.+.||+..+++|++++.++. |+ +.|+.+|.+...
T Consensus 182 ~vi~n~vd~~~~~~~~~~~~~~~~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~----~~l~i~G~~~~~ 257 (392)
T cd03805 182 EVVYPCVDTDSFESTSEDPDPGLLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKN----VRLVIAGGYDPR 257 (392)
T ss_pred ceeCCCcCHHHcCcccccccccccccCCCceEEEEEeeecccCChHHHHHHHHHHHhhcccccC----eEEEEEcCCCCC
Confidence 5889999998886542221 111 1156788999999999999999999999998876 55 457777754321
Q ss_pred ChHHHHHHHHHHHHHHHH-HhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCC
Q psy775 389 DVKEYQDLKEEMDQLVGR-INGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPG 467 (1460)
Q Consensus 389 ~~~ey~~L~~ev~~lv~~-IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~G 467 (1460)
.....++.+++.+++.+ .+. ..-+.|.|.++.+++..+|+.||++++||..||||++++||||| |.
T Consensus 258 -~~~~~~~~~~l~~~~~~~~~l-------~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~-----G~ 324 (392)
T cd03805 258 -VAENVEYLEELQRLAEELLLL-------EDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYA-----GK 324 (392)
T ss_pred -CchhHHHHHHHHHHHHHhcCC-------CceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHc-----CC
Confidence 11222344455555544 221 23355679999999999999999999999999999999999999 67
Q ss_pred eEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 468 VLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 468 vlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|+|+|..+|..+.+.+ |++++| |++++|++|.++++++...++++.++......+++
T Consensus 325 PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~~~a~~~~~~~~s 384 (392)
T cd03805 325 PVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMGAAGRKRVKEKFS 384 (392)
T ss_pred CEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhcC
Confidence 7899999888877744 888877 99999999999999876655555555444444455
No 48
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.79 E-value=1.4e-18 Score=213.39 Aligned_cols=188 Identities=22% Similarity=0.247 Sum_probs=142.5
Q ss_pred eEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCC
Q psy775 310 RTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTD 389 (1460)
Q Consensus 310 r~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~ 389 (1460)
...++.++|+|||.+.|.+.... ....++++|+++||+.+.||+..+++|+..+.++.|++ .++++|... .+
T Consensus 265 ~~~ki~vIpNgid~~~f~~~~~~---~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~-~~ 336 (475)
T cd03813 265 DPEKIRVIPNGIDPERFAPARRA---RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD-ED 336 (475)
T ss_pred CHHHeEEeCCCcCHHHcCCcccc---ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC-cC
Confidence 44578899999999988654221 01145778999999999999999999999999888875 466565332 12
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeE
Q psy775 390 VKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVL 469 (1460)
Q Consensus 390 ~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~Gvl 469 (1460)
.++.+++++++.+.+.. ..+.|.| .+++..+|+.||++|+||..|||+++++||||| |.|+
T Consensus 337 ----~~~~~e~~~li~~l~l~-------~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~-----G~PV 397 (475)
T cd03813 337 ----PEYAEECRELVESLGLE-------DNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAA-----GIPV 397 (475)
T ss_pred ----hHHHHHHHHHHHHhCCC-------CeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHc-----CCCE
Confidence 23455666666665532 2345557 677889999999999999999999999999999 6778
Q ss_pred EEcCCCCchhcccc---------cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 470 IVSPFAGAGEQMHE---------ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 470 VlSe~aGaa~~L~~---------allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|+|..+|+.+.+.+ |++++|.|++++|++|.++++++...+++..++ ++.+.+++
T Consensus 398 Vatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a-~~~v~~~~ 461 (475)
T cd03813 398 VATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPELRRAMGEAG-RKRVERYY 461 (475)
T ss_pred EECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHhC
Confidence 99999888777743 899999999999999999999766555554444 44555444
No 49
>PLN02939 transferase, transferring glycosyl groups
Probab=99.78 E-value=1.6e-17 Score=211.29 Aligned_cols=345 Identities=11% Similarity=0.094 Sum_probs=216.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhh-cCcCceEEEEeeCC-----CCCccccc-cCc---
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADE-QNLKFKLGFFLHIP-----FPPWDIFR-LFP--- 615 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~-~~~~~kigfFLHiP-----fP~~e~fr-~lP--- 615 (1460)
|+.++++.+... + ..+|+|-.||||--++|.++.+.... ...+.+..|..|-= ||...+.. .+|
T Consensus 596 FsrAaLe~~~~~--~----~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~ 669 (977)
T PLN02939 596 FSRAALELLYQS--G----KKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQ 669 (977)
T ss_pred HHHHHHHHHHhc--C----CCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHH
Confidence 777777765432 1 23479999999998885544422211 12446788888872 43222110 111
Q ss_pred ------------cHHHHH-hhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHh
Q psy775 616 ------------WSDEIL-QGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFV 682 (1460)
Q Consensus 616 ------------~r~eIL-~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~ 682 (1460)
..-.+| -++..||.|-.-++.|++.-++ . .|.... -.++.+..++.++|+|||++.|.
T Consensus 670 l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e--~G~GL~-----~~L~~~~~Kl~gIlNGID~e~wn 740 (977)
T PLN02939 670 LDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--E--GGRGLQ-----DTLKFHSKKFVGILNGIDTDTWN 740 (977)
T ss_pred ccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--H--hccchH-----HHhccccCCceEEecceehhhcC
Confidence 111233 3566789998888988877554 1 111110 01234567789999999999887
Q ss_pred HHHhcCccccccchhhhccccccccchhh--HHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHH
Q psy775 683 QLAQAAPRVIDTKQKIVLGVDRLDYTKGL--IESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRL 760 (1460)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL 760 (1460)
+.... .+ -...+..++..+. -..+|+++|++. -..+.++|++|||+.+.||+...+
T Consensus 741 PatD~---~L------~~~Ys~~dl~GK~~nK~aLRkelGL~~-------------~d~d~pLIg~VGRL~~QKGiDlLl 798 (977)
T PLN02939 741 PSTDR---FL------KVQYNANDLQGKAANKAALRKQLGLSS-------------ADASQPLVGCITRLVPQKGVHLIR 798 (977)
T ss_pred Ccccc---cc------ccccChhhhhhhhhhhHHHHHHhCCCc-------------ccccceEEEEeecCCcccChHHHH
Confidence 53211 00 0001111111100 134666665430 002468999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccE
Q psy775 761 KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAV 840 (1460)
Q Consensus 761 ~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv 840 (1460)
+|+.++++ ++ +.|+.+|.+.. + .+++++..++.+.+.. ..+.|.+.++......+|+.||+
T Consensus 799 eA~~~Ll~--~d----vqLVIvGdGp~---~---~~e~eL~~La~~l~l~-------drV~FlG~~de~lah~IYAaADI 859 (977)
T PLN02939 799 HAIYKTAE--LG----GQFVLLGSSPV---P---HIQREFEGIADQFQSN-------NNIRLILKYDEALSHSIYAASDM 859 (977)
T ss_pred HHHHHHhh--cC----CEEEEEeCCCc---H---HHHHHHHHHHHHcCCC-------CeEEEEeccCHHHHHHHHHhCCE
Confidence 99999875 22 45666664421 1 3456677777765432 23666778888888899999999
Q ss_pred EEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCC
Q psy775 841 ALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINE 920 (1460)
Q Consensus 841 ~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 920 (1460)
||+||.+||||++.+|||+| +.|+|+|..+|..++. .+++.+
T Consensus 860 FLmPSr~EPfGLvqLEAMAy-----GtPPVVs~vGGL~DtV------~d~d~e--------------------------- 901 (977)
T PLN02939 860 FIIPSMFEPCGLTQMIAMRY-----GSVPIVRKTGGLNDSV------FDFDDE--------------------------- 901 (977)
T ss_pred EEECCCccCCcHHHHHHHHC-----CCCEEEecCCCCccee------ecCCcc---------------------------
Confidence 99999999999999999999 7799999999987711 110000
Q ss_pred CCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhC----CCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 921 PPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALT----MPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 921 ~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~----m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
.+.+ ...++++++|.|+++++++|.+++. .+...++++.+. ....+++...++++.+-+..+
T Consensus 902 ----~i~~-------eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a---m~~dFSWe~~A~qYeeLY~~l 967 (977)
T PLN02939 902 ----TIPV-------ELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD---MNIDFSWDSSASQYEELYQRA 967 (977)
T ss_pred ----cccc-------CCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHH
Confidence 0000 1135799999999999999999986 233333333332 335688899988887766665
Q ss_pred hh
Q psy775 997 IT 998 (1460)
Q Consensus 997 ~~ 998 (1460)
..
T Consensus 968 l~ 969 (977)
T PLN02939 968 VA 969 (977)
T ss_pred HH
Confidence 53
No 50
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.78 E-value=1.8e-17 Score=193.75 Aligned_cols=261 Identities=16% Similarity=0.125 Sum_probs=175.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecC----CCCccccccCCCcHHHH-hhhccCceeeeccHHhHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP----FPPWDIFRLFPWSDEIL-QGMLGCDMVGFHIEDYCLN 285 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiP----FPs~eifr~LP~r~eil-~gLL~aDlIgF~t~~yar~ 285 (1460)
..|+|.+|+....+....+.++. +.++.+.+|-- .+.............+. ..+..+|.|-+.+....+.
T Consensus 82 ~~dvvh~~~~~~~~~~~~~~~~~-----~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 156 (367)
T cd05844 82 RPDLVHAHFGFDGVYALPLARRL-----GVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIRDR 156 (367)
T ss_pred CCCEEEeccCchHHHHHHHHHHc-----CCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHHHH
Confidence 36999999776544444443322 46777777832 12111111000011112 2223477777777654444
Q ss_pred HHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHH
Q psy775 286 FVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 286 FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
+.+. +....++.++|+|+|.+.|.+... ..+.++++++||+.+.||+..+++|+..
T Consensus 157 ~~~~------------------~~~~~~i~vi~~g~d~~~~~~~~~------~~~~~~i~~~G~~~~~K~~~~li~a~~~ 212 (367)
T cd05844 157 LLAL------------------GFPPEKVHVHPIGVDTAKFTPATP------ARRPPRILFVGRFVEKKGPLLLLEAFAR 212 (367)
T ss_pred HHHc------------------CCCHHHeEEecCCCCHHhcCCCCC------CCCCcEEEEEEeeccccChHHHHHHHHH
Confidence 4331 122346778999999988754211 1345689999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
+.+++|++ .|+++|. ++.. ++++.++.+.+ +.+.+.+.|.++.+++..+|+.||++++||
T Consensus 213 l~~~~~~~----~l~ivG~-----g~~~----~~~~~~~~~~~-------~~~~v~~~g~~~~~~l~~~~~~ad~~v~ps 272 (367)
T cd05844 213 LARRVPEV----RLVIIGD-----GPLL----AALEALARALG-------LGGRVTFLGAQPHAEVRELMRRARIFLQPS 272 (367)
T ss_pred HHHhCCCe----EEEEEeC-----chHH----HHHHHHHHHcC-------CCCeEEECCCCCHHHHHHHHHhCCEEEECc
Confidence 98888875 4666662 2222 33444444322 223356679999999999999999999999
Q ss_pred C------CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Q psy775 446 L------RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNY 516 (1460)
Q Consensus 446 l------rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~ 516 (1460)
. .||||++++||||| |.|+|+|+.+|..+.+. .|++++|.|+++++++|.+++++++..++++.++
T Consensus 273 ~~~~~~~~E~~~~~~~EA~a~-----G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a 347 (367)
T cd05844 273 VTAPSGDAEGLPVVLLEAQAS-----GVPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADPDLRARMGAAG 347 (367)
T ss_pred ccCCCCCccCCchHHHHHHHc-----CCCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 7 59999999999999 67889999998887773 3899999999999999999998765444444444
Q ss_pred HHHHHhhcC
Q psy775 517 LRKREKHMN 525 (1460)
Q Consensus 517 l~~~v~~~~ 525 (1460)
......+++
T Consensus 348 ~~~~~~~~s 356 (367)
T cd05844 348 RRRVEERFD 356 (367)
T ss_pred HHHHHHHCC
Confidence 333334455
No 51
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.78 E-value=6.9e-18 Score=206.47 Aligned_cols=258 Identities=19% Similarity=0.242 Sum_probs=172.5
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhc-cCCCceEEEEEecCCCCc----ccccc--CCC--------------cHHHHhhh
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADE-QNLKFKLGFFLHIPFPPW----DIFRL--FPW--------------SDEILQGM 269 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~-~~~~~~IgfFlHiPFPs~----eifr~--LP~--------------r~eil~gL 269 (1460)
..|+|-+||+|-.++|.+++..... ...+.++.|..|-+.+.. ..+.. +++ ..-+-.++
T Consensus 129 ~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (476)
T cd03791 129 KPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGI 208 (476)
T ss_pred CCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHH
Confidence 5799999999999999999875310 012679999999864321 11100 011 01222334
Q ss_pred ccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEE--ECCeEEEEEEeecccCchhhhhhhccc--------------
Q psy775 270 LGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVE--HGGRTVRIRPLPIAIPYERFVQLAQAA-------------- 333 (1460)
Q Consensus 270 L~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~--~~Gr~vkV~viPiGID~~~f~~~~~~~-------------- 333 (1460)
..||.|-.-++.|++..++.-. | . .++ ...+..++.++|+|||.+.|.+.....
T Consensus 209 ~~ad~v~~vS~~~~~~i~~~~~---~------~-gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~ 278 (476)
T cd03791 209 VYADAVTTVSPTYAREILTPEF---G------E-GLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKA 278 (476)
T ss_pred HhcCcCeecCHhHHHHhCCCCC---C------c-chHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHH
Confidence 4555555555555443332100 0 0 000 112346889999999998886532210
Q ss_pred ---hhhhc-------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHH
Q psy775 334 ---PRVID-------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQL 403 (1460)
Q Consensus 334 ---~~~~~-------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~l 403 (1460)
..+++ .++++|+++||+.+.||+..+++|++++.++. +.|+.+|.+ + + .+.+++.++
T Consensus 279 ~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g---~-~---~~~~~~~~~ 345 (476)
T cd03791 279 ENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILGSG---D-P---EYEEALREL 345 (476)
T ss_pred HHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEecC---C-H---HHHHHHHHH
Confidence 01111 46789999999999999999999999987653 446666633 1 1 233444444
Q ss_pred HHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-
Q psy775 404 VGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH- 482 (1460)
Q Consensus 404 v~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~- 482 (1460)
+.+... .++++.+ .+.+++..+|+.||++++||.+||||++.+|||+| |.|+|+|..+|..+.+.
T Consensus 346 ~~~~~~--------~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~-----G~pvI~~~~gg~~e~v~~ 411 (476)
T cd03791 346 AARYPG--------RVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY-----GTVPIVRATGGLADTVID 411 (476)
T ss_pred HHhCCC--------cEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC-----CCCCEECcCCCccceEeC
Confidence 443211 3455544 55777789999999999999999999999999999 67779999999988883
Q ss_pred --------ccEEECCCCHHHHHHHHHHHcCC
Q psy775 483 --------EALICNPYEIDAAAEVIHRALTM 505 (1460)
Q Consensus 483 --------~allVNP~D~~elA~AI~~aL~m 505 (1460)
.|++++|.|+++++++|.++++.
T Consensus 412 ~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~ 442 (476)
T cd03791 412 YNEDTGEGTGFVFEGYNADALLAALRRALAL 442 (476)
T ss_pred CcCCCCCCCeEEeCCCCHHHHHHHHHHHHHH
Confidence 48999999999999999998864
No 52
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.78 E-value=2.6e-17 Score=196.58 Aligned_cols=243 Identities=17% Similarity=0.196 Sum_probs=178.7
Q ss_pred hcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccc
Q psy775 623 GMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGV 702 (1460)
Q Consensus 623 ~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~ 702 (1460)
.+-.+|.|.+.+...++.+.+. . +....++.++|+|||.+.|.+...
T Consensus 160 ~~~~~d~vi~~s~~~~~~~~~~----~-------------~~~~~ki~vi~ngvd~~~~~~~~~---------------- 206 (405)
T TIGR03449 160 LVDNADRLIANTDEEARDLVRH----Y-------------DADPDRIDVVAPGADLERFRPGDR---------------- 206 (405)
T ss_pred HHHhcCeEEECCHHHHHHHHHH----c-------------CCChhhEEEECCCcCHHHcCCCcH----------------
Confidence 3457899999998887776542 1 122346788999999887753100
Q ss_pred cccccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEE
Q psy775 703 DRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQI 782 (1460)
Q Consensus 703 ~~~~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi 782 (1460)
...++++++ ..++++|+++||+.+.||+..+++|++++++++|+. ++.|+.+
T Consensus 207 ----------~~~~~~~~~----------------~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~--~~~l~iv 258 (405)
T TIGR03449 207 ----------ATERARLGL----------------PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDR--NLRVIVV 258 (405)
T ss_pred ----------HHHHHhcCC----------------CCCCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCc--ceEEEEE
Confidence 122333332 246789999999999999999999999999999873 5788888
Q ss_pred EcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeecc
Q psy775 783 AVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQI 862 (1460)
Q Consensus 783 ~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~ 862 (1460)
|.+.....+. .+++++++++.+. ...+.+.|.++.+++..+|+.||++++||..||||++.+|||+|
T Consensus 259 G~~~~~g~~~----~~~l~~~~~~~~l-------~~~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~-- 325 (405)
T TIGR03449 259 GGPSGSGLAT----PDALIELAAELGI-------ADRVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQAC-- 325 (405)
T ss_pred eCCCCCcchH----HHHHHHHHHHcCC-------CceEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHc--
Confidence 8654321122 2345555554432 33477889999999999999999999999999999999999999
Q ss_pred CCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEE
Q psy775 863 NEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALI 942 (1460)
Q Consensus 863 ~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~all 942 (1460)
+.|+|+|..+|..+.+ .++ ..+++
T Consensus 326 ---G~Pvi~~~~~~~~e~i---------------------------------------------~~~--------~~g~~ 349 (405)
T TIGR03449 326 ---GTPVVAARVGGLPVAV---------------------------------------------ADG--------ETGLL 349 (405)
T ss_pred ---CCCEEEecCCCcHhhh---------------------------------------------ccC--------CceEE
Confidence 7899999988866611 111 34689
Q ss_pred eCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 943 CNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 943 VnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
++|.|++++|++|.++++.+....+.+. ..++.+..++++..++++++-+.+.
T Consensus 350 ~~~~d~~~la~~i~~~l~~~~~~~~~~~-~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 350 VDGHDPADWADALARLLDDPRTRIRMGA-AAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred CCCCCHHHHHHHHHHHHhCHHHHHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999999999999986544334443 3456677889998888888776654
No 53
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.77 E-value=2.7e-17 Score=190.60 Aligned_cols=261 Identities=20% Similarity=0.192 Sum_probs=172.7
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhh-ccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGM-LGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gL-L~aDlIgF~t~~yar~FL~~ 289 (1460)
..|+|++|.+|..++..+++...+ ..++....|...+.... +..+.+.. ..++.+...+....+.|+..
T Consensus 79 ~pdiv~~~~~~~~~~~~l~~~~~~----~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 148 (360)
T cd04951 79 KPDVVHAHMFHANIFARLLRLFLP----SPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDYFIAS 148 (360)
T ss_pred CCCEEEEcccchHHHHHHHHhhCC----CCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHHHHhc
Confidence 478999999998888777765422 45666667743221100 11111110 01333333344333333331
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc-----cCCeEEEEecCccccCCHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID-----TKQKIVLGVDRLDYTKGLVHRLKAFE 364 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~-----~~~kvIL~VgRLd~~KGI~~lL~Af~ 364 (1460)
..-...++.++|+|+|...|...........+ .++++++++||+.+.||+..+++|+.
T Consensus 149 -----------------~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~ 211 (360)
T cd04951 149 -----------------KAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFA 211 (360)
T ss_pred -----------------cCCCcccEEEEccccchhhcCcchHHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHH
Confidence 00123467789999998877543221111111 46789999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEc
Q psy775 365 TLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVT 444 (1460)
Q Consensus 365 ~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vvp 444 (1460)
++.+++|++ .|+++|.+ +..+++++ .+.+.+. .+.+.+.|. .+++..+|+.||++++|
T Consensus 212 ~l~~~~~~~----~l~i~G~g-----~~~~~~~~----~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~v~~ 269 (360)
T cd04951 212 KLLSDYLDI----KLLIAGDG-----PLRATLER----LIKALGL-------SNRVKLLGL--RDDIAAYYNAADLFVLS 269 (360)
T ss_pred HHHhhCCCe----EEEEEcCC-----CcHHHHHH----HHHhcCC-------CCcEEEecc--cccHHHHHHhhceEEec
Confidence 999888775 46656532 22223333 3333222 233445575 46788999999999999
Q ss_pred cCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc-cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhh
Q psy775 445 PLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523 (1460)
Q Consensus 445 SlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~-allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~ 523 (1460)
|..||||++++||||| |.|+|+|..+|..+.+.+ +..++|.|+++++++|.+++++++..++...+......+.
T Consensus 270 s~~e~~~~~~~Ea~a~-----G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~~ 344 (360)
T cd04951 270 SAWEGFGLVVAEAMAC-----ELPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVKK 344 (360)
T ss_pred ccccCCChHHHHHHHc-----CCCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999 677899999888887765 8999999999999999999977777766665553334444
Q ss_pred cC
Q psy775 524 MN 525 (1460)
Q Consensus 524 ~~ 525 (1460)
++
T Consensus 345 ~s 346 (360)
T cd04951 345 FS 346 (360)
T ss_pred cC
Confidence 44
No 54
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.77 E-value=1.1e-16 Score=187.52 Aligned_cols=266 Identities=14% Similarity=0.107 Sum_probs=174.5
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCC-CcHHHHhhhccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFP-WSDEILQGMLGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP-~r~eil~gLL~aDlIgF~t~~yar~FL~~ 289 (1460)
..|+|.+|.+.-..++.++..++.. ..+.++.+.+|-.-. .....-+ .+.-+...+-.+|.|...+......+.+.
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~--~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 160 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILG-KKDLPVVTTLHGTDI--TLVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYEL 160 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcC-cCCCcEEEEEcCCcc--ccccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHh
Confidence 4789999987655566666543321 124677777883210 0111112 12223344556898888888766655441
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh-c--cCCeEEEEecCccccCCHHHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI-D--TKQKIVLGVDRLDYTKGLVHRLKAFETL 366 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~-~--~~~kvIL~VgRLd~~KGI~~lL~Af~~l 366 (1460)
. +...++.++|+|+|...|.+......+.. . .++++++++||+.+.||+..+++|+.++
T Consensus 161 ~------------------~~~~~i~vi~n~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~a~~~l 222 (371)
T cd04962 161 F------------------DITKEIEVIPNFVDEDRFRPKPDEALKRRLGAPEGEKVLIHISNFRPVKRIDDVIRIFAKV 222 (371)
T ss_pred c------------------CCcCCEEEecCCcCHhhcCCCchHHHHHhcCCCCCCeEEEEecccccccCHHHHHHHHHHH
Confidence 1 11235778999999877754322111111 1 5678999999999999999999999988
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC
Q psy775 367 LEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL 446 (1460)
Q Consensus 367 L~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl 446 (1460)
.++. ++ .++.+|.+ +....+++. +.+.+ ..+.+.+.|.. +++..+|+.||++++||.
T Consensus 223 ~~~~-~~----~l~i~G~g-----~~~~~~~~~----~~~~~-------~~~~v~~~g~~--~~~~~~~~~~d~~v~ps~ 279 (371)
T cd04962 223 RKEV-PA----RLLLVGDG-----PERSPAERL----ARELG-------LQDDVLFLGKQ--DHVEELLSIADLFLLPSE 279 (371)
T ss_pred HhcC-Cc----eEEEEcCC-----cCHHHHHHH----HHHcC-------CCceEEEecCc--ccHHHHHHhcCEEEeCCC
Confidence 6553 33 35555533 222233333 33322 12224445754 578999999999999999
Q ss_pred CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhh
Q psy775 447 RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523 (1460)
Q Consensus 447 rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~ 523 (1460)
.||||++++|||+| |.|+|+|+.+|..+.+.+ |++++|.|+++++++|.++++++....+++.++......+
T Consensus 280 ~E~~~~~~~EAma~-----g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 354 (371)
T cd04962 280 KESFGLAALEAMAC-----GVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNRAAER 354 (371)
T ss_pred cCCCccHHHHHHHc-----CCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999 677899999998887743 8999999999999999999986655444444443333445
Q ss_pred cC
Q psy775 524 MN 525 (1460)
Q Consensus 524 ~~ 525 (1460)
++
T Consensus 355 fs 356 (371)
T cd04962 355 FD 356 (371)
T ss_pred CC
Confidence 55
No 55
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.77 E-value=4.3e-17 Score=189.13 Aligned_cols=261 Identities=18% Similarity=0.146 Sum_probs=179.7
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|.+|..+...+..+..+. .+.++.+.+|-.++... +...+ +..+|.+-+.+......+.+
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~~-----~~~~~i~~~h~~~~~~~------~~~~~---~~~~~~vi~~s~~~~~~~~~-- 141 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAARR-----TRPPFVTTVHGFYSVNF------RYNAI---MARGDRVIAVSNFIADHIRE-- 141 (355)
T ss_pred CCCEEEECCCchhHHHHHHHHh-----cCCCEEEEeCCchhhHH------HHHHH---HHhcCEEEEeCHHHHHHHHH--
Confidence 4799999987765555544432 25788889996655332 22233 33578877766655444431
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchh---hh-----ccCCeEEEEecCccccCCHHHHHHH
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPR---VI-----DTKQKIVLGVDRLDYTKGLVHRLKA 362 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~---~~-----~~~~kvIL~VgRLd~~KGI~~lL~A 362 (1460)
. ++....++.++|+|+|.+.|.+....... .+ ..++++++++||+.+.||+..+++|
T Consensus 142 --~-------------~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~ 206 (355)
T cd03819 142 --N-------------YGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEA 206 (355)
T ss_pred --h-------------cCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHH
Confidence 1 11223467789999999887543221111 11 1467889999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEE
Q psy775 363 FETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVAL 442 (1460)
Q Consensus 363 f~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~V 442 (1460)
+..+.+++|++ .++.+|..... +.+.+.+.+.+.+.+. .+-+.+.|. .+++..+|+.||+++
T Consensus 207 ~~~l~~~~~~~----~l~ivG~~~~~-----~~~~~~~~~~~~~~~~-------~~~v~~~g~--~~~~~~~l~~ad~~i 268 (355)
T cd03819 207 LARLKKDDPDV----HLLIVGDAQGR-----RFYYAELLELIKRLGL-------QDRVTFVGH--CSDMPAAYALADIVV 268 (355)
T ss_pred HHHHHhcCCCe----EEEEEECCccc-----chHHHHHHHHHHHcCC-------cceEEEcCC--cccHHHHHHhCCEEE
Confidence 99998876654 46666644321 2233334333333222 222445576 778999999999999
Q ss_pred Ecc-CCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q psy775 443 VTP-LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 518 (1460)
Q Consensus 443 vpS-lrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~ 518 (1460)
+|| ..||||++.+||||| |.|+|+|..+|..+.+. .|++++|.|+++++++|..++..++++++...+..+
T Consensus 269 ~ps~~~e~~~~~l~EA~a~-----G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~ 343 (355)
T cd03819 269 SASTEPEAFGRTAVEAQAM-----GRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKAR 343 (355)
T ss_pred ecCCCCCCCchHHHHHHhc-----CCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 999 799999999999999 67789999888877774 389999999999999998888777777665555556
Q ss_pred HHHhhcC
Q psy775 519 KREKHMN 525 (1460)
Q Consensus 519 ~~v~~~~ 525 (1460)
+.+.++.
T Consensus 344 ~~~~~~f 350 (355)
T cd03819 344 MCVETLF 350 (355)
T ss_pred HHHHHhh
Confidence 6655444
No 56
>PRK14098 glycogen synthase; Provisional
Probab=99.76 E-value=6.3e-17 Score=199.63 Aligned_cols=336 Identities=13% Similarity=0.147 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhc--CcCceEEEEeeCC-----CCCccccccCccH-
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQ--NLKFKLGFFLHIP-----FPPWDIFRLFPWS- 617 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~--~~~~kigfFLHiP-----fP~~e~fr~lP~r- 617 (1460)
|+..+++.+.... ...|+|-.||||--++|.++++..... ..+.+..+..|.. ||....-..+|+.
T Consensus 127 f~~a~l~~~~~~~------~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~ 200 (489)
T PRK14098 127 FNVGVLETLQRLG------WKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEV 200 (489)
T ss_pred HHHHHHHHHHhcC------CCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHh
Confidence 6666666553211 123799999999999999998543211 2357888999974 1111100001110
Q ss_pred -----------HHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHh
Q psy775 618 -----------DEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQ 686 (1460)
Q Consensus 618 -----------~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~ 686 (1460)
.-+-.++..||.|---++.|++.-++....-.|++ -..+.+..++.++|+|||++.|.+...
T Consensus 201 ~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~-------~~l~~~~~kl~~I~NGID~~~~~p~~d 273 (489)
T PRK14098 201 CSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLD-------KVLEERKMRLHGILNGIDTRQWNPSTD 273 (489)
T ss_pred hhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChH-------HHHHhcCCCeeEEeCCccccccCCccc
Confidence 00111334444444444444333111000000000 000113567899999999998875321
Q ss_pred cCccccccchhhhccccccccc-h-hhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHH
Q psy775 687 AAPRVIDTKQKIVLGVDRLDYT-K-GLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFE 764 (1460)
Q Consensus 687 ~~~~~~~~~~~~~~g~~~~~~~-~-~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe 764 (1460)
. ... .+ .+++ +.. | ..-..+++++|++ ...++++|++|||+.+.||+..+++|+.
T Consensus 274 ~--~~~-~~----~~~~--~~~~k~~~k~~l~~~lgl~--------------~~~~~~~i~~vgRl~~~KG~d~li~a~~ 330 (489)
T PRK14098 274 K--LIK-KR----YSIE--RLDGKLENKKALLEEVGLP--------------FDEETPLVGVIINFDDFQGAELLAESLE 330 (489)
T ss_pred c--ccc-cc----CCcc--hhhhHHHHHHHHHHHhCCC--------------CccCCCEEEEeccccccCcHHHHHHHHH
Confidence 1 000 00 0000 000 0 0012344444432 1245789999999999999999999999
Q ss_pred HHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEEC
Q psy775 765 TLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVT 844 (1460)
Q Consensus 765 ~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvt 844 (1460)
++++. ++.|+.+|.+. + .+++++++++.+...+ +.+.+.++.+++..+|+.||++++|
T Consensus 331 ~l~~~------~~~lvivG~G~----~---~~~~~l~~l~~~~~~~---------V~~~g~~~~~~~~~~~a~aDi~l~P 388 (489)
T PRK14098 331 KLVEL------DIQLVICGSGD----K---EYEKRFQDFAEEHPEQ---------VSVQTEFTDAFFHLAIAGLDMLLMP 388 (489)
T ss_pred HHHhc------CcEEEEEeCCC----H---HHHHHHHHHHHHCCCC---------EEEEEecCHHHHHHHHHhCCEEEeC
Confidence 98752 35677777432 1 2456677776654322 5567788999999999999999999
Q ss_pred CCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCce
Q psy775 845 PLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGV 924 (1460)
Q Consensus 845 SlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 924 (1460)
|..||||++.+|||+| +.|+|++..+|..+.+
T Consensus 389 S~~E~~Gl~~lEAma~-----G~ppVv~~~GGl~d~v------------------------------------------- 420 (489)
T PRK14098 389 GKIESCGMLQMFAMSY-----GTIPVAYAGGGIVETI------------------------------------------- 420 (489)
T ss_pred CCCCCchHHHHHHHhC-----CCCeEEecCCCCceee-------------------------------------------
Confidence 9999999999999999 6788999998877611
Q ss_pred eEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCC---CHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 925 LIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTM---PEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 925 ~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
. ++.+ .-..+++++|.|++++|++|.+++.+ +...++...+. ....++++.-++++++-+++.
T Consensus 421 --~-~~~~---~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~---~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 421 --E-EVSE---DKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA---MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred --e-cCCC---CCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH---hcCCCChHHHHHHHHHHHHHH
Confidence 0 1110 01346899999999999999998743 22222222222 235677777777776665544
No 57
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.76 E-value=8e-17 Score=184.56 Aligned_cols=191 Identities=20% Similarity=0.304 Sum_probs=137.1
Q ss_pred EEEEEEeecccCchhhhhhhccch-hhh--ccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCC
Q psy775 311 TVRIRPLPIAIPYERFVQLAQAAP-RVI--DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSR 387 (1460)
Q Consensus 311 ~vkV~viPiGID~~~f~~~~~~~~-~~~--~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr 387 (1460)
..++.++|+|+|.+.+........ ... ..++++++++||+.+.||+..+++|+.++.+++|++ .++.+|....
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~~~~ 245 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGRRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDW----HLVIAGPDEG 245 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhhhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCe----EEEEECCCCc
Confidence 456789999999988754322111 111 156788999999999999999999999999888775 4666663321
Q ss_pred CChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCC
Q psy775 388 TDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPG 467 (1460)
Q Consensus 388 ~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~G 467 (1460)
.+.. .+..++.+.+ ..+.+.+.|.++.+++..+|+.||++++||..||||++++|||+| |.
T Consensus 246 ----~~~~---~~~~~~~~~~-------~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~-----G~ 306 (375)
T cd03821 246 ----GYRA---ELKQIAAALG-------LEDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALAC-----GT 306 (375)
T ss_pred ----chHH---HHHHHHHhcC-------ccceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhc-----CC
Confidence 1211 2222222222 223456679999999999999999999999999999999999999 67
Q ss_pred eEEEcCCCCchhcccc--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 468 VLIVSPFAGAGEQMHE--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 468 vlVlSe~aGaa~~L~~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|+|+|..+|..+.+.+ ++++ |.+.++++++|.++++++...+....++.....++++
T Consensus 307 PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 365 (375)
T cd03821 307 PVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRRALELPQRLKAMGENGRALVEERFS 365 (375)
T ss_pred CEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcC
Confidence 7899999888877753 5555 4566999999999999885544444444333345554
No 58
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.76 E-value=4e-17 Score=200.30 Aligned_cols=331 Identities=18% Similarity=0.196 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCC----ccccc--cCccH--
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPP----WDIFR--LFPWS-- 617 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~----~e~fr--~lP~r-- 617 (1460)
|+...++.++... ...|+|..||||-.++|.+++..... ...+..+..|-.... .+.+. .+|+.
T Consensus 114 f~~a~~~~~~~~~------~~~DiiH~hdw~~~~~~~~l~~~~~~--~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~ 185 (473)
T TIGR02095 114 FSRAAAELLSGLG------WQPDVVHAHDWHTALVPALLKAVYRP--NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYF 185 (473)
T ss_pred HHHHHHHHHHhcC------CCCCEEEECCcHHHHHHHHHHhhccC--CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHc
Confidence 6666666554311 12379999999999999988733211 036788888875211 11111 11110
Q ss_pred -----------HHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEE--ECCeEEEEEEeeCCCChhHHhHH
Q psy775 618 -----------DEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVE--HGGRTVRIRPLPIAIPYERFVQL 684 (1460)
Q Consensus 618 -----------~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~--~~Gr~v~V~v~PiGID~~~f~~~ 684 (1460)
.-+-.++..||.|-.-++.|++...+. ..|. .++ +..+..++.++|+|||++.|.+.
T Consensus 186 ~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~-------~l~~~l~~~~~ki~~I~NGid~~~~~p~ 255 (473)
T TIGR02095 186 HMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY-------GLDGVLKARSGKLRGILNGIDTEVWNPA 255 (473)
T ss_pred CchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc-------cchhHHHhcCCCeEEEeCCCCccccCCC
Confidence 001113334444444444443332210 0000 000 01134578899999999988653
Q ss_pred HhcCccccccchhhhccccccccc--hhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHH
Q psy775 685 AQAAPRVIDTKQKIVLGVDRLDYT--KGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKA 762 (1460)
Q Consensus 685 ~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~A 762 (1460)
... ....+ .+...+. ....+.+|+++|++ ...++++|+++||+.+.||+...++|
T Consensus 256 ~~~---~~~~~------~~~~~~~~k~~~k~~l~~~~gl~--------------~~~~~~~i~~vGrl~~~Kg~~~li~a 312 (473)
T TIGR02095 256 TDP---YLKAN------YSADDLAGKAENKEALQEELGLP--------------VDDDVPLFGVISRLTQQKGVDLLLAA 312 (473)
T ss_pred CCc---ccccC------cCccchhhhhhhHHHHHHHcCCC--------------ccCCCCEEEEEecCccccChHHHHHH
Confidence 111 00000 0000000 00113455555433 01367899999999999999999999
Q ss_pred HHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEE
Q psy775 763 FETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVAL 842 (1460)
Q Consensus 763 fe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~v 842 (1460)
++++.++. +.|+.+|.+. + .+++++++++.+.+.+ +.+.+..+.+++..+|+.||+++
T Consensus 313 ~~~l~~~~------~~lvi~G~g~----~---~~~~~l~~~~~~~~~~---------v~~~~~~~~~~~~~~~~~aDv~l 370 (473)
T TIGR02095 313 LPELLELG------GQLVVLGTGD----P---ELEEALRELAERYPGN---------VRVIIGYDEALAHLIYAGADFIL 370 (473)
T ss_pred HHHHHHcC------cEEEEECCCC----H---HHHHHHHHHHHHCCCc---------EEEEEcCCHHHHHHHHHhCCEEE
Confidence 99987642 4566666442 2 3456666666543322 33445678888899999999999
Q ss_pred ECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCC
Q psy775 843 VTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPP 922 (1460)
Q Consensus 843 vtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 922 (1460)
+||..||||++.+|||+| +.|+|+|..+|..+.+
T Consensus 371 ~pS~~E~~gl~~lEAma~-----G~pvI~s~~gg~~e~v----------------------------------------- 404 (473)
T TIGR02095 371 MPSRFEPCGLTQLYAMRY-----GTVPIVRRTGGLADTV----------------------------------------- 404 (473)
T ss_pred eCCCcCCcHHHHHHHHHC-----CCCeEEccCCCccceE-----------------------------------------
Confidence 999999999999999999 7899999999988721
Q ss_pred ceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCC----CHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHh
Q psy775 923 GVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTM----PEDERTLRMNYLRKREKVHDVNYWMRSFLKGMG 994 (1460)
Q Consensus 923 ~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m----~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 994 (1460)
.+.-.. ..-..+++++|.|++++|++|.+++.+ +...++...+. ....++++..++++++-++
T Consensus 405 ----~~~~~~--~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 405 ----VDGDPE--AESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNA---MSQDFSWDKSAKQYVELYR 471 (473)
T ss_pred ----ecCCCC--CCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH---hccCCCcHHHHHHHHHHHH
Confidence 110000 000346999999999999999999873 22222222222 2246787887777766554
No 59
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.76 E-value=5.8e-17 Score=198.84 Aligned_cols=335 Identities=17% Similarity=0.206 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcC-cCceEEEEeeCC-CCCc---cccc--cCccH-
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQN-LKFKLGFFLHIP-FPPW---DIFR--LFPWS- 617 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~-~~~kigfFLHiP-fP~~---e~fr--~lP~r- 617 (1460)
|+..+++.+.... ...|+|-.||||--+++.++++.. ..+ ...+..+..|.. +... +.+. .+|+.
T Consensus 104 f~~~~~~~~~~~~------~~pDiiH~h~w~~~~~~~~l~~~~-~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~ 176 (466)
T PRK00654 104 FSWAAAEFAEGLD------PRPDIVHAHDWHTGLIPALLKEKY-WRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEA 176 (466)
T ss_pred HHHHHHHHHHhcC------CCCceEEECCcHHHHHHHHHHHhh-hccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHH
Confidence 5566666554321 123799999999999999887442 111 246788999975 2110 0000 00100
Q ss_pred ------------HHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHH
Q psy775 618 ------------DEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLA 685 (1460)
Q Consensus 618 ------------~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~ 685 (1460)
.-+-.++..||.|---++.|++.-.+. ..|. .+.-.++.+..++.++|+|||++.|.+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~---~~~~-----gl~~~~~~~~~ki~vI~NGid~~~~~p~~ 248 (466)
T PRK00654 177 FHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTP---EFGY-----GLEGLLRARSGKLSGILNGIDYDIWNPET 248 (466)
T ss_pred cCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhccc---cCCc-----ChHHHHHhcccCceEecCCCCccccCCcc
Confidence 001112333333333333332221100 0000 00000112345789999999999886531
Q ss_pred hcCccccccchhhhccccccccch--hhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHH
Q psy775 686 QAAPRVIDTKQKIVLGVDRLDYTK--GLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAF 763 (1460)
Q Consensus 686 ~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Af 763 (1460)
.. ... . ..+..+.+. +..+.+|+++|++ ..+.++|++|||+.+.||+..+++|+
T Consensus 249 ~~--~~~-~------~~~~~~~~~k~~~k~~l~~~~gl~---------------~~~~~~i~~vGRl~~~KG~~~li~a~ 304 (466)
T PRK00654 249 DP--LLA-A------NYSADDLEGKAENKRALQERFGLP---------------DDDAPLFAMVSRLTEQKGLDLVLEAL 304 (466)
T ss_pred Cc--ccc-c------ccChhhhhchHHHHHHHHHHhCCC---------------CCCCcEEEEeeccccccChHHHHHHH
Confidence 10 000 0 000000000 0113445554432 13578999999999999999999999
Q ss_pred HHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEE
Q psy775 764 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALV 843 (1460)
Q Consensus 764 e~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vv 843 (1460)
++++++ + +.|+.+|.+. + .+++++++++.+.+.+ ++++.+. +.+....+|+.||++|+
T Consensus 305 ~~l~~~--~----~~lvivG~g~----~---~~~~~l~~l~~~~~~~--------v~~~~g~-~~~~~~~~~~~aDv~v~ 362 (466)
T PRK00654 305 PELLEQ--G----GQLVLLGTGD----P---ELEEAFRALAARYPGK--------VGVQIGY-DEALAHRIYAGADMFLM 362 (466)
T ss_pred HHHHhc--C----CEEEEEecCc----H---HHHHHHHHHHHHCCCc--------EEEEEeC-CHHHHHHHHhhCCEEEe
Confidence 998764 2 4566666432 1 2456677776655322 3445554 66667789999999999
Q ss_pred CCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCc
Q psy775 844 TPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPG 923 (1460)
Q Consensus 844 tSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 923 (1460)
||.+||||++.+|||+| +.|+|+|..+|..+.+. +.+
T Consensus 363 PS~~E~~gl~~lEAma~-----G~p~V~~~~gG~~e~v~-----~~~--------------------------------- 399 (466)
T PRK00654 363 PSRFEPCGLTQLYALRY-----GTLPIVRRTGGLADTVI-----DYN--------------------------------- 399 (466)
T ss_pred CCCCCCchHHHHHHHHC-----CCCEEEeCCCCccceee-----cCC---------------------------------
Confidence 99999999999999999 78999999999877211 000
Q ss_pred eeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCC---CHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 924 VLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTM---PEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 924 ~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
+.. .-..+++|+|.|+++++++|.++++. ++..++.+.+.+ ...++++.-+++.++-+.+.
T Consensus 400 -----~~~----~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 400 -----PED----GEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM---AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred -----CCC----CCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCChHHHHHHHHHHHHHH
Confidence 000 00346999999999999999999863 222222222222 25677777777776665544
No 60
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.75 E-value=1.6e-16 Score=190.98 Aligned_cols=265 Identities=14% Similarity=0.083 Sum_probs=170.3
Q ss_pred CCCEEEEeCcchhHHH-H-HHHhhhhccCCCceEEEEEecCCCCcccc-ccCC--CcHH----HHh-hhccCceeeeccH
Q psy775 211 GTPLVWIHDYHLMLAA-N-TIRNIADEQNLKFKLGFFLHIPFPPWDIF-RLFP--WSDE----ILQ-GMLGCDMVGFHIE 280 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP-~-~LR~~~p~~~~~~~IgfFlHiPFPs~eif-r~LP--~r~e----il~-gLL~aDlIgF~t~ 280 (1460)
..|+|++|...+...+ . .+.++. +.++.+..|--||..-.- ...+ .... +.+ .+-.+|.|...+.
T Consensus 106 ~~Div~~~~p~~~~~~~~~~~~~~~-----~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~ 180 (412)
T PRK10307 106 RPDRVIGVVPTLFCAPGARLLARLS-----GARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISR 180 (412)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHhh-----CCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCH
Confidence 4699999987654333 2 333322 356666666444421100 0000 0001 111 1224677777776
Q ss_pred HhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccc-hhhhc-----cCCeEEEEecCccccC
Q psy775 281 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA-PRVID-----TKQKIVLGVDRLDYTK 354 (1460)
Q Consensus 281 ~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~-~~~~~-----~~~kvIL~VgRLd~~K 354 (1460)
...+.+.+ .+....++.++|+|||.+.|.+..... ....+ .++++++++||+.+.|
T Consensus 181 ~~~~~~~~------------------~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 181 SMMNKARE------------------KGVAAEKVIFFPNWSEVARFQPVADADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHHHHH------------------cCCCcccEEEECCCcCHhhcCCCCccchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 65554432 122344688899999998886532211 11211 4568999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHH
Q psy775 355 GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASF 434 (1460)
Q Consensus 355 GI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aL 434 (1460)
|+..+++|++++ +++|+ +.|+++|. ++..+++ ++++.+.+ ...| .|.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG~-----g~~~~~l----~~~~~~~~-------l~~v-~f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICGQ-----GGGKARL----EKMAQCRG-------LPNV-HFLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEECC-----ChhHHHH----HHHHHHcC-------CCce-EEeCCCCHHHHHHH
Confidence 999999999876 45555 45666653 3333333 33333322 1234 45699999999999
Q ss_pred HHhccEEEEccCCCCCCcc----eeeeeeeccCCCCCeEEEcCCCCc--hhcc-cccEEECCCCHHHHHHHHHHHcCCCH
Q psy775 435 YRDAAVALVTPLRDGMNLV----AKEFVACQINEPPGVLIVSPFAGA--GEQM-HEALICNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 435 Y~aADV~VvpSlrEGfnLV----alEamAcq~~~~~GvlVlSe~aGa--a~~L-~~allVNP~D~~elA~AI~~aL~m~~ 507 (1460)
|++||++++||..|+++++ .+||||| |.|+|+|..+|. .+.+ ..|++++|.|++++|++|.++++++.
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~-----G~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLAS-----GRNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQAL 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHc-----CCCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCHH
Confidence 9999999999999997655 5899999 677799988774 3444 35999999999999999999998776
Q ss_pred HHHHHHHHHHHHHHhhcC
Q psy775 508 DERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 508 ~er~~R~~~l~~~v~~~~ 525 (1460)
...+++.++......+++
T Consensus 376 ~~~~~~~~a~~~~~~~fs 393 (412)
T PRK10307 376 LRPKLGTVAREYAERTLD 393 (412)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 666666555444445566
No 61
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.75 E-value=2.7e-17 Score=189.61 Aligned_cols=263 Identities=21% Similarity=0.225 Sum_probs=182.8
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCC--cccccc---CCCcHHHHhhhccCceeeeccHHhHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPP--WDIFRL---FPWSDEILQGMLGCDMVGFHIEDYCLN 285 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs--~eifr~---LP~r~eil~gLL~aDlIgF~t~~yar~ 285 (1460)
..|+||+|.+..... + . .+.++.+.+|-.+|. ++.+.. ...+..+...+..+|.+-+.+...+..
T Consensus 85 ~~Dii~~~~~~~~~~----~--~----~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~ 154 (365)
T cd03809 85 GLDLLHSPHNTAPLL----R--L----RGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRD 154 (365)
T ss_pred CCCeeeecccccCcc----c--C----CCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHH
Confidence 479999998887666 1 1 257888888854432 222211 112344555566788888888766665
Q ss_pred HHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhh-h-ccCCeEEEEecCccccCCHHHHHHHH
Q psy775 286 FVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRV-I-DTKQKIVLGVDRLDYTKGLVHRLKAF 363 (1460)
Q Consensus 286 FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~-~-~~~~kvIL~VgRLd~~KGI~~lL~Af 363 (1460)
+.+.. .....++.++|+|+|...+.......... . ..++++|+++||+.+.||+..+++|+
T Consensus 155 ~~~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~~ 217 (365)
T cd03809 155 LLRYL-----------------GVPPDKIVVIPLGVDPRFRPPPAEAEVLRALYLLPRPYFLYVGTIEPRKNLERLLEAF 217 (365)
T ss_pred HHHHh-----------------CcCHHHEEeeccccCccccCCCchHHHHHHhcCCCCCeEEEeCCCccccCHHHHHHHH
Confidence 55421 11234677899999988775432111011 1 15678999999999999999999999
Q ss_pred HHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEE
Q psy775 364 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALV 443 (1460)
Q Consensus 364 ~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vv 443 (1460)
..+.+++|+. .|+.+|...... ......+ .+. +....+.+.|.++.+++..+|+.||++++
T Consensus 218 ~~~~~~~~~~----~l~i~G~~~~~~----~~~~~~~----~~~-------~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ 278 (365)
T cd03809 218 ARLPAKGPDP----KLVIVGKRGWLN----EELLARL----REL-------GLGDRVRFLGYVSDEELAALYRGARAFVF 278 (365)
T ss_pred HHHHHhcCCC----CEEEecCCcccc----HHHHHHH----HHc-------CCCCeEEECCCCChhHHHHHHhhhhhhcc
Confidence 9999888754 466666433221 1122221 111 12345667799999999999999999999
Q ss_pred ccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Q psy775 444 TPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH-EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522 (1460)
Q Consensus 444 pSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~-~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~ 522 (1460)
||..||+|++++|||+| |.|+|+|+.+|..+.+. ++++++|.|.++++++|.++++.++...++..++ ++...
T Consensus 279 ps~~e~~~~~~~Ea~a~-----G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~-~~~~~ 352 (365)
T cd03809 279 PSLYEGFGLPVLEAMAC-----GTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLEDPALREELRERG-LARAK 352 (365)
T ss_pred cchhccCCCCHHHHhcC-----CCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHH
Confidence 99999999999999999 67779999887777664 4889999999999999999988666555544433 45666
Q ss_pred hcC
Q psy775 523 HMN 525 (1460)
Q Consensus 523 ~~~ 525 (1460)
+++
T Consensus 353 ~~s 355 (365)
T cd03809 353 RFS 355 (365)
T ss_pred hCC
Confidence 666
No 62
>PLN02949 transferase, transferring glycosyl groups
Probab=99.75 E-value=6.5e-17 Score=197.98 Aligned_cols=191 Identities=17% Similarity=0.198 Sum_probs=137.2
Q ss_pred EEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCC-CCChH
Q psy775 313 RIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS-RTDVK 391 (1460)
Q Consensus 313 kV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~ps-r~~~~ 391 (1460)
++.++++|+|.+.+...... ...++++++++||+.+.||+..+|+||+++.++.++-..++.|+++|... .++.+
T Consensus 244 ~i~vvyp~vd~~~~~~~~~~----~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~ 319 (463)
T PLN02949 244 RIKRVYPPCDTSGLQALPLE----RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEE 319 (463)
T ss_pred CeEEEcCCCCHHHcccCCcc----ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHH
Confidence 56788899998766321110 01345789999999999999999999999987654322345677777542 12222
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEE
Q psy775 392 EYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV 471 (1460)
Q Consensus 392 ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVl 471 (1460)
+.+++++++.+.+-. ..+.|.|+++.+++.++|+.||+++.||..||||++++||||| |.|+|+
T Consensus 320 ----~~~eL~~la~~l~L~-------~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~-----G~PVIa 383 (463)
T PLN02949 320 ----RLQKLKDRAKELGLD-------GDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAA-----GAVPIA 383 (463)
T ss_pred ----HHHHHHHHHHHcCCC-------CcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHc-----CCcEEE
Confidence 334444444443322 2245569999999999999999999999999999999999999 667899
Q ss_pred cCCCCchhcc-c----c--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 472 SPFAGAGEQM-H----E--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 472 Se~aGaa~~L-~----~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|..+|...++ . + |++++ |++++|++|.+++++++++++...+..++.+.+++
T Consensus 384 ~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS 442 (463)
T PLN02949 384 HNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFS 442 (463)
T ss_pred eCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC
Confidence 9988865333 2 2 67764 99999999999999876665444444455567776
No 63
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.75 E-value=7.5e-17 Score=194.52 Aligned_cols=262 Identities=14% Similarity=0.064 Sum_probs=177.9
Q ss_pred CCCEEEEeCcchhHHH-HHHHhhhhccCCCceEEEEEecC--CCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHH
Q psy775 211 GTPLVWIHDYHLMLAA-NTIRNIADEQNLKFKLGFFLHIP--FPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP-~~LR~~~p~~~~~~~IgfFlHiP--FPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL 287 (1460)
+.|+++.|-++-.... .+++++.. ..++...+|-. ++.......++.++.+ +-.+|.|-+.+....+.+.
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~----~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~ 199 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYL----RKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQ 199 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcC----CceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHH
Confidence 4677777765544333 34554332 33577777731 2211111222333333 3458999888887665544
Q ss_pred HHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHH
Q psy775 288 DCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLL 367 (1460)
Q Consensus 288 ~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL 367 (1460)
+. +.....++.++|+|++...+... ....+...++++||+.+.||+..+++|+.++.
T Consensus 200 ~~-----------------~~~~~~ki~vi~~gv~~~~~~~~------~~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~ 256 (407)
T cd04946 200 KR-----------------YPAYKEKIKVSYLGVSDPGIISK------PSKDDTLRIVSCSYLVPVKRVDLIIKALAALA 256 (407)
T ss_pred HH-----------------CCCccccEEEEECCcccccccCC------CCCCCCEEEEEeeccccccCHHHHHHHHHHHH
Confidence 31 12223466789999998765432 01145678999999999999999999999999
Q ss_pred HhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh--ccEEEEcc
Q psy775 368 EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD--AAVALVTP 445 (1460)
Q Consensus 368 ~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~a--ADV~VvpS 445 (1460)
+++|+. ++.++.+|. ++....+++. +.+.+ ..+.+.+.|.++++++.++|+. ||+++.||
T Consensus 257 ~~~p~~--~l~~~iiG~-----g~~~~~l~~~----~~~~~-------~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S 318 (407)
T cd04946 257 KARPSI--KIKWTHIGG-----GPLEDTLKEL----AESKP-------ENISVNFTGELSNSEVYKLYKENPVDVFVNLS 318 (407)
T ss_pred HhCCCc--eEEEEEEeC-----chHHHHHHHH----HHhcC-------CCceEEEecCCChHHHHHHHhhcCCCEEEeCC
Confidence 998876 366665553 2333333333 32211 1233556799999999999986 78999999
Q ss_pred CCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCC-CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 446 LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPY-EIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~-D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
..|||+++++||||| |.|+|+|..+|..+.+.+ |++++|. |++++|++|.++++++...++++.++.....
T Consensus 319 ~~Eg~p~~llEAma~-----G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~~~ 393 (407)
T cd04946 319 ESEGLPVSIMEAMSF-----GIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREKWE 393 (407)
T ss_pred ccccccHHHHHHHHc-----CCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 999999999999999 677899999999888854 6888764 8999999999999976666666655555555
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
.+++
T Consensus 394 ~~f~ 397 (407)
T cd04946 394 ENFN 397 (407)
T ss_pred HHcC
Confidence 5555
No 64
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.75 E-value=7.5e-17 Score=204.42 Aligned_cols=189 Identities=15% Similarity=0.106 Sum_probs=137.8
Q ss_pred eEEEEEEeecccCchhhhhhhccch---hhhc---cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEE
Q psy775 310 RTVRIRPLPIAIPYERFVQLAQAAP---RVID---TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIA 383 (1460)
Q Consensus 310 r~vkV~viPiGID~~~f~~~~~~~~---~~~~---~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig 383 (1460)
...+|.++|+|||.+.|.+...... .... .+.++|++|||+++.||+..+++||.++++++|++ .|+++|
T Consensus 480 ~~~kI~VI~NGVd~~~f~~~~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~----~LvIvG 555 (694)
T PRK15179 480 DERRIPVVYNGLAPLKSVQDDACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKV----RFIMVG 555 (694)
T ss_pred ChhHEEEECCCcCHHhcCCCchhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCe----EEEEEc
Confidence 3457889999999988753221111 1111 34678999999999999999999999999999875 366666
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccC
Q psy775 384 VPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQIN 463 (1460)
Q Consensus 384 ~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~ 463 (1460)
.+ +. ++++++++.+.+. ...+.|.|.. +++..+|+.||++|+||.+|||+++++|||||
T Consensus 556 ~G-----~~----~~~L~~l~~~lgL-------~~~V~flG~~--~dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~--- 614 (694)
T PRK15179 556 GG-----PL----LESVREFAQRLGM-------GERILFTGLS--RRVGYWLTQFNAFLLLSRFEGLPNVLIEAQFS--- 614 (694)
T ss_pred cC-----cc----hHHHHHHHHHcCC-------CCcEEEcCCc--chHHHHHHhcCEEEeccccccchHHHHHHHHc---
Confidence 42 22 2344444444332 2446677875 46889999999999999999999999999999
Q ss_pred CCCCeEEEcCCCCchhcccc---cEEECCCCH--HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 464 EPPGVLIVSPFAGAGEQMHE---ALICNPYEI--DAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 464 ~~~GvlVlSe~aGaa~~L~~---allVNP~D~--~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
+.|+|+|..+|..+.+.+ |++|+|.|. ++++++|.+++.........+.++......+++
T Consensus 615 --G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS 679 (694)
T PRK15179 615 --GVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWASARFS 679 (694)
T ss_pred --CCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCC
Confidence 677899999888888843 899998875 689999988887655444455444444445555
No 65
>PLN02316 synthase/transferase
Probab=99.75 E-value=1.8e-16 Score=205.11 Aligned_cols=334 Identities=13% Similarity=0.092 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhc-CcCceEEEEeeCC-CCCccccccCccHHHHHhh
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQ-NLKFKLGFFLHIP-FPPWDIFRLFPWSDEILQG 623 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~-~~~~kigfFLHiP-fP~~e~fr~lP~r~eIL~~ 623 (1460)
|+..+++.+... + ...|+|-.||||--++|.+++...... ....++.+..|-. |. ...+-.+
T Consensus 695 F~~Aale~l~~~---~---~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~~----------~n~lk~~ 758 (1036)
T PLN02316 695 FCHAALEFLLQS---G---FHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEFG----------ANHIGKA 758 (1036)
T ss_pred HHHHHHHHHHhc---C---CCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcccc----------hhHHHHH
Confidence 566666654322 1 234899999999999999887543211 2346788888853 21 1123356
Q ss_pred cccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhcccc
Q psy775 624 MLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVD 703 (1460)
Q Consensus 624 LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~ 703 (1460)
+..||.|---++.|++..+.. . ....+..++.++|+|||++.|.+......... .+
T Consensus 759 l~~AD~ViTVS~tya~EI~~~-----------~----~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~---------y~ 814 (1036)
T PLN02316 759 MAYADKATTVSPTYSREVSGN-----------S----AIAPHLYKFHGILNGIDPDIWDPYNDNFIPVP---------YT 814 (1036)
T ss_pred HHHCCEEEeCCHHHHHHHHhc-----------c----CcccccCCEEEEECCccccccCCccccccccc---------CC
Confidence 678898887788777664431 0 01123457889999999988865321100000 00
Q ss_pred ccccc--hh-hHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEE
Q psy775 704 RLDYT--KG-LIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLL 780 (1460)
Q Consensus 704 ~~~~~--~~-~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLv 780 (1460)
..+.. |. ..+.+|+++|++ ..+.++|++||||.+.||+..+++|+.++++.. +.||
T Consensus 815 ~~~~~~gK~~~k~~Lr~~lGL~---------------~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~------~qlV 873 (1036)
T PLN02316 815 SENVVEGKRAAKEALQQRLGLK---------------QADLPLVGIITRLTHQKGIHLIKHAIWRTLERN------GQVV 873 (1036)
T ss_pred chhhhhhhhhhHHHHHHHhCCC---------------cccCeEEEEEeccccccCHHHHHHHHHHHhhcC------cEEE
Confidence 00000 00 013455555543 135789999999999999999999999998632 4566
Q ss_pred EEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeee
Q psy775 781 QIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 860 (1460)
Q Consensus 781 qi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc 860 (1460)
.+|.+. + ..+++++.+++.+++..+. ..+.|.+..+......+|++||+||+||..|||||+.+|||+|
T Consensus 874 IvG~Gp--d----~~~e~~l~~La~~Lg~~~~-----~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~ 942 (1036)
T PLN02316 874 LLGSAP--D----PRIQNDFVNLANQLHSSHH-----DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY 942 (1036)
T ss_pred EEeCCC--C----HHHHHHHHHHHHHhCccCC-----CeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc
Confidence 566432 1 1456778888887765432 1244555555544457999999999999999999999999999
Q ss_pred ccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccce
Q psy775 861 QINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEA 940 (1460)
Q Consensus 861 ~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~a 940 (1460)
+.|+|+|..+|..++. .+.+.+.... +..| ....+
T Consensus 943 -----GtppVvs~vGGL~DtV------~d~d~~~~~~-------------------------------~~~g---~~~tG 977 (1036)
T PLN02316 943 -----GSIPVVRKTGGLFDTV------FDVDHDKERA-------------------------------QAQG---LEPNG 977 (1036)
T ss_pred -----CCCeEEEcCCCcHhhc------cccccccccc-------------------------------cccc---cCCce
Confidence 6789999999988822 1111000000 0011 01357
Q ss_pred EEeCCCCHHHHHHHHHHHhCCCHHHHHH-HHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 941 LICNPYEIDAAAEVIHRALTMPEDERTL-RMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 941 llVnP~d~~~iA~ai~~aL~m~~~er~~-r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
++++|.|+++++++|.+||......+.. +..........+++..-+++.++-+..+
T Consensus 978 flf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 978 FSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred EEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999874333332 2222222235578888777776655443
No 66
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.74 E-value=1.6e-16 Score=190.26 Aligned_cols=185 Identities=16% Similarity=0.197 Sum_probs=132.1
Q ss_pred CCCEEEEEEcC-ccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy775 739 TKQKIVLGVDR-LDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 817 (1460)
Q Consensus 739 ~~kkiIl~VdR-Ld~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~ 817 (1460)
.++++|+++|| +.+.||+...++|+.++.+++|++ .|+.+|......+..........+++.++++.+.+.
T Consensus 209 ~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~----~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---- 280 (396)
T cd03818 209 PGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDA----RVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDL---- 280 (396)
T ss_pred CCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCc----EEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCc----
Confidence 56789999998 999999999999999999888875 577777532111000000001112223333332211
Q ss_pred cEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 818 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 818 pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
+.+.|.|.++++++.++|+.||++++||..||+|++.+||||| +.|+|+|..+|..+.+
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~-----G~PVIas~~~g~~e~i---------------- 339 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC-----GCLVVGSDTAPVREVI---------------- 339 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC-----CCCEEEcCCCCchhhc----------------
Confidence 2366789999999999999999999999999999999999999 7899999988876611
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 977 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v 977 (1460)
.++ ..+++++|.|++++|++|.++++++...++++.+ .++++
T Consensus 340 -----------------------------~~~--------~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~-ar~~~ 381 (396)
T cd03818 340 -----------------------------TDG--------ENGLLVDFFDPDALAAAVIELLDDPARRARLRRA-ARRTA 381 (396)
T ss_pred -----------------------------ccC--------CceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHH-HHHHH
Confidence 111 3468999999999999999999887554554444 45555
Q ss_pred Hh-cCHHHHHHHHH
Q psy775 978 KV-HDVNYWMRSFL 990 (1460)
Q Consensus 978 ~~-~~~~~W~~~~l 990 (1460)
.+ +++...+++++
T Consensus 382 ~~~fs~~~~~~~~~ 395 (396)
T cd03818 382 LRYDLLSVCLPRQL 395 (396)
T ss_pred HHhccHHHHHHHHh
Confidence 55 66655555543
No 67
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.74 E-value=2.8e-16 Score=178.00 Aligned_cols=268 Identities=23% Similarity=0.220 Sum_probs=187.1
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccc----cCCCcHHHHhhhccCceeeeccHHhHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR----LFPWSDEILQGMLGCDMVGFHIEDYCLNF 286 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr----~LP~r~eil~gLL~aDlIgF~t~~yar~F 286 (1460)
..|+|++|+++...+...+.+ ..+.++.+.+|-+++...... ...........+..+|.+-+.+......+
T Consensus 85 ~~Dii~~~~~~~~~~~~~~~~-----~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 159 (374)
T cd03801 85 RFDVVHAHDWLALLAAALAAR-----LLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREEL 159 (374)
T ss_pred CCcEEEEechhHHHHHHHHHH-----hcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHH
Confidence 479999999998887763332 236889999998887543221 11112222333344677777776655554
Q ss_pred HHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh--ccCCeEEEEecCccccCCHHHHHHHHH
Q psy775 287 VDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI--DTKQKIVLGVDRLDYTKGLVHRLKAFE 364 (1460)
Q Consensus 287 L~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~--~~~~kvIL~VgRLd~~KGI~~lL~Af~ 364 (1460)
.+. +.....++.++|+|+|...+........... ..+++.++++||+.+.||+..+++|+.
T Consensus 160 ~~~-----------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~ 222 (374)
T cd03801 160 REL-----------------GGVPPEKITVIPNGVDTERFRPAPRAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALA 222 (374)
T ss_pred Hhc-----------------CCCCCCcEEEecCcccccccCccchHHHhhcCCcCCCeEEEEecchhhhcCHHHHHHHHH
Confidence 441 1111247788999999887753210000001 145678999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEc
Q psy775 365 TLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVT 444 (1460)
Q Consensus 365 ~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vvp 444 (1460)
.+.+++|+ +.++.+| +++....+++.+ .+.+. .+.+.+.|.++.+++..+|+.||++++|
T Consensus 223 ~~~~~~~~----~~l~i~G-----~~~~~~~~~~~~----~~~~~-------~~~v~~~g~~~~~~~~~~~~~~di~i~~ 282 (374)
T cd03801 223 KLRKEYPD----VRLVIVG-----DGPLREELEALA----AELGL-------GDRVTFLGFVPDEDLPALYAAADVFVLP 282 (374)
T ss_pred HHhhhcCC----eEEEEEe-----CcHHHHHHHHHH----HHhCC-------CcceEEEeccChhhHHHHHHhcCEEEec
Confidence 99888765 4466666 222333333332 22221 2234556999999999999999999999
Q ss_pred cCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 445 PLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 445 SlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
|..||+|++++|||+| |.|+|++..+|..+.+. .|+++++.|+++++++|.++++.+...++...++.....
T Consensus 283 ~~~~~~~~~~~Ea~~~-----g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 357 (374)
T cd03801 283 SLYEGFGLVLLEAMAA-----GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVA 357 (374)
T ss_pred chhccccchHHHHHHc-----CCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 9999999999999999 67789999988888875 389999999999999999999987766666655554555
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
..++
T Consensus 358 ~~~~ 361 (374)
T cd03801 358 ERFS 361 (374)
T ss_pred HhcC
Confidence 5555
No 68
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.74 E-value=2.6e-16 Score=182.06 Aligned_cols=260 Identities=20% Similarity=0.196 Sum_probs=181.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|++|..+...+..++..+.. ..+..+.+|-+-. +.... ...+...+-.+|.+-..+....+.+.+.
T Consensus 79 ~~Dii~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~vi~~s~~~~~~l~~~- 148 (355)
T cd03799 79 GIDHIHAHFGTTPATVAMLASRLG----GIPYSFTAHGKDI----FRSPD-AIDLDEKLARADFVVAISEYNRQQLIRL- 148 (355)
T ss_pred CCCEEEECCCCchHHHHHHHHHhc----CCCEEEEEecccc----cccCc-hHHHHHHHhhCCEEEECCHHHHHHHHHh-
Confidence 479999997765555555554432 4677777774321 11111 1234444556899988888776665541
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhC
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 370 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~ 370 (1460)
++....++.++|+|+|.+.+.... .....++..|+++||+.+.||+..+++|++++.++.
T Consensus 149 ----------------~~~~~~~~~vi~~~~d~~~~~~~~----~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~ 208 (355)
T cd03799 149 ----------------LGCDPDKIHVVHCGVDLERFPPRP----PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKDRG 208 (355)
T ss_pred ----------------cCCCcccEEEEeCCcCHHHcCCcc----ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcC
Confidence 112335778899999998876432 011145678999999999999999999999988776
Q ss_pred CCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCC---
Q psy775 371 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR--- 447 (1460)
Q Consensus 371 P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlr--- 447 (1460)
|+ +.++.+|... ...++ .+.+.+.+ ..+.+.+.|.++.+++..+|+.||+++.||..
T Consensus 209 ~~----~~l~i~G~~~-----~~~~~----~~~~~~~~-------~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~ 268 (355)
T cd03799 209 ID----FRLDIVGDGP-----LRDEL----EALIAELG-------LEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAAD 268 (355)
T ss_pred CC----eEEEEEECCc-----cHHHH----HHHHHHcC-------CCCeEEECCcCChHHHHHHHHhCCEEEecceecCC
Confidence 65 4566666322 11223 33333322 23446678999999999999999999999999
Q ss_pred ---CCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 448 ---DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 448 ---EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
||||++.+|||+| |.|+|+|..+|..+.+. .|++++|.|+++++++|.++++++...++++.++.....
T Consensus 269 ~~~e~~~~~~~Ea~a~-----G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~ 343 (355)
T cd03799 269 GDREGLPVVLMEAMAM-----GLPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPELRREMGEAGRARVE 343 (355)
T ss_pred CCccCccHHHHHHHHc-----CCCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 9999999999999 67789999877776664 389999999999999999999987665554444433333
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
.+++
T Consensus 344 ~~~s 347 (355)
T cd03799 344 EEFD 347 (355)
T ss_pred HhcC
Confidence 4444
No 69
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.74 E-value=2.6e-16 Score=179.63 Aligned_cols=265 Identities=17% Similarity=0.147 Sum_probs=172.9
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCC-CcHHHHhhh-ccCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFP-WSDEILQGM-LGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP-~r~eil~gL-L~aDlIgF~t~~yar~FL~ 288 (1460)
..|+|.+|+++............. ..++.+..|--++... ...+ ....+..-+ -.+|.+-..+......+.+
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAG----VPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcC----CCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 479999999997777666654322 5678888886554422 0111 111111111 1345554444433332222
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc-----cCCeEEEEecCccccCCHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID-----TKQKIVLGVDRLDYTKGLVHRLKAF 363 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~-----~~~kvIL~VgRLd~~KGI~~lL~Af 363 (1460)
++-...++.++|+|+|...+..........++ .++++++++||+.+.||+..+++|+
T Consensus 154 ------------------~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 154 ------------------IGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred ------------------cCCChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 11122456789999998877543322222211 4567899999999999999999999
Q ss_pred HHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEE
Q psy775 364 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALV 443 (1460)
Q Consensus 364 ~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vv 443 (1460)
..+.+++|++ .++.+|.+.. ....+.... .+. +..+.+.+.|. .+++..+|+.||++++
T Consensus 216 ~~l~~~~~~~----~l~i~G~~~~-----~~~~~~~~~---~~~-------~~~~~v~~~g~--~~~~~~~~~~adi~v~ 274 (365)
T cd03807 216 ALLLKKFPNA----RLLLVGDGPD-----RANLELLAL---KEL-------GLEDKVILLGE--RSDVPALLNALDVFVL 274 (365)
T ss_pred HHHHHhCCCe----EEEEecCCcc-----hhHHHHHHH---Hhc-------CCCceEEEccc--cccHHHHHHhCCEEEe
Confidence 9998887764 4665654321 111211111 011 12233445563 5678999999999999
Q ss_pred ccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc-cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Q psy775 444 TPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522 (1460)
Q Consensus 444 pSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~-allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~ 522 (1460)
||..||+|++++|||+| |.|+|+|..+|..+.+.+ |+++++.|+++++++|.+++++++..++...++......
T Consensus 275 ps~~e~~~~~~~Ea~a~-----g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 349 (365)
T cd03807 275 SSLSEGFPNVLLEAMAC-----GLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEE 349 (365)
T ss_pred CCccccCCcHHHHHHhc-----CCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 99999999999999999 677899999888887765 999999999999999999999875555554444444444
Q ss_pred hcC
Q psy775 523 HMN 525 (1460)
Q Consensus 523 ~~~ 525 (1460)
.++
T Consensus 350 ~~s 352 (365)
T cd03807 350 NFS 352 (365)
T ss_pred hCC
Confidence 455
No 70
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.74 E-value=8.8e-17 Score=195.67 Aligned_cols=183 Identities=14% Similarity=0.227 Sum_probs=131.7
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHH--HhCCCCCCCEEEEEEEcCCCCChhHH----HHHHHHHHHHHHHHhccCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLL--EKHPEHLEKVTLLQIAVPSRTDVKEY----QDLKEEMDQLVGRINGRFT 812 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL--~~~P~~~~kVvLvqi~~psr~~~~~y----~~l~~el~~lv~~IN~~~~ 812 (1460)
.++++|++|||+++.||+..+++||.++. ++.| ++++ .+|.+ .+.+.+ .++.+++..++++++
T Consensus 246 ~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~----~l~l-i~G~g--~~~~~l~~~~~~~~~~~~~~~~~~~---- 314 (439)
T TIGR02472 246 PEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA----NLVL-VLGCR--DDIRKMESQQREVLQKVLLLIDRYD---- 314 (439)
T ss_pred cCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc----cEEE-EeCCc--cccccccHHHHHHHHHHHHHHHHcC----
Confidence 46789999999999999999999998642 2223 2332 23322 111112 123334445555432
Q ss_pred CCCCccEEEEcCCCCHHHHHHHHHHc----cEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcC
Q psy775 813 TPNWSPIRYIYGCISQDELASFYRDA----AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICN 888 (1460)
Q Consensus 813 ~~~~~pvv~~~g~v~~eel~Aly~~A----Dv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vn 888 (1460)
+...+.|.|.++.+++.++|+.| |+||.||.+|||+++++||||| +.|+|+|..+|..+++.
T Consensus 315 ---l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~-----G~PvV~s~~gg~~eiv~------ 380 (439)
T TIGR02472 315 ---LYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC-----GLPIVATDDGGPRDIIA------ 380 (439)
T ss_pred ---CCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh-----CCCEEEeCCCCcHHHhc------
Confidence 23347788999999999999988 9999999999999999999999 78999999998777211
Q ss_pred cccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHH
Q psy775 889 PYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTL 968 (1460)
Q Consensus 889 P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~ 968 (1460)
+ -.++++|+|.|++++|++|.++++++...+++
T Consensus 381 ---------------------------------------~--------~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~ 413 (439)
T TIGR02472 381 ---------------------------------------N--------CRNGLLVDVLDLEAIASALEDALSDSSQWQLW 413 (439)
T ss_pred ---------------------------------------C--------CCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 1 13568999999999999999999876655555
Q ss_pred HHHHHHhHHHhcCHHHHHHHHHHHH
Q psy775 969 RMNYLRKREKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 969 r~~~~~~~v~~~~~~~W~~~~l~~l 993 (1460)
..++.......++++.-++++++-|
T Consensus 414 ~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 414 SRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 5554444456778888777776544
No 71
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.74 E-value=2.1e-16 Score=182.23 Aligned_cols=269 Identities=19% Similarity=0.170 Sum_probs=173.8
Q ss_pred CCCEEEEeCc-chh--HHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHH
Q psy775 211 GTPLVWIHDY-HLM--LAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 211 ~gDvVwIHDY-hL~--llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL 287 (1460)
..|+|.+|+. .++ .....+.... ...+.++.+.+|-+.|....+. .....-.-+-.+|.|-+.+.+.++++.
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~~~~~ 150 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLL--RGLGIPVVVTLHTVLLHEPRPG---DRALLRLLLRRADAVIVMSSELLRALL 150 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHH--hhcCCCEEEEEecCCccccchh---hhHHHHHHHhcCCEEEEeeHHHHHHHH
Confidence 4689999872 221 1111111110 1246899999998622221111 111222233458888888755555554
Q ss_pred HHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc-cCCeEEEEecCccccCCHHHHHHHHHHH
Q psy775 288 DCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID-TKQKIVLGVDRLDYTKGLVHRLKAFETL 366 (1460)
Q Consensus 288 ~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~-~~~kvIL~VgRLd~~KGI~~lL~Af~~l 366 (1460)
... ...++.++|+|+|...+...... ..... .++++++++||+.+.||+..+++|++++
T Consensus 151 ~~~-------------------~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~G~~~~~K~~~~ll~a~~~~ 210 (366)
T cd03822 151 LRA-------------------YPEKIAVIPHGVPDPPAEPPESL-KALGGLDGRPVLLTFGLLRPYKGLELLLEALPLL 210 (366)
T ss_pred hhc-------------------CCCcEEEeCCCCcCcccCCchhh-HhhcCCCCCeEEEEEeeccCCCCHHHHHHHHHHH
Confidence 410 03467889999998766543221 11111 5678899999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC
Q psy775 367 LEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL 446 (1460)
Q Consensus 367 L~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl 446 (1460)
.+++|++ .|+.+|...... . .......+++.+.+.. ..|.+..+.++.+++..+|+.||++++||.
T Consensus 211 ~~~~~~~----~l~i~G~~~~~~-~---~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~ 276 (366)
T cd03822 211 VAKHPDV----RLLVAGETHPDL-E---RYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAADVVVLPYR 276 (366)
T ss_pred HhhCCCe----EEEEeccCccch-h---hhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcCEEEeccc
Confidence 9887765 466666432111 1 1111100222222211 124444344999999999999999999999
Q ss_pred CC--CCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 447 RD--GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 447 rE--GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
.| |++++++||||| |.|+|+|..+| .+++. .|++++|.|+++++++|.++++++....+++ +..++.+
T Consensus 277 ~e~~~~~~~~~Ea~a~-----G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~~~~~~-~~~~~~~ 349 (366)
T cd03822 277 SADQTQSGVLAYAIGF-----GKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPELAQALR-ARAREYA 349 (366)
T ss_pred ccccccchHHHHHHHc-----CCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHHHHHHH-HHHHHHH
Confidence 99 999999999999 67779999888 66663 3899999999999999999999766555544 4445555
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
.+++
T Consensus 350 ~~~s 353 (366)
T cd03822 350 RAMS 353 (366)
T ss_pred hhCC
Confidence 5555
No 72
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.74 E-value=6.8e-16 Score=175.93 Aligned_cols=265 Identities=21% Similarity=0.208 Sum_probs=182.4
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
.-|+|++|......+...+..+. .+.++.+..|-+++....... ..+......+-.+|.+-+.+......+.+..
T Consensus 93 ~~dii~~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 93 RPDLIHAHFAYPDGFAAALLKRK----LGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred CCCEEEEeccchHHHHHHHHHHh----cCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 47999999555444433332221 246788888876654332221 2233444455568999998887766665410
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchh-hhc-cCCeEEEEecCccccCCHHHHHHHHHHHHH
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPR-VID-TKQKIVLGVDRLDYTKGLVHRLKAFETLLE 368 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~-~~~-~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~ 368 (1460)
....++.++|+|+|.+.+.+....... ... .+++.++++||+.+.||+..+++|+..+.+
T Consensus 168 ------------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~ 229 (377)
T cd03798 168 ------------------IDPEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLK 229 (377)
T ss_pred ------------------CCCCceEEcCCCcCcccCCCcchHHHHhccCCCCceEEEEeccCccccCHHHHHHHHHHHHh
Confidence 123467789999998877643221110 111 467889999999999999999999999988
Q ss_pred hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCC
Q psy775 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD 448 (1460)
Q Consensus 369 ~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrE 448 (1460)
++|+. .++.+|.+ +....+++.++ +. +..+.+.+.|.++++++..+|+.||+++.||..|
T Consensus 230 ~~~~~----~l~i~g~~-----~~~~~~~~~~~----~~-------~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~ 289 (377)
T cd03798 230 KRPDV----HLVIVGDG-----PLREALEALAA----EL-------GLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLRE 289 (377)
T ss_pred cCCCe----EEEEEcCC-----cchHHHHHHHH----hc-------CCcceEEEeCCCCHHHHHHHHHhcCeeecchhhc
Confidence 76654 45555532 22222332222 22 2234456679999999999999999999999999
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|+|++++|||+| |.|+|+|+.+|..+.+.. |++++|.|+++++++|.++++++.. +...+........++
T Consensus 290 ~~~~~~~Ea~~~-----G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s 362 (377)
T cd03798 290 GFGLVLLEAMAC-----GLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL--RLGRAARRRVAERFS 362 (377)
T ss_pred cCChHHHHHHhc-----CCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH--HHhHHHHHHHHHHhh
Confidence 999999999999 677899998888777743 6899999999999999999998765 333344444444444
No 73
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.74 E-value=1.7e-16 Score=204.66 Aligned_cols=190 Identities=15% Similarity=0.153 Sum_probs=143.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHH----HHHHHHHHHHHHHHhccCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEY----QDLKEEMDQLVGRINGRFTTP 814 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y----~~l~~el~~lv~~IN~~~~~~ 814 (1460)
+++++|++|||+++.||+..+|+||..+.+..+.. ++++ .+|... +.++. .....++.+++.+.+-
T Consensus 477 pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li~~lgL----- 546 (1050)
T TIGR02468 477 PRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLIDKYDL----- 546 (1050)
T ss_pred CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHHHHhCC-----
Confidence 57789999999999999999999999986543321 2333 344321 11111 1234456666655443
Q ss_pred CCccEEEEcCCCCHHHHHHHHHHc----cEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcc
Q psy775 815 NWSPIRYIYGCISQDELASFYRDA----AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY 890 (1460)
Q Consensus 815 ~~~pvv~~~g~v~~eel~Aly~~A----Dv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~ 890 (1460)
...+.|.|.++++++.++|+.| ||||.||.+||||++++||||| +.|+|+|..+|..+.+
T Consensus 547 --~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAc-----GlPVVASdvGG~~EII--------- 610 (1050)
T TIGR02468 547 --YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPMVATKNGGPVDIH--------- 610 (1050)
T ss_pred --CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHh-----CCCEEEeCCCCcHHHh---------
Confidence 2347788999999999999998 6999999999999999999999 7899999998877611
Q ss_pred cchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHH
Q psy775 891 EIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRM 970 (1460)
Q Consensus 891 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~ 970 (1460)
.++ .++++|+|.|++++|++|.++|+.+...++.+.
T Consensus 611 ------------------------------------~~g--------~nGlLVdP~D~eaLA~AL~~LL~Dpelr~~m~~ 646 (1050)
T TIGR02468 611 ------------------------------------RVL--------DNGLLVDPHDQQAIADALLKLVADKQLWAECRQ 646 (1050)
T ss_pred ------------------------------------ccC--------CcEEEECCCCHHHHHHHHHHHhhCHHHHHHHHH
Confidence 111 356999999999999999999987665555555
Q ss_pred HHHHhHHHhcCHHHHHHHHHHHHhhhhhc
Q psy775 971 NYLRKREKVHDVNYWMRSFLKGMGTLITE 999 (1460)
Q Consensus 971 ~~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 999 (1460)
++ ++.+..+++...++++++.+......
T Consensus 647 ~g-r~~v~~FSWe~ia~~yl~~i~~~~~~ 674 (1050)
T TIGR02468 647 NG-LKNIHLFSWPEHCKTYLSRIASCRPR 674 (1050)
T ss_pred HH-HHHHHHCCHHHHHHHHHHHHHHHhcc
Confidence 54 56678899999999999888876643
No 74
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.73 E-value=1.9e-16 Score=193.50 Aligned_cols=165 Identities=11% Similarity=0.091 Sum_probs=125.0
Q ss_pred eEEEEEEeecccCchhhhhhhccchhh----hc---cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q psy775 310 RTVRIRPLPIAIPYERFVQLAQAAPRV----ID---TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQI 382 (1460)
Q Consensus 310 r~vkV~viPiGID~~~f~~~~~~~~~~----~~---~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqi 382 (1460)
...++.++|+|||++.|.+........ .. .+.++|.+|+|+.+.||...+|+|+.++++++|++ .|+++
T Consensus 360 p~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdi----rLvIV 435 (578)
T PRK15490 360 EAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPAT----RFVLV 435 (578)
T ss_pred CHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCe----EEEEE
Confidence 345788999999998887643211111 11 34568899999999999999999999999988875 46666
Q ss_pred EcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeecc
Q psy775 383 AVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQI 462 (1460)
Q Consensus 383 g~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~ 462 (1460)
|. ++.. +++++++.+.+. ..-+.|.|. .+++..+|+.||+||+||.+||||++++|||||
T Consensus 436 Gd-----G~~~----eeLk~la~elgL-------~d~V~FlG~--~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~-- 495 (578)
T PRK15490 436 GD-----GDLR----AEAQKRAEQLGI-------LERILFVGA--SRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMV-- 495 (578)
T ss_pred eC-----chhH----HHHHHHHHHcCC-------CCcEEECCC--hhhHHHHHHhCCEEEEcccccCccHHHHHHHHh--
Confidence 63 3322 344444444332 233556676 568899999999999999999999999999999
Q ss_pred CCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHH
Q psy775 463 NEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHR 501 (1460)
Q Consensus 463 ~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~ 501 (1460)
|.|+|+|..+|..+.+. .|++|+|.|++++++++..
T Consensus 496 ---GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~l 534 (578)
T PRK15490 496 ---GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRY 534 (578)
T ss_pred ---CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHH
Confidence 67789999998888774 3999999999999888744
No 75
>PRK14099 glycogen synthase; Provisional
Probab=99.73 E-value=2e-16 Score=195.09 Aligned_cols=343 Identities=16% Similarity=0.140 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC-CCC---ccccc--cCccHHH
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP-FPP---WDIFR--LFPWSDE 619 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP-fP~---~e~fr--~lP~r~e 619 (1460)
|+.++++.+.....+ ...|+|-.||||--++|.+++. ......+..+..|.- |.. ...+. .++...-
T Consensus 117 f~~a~~~~~~~~~~~----~~pDIiH~Hdw~~~l~~~~l~~---~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~ 189 (485)
T PRK14099 117 LARAAAAIGQGLVPG----FVPDIVHAHDWQAGLAPAYLHY---SGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAF 189 (485)
T ss_pred HHHHHHHHHhhhccC----CCCCEEEECCcHHHHHHHHHHh---CCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHc
Confidence 666666654322111 1238999999999999988862 122446788899963 211 00000 0110000
Q ss_pred HHhhcccCceeecccHhHHHHHHHHHHHHhCc-eeeCCCcEEEEC---------CeEEEEEEeeCCCChhHHhHHHhcCc
Q psy775 620 ILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGC-RVDRKNLLVEHG---------GRTVRIRPLPIAIPYERFVQLAQAAP 689 (1460)
Q Consensus 620 IL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~-~~~~~~~~i~~~---------Gr~v~V~v~PiGID~~~f~~~~~~~~ 689 (1460)
-..++... ..-.+.+..+..|++++.. +.....+.-.+. -+..++.++|+|||++.|.+.....
T Consensus 190 ~~~~~~~~-----~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~- 263 (485)
T PRK14099 190 SLDGVEYY-----GGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDEL- 263 (485)
T ss_pred CchhhhhC-----CCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccch-
Confidence 00000000 0112234444444444321 111111100111 1356789999999999887532210
Q ss_pred cccccchhhhccccccccc-hh-hHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHH
Q psy775 690 RVIDTKQKIVLGVDRLDYT-KG-LIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLL 767 (1460)
Q Consensus 690 ~~~~~~~~~~~g~~~~~~~-~~-~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL 767 (1460)
.. .+ .+..+.. |. ..+.+|+++|++ ...+..++++|||+.+.||+..+++|+.+++
T Consensus 264 -~~-~~------~~~~~~~~k~~~k~~l~~~~gl~--------------~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~ 321 (485)
T PRK14099 264 -IA-AT------YDVETLAARAANKAALQARFGLD--------------PDPDALLLGVISRLSWQKGLDLLLEALPTLL 321 (485)
T ss_pred -hh-hc------CChhHHHhHHHhHHHHHHHcCCC--------------cccCCcEEEEEecCCccccHHHHHHHHHHHH
Confidence 00 00 0000000 00 013445555433 0124578889999999999999999999987
Q ss_pred HhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHH-HccEEEECCC
Q psy775 768 EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR-DAAVALVTPL 846 (1460)
Q Consensus 768 ~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~-~ADv~vvtSl 846 (1460)
++ + +.|+.+|.+. + .+++++++++.+... .++++.|. .+++..+|. .||+||+||.
T Consensus 322 ~~--~----~~lvivG~G~----~---~~~~~l~~l~~~~~~--------~v~~~~G~--~~~l~~~~~a~aDifv~PS~ 378 (485)
T PRK14099 322 GE--G----AQLALLGSGD----A---ELEARFRAAAQAYPG--------QIGVVIGY--DEALAHLIQAGADALLVPSR 378 (485)
T ss_pred hc--C----cEEEEEecCC----H---HHHHHHHHHHHHCCC--------CEEEEeCC--CHHHHHHHHhcCCEEEECCc
Confidence 53 2 4566666532 1 345566666554321 24456665 678888774 6999999999
Q ss_pred ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeE
Q psy775 847 RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLI 926 (1460)
Q Consensus 847 rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i 926 (1460)
+||||++.+|||+| +.|+|+|..+|..+.+ .+.+ +.
T Consensus 379 ~E~fGl~~lEAma~-----G~ppVvs~~GGl~d~V------~~~~--~~------------------------------- 414 (485)
T PRK14099 379 FEPCGLTQLCALRY-----GAVPVVARVGGLADTV------VDAN--EM------------------------------- 414 (485)
T ss_pred cCCCcHHHHHHHHC-----CCCcEEeCCCCcccee------eccc--cc-------------------------------
Confidence 99999999999999 6688889998887711 0100 00
Q ss_pred eccccCCcccccceEEeCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhh
Q psy775 927 VSPFAGAGEQMHEALICNPYEIDAAAEVIHRAL---TMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLIT 998 (1460)
Q Consensus 927 ~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL---~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 998 (1460)
.|..| -..+++|+|.|++++|++|.+|+ +.+...++.+.+++ ...++++.-+++.++-+.+...
T Consensus 415 -~~~~~----~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~l~~ 481 (485)
T PRK14099 415 -AIATG----VATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRSLVA 481 (485)
T ss_pred -ccccC----CCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHHHHh
Confidence 00011 02469999999999999999853 34433333443332 3567888888887766666543
No 76
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.73 E-value=4.3e-16 Score=178.88 Aligned_cols=252 Identities=21% Similarity=0.249 Sum_probs=170.2
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcH----------HHHhhhccCceeeeccH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSD----------EILQGMLGCDMVGFHIE 280 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~----------eil~gLL~aDlIgF~t~ 280 (1460)
..|+|.+|+...+........+ ..+.++.+.+|.+|+.. ....+... .....+..||.+-..+.
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~ 157 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVAR----KLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSE 157 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHH----HcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccH
Confidence 4689999987544333332221 23678999999887632 22222111 11122334677766666
Q ss_pred HhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhh--h-ccCCeEEEEecCccccCCHH
Q psy775 281 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRV--I-DTKQKIVLGVDRLDYTKGLV 357 (1460)
Q Consensus 281 ~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~--~-~~~~kvIL~VgRLd~~KGI~ 357 (1460)
.....+.+ .+...++.++|+|+|...+........+. . ..+++.++++||+.+.||+.
T Consensus 158 ~~~~~~~~-------------------~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~ 218 (374)
T cd03817 158 KIADLLRE-------------------YGVKRPIEVIPTGIDLDRFEPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNID 218 (374)
T ss_pred HHHHHHHh-------------------cCCCCceEEcCCccchhccCccchhHHHHhcCCCCCCeEEEEEeeeecccCHH
Confidence 54333322 11223478899999988776542211110 1 14567899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh
Q psy775 358 HRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 437 (1460)
Q Consensus 358 ~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~a 437 (1460)
.+++|+.++.++.|++ .++.+|.+ +.. .++.+++.+.+. .+.+.+.|.++++++..+|+.
T Consensus 219 ~l~~~~~~~~~~~~~~----~l~i~G~~-----~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ 278 (374)
T cd03817 219 FLIRAFARLLKEEPDV----KLVIVGDG-----PER----EELEELARELGL-------ADRVIFTGFVPREELPDYYKA 278 (374)
T ss_pred HHHHHHHHHHHhCCCe----EEEEEeCC-----chH----HHHHHHHHHcCC-------CCcEEEeccCChHHHHHHHHH
Confidence 9999999998876654 46666532 222 223333333221 233556799999999999999
Q ss_pred ccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHH
Q psy775 438 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 438 ADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R 513 (1460)
||++++||..||+|++.+|||+| |.|+|+|..+|..+.+.+ |+++++.|. +++++|.++++++...++++
T Consensus 279 ad~~l~~s~~e~~~~~~~Ea~~~-----g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~ 351 (374)
T cd03817 279 ADLFVFASTTETQGLVLLEAMAA-----GLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLS 351 (374)
T ss_pred cCEEEecccccCcChHHHHHHHc-----CCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHH
Confidence 99999999999999999999999 677799998887777743 899999888 99999999999877654433
No 77
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.72 E-value=2.8e-16 Score=185.78 Aligned_cols=236 Identities=14% Similarity=0.098 Sum_probs=162.5
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|++|+.....+..++++.. +...++..+.|..++....+. ...+..+|.+-..+..-...+.+
T Consensus 84 ~~Dii~~~~~~~~~~~~~~~~~~---~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~~-- 150 (359)
T PRK09922 84 QPDIVICIDVISCLYANKARKKS---GKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMMA-- 150 (359)
T ss_pred CCCEEEEcCHHHHHHHHHHHHHh---CCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHHH--
Confidence 46999999988777777776542 334566667776554432111 11235678877776655444432
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCcc--ccCCHHHHHHHHHHHHH
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLD--YTKGLVHRLKAFETLLE 368 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd--~~KGI~~lL~Af~~lL~ 368 (1460)
.|. ...++.++|+|+|.+.+..... ...++++++++||+. +.||+..+++|+.++.
T Consensus 151 ---~~~-------------~~~ki~vi~N~id~~~~~~~~~-----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~- 208 (359)
T PRK09922 151 ---RGI-------------SAQRISVIYNPVEIKTIIIPPP-----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT- 208 (359)
T ss_pred ---cCC-------------CHHHEEEEcCCCCHHHccCCCc-----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC-
Confidence 111 1235678899999765432111 013467899999996 4699999999998762
Q ss_pred hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCC--CHHHHHHHHHhccEEEEccC
Q psy775 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCI--SQDELASFYRDAAVALVTPL 446 (1460)
Q Consensus 369 ~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v--~~eeL~aLY~aADV~VvpSl 446 (1460)
+ ++.|+.+|.+ ++.+ ++++++.+.+. ..-+.|.|.+ +.+++..+|+.||++|+||.
T Consensus 209 --~----~~~l~ivG~g-----~~~~----~l~~~~~~~~l-------~~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~ 266 (359)
T PRK09922 209 --G----EWQLHIIGDG-----SDFE----KCKAYSRELGI-------EQRIIWHGWQSQPWEVVQQKIKNVSALLLTSK 266 (359)
T ss_pred --C----CeEEEEEeCC-----ccHH----HHHHHHHHcCC-------CCeEEEecccCCcHHHHHHHHhcCcEEEECCc
Confidence 2 3567766632 2222 33444444332 2235566865 45899999999999999999
Q ss_pred CCCCCcceeeeeeeccCCCCCeEEEcC-CCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHH
Q psy775 447 RDGMNLVAKEFVACQINEPPGVLIVSP-FAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 447 rEGfnLValEamAcq~~~~~GvlVlSe-~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
.||||++++||||| |.|+|+|+ .+|..+.+.+ |++|+|.|++++|++|.++++.+..
T Consensus 267 ~Egf~~~~lEAma~-----G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~ 327 (359)
T PRK09922 267 FEGFPMTLLEAMSY-----GIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK 327 (359)
T ss_pred ccCcChHHHHHHHc-----CCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCccc
Confidence 99999999999999 67789999 7887777743 8999999999999999999997753
No 78
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.72 E-value=3.4e-16 Score=188.98 Aligned_cols=178 Identities=16% Similarity=0.175 Sum_probs=137.9
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
+...|++|||+.+.||+...++|++++.+++|+ +.|+.+|.+ + +++++++++++.+ ....
T Consensus 221 ~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~----~~l~ivG~G-----~----~~~~l~~~~~~~~-------l~~~ 280 (406)
T PRK15427 221 TPLEIISVARLTEKKGLHVAIEACRQLKEQGVA----FRYRILGIG-----P----WERRLRTLIEQYQ-------LEDV 280 (406)
T ss_pred CCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCC----EEEEEEECc-----h----hHHHHHHHHHHcC-------CCCe
Confidence 345689999999999999999999998888876 456666643 2 3355666665543 2345
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCc------cCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccch
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLR------DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID 893 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlr------EGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~ 893 (1460)
+.+.|.++++|+..+|+.||++|+||.. ||++++.+||||| +.|+|+|..+|..+.+
T Consensus 281 V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~-----G~PVI~t~~~g~~E~v------------ 343 (406)
T PRK15427 281 VEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAV-----GIPVVSTLHSGIPELV------------ 343 (406)
T ss_pred EEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhC-----CCCEEEeCCCCchhhh------------
Confidence 8889999999999999999999999984 9999999999999 7899999999877621
Q ss_pred hhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHH-HHHHHH
Q psy775 894 AAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDER-TLRMNY 972 (1460)
Q Consensus 894 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er-~~r~~~ 972 (1460)
.++ ..+++++|.|++++|++|.+.++++++++ ++..++
T Consensus 344 ---------------------------------~~~--------~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~a 382 (406)
T PRK15427 344 ---------------------------------EAD--------KSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRA 382 (406)
T ss_pred ---------------------------------cCC--------CceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 111 34689999999999999999999555544 444444
Q ss_pred HHhHHHhcCHHHHHHHHHHHHhh
Q psy775 973 LRKREKVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 973 ~~~~v~~~~~~~W~~~~l~~l~~ 995 (1460)
.......++++..++++.+-+.+
T Consensus 383 r~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 383 REKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHhcCHHHHHHHHHHHHhh
Confidence 33344668888888887776653
No 79
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.72 E-value=1.6e-16 Score=194.26 Aligned_cols=317 Identities=13% Similarity=0.154 Sum_probs=183.5
Q ss_pred cccccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCC
Q psy775 160 NGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLK 239 (1460)
Q Consensus 160 n~~LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~ 239 (1460)
+.-||..|+- ++...+.++.++-. +--+-|..|.+.++.+ ...+.|++-.||.+--....+||++. ++
T Consensus 105 ~~~lW~~~~i--~s~~~~~d~nea~~-fgy~~~~~i~~~~~~~-----~~~~~dViH~HeWm~g~a~~~lK~~~----~~ 172 (590)
T cd03793 105 KGELWELCGI--GSPEGDRETNDAII-FGFLVAWFLGEFAEQF-----DDEPAVVAHFHEWQAGVGLPLLRKRK----VD 172 (590)
T ss_pred HHHHHHHcCC--CCCCCCCcchHHHH-HHHHHHHHHHHHHhhc-----cCCCCeEEEEcchhHhHHHHHHHHhC----CC
Confidence 4557887764 33333333332211 1113334444444321 11368999999999999999998643 47
Q ss_pred ceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccH--------------HhHHHHHH-----HHHhhcC-ceec
Q psy775 240 FKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIE--------------DYCLNFVD-----CCQRRLG-CRVD 299 (1460)
Q Consensus 240 ~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~--------------~yar~FL~-----~~~riLg-~~~~ 299 (1460)
++..|..| ..+.-|.|- +.+ .+|+.. -+.++.++ .|++++. ++..
T Consensus 173 VptVfTtH----AT~~GR~l~----------~g~-~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it 237 (590)
T cd03793 173 VSTIFTTH----ATLLGRYLC----------AGN-VDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEIT 237 (590)
T ss_pred CCEEEEec----ccccccccc----------cCC-cccchhhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHH
Confidence 88999999 333333211 111 222210 02223222 2333331 1111
Q ss_pred CCCcEEEECCeEEEEEEeecccCchhhhhhhcc------c----hh-----hhc-----cCCeEEEE-ecCccc-cCCHH
Q psy775 300 RKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA------A----PR-----VID-----TKQKIVLG-VDRLDY-TKGLV 357 (1460)
Q Consensus 300 ~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~------~----~~-----~~~-----~~~kvIL~-VgRLd~-~KGI~ 357 (1460)
.... ....++...+ |+|+|+|++.|.+..+. + .+ ..+ .+++++++ +||+++ .||++
T Consensus 238 ~~E~-~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiD 315 (590)
T cd03793 238 AYEA-EHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGAD 315 (590)
T ss_pred HHHH-HHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHH
Confidence 1111 1223444333 99999999998654310 0 01 111 35678888 899999 99999
Q ss_pred HHHHHHHHHHHhCCC-CCCcEEEEEEEcCCCCC---------hHHHHHHHHHHHHHHHHHhcc-c---------------
Q psy775 358 HRLKAFETLLEKHPE-HLEKVTLLQIAVPSRTD---------VKEYQDLKEEMDQLVGRINGR-F--------------- 411 (1460)
Q Consensus 358 ~lL~Af~~lL~~~P~-~~~kvvLvqig~psr~~---------~~ey~~L~~ev~~lv~~IN~~-f--------------- 411 (1460)
.+|+|+.++-..-.. -..+.|+..+..|+... ....+++++.++.+..+|+.+ |
T Consensus 316 vlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~ 395 (590)
T cd03793 316 MFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELL 395 (590)
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhc
Confidence 999999988652111 11223444555565532 133455666666666555555 0
Q ss_pred ----------------------------------------------CC-CCcccEEEEcCCCCH------HHHHHHHHhc
Q psy775 412 ----------------------------------------------TT-PNWSPIRYIYGCISQ------DELASFYRDA 438 (1460)
Q Consensus 412 ----------------------------------------------g~-~~~~pIv~~~g~v~~------eeL~aLY~aA 438 (1460)
.. .+-..|+|....++. .+...+|+.|
T Consensus 396 ~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~ 475 (590)
T cd03793 396 DKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC 475 (590)
T ss_pred chhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc
Confidence 00 111123333222221 3466789999
Q ss_pred cEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCch----hccc----ccEEEC-------CCCHHHHHHHHHHHc
Q psy775 439 AVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAG----EQMH----EALICN-------PYEIDAAAEVIHRAL 503 (1460)
Q Consensus 439 DV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa----~~L~----~allVN-------P~D~~elA~AI~~aL 503 (1460)
|++|+||.+||||++++||||| |.|+|.|..+|.. +.++ .|++|. |.++++++++|.+.+
T Consensus 476 dl~v~PS~yE~fG~~~lEAma~-----G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~ 550 (590)
T cd03793 476 HLGVFPSYYEPWGYTPAECTVM-----GIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFC 550 (590)
T ss_pred eEEEeccccCCCCcHHHHHHHc-----CCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 6778999999883 3333 378887 566789999999988
Q ss_pred CCCHHHH
Q psy775 504 TMPEDER 510 (1460)
Q Consensus 504 ~m~~~er 510 (1460)
.++..++
T Consensus 551 ~~~~r~~ 557 (590)
T cd03793 551 QLSRRQR 557 (590)
T ss_pred CCcHHHH
Confidence 7654333
No 80
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.72 E-value=2.6e-16 Score=185.59 Aligned_cols=290 Identities=17% Similarity=0.162 Sum_probs=187.3
Q ss_pred ccccccCCCCccccCHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhccCCCceE
Q psy775 163 FWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 242 (1460)
Q Consensus 163 LWPlfH~~~d~~~f~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~I 242 (1460)
+|+++.+......|+ ...++-+.|-+++.. . ...|+|.+|-.+....+ .++.. ...+.
T Consensus 67 ~~~~~~~~~~~~~f~-----~~~~l~~~~l~~l~~--~---------~~~diii~~~~~~~~~~-~~~~~-----~~~~~ 124 (372)
T cd04949 67 LIILLNYQGEDYFFN-----NEEELFAFFLDELNK--D---------TKPDVFILDRPTLDGQA-LLNMK-----KAAKV 124 (372)
T ss_pred EEEEEEecCceEEEC-----CHHHHHHHHHHHHhc--C---------CCCCEEEECCccccchh-HHhcc-----CCceE
Confidence 677776655444443 223333334443322 0 15788888877766552 33321 24556
Q ss_pred EEEEecCC-CCccccccCC---CcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEee
Q psy775 243 GFFLHIPF-PPWDIFRLFP---WSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLP 318 (1460)
Q Consensus 243 gfFlHiPF-Ps~eifr~LP---~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viP 318 (1460)
..++|... .....-...+ ..+.++..+-.+|.|.+.+..-.+.+.+.. + ...++.++|
T Consensus 125 i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~~~----~--------------~~~~v~~ip 186 (372)
T cd04949 125 VVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQKQF----G--------------NYNPIYTIP 186 (372)
T ss_pred EEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHHHh----C--------------CCCceEEEc
Confidence 67777432 1111000111 234566666778988888876666654421 1 111267899
Q ss_pred cccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHH
Q psy775 319 IAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKE 398 (1460)
Q Consensus 319 iGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ 398 (1460)
+|++.+.+.+.. .....+..++++||+.+.||+..+++|+.++.+++|+++ |+.+|.+. ....++.
T Consensus 187 ~g~~~~~~~~~~-----~~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g~-----~~~~~~~ 252 (372)
T cd04949 187 VGSIDPLKLPAQ-----FKQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYGD-----EEEKLKE 252 (372)
T ss_pred ccccChhhcccc-----hhhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeCc-----hHHHHHH
Confidence 999988765421 011345678999999999999999999999999999863 55566432 1222322
Q ss_pred HHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCC-Cc
Q psy775 399 EMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA-GA 477 (1460)
Q Consensus 399 ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~a-Ga 477 (1460)
. +.+.+ ....+.+.| ..+++..+|+.||++++||..||||++++|||+| |.|+|+|... |.
T Consensus 253 ~----~~~~~-------~~~~v~~~g--~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~-----G~PvI~~~~~~g~ 314 (372)
T cd04949 253 L----IEELG-------LEDYVFLKG--YTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH-----GLPVISYDVNYGP 314 (372)
T ss_pred H----HHHcC-------CcceEEEcC--CCCCHHHHHhhhhEEEecccccccChHHHHHHhC-----CCCEEEecCCCCc
Confidence 2 22222 123455667 3567999999999999999999999999999999 6777999876 66
Q ss_pred hhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 478 GEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 478 a~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.+.+.+ |++++|.|++++|++|.++++++...++++.++. +...+++
T Consensus 315 ~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~-~~~~~~s 364 (372)
T cd04949 315 SEIIEDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAY-ENAERYS 364 (372)
T ss_pred HHHcccCCCceEeCCCcHHHHHHHHHHHHcCHHHHHHHHHHHH-HHHHHhh
Confidence 666643 8999999999999999999998755555544443 3344444
No 81
>PLN02949 transferase, transferring glycosyl groups
Probab=99.72 E-value=4.7e-16 Score=190.50 Aligned_cols=193 Identities=17% Similarity=0.211 Sum_probs=144.1
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
++.+++++||+.+.||+...|+||+++.++.|+-..++.|+.+|.... ++..++.+++++++++.+-. ..
T Consensus 267 ~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~---~~~~~~~~eL~~la~~l~L~-------~~ 336 (463)
T PLN02949 267 DPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN---KEDEERLQKLKDRAKELGLD-------GD 336 (463)
T ss_pred CCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC---cccHHHHHHHHHHHHHcCCC-------Cc
Confidence 456789999999999999999999999876543223467888886521 12223455666666654432 23
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhh
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
+.|.|+++.+++.++|+.||+++.||..||||++++||||| +.|+|+|..+|....
T Consensus 337 V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~-----G~PVIa~~~gGp~~e------------------- 392 (463)
T PLN02949 337 VEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAA-----GAVPIAHNSAGPKMD------------------- 392 (463)
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHc-----CCcEEEeCCCCCcce-------------------
Confidence 66789999999999999999999999999999999999999 678999998885430
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHh
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKV 979 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~ 979 (1460)
+|.++..| ..+++++ |++++|++|.+++++++++++.-.+..++.+.+
T Consensus 393 -------------------------IV~~~~~g-----~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~ 440 (463)
T PLN02949 393 -------------------------IVLDEDGQ-----QTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANR 440 (463)
T ss_pred -------------------------eeecCCCC-----cccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 12222112 2345664 999999999999998776665444445677788
Q ss_pred cCHHHHHHHHHHHHhhhhh
Q psy775 980 HDVNYWMRSFLKGMGTLIT 998 (1460)
Q Consensus 980 ~~~~~W~~~~l~~l~~~~~ 998 (1460)
++.+.-.+++.+.+.....
T Consensus 441 FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 441 FSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred cCHHHHHHHHHHHHHHHHh
Confidence 9999999999888876543
No 82
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.72 E-value=9.7e-16 Score=181.25 Aligned_cols=290 Identities=17% Similarity=0.166 Sum_probs=189.1
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccc-----cccCccHHH-HHhhcccCceeecccHhHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDI-----FRLFPWSDE-ILQGMLGCDMVGFHIEDYCLNF 641 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~-----fr~lP~r~e-IL~~LL~aDlIGFqt~~yar~F 641 (1460)
|+|..|++...+.+...+ .....+..+.+|-.+|.... ......... ....+-.+|.|-..+....+.+
T Consensus 85 divh~~~~~~~~~~~~~~-----~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~ 159 (388)
T TIGR02149 85 DVVHSHTWYTFLAGHLAK-----KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDI 159 (388)
T ss_pred CeEeecchhhhhHHHHHH-----HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHH
Confidence 688888877655444333 12345677788864332111 000000011 1123345666666655554444
Q ss_pred HHHHHHHhCceeeCCCcEEEE-CCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhc
Q psy775 642 VDCCQRRLGCRVDRKNLLVEH-GGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIA 720 (1460)
Q Consensus 642 L~~c~rlLg~~~~~~~~~i~~-~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~ 720 (1460)
.+. + +-...++.++|+|+|.+.|.+... ...+++++
T Consensus 160 ~~~-----------------~~~~~~~~i~vi~ng~~~~~~~~~~~--------------------------~~~~~~~~ 196 (388)
T TIGR02149 160 LKY-----------------YPDLDPEKVHVIYNGIDTKEYKPDDG--------------------------NVVLDRYG 196 (388)
T ss_pred HHH-----------------cCCCCcceEEEecCCCChhhcCCCch--------------------------HHHHHHhC
Confidence 321 1 112346788999999877643110 12333333
Q ss_pred CchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHH
Q psy775 721 IPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEM 800 (1460)
Q Consensus 721 i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el 800 (1460)
+ ..++++|+++||+.+.||+..+++|++++. ++ +.++.+|.+... .++.+++
T Consensus 197 ~----------------~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~---~~----~~l~i~g~g~~~-----~~~~~~~ 248 (388)
T TIGR02149 197 I----------------DRSRPYILFVGRITRQKGVPHLLDAVHYIP---KD----VQVVLCAGAPDT-----PEVAEEV 248 (388)
T ss_pred C----------------CCCceEEEEEcccccccCHHHHHHHHHHHh---hc----CcEEEEeCCCCc-----HHHHHHH
Confidence 2 256778999999999999999999999873 23 345555533211 1344556
Q ss_pred HHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchh
Q psy775 801 DQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQ 880 (1460)
Q Consensus 801 ~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~ 880 (1460)
++.+.+.+... ..++++.+.++.+++..+|+.||++++||..||||++.+|||+| +.|+|+|..+|..+.
T Consensus 249 ~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~-----G~PvI~s~~~~~~e~ 318 (388)
T TIGR02149 249 RQAVALLDRNR-----TGIIWINKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMAC-----GTPVVASATGGIPEV 318 (388)
T ss_pred HHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHc-----CCCEEEeCCCCHHHH
Confidence 65555554321 23677788999999999999999999999999999999999999 789999998886662
Q ss_pred hhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCH------HHHHHH
Q psy775 881 MHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEI------DAAAEV 954 (1460)
Q Consensus 881 L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~------~~iA~a 954 (1460)
+. ++ ..+++++|.|. ++++++
T Consensus 319 i~---------------------------------------------~~--------~~G~~~~~~~~~~~~~~~~l~~~ 345 (388)
T TIGR02149 319 VV---------------------------------------------DG--------ETGFLVPPDNSDADGFQAELAKA 345 (388)
T ss_pred hh---------------------------------------------CC--------CceEEcCCCCCcccchHHHHHHH
Confidence 11 01 24688999998 999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 955 IHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 955 i~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
|.+.++.+...++++.+.......+++++.+++++++.+.+.
T Consensus 346 i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 346 INILLADPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999998655545555555444456789999999988777653
No 83
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.71 E-value=1.6e-15 Score=178.71 Aligned_cols=287 Identities=22% Similarity=0.243 Sum_probs=191.8
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCc--ccccc---Ccc--HHHHHhhcccCceeecccHhHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPW--DIFRL---FPW--SDEILQGMLGCDMVGFHIEDYCLN 640 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~--e~fr~---lP~--r~eIL~~LL~aDlIGFqt~~yar~ 640 (1460)
|+|-+|++........+. .....+..+..|...... ..... .+. ...-...+..+|.|.+.+......
T Consensus 103 Div~~~~~~~~~~~~~~~-----~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 177 (398)
T cd03800 103 DLIHAHYWDSGLVALLLA-----RRLGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEE 177 (398)
T ss_pred cEEEEecCccchHHHHHH-----hhcCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHH
Confidence 788888876555444443 123456777777642211 11100 001 111123456789998888876666
Q ss_pred HHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhc
Q psy775 641 FVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIA 720 (1460)
Q Consensus 641 FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~ 720 (1460)
+.+.- .....++.++|+|+|.+.|...... ...++.++
T Consensus 178 ~~~~~-----------------~~~~~~~~vi~ng~~~~~~~~~~~~-------------------------~~~~~~~~ 215 (398)
T cd03800 178 LYSLY-----------------GAYPRRIRVVPPGVDLERFTPYGRA-------------------------EARRARLL 215 (398)
T ss_pred HHHHc-----------------cccccccEEECCCCCccceecccch-------------------------hhHHHhhc
Confidence 54321 1122237889999998776432110 00011111
Q ss_pred CchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHH
Q psy775 721 IPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEM 800 (1460)
Q Consensus 721 i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el 800 (1460)
...++++|+++||+++.||+...++|+.++.+++|+ +.|+.+|.......+ ....++
T Consensus 216 ----------------~~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~----~~l~i~G~~~~~~~~---~~~~~~ 272 (398)
T cd03800 216 ----------------RDPDKPRILAVGRLDPRKGIDTLIRAYAELPELRER----ANLVIVGGPRDDILA---MDEEEL 272 (398)
T ss_pred ----------------cCCCCcEEEEEcccccccCHHHHHHHHHHHHHhCCC----eEEEEEECCCCcchh---hhhHHH
Confidence 125678999999999999999999999999888776 467777765433222 223345
Q ss_pred HHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchh
Q psy775 801 DQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQ 880 (1460)
Q Consensus 801 ~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~ 880 (1460)
+.++.+.+.. +-+.+.|.++.+++..+|+.||++++||..||++++.+|||+| +.|+|+|+.+|..+.
T Consensus 273 ~~~~~~~~~~-------~~v~~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~-----G~Pvi~s~~~~~~e~ 340 (398)
T cd03800 273 RELARELGVI-------DRVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMAC-----GLPVVATAVGGPRDI 340 (398)
T ss_pred HHHHHhcCCC-------ceEEEeccCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhc-----CCCEEECCCCCHHHH
Confidence 5555544322 3477889999999999999999999999999999999999999 779999998886661
Q ss_pred hhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhC
Q psy775 881 MHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALT 960 (1460)
Q Consensus 881 L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~ 960 (1460)
+ .+ ...+++++|.|+++++++|.++++
T Consensus 341 i---------------------------------------------~~--------~~~g~~~~~~~~~~l~~~i~~l~~ 367 (398)
T cd03800 341 V---------------------------------------------VD--------GVTGLLVDPRDPEALAAALRRLLT 367 (398)
T ss_pred c---------------------------------------------cC--------CCCeEEeCCCCHHHHHHHHHHHHh
Confidence 1 11 134689999999999999999998
Q ss_pred CCHHHHHHHHHHHHhHH-HhcCHHHHHHHHH
Q psy775 961 MPEDERTLRMNYLRKRE-KVHDVNYWMRSFL 990 (1460)
Q Consensus 961 m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 990 (1460)
++...++...+. ++++ +.++++.++++++
T Consensus 368 ~~~~~~~~~~~a-~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 368 DPALRRRLSRAG-LRRARARYTWERVAARLL 397 (398)
T ss_pred CHHHHHHHHHHH-HHHHHHhCCHHHHHHHHh
Confidence 765545555444 4555 7889888888765
No 84
>PHA01633 putative glycosyl transferase group 1
Probab=99.71 E-value=1.2e-16 Score=187.48 Aligned_cols=179 Identities=18% Similarity=0.238 Sum_probs=130.8
Q ss_pred eecccCchhhhhhhccchhhhc------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCCh
Q psy775 317 LPIAIPYERFVQLAQAAPRVID------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDV 390 (1460)
Q Consensus 317 iPiGID~~~f~~~~~~~~~~~~------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~ 390 (1460)
+|.|||.+.|.+.....+..++ .+..++++|||+++.||+..+++|++++.+++|++..++.++.+|.
T Consensus 118 I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~------ 191 (335)
T PHA01633 118 VFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH------ 191 (335)
T ss_pred eeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH------
Confidence 5679999988753211111111 4567889999999999999999999999999998866677765541
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCcccEEEEc--CCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCe
Q psy775 391 KEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIY--GCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGV 468 (1460)
Q Consensus 391 ~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~--g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~Gv 468 (1460)
. .+ .+ .+. . ..|.+.. |.++.+++.++|++||++|+||..||||++++||||| |.|
T Consensus 192 ~---~~----~~----l~l----~--~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~-----G~P 249 (335)
T PHA01633 192 K---QF----TQ----LEV----P--ANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM-----GTP 249 (335)
T ss_pred H---HH----HH----cCC----C--CcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc-----CCC
Confidence 1 11 11 110 1 1244432 6778999999999999999999999999999999999 677
Q ss_pred EEEcCCCCchhcccc---------------------cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 469 LIVSPFAGAGEQMHE---------------------ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 469 lVlSe~aGaa~~L~~---------------------allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
+|+|..+|..+..++ |..++++|++++|++|.+++.+.+.+ .|....++..++++
T Consensus 250 VVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~--~~~~~~~~~a~~f~ 325 (335)
T PHA01633 250 VIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDRE--ERSMKLKELAKKYD 325 (335)
T ss_pred EEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChh--hhhHHHHHHHHhcC
Confidence 899988765554321 45788999999999999998776433 23445567777777
No 85
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.71 E-value=6.9e-16 Score=177.54 Aligned_cols=257 Identities=19% Similarity=0.146 Sum_probs=170.2
Q ss_pred CCCEEEEeCcchhHHH-HHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHH----HH-hhhccCceeeeccHHhHH
Q psy775 211 GTPLVWIHDYHLMLAA-NTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDE----IL-QGMLGCDMVGFHIEDYCL 284 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP-~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~e----il-~gLL~aDlIgF~t~~yar 284 (1460)
..|+|.+|........ ..+.++ .+.++.+.+|..||.+-.......... +. ...-.+|.+-+.+.....
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARR-----LGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHH-----cCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 4789999976543222 222222 257888899987773322111111111 11 112246666666655444
Q ss_pred HHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh---ccCCeEEEEecCccccCCHHHHHH
Q psy775 285 NFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI---DTKQKIVLGVDRLDYTKGLVHRLK 361 (1460)
Q Consensus 285 ~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~---~~~~kvIL~VgRLd~~KGI~~lL~ 361 (1460)
.+.. ....++.++|+|+|.+.|.+......... ..++++++++||+.+.||+..+++
T Consensus 158 ~~~~--------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 158 ELRA--------------------RGFRRVRLWPRGVDTELFHPRRRDEALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred HHhc--------------------cCCCceeecCCCccccccCcccccHHHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 2111 11135678999999887754322211111 145678999999999999999999
Q ss_pred HHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEE
Q psy775 362 AFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVA 441 (1460)
Q Consensus 362 Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~ 441 (1460)
|+.++.++ |++ .++.+|.. ++...++ ..+ ..| .+.|.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~~----~l~i~G~~-----~~~~~~~--------~~~--------~~v-~~~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PPV----RLVIVGDG-----PARARLE--------ARY--------PNV-HFLGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CCc----eEEEEeCC-----chHHHHh--------ccC--------CcE-EEEeccCHHHHHHHHHhCCEE
Confidence 99999876 654 46656632 1111222 011 123 445889999999999999999
Q ss_pred EEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q psy775 442 LVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 518 (1460)
Q Consensus 442 VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~ 518 (1460)
++||..||||++++||||| |.|+|+|..+|..+.+.. |++++|.|.++++++|.++++.++...++..+. +
T Consensus 271 l~~s~~e~~~~~~lEa~a~-----g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~-~ 344 (364)
T cd03814 271 VFPSRTETFGLVVLEAMAS-----GLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARA-R 344 (364)
T ss_pred EECcccccCCcHHHHHHHc-----CCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHH-H
Confidence 9999999999999999999 677899999888887753 899999999999999999998776555544433 4
Q ss_pred HHHhhcC
Q psy775 519 KREKHMN 525 (1460)
Q Consensus 519 ~~v~~~~ 525 (1460)
+.+.+++
T Consensus 345 ~~~~~~~ 351 (364)
T cd03814 345 AEAERRS 351 (364)
T ss_pred HHHhhcC
Confidence 4445555
No 86
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.71 E-value=4.9e-16 Score=175.84 Aligned_cols=252 Identities=17% Similarity=0.144 Sum_probs=169.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
.-|+|++|+.+...+...+... ..++.+..|..++....... +....-..+-.+|.+-+.+......
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~----- 149 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLK------IVKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRAL----- 149 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhc------cccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHH-----
Confidence 4799999998832333233211 13777888876543221110 1111233344567776666654400
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhC
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 370 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~ 370 (1460)
.......++.++|+|++...+... ...+++.++++||+.+.||+..+++|+.++.+.+
T Consensus 150 ---------------~~~~~~~~~~vi~~~~~~~~~~~~-------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~ 207 (348)
T cd03820 150 ---------------YYKKFNKNVVVIPNPLPFPPEEPS-------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKH 207 (348)
T ss_pred ---------------hhccCCCCeEEecCCcChhhcccc-------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHhcC
Confidence 011223467889999998766432 1245678999999999999999999999998877
Q ss_pred CCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCC
Q psy775 371 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGM 450 (1460)
Q Consensus 371 P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGf 450 (1460)
|++ .|+.+|.. +....+++ ++.+.+ ..+.+.+.|. .+++..+|+.||++++||..|||
T Consensus 208 ~~~----~l~i~G~~-----~~~~~~~~----~~~~~~-------~~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~ 265 (348)
T cd03820 208 PDW----KLRIVGDG-----PEREALEA----LIKELG-------LEDRVILLGF--TKNIEEYYAKASIFVLTSRFEGF 265 (348)
T ss_pred CCe----EEEEEeCC-----CCHHHHHH----HHHHcC-------CCCeEEEcCC--cchHHHHHHhCCEEEeCcccccc
Confidence 775 45555532 22222322 333332 2344566676 78999999999999999999999
Q ss_pred CcceeeeeeeccCCCCCeEEEcCCCCchhcc-c---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 451 NLVAKEFVACQINEPPGVLIVSPFAGAGEQM-H---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 451 nLValEamAcq~~~~~GvlVlSe~aGaa~~L-~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|++++|||+| |.|+|+|...|..+.+ . .|+++++.|+++++++|.+++++++..++++.++ ++.+++++
T Consensus 266 ~~~~~Ea~a~-----G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~ 338 (348)
T cd03820 266 PMVLLEAMAF-----GLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANA-RESAERFS 338 (348)
T ss_pred CHHHHHHHHc-----CCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHH-HHHHHHhC
Confidence 9999999999 6777999876555444 2 4899999999999999999999776655555444 56666666
No 87
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.70 E-value=1.6e-15 Score=179.18 Aligned_cols=180 Identities=17% Similarity=0.243 Sum_probs=139.3
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++.+|+++||+++.||+..+++||..+++++|+...++.|+.+|.+. .++++++.+.+.+ +..
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~---------~~~~~~~~~~~~~-------~~~ 255 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP---------ARGACEQMVRAAG-------LAH 255 (374)
T ss_pred CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc---------hHHHHHHHHHHcC-------Ccc
Confidence 467899999999999999999999999999999776678888888432 1234444444332 334
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+++.|. .+++..+|+.||+++.||..|||+++.+|||+| +.|+|+|..+|..+.+.
T Consensus 256 ~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~-----G~Pvv~s~~~g~~e~i~---------------- 312 (374)
T TIGR03088 256 LVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS-----GLPVIATAVGGNPELVQ---------------- 312 (374)
T ss_pred eEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc-----CCCEEEcCCCCcHHHhc----------------
Confidence 5777774 568999999999999999999999999999999 78999999988776211
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH-
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE- 977 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v- 977 (1460)
++ ..+++++|.|++++|++|.++++.+...+..+.+ .++++
T Consensus 313 -----------------------------~~--------~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~-a~~~~~ 354 (374)
T TIGR03088 313 -----------------------------HG--------VTGALVPPGDAVALARALQPYVSDPAARRAHGAA-GRARAE 354 (374)
T ss_pred -----------------------------CC--------CceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH-HHHHHH
Confidence 01 2468999999999999999999865544444444 34554
Q ss_pred HhcCHHHHHHHHHHHHhh
Q psy775 978 KVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 978 ~~~~~~~W~~~~l~~l~~ 995 (1460)
..+++...++++.+-+.+
T Consensus 355 ~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 355 QQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 678988888887776654
No 88
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.70 E-value=1.8e-15 Score=186.93 Aligned_cols=258 Identities=15% Similarity=0.109 Sum_probs=162.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCc-cccccCC-C---cHHHHhhhccCceeeeccHHhHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPW-DIFRLFP-W---SDEILQGMLGCDMVGFHIEDYCLN 285 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~-eifr~LP-~---r~eil~gLL~aDlIgF~t~~yar~ 285 (1460)
++|+|.++--. ...+..+.. ...+++...+|.-.=+. ..-..-+ | -+..++.+-.+|.|-..|..-.+.
T Consensus 211 ~~di~i~dr~~-~~~~~~~~~-----~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~ 284 (500)
T TIGR02918 211 KKDIIILDRST-GIGQAVLEN-----KGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQI 284 (500)
T ss_pred CCCEEEEcCCc-ccchHHHhc-----CCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHH
Confidence 47877665434 444555543 23689999999532000 0000000 1 112234444456666656543333
Q ss_pred HHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHH
Q psy775 286 FVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 286 FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
..+... .+.+...+|.++|+|++.+.+.+. ....+..|++|||+.+.||+..+|+|+.+
T Consensus 285 l~~~~~--------------~~~~~~~ki~viP~g~~~~~~~~~-------~~r~~~~il~vGrl~~~Kg~~~li~A~~~ 343 (500)
T TIGR02918 285 LKNQFK--------------KYYNIEPRIYTIPVGSLDELQYPE-------QERKPFSIITASRLAKEKHIDWLVKAVVK 343 (500)
T ss_pred HHHHhh--------------hhcCCCCcEEEEcCCCcccccCcc-------cccCCeEEEEEeccccccCHHHHHHHHHH
Confidence 222110 122334567889999876544321 01234579999999999999999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
+.+++|++ .|+++|. +++. +++++++.+.+. ...+.+.|.. ++..+|+.||++|+||
T Consensus 344 l~~~~p~~----~l~i~G~-----G~~~----~~l~~~i~~~~l-------~~~V~f~G~~---~~~~~~~~adv~v~pS 400 (500)
T TIGR02918 344 AKKSVPEL----TFDIYGE-----GGEK----QKLQKIINENQA-------QDYIHLKGHR---NLSEVYKDYELYLSAS 400 (500)
T ss_pred HHhhCCCe----EEEEEEC-----chhH----HHHHHHHHHcCC-------CCeEEEcCCC---CHHHHHHhCCEEEEcC
Confidence 99999975 3555553 2332 334444444322 2335566765 5677899999999999
Q ss_pred CCCCCCcceeeeeeeccCCCCCeEEEcCCC-Cchhccc---ccEEECC----CC----HHHHHHHHHHHcCCCHHHHHHH
Q psy775 446 LRDGMNLVAKEFVACQINEPPGVLIVSPFA-GAGEQMH---EALICNP----YE----IDAAAEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~~~GvlVlSe~a-Gaa~~L~---~allVNP----~D----~~elA~AI~~aL~m~~~er~~R 513 (1460)
.+||||++++||||| |.|+|+|... |..+.+. .|++|+| .| ++++|++|.++|+ ++..++++
T Consensus 401 ~~Egfgl~~lEAma~-----G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~~~~~~~ 474 (500)
T TIGR02918 401 TSEGFGLTLMEAVGS-----GLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SNDIDAFH 474 (500)
T ss_pred ccccccHHHHHHHHh-----CCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC-hHHHHHHH
Confidence 999999999999999 6778999986 6666663 2899974 33 8899999999995 44333333
Q ss_pred HHHHHHHHhhcC
Q psy775 514 MNYLRKREKHMN 525 (1460)
Q Consensus 514 ~~~l~~~v~~~~ 525 (1460)
. ..++..++++
T Consensus 475 ~-~a~~~a~~fs 485 (500)
T TIGR02918 475 E-YSYQIAEGFL 485 (500)
T ss_pred H-HHHHHHHhcC
Confidence 3 3344556655
No 89
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.70 E-value=9.3e-16 Score=187.78 Aligned_cols=334 Identities=17% Similarity=0.210 Sum_probs=192.8
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhh-cCcCceEEEEeeCCCCCc----c-cccc-Ccc--
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADE-QNLKFKLGFFLHIPFPPW----D-IFRL-FPW-- 616 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~-~~~~~kigfFLHiPfP~~----e-~fr~-lP~-- 616 (1460)
|+..+++.+.... ...|+|-.||||-.++|.+++..... .....+..|..|-+.+.. . .... .++
T Consensus 115 f~~~~~~~l~~~~------~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 115 FSRAALELLRRLG------WKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHhcC------CCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 6666666554321 12379999999998888888743211 013568889999752211 0 0000 000
Q ss_pred ------------HHHHHhhcccCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHH
Q psy775 617 ------------SDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQL 684 (1460)
Q Consensus 617 ------------r~eIL~~LL~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~ 684 (1460)
..-.-.++..||.|-.-++.|++..++.- . ...+.-....+..++.++|+|||.+.|.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-------~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~ 260 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-------F-GEGLDGLLRARAGKLSGILNGIDYDVWNPA 260 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-------C-CcchHHHHHhccCCeEEEeCCCcCcccCcc
Confidence 01111223344444444444443322110 0 000000012234678999999999888653
Q ss_pred HhcCccccccchhhhccccccccc--hhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHH
Q psy775 685 AQAAPRVIDTKQKIVLGVDRLDYT--KGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKA 762 (1460)
Q Consensus 685 ~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~A 762 (1460)
.... ... ..+..+.. ....+.+|++++++ ...++++|+++||+.+.||+...++|
T Consensus 261 ~~~~--~~~-------~~~~~~~~~~~~~k~~l~~~~g~~--------------~~~~~~~i~~vGrl~~~Kg~~~li~a 317 (476)
T cd03791 261 TDPH--LPA-------NYSADDLEGKAENKAALQEELGLP--------------VDPDAPLFGFVGRLTEQKGIDLLLEA 317 (476)
T ss_pred ccch--hhh-------cCCccccccHHHHHHHHHHHcCCC--------------cCCCCCEEEEEeeccccccHHHHHHH
Confidence 2210 000 00000000 01113344444432 12577899999999999999999999
Q ss_pred HHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEE
Q psy775 763 FETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVAL 842 (1460)
Q Consensus 763 fe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~v 842 (1460)
++++.+++ +.|+.+|.+. + .+.+++++++.+... .++++.+ .+.++...+|+.||+++
T Consensus 318 ~~~l~~~~------~~lvi~G~g~----~---~~~~~~~~~~~~~~~--------~v~~~~~-~~~~~~~~~~~~aDv~l 375 (476)
T cd03791 318 LPELLELG------GQLVILGSGD----P---EYEEALRELAARYPG--------RVAVLIG-YDEALAHLIYAGADFFL 375 (476)
T ss_pred HHHHHHcC------cEEEEEecCC----H---HHHHHHHHHHHhCCC--------cEEEEEe-CCHHHHHHHHHhCCEEE
Confidence 99987653 4566666542 1 344556655554311 2344444 45777788999999999
Q ss_pred ECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCC
Q psy775 843 VTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPP 922 (1460)
Q Consensus 843 vtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 922 (1460)
+||..||+|++.+|||+| +.|+|+|..+|..+.+
T Consensus 376 ~pS~~E~~gl~~lEAma~-----G~pvI~~~~gg~~e~v----------------------------------------- 409 (476)
T cd03791 376 MPSRFEPCGLTQMYAMRY-----GTVPIVRATGGLADTV----------------------------------------- 409 (476)
T ss_pred CCCCCCCCcHHHHHHhhC-----CCCCEECcCCCccceE-----------------------------------------
Confidence 999999999999999999 7889999999988721
Q ss_pred ceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCH--HHH-HHHHHHHHhHHHhcCHHHHHHHHHHHH
Q psy775 923 GVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPE--DER-TLRMNYLRKREKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 923 ~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~--~er-~~r~~~~~~~v~~~~~~~W~~~~l~~l 993 (1460)
.+.... ..-..++++.|.|+++++++|.+++++.. +.+ +.+.+. ....++++.-++++++-+
T Consensus 410 ----~~~~~~--~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y 474 (476)
T cd03791 410 ----IDYNED--TGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNA---MAQDFSWDRSAKEYLELY 474 (476)
T ss_pred ----eCCcCC--CCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH---hccCCChHHHHHHHHHHH
Confidence 111100 00125699999999999999999986432 222 222222 123456666666665543
No 90
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.70 E-value=1.5e-15 Score=174.47 Aligned_cols=266 Identities=17% Similarity=0.159 Sum_probs=178.4
Q ss_pred CCCEEEEeC-cchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCc--------HHH-HhhhccCceeeeccH
Q psy775 211 GTPLVWIHD-YHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWS--------DEI-LQGMLGCDMVGFHIE 280 (1460)
Q Consensus 211 ~gDvVwIHD-YhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r--------~ei-l~gLL~aDlIgF~t~ 280 (1460)
..|+|++|. ..+..++.....+. .+.++.+.+|-.||........... ..+ -..+..+|.+-+.+.
T Consensus 99 ~~D~v~~~~~~~~~~~~~~~~~~~----~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 99 RPDVIIATSPPLLIALAALLLARL----KGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred CCCEEEEcCChHHHHHHHHHHHHh----cCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECH
Confidence 479999998 44444444443322 2678999999887754322111111 111 123445788888888
Q ss_pred HhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchh--hhc-cCCeEEEEecCccccCCHH
Q psy775 281 DYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPR--VID-TKQKIVLGVDRLDYTKGLV 357 (1460)
Q Consensus 281 ~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~--~~~-~~~kvIL~VgRLd~~KGI~ 357 (1460)
.....+.. +.....++.++|+|+|...+......... ... .++.+++++||+.+.||+.
T Consensus 175 ~~~~~~~~------------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~k~~~ 236 (394)
T cd03794 175 GMREYLVR------------------RGVPPEKISVIPNGVDLELFKPPPADESLRKELGLDDKFVVLYAGNIGRAQGLD 236 (394)
T ss_pred HHHHHHHh------------------cCCCcCceEEcCCCCCHHHcCCccchhhhhhccCCCCcEEEEEecCcccccCHH
Confidence 77766552 11223467889999998877543221110 111 5678899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh
Q psy775 358 HRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 437 (1460)
Q Consensus 358 ~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~a 437 (1460)
.+++|+.++.+. |++ .|+.+|. ++....+++.+. .. +...+.+ .|.++++++..+|+.
T Consensus 237 ~l~~~~~~l~~~-~~~----~l~i~G~-----~~~~~~~~~~~~----~~-------~~~~v~~-~g~~~~~~~~~~~~~ 294 (394)
T cd03794 237 TLLEAAALLKDR-PDI----RFLIVGD-----GPEKEELKELAK----AL-------GLDNVTF-LGRVPKEELPELLAA 294 (394)
T ss_pred HHHHHHHHHhhc-CCe----EEEEeCC-----cccHHHHHHHHH----Hc-------CCCcEEE-eCCCChHHHHHHHHh
Confidence 999999998776 554 4555552 222223333211 11 1224555 479999999999999
Q ss_pred ccEEEEccCCCCC-----CcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHH
Q psy775 438 AAVALVTPLRDGM-----NLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDE 509 (1460)
Q Consensus 438 ADV~VvpSlrEGf-----nLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~e 509 (1460)
||++++||..|++ +...+|||+| |.|+|+|..+|..+.+.. |+++++.|+++++++|.++++++...
T Consensus 295 ~di~i~~~~~~~~~~~~~p~~~~Ea~~~-----G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~ 369 (394)
T cd03794 295 ADVGLVPLKPGPAFEGVSPSKLFEYMAA-----GKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEER 369 (394)
T ss_pred hCeeEEeccCcccccccCchHHHHHHHC-----CCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHH
Confidence 9999999999976 4457999999 778899999998888754 89999999999999999999766555
Q ss_pred HHHHHHHHHHHHhhcC
Q psy775 510 RTLRMNYLRKREKHMN 525 (1460)
Q Consensus 510 r~~R~~~l~~~v~~~~ 525 (1460)
++.+.++......+++
T Consensus 370 ~~~~~~~~~~~~~~~s 385 (394)
T cd03794 370 AEMGENGRRYVEEKFS 385 (394)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 5544444333333555
No 91
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.70 E-value=1.1e-15 Score=185.16 Aligned_cols=179 Identities=20% Similarity=0.230 Sum_probs=133.9
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCC-CCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH-LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~-~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
++++|+++||+.+.||+...++||.++.+++|+. +.++.|+.+|.+.... ..++.+++++++++.+.. .
T Consensus 236 ~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~---~~~~~~~L~~~~~~l~l~-------~ 305 (419)
T cd03806 236 RENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNED---DEKRVEDLKLLAKELGLE-------D 305 (419)
T ss_pred CCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcc---cHHHHHHHHHHHHHhCCC-------C
Confidence 4578999999999999999999999999988862 1247788777643221 123556677777665432 3
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.|.|.++.+++..+|+.||+++.||..||||++++||||| +.|+|+|..+|..+ -+|+|+.
T Consensus 306 ~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~-----G~pvIa~~~ggp~~-----~iv~~~~------- 368 (419)
T cd03806 306 KVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA-----GLIPLAHASGGPLL-----DIVVPWD------- 368 (419)
T ss_pred eEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc-----CCcEEEEcCCCCch-----heeeccC-------
Confidence 477889999999999999999999999999999999999999 77899999877543 0111110
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
++ ..+++++ |++++|++|.+++++++++++...++.++...
T Consensus 369 -----------------------------~g--------~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~ 409 (419)
T cd03806 369 -----------------------------GG--------PTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVK 409 (419)
T ss_pred -----------------------------CC--------CceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 11 2456764 99999999999999988777665555555555
Q ss_pred hcCHHH
Q psy775 979 VHDVNY 984 (1460)
Q Consensus 979 ~~~~~~ 984 (1460)
+++.+.
T Consensus 410 ~fs~~~ 415 (419)
T cd03806 410 RFSDEE 415 (419)
T ss_pred hhCHHH
Confidence 565543
No 92
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.70 E-value=1.7e-15 Score=181.59 Aligned_cols=280 Identities=15% Similarity=0.169 Sum_probs=187.4
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhh-cccCceeecccHhHHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQG-MLGCDMVGFHIEDYCLNFVDCCQ 646 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~-LL~aDlIGFqt~~yar~FL~~c~ 646 (1460)
|+|-+|+++..+.+..+. . ......+..+..|-.++..+... .....+.+- +-.+|.|-+.+....+++...
T Consensus 90 DiIh~~~~~~~~~~~~~~-~--~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 162 (398)
T cd03796 90 TIVHGHQAFSALAHEALL-H--ARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTVLR-- 162 (398)
T ss_pred CEEEECCCCchHHHHHHH-H--hhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHHHH--
Confidence 799999876543222111 0 12234567777886554222111 011112222 235666666655544433211
Q ss_pred HHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHH
Q psy775 647 RRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERF 726 (1460)
Q Consensus 647 rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~ 726 (1460)
.+....++.++|+|+|.+.|.+....
T Consensus 163 ---------------~~~~~~k~~vi~ngvd~~~f~~~~~~--------------------------------------- 188 (398)
T cd03796 163 ---------------ASLDPERVSVIPNAVDSSDFTPDPSK--------------------------------------- 188 (398)
T ss_pred ---------------hCCChhhEEEEcCccCHHHcCCCccc---------------------------------------
Confidence 11234567889999998777431000
Q ss_pred HHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q psy775 727 VQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR 806 (1460)
Q Consensus 727 ~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~ 806 (1460)
...++++|+++||+.+.||+..+++|+..+.+++|++ .|+.+|.+ +.. +++++++++
T Consensus 189 ----------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~----~l~i~G~g-----~~~----~~l~~~~~~ 245 (398)
T cd03796 189 ----------RDNDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNV----RFIIGGDG-----PKR----ILLEEMREK 245 (398)
T ss_pred ----------CCCCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCE----EEEEEeCC-----chH----HHHHHHHHH
Confidence 0145789999999999999999999999988888875 56666643 222 334445544
Q ss_pred HhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhh
Q psy775 807 INGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALI 886 (1460)
Q Consensus 807 IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~ 886 (1460)
.+. ...+.+.|.++.+++.++|+.||++++||..||||++.+||||| +.|+|+|..+|..+.+
T Consensus 246 ~~l-------~~~v~~~G~~~~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~-----G~PVI~s~~gg~~e~i----- 308 (398)
T cd03796 246 YNL-------QDRVELLGAVPHERVRDVLVQGHIFLNTSLTEAFCIAIVEAASC-----GLLVVSTRVGGIPEVL----- 308 (398)
T ss_pred hCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEeCChhhccCHHHHHHHHc-----CCCEEECCCCCchhhe-----
Confidence 322 23366789999999999999999999999999999999999999 7899999999877611
Q ss_pred cCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHH
Q psy775 887 CNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDER 966 (1460)
Q Consensus 887 vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er 966 (1460)
.+ .+.++++| |.++++++|.++++++.+.+
T Consensus 309 ----------------------------------------~~---------~~~~~~~~-~~~~l~~~l~~~l~~~~~~~ 338 (398)
T cd03796 309 ----------------------------------------PP---------DMILLAEP-DVESIVRKLEEAISILRTGK 338 (398)
T ss_pred ----------------------------------------eC---------CceeecCC-CHHHHHHHHHHHHhChhhhh
Confidence 11 12345655 99999999999999766554
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHHhhhhh
Q psy775 967 TLRMNYLRKREKVHDVNYWMRSFLKGMGTLIT 998 (1460)
Q Consensus 967 ~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 998 (1460)
....+...+....+++..-++++++-+++...
T Consensus 339 ~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 339 HDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 44455545566778999999998888877664
No 93
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.69 E-value=3.7e-15 Score=170.80 Aligned_cols=238 Identities=19% Similarity=0.199 Sum_probs=164.1
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|++|.+..+..+.+...+ ..+.++.+.+|=.++. .+....+... .|.+-..+....+.|.+.
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~----~~~~~~i~~~hd~~~~------~~~~~~~~~~---~d~ii~~s~~~~~~~~~~- 161 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAAR----DRGIPIVLTLHDYWLI------CPRQGLFKKG---GDAVIAPSRFLLDRYVAN- 161 (359)
T ss_pred CCCEEEECCccchHHHHHHHHH----hcCCCEEEEEeeeeee------cchhhhhccC---CCEEEEeCHHHHHHHHHc-
Confidence 4699999987554443322111 1247888999854432 2222222221 277777776555555431
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhC
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 370 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~ 370 (1460)
.....++.++|+|+|...+..... ....++.+++++||+.+.||+..+++|+..+.+
T Consensus 162 -----------------~~~~~~~~vi~n~~~~~~~~~~~~----~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~-- 218 (359)
T cd03823 162 -----------------GLFAEKISVIRNGIDLDRAKRPRR----APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR-- 218 (359)
T ss_pred -----------------CCCccceEEecCCcChhhcccccc----CCCCCceEEEEEecCccccCHHHHHHHHHHHHh--
Confidence 111347889999999987754321 111456789999999999999999999998866
Q ss_pred CCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC-CCC
Q psy775 371 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-RDG 449 (1460)
Q Consensus 371 P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl-rEG 449 (1460)
++ +.|+.+|...... ...... + ..+.+.+.|.++.+++..+|+.||++++||. .||
T Consensus 219 ~~----~~l~i~G~~~~~~-----~~~~~~-------~-------~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~ 275 (359)
T cd03823 219 GD----IELVIVGNGLELE-----EESYEL-------E-------GDPRVEFLGAYPQEEIDDFYAEIDVLVVPSIWPEN 275 (359)
T ss_pred cC----cEEEEEcCchhhh-----HHHHhh-------c-------CCCeEEEeCCCCHHHHHHHHHhCCEEEEcCcccCC
Confidence 44 4566666332111 111111 1 1123556799999999999999999999998 799
Q ss_pred CCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHH
Q psy775 450 MNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 450 fnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R 513 (1460)
+|++++|||+| |.|+|+|+.+|..+.+.. |++++|.|+++++++|.++++.+...+..+
T Consensus 276 ~~~~~~Ea~a~-----G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~ 337 (359)
T cd03823 276 FPLVIREALAA-----GVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLR 337 (359)
T ss_pred CChHHHHHHHC-----CCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHH
Confidence 99999999999 677899999888877753 899999999999999999999655444433
No 94
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.68 E-value=2.3e-15 Score=174.30 Aligned_cols=262 Identities=16% Similarity=0.157 Sum_probs=169.8
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
..|+|++|....+.....+... .+.+..+.+|...-....+... .....-..+..||.|-..+..+.+.+..
T Consensus 83 ~~Dii~~~~~~~~~~~~~~~~~-----~~~~~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~d~vi~~s~~~~~~~~~-- 154 (357)
T cd03795 83 KADVIHLHFPNPLADLALLLLP-----RKKPVVVHWHSDIVKQKLLLKL-YRPLQRRFLRRADAIVATSPNYAETSPV-- 154 (357)
T ss_pred CCCEEEEecCcchHHHHHHHhc-----cCceEEEEEcChhhccchhhhh-hhHHHHHHHHhcCEEEeCcHHHHHHHHH--
Confidence 4789999986544332222211 2467778888533211110000 0111112334467776666655543332
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh--ccCCeEEEEecCccccCCHHHHHHHHHHHHH
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI--DTKQKIVLGVDRLDYTKGLVHRLKAFETLLE 368 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~--~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~ 368 (1460)
......++.++|+|+|.+.+........... ..+.++|+++||+.+.||+..+++|+.++.
T Consensus 155 ----------------~~~~~~~~~~i~~gi~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 155 ----------------LRRFRDKVRVIPLGLDPARYPRPDALEEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ----------------hcCCccceEEecCCCChhhcCCcchhhhHhhcCCCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 0111246788999999987764322111111 156788999999999999999999998873
Q ss_pred hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC--
Q psy775 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-- 446 (1460)
Q Consensus 369 ~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl-- 446 (1460)
++.++.+|.+ +....++ +++.+.+ ..+-+.+.|.++++++..+|+.||++++||.
T Consensus 218 -------~~~l~i~G~g-----~~~~~~~----~~~~~~~-------~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~ 274 (357)
T cd03795 218 -------DAPLVIVGEG-----PLEAELE----ALAAALG-------LLDRVRFLGRLDDEEKAALLAACDVFVFPSVER 274 (357)
T ss_pred -------CcEEEEEeCC-----hhHHHHH----HHHHhcC-------CcceEEEcCCCCHHHHHHHHHhCCEEEeCCccc
Confidence 3556666632 2222333 3332222 1233566799999999999999999999996
Q ss_pred CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc--c--cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Q psy775 447 RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH--E--ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 522 (1460)
Q Consensus 447 rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~--~--allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~ 522 (1460)
.||||++++|||+| |.|+|+|+.+|..+.+. + |++++|.|+++++++|.++++++...++++.++.....+
T Consensus 275 ~e~~g~~~~Ea~~~-----g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 275 SEAFGIVLLEAMAF-----GKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAARERAEE 349 (357)
T ss_pred ccccchHHHHHHHc-----CCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence 59999999999999 67779999888877663 2 899999999999999999999776666555544433334
Q ss_pred hcC
Q psy775 523 HMN 525 (1460)
Q Consensus 523 ~~~ 525 (1460)
.++
T Consensus 350 ~~s 352 (357)
T cd03795 350 EFT 352 (357)
T ss_pred hcc
Confidence 333
No 95
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.68 E-value=1.7e-15 Score=182.96 Aligned_cols=149 Identities=17% Similarity=0.089 Sum_probs=109.1
Q ss_pred EEEEEeecccCchhhhhhhccchhhh-ccCCeEEEEecC-c-cccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCC
Q psy775 312 VRIRPLPIAIPYERFVQLAQAAPRVI-DTKQKIVLGVDR-L-DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRT 388 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~~~~~~-~~~~kvIL~VgR-L-d~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~ 388 (1460)
.++.++|+|||++.+...... .... ..++++|++|+| + ++.||+..+++|+.++ .+ ++.|+.+|.....
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~-~~~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~ivG~g~~~ 283 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAEL-PPVRETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHTFGKFSPF 283 (405)
T ss_pred CCEEEeCCCcCcccccccccc-cccccCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEEEcCCCcc
Confidence 478889999997543221111 0111 146778999999 4 4789999999999875 23 3567767643210
Q ss_pred ChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC-CCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCC
Q psy775 389 DVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC-ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPG 467 (1460)
Q Consensus 389 ~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~-v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~G 467 (1460)
. . ..+.++ |. .+.+++..+|++||+||+||.+||||+|++||||| |.
T Consensus 284 ~------------------~--------~~v~~~-g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~-----G~ 331 (405)
T PRK10125 284 T------------------A--------GNVVNH-GFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI-----GV 331 (405)
T ss_pred c------------------c--------cceEEe-cCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc-----CC
Confidence 0 0 013333 44 36789999999999999999999999999999999 67
Q ss_pred eEEEcCCCCchhccc--ccEEECCCCHHHHHHHHH
Q psy775 468 VLIVSPFAGAGEQMH--EALICNPYEIDAAAEVIH 500 (1460)
Q Consensus 468 vlVlSe~aGaa~~L~--~allVNP~D~~elA~AI~ 500 (1460)
|||+|..+|..+.+. .|++|+|.|++++|+++.
T Consensus 332 PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~ 366 (405)
T PRK10125 332 PVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSK 366 (405)
T ss_pred CEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccC
Confidence 789999999877774 399999999999998653
No 96
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.68 E-value=4.4e-15 Score=168.83 Aligned_cols=265 Identities=18% Similarity=0.145 Sum_probs=175.6
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCC-CcHHH-HhhhccCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFP-WSDEI-LQGMLGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP-~r~ei-l~gLL~aDlIgF~t~~yar~FL~ 288 (1460)
..|+|++|..+..++..+..+... ..++.+.+|...+......... ....+ -..+-.+|.+-+.+....+.+.+
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 155 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAG----VPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALK 155 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcC----CCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHH
Confidence 479999998877777666654322 4567777775432211100000 00011 11223468888888777766655
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLE 368 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~ 368 (1460)
. +. .....++.+.|+|+|.+.+...... ...++..++++||+.+.||+..+++|+..+.+
T Consensus 156 ~-----~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 215 (359)
T cd03808 156 L-----GI-----------IKKKKTVLIPGSGVDLDRFSPSPEP----IPEDDPVFLFVARLLKDKGIDELLEAARILKA 215 (359)
T ss_pred h-----cC-----------CCcCceEEecCCCCChhhcCccccc----cCCCCcEEEEEeccccccCHHHHHHHHHHHHh
Confidence 1 00 0012456678999998877543211 12456789999999999999999999999988
Q ss_pred hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCC
Q psy775 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD 448 (1460)
Q Consensus 369 ~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrE 448 (1460)
++|++ .|+.+|....... .... ++.+.+. .+.+.+.|. .+++..+|+.||++++||..|
T Consensus 216 ~~~~~----~l~i~G~~~~~~~-----~~~~---~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adi~i~ps~~e 274 (359)
T cd03808 216 KGPNV----RLLLVGDGDEENP-----AAIL---EIEKLGL-------EGRVEFLGF--RDDVPELLAAADVFVLPSYRE 274 (359)
T ss_pred cCCCe----EEEEEcCCCcchh-----hHHH---HHHhcCC-------cceEEEeec--cccHHHHHHhccEEEecCccc
Confidence 77764 4666664432211 1111 1112111 123444566 678999999999999999999
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
|||++++|||+| |.|+|+|..+|..+.+. .|++++|.|+++++++|.+++..++..+++..++......+++
T Consensus 275 ~~~~~~~Ea~~~-----G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s 349 (359)
T cd03808 275 GLPRVLLEAMAM-----GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFD 349 (359)
T ss_pred CcchHHHHHHHc-----CCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999 67789999998888874 2899999999999999999988776655555555444455555
No 97
>PHA01633 putative glycosyl transferase group 1
Probab=99.68 E-value=7.8e-16 Score=180.68 Aligned_cols=185 Identities=19% Similarity=0.248 Sum_probs=133.3
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+..++++|||+++.||+..+++||+++.+++|++..++.++.+|. . ++. +.+. . ..
T Consensus 146 ~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~------~-------~~~----~l~l----~--~~ 202 (335)
T PHA01633 146 PDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH------K-------QFT----QLEV----P--AN 202 (335)
T ss_pred CCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH------H-------HHH----HcCC----C--Cc
Confidence 4567899999999999999999999999999999877777775541 1 111 1111 1 12
Q ss_pred EEEEc--CCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhh--hhhcCcccchh
Q psy775 819 IRYIY--GCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE--ALICNPYEIDA 894 (1460)
Q Consensus 819 vv~~~--g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~--~l~vnP~~~~~ 894 (1460)
|.+.. |.++.+++.++|+.||++|+||..||||++++||||| +.|+|+|..+|..++.++ ..+|.+.+.++
T Consensus 203 V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~-----G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 203 VHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM-----GTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred EEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc-----CCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 33332 6778999999999999999999999999999999999 789999999998884331 12222222221
Q ss_pred hhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy775 895 AAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 974 (1460)
Q Consensus 895 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~ 974 (1460)
.+++ ..| .+..++++|++++|++|.+++.++..+ .|...++
T Consensus 278 ~~~~-------------------------------~~g------~g~~~~~~d~~~la~ai~~~~~~~~~~--~~~~~~~ 318 (335)
T PHA01633 278 YYDK-------------------------------EHG------QKWKIHKFQIEDMANAIILAFELQDRE--ERSMKLK 318 (335)
T ss_pred hcCc-------------------------------ccC------ceeeecCCCHHHHHHHHHHHHhccChh--hhhHHHH
Confidence 1110 011 246899999999999999998876432 2344457
Q ss_pred hHHHhcCHHHHHHHHH
Q psy775 975 KREKVHDVNYWMRSFL 990 (1460)
Q Consensus 975 ~~v~~~~~~~W~~~~l 990 (1460)
+..++++++.-.++++
T Consensus 319 ~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 319 ELAKKYDIRNLYTRFL 334 (335)
T ss_pred HHHHhcCHHHHHHHhh
Confidence 8888888887777654
No 98
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.68 E-value=9.4e-16 Score=194.65 Aligned_cols=186 Identities=19% Similarity=0.206 Sum_probs=133.2
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCC---ChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRT---DVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~---~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++++|++|+|+++.||+..+++||.+.-+.. ..+.|+.+|.+... ...+..+..+++.+++.+.+-.
T Consensus 548 ~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~----- 618 (784)
T TIGR02470 548 PNKPIIFSMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLH----- 618 (784)
T ss_pred CCCcEEEEEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCC-----
Confidence 57889999999999999999999998764333 24678888865321 1122223445666677665422
Q ss_pred CccEEEEcCCC-CHHHHHHHHH----HccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcc
Q psy775 816 WSPIRYIYGCI-SQDELASFYR----DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY 890 (1460)
Q Consensus 816 ~~pvv~~~g~v-~~eel~Aly~----~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~ 890 (1460)
..+.+.|.. +..++..+|+ .+||||.||.+|||||+++||||| |.|+|+|..+|..+.
T Consensus 619 --g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAc-----GlPVVAT~~GG~~Ei---------- 681 (784)
T TIGR02470 619 --GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTC-----GLPTFATRFGGPLEI---------- 681 (784)
T ss_pred --CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHc-----CCCEEEcCCCCHHHH----------
Confidence 225566653 5555556665 247999999999999999999999 789999999998871
Q ss_pred cchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHh----CCCHHHH
Q psy775 891 EIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRAL----TMPEDER 966 (1460)
Q Consensus 891 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL----~m~~~er 966 (1460)
|.++ ..+++|+|.|++++|++|.+++ +.+...+
T Consensus 682 -----------------------------------V~dg--------~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~ 718 (784)
T TIGR02470 682 -----------------------------------IQDG--------VSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQ 718 (784)
T ss_pred -----------------------------------hcCC--------CcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 1222 3469999999999999999886 3444445
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHH
Q psy775 967 TLRMNYLRKREKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 967 ~~r~~~~~~~v~~~~~~~W~~~~l~~l 993 (1460)
+...+++.+..+.+++...+++.+.-.
T Consensus 719 ~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 719 KISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 555555555557789888888876554
No 99
>PLN02580 trehalose-phosphatase
Probab=99.68 E-value=3.1e-17 Score=193.91 Aligned_cols=115 Identities=32% Similarity=0.477 Sum_probs=100.7
Q ss_pred hhhhhcCchhhhhhcccCCCcCCCCCCCCC-CCC--CCCChhhHHHHHHHhhcCCCcEEEEEecCCCCCCCCCCCCCcCC
Q psy775 1342 DFDEYLSKNELLILKGMGTLITEDGDDVLP-TTM--QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVL 1418 (1460)
Q Consensus 1342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~~P~~a~~ 1418 (1460)
|--.--|+.++|..|++++..++.+.+..+ .|+ +|++++.|+++.+. +++++++|||||||||+||+++|++|.+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~al~~~~~~~~~--~~~k~~~LfLDyDGTLaPIv~~Pd~A~~ 142 (384)
T PLN02580 65 DAMKSSSPPRKKLNKDFNVELASPDTDFAYRTWMLKYPSALTSFEQIANF--AKGKKIALFLDYDGTLSPIVDDPDRALM 142 (384)
T ss_pred hhhhccCCCccccccccccccccccchHHHHHHHHhCcHHHHHHHHHHHH--hhcCCeEEEEecCCccCCCCCCcccccC
Confidence 444445777888888888777777766555 787 99999999998765 5678999999999999999999999999
Q ss_pred ChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCCcccC
Q psy775 1419 PEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYA 1460 (1460)
Q Consensus 1419 ~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~~~ya 1460 (1460)
+++++++|++||+++ +|||||||++++|++++++++++||
T Consensus 143 s~~~~~aL~~La~~~--~VAIVSGR~~~~L~~~l~~~~l~la 182 (384)
T PLN02580 143 SDAMRSAVKNVAKYF--PTAIISGRSRDKVYELVGLTELYYA 182 (384)
T ss_pred CHHHHHHHHHHhhCC--CEEEEeCCCHHHHHHHhCCCCccEE
Confidence 999999999999996 7999999999999999999999886
No 100
>PLN00142 sucrose synthase
Probab=99.68 E-value=1.2e-15 Score=193.62 Aligned_cols=186 Identities=17% Similarity=0.152 Sum_probs=133.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCC-CCC--hhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS-RTD--VKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~ps-r~~--~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++++|++|||+++.||+..+++||.++.+..|+ +.|+.+|.+. ... ..+..+..+++.+++++.+-.
T Consensus 571 ~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~----- 641 (815)
T PLN00142 571 RKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK----- 641 (815)
T ss_pred CCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC-----
Confidence 4577999999999999999999999987665554 5688787652 111 111222234566666655432
Q ss_pred CccEEEEcC----CCCHHHHHHHHH-HccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcc
Q psy775 816 WSPIRYIYG----CISQDELASFYR-DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY 890 (1460)
Q Consensus 816 ~~pvv~~~g----~v~~eel~Aly~-~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~ 890 (1460)
..+.+.| ..+.++++.+|+ ++|+||.||.+||||++++||||| +.|+|+|..+|..+.
T Consensus 642 --~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~-----GlPVVATdvGG~~EI---------- 704 (815)
T PLN00142 642 --GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTC-----GLPTFATCQGGPAEI---------- 704 (815)
T ss_pred --CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHc-----CCCEEEcCCCCHHHH----------
Confidence 1133433 456678888877 479999999999999999999999 789999999997771
Q ss_pred cchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHh----CCCHHHH
Q psy775 891 EIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRAL----TMPEDER 966 (1460)
Q Consensus 891 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL----~m~~~er 966 (1460)
|.++ ..+++|+|.|++++|++|..++ +.+...+
T Consensus 705 -----------------------------------V~dG--------~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~ 741 (815)
T PLN00142 705 -----------------------------------IVDG--------VSGFHIDPYHGDEAANKIADFFEKCKEDPSYWN 741 (815)
T ss_pred -----------------------------------hcCC--------CcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 1222 3469999999999999998765 4444445
Q ss_pred HHHHHHHHhHHHhcCHHHHHHHHHHHH
Q psy775 967 TLRMNYLRKREKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 967 ~~r~~~~~~~v~~~~~~~W~~~~l~~l 993 (1460)
+...++..+..+.+++...++++++-.
T Consensus 742 ~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 742 KISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 555555455557789888888877654
No 101
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.67 E-value=4.9e-15 Score=175.55 Aligned_cols=179 Identities=18% Similarity=0.236 Sum_probs=136.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhC---CCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHH-HhccCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH---PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR-INGRFTTP 814 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~---P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~-IN~~~~~~ 814 (1460)
.++.+++++||+.+.||+...++|++++.+++ |+ +.|+.+|.+... ..+..++.+++++++++ .+.
T Consensus 209 ~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~----~~l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l----- 278 (392)
T cd03805 209 SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKN----VRLVIAGGYDPR-VAENVEYLEELQRLAEELLLL----- 278 (392)
T ss_pred CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccC----eEEEEEcCCCCC-CchhHHHHHHHHHHHHHhcCC-----
Confidence 56788999999999999999999999998877 55 567777765322 22233455666666655 322
Q ss_pred CCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchh
Q psy775 815 NWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDA 894 (1460)
Q Consensus 815 ~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~ 894 (1460)
..-+.|.|.++.+++..+|+.||++++||..||||++++||||| +.|+|+|..+|..+.+
T Consensus 279 --~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~-----G~PvI~s~~~~~~e~i------------- 338 (392)
T cd03805 279 --EDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYA-----GKPVIACNSGGPLETV------------- 338 (392)
T ss_pred --CceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHc-----CCCEEEECCCCcHHHh-------------
Confidence 23477889999999999999999999999999999999999999 7899999988866611
Q ss_pred hhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy775 895 AAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 974 (1460)
Q Consensus 895 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~ 974 (1460)
.++ ..+++++| |++++|++|.++++.+...++.+.+...
T Consensus 339 --------------------------------~~~--------~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 339 --------------------------------VDG--------ETGFLCEP-TPEEFAEAMLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred --------------------------------ccC--------CceEEeCC-CHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 111 24577877 9999999999999987655555555433
Q ss_pred hHHHhcCHHHHHHH
Q psy775 975 KREKVHDVNYWMRS 988 (1460)
Q Consensus 975 ~~v~~~~~~~W~~~ 988 (1460)
....++++..++++
T Consensus 378 ~~~~~~s~~~~~~~ 391 (392)
T cd03805 378 RVKEKFSTEAFAER 391 (392)
T ss_pred HHHHhcCHHHHhhh
Confidence 34466777777654
No 102
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.67 E-value=7.6e-15 Score=170.16 Aligned_cols=173 Identities=23% Similarity=0.304 Sum_probs=133.5
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++++++||+.+.||+...++|+.++.+++|++ .|+.+|.+. . .+++++.+.+.|. .+
T Consensus 186 ~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~----~l~i~G~g~-----~----~~~~~~~~~~~~~-------~~ 245 (360)
T cd04951 186 NDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDI----KLLIAGDGP-----L----RATLERLIKALGL-------SN 245 (360)
T ss_pred CCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCe----EEEEEcCCC-----c----HHHHHHHHHhcCC-------CC
Confidence 56789999999999999999999999999888864 566666332 1 2334444444332 23
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|.. +++..+|+.||++++||..||||++++|||+| +.|+|+|..+|..+.+.
T Consensus 246 ~v~~~g~~--~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~-----G~PvI~~~~~~~~e~i~---------------- 302 (360)
T cd04951 246 RVKLLGLR--DDIAAYYNAADLFVLSSAWEGFGLVVAEAMAC-----ELPVVATDAGGVREVVG---------------- 302 (360)
T ss_pred cEEEeccc--ccHHHHHHhhceEEecccccCCChHHHHHHHc-----CCCEEEecCCChhhEec----------------
Confidence 35566654 57889999999999999999999999999999 78999999887666110
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
+.+..++|.|+++++++|.+++++++..+....+.......
T Consensus 303 ---------------------------------------~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~~~ 343 (360)
T cd04951 303 ---------------------------------------DSGLIVPISDPEALANKIDEILKMSGEERDIIGARRERIVK 343 (360)
T ss_pred ---------------------------------------CCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 13478899999999999999998777776665555445567
Q ss_pred hcCHHHHHHHHHHHH
Q psy775 979 VHDVNYWMRSFLKGM 993 (1460)
Q Consensus 979 ~~~~~~W~~~~l~~l 993 (1460)
.++++.+++++.+-+
T Consensus 344 ~~s~~~~~~~~~~~y 358 (360)
T cd04951 344 KFSINSIVQQWLTLY 358 (360)
T ss_pred hcCHHHHHHHHHHHh
Confidence 789999988887654
No 103
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.67 E-value=4.1e-15 Score=168.31 Aligned_cols=252 Identities=17% Similarity=0.103 Sum_probs=168.8
Q ss_pred CCCEEEEeCc-chhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDY-HLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDY-hL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~ 289 (1460)
.-|+|++|++ ...++..+.++ . +.++.+.+|-.++..... ..+........+..+|.+-+.+......+.+.
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-----~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 153 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-----L-GTKLIVWEHNSLSLELKR-KLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL 153 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-----c-CCceEEEEcCcchhhhcc-chhHHHHHHhhccccceEEEeccchhhhHHHh
Confidence 4699999998 44444433332 1 578899999877543211 11111123444556788887777665555442
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh-ccCCeEEEEecCccccCCHHHHHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI-DTKQKIVLGVDRLDYTKGLVHRLKAFETLLE 368 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~-~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~ 368 (1460)
. .....++.++|+|+|.+.+........... ..++.+++++||+.+.||+..+++|+..+.+
T Consensus 154 ~-----------------~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~ 216 (353)
T cd03811 154 L-----------------GIPPDKIEVIYNPIDIEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRK 216 (353)
T ss_pred h-----------------cCCccccEEecCCcChhhcCcccchhhhcCCCCCceEEEEEecchhhcChHHHHHHHHHhhh
Confidence 1 112356788999999887765432211001 1567889999999999999999999999988
Q ss_pred hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCC
Q psy775 369 KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD 448 (1460)
Q Consensus 369 ~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrE 448 (1460)
++++. .|+.+|.+ +...+++ +.+.+.+. .+.+.+.|.. +++..+|+.||++++||..|
T Consensus 217 ~~~~~----~l~i~G~~-----~~~~~~~----~~~~~~~~-------~~~v~~~g~~--~~~~~~~~~~d~~i~ps~~e 274 (353)
T cd03811 217 EGPDA----RLVILGDG-----PLREELE----ALAKELGL-------ADRVHFLGFQ--SNPYPYLKAADLFVLSSRYE 274 (353)
T ss_pred cCCCc----eEEEEcCC-----ccHHHHH----HHHHhcCC-------CccEEEeccc--CCHHHHHHhCCEEEeCcccC
Confidence 76664 46555532 2222333 33333332 2334555764 46789999999999999999
Q ss_pred CCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHH---HHHHHHHcCCCHHHHHHH
Q psy775 449 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAA---AEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 449 GfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~el---A~AI~~aL~m~~~er~~R 513 (1460)
|||++++|||+| |.|+|+|+.+|..+.+.+ |++++|.|.+++ +++|...+..+...++.+
T Consensus 275 ~~~~~~~Ea~~~-----G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 340 (353)
T cd03811 275 GFPNVLLEAMAL-----GTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDPELRERLA 340 (353)
T ss_pred CCCcHHHHHHHh-----CCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCChHHHHHHH
Confidence 999999999999 677899999988887743 899999999999 666667666555444433
No 104
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.67 E-value=3.9e-15 Score=182.51 Aligned_cols=175 Identities=18% Similarity=0.263 Sum_probs=132.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
+++++|+++||+.+.||+...++|+++ .|+ +.|+.+|.+ + +++++++++.. . +
T Consensus 261 ~~~~~i~~vGrl~~~K~~~~li~a~~~----~~~----~~l~ivG~G-----~----~~~~l~~~~~~-------~---~ 313 (465)
T PLN02871 261 PEKPLIVYVGRLGAEKNLDFLKRVMER----LPG----ARLAFVGDG-----P----YREELEKMFAG-------T---P 313 (465)
T ss_pred CCCeEEEEeCCCchhhhHHHHHHHHHh----CCC----cEEEEEeCC-----h----HHHHHHHHhcc-------C---C
Confidence 467889999999999999999988765 354 467777732 2 23445544431 1 1
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
+.|.|.++.+|+..+|+.||++|+||..|||+++++||||| +.|+|+|..+|..+.+ ++.
T Consensus 314 -V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~-----G~PVI~s~~gg~~eiv------~~~-------- 373 (465)
T PLN02871 314 -TVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEAMAS-----GVPVVAARAGGIPDII------PPD-------- 373 (465)
T ss_pred -eEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHHHHc-----CCCEEEcCCCCcHhhh------hcC--------
Confidence 56789999999999999999999999999999999999999 7899999998876611 110
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
- .-.++++++|.|++++|++|.++++.+...++++ +..++++.
T Consensus 374 -------------------------------~-----~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~-~~a~~~~~ 416 (465)
T PLN02871 374 -------------------------------Q-----EGKTGFLYTPGDVDDCVEKLETLLADPELRERMG-AAAREEVE 416 (465)
T ss_pred -------------------------------C-----CCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH-HHHHHHHH
Confidence 0 0145799999999999999999998654444444 44467788
Q ss_pred hcCHHHHHHHHHHH-Hhhhh
Q psy775 979 VHDVNYWMRSFLKG-MGTLI 997 (1460)
Q Consensus 979 ~~~~~~W~~~~l~~-l~~~~ 997 (1460)
++++...++++++. ...++
T Consensus 417 ~fsw~~~a~~l~~~~Y~~~~ 436 (465)
T PLN02871 417 KWDWRAATRKLRNEQYSAAI 436 (465)
T ss_pred hCCHHHHHHHHHHHHHHHHH
Confidence 89999999999885 44433
No 105
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.66 E-value=6.6e-15 Score=172.18 Aligned_cols=172 Identities=20% Similarity=0.238 Sum_probs=132.5
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
+++.++++||+.+.||+...++|+..+.+++|++ .|+.+|.+ + +.+++++++++.+ +.+.
T Consensus 187 ~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~ivG~g-----~----~~~~~~~~~~~~~-------~~~~ 246 (367)
T cd05844 187 RPPRILFVGRFVEKKGPLLLLEAFARLARRVPEV----RLVIIGDG-----P----LLAALEALARALG-------LGGR 246 (367)
T ss_pred CCcEEEEEEeeccccChHHHHHHHHHHHHhCCCe----EEEEEeCc-----h----HHHHHHHHHHHcC-------CCCe
Confidence 3567899999999999999999999998888874 57766632 1 2345555555432 2234
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCC------ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccch
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPL------RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID 893 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSl------rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~ 893 (1460)
+.+.|.++.+++..+|+.||++++||. .|||+++++|||+| +.|+|+|+.+|..+.+
T Consensus 247 v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~-----G~PvI~s~~~~~~e~i------------ 309 (367)
T cd05844 247 VTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQAS-----GVPVVATRHGGIPEAV------------ 309 (367)
T ss_pred EEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHc-----CCCEEEeCCCCchhhe------------
Confidence 678899999999999999999999997 59999999999999 7899999998876611
Q ss_pred hhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q psy775 894 AAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 973 (1460)
Q Consensus 894 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~ 973 (1460)
. ....+++++|.|+++++++|.++++.+....+.+.+.
T Consensus 310 ---------------------------------~--------~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~a- 347 (367)
T cd05844 310 ---------------------------------E--------DGETGLLVPEGDVAALAAALGRLLADPDLRARMGAAG- 347 (367)
T ss_pred ---------------------------------e--------cCCeeEEECCCCHHHHHHHHHHHHcCHHHHHHHHHHH-
Confidence 1 1135689999999999999999998655444444443
Q ss_pred HhHH-HhcCHHHHHHHHH
Q psy775 974 RKRE-KVHDVNYWMRSFL 990 (1460)
Q Consensus 974 ~~~v-~~~~~~~W~~~~l 990 (1460)
++++ ..++++.+++++.
T Consensus 348 ~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 348 RRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHCCHHHHHHHHh
Confidence 5555 5788888877664
No 106
>PHA01630 putative group 1 glycosyl transferase
Probab=99.66 E-value=3.7e-15 Score=175.49 Aligned_cols=174 Identities=13% Similarity=0.071 Sum_probs=124.9
Q ss_pred EEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChH
Q psy775 312 VRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVK 391 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ 391 (1460)
.++.++|+|||++.|.+.... ..+..++.++||+.+.||++.+|+|++++.+++|++ .++.+|.. .
T Consensus 118 ~~i~vIpNGVd~~~f~~~~~~-----~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~----~llivG~~-----~ 183 (331)
T PHA01630 118 QPIYVIPHNLNPRMFEYKPKE-----KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDF----YFLIKSSN-----M 183 (331)
T ss_pred CCEEEECCCCCHHHcCCCccc-----cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCE----EEEEEeCc-----c
Confidence 367789999999888543211 123456667889999999999999999998887764 46666621 1
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEE
Q psy775 392 EYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV 471 (1460)
Q Consensus 392 ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVl 471 (1460)
. +. ++. + + .+ +.+.++++++..+|+.||++++||..||||++++||||| |.|+|+
T Consensus 184 ~--~~--~l~------~--~--~~------~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~-----G~PVIa 238 (331)
T PHA01630 184 L--DP--RLF------G--L--NG------VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL-----GLDVVV 238 (331)
T ss_pred c--ch--hhc------c--c--cc------eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc-----CCCEEE
Confidence 0 11 110 1 0 01 135689999999999999999999999999999999999 677899
Q ss_pred cCCCCchhcccc---cEE--------------------ECCCCHHHHHHHHHHHcCCC--HHHHHHHHHHHHHHHhhcC
Q psy775 472 SPFAGAGEQMHE---ALI--------------------CNPYEIDAAAEVIHRALTMP--EDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 472 Se~aGaa~~L~~---all--------------------VNP~D~~elA~AI~~aL~m~--~~er~~R~~~l~~~v~~~~ 525 (1460)
|..+|..+.+.+ |++ ++| |.+++++++.++|.++ ++.+....++.+...++++
T Consensus 239 s~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs 316 (331)
T PHA01630 239 TEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYS 316 (331)
T ss_pred eCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCC
Confidence 998887776643 444 455 7888999999999875 4444444444444555655
No 107
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.65 E-value=2.5e-15 Score=184.91 Aligned_cols=181 Identities=19% Similarity=0.206 Sum_probs=133.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++|+++||+.+.||+...++|++.+.++.|++ .|+.+|.+. .+ ..+.+++++++++.|.. .
T Consensus 291 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~-~~----~~~~~e~~~li~~l~l~-------~ 354 (475)
T cd03813 291 KEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD-ED----PEYAEECRELVESLGLE-------D 354 (475)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC-cC----hHHHHHHHHHHHHhCCC-------C
Confidence 45678999999999999999999999998888874 566666432 11 24566777777776543 2
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.|.| .+++..+|+.||++++||..|||+++++||||| +.|+|+|..+|+.+.+. ..+-
T Consensus 355 ~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~-----G~PVVatd~g~~~elv~------~~~~------ 414 (475)
T cd03813 355 NVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAA-----GIPVVATDVGSCRELIE------GADD------ 414 (475)
T ss_pred eEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHc-----CCCEEECCCCChHHHhc------CCcc------
Confidence 366776 668899999999999999999999999999999 78999999988776221 0000
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
+..| ..+++++|.|++++|++|.++++.+...++...++ ++++.
T Consensus 415 ------------------------------~~~g-----~~G~lv~~~d~~~la~ai~~ll~~~~~~~~~~~~a-~~~v~ 458 (475)
T cd03813 415 ------------------------------EALG-----PAGEVVPPADPEALARAILRLLKDPELRRAMGEAG-RKRVE 458 (475)
T ss_pred ------------------------------cccC-----CceEEECCCCHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHH
Confidence 0001 35689999999999999999998765545544444 44454
Q ss_pred h-cCHHHHHHHHHH
Q psy775 979 V-HDVNYWMRSFLK 991 (1460)
Q Consensus 979 ~-~~~~~W~~~~l~ 991 (1460)
+ ++....++++.+
T Consensus 459 ~~~s~~~~~~~y~~ 472 (475)
T cd03813 459 RYYTLERMIDSYRR 472 (475)
T ss_pred HhCCHHHHHHHHHH
Confidence 4 566666666554
No 108
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.65 E-value=2.3e-15 Score=180.98 Aligned_cols=236 Identities=16% Similarity=0.194 Sum_probs=166.3
Q ss_pred cCceeecccHhHHHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhcccccc
Q psy775 626 GCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRL 705 (1460)
Q Consensus 626 ~aDlIGFqt~~yar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~ 705 (1460)
.+|.|-..+....+.+.+ .+....++.++|+|||.+.|.+.... .
T Consensus 171 ~ad~ii~~S~~~~~~~~~------------------~~~~~~~i~vi~ngvd~~~~~~~~~~---~-------------- 215 (412)
T PRK10307 171 RFDNVSTISRSMMNKARE------------------KGVAAEKVIFFPNWSEVARFQPVADA---D-------------- 215 (412)
T ss_pred hCCEEEecCHHHHHHHHH------------------cCCCcccEEEECCCcCHhhcCCCCcc---c--------------
Confidence 467777777666555432 12234568889999999887542110 0
Q ss_pred ccchhhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcC
Q psy775 706 DYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVP 785 (1460)
Q Consensus 706 ~~~~~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~p 785 (1460)
.+.+|+.++++ .++++|+++||+.+.||+..+++|++++ +++|+ +.|+.+|.+
T Consensus 216 ------~~~~~~~~~~~----------------~~~~~i~~~G~l~~~kg~~~li~a~~~l-~~~~~----~~l~ivG~g 268 (412)
T PRK10307 216 ------VDALRAQLGLP----------------DGKKIVLYSGNIGEKQGLELVIDAARRL-RDRPD----LIFVICGQG 268 (412)
T ss_pred ------hHHHHHHcCCC----------------CCCEEEEEcCccccccCHHHHHHHHHHh-ccCCC----eEEEEECCC
Confidence 12344444432 4678999999999999999999999875 55665 567766643
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCcc----ceeeeeec
Q psy775 786 SRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLV----AKEFVACQ 861 (1460)
Q Consensus 786 sr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLv----a~EymAc~ 861 (1460)
+ .++++++++++.+. .. +.|.|.++.+++..+|+.||++++||..|+++++ ..|||||
T Consensus 269 -----~----~~~~l~~~~~~~~l-------~~-v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~- 330 (412)
T PRK10307 269 -----G----GKARLEKMAQCRGL-------PN-VHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLAS- 330 (412)
T ss_pred -----h----hHHHHHHHHHHcCC-------Cc-eEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHc-
Confidence 2 23445555554332 12 5667899999999999999999999999996655 5899999
Q ss_pred cCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceE
Q psy775 862 INEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEAL 941 (1460)
Q Consensus 862 ~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~al 941 (1460)
+.|+|+|..+|..- .+ + . . ..++
T Consensus 331 ----G~PVi~s~~~g~~~----------------~~---------------~-----------------i----~-~~G~ 353 (412)
T PRK10307 331 ----GRNVVATAEPGTEL----------------GQ---------------L-----------------V----E-GIGV 353 (412)
T ss_pred ----CCCEEEEeCCCchH----------------HH---------------H-----------------H----h-CCcE
Confidence 78999999877421 00 0 0 0 2468
Q ss_pred EeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH-HhcCHHHHHHHHHHHHhhhhhc
Q psy775 942 ICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE-KVHDVNYWMRSFLKGMGTLITE 999 (1460)
Q Consensus 942 lVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~~~~ 999 (1460)
+++|.|++++|++|.++++++....+++.++ ++++ ..+++...++++++.+++...+
T Consensus 354 ~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a-~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 354 CVEPESVEALVAAIAALARQALLRPKLGTVA-REYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred EeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH-HHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999998765555555555 5555 5689999999999988876643
No 109
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.65 E-value=4e-14 Score=165.83 Aligned_cols=282 Identities=15% Similarity=0.122 Sum_probs=181.6
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC-CCCccccccCcc-HHHHHhhcccCceeecccHhHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP-FPPWDIFRLFPW-SDEILQGMLGCDMVGFHIEDYCLNFVDCC 645 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP-fP~~e~fr~lP~-r~eIL~~LL~aDlIGFqt~~yar~FL~~c 645 (1460)
|+|.+|.+.-...+..+...+.. ....+..+.+|-. +.. ....+. ..-+...+-.+|.|-..+......+.+.+
T Consensus 86 divh~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~---~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 161 (371)
T cd04962 86 DLLHVHYAVPHAVAAYLAREILG-KKDLPVVTTLHGTDITL---VGQDPSFQPATRFSIEKSDGVTAVSESLRQETYELF 161 (371)
T ss_pred cEEeecccCCccHHHHHHHHhcC-cCCCcEEEEEcCCcccc---ccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHhc
Confidence 68888876544444444422211 1245666667742 110 001111 11223345678988888887766654321
Q ss_pred HHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhH
Q psy775 646 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYER 725 (1460)
Q Consensus 646 ~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r 725 (1460)
+..-++.++|+|+|...|..... ...++.+++
T Consensus 162 ------------------~~~~~i~vi~n~~~~~~~~~~~~--------------------------~~~~~~~~~---- 193 (371)
T cd04962 162 ------------------DITKEIEVIPNFVDEDRFRPKPD--------------------------EALKRRLGA---- 193 (371)
T ss_pred ------------------CCcCCEEEecCCcCHhhcCCCch--------------------------HHHHHhcCC----
Confidence 11234778999999866542110 112222222
Q ss_pred HHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q psy775 726 FVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 805 (1460)
Q Consensus 726 ~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~ 805 (1460)
..++++++++||+.+.||+...++|+.++.++ ++ +.|+.+|.+. +. .++++++.
T Consensus 194 ------------~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~-~~----~~l~i~G~g~-----~~----~~~~~~~~ 247 (371)
T cd04962 194 ------------PEGEKVLIHISNFRPVKRIDDVIRIFAKVRKE-VP----ARLLLVGDGP-----ER----SPAERLAR 247 (371)
T ss_pred ------------CCCCeEEEEecccccccCHHHHHHHHHHHHhc-CC----ceEEEEcCCc-----CH----HHHHHHHH
Confidence 25678999999999999999999999987654 33 3566666432 22 23344444
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhh
Q psy775 806 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEAL 885 (1460)
Q Consensus 806 ~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l 885 (1460)
+.+. .+.+.+.|.. +++..+|+.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+
T Consensus 248 ~~~~-------~~~v~~~g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~-----g~PvI~s~~~~~~e~i---- 309 (371)
T cd04962 248 ELGL-------QDDVLFLGKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMAC-----GVPVVASNAGGIPEVV---- 309 (371)
T ss_pred HcCC-------CceEEEecCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHc-----CCCEEEeCCCCchhhh----
Confidence 3322 2335566654 57999999999999999999999999999999 7899999998876611
Q ss_pred hcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHH
Q psy775 886 ICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDE 965 (1460)
Q Consensus 886 ~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~e 965 (1460)
.++ ..+++++|.|++++|++|.+.++++...
T Consensus 310 -----------------------------------------~~~--------~~G~~~~~~~~~~l~~~i~~l~~~~~~~ 340 (371)
T cd04962 310 -----------------------------------------KHG--------ETGFLVDVGDVEAMAEYALSLLEDDELW 340 (371)
T ss_pred -----------------------------------------cCC--------CceEEcCCCCHHHHHHHHHHHHhCHHHH
Confidence 111 2458899999999999999999865544
Q ss_pred HHHHHHHHHhH-HHhcCHHHHHHHHHHHHhh
Q psy775 966 RTLRMNYLRKR-EKVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 966 r~~r~~~~~~~-v~~~~~~~W~~~~l~~l~~ 995 (1460)
.+.+.+. +++ ...+++...++++++-+++
T Consensus 341 ~~~~~~~-~~~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 341 QEFSRAA-RNRAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHHHH-HHHHHHhCCHHHHHHHHHHHHHh
Confidence 4444443 444 6678888888888776643
No 110
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.65 E-value=1.1e-14 Score=169.30 Aligned_cols=164 Identities=18% Similarity=0.173 Sum_probs=122.9
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++.+|+++||+++.||+...++|+..+.+++|++ .++.+|.+ +.. .++++.+.+.+ +.+
T Consensus 190 ~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~----~l~ivG~g-----~~~----~~~~~~~~~~~-------~~~ 249 (358)
T cd03812 190 EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNA----KLLLVGDG-----ELE----EEIKKKVKELG-------LED 249 (358)
T ss_pred CCCEEEEEEeccccccChHHHHHHHHHHHHhCCCe----EEEEEeCC-----chH----HHHHHHHHhcC-------CCC
Confidence 56789999999999999999999999999999874 56666643 222 23333333322 233
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|. .+++..+|+.||++|.||..||++++++||||| +.|+|+|..+|..+.+.
T Consensus 250 ~v~~~g~--~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~-----G~PvI~s~~~~~~~~i~---------------- 306 (358)
T cd03812 250 KVIFLGV--RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQAS-----GLPCILSDTITKEVDLT---------------- 306 (358)
T ss_pred cEEEecc--cCCHHHHHHhcCEEEecccccCCCHHHHHHHHh-----CCCEEEEcCCchhhhhc----------------
Confidence 4666666 678999999999999999999999999999999 78999999998766111
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
+ .+.++..+.+++++|++|.++++.+..++..+..+..++-.
T Consensus 307 ------------------------------~--------~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~ 348 (358)
T cd03812 307 ------------------------------D--------LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGLDA 348 (358)
T ss_pred ------------------------------c--------CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhccchh
Confidence 0 12345555678999999999999998877776665555444
Q ss_pred hcCHH
Q psy775 979 VHDVN 983 (1460)
Q Consensus 979 ~~~~~ 983 (1460)
..+..
T Consensus 349 ~~~~~ 353 (358)
T cd03812 349 DDEAN 353 (358)
T ss_pred hhhhh
Confidence 44333
No 111
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.64 E-value=1.3e-14 Score=168.68 Aligned_cols=182 Identities=14% Similarity=0.076 Sum_probs=128.7
Q ss_pred EEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHH
Q psy775 315 RPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQ 394 (1460)
Q Consensus 315 ~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~ 394 (1460)
.++|+|+|...+..............++.++++||+.+.||+..+++|+.++.. ++.|+.+|..... .
T Consensus 167 ~~i~ngv~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~~~l~ivG~~~~~--~--- 234 (363)
T cd04955 167 TYIPYGADHVVSSEEDEILKKYGLEPGRYYLLVGRIVPENNIDDLIEAFSKSNS-------GKKLVIVGNADHN--T--- 234 (363)
T ss_pred eeeCCCcChhhcchhhhhHHhcCCCCCcEEEEEecccccCCHHHHHHHHHhhcc-------CceEEEEcCCCCc--c---
Confidence 689999998776431110001111344578899999999999999999987632 3557777754321 1
Q ss_pred HHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCC-CCCCcceeeeeeeccCCCCCeEEEcC
Q psy775 395 DLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR-DGMNLVAKEFVACQINEPPGVLIVSP 473 (1460)
Q Consensus 395 ~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlr-EGfnLValEamAcq~~~~~GvlVlSe 473 (1460)
++.+.+.+ +.+ ..+.+.+.|.++++++..+|+.||++++||.. ||||++++||||| |.|+|+|.
T Consensus 235 ~~~~~~~~---~~~-------~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~-----G~PvI~s~ 299 (363)
T cd04955 235 PYGKLLKE---KAA-------ADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAY-----GCPVLASD 299 (363)
T ss_pred hHHHHHHH---HhC-------CCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHc-----CCCEEEec
Confidence 22333322 111 11235567999999999999999999999999 9999999999999 67789999
Q ss_pred CCCchhcccc-cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 474 FAGAGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 474 ~aGaa~~L~~-allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.+|..+.+.+ +.+++|.|. ++++|.+++++++..++.+.++.......++
T Consensus 300 ~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~~~~~~~~fs 350 (363)
T cd04955 300 NPFNREVLGDKAIYFKVGDD--LASLLEELEADPEEVSAMAKAARERIREKYT 350 (363)
T ss_pred CCccceeecCCeeEecCchH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCC
Confidence 9888777754 888888776 9999999999876655555444443333455
No 112
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.64 E-value=4.8e-15 Score=180.29 Aligned_cols=159 Identities=11% Similarity=0.076 Sum_probs=115.0
Q ss_pred eecccCchhhhhhhccchhhhc-cC--CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHH
Q psy775 317 LPIAIPYERFVQLAQAAPRVID-TK--QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEY 393 (1460)
Q Consensus 317 iPiGID~~~f~~~~~~~~~~~~-~~--~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey 393 (1460)
.+.|||++.|.+.......... .+ .+++++||||.+.||+..+|+||.++.++.|++ .|+++ |++++.
T Consensus 201 ~v~GVd~~~f~~~~~~~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~----~l~iv-----GdGp~~ 271 (462)
T PLN02846 201 NVHGVNPKFLEIGKLKLEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGL----EVDLY-----GSGEDS 271 (462)
T ss_pred cCceechhhcCCCcccHhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCe----EEEEE-----CCCccH
Confidence 3579999988654322111111 22 357899999999999999999999998888875 34444 455555
Q ss_pred HHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcC
Q psy775 394 QDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP 473 (1460)
Q Consensus 394 ~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe 473 (1460)
+++++.+. +.+. . +++|.|..+.+ .+|+.+|+||+||..||||+|.+||||| |.|+|++.
T Consensus 272 ~~L~~~a~----~l~l-------~-~~vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~-----G~PVVa~~ 331 (462)
T PLN02846 272 DEVKAAAE----KLEL-------D-VRVYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAM-----GKIVVCAN 331 (462)
T ss_pred HHHHHHHH----hcCC-------c-EEEECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHc-----CCcEEEec
Confidence 55554433 3321 1 34467766555 5799999999999999999999999999 66778888
Q ss_pred CCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCH
Q psy775 474 FAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 474 ~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~ 507 (1460)
..| .+.+. +|+++ .|.++++++|.++|+.++
T Consensus 332 ~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~ 365 (462)
T PLN02846 332 HPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEP 365 (462)
T ss_pred CCC-cceeecCCceEec--CCHHHHHHHHHHHHccCc
Confidence 765 56663 26566 489999999999998654
No 113
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.64 E-value=2.2e-14 Score=164.48 Aligned_cols=173 Identities=20% Similarity=0.289 Sum_probs=128.2
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++.+++++||+++.||+...++|+.++.+++|++ .|+.+|.... . ....++.++.+.+ ..+
T Consensus 201 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~~~~----~---~~~~~~~~~~~~~-------~~~ 262 (375)
T cd03821 201 PDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDW----HLVIAGPDEG----G---YRAELKQIAAALG-------LED 262 (375)
T ss_pred CCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCe----EEEEECCCCc----c---hHHHHHHHHHhcC-------ccc
Confidence 56788999999999999999999999999888874 5666664321 1 1223333333322 234
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|.++.+++..+|+.||+++.||..||||++++|||+| +.|+|+|..+|..+.+.
T Consensus 263 ~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~-----G~PvI~~~~~~~~~~~~---------------- 321 (375)
T cd03821 263 RVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALAC-----GTPVVTTDKVPWQELIE---------------- 321 (375)
T ss_pred eEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhc-----CCCEEEcCCCCHHHHhh----------------
Confidence 577889999999999999999999999999999999999999 78999999888666111
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhH-H
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR-E 977 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~-v 977 (1460)
. ..++++ |.+.++++++|.++++++...+....+. +++ .
T Consensus 322 -------------------------------------~-~~~~~~-~~~~~~~~~~i~~l~~~~~~~~~~~~~~-~~~~~ 361 (375)
T cd03821 322 -------------------------------------Y-GCGWVV-DDDVDALAAALRRALELPQRLKAMGENG-RALVE 361 (375)
T ss_pred -------------------------------------c-CceEEe-CCChHHHHHHHHHHHhCHHHHHHHHHHH-HHHHH
Confidence 0 123444 4466999999999999885444444444 444 6
Q ss_pred HhcCHHHHHHHHH
Q psy775 978 KVHDVNYWMRSFL 990 (1460)
Q Consensus 978 ~~~~~~~W~~~~l 990 (1460)
.+++++..+++++
T Consensus 362 ~~~s~~~~~~~~~ 374 (375)
T cd03821 362 ERFSWTAIAQQLL 374 (375)
T ss_pred HhcCHHHHHHHhh
Confidence 7778777776654
No 114
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.64 E-value=1.7e-14 Score=166.01 Aligned_cols=219 Identities=17% Similarity=0.127 Sum_probs=148.1
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 290 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~ 290 (1460)
.-|+|.+|+....++ +.+ ..+.++.+.+|..++.... .........+.+-+-+......+
T Consensus 87 ~~Divh~~~~~~~~~---~~~-----~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~---- 146 (335)
T cd03802 87 DFDIVHNHSLHLPLP---FAR-----PLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPW---- 146 (335)
T ss_pred CCCEEEecCcccchh---hhc-----ccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhc----
Confidence 479999999887766 222 2256788888876543211 12233333343333222221110
Q ss_pred HhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhC
Q psy775 291 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 370 (1460)
Q Consensus 291 ~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~ 370 (1460)
... .++.++|+|+|.+.|... ..++.+++++||+.+.||+..+++|+.+
T Consensus 147 -----------------~~~-~~~~vi~ngvd~~~~~~~--------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~----- 195 (335)
T cd03802 147 -----------------PPL-PWVATVHNGIDLDDYPFR--------GPKGDYLLFLGRISPEKGPHLAIRAARR----- 195 (335)
T ss_pred -----------------ccc-cccEEecCCcChhhCCCC--------CCCCCEEEEEEeeccccCHHHHHHHHHh-----
Confidence 011 467889999999888641 1245689999999999999999999754
Q ss_pred CCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC-CCC
Q psy775 371 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-RDG 449 (1460)
Q Consensus 371 P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl-rEG 449 (1460)
++ +.|+++|.... .+ .+...+..... ++ +-+.+.|.++++++..+|+.||++++||. .||
T Consensus 196 ~~----~~l~i~G~~~~---~~--~~~~~~~~~~~-~~---------~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~ 256 (335)
T cd03802 196 AG----IPLKLAGPVSD---PD--YFYREIAPELL-DG---------PDIEYLGEVGGAEKAELLGNARALLFPILWEEP 256 (335)
T ss_pred cC----CeEEEEeCCCC---HH--HHHHHHHHhcc-cC---------CcEEEeCCCCHHHHHHHHHhCcEEEeCCcccCC
Confidence 23 34666664321 11 12222222110 11 22556699999999999999999999998 599
Q ss_pred CCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCC
Q psy775 450 MNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMP 506 (1460)
Q Consensus 450 fnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~ 506 (1460)
||++++||||| |.|+|+|..+|..+.+.+ |+++++ +++++++|.+++..+
T Consensus 257 ~~~~~lEAma~-----G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~ 309 (335)
T cd03802 257 FGLVMIEAMAC-----GTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLD 309 (335)
T ss_pred cchHHHHHHhc-----CCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccH
Confidence 99999999999 678899999888887753 889987 999999999987653
No 115
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.63 E-value=1.9e-14 Score=173.81 Aligned_cols=176 Identities=16% Similarity=0.176 Sum_probs=135.2
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++..|+++||+.+.||+...++|+.++.+++|+. ++.++.+|.+ + ..+++++++.+.+ -.+
T Consensus 228 ~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~--~l~~~iiG~g-----~----~~~~l~~~~~~~~-------~~~ 289 (407)
T cd04946 228 DDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSI--KIKWTHIGGG-----P----LEDTLKELAESKP-------ENI 289 (407)
T ss_pred CCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCc--eEEEEEEeCc-----h----HHHHHHHHHHhcC-------CCc
Confidence 34678999999999999999999999999999876 4666656543 2 2234444444221 123
Q ss_pred EEEEcCCCCHHHHHHHHHH--ccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhh
Q psy775 819 IRYIYGCISQDELASFYRD--AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 896 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~--ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~ 896 (1460)
.+.+.|.++.+|+.++|+. ||+++.||..|||+++.+||||| +.|+|+|..+|..+++.
T Consensus 290 ~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~-----G~PVIas~vgg~~e~i~-------------- 350 (407)
T cd04946 290 SVNFTGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSF-----GIPVIATNVGGTPEIVD-------------- 350 (407)
T ss_pred eEEEecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHc-----CCCEEeCCCCCcHHHhc--------------
Confidence 4778899999999999986 78999999999999999999999 78999999998777221
Q ss_pred hhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCC-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNP-YEIDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 897 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP-~d~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
++ ..+++++| .|++++|++|.+.++.+....+.+.++...
T Consensus 351 -------------------------------~~--------~~G~l~~~~~~~~~la~~I~~ll~~~~~~~~m~~~ar~~ 391 (407)
T cd04946 351 -------------------------------NG--------GNGLLLSKDPTPNELVSSLSKFIDNEEEYQTMREKAREK 391 (407)
T ss_pred -------------------------------CC--------CcEEEeCCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 11 23466665 589999999999998766656666666555
Q ss_pred HHHhcCHHHHHHHHH
Q psy775 976 REKVHDVNYWMRSFL 990 (1460)
Q Consensus 976 ~v~~~~~~~W~~~~l 990 (1460)
...+++.+.+.++|+
T Consensus 392 ~~~~f~~~~~~~~~~ 406 (407)
T cd04946 392 WEENFNASKNYREFA 406 (407)
T ss_pred HHHHcCHHHhHHHhc
Confidence 567889888888775
No 116
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.63 E-value=8.9e-15 Score=177.05 Aligned_cols=143 Identities=9% Similarity=0.104 Sum_probs=109.0
Q ss_pred CCeEEEEecCccccCCHHHHHHHHHHHHHhCCCC--CCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcc
Q psy775 340 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH--LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 417 (1460)
Q Consensus 340 ~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~--~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~ 417 (1460)
+..+++++||+.+.||+..+++|+..+.+..++. ..++.|+.+|.+ +..++++ +++.+. +..
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G-----~~~~~l~----~~~~~~-------~l~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKG-----PLKEKYL----ERIKEL-------KLK 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecC-----ccHHHHH----HHHHHc-------CCC
Confidence 3468889999999999999999999987642110 113557777633 2223333 333332 234
Q ss_pred cEEEEcCCCCHHHHHHHHHhccEEEEc---cCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCC
Q psy775 418 PIRYIYGCISQDELASFYRDAAVALVT---PLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYE 491 (1460)
Q Consensus 418 pIv~~~g~v~~eeL~aLY~aADV~Vvp---SlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D 491 (1460)
.++++.|.++.+++..+|++||++|++ +..+||+++++||||| |.|+|+|..+|..+.+.+ |++|+ |
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~-----G~PVI~s~~~~~~eiv~~~~~G~lv~--d 367 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC-----GLPVCALDFKCIDELVKHGENGLVFG--D 367 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc-----CCCEEEeCCCCHHHHhcCCCCEEEEC--C
Confidence 578887899999999999999999974 3358899999999999 677899999888877743 88884 9
Q ss_pred HHHHHHHHHHHcCC
Q psy775 492 IDAAAEVIHRALTM 505 (1460)
Q Consensus 492 ~~elA~AI~~aL~m 505 (1460)
++++|++|.+++++
T Consensus 368 ~~~la~~i~~ll~~ 381 (415)
T cd03816 368 SEELAEQLIDLLSN 381 (415)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999998
No 117
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.63 E-value=7.8e-15 Score=171.87 Aligned_cols=149 Identities=21% Similarity=0.262 Sum_probs=117.4
Q ss_pred EEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHH
Q psy775 315 RPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQ 394 (1460)
Q Consensus 315 ~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~ 394 (1460)
.++|+|+|.+.|.... ...++++++||+.+.||++.+++|+.++ | + .|+.+|. +++.+
T Consensus 177 ~vi~~~~d~~~~~~~~--------~~~~~il~~G~~~~~K~~~~li~a~~~~----~-~----~l~ivG~-----g~~~~ 234 (351)
T cd03804 177 TVIYPPVDTDRFTPAE--------EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G-K----RLVVIGD-----GPELD 234 (351)
T ss_pred EEECCCCCHhhcCcCC--------CCCCEEEEEEcCccccChHHHHHHHHHC----C-C----cEEEEEC-----ChhHH
Confidence 5788999988875431 2345789999999999999999999775 3 2 2555552 23322
Q ss_pred HHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC
Q psy775 395 DLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474 (1460)
Q Consensus 395 ~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~ 474 (1460)
.+++ ... .. +.+.|.++++++.++|+.||++++||. ||||++++||||| |.|+|+|..
T Consensus 235 ~l~~-------~~~--------~~-V~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~-----G~Pvi~~~~ 292 (351)
T cd03804 235 RLRA-------KAG--------PN-VTFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMAS-----GTPVIAYGK 292 (351)
T ss_pred HHHh-------hcC--------CC-EEEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHc-----CCCEEEeCC
Confidence 3322 111 12 445699999999999999999999999 9999999999999 677899999
Q ss_pred CCchhcccc---cEEECCCCHHHHHHHHHHHcCCCH
Q psy775 475 AGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 475 aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~ 507 (1460)
+|..+.+.+ |++++|.|++++|++|.++++++.
T Consensus 293 ~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 293 GGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred CCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 888877743 999999999999999999999874
No 118
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.63 E-value=1e-14 Score=168.16 Aligned_cols=273 Identities=21% Similarity=0.197 Sum_probs=187.7
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC--CCCcccccc---CccHHHHHhhcccCceeecccHhHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP--FPPWDIFRL---FPWSDEILQGMLGCDMVGFHIEDYCLNFV 642 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP--fP~~e~fr~---lP~r~eIL~~LL~aDlIGFqt~~yar~FL 642 (1460)
|+||+|++..... + ....+..+.+|-. +..+..... ..........+..+|.+-+.+...++.+.
T Consensus 87 Dii~~~~~~~~~~----~------~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~ 156 (365)
T cd03809 87 DLLHSPHNTAPLL----R------LRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLL 156 (365)
T ss_pred CeeeecccccCcc----c------CCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHH
Confidence 7999999887664 1 2356677777753 222332221 12234455566778888888876666655
Q ss_pred HHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCc
Q psy775 643 DCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIP 722 (1460)
Q Consensus 643 ~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~ 722 (1460)
+.. +....++.++|+|+|...+..... +. +...
T Consensus 157 ~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~--------------------------~~-~~~~--- 189 (365)
T cd03809 157 RYL-----------------GVPPDKIVVIPLGVDPRFRPPPAE--------------------------AE-VLRA--- 189 (365)
T ss_pred HHh-----------------CcCHHHEEeeccccCccccCCCch--------------------------HH-HHHH---
Confidence 421 112345778999999865532110 00 1110
Q ss_pred hhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHH
Q psy775 723 YERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQ 802 (1460)
Q Consensus 723 ~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~ 802 (1460)
....++++|+++||+.+.||+...++|+..+.+++|+ +.|+.+|...... ......+
T Consensus 190 -------------~~~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~----~~l~i~G~~~~~~----~~~~~~~-- 246 (365)
T cd03809 190 -------------LYLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPD----PKLVIVGKRGWLN----EELLARL-- 246 (365)
T ss_pred -------------hcCCCCCeEEEeCCCccccCHHHHHHHHHHHHHhcCC----CCEEEecCCcccc----HHHHHHH--
Confidence 0125678899999999999999999999999988874 4566666543221 1111111
Q ss_pred HHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhh
Q psy775 803 LVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH 882 (1460)
Q Consensus 803 lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~ 882 (1460)
.+. +....+.+.|.++.+++..+|+.||+++.||..||++++++|||+| +.|+|+|+.+|..+.
T Consensus 247 --~~~-------~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~-----G~pvI~~~~~~~~e~-- 310 (365)
T cd03809 247 --REL-------GLGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMAC-----GTPVIASNISSLPEV-- 310 (365)
T ss_pred --HHc-------CCCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcC-----CCcEEecCCCCccce--
Confidence 111 2234578889999999999999999999999999999999999999 778999988776551
Q ss_pred hhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCC
Q psy775 883 EALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMP 962 (1460)
Q Consensus 883 ~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~ 962 (1460)
.+ ++++.++|.|+++++++|.++++.+
T Consensus 311 ------------------------------------------------~~-----~~~~~~~~~~~~~~~~~i~~l~~~~ 337 (365)
T cd03809 311 ------------------------------------------------AG-----DAALYFDPLDPEALAAAIERLLEDP 337 (365)
T ss_pred ------------------------------------------------ec-----CceeeeCCCCHHHHHHHHHHHhcCH
Confidence 11 3568899999999999999998765
Q ss_pred HHHHHHHHHHHHhHHHhcCHHHHHHHHH
Q psy775 963 EDERTLRMNYLRKREKVHDVNYWMRSFL 990 (1460)
Q Consensus 963 ~~er~~r~~~~~~~v~~~~~~~W~~~~l 990 (1460)
....+...+ .+++...++++.++++++
T Consensus 338 ~~~~~~~~~-~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 338 ALREELRER-GLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHHHHHH-HHHHHHhCCHHHHHHHHh
Confidence 554444444 457888999999988775
No 119
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.62 E-value=2.9e-14 Score=165.57 Aligned_cols=269 Identities=18% Similarity=0.152 Sum_probs=175.6
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQR 647 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~r 647 (1460)
|+|.+|..+......... ...+.++.+.+|-.++... ..+.+ +..+|.+-+.+....+.+. .
T Consensus 80 dii~~~~~~~~~~~~~~~-----~~~~~~~i~~~h~~~~~~~------~~~~~---~~~~~~vi~~s~~~~~~~~----~ 141 (355)
T cd03819 80 DIVHARSRAPAWSAYLAA-----RRTRPPFVTTVHGFYSVNF------RYNAI---MARGDRVIAVSNFIADHIR----E 141 (355)
T ss_pred CEEEECCCchhHHHHHHH-----HhcCCCEEEEeCCchhhHH------HHHHH---HHhcCEEEEeCHHHHHHHH----H
Confidence 689998866543333222 1234677777885443221 22233 3457777665554443332 1
Q ss_pred HhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHHH
Q psy775 648 RLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFV 727 (1460)
Q Consensus 648 lLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~ 727 (1460)
. ++....++.++|+|+|.+.|...... . .....+|+.++.
T Consensus 142 ~-------------~~~~~~k~~~i~ngi~~~~~~~~~~~-~--------------------~~~~~~~~~~~~------ 181 (355)
T cd03819 142 N-------------YGVDPDRIRVIPRGVDLDRFDPGAVP-P--------------------ERILALAREWPL------ 181 (355)
T ss_pred h-------------cCCChhhEEEecCCccccccCccccc-h--------------------HHHHHHHHHcCC------
Confidence 1 12223467889999998877432110 0 001123333321
Q ss_pred HHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHH
Q psy775 728 QLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI 807 (1460)
Q Consensus 728 ~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~I 807 (1460)
..++++++++||+.+.||+...++|+..+.+++|+ +.++.+|.+... ..+.+++.+.+.+.
T Consensus 182 ----------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~----~~l~ivG~~~~~-----~~~~~~~~~~~~~~ 242 (355)
T cd03819 182 ----------PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPD----VHLLIVGDAQGR-----RFYYAELLELIKRL 242 (355)
T ss_pred ----------CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCC----eEEEEEECCccc-----chHHHHHHHHHHHc
Confidence 25678999999999999999999999998887665 467777755322 13444454444443
Q ss_pred hccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECC-CccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhh
Q psy775 808 NGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP-LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALI 886 (1460)
Q Consensus 808 N~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtS-lrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~ 886 (1460)
+. .+-+.+.|. .+++..+|+.||++++|| ..||++++.+||||| +.|+|+|..+|..+.+.
T Consensus 243 ~~-------~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~-----G~PvI~~~~~~~~e~i~---- 304 (355)
T cd03819 243 GL-------QDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAM-----GRPVIASDHGGARETVR---- 304 (355)
T ss_pred CC-------cceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhc-----CCCEEEcCCCCcHHHHh----
Confidence 22 233566667 678999999999999999 789999999999999 78999999887665111
Q ss_pred cCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHH
Q psy775 887 CNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDER 966 (1460)
Q Consensus 887 vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er 966 (1460)
....+++++|.|+++++++|..++..+++++
T Consensus 305 -------------------------------------------------~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~ 335 (355)
T cd03819 305 -------------------------------------------------PGETGLLVPPGDAEALAQALDQILSLLPEGR 335 (355)
T ss_pred -------------------------------------------------CCCceEEeCCCCHHHHHHHHHHHHhhCHHHH
Confidence 0124688999999999999988888777776
Q ss_pred HHHHHHHHhHHHhc
Q psy775 967 TLRMNYLRKREKVH 980 (1460)
Q Consensus 967 ~~r~~~~~~~v~~~ 980 (1460)
....+..++++.++
T Consensus 336 ~~~~~~a~~~~~~~ 349 (355)
T cd03819 336 AKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHHHHHHHHh
Confidence 66555556666543
No 120
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.62 E-value=9e-14 Score=160.49 Aligned_cols=180 Identities=21% Similarity=0.254 Sum_probs=134.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++++++||+.+.||+...++|++++.+++|++ .|+.+|...... . ....+..+++.+.+ ..+
T Consensus 183 ~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~----~l~i~G~~~~~~-~---~~~~~~~~~i~~~~-------~~~ 247 (366)
T cd03822 183 DGRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDV----RLLVAGETHPDL-E---RYRGEAYALAERLG-------LAD 247 (366)
T ss_pred CCCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCe----EEEEeccCccch-h---hhhhhhHhHHHhcC-------CCC
Confidence 46788999999999999999999999998888864 677666443211 1 11111012233322 223
Q ss_pred EEEEcCC-CCHHHHHHHHHHccEEEECCCcc--CCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhh
Q psy775 819 IRYIYGC-ISQDELASFYRDAAVALVTPLRD--GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAA 895 (1460)
Q Consensus 819 vv~~~g~-v~~eel~Aly~~ADv~vvtSlrE--GmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~ 895 (1460)
.+.+.+. ++.+++..+|+.||+++.||..| |++++++|||+| +.|+|+|..+| .+.
T Consensus 248 ~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~-----G~PvI~~~~~~-~~~--------------- 306 (366)
T cd03822 248 RVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGF-----GKPVISTPVGH-AEE--------------- 306 (366)
T ss_pred cEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHc-----CCCEEecCCCC-hhe---------------
Confidence 3555555 99999999999999999999999 999999999999 77999999887 441
Q ss_pred hhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 896 AEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 896 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
+.++ ..+++++|.|++++|++|..+++.+....+.+ +..++
T Consensus 307 ------------------------------i~~~--------~~g~~~~~~d~~~~~~~l~~l~~~~~~~~~~~-~~~~~ 347 (366)
T cd03822 307 ------------------------------VLDG--------GTGLLVPPGDPAALAEAIRRLLADPELAQALR-ARARE 347 (366)
T ss_pred ------------------------------eeeC--------CCcEEEcCCCHHHHHHHHHHHHcChHHHHHHH-HHHHH
Confidence 1111 24588999999999999999999766555544 44577
Q ss_pred HHHhcCHHHHHHHHHHHH
Q psy775 976 REKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 976 ~v~~~~~~~W~~~~l~~l 993 (1460)
++.+++++.+++++.+-+
T Consensus 348 ~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 348 YARAMSWERVAERYLRLL 365 (366)
T ss_pred HHhhCCHHHHHHHHHHHh
Confidence 888899999998887654
No 121
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.61 E-value=9.8e-15 Score=180.13 Aligned_cols=239 Identities=8% Similarity=0.036 Sum_probs=148.7
Q ss_pred CCCEEEEeCcchhHHH---HHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHH
Q psy775 211 GTPLVWIHDYHLMLAA---NTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP---~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL 287 (1460)
..|+|-+|..-.+... ....++ .+ ++....||.||.+--+..+..-+.++ -.++.+|+
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArK-----l~-PVVasyHTny~eYl~~y~~g~L~~~l-------------lk~l~~~v 494 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDK-----FN-HVVGVVHTNYLEYIKREKNGALQAFF-------------VKHINNWV 494 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHH-----cC-CeEEEEeCCcHHHHhHhcchhHHHHH-------------HHHHHHHH
Confidence 4699999875433333 222222 13 68889999998533222211111111 12334444
Q ss_pred HH--HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc----cCCeEEEEecCccccCCHHHHHH
Q psy775 288 DC--CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID----TKQKIVLGVDRLDYTKGLVHRLK 361 (1460)
Q Consensus 288 ~~--~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~----~~~kvIL~VgRLd~~KGI~~lL~ 361 (1460)
.. |++++..+..... ...+ .+ ....|||++.|.+....... .+ ...+.+++|||+.+.||+..+|+
T Consensus 495 ~r~hcD~VIaPS~atq~----L~~~--vI-~nVnGVDte~F~P~~r~~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LLe 566 (794)
T PLN02501 495 TRAYCHKVLRLSAATQD----LPKS--VI-CNVHGVNPKFLKIGEKVAEE-RELGQQAFSKGAYFLGKMVWAKGYRELID 566 (794)
T ss_pred HHhhCCEEEcCCHHHHH----hccc--ce-eecccccccccCCcchhHHH-HhcCCccccCceEEEEcccccCCHHHHHH
Confidence 44 6777643311111 1111 11 11259999998765332111 11 12345899999999999999999
Q ss_pred HHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEE
Q psy775 362 AFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVA 441 (1460)
Q Consensus 362 Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~ 441 (1460)
|+..+.++.|++ .|+++| +++..+++++. +.+.+. .+. |.|..++. ..+|+.||||
T Consensus 567 Ala~L~~~~pnv----rLvIVG-----DGP~reeLe~l----a~eLgL--------~V~-FLG~~dd~--~~lyasaDVF 622 (794)
T PLN02501 567 LLAKHKNELDGF----NLDVFG-----NGEDAHEVQRA----AKRLDL--------NLN-FLKGRDHA--DDSLHGYKVF 622 (794)
T ss_pred HHHHHHhhCCCe----EEEEEc-----CCccHHHHHHH----HHHcCC--------EEE-ecCCCCCH--HHHHHhCCEE
Confidence 999998888875 455555 34444444443 333322 133 44654433 3789999999
Q ss_pred EEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHHHHHHHHHcCCCHH
Q psy775 442 LVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 442 VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
|+||.+||||+|++||||| |.|||+|...|. ..+. ++++ +.|.++++++|.++|++++.
T Consensus 623 VlPS~sEgFGlVlLEAMA~-----GlPVVATd~pG~-e~V~~g~nGll--~~D~EafAeAI~~LLsd~~~ 684 (794)
T PLN02501 623 INPSISDVLCTATAEALAM-----GKFVVCADHPSN-EFFRSFPNCLT--YKTSEDFVAKVKEALANEPQ 684 (794)
T ss_pred EECCCcccchHHHHHHHHc-----CCCEEEecCCCC-ceEeecCCeEe--cCCHHHHHHHHHHHHhCchh
Confidence 9999999999999999999 677799988764 3342 2443 37899999999999998763
No 122
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.61 E-value=3.7e-14 Score=164.73 Aligned_cols=181 Identities=19% Similarity=0.271 Sum_probs=129.0
Q ss_pred EEEEEeecccCchhhhhhhccchh-hhc--cCCeEEEEecCccc--cCCHHHHHHHHHHHHHh-CCCCCCcEEEEEEEcC
Q psy775 312 VRIRPLPIAIPYERFVQLAQAAPR-VID--TKQKIVLGVDRLDY--TKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAVP 385 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~~~~-~~~--~~~kvIL~VgRLd~--~KGI~~lL~Af~~lL~~-~P~~~~kvvLvqig~p 385 (1460)
.++.++|+|+|.+.|.+......+ ... .++++++.+++... .||+..+++|++.+.++ .|+ +.++.+|..
T Consensus 159 ~~~~vi~ngi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~~~~i~G~~ 234 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRDKREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----IELVVFGAS 234 (365)
T ss_pred CceEEeCCCCcccccCCCcHHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----eEEEEeCCC
Confidence 478899999999887543221111 111 44566666666654 99999999999988665 343 556666633
Q ss_pred CCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCC-HHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCC
Q psy775 386 SRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCIS-QDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINE 464 (1460)
Q Consensus 386 sr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~-~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~ 464 (1460)
... . + . .. ...+.+.|.++ .+++..+|+.||++++||..||||++++|||+|
T Consensus 235 ~~~---~------~--~---~~---------~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~---- 287 (365)
T cd03825 235 DPE---I------P--P---DL---------PFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALAC---- 287 (365)
T ss_pred chh---h------h--c---cC---------CCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhc----
Confidence 210 0 0 0 11 11245568888 889999999999999999999999999999999
Q ss_pred CCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH-hhcC
Q psy775 465 PPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE-KHMN 525 (1460)
Q Consensus 465 ~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v-~~~~ 525 (1460)
+.|+|+|..+|..+.+.+ |+++++.|+++++++|.++++.++..++.+.++ ++.+ .+++
T Consensus 288 -g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~-~~~~~~~~s 350 (365)
T cd03825 288 -GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPDEREELGEAA-RELAENEFD 350 (365)
T ss_pred -CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH-HHHHHHhcC
Confidence 677899998888887743 899999999999999999998765444444443 3444 3444
No 123
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.60 E-value=8.3e-14 Score=157.89 Aligned_cols=283 Identities=22% Similarity=0.204 Sum_probs=195.1
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccc----cCccHHHHHhhcccCceeecccHhHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFR----LFPWSDEILQGMLGCDMVGFHIEDYCLNFVD 643 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr----~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~ 643 (1460)
|+|++|+++........ ......++.+.+|-+++...... ...........+..+|.+-+.+....+.+.+
T Consensus 87 Dii~~~~~~~~~~~~~~-----~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 161 (374)
T cd03801 87 DVVHAHDWLALLAAALA-----ARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELRE 161 (374)
T ss_pred cEEEEechhHHHHHHHH-----HHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHh
Confidence 79999999887655412 23456788888888754432211 1111222333445567777777655555443
Q ss_pred HHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCch
Q psy775 644 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPY 723 (1460)
Q Consensus 644 ~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~ 723 (1460)
. +.....++.++|+|+|...+.... . ..+...
T Consensus 162 ~-----------------~~~~~~~~~~i~~~~~~~~~~~~~------~---------------------~~~~~~---- 193 (374)
T cd03801 162 L-----------------GGVPPEKITVIPNGVDTERFRPAP------R---------------------AARRRL---- 193 (374)
T ss_pred c-----------------CCCCCCcEEEecCcccccccCccc------h---------------------HHHhhc----
Confidence 1 111124688899999986653211 0 001110
Q ss_pred hHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHH
Q psy775 724 ERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQL 803 (1460)
Q Consensus 724 ~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~l 803 (1460)
....+++.++++||+.+.||+...++|+..+.+++|+ +.|+.+|.+ + ....+.++
T Consensus 194 ------------~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~l~i~G~~-----~----~~~~~~~~ 248 (374)
T cd03801 194 ------------GIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPD----VRLVIVGDG-----P----LREELEAL 248 (374)
T ss_pred ------------CCcCCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCC----eEEEEEeCc-----H----HHHHHHHH
Confidence 0124567899999999999999999999999888875 567766622 2 22334444
Q ss_pred HHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhh
Q psy775 804 VGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE 883 (1460)
Q Consensus 804 v~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~ 883 (1460)
+.+.+. .+.+.+.|.++.+|+..+|+.||+++.|+..||++++++|||+| +.|+|+|..+|..+.+.
T Consensus 249 ~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~-----g~pvI~~~~~~~~~~~~- 315 (374)
T cd03801 249 AAELGL-------GDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAA-----GLPVVASDVGGIPEVVE- 315 (374)
T ss_pred HHHhCC-------CcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHc-----CCcEEEeCCCChhHHhc-
Confidence 433332 23367789999999999999999999999999999999999999 78999999887666111
Q ss_pred hhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCH
Q psy775 884 ALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPE 963 (1460)
Q Consensus 884 ~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~ 963 (1460)
.-..++++++.|+++++++|.++++.+.
T Consensus 316 ----------------------------------------------------~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 343 (374)
T cd03801 316 ----------------------------------------------------DGETGLLVPPGDPEALAEAILRLLDDPE 343 (374)
T ss_pred ----------------------------------------------------CCcceEEeCCCCHHHHHHHHHHHHcChH
Confidence 0135689999999999999999999877
Q ss_pred HHHHHHHHHHHhHHHhcCHHHHHHHHHHHH
Q psy775 964 DERTLRMNYLRKREKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 964 ~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 993 (1460)
..++...+........++++.+++++++.+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 344 LRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 666666666556778899999998887654
No 124
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.60 E-value=9.3e-14 Score=158.42 Aligned_cols=282 Identities=21% Similarity=0.222 Sum_probs=187.8
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQR 647 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~r 647 (1460)
|+|++|............ ......++.+..|-+.+....... ......-..+-.+|.+-+.+......|.+..
T Consensus 95 dii~~~~~~~~~~~~~~~----~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~-- 167 (377)
T cd03798 95 DLIHAHFAYPDGFAAALL----KRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG-- 167 (377)
T ss_pred CEEEEeccchHHHHHHHH----HHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc--
Confidence 688888433222111111 112335677777765433222111 2233334455678999888887766665421
Q ss_pred HhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHHH
Q psy775 648 RLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFV 727 (1460)
Q Consensus 648 lLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~~ 727 (1460)
....++.++|+|+|...+...... .. +...
T Consensus 168 ----------------~~~~~~~~i~~~~~~~~~~~~~~~-------------------------~~--~~~~------- 197 (377)
T cd03798 168 ----------------IDPEKVTVIPNGVDTERFSPADRA-------------------------EA--RKLG------- 197 (377)
T ss_pred ----------------CCCCceEEcCCCcCcccCCCcchH-------------------------HH--Hhcc-------
Confidence 123457789999998766431110 00 0000
Q ss_pred HHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHH
Q psy775 728 QLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI 807 (1460)
Q Consensus 728 ~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~I 807 (1460)
...++..++++||+.+.||+...++|++.+.+++|+ +.|+.+|.+. .. ..+.+.+++.
T Consensus 198 ---------~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~----~~l~i~g~~~-----~~----~~~~~~~~~~ 255 (377)
T cd03798 198 ---------LPEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPD----VHLVIVGDGP-----LR----EALEALAAEL 255 (377)
T ss_pred ---------CCCCceEEEEeccCccccCHHHHHHHHHHHHhcCCC----eEEEEEcCCc-----ch----HHHHHHHHhc
Confidence 124678899999999999999999999999888775 4566555332 12 2233333322
Q ss_pred hccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhc
Q psy775 808 NGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALIC 887 (1460)
Q Consensus 808 N~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~v 887 (1460)
+..+.+.+.|.++++++..+|+.||+++.||..||++++++|||+| +.|+|+|+.+|..+.+.
T Consensus 256 -------~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~-----G~pvI~~~~~~~~~~~~----- 318 (377)
T cd03798 256 -------GLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMAC-----GLPVVATDVGGIPEIIT----- 318 (377)
T ss_pred -------CCcceEEEeCCCCHHHHHHHHHhcCeeecchhhccCChHHHHHHhc-----CCCEEEecCCChHHHhc-----
Confidence 2334577889999999999999999999999999999999999999 78999999887665111
Q ss_pred CcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHH
Q psy775 888 NPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERT 967 (1460)
Q Consensus 888 nP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~ 967 (1460)
....+++++|.|+++++++|.++++++.. +
T Consensus 319 ------------------------------------------------~~~~g~~~~~~~~~~l~~~i~~~~~~~~~--~ 348 (377)
T cd03798 319 ------------------------------------------------DGENGLLVPPGDPEALAEAILRLLADPWL--R 348 (377)
T ss_pred ------------------------------------------------CCcceeEECCCCHHHHHHHHHHHhcCcHH--H
Confidence 11235899999999999999999998765 3
Q ss_pred HHHHHHHhHHHhcCHHHHHHHHHHHHhh
Q psy775 968 LRMNYLRKREKVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 968 ~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 995 (1460)
...+........+++..+++++.+.+.+
T Consensus 349 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 349 LGRAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred HhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 4444456666777888888888776653
No 125
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.60 E-value=1.1e-13 Score=171.15 Aligned_cols=170 Identities=16% Similarity=0.135 Sum_probs=123.4
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
+..|++|||+.+.||+..+++|+.++.+++|++ .|+.+|.+ + .++++++++.+.+.. ..+
T Consensus 319 ~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~----~l~i~G~G-----~----~~~~l~~~i~~~~l~-------~~V 378 (500)
T TIGR02918 319 PFSIITASRLAKEKHIDWLVKAVVKAKKSVPEL----TFDIYGEG-----G----EKQKLQKIINENQAQ-------DYI 378 (500)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHHhhCCCe----EEEEEECc-----h----hHHHHHHHHHHcCCC-------CeE
Confidence 457999999999999999999999999999974 56666643 2 234566666554322 336
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC-CcchhhhhhhhcCcccchhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA-GAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a-G~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
.+.|.. ++..+|+.||++|.||.+||||++.+||||| |.|+|+|... |..+
T Consensus 379 ~f~G~~---~~~~~~~~adv~v~pS~~Egfgl~~lEAma~-----G~PVI~~dv~~G~~e-------------------- 430 (500)
T TIGR02918 379 HLKGHR---NLSEVYKDYELYLSASTSEGFGLTLMEAVGS-----GLGMIGFDVNYGNPT-------------------- 430 (500)
T ss_pred EEcCCC---CHHHHHHhCCEEEEcCccccccHHHHHHHHh-----CCCEEEecCCCCCHH--------------------
Confidence 677765 5778899999999999999999999999999 7899999986 5555
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCC----CC----HHHHHHHHHHHhCCCHHHHHHHHH
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNP----YE----IDAAAEVIHRALTMPEDERTLRMN 971 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP----~d----~~~iA~ai~~aL~m~~~er~~r~~ 971 (1460)
+|.++ .++++|+| .| ++++|++|.++++ ++ .+....+
T Consensus 431 -------------------------iI~~g--------~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~-~~~~~~~ 475 (500)
T TIGR02918 431 -------------------------FIEDN--------KNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SN-DIDAFHE 475 (500)
T ss_pred -------------------------HccCC--------CCEEEEeCCccccchhHHHHHHHHHHHHHhC-hH-HHHHHHH
Confidence 11222 34577763 34 8999999999994 33 3333333
Q ss_pred HHHhHHHhcCHHHHHHHHHHHH
Q psy775 972 YLRKREKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 972 ~~~~~v~~~~~~~W~~~~l~~l 993 (1460)
..++....++...-++++.+-+
T Consensus 476 ~a~~~a~~fs~~~v~~~w~~ll 497 (500)
T TIGR02918 476 YSYQIAEGFLTANIIEKWKKLV 497 (500)
T ss_pred HHHHHHHhcCHHHHHHHHHHHH
Confidence 4466677777766666655444
No 126
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.59 E-value=1.6e-13 Score=158.89 Aligned_cols=264 Identities=20% Similarity=0.198 Sum_probs=179.0
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC--CCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP--FPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC 645 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP--fP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c 645 (1460)
|+|++|..+.......+... ....+..+.+|-+ ++.+.. ..+-+.+-.+|.+-..+....+.+.+.
T Consensus 81 Dii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~vi~~s~~~~~~l~~~- 148 (355)
T cd03799 81 DHIHAHFGTTPATVAMLASR----LGGIPYSFTAHGKDIFRSPDA-------IDLDEKLARADFVVAISEYNRQQLIRL- 148 (355)
T ss_pred CEEEECCCCchHHHHHHHHH----hcCCCEEEEEecccccccCch-------HHHHHHHhhCCEEEECCHHHHHHHHHh-
Confidence 78998876543333333321 2245666667753 222211 233344567898888888766655431
Q ss_pred HHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhH
Q psy775 646 QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYER 725 (1460)
Q Consensus 646 ~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r 725 (1460)
++....++.++|+|+|.+.|.... .
T Consensus 149 ----------------~~~~~~~~~vi~~~~d~~~~~~~~------~--------------------------------- 173 (355)
T cd03799 149 ----------------LGCDPDKIHVVHCGVDLERFPPRP------P--------------------------------- 173 (355)
T ss_pred ----------------cCCCcccEEEEeCCcCHHHcCCcc------c---------------------------------
Confidence 122345688899999987664211 0
Q ss_pred HHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q psy775 726 FVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 805 (1460)
Q Consensus 726 ~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~ 805 (1460)
....++..|+++||+.+.||+...++|++++.+++|+ +.|+.+|... ...++.+.+.
T Consensus 174 ----------~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~----~~l~i~G~~~---------~~~~~~~~~~ 230 (355)
T cd03799 174 ----------PPPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGID----FRLDIVGDGP---------LRDELEALIA 230 (355)
T ss_pred ----------cccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCC----eEEEEEECCc---------cHHHHHHHHH
Confidence 0013467789999999999999999999998877665 4666666432 1233444444
Q ss_pred HHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCc------cCCCccceeeeeeccCCCCceEEEcCCCCcch
Q psy775 806 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR------DGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879 (1460)
Q Consensus 806 ~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlr------EGmnLva~EymAc~~~~~~g~lIlSe~aG~~~ 879 (1460)
+.+ ..+.+.+.|.++.+|+..+|+.||+++.||.. |||+++.+|||+| +.|+|+|..+|..+
T Consensus 231 ~~~-------~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~-----G~Pvi~~~~~~~~~ 298 (355)
T cd03799 231 ELG-------LEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAM-----GLPVISTDVSGIPE 298 (355)
T ss_pred HcC-------CCCeEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHc-----CCCEEecCCCCcch
Confidence 432 23458889999999999999999999999999 9999999999999 78899999877655
Q ss_pred hhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHh
Q psy775 880 QMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRAL 959 (1460)
Q Consensus 880 ~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL 959 (1460)
.+. ....+++++|.|+++++++|.+++
T Consensus 299 ~i~-----------------------------------------------------~~~~g~~~~~~~~~~l~~~i~~~~ 325 (355)
T cd03799 299 LVE-----------------------------------------------------DGETGLLVPPGDPEALADAIERLL 325 (355)
T ss_pred hhh-----------------------------------------------------CCCceEEeCCCCHHHHHHHHHHHH
Confidence 111 112468999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhHH-HhcCHHHHHH
Q psy775 960 TMPEDERTLRMNYLRKRE-KVHDVNYWMR 987 (1460)
Q Consensus 960 ~m~~~er~~r~~~~~~~v-~~~~~~~W~~ 987 (1460)
+++...++.+.+. ++++ ..+++...++
T Consensus 326 ~~~~~~~~~~~~a-~~~~~~~~s~~~~~~ 353 (355)
T cd03799 326 DDPELRREMGEAG-RARVEEEFDIRKQAA 353 (355)
T ss_pred hCHHHHHHHHHHH-HHHHHHhcCHHHHhh
Confidence 9876644444444 4444 5566665544
No 127
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.59 E-value=5e-14 Score=172.61 Aligned_cols=203 Identities=12% Similarity=0.140 Sum_probs=128.9
Q ss_pred CCCEEEEE-EcCccc-cCCHHHHHHHHHHHHHhCCC-CCCCEEEEEEEcCCCCCh---------hHHHHHHHHHHHHHHH
Q psy775 739 TKQKIVLG-VDRLDY-TKGLVHRLKAFETLLEKHPE-HLEKVTLLQIAVPSRTDV---------KEYQDLKEEMDQLVGR 806 (1460)
Q Consensus 739 ~~kkiIl~-VdRLd~-~KGi~~kL~Afe~fL~~~P~-~~~kVvLvqi~~psr~~~---------~~y~~l~~el~~lv~~ 806 (1460)
.+++++++ +||+++ .||++..|+|+.++=..--. -.++-|+.-+..|..+.. .-.+++++.+..+.++
T Consensus 295 ~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~ 374 (590)
T cd03793 295 LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEK 374 (590)
T ss_pred CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHH
Confidence 57788888 899999 99999999999987541111 111223344455654331 2334566666666666
Q ss_pred Hhcc---------C-----------------------------------------------------CC-CCCccEEEEc
Q psy775 807 INGR---------F-----------------------------------------------------TT-PNWSPIRYIY 823 (1460)
Q Consensus 807 IN~~---------~-----------------------------------------------------~~-~~~~pvv~~~ 823 (1460)
|+.+ . .. .+--.|+|..
T Consensus 375 i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P 454 (590)
T cd03793 375 IGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHP 454 (590)
T ss_pred hhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcc
Confidence 6655 1 00 0011233333
Q ss_pred CCCC------HHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 824 GCIS------QDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 824 g~v~------~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
..++ ..++..+|+.||++|+||.+||||++++||||| +.|+|.|..+|...-+.
T Consensus 455 ~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~-----G~PvI~t~~~gf~~~v~--------------- 514 (590)
T cd03793 455 EFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVM-----GIPSITTNLSGFGCFME--------------- 514 (590)
T ss_pred cccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHc-----CCCEEEccCcchhhhhH---------------
Confidence 3333 235788999999999999999999999999999 78999999999865111
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeC-------CCCHHHHHHHHHHHhCCCHHHHHHHH
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICN-------PYEIDAAAEVIHRALTMPEDERTLRM 970 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVn-------P~d~~~iA~ai~~aL~m~~~er~~r~ 970 (1460)
|..|. ..+.++.|. |.+++++|++|.+.+.++..++....
T Consensus 515 -------------------------------E~v~~--~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r 561 (590)
T cd03793 515 -------------------------------EHIED--PESYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQR 561 (590)
T ss_pred -------------------------------HHhcc--CCCceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHH
Confidence 11110 002345555 56788999999998877655544444
Q ss_pred HHHHhHHHhcCHHHHHHHHHHHHh
Q psy775 971 NYLRKREKVHDVNYWMRSFLKGMG 994 (1460)
Q Consensus 971 ~~~~~~v~~~~~~~W~~~~l~~l~ 994 (1460)
....+.....++.+-+...++...
T Consensus 562 ~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 562 NRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHH
Confidence 333455556666666665555543
No 128
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.59 E-value=2.8e-13 Score=154.85 Aligned_cols=172 Identities=19% Similarity=0.241 Sum_probs=127.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHH-HHhccCCCCCCc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG-RINGRFTTPNWS 817 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~-~IN~~~~~~~~~ 817 (1460)
.++++++++||+.+.||+...++|+.++.+++|++ .|+.+|.+... .+...... +.+ ..
T Consensus 191 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~~~~~---------~~~~~~~~~~~~-------~~ 250 (365)
T cd03807 191 EDTFLIGIVARLHPQKDHATLLRAAALLLKKFPNA----RLLLVGDGPDR---------ANLELLALKELG-------LE 250 (365)
T ss_pred CCCeEEEEecccchhcCHHHHHHHHHHHHHhCCCe----EEEEecCCcch---------hHHHHHHHHhcC-------CC
Confidence 56788999999999999999999999998888764 56666644311 11222222 221 22
Q ss_pred cEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 818 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 818 pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
+.+.+.|. .+|+..+|+.||+++.||..||++++++|||+| +.|+|+|..+|..+.+.
T Consensus 251 ~~v~~~g~--~~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~-----g~PvI~~~~~~~~e~~~--------------- 308 (365)
T cd03807 251 DKVILLGE--RSDVPALLNALDVFVLSSLSEGFPNVLLEAMAC-----GLPVVATDVGDNAELVG--------------- 308 (365)
T ss_pred ceEEEccc--cccHHHHHHhCCEEEeCCccccCCcHHHHHHhc-----CCCEEEcCCCChHHHhh---------------
Confidence 34555564 467999999999999999999999999999999 78999999888666111
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 977 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v 977 (1460)
+.++++++.|+++++++|.+++++++..++...+ .++++
T Consensus 309 ----------------------------------------~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~-~~~~~ 347 (365)
T cd03807 309 ----------------------------------------DTGFLVPPGDPEALAEAIEALLADPALRQALGEA-ARERI 347 (365)
T ss_pred ----------------------------------------cCCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHH-HHHHH
Confidence 1357899999999999999999987554444444 44554
Q ss_pred -HhcCHHHHHHHHHHHH
Q psy775 978 -KVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 978 -~~~~~~~W~~~~l~~l 993 (1460)
..+++...++.+.+-+
T Consensus 348 ~~~~s~~~~~~~~~~~y 364 (365)
T cd03807 348 EENFSIEAMVEAYEELY 364 (365)
T ss_pred HHhCCHHHHHHHHHHHh
Confidence 4578888888776643
No 129
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.58 E-value=1e-13 Score=163.50 Aligned_cols=265 Identities=17% Similarity=0.164 Sum_probs=173.8
Q ss_pred CceeeccccccccHHHHHHHHhhcCcCceEEEEeeCC-CCCccc--cccC-ccHHHHHhhcccCceeecccHhHHHHHHH
Q psy775 568 PLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIP-FPPWDI--FRLF-PWSDEILQGMLGCDMVGFHIEDYCLNFVD 643 (1460)
Q Consensus 568 diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHiP-fP~~e~--fr~l-P~r~eIL~~LL~aDlIGFqt~~yar~FL~ 643 (1460)
|++.+|-.+.... .+. ......+..+++|.. +..... .... ...+.++..+-.+|.|-+.+..-.+.+.+
T Consensus 101 diii~~~~~~~~~--~~~----~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~ 174 (372)
T cd04949 101 DVFILDRPTLDGQ--ALL----NMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQK 174 (372)
T ss_pred CEEEECCccccch--hHH----hccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHH
Confidence 6666655554432 122 233455677888864 221111 1111 12456667778889998888766666543
Q ss_pred HHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCch
Q psy775 644 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPY 723 (1460)
Q Consensus 644 ~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~ 723 (1460)
.. + ...++.++|+|++...+.... . .
T Consensus 175 ~~----~--------------~~~~v~~ip~g~~~~~~~~~~---~--~------------------------------- 200 (372)
T cd04949 175 QF----G--------------NYNPIYTIPVGSIDPLKLPAQ---F--K------------------------------- 200 (372)
T ss_pred Hh----C--------------CCCceEEEcccccChhhcccc---h--h-------------------------------
Confidence 21 1 011267899999976553210 0 0
Q ss_pred hHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHH
Q psy775 724 ERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQL 803 (1460)
Q Consensus 724 ~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~l 803 (1460)
...+..++++||+.+.||+...++|+.++.+++|++ .|+.+|.+.. . .++..+
T Consensus 201 --------------~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~g~~-----~----~~~~~~ 253 (372)
T cd04949 201 --------------QRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDA----TLDIYGYGDE-----E----EKLKEL 253 (372)
T ss_pred --------------hcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCc----EEEEEEeCch-----H----HHHHHH
Confidence 023457899999999999999999999999999975 5666665431 1 223333
Q ss_pred HHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC-Ccchhhh
Q psy775 804 VGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA-GAGEQMH 882 (1460)
Q Consensus 804 v~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a-G~~~~L~ 882 (1460)
+.+.+. ...+.+.|. .+++..+|+.||+++.||..|||+++.+|||+| +.|+|+|..+ |..+.
T Consensus 254 ~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~-----G~PvI~~~~~~g~~~~-- 317 (372)
T cd04949 254 IEELGL-------EDYVFLKGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH-----GLPVISYDVNYGPSEI-- 317 (372)
T ss_pred HHHcCC-------cceEEEcCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhC-----CCCEEEecCCCCcHHH--
Confidence 333222 234666773 567999999999999999999999999999999 7799999876 54441
Q ss_pred hhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCC
Q psy775 883 EALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMP 962 (1460)
Q Consensus 883 ~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~ 962 (1460)
|.++ ..+++++|.|++++|++|..+++.+
T Consensus 318 -------------------------------------------v~~~--------~~G~lv~~~d~~~la~~i~~ll~~~ 346 (372)
T cd04949 318 -------------------------------------------IEDG--------ENGYLVPKGDIEALAEAIIELLNDP 346 (372)
T ss_pred -------------------------------------------cccC--------CCceEeCCCcHHHHHHHHHHHHcCH
Confidence 1111 3568999999999999999999987
Q ss_pred HHHHHHHHHHHHhHHHhcCHHHHHH
Q psy775 963 EDERTLRMNYLRKREKVHDVNYWMR 987 (1460)
Q Consensus 963 ~~er~~r~~~~~~~v~~~~~~~W~~ 987 (1460)
...++.+.+ .++...++++..+++
T Consensus 347 ~~~~~~~~~-a~~~~~~~s~~~~~~ 370 (372)
T cd04949 347 KLLQKFSEA-AYENAERYSEENVWE 370 (372)
T ss_pred HHHHHHHHH-HHHHHHHhhHHHHHh
Confidence 554444444 344566666666554
No 130
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.58 E-value=8.1e-14 Score=170.75 Aligned_cols=177 Identities=14% Similarity=0.142 Sum_probs=129.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+..+|.+|+|+.+.||....++|+.++++++|++ .|+.+|.+ + .++++++++.+.+. ..
T Consensus 396 ~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdi----rLvIVGdG-----~----~~eeLk~la~elgL-------~d 455 (578)
T PRK15490 396 DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPAT----RFVLVGDG-----D----LRAEAQKRAEQLGI-------LE 455 (578)
T ss_pred CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCe----EEEEEeCc-----h----hHHHHHHHHHHcCC-------CC
Confidence 44568899999999999999999999999999874 57767643 2 34556666655442 23
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.|.|. .+++..+|+.||++|+||.+|||+++++||||| +.|+|+|..+|..+.
T Consensus 456 ~V~FlG~--~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~-----GlPVVATdvGG~~Ei------------------ 510 (578)
T PRK15490 456 RILFVGA--SRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMV-----GVPVISTPAGGSAEC------------------ 510 (578)
T ss_pred cEEECCC--hhhHHHHHHhCCEEEEcccccCccHHHHHHHHh-----CCCEEEeCCCCcHHH------------------
Confidence 3777776 468899999999999999999999999999999 789999999887771
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCH--HHHHHHHHHHHhH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPE--DERTLRMNYLRKR 976 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~--~er~~r~~~~~~~ 976 (1460)
|.++ .++++|+|.|++++++++..+..+.. .++....+..+++
T Consensus 511 ---------------------------V~dG--------~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~ 555 (578)
T PRK15490 511 ---------------------------FIEG--------VSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSF 555 (578)
T ss_pred ---------------------------cccC--------CcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122 34689999999999988754433222 1222111233454
Q ss_pred H-HhcCHHHHHHHHHHHHhh
Q psy775 977 E-KVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 977 v-~~~~~~~W~~~~l~~l~~ 995 (1460)
+ .+++++..+.++++.++.
T Consensus 556 V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 556 LQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHhhCCHHHHHHHHHHHHHh
Confidence 4 568888888877776653
No 131
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.58 E-value=4.2e-14 Score=179.70 Aligned_cols=174 Identities=16% Similarity=0.128 Sum_probs=132.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+.++|++|+|+++.||+...++||.++++++|++ .|+.+|.+. .++++++++.+.+- ..
T Consensus 515 ~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~----~LvIvG~G~---------~~~~L~~l~~~lgL-------~~ 574 (694)
T PRK15179 515 DARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKV----RFIMVGGGP---------LLESVREFAQRLGM-------GE 574 (694)
T ss_pred CCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCe----EEEEEccCc---------chHHHHHHHHHcCC-------CC
Confidence 34678999999999999999999999999999975 577777532 23456666665543 23
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.|.|..+ ++..+|+.||++|+||.+|||+++++|||+| +.|+|+|..+|..+.+
T Consensus 575 ~V~flG~~~--dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~-----G~PVVat~~gG~~EiV----------------- 630 (694)
T PRK15179 575 RILFTGLSR--RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFS-----GVPVVTTLAGGAGEAV----------------- 630 (694)
T ss_pred cEEEcCCcc--hHHHHHHhcCEEEeccccccchHHHHHHHHc-----CCeEEEECCCChHHHc-----------------
Confidence 477888754 7889999999999999999999999999999 7899999998877611
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCH--HHHHHHHHHHhCCCHHHHHHHHHHHHhH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEI--DAAAEVIHRALTMPEDERTLRMNYLRKR 976 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~--~~iA~ai~~aL~m~~~er~~r~~~~~~~ 976 (1460)
.++ ..+++|+|.|+ ++++++|.+++.........+.+. +++
T Consensus 631 ----------------------------~dg--------~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~a-r~~ 673 (694)
T PRK15179 631 ----------------------------QEG--------VTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKA-ADW 673 (694)
T ss_pred ----------------------------cCC--------CCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHH-HHH
Confidence 111 24689998875 689999988887654444444443 444
Q ss_pred H-HhcCHHHHHHHHHHHH
Q psy775 977 E-KVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 977 v-~~~~~~~W~~~~l~~l 993 (1460)
+ ..+++...++++++-+
T Consensus 674 a~~~FS~~~~~~~~~~lY 691 (694)
T PRK15179 674 ASARFSLNQMIASTVRCY 691 (694)
T ss_pred HHHhCCHHHHHHHHHHHh
Confidence 4 5788888877776654
No 132
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.58 E-value=5e-14 Score=168.94 Aligned_cols=180 Identities=16% Similarity=0.227 Sum_probs=124.1
Q ss_pred EEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHH----HHHHHHHHhCCCCCCcEEEEEEEcCCC
Q psy775 312 VRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRL----KAFETLLEKHPEHLEKVTLLQIAVPSR 387 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL----~Af~~lL~~~P~~~~kvvLvqig~psr 387 (1460)
.++.++|+|||.+.|.+....... ...++++|+++||+++.||+..++ +++..+.+++|+++ |+++|..
T Consensus 196 ~~v~vipngvd~~~f~~~~~~~~~-~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~g-- 268 (397)
T TIGR03087 196 GRITAFPNGVDADFFSPDRDYPNP-YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGAK-- 268 (397)
T ss_pred CCeEEeecccchhhcCCCccccCC-CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECCC--
Confidence 467889999999988653221111 113567899999999999999988 56777777888763 6555532
Q ss_pred CChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC-CCCCCcceeeeeeeccCCCC
Q psy775 388 TDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPP 466 (1460)
Q Consensus 388 ~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl-rEGfnLValEamAcq~~~~~ 466 (1460)
+. . ++.++. .. .. +.+.|.++ ++..+|+.||++|+||. .||++++++||||| |
T Consensus 269 ---~~-~----~~~~l~----~~------~~-V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~-----G 322 (397)
T TIGR03087 269 ---PS-P----AVRALA----AL------PG-VTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAM-----A 322 (397)
T ss_pred ---Ch-H----HHHHhc----cC------CC-eEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHc-----C
Confidence 11 1 222221 11 11 34568887 67899999999999997 59999999999999 6
Q ss_pred CeEEEcCCCCchhc-c-cccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 467 GVLIVSPFAGAGEQ-M-HEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 467 GvlVlSe~aGaa~~-L-~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.|+|+|..++.... . ..++++. .|++++|++|.++++++...++++.++......+++
T Consensus 323 ~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fs 382 (397)
T TIGR03087 323 KPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLANPAEREELGQAARRRVLQHYH 382 (397)
T ss_pred CCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCC
Confidence 67788876432111 1 2378885 899999999999998766555555444444445555
No 133
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.58 E-value=1.3e-13 Score=158.52 Aligned_cols=163 Identities=22% Similarity=0.326 Sum_probs=124.3
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++|+++||+.+.||+...++|+.++.++.|+ +.|+.+|.+. ..+++++++.+.+. .+
T Consensus 200 ~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~----~~l~i~G~~~---------~~~~~~~~~~~~~~-------~~ 259 (374)
T cd03817 200 EDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPD----VKLVIVGDGP---------EREELEELARELGL-------AD 259 (374)
T ss_pred CCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCC----eEEEEEeCCc---------hHHHHHHHHHHcCC-------CC
Confidence 4578899999999999999999999998887665 4566666431 22344444444332 23
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|.++++++..+|+.||+++.||..||+|++.+|||+| +.|+|+|..+|..+.+
T Consensus 260 ~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~-----g~PvI~~~~~~~~~~i----------------- 317 (374)
T cd03817 260 RVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAA-----GLPVVAVDAPGLPDLV----------------- 317 (374)
T ss_pred cEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHc-----CCcEEEeCCCChhhhe-----------------
Confidence 477789999999999999999999999999999999999999 7899999988766511
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
.. -..++++++.|. +++++|.++++++...++.+.+ .++++.
T Consensus 318 ----------------------------~~--------~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~-~~~~~~ 359 (374)
T cd03817 318 ----------------------------AD--------GENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKN-AEESAE 359 (374)
T ss_pred ----------------------------ec--------CceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHH-HHHHHH
Confidence 01 135688999888 9999999999987765444433 455665
Q ss_pred hcC
Q psy775 979 VHD 981 (1460)
Q Consensus 979 ~~~ 981 (1460)
.++
T Consensus 360 ~~~ 362 (374)
T cd03817 360 KFS 362 (374)
T ss_pred HHH
Confidence 554
No 134
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.57 E-value=2.1e-14 Score=162.61 Aligned_cols=172 Identities=20% Similarity=0.287 Sum_probs=129.7
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+++.++++||+.+.||+...++|+.++.+.+|++ .|+.+|.+. .. ..+.+++.+.+ ..+
T Consensus 176 ~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~----~l~i~G~~~-----~~----~~~~~~~~~~~-------~~~ 235 (348)
T cd03820 176 LKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDW----KLRIVGDGP-----ER----EALEALIKELG-------LED 235 (348)
T ss_pred CCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCe----EEEEEeCCC-----CH----HHHHHHHHHcC-------CCC
Confidence 34678999999999999999999999998888874 566555332 11 23333444433 234
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|. .+++..+|+.||+++.||..||||++.+|||+| +.|+|+|...|..+.+
T Consensus 236 ~v~~~g~--~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~-----G~Pvi~~~~~~~~~~~----------------- 291 (348)
T cd03820 236 RVILLGF--TKNIEEYYAKASIFVLTSRFEGFPMVLLEAMAF-----GLPVISFDCPTGPSEI----------------- 291 (348)
T ss_pred eEEEcCC--cchHHHHHHhCCEEEeCccccccCHHHHHHHHc-----CCCEEEecCCCchHhh-----------------
Confidence 5667766 789999999999999999999999999999999 7889999876544310
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
+. ....++++++.|+++++++|.++++.++..++.+.+. .+.++
T Consensus 292 ---------------------------~~--------~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~ 335 (348)
T cd03820 292 ---------------------------IE--------DGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGANA-RESAE 335 (348)
T ss_pred ---------------------------hc--------cCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHHH-HHHHH
Confidence 00 0125689999999999999999998776655555555 77888
Q ss_pred hcCHHHHHHHHH
Q psy775 979 VHDVNYWMRSFL 990 (1460)
Q Consensus 979 ~~~~~~W~~~~l 990 (1460)
+++++.+++++.
T Consensus 336 ~~~~~~~~~~~~ 347 (348)
T cd03820 336 RFSIENIIKQWE 347 (348)
T ss_pred HhCHHHHHHHhc
Confidence 888888877653
No 135
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.56 E-value=2.3e-13 Score=156.75 Aligned_cols=169 Identities=20% Similarity=0.252 Sum_probs=130.4
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++++++||+.+.||+...++|+.++.++ |++ .|+.+|.+. +. ..+. .. .+
T Consensus 195 ~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~-~~~----~l~i~G~~~-----~~----~~~~----~~---------~~ 247 (364)
T cd03814 195 PDRPVLLYVGRLAPEKNLEALLDADLPLRRR-PPV----RLVIVGDGP-----AR----ARLE----AR---------YP 247 (364)
T ss_pred CCCeEEEEEeccccccCHHHHHHHHHHhhhc-CCc----eEEEEeCCc-----hH----HHHh----cc---------CC
Confidence 4567899999999999999999999998776 654 566666431 11 1111 11 12
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
-+.+.|.++.+++..+|+.||+++.||..||+|++++||||| +.|+|+|..+|..+.+.
T Consensus 248 ~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~-----g~PvI~~~~~~~~~~i~---------------- 306 (364)
T cd03814 248 NVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMAS-----GLPVVAPDAGGPADIVT---------------- 306 (364)
T ss_pred cEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHc-----CCCEEEcCCCCchhhhc----------------
Confidence 256778899999999999999999999999999999999999 78999999888666211
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
....+++++|.|.++++++|.++++.++...+.. +..++.+.
T Consensus 307 -------------------------------------~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~-~~~~~~~~ 348 (364)
T cd03814 307 -------------------------------------DGENGLLVEPGDAEAFAAALAALLADPELRRRMA-ARARAEAE 348 (364)
T ss_pred -------------------------------------CCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHH-HHHHHHHh
Confidence 1134689999999999999999998766554444 44466668
Q ss_pred hcCHHHHHHHHHHHH
Q psy775 979 VHDVNYWMRSFLKGM 993 (1460)
Q Consensus 979 ~~~~~~W~~~~l~~l 993 (1460)
.+++..+++++++-+
T Consensus 349 ~~~~~~~~~~~~~~~ 363 (364)
T cd03814 349 RRSWEAFLDNLLEAY 363 (364)
T ss_pred hcCHHHHHHHHHHhh
Confidence 889999988887654
No 136
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.56 E-value=1.8e-13 Score=162.11 Aligned_cols=173 Identities=13% Similarity=0.092 Sum_probs=122.2
Q ss_pred CCEEEEEEcCcc--ccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy775 740 KQKIVLGVDRLD--YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 817 (1460)
Q Consensus 740 ~kkiIl~VdRLd--~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~ 817 (1460)
++++++++||+. +.||+...++|+.++. + ++.|+.+|.+. + ++++++++++.|..
T Consensus 179 ~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~----~~~l~ivG~g~-----~----~~~l~~~~~~~~l~------- 235 (359)
T PRK09922 179 KPAVFLYVGRLKFEGQKNVKELFDGLSQTT---G----EWQLHIIGDGS-----D----FEKCKAYSRELGIE------- 235 (359)
T ss_pred CCcEEEEEEEEecccCcCHHHHHHHHHhhC---C----CeEEEEEeCCc-----c----HHHHHHHHHHcCCC-------
Confidence 456789999996 5699999999998752 2 46777777542 2 23455555554322
Q ss_pred cEEEEcCCC--CHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcC-CCCcchhhhhhhhcCcccchh
Q psy775 818 PIRYIYGCI--SQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP-FAGAGEQMHEALICNPYEIDA 894 (1460)
Q Consensus 818 pvv~~~g~v--~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe-~aG~~~~L~~~l~vnP~~~~~ 894 (1460)
..+.|.|.+ +.+++..+|+.||++++||..|||+++++||||| +.|+|+|. .+|..++
T Consensus 236 ~~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~-----G~Pvv~s~~~~g~~ei-------------- 296 (359)
T PRK09922 236 QRIIWHGWQSQPWEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSY-----GIPCISSDCMSGPRDI-------------- 296 (359)
T ss_pred CeEEEecccCCcHHHHHHHHhcCcEEEECCcccCcChHHHHHHHc-----CCCEEEeCCCCChHHH--------------
Confidence 337777865 4589999999999999999999999999999999 78999999 7776651
Q ss_pred hhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy775 895 AAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 974 (1460)
Q Consensus 895 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~ 974 (1460)
|.++ ..+++++|.|++++|++|.+.++.+.... .+.+.
T Consensus 297 -------------------------------v~~~--------~~G~lv~~~d~~~la~~i~~l~~~~~~~~---~~~~~ 334 (359)
T PRK09922 297 -------------------------------IKPG--------LNGELYTPGNIDEFVGKLNKVISGEVKYQ---HDAIP 334 (359)
T ss_pred -------------------------------ccCC--------CceEEECCCCHHHHHHHHHHHHhCcccCC---HHHHH
Confidence 1111 34589999999999999999998875311 12223
Q ss_pred hHHHhcCHHHHHHHHHHHHhhh
Q psy775 975 KREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 975 ~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
+.+..+..+...+++.+.+.+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~ 356 (359)
T PRK09922 335 NSIERFYEVLYFKNLNNALFSK 356 (359)
T ss_pred HHHHHhhHHHHHHHHHHHHHHH
Confidence 3334444455555555555443
No 137
>PLN02275 transferase, transferring glycosyl groups
Probab=99.56 E-value=2.6e-14 Score=170.39 Aligned_cols=161 Identities=11% Similarity=0.114 Sum_probs=116.1
Q ss_pred EEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHH-----------------hCCCCCCc
Q psy775 314 IRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLE-----------------KHPEHLEK 376 (1460)
Q Consensus 314 V~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~-----------------~~P~~~~k 376 (1460)
+.++|+|+ .+.|.+.... .........+++++||+.+.||+..+++|+..+.. ++|+
T Consensus 188 i~vi~n~~-~~~f~~~~~~-~~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~---- 261 (371)
T PLN02275 188 ATVLYDQP-PEFFRPASLE-IRLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR---- 261 (371)
T ss_pred eEEECCCC-HHHcCcCCch-hcccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----
Confidence 67888884 4666543211 11111344678899999999999999999988752 2454
Q ss_pred EEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc---CCCCCCcc
Q psy775 377 VTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP---LRDGMNLV 453 (1460)
Q Consensus 377 vvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS---lrEGfnLV 453 (1460)
+.|+.+|.+ ++.+++++. +.+.+ ...++++.+.++.+++..+|++||++|+|+ ..|||+.+
T Consensus 262 i~l~ivG~G-----~~~~~l~~~----~~~~~-------l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~ 325 (371)
T PLN02275 262 LLFIITGKG-----PQKAMYEEK----ISRLN-------LRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMK 325 (371)
T ss_pred eEEEEEeCC-----CCHHHHHHH----HHHcC-------CCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHH
Confidence 557777643 333344443 33322 234677767899999999999999999853 34899999
Q ss_pred eeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHc
Q psy775 454 AKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRAL 503 (1460)
Q Consensus 454 alEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL 503 (1460)
.+||||| |.|+|+|..+|..+.+.+ |++|+ |++++|++|.++|
T Consensus 326 llEAmA~-----G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 326 VVDMFGC-----GLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred HHHHHHC-----CCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9999999 677799998888877742 88996 6999999998875
No 138
>PHA01630 putative group 1 glycosyl transferase
Probab=99.54 E-value=1.1e-13 Score=163.15 Aligned_cols=183 Identities=14% Similarity=0.052 Sum_probs=130.6
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
++.++.+++|+.+.||+..+++|++++.+++|+ +.++.+|... . + .++. .++
T Consensus 141 ~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~----~~llivG~~~----~---~--~~l~----~~~----------- 192 (331)
T PHA01630 141 HPCVLAILPHSWDRKGGDIVVKIFHELQNEGYD----FYFLIKSSNM----L---D--PRLF----GLN----------- 192 (331)
T ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHhhCCC----EEEEEEeCcc----c---c--hhhc----ccc-----------
Confidence 345677788999999999999999999888776 4666666211 0 0 1111 011
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhh
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
-+.+.++.+++..+|+.||++++||..||||++++||||| +.|+|+|..+|..+.+.
T Consensus 193 -~~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~-----G~PVIas~~gg~~E~i~----------------- 249 (331)
T PHA01630 193 -GVKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL-----GLDVVVTEKGAWSEWVL----------------- 249 (331)
T ss_pred -ceeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc-----CCCEEEeCCCCchhhcc-----------------
Confidence 1235688999999999999999999999999999999999 78999999888776211
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEecccc-----CCcccccceEEeCCCCHHHHHHHHHHHhCCC--HHHHHHHHHH
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFA-----GAGEQMHEALICNPYEIDAAAEVIHRALTMP--EDERTLRMNY 972 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~-----G~~~~l~~allVnP~d~~~iA~ai~~aL~m~--~~er~~r~~~ 972 (1460)
++..|.+|-.+.. .+ .-+.+++++| |.+++++++.++|..+ ++.++...++
T Consensus 250 -------------------~~~ng~lv~~~~~~~~~~~~--~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~~~~~~~~~~ 307 (331)
T PHA01630 250 -------------------SNLDVYWIKSGRKPKLWYTN--PIHVGYFLDP-DIEDAYQKLLEALANWTPEKKKENLEGR 307 (331)
T ss_pred -------------------CCCceEEeeecccccccccC--CcccccccCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 1223444433210 00 0134678888 7888999999999875 4445555555
Q ss_pred HHhHHHhcCHHHHHHHHHHHHhh
Q psy775 973 LRKREKVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 973 ~~~~v~~~~~~~W~~~~l~~l~~ 995 (1460)
...+.++++++..++++++-++.
T Consensus 308 ~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 308 AILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhc
Confidence 56678899999999998887753
No 139
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.53 E-value=2.7e-14 Score=150.53 Aligned_cols=152 Identities=30% Similarity=0.501 Sum_probs=114.9
Q ss_pred cCCeEEEEecCccccCCHHHHHHHHHHHHHh-CCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcc
Q psy775 339 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 417 (1460)
Q Consensus 339 ~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~-~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~ 417 (1460)
.++++|+++||+++.||+..+++|+..+.++ .|++ .++.+| +++....++ ..+...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G-----~~~~~~~~~----~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNY----KLVIVG-----DGEYKKELK----NLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTE----EEEEES-----HCCHHHHHH----HHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCe----EEEEEc-----ccccccccc----ccccccccc------c
Confidence 5788999999999999999999999999875 6654 466555 222222333 333332221 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHH
Q psy775 418 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDA 494 (1460)
Q Consensus 418 pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~e 494 (1460)
.+. +.+.++.+++..+|+.||++|.||..||||++++|||+| +.|+|+|..+|..+.+.+ |++++|.|+++
T Consensus 74 ~i~-~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~-----g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~ 147 (172)
T PF00534_consen 74 NII-FLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC-----GCPVIASDIGGNNEIINDGVNGFLFDPNDIEE 147 (172)
T ss_dssp TEE-EEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT-----T-EEEEESSTHHHHHSGTTTSEEEESTTSHHH
T ss_pred ccc-ccccccccccccccccceecccccccccccccccccccc-----ccceeeccccCCceeeccccceEEeCCCCHHH
Confidence 244 458888999999999999999999999999999999999 788899998777777743 79999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHH
Q psy775 495 AAEVIHRALTMPEDERTLRMN 515 (1460)
Q Consensus 495 lA~AI~~aL~m~~~er~~R~~ 515 (1460)
++++|.+++.+++..+.++.+
T Consensus 148 l~~~i~~~l~~~~~~~~l~~~ 168 (172)
T PF00534_consen 148 LADAIEKLLNDPELRQKLGKN 168 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHH
Confidence 999999999977544444433
No 140
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.53 E-value=6.1e-13 Score=153.01 Aligned_cols=277 Identities=17% Similarity=0.132 Sum_probs=177.4
Q ss_pred Cceeecccc-ccccHHHHHHHHhhcCcCceEEEEeeCCCCCcccccc-----C---ccHHHHH-hhcccCceeecccHhH
Q psy775 568 PLVWIHDYH-LMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRL-----F---PWSDEIL-QGMLGCDMVGFHIEDY 637 (1460)
Q Consensus 568 diIwIhDYh-L~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~-----l---P~r~eIL-~~LL~aDlIGFqt~~y 637 (1460)
|+|++|... ....+.... ......++.+.+|-.+|....... . .....+. ..+-.+|.|-+.+...
T Consensus 101 D~v~~~~~~~~~~~~~~~~----~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 101 DVIIATSPPLLIALAALLL----ARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred CEEEEcCChHHHHHHHHHH----HHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 789999733 333333222 223356788888865543221110 0 1111121 2345678888888877
Q ss_pred HHHHHHHHHHHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHh
Q psy775 638 CLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717 (1460)
Q Consensus 638 ar~FL~~c~rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~ 717 (1460)
++.|.. ++....++.++|+|+|...+...... .. +.
T Consensus 177 ~~~~~~------------------~~~~~~~~~~i~~~~~~~~~~~~~~~-------------------------~~-~~ 212 (394)
T cd03794 177 REYLVR------------------RGVPPEKISVIPNGVDLELFKPPPAD-------------------------ES-LR 212 (394)
T ss_pred HHHHHh------------------cCCCcCceEEcCCCCCHHHcCCccch-------------------------hh-hh
Confidence 776551 11223467889999998765432110 00 11
Q ss_pred hhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHH
Q psy775 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLK 797 (1460)
Q Consensus 718 ~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~ 797 (1460)
... ...++.+++++||+.+.||+...++|+.++.+. |+ +.|+.+|.+ +..
T Consensus 213 ~~~----------------~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~-~~----~~l~i~G~~-----~~~---- 262 (394)
T cd03794 213 KEL----------------GLDDKFVVLYAGNIGRAQGLDTLLEAAALLKDR-PD----IRFLIVGDG-----PEK---- 262 (394)
T ss_pred hcc----------------CCCCcEEEEEecCcccccCHHHHHHHHHHHhhc-CC----eEEEEeCCc-----ccH----
Confidence 100 125678899999999999999999999998776 55 456655533 222
Q ss_pred HHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCC-----CccceeeeeeccCCCCceEEEc
Q psy775 798 EEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGM-----NLVAKEFVACQINEPPGVLIVS 872 (1460)
Q Consensus 798 ~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGm-----nLva~EymAc~~~~~~g~lIlS 872 (1460)
+.+.+.+..- +... +.+.|.++++++..+|+.||+++.||..|++ +...+|||+| |.|+|+|
T Consensus 263 ~~~~~~~~~~-------~~~~-v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~-----G~pvi~~ 329 (394)
T cd03794 263 EELKELAKAL-------GLDN-VTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAA-----GKPVLAS 329 (394)
T ss_pred HHHHHHHHHc-------CCCc-EEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHC-----CCcEEEe
Confidence 2222222111 1122 4456799999999999999999999999976 4457999999 7899999
Q ss_pred CCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHH
Q psy775 873 PFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 952 (1460)
Q Consensus 873 e~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA 952 (1460)
..+|..+.+. ....++++++.|+++++
T Consensus 330 ~~~~~~~~~~-----------------------------------------------------~~~~g~~~~~~~~~~l~ 356 (394)
T cd03794 330 VDGESAELVE-----------------------------------------------------EAGAGLVVPPGDPEALA 356 (394)
T ss_pred cCCCchhhhc-----------------------------------------------------cCCcceEeCCCCHHHHH
Confidence 9998776111 01346889999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHhHHH-hcCHHHHHHHH
Q psy775 953 EVIHRALTMPEDERTLRMNYLRKREK-VHDVNYWMRSF 989 (1460)
Q Consensus 953 ~ai~~aL~m~~~er~~r~~~~~~~v~-~~~~~~W~~~~ 989 (1460)
++|.++++.+....+.+.+. ++++. .++++.+++++
T Consensus 357 ~~i~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 357 AAILELLDDPEERAEMGENG-RRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHhChHHHHHHHHHH-HHHHHHhhcHHHHHHhc
Confidence 99999997665544444444 55555 78888888765
No 141
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.51 E-value=1.3e-12 Score=148.75 Aligned_cols=173 Identities=21% Similarity=0.248 Sum_probs=128.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++.+++++||+.+.||+...++|+..+.+++|+ +.|+.+|...... + .... ++.+.+. .+
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~----~~l~i~G~~~~~~---~--~~~~---~~~~~~~-------~~ 246 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPN----VRLLLVGDGDEEN---P--AAIL---EIEKLGL-------EG 246 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCC----eEEEEEcCCCcch---h--hHHH---HHHhcCC-------cc
Confidence 4567899999999999999999999999887876 4666666554221 1 1111 1222221 23
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEV 898 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~ 898 (1460)
.+.+.|. .+++..+|+.||+++.||.+||++++.+|||+| +.|+|+|..+|..+.+.
T Consensus 247 ~v~~~g~--~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~-----G~Pvi~s~~~~~~~~i~---------------- 303 (359)
T cd03808 247 RVEFLGF--RDDVPELLAAADVFVLPSYREGLPRVLLEAMAM-----GRPVIATDVPGCREAVI---------------- 303 (359)
T ss_pred eEEEeec--cccHHHHHHhccEEEecCcccCcchHHHHHHHc-----CCCEEEecCCCchhhhh----------------
Confidence 3556666 678999999999999999999999999999999 78999999888766110
Q ss_pred hhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHH
Q psy775 899 IFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREK 978 (1460)
Q Consensus 899 ~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~ 978 (1460)
....++++++.|+++++++|.+++..+...++...+.......
T Consensus 304 -------------------------------------~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 304 -------------------------------------DGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEE 346 (359)
T ss_pred -------------------------------------cCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 0134688999999999999999888766655555555444478
Q ss_pred hcCHHHHHHHHH
Q psy775 979 VHDVNYWMRSFL 990 (1460)
Q Consensus 979 ~~~~~~W~~~~l 990 (1460)
.++...++++++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 888888887764
No 142
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.50 E-value=3.7e-12 Score=146.16 Aligned_cols=166 Identities=20% Similarity=0.286 Sum_probs=120.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++.+++++||+.+.||+...++|+.++.+ |+ +.|+.+|...... ...... + ..+
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~--~~----~~l~i~G~~~~~~-----~~~~~~-------~-------~~~ 243 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPR--GD----IELVIVGNGLELE-----EESYEL-------E-------GDP 243 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHh--cC----cEEEEEcCchhhh-----HHHHhh-------c-------CCC
Confidence 456789999999999999999999999866 44 5677666543211 111111 1 123
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCC-ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSl-rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
.+.+.|.++.+++..+|+.||+++.||. .||++++++|||+| +.|+|+|+.+|..+.+.
T Consensus 244 ~v~~~g~~~~~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~-----G~Pvi~~~~~~~~e~i~--------------- 303 (359)
T cd03823 244 RVEFLGAYPQEEIDDFYAEIDVLVVPSIWPENFPLVIREALAA-----GVPVIASDIGGMAELVR--------------- 303 (359)
T ss_pred eEEEeCCCCHHHHHHHHHhCCEEEEcCcccCCCChHHHHHHHC-----CCCEEECCCCCHHHHhc---------------
Confidence 4777899999999999999999999998 79999999999999 78999999888665111
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHH
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 977 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v 977 (1460)
.-..+++++|.|+++++++|.++++.+...+..+.+ .++.+
T Consensus 304 --------------------------------------~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~-~~~~~ 344 (359)
T cd03823 304 --------------------------------------DGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAG-IEPPR 344 (359)
T ss_pred --------------------------------------CCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHh-HHHhh
Confidence 012468999999999999999999965544444433 34443
Q ss_pred HhcCHHHHHHHHHH
Q psy775 978 KVHDVNYWMRSFLK 991 (1460)
Q Consensus 978 ~~~~~~~W~~~~l~ 991 (1460)
.. ..+++++++
T Consensus 345 ~~---~~~~~~~~~ 355 (359)
T cd03823 345 SI---EDQAEEYLK 355 (359)
T ss_pred hH---HHHHHHHHH
Confidence 33 455555444
No 143
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.49 E-value=2.3e-12 Score=149.38 Aligned_cols=157 Identities=24% Similarity=0.265 Sum_probs=119.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++|+++||+.+.||+...++|++++. ++.|+.+|.+. ...++.+++.+.+. .+
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~--------~~~l~i~G~g~---------~~~~~~~~~~~~~~-------~~ 244 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDVLLEAAAALP--------DAPLVIVGEGP---------LEAELEALAAALGL-------LD 244 (357)
T ss_pred CCCcEEEEecccccccCHHHHHHHHHhcc--------CcEEEEEeCCh---------hHHHHHHHHHhcCC-------cc
Confidence 45778999999999999999999998863 46677776432 22344444433332 23
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCC--ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPL--RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 896 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSl--rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~ 896 (1460)
-+.+.|.++++++..+|+.||++++||. .||+|++.+|||+| +.|+|+|+.+|..+.+.
T Consensus 245 ~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~-----g~Pvi~~~~~~~~~~i~-------------- 305 (357)
T cd03795 245 RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAF-----GKPVISTEIGTGGSYVN-------------- 305 (357)
T ss_pred eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHc-----CCCEEecCCCCchhHHh--------------
Confidence 4778899999999999999999999996 59999999999999 78999999888666110
Q ss_pred hhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhH
Q psy775 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 976 (1460)
Q Consensus 897 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~ 976 (1460)
. . -..+++++|.|+++++++|.++++++....+.+.++ +++
T Consensus 306 -------------------------------~--~-----~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~-~~~ 346 (357)
T cd03795 306 -------------------------------L--H-----GVTGLVVPPGDPAALAEAIRRLLEDPELRERLGEAA-RER 346 (357)
T ss_pred -------------------------------h--C-----CCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHHHH-HHH
Confidence 0 0 134688999999999999999999776655555544 444
Q ss_pred H
Q psy775 977 E 977 (1460)
Q Consensus 977 v 977 (1460)
+
T Consensus 347 ~ 347 (357)
T cd03795 347 A 347 (357)
T ss_pred H
Confidence 4
No 144
>PLN02151 trehalose-phosphatase
Probab=99.47 E-value=5.1e-14 Score=165.14 Aligned_cols=85 Identities=36% Similarity=0.605 Sum_probs=79.3
Q ss_pred CCC--CCCChhhHHHHHHHhhcCCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHH
Q psy775 1372 TTM--QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM 1449 (1460)
Q Consensus 1372 ~~~--~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~ 1449 (1460)
.|+ +|++++.|+++++. ++++++++||||||||+||+++|+.|.++++++++|++|++.+ +|||||||+++++.
T Consensus 75 ~w~~~~p~a~~~~~~~~~~--~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~~--~vaIvSGR~~~~l~ 150 (354)
T PLN02151 75 CWIKEHPSALNMFEEILHK--SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKCF--PTAIVSGRCREKVS 150 (354)
T ss_pred HHHHhCChHHHHHHHHHHh--hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcCC--CEEEEECCCHHHHH
Confidence 566 99999999999987 5678999999999999999999999999999999999999765 89999999999999
Q ss_pred HhcCCCCcccC
Q psy775 1450 EMVGIEGLTYA 1460 (1460)
Q Consensus 1450 ~~~~~~~~~ya 1460 (1460)
+++++++++||
T Consensus 151 ~~~~~~~l~la 161 (354)
T PLN02151 151 SFVKLTELYYA 161 (354)
T ss_pred HHcCCccceEE
Confidence 99999999886
No 145
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.47 E-value=1.6e-12 Score=157.22 Aligned_cols=162 Identities=12% Similarity=0.043 Sum_probs=111.5
Q ss_pred CCCEEEEEEcC-c-cccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 739 TKQKIVLGVDR-L-DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 739 ~~kkiIl~VdR-L-d~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
.++++|++|+| + ++.||+..+++|+.++ .+ ++.|+.+|.+.... .
T Consensus 239 ~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~ivG~g~~~~-----------~--------------- 285 (405)
T PRK10125 239 QGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHTFGKFSPFT-----------A--------------- 285 (405)
T ss_pred CCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEEEcCCCccc-----------c---------------
Confidence 45678999999 4 4789999999999874 23 35677777532110 0
Q ss_pred ccEEEEcCC-CCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhh
Q psy775 817 SPIRYIYGC-ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAA 895 (1460)
Q Consensus 817 ~pvv~~~g~-v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~ 895 (1460)
..+. +.|. .+.+++..+|+.||+||+||..|||++|++||||| +.|||+|..+|+.++
T Consensus 286 ~~v~-~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~-----G~PVVat~~gG~~Ei--------------- 344 (405)
T PRK10125 286 GNVV-NHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI-----GVPVIATHSDAAREV--------------- 344 (405)
T ss_pred cceE-EecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc-----CCCEEEeCCCChHHh---------------
Confidence 0122 3343 36789999999999999999999999999999999 789999999997661
Q ss_pred hhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 896 AEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 896 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
|.+ .++++|+|.|++++|+++...+.... .+....+...+
T Consensus 345 ------------------------------v~~---------~~G~lv~~~d~~~La~~~~~~~~~~~-~~~~~~~~r~~ 384 (405)
T PRK10125 345 ------------------------------LQK---------SGGKTVSEEEVLQLAQLSKPEIAQAV-FGTTLAEFSQR 384 (405)
T ss_pred ------------------------------EeC---------CcEEEECCCCHHHHHhccCHHHHHHh-hhhHHHHHHHH
Confidence 111 24699999999999986533221100 00001222233
Q ss_pred HHHhcCHHHHHHHHHHHHh
Q psy775 976 REKVHDVNYWMRSFLKGMG 994 (1460)
Q Consensus 976 ~v~~~~~~~W~~~~l~~l~ 994 (1460)
....++....+++.++-++
T Consensus 385 ~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 385 SRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred HHHhCCHHHHHHHHHHHHH
Confidence 4566888888887776554
No 146
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.46 E-value=4e-12 Score=154.03 Aligned_cols=261 Identities=17% Similarity=0.132 Sum_probs=152.6
Q ss_pred CCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCC-CccccccCCCcHHHHhhhc-cCceeeeccHHhHHHHHHH
Q psy775 212 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFP-PWDIFRLFPWSDEILQGML-GCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 212 gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFP-s~eifr~LP~r~eil~gLL-~aDlIgF~t~~yar~FL~~ 289 (1460)
.|+|++|++.++ |.++.... ..++++.+..|.-.+ +...++.+ ..+.+.++ .+|.|-.++....+.+.+
T Consensus 125 Pd~v~~~~~~~~--~~~l~~~~---~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~~~~l~~- 195 (425)
T PRK05749 125 PKLVIIMETELW--PNLIAELK---RRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEEDAERFLA- 195 (425)
T ss_pred CCEEEEEecchh--HHHHHHHH---HCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHHHHHHHH-
Confidence 689999988865 55554321 124566665543222 22222222 12222222 379999999888877765
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecc-cCchhhhhhhccchhhhc---cCCeEEEEecCccccCCHHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIA-IPYERFVQLAQAAPRVID---TKQKIVLGVDRLDYTKGLVHRLKAFET 365 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiG-ID~~~f~~~~~~~~~~~~---~~~kvIL~VgRLd~~KGI~~lL~Af~~ 365 (1460)
+|.. .. +.++|++ +|..............++ .++++++++++. .|+...+++||.+
T Consensus 196 ----~g~~-------------~~-i~vi~n~~~d~~~~~~~~~~~~~~r~~~~~~~~vil~~~~~--~~~~~~ll~A~~~ 255 (425)
T PRK05749 196 ----LGAK-------------NE-VTVTGNLKFDIEVPPELAARAATLRRQLAPNRPVWIAASTH--EGEEELVLDAHRA 255 (425)
T ss_pred ----cCCC-------------CC-cEecccccccCCCChhhHHHHHHHHHHhcCCCcEEEEeCCC--chHHHHHHHHHHH
Confidence 2311 11 2344442 222211110000011111 467788999875 6889999999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHH-HHHHHHHHHHHHHHhcc---cCCCCc----ccEEEEcCCCCHHHHHHHHHh
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEY-QDLKEEMDQLVGRINGR---FTTPNW----SPIRYIYGCISQDELASFYRD 437 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey-~~L~~ev~~lv~~IN~~---fg~~~~----~pIv~~~g~v~~eeL~aLY~a 437 (1460)
+.+++|+++ |+++| ++++. .++++. +.+.+-. |.. +. ...+++.+ +..++..+|+.
T Consensus 256 l~~~~~~~~----liivG-----~g~~r~~~l~~~----~~~~gl~~~~~~~-~~~~~~~~~v~l~~--~~~el~~~y~~ 319 (425)
T PRK05749 256 LLKQFPNLL----LILVP-----RHPERFKEVEEL----LKKAGLSYVRRSQ-GEPPSADTDVLLGD--TMGELGLLYAI 319 (425)
T ss_pred HHHhCCCcE----EEEcC-----CChhhHHHHHHH----HHhCCCcEEEccC-CCCCCCCCcEEEEe--cHHHHHHHHHh
Confidence 998888753 44443 33332 344443 3332221 110 00 01233333 46799999999
Q ss_pred ccEEEE-ccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCch----hcc-cccEEECCCCHHHHHHHHHHHcCCCHHHHH
Q psy775 438 AAVALV-TPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAG----EQM-HEALICNPYEIDAAAEVIHRALTMPEDERT 511 (1460)
Q Consensus 438 ADV~Vv-pSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa----~~L-~~allVNP~D~~elA~AI~~aL~m~~~er~ 511 (1460)
||++++ +|+.||+|++++||||| |.|+|++...|.. +.+ ..|.++.|.|++++|++|.+++++++..++
T Consensus 320 aDi~~v~~S~~e~~g~~~lEAma~-----G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~ 394 (425)
T PRK05749 320 ADIAFVGGSLVKRGGHNPLEPAAF-----GVPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTDPDARQA 394 (425)
T ss_pred CCEEEECCCcCCCCCCCHHHHHHh-----CCCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcCHHHHHH
Confidence 999666 68889999999999999 6677887654433 333 347788899999999999999987655555
Q ss_pred HHHHHHHHHHhh
Q psy775 512 LRMNYLRKREKH 523 (1460)
Q Consensus 512 ~R~~~l~~~v~~ 523 (1460)
+..++ ++.+.+
T Consensus 395 m~~~a-~~~~~~ 405 (425)
T PRK05749 395 YGEAG-VAFLKQ 405 (425)
T ss_pred HHHHH-HHHHHh
Confidence 44433 444433
No 147
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.46 E-value=4e-12 Score=147.94 Aligned_cols=169 Identities=15% Similarity=0.107 Sum_probs=123.5
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
++.++++||+.+.||+...++|+.++.+ ++.|+.+|.+... . .+.+++.+ +.+. .+.+
T Consensus 193 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~~~l~ivG~~~~~--~---~~~~~~~~---~~~~-------~~~V 250 (363)
T cd04955 193 GRYYLLVGRIVPENNIDDLIEAFSKSNS-------GKKLVIVGNADHN--T---PYGKLLKE---KAAA-------DPRI 250 (363)
T ss_pred CcEEEEEecccccCCHHHHHHHHHhhcc-------CceEEEEcCCCCc--c---hHHHHHHH---HhCC-------CCcE
Confidence 4567899999999999999999987632 4567777765322 1 23333332 1111 2336
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCc-cCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLR-DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlr-EGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
.+.|.++++++..+|+.||++++||.. |||+++++|||+| +.|+|+|..+|..+++
T Consensus 251 ~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~-----G~PvI~s~~~~~~e~~------------------ 307 (363)
T cd04955 251 IFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAY-----GCPVLASDNPFNREVL------------------ 307 (363)
T ss_pred EEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHc-----CCCEEEecCCccceee------------------
Confidence 778999999999999999999999999 9999999999999 7899999988765511
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHh
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKV 979 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~ 979 (1460)
+ .++.+++|.|. +|++|.++++++...++.+.+........
T Consensus 308 --------------------------------~-----~~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 348 (363)
T cd04955 308 --------------------------------G-----DKAIYFKVGDD--LASLLEELEADPEEVSAMAKAARERIREK 348 (363)
T ss_pred --------------------------------c-----CCeeEecCchH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 1 13567777776 99999999998766555555543333445
Q ss_pred cCHHHHHHHHHHHH
Q psy775 980 HDVNYWMRSFLKGM 993 (1460)
Q Consensus 980 ~~~~~W~~~~l~~l 993 (1460)
++++.-++++++.+
T Consensus 349 fs~~~~~~~~~~~y 362 (363)
T cd04955 349 YTWEKIADQYEELY 362 (363)
T ss_pred CCHHHHHHHHHHHh
Confidence 78888777776543
No 148
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.44 E-value=6.1e-12 Score=142.48 Aligned_cols=217 Identities=18% Similarity=0.132 Sum_probs=141.0
Q ss_pred Cceeeccc-cccccHHHHHHHHhhcCcCceEEEEeeCCCCCccccccCccHHHHHhhcccCceeecccHhHHHHHHHHHH
Q psy775 568 PLVWIHDY-HLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQ 646 (1460)
Q Consensus 568 diIwIhDY-hL~LlP~~Lr~~~~~~~~~~kigfFLHiPfP~~e~fr~lP~r~eIL~~LL~aDlIGFqt~~yar~FL~~c~ 646 (1460)
|+|++|++ .-.++.. +. ... ..++.+.+|-.++...... .+........+..+|.+-+.+....+.+.+..
T Consensus 83 dii~~~~~~~~~~~~~-~~----~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~- 154 (353)
T cd03811 83 DVVISHLTTTPNVLAL-LA----ARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLKLL- 154 (353)
T ss_pred CEEEEcCccchhHHHH-HH----hhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHHhh-
Confidence 78999987 3222222 22 112 5678888887644322211 11112344455678888777766655544321
Q ss_pred HHhCceeeCCCcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccccchhhHHHHHhhhcCchhHH
Q psy775 647 RRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERF 726 (1460)
Q Consensus 647 rlLg~~~~~~~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~lr~~~~i~~~r~ 726 (1460)
.....++.++|+|+|.+.+...... .. ..+
T Consensus 155 ----------------~~~~~~~~vi~~~~~~~~~~~~~~~-------------------------~~---~~~------ 184 (353)
T cd03811 155 ----------------GIPPDKIEVIYNPIDIEEIRALAEE-------------------------PL---ELG------ 184 (353)
T ss_pred ----------------cCCccccEEecCCcChhhcCcccch-------------------------hh---hcC------
Confidence 1124567889999998765432110 00 000
Q ss_pred HHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q psy775 727 VQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGR 806 (1460)
Q Consensus 727 ~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~ 806 (1460)
...++.+++++||+.+.||+...++|+.++.+++|+. .|+.+|.+. .. .++.+++.+
T Consensus 185 ----------~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~----~l~i~G~~~-----~~----~~~~~~~~~ 241 (353)
T cd03811 185 ----------IPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDA----RLVILGDGP-----LR----EELEALAKE 241 (353)
T ss_pred ----------CCCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCc----eEEEEcCCc-----cH----HHHHHHHHh
Confidence 1256788999999999999999999999998876664 566666432 11 233344444
Q ss_pred HhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcch
Q psy775 807 INGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879 (1460)
Q Consensus 807 IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~ 879 (1460)
.|.. +.+.+.|.. +++..+|+.||+++.||..||++++++|||+| +.|+|+|+.+|..+
T Consensus 242 ~~~~-------~~v~~~g~~--~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~-----G~PvI~~~~~~~~e 300 (353)
T cd03811 242 LGLA-------DRVHFLGFQ--SNPYPYLKAADLFVLSSRYEGFPNVLLEAMAL-----GTPVVATDCPGPRE 300 (353)
T ss_pred cCCC-------ccEEEeccc--CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHh-----CCCEEEcCCCChHH
Confidence 4322 336666664 46789999999999999999999999999999 78999999988766
No 149
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.43 E-value=5.4e-12 Score=154.17 Aligned_cols=262 Identities=19% Similarity=0.199 Sum_probs=180.1
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEec-----CCC-CccccccCCC---c----------HHHHhhhcc
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHI-----PFP-PWDIFRLFPW---S----------DEILQGMLG 271 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHi-----PFP-s~eifr~LP~---r----------~eil~gLL~ 271 (1460)
.+|+|=+||||+-|+|.++++.. .....++..|..|- .|| ...-.-.||. . ..+--|+..
T Consensus 130 ~pDIvH~hDWqt~L~~~~lk~~~-~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ 208 (487)
T COG0297 130 LPDIVHAHDWQTGLLPAYLKQRY-RSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYY 208 (487)
T ss_pred CCCEEEeecHHHHHHHHHHhhcc-cccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhhee
Confidence 48999999999999999999853 12457899999994 344 2233334442 1 334456777
Q ss_pred CceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhcc------------ch-----
Q psy775 272 CDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQA------------AP----- 334 (1460)
Q Consensus 272 aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~------------~~----- 334 (1460)
||.|.--++.|+..-.. ...|... ...+.+ +.-++.-+=+|||.+...+.... ..
T Consensus 209 ad~vttVSptYa~Ei~t---~~~g~gl---~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 209 ADAVTTVSPTYAGEIYT---PEYGEGL---EGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred ccEEEEECHHHHHhhcc---ccccccc---hhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 78887777777765541 0111000 001111 22566667788886554321110 00
Q ss_pred hhhc-------cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHH
Q psy775 335 RVID-------TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI 407 (1460)
Q Consensus 335 ~~~~-------~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~I 407 (1460)
.+.. .+.+++..|+|++..||++.+++|+..++++. + .++.+|.+ + ..+...+..++.+.
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~----~~vilG~g---d----~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--W----QLVLLGTG---D----PELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--c----eEEEEecC---c----HHHHHHHHHHHHhc
Confidence 1111 35689999999999999999999999999987 3 25555533 1 24566777777776
Q ss_pred hcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-----
Q psy775 408 NGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH----- 482 (1460)
Q Consensus 408 N~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~----- 482 (1460)
..++ .+.-..+..--..+|..||++++||..|++||+-++||.- |+++|+.+.+|.++.+.
T Consensus 348 ~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry-----GtvpIv~~tGGLadTV~~~~~~ 413 (487)
T COG0297 348 PGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY-----GTLPIVRETGGLADTVVDRNEW 413 (487)
T ss_pred CceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc-----CCcceEcccCCccceecCccch
Confidence 6642 2222334444447899999999999999999999999987 78999999999998884
Q ss_pred -----c-cEEECCCCHHHHHHHHHHHcCCCHH
Q psy775 483 -----E-ALICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 483 -----~-allVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
+ |+++.|.++++++.||.+|+..-..
T Consensus 414 ~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~ 445 (487)
T COG0297 414 LIQGVGTGFLFLQTNPDHLANALRRALVLYRA 445 (487)
T ss_pred hccCceeEEEEecCCHHHHHHHHHHHHHHhhC
Confidence 2 8899888999999999999875443
No 150
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.43 E-value=8.2e-12 Score=143.93 Aligned_cols=161 Identities=18% Similarity=0.179 Sum_probs=112.6
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
+.+++++||+.+.||+...++|+.+ ++ +.|+.+|.+... + .+...+. +... ..+.+
T Consensus 171 ~~~i~~~Gr~~~~Kg~~~li~~~~~-----~~----~~l~i~G~~~~~---~--~~~~~~~----~~~~------~~~~v 226 (335)
T cd03802 171 GDYLLFLGRISPEKGPHLAIRAARR-----AG----IPLKLAGPVSDP---D--YFYREIA----PELL------DGPDI 226 (335)
T ss_pred CCEEEEEEeeccccCHHHHHHHHHh-----cC----CeEEEEeCCCCH---H--HHHHHHH----Hhcc------cCCcE
Confidence 4578999999999999999998754 23 457767755311 1 1122222 1110 11237
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCC-ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSl-rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
.+.|.++++++..+|+.||++++||. .||||++++||||| +.|+|+|..+|..+.+
T Consensus 227 ~~~G~~~~~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~-----G~PvI~~~~~~~~e~i------------------ 283 (335)
T cd03802 227 EYLGEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMAC-----GTPVIAFRRGAVPEVV------------------ 283 (335)
T ss_pred EEeCCCCHHHHHHHHHhCcEEEeCCcccCCcchHHHHHHhc-----CCCEEEeCCCCchhhe------------------
Confidence 78899999999999999999999997 59999999999999 7899999999877611
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHh
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKV 979 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~ 979 (1460)
.++ .+++++++ +++++++|.+++..+... .| .....+
T Consensus 284 ---------------------------~~~--------~~g~l~~~--~~~l~~~l~~l~~~~~~~--~~----~~~~~~ 320 (335)
T cd03802 284 ---------------------------EDG--------VTGFLVDS--VEELAAAVARADRLDRAA--CR----RRAERR 320 (335)
T ss_pred ---------------------------eCC--------CcEEEeCC--HHHHHHHHHHHhccHHHH--HH----HHHHHh
Confidence 111 24578887 999999999987654321 11 122355
Q ss_pred cCHHHHHHHHHH
Q psy775 980 HDVNYWMRSFLK 991 (1460)
Q Consensus 980 ~~~~~W~~~~l~ 991 (1460)
++++.-++++++
T Consensus 321 ~s~~~~~~~~~~ 332 (335)
T cd03802 321 FSAARMVDDYLA 332 (335)
T ss_pred CCHHHHHHHHHH
Confidence 676666666554
No 151
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.43 E-value=7.2e-13 Score=139.68 Aligned_cols=153 Identities=27% Similarity=0.467 Sum_probs=114.2
Q ss_pred CCCCEEEEEEcCccccCCHHHHHHHHHHHHHh-CCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 738 DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 738 ~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~-~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
..++++|+++||+++.||+...++||..+.++ .|+ +.|+.+|.. .....+...+...+..
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~~---------~~~~~~~~~~~~~~~~------ 72 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN----YKLVIVGDG---------EYKKELKNLIEKLNLK------ 72 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----EEEEEESHC---------CHHHHHHHHHHHTTCG------
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----eEEEEEccc---------cccccccccccccccc------
Confidence 36789999999999999999999999999875 665 456666611 1233444444444432
Q ss_pred ccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhh
Q psy775 817 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 896 (1460)
Q Consensus 817 ~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~ 896 (1460)
.-+.+.+.++.+++.++|+.||+++.||..||+|++.+|||+| +.|+|+|..+|..+.+.
T Consensus 73 -~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~-----g~pvI~~~~~~~~e~~~-------------- 132 (172)
T PF00534_consen 73 -ENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC-----GCPVIASDIGGNNEIIN-------------- 132 (172)
T ss_dssp -TTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT-----T-EEEEESSTHHHHHSG--------------
T ss_pred -ccccccccccccccccccccceecccccccccccccccccccc-----ccceeeccccCCceeec--------------
Confidence 1155567888999999999999999999999999999999999 78999999777665111
Q ss_pred hhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHH
Q psy775 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTL 968 (1460)
Q Consensus 897 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~ 968 (1460)
.-..+++++|.|+++++++|.+++.++.....+
T Consensus 133 ---------------------------------------~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~l 165 (172)
T PF00534_consen 133 ---------------------------------------DGVNGFLFDPNDIEELADAIEKLLNDPELRQKL 165 (172)
T ss_dssp ---------------------------------------TTTSEEEESTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------cccceEEeCCCCHHHHHHHHHHHHCCHHHHHHH
Confidence 012468999999999999999999877433333
No 152
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.42 E-value=1.6e-12 Score=152.34 Aligned_cols=155 Identities=19% Similarity=0.242 Sum_probs=113.6
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
+++++++||+.+.||++..++||+++ | + .|+.+|.+ ++. +++++ .. .+-+
T Consensus 195 ~~~il~~G~~~~~K~~~~li~a~~~~----~-~----~l~ivG~g-----~~~----~~l~~---~~---------~~~V 244 (351)
T cd03804 195 EDYYLSVGRLVPYKRIDLAIEAFNKL----G-K----RLVVIGDG-----PEL----DRLRA---KA---------GPNV 244 (351)
T ss_pred CCEEEEEEcCccccChHHHHHHHHHC----C-C----cEEEEECC-----hhH----HHHHh---hc---------CCCE
Confidence 34688999999999999999999764 3 2 35555643 222 22222 11 1236
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIF 900 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~ 900 (1460)
.+.|.++.+|+.++|+.||++++||. ||||++++||||| +.|+|+|..+|..+.
T Consensus 245 ~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~-----G~Pvi~~~~~~~~e~-------------------- 298 (351)
T cd03804 245 TFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMAS-----GTPVIAYGKGGALET-------------------- 298 (351)
T ss_pred EEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHc-----CCCEEEeCCCCCcce--------------------
Confidence 77899999999999999999999999 9999999999999 789999998886651
Q ss_pred ccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhc
Q psy775 901 CPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVH 980 (1460)
Q Consensus 901 ~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~ 980 (1460)
|.++ ..+++++|.|++++|++|..+++++... .+.+.+....+
T Consensus 299 -------------------------i~~~--------~~G~~~~~~~~~~la~~i~~l~~~~~~~----~~~~~~~~~~~ 341 (351)
T cd03804 299 -------------------------VIDG--------VTGILFEEQTVESLAAAVERFEKNEDFD----PQAIRAHAERF 341 (351)
T ss_pred -------------------------eeCC--------CCEEEeCCCCHHHHHHHHHHHHhCcccC----HHHHHHHHHhc
Confidence 1111 3468999999999999999999887411 12234444556
Q ss_pred CHHHHHHH
Q psy775 981 DVNYWMRS 988 (1460)
Q Consensus 981 ~~~~W~~~ 988 (1460)
+..+..++
T Consensus 342 ~~~~~~~~ 349 (351)
T cd03804 342 SESRFREK 349 (351)
T ss_pred CHHHHHHH
Confidence 66555544
No 153
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.42 E-value=5.1e-12 Score=146.92 Aligned_cols=171 Identities=19% Similarity=0.222 Sum_probs=124.8
Q ss_pred CCCEEEEEEcCccc--cCCHHHHHHHHHHHHHh-CCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKIVLGVDRLDY--TKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~--~KGi~~kL~Afe~fL~~-~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++++++.+++... .||+...++|++.+.++ +| ++.++.+|..... .+. ..
T Consensus 189 ~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~~~~i~G~~~~~---------~~~-----~~-------- 242 (365)
T cd03825 189 ADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DIELVVFGASDPE---------IPP-----DL-------- 242 (365)
T ss_pred CCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----CeEEEEeCCCchh---------hhc-----cC--------
Confidence 45667776666654 99999999999987665 34 4566666644211 000 11
Q ss_pred CccEEEEcCCCC-HHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchh
Q psy775 816 WSPIRYIYGCIS-QDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDA 894 (1460)
Q Consensus 816 ~~pvv~~~g~v~-~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~ 894 (1460)
...+.+.|.++ .+++..+|+.||+++.||..||||++.+|||+| +.|+|+|..+|..+.+
T Consensus 243 -~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~-----g~PvI~~~~~~~~e~~------------- 303 (365)
T cd03825 243 -PFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIEALAC-----GTPVVAFDVGGIPDIV------------- 303 (365)
T ss_pred -CCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHHHHhc-----CCCEEEecCCCChhhe-------------
Confidence 12266778888 889999999999999999999999999999999 7899999988766611
Q ss_pred hhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy775 895 AAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 974 (1460)
Q Consensus 895 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~ 974 (1460)
..+ ..++++++.|++++|++|.++++.+...++...+. +
T Consensus 304 --------------------------------~~~--------~~g~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~-~ 342 (365)
T cd03825 304 --------------------------------DHG--------VTGYLAKPGDPEDLAEGIEWLLADPDEREELGEAA-R 342 (365)
T ss_pred --------------------------------eCC--------CceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH-H
Confidence 111 24588999999999999999998665444444443 4
Q ss_pred hHH-HhcCHHHHHHHHHHHHhh
Q psy775 975 KRE-KVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 975 ~~v-~~~~~~~W~~~~l~~l~~ 995 (1460)
+++ ..++++.+++++++-+++
T Consensus 343 ~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 343 ELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHhcCHHHHHHHHHHHHhh
Confidence 444 567888888888776543
No 154
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.41 E-value=1.5e-12 Score=157.89 Aligned_cols=173 Identities=10% Similarity=0.107 Sum_probs=122.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCC--CCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEH--LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~--~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
.+..+++++||+.+.||+..+++|++.+.+..++. ..++.|+.+|.+. .++++++++++.+ .
T Consensus 230 ~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~---------~~~~l~~~~~~~~-------l 293 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP---------LKEKYLERIKELK-------L 293 (415)
T ss_pred CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc---------cHHHHHHHHHHcC-------C
Confidence 34578889999999999999999999987632110 1136777777542 2345555555432 2
Q ss_pred ccEEEEcCCCCHHHHHHHHHHccEEEEC---CCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccch
Q psy775 817 SPIRYIYGCISQDELASFYRDAAVALVT---PLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID 893 (1460)
Q Consensus 817 ~pvv~~~g~v~~eel~Aly~~ADv~vvt---SlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~ 893 (1460)
..++++.|.++.+++..+|++||+++.+ +..+||+++.+||||| +.|+|+|..+|..+++
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~-----G~PVI~s~~~~~~eiv------------ 356 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC-----GLPVCALDFKCIDELV------------ 356 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc-----CCCEEEeCCCCHHHHh------------
Confidence 3568888899999999999999999874 3358899999999999 7899999988866611
Q ss_pred hhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCC--HHHHHHHHH
Q psy775 894 AAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMP--EDERTLRMN 971 (1460)
Q Consensus 894 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~--~~er~~r~~ 971 (1460)
.++ ..+++++ |++++|++|..+++++ +++++...+
T Consensus 357 ---------------------------------~~~--------~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~ 393 (415)
T cd03816 357 ---------------------------------KHG--------ENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKK 393 (415)
T ss_pred ---------------------------------cCC--------CCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 111 2357774 9999999999999982 444444344
Q ss_pred HHHhHHHhcCHHHHHH
Q psy775 972 YLRKREKVHDVNYWMR 987 (1460)
Q Consensus 972 ~~~~~v~~~~~~~W~~ 987 (1460)
..+++........|.+
T Consensus 394 ~~~~~~~~~~~~~~~~ 409 (415)
T cd03816 394 GAQEESELRWDENWDR 409 (415)
T ss_pred HHHHhhhcCHHHHHHH
Confidence 4455555444445543
No 155
>PLN03017 trehalose-phosphatase
Probab=99.37 E-value=7.2e-13 Score=155.97 Aligned_cols=107 Identities=32% Similarity=0.549 Sum_probs=86.2
Q ss_pred hhcCchhhhhhcccCCCcCCCCCCCCCCCC--CCCChhhHHHHHHHhhcCCCcEEEEEecCCCCCCCCCCCCCcCCChhH
Q psy775 1345 EYLSKNELLILKGMGTLITEDGDDVLPTTM--QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEET 1422 (1460)
Q Consensus 1345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~ 1422 (1460)
.--|+.++|..++ ..+. ++....|+ +|++++.|+++++. ++.+++++||||||||+||+++|+.+.+++++
T Consensus 66 ~~~~~~~~~~~~~---~~~~--~~~~~~w~~~~psal~~~~~~~~~--~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~ 138 (366)
T PLN03017 66 RASSPTHLKSLPS---SISS--QQQLNSWIMQHPSALEMFEQIMEA--SRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKM 138 (366)
T ss_pred hccCCCccccccc---cccc--hhhhhHHHhhCChHHHHHHHHHHH--hcCCCeEEEEecCCcCcCCcCCcccccCCHHH
Confidence 3345566555444 1111 12223565 99999999999887 46789999999999999999999999999999
Q ss_pred HHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCCcccC
Q psy775 1423 KRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYA 1460 (1460)
Q Consensus 1423 ~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~~~ya 1460 (1460)
+++|++|++. ++|||+|||++.++.+++++.+++|+
T Consensus 139 ~~aL~~La~~--~~vaIvSGR~~~~l~~~~~l~~l~l~ 174 (366)
T PLN03017 139 RRTVKKLAKC--FPTAIVTGRCIDKVYNFVKLAELYYA 174 (366)
T ss_pred HHHHHHHhcC--CcEEEEeCCCHHHHHHhhcccCceEE
Confidence 9999999965 58999999999999999999877764
No 156
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.35 E-value=1.6e-11 Score=147.44 Aligned_cols=167 Identities=16% Similarity=0.206 Sum_probs=118.1
Q ss_pred CCCEEEEEEcCccccCCHHHHH----HHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRL----KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTP 814 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL----~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~ 814 (1460)
.++++|+++||+++.||+...+ .++.++.+++|++ .|+.+|.+. . .+++++ ...
T Consensus 222 ~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~----~l~ivG~g~-----~-----~~~~~l----~~~---- 279 (397)
T TIGR03087 222 PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAA----EFYIVGAKP-----S-----PAVRAL----AAL---- 279 (397)
T ss_pred CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCc----EEEEECCCC-----h-----HHHHHh----ccC----
Confidence 3567899999999999999887 5676777788875 566666432 1 122222 111
Q ss_pred CCccEEEEcCCCCHHHHHHHHHHccEEEECCC-ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccch
Q psy775 815 NWSPIRYIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID 893 (1460)
Q Consensus 815 ~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSl-rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~ 893 (1460)
+-+.+.|.++ ++..+|+.||++|+||. .||++++.+||||| +.|+|+|..++..-
T Consensus 280 ---~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~-----G~PVV~t~~~~~~i-------------- 335 (397)
T TIGR03087 280 ---PGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAM-----AKPVVASPEAAEGI-------------- 335 (397)
T ss_pred ---CCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHc-----CCCEEecCcccccc--------------
Confidence 1156778887 67899999999999996 59999999999999 78899988642110
Q ss_pred hhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q psy775 894 AAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 973 (1460)
Q Consensus 894 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~ 973 (1460)
+ +-. ..++++. .|++++|++|.+.++++...++++.++
T Consensus 336 --------------------------------~--~~~------~~g~lv~-~~~~~la~ai~~ll~~~~~~~~~~~~a- 373 (397)
T TIGR03087 336 --------------------------------D--ALP------GAELLVA-ADPADFAAAILALLANPAEREELGQAA- 373 (397)
T ss_pred --------------------------------c--ccC------CcceEeC-CCHHHHHHHHHHHHcCHHHHHHHHHHH-
Confidence 0 000 1246675 899999999999998765444444444
Q ss_pred HhHH-HhcCHHHHHHHHHHHH
Q psy775 974 RKRE-KVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 974 ~~~v-~~~~~~~W~~~~l~~l 993 (1460)
++++ ..+++...++++.+-+
T Consensus 374 r~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 374 RRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 5555 6789888888776654
No 157
>PLN02580 trehalose-phosphatase
Probab=99.35 E-value=1.2e-12 Score=155.33 Aligned_cols=97 Identities=38% Similarity=0.684 Sum_probs=85.3
Q ss_pred cccCCCChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhh
Q psy775 15 ILKGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 94 (1460)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~ 94 (1460)
...|++.+..|+++..- +.++++++||||||||+||+.+|+.+.++++++++|++|++. ..|+|+|||+.+++.++
T Consensus 98 ~~~~p~al~~~~~~~~~--~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~ 173 (384)
T PLN02580 98 MLKYPSALTSFEQIANF--AKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYEL 173 (384)
T ss_pred HHhCcHHHHHHHHHHHH--hhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHH
Confidence 45678888888776533 446889999999999999999999999999999999999998 47999999999999999
Q ss_pred hccccceeEccCCcccccCCC
Q psy775 95 VGIEGLTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 95 l~~~~~~~ig~hGaei~~~g~ 115 (1460)
+++.++.|+|+||+++..+.+
T Consensus 174 l~~~~l~laGsHG~e~~~p~~ 194 (384)
T PLN02580 174 VGLTELYYAGSHGMDIMGPVR 194 (384)
T ss_pred hCCCCccEEEeCCceeecCCC
Confidence 998889999999999876543
No 158
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.34 E-value=1e-11 Score=153.87 Aligned_cols=160 Identities=10% Similarity=0.035 Sum_probs=112.3
Q ss_pred EEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEE
Q psy775 742 KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 821 (1460)
Q Consensus 742 kiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~ 821 (1460)
+.+++||||.+.||+..+|+|+..+.++.|++ .|+.+|.+ + .++++++++.+.+.. +.
T Consensus 547 kgiLfVGRLa~EKGld~LLeAla~L~~~~pnv----rLvIVGDG-----P----~reeLe~la~eLgL~---------V~ 604 (794)
T PLN02501 547 KGAYFLGKMVWAKGYRELIDLLAKHKNELDGF----NLDVFGNG-----E----DAHEVQRAAKRLDLN---------LN 604 (794)
T ss_pred CceEEEEcccccCCHHHHHHHHHHHHhhCCCe----EEEEEcCC-----c----cHHHHHHHHHHcCCE---------EE
Confidence 44789999999999999999999988888864 56666644 3 234555555554321 34
Q ss_pred EcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhc
Q psy775 822 IYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFC 901 (1460)
Q Consensus 822 ~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~ 901 (1460)
|.|..+. ...+|+.|||||+||.+|||++|++||||| +.|||+|..+|...
T Consensus 605 FLG~~dd--~~~lyasaDVFVlPS~sEgFGlVlLEAMA~-----GlPVVATd~pG~e~---------------------- 655 (794)
T PLN02501 605 FLKGRDH--ADDSLHGYKVFINPSISDVLCTATAEALAM-----GKFVVCADHPSNEF---------------------- 655 (794)
T ss_pred ecCCCCC--HHHHHHhCCEEEECCCcccchHHHHHHHHc-----CCCEEEecCCCCce----------------------
Confidence 5555443 347899999999999999999999999999 78999999876221
Q ss_pred cccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcC
Q psy775 902 PYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHD 981 (1460)
Q Consensus 902 ~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 981 (1460)
+.++ .++++ +.|.++++++|.++|++++.. .+... ...++
T Consensus 656 -------------------------V~~g-------~nGll--~~D~EafAeAI~~LLsd~~~r--l~~~a----~~~~S 695 (794)
T PLN02501 656 -------------------------FRSF-------PNCLT--YKTSEDFVAKVKEALANEPQP--LTPEQ----RYNLS 695 (794)
T ss_pred -------------------------Eeec-------CCeEe--cCCHHHHHHHHHHHHhCchhh--hHHHH----HhhCC
Confidence 1111 12333 369999999999999987632 11111 22566
Q ss_pred HHHHHHHHHHH
Q psy775 982 VNYWMRSFLKG 992 (1460)
Q Consensus 982 ~~~W~~~~l~~ 992 (1460)
+..-++++++.
T Consensus 696 WeAaadrLle~ 706 (794)
T PLN02501 696 WEAATQRFMEY 706 (794)
T ss_pred HHHHHHHHHHh
Confidence 66666666544
No 159
>PLN02151 trehalose-phosphatase
Probab=99.32 E-value=2.9e-12 Score=150.51 Aligned_cols=95 Identities=37% Similarity=0.645 Sum_probs=84.3
Q ss_pred ccCCCChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 16 LKGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
..|++.+..+++++.. ..++++++||||||||+||+++|+.+.++++++++|++|++. ..|+|+|||+...+.+.+
T Consensus 78 ~~~p~a~~~~~~~~~~--~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~--~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 78 KEHPSALNMFEEILHK--SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC--FPTAIVSGRCREKVSSFV 153 (354)
T ss_pred HhCChHHHHHHHHHHh--hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcC--CCEEEEECCCHHHHHHHc
Confidence 4677888888877776 334689999999999999999999999999999999999965 689999999999999999
Q ss_pred ccccceeEccCCcccccCC
Q psy775 96 GIEGLTYAGNHGLEIIHPD 114 (1460)
Q Consensus 96 ~~~~~~~ig~hGaei~~~g 114 (1460)
++.++.|+|+||+++..++
T Consensus 154 ~~~~l~laGsHG~e~~~p~ 172 (354)
T PLN02151 154 KLTELYYAGSHGMDIKGPE 172 (354)
T ss_pred CCccceEEEeCCceeecCC
Confidence 9888999999999987653
No 160
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.31 E-value=1.3e-10 Score=138.86 Aligned_cols=247 Identities=13% Similarity=0.098 Sum_probs=146.4
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCc-HHHHhhhccCceeeeccHHhHHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWS-DEILQGMLGCDMVGFHIEDYCLNFVDC 289 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r-~eil~gLL~aDlIgF~t~~yar~FL~~ 289 (1460)
++.++|.+..-...+...++ ..++.+-+|=-|+..... -+.. ...-..+-.||+|-..+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~~~--------~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAALLQ--------ASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhhcC--------CCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-
Confidence 57789988665555555522 345555555333321110 0000 11122233467776666554432211
Q ss_pred HHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccc---hhhhccCCeEEEEecCccccCCHHHHHHHHHHH
Q psy775 290 CQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA---PRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETL 366 (1460)
Q Consensus 290 ~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~---~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~l 366 (1460)
+ + .++.++|+|+|.+.|.+..... ......++++++|+|++.+.+++. +|.+ +
T Consensus 171 -----------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~~~~~~~~~~~~i~y~G~l~~~~d~~-ll~~---l 226 (373)
T cd04950 171 -----------------L-N--PNVVLVPNGVDYEHFAAARDPPPPPADLAALPRPVIGYYGAIAEWLDLE-LLEA---L 226 (373)
T ss_pred -----------------C-C--CCEEEcccccCHHHhhcccccCCChhHHhcCCCCEEEEEeccccccCHH-HHHH---H
Confidence 1 2 4577899999999997543221 112225678999999999966654 4443 3
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC
Q psy775 367 LEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL 446 (1460)
Q Consensus 367 L~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl 446 (1460)
.+.+|++. ++.+|... ...+ . ..+ .. ...| .+.|.++.+++.++|+.||++++|+.
T Consensus 227 a~~~p~~~----~vliG~~~--~~~~---~----~~~----~~------~~nV-~~~G~~~~~~l~~~l~~~Dv~l~P~~ 282 (373)
T cd04950 227 AKARPDWS----FVLIGPVD--VSID---P----SAL----LR------LPNV-HYLGPKPYKELPAYLAGFDVAILPFR 282 (373)
T ss_pred HHHCCCCE----EEEECCCc--CccC---h----hHh----cc------CCCE-EEeCCCCHHHHHHHHHhCCEEecCCc
Confidence 45678763 55556331 1000 0 111 00 1234 45699999999999999999999986
Q ss_pred C-----CCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 447 R-----DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 447 r-----EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
. +++++..+||||| |.|+|.|...++.+ ..++..+.+.|+++++++|.++|..+..++..+. .+..
T Consensus 283 ~~~~~~~~~P~Kl~EylA~-----G~PVVat~~~~~~~-~~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~ 353 (373)
T cd04950 283 LNELTRATSPLKLFEYLAA-----GKPVVATPLPEVRR-YEDEVVLIADDPEEFVAAIEKALLEDGPARERRR---LRLA 353 (373)
T ss_pred cchhhhcCCcchHHHHhcc-----CCCEEecCcHHHHh-hcCcEEEeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHH
Confidence 3 4778999999999 56668777654433 3334555567999999999998765544433222 2256
Q ss_pred hhcC
Q psy775 522 KHMN 525 (1460)
Q Consensus 522 ~~~~ 525 (1460)
.+++
T Consensus 354 ~~~s 357 (373)
T cd04950 354 AQNS 357 (373)
T ss_pred HHCC
Confidence 6666
No 161
>KOG1111|consensus
Probab=99.30 E-value=9.2e-12 Score=142.55 Aligned_cols=176 Identities=20% Similarity=0.307 Sum_probs=131.3
Q ss_pred CCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEE
Q psy775 301 KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLL 380 (1460)
Q Consensus 301 ~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLv 380 (1460)
.+..++-.-..-++.++|+.++++.|.+.+...+ ..+...|+.++||-+.||++.+++.+.++.++||+.+ ++
T Consensus 158 entvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~~---S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fi 230 (426)
T KOG1111|consen 158 ENTVLRGALAPAKVSVIPNAVVTHTFTPDAADKP---SADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FI 230 (426)
T ss_pred CceEEEeccCHhHeeeccceeeccccccCccccC---CCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EE
Confidence 3444444445568999999999999988543310 1345789999999999999999999999999999864 55
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeee
Q psy775 381 QIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 460 (1460)
Q Consensus 381 qig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAc 460 (1460)
.+| |+|....+++-+++. +-+ .+++ +.|.++++++-..|...|||+-||+.|.||++.+||+.|
T Consensus 231 i~G-----DGPk~i~lee~lEk~----~l~------~rV~-~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc 294 (426)
T KOG1111|consen 231 IIG-----DGPKRIDLEEMLEKL----FLQ------DRVV-MLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC 294 (426)
T ss_pred Eec-----CCcccchHHHHHHHh----hcc------CceE-EecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC
Confidence 554 444333344333332 111 2444 459999999999999999999999999999999999999
Q ss_pred ccCCCCCeEEEcCCCCchhccccc-EEECCCCHHHHHHHHHHHcC
Q psy775 461 QINEPPGVLIVSPFAGAGEQMHEA-LICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 461 q~~~~~GvlVlSe~aGaa~~L~~a-llVNP~D~~elA~AI~~aL~ 504 (1460)
|-++|.+..+|..+.|... +..-+-+++++++++.++++
T Consensus 295 -----GL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 295 -----GLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred -----CCEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHH
Confidence 4556777777777777654 43455578888888888876
No 162
>PLN03017 trehalose-phosphatase
Probab=99.27 E-value=8.9e-12 Score=146.88 Aligned_cols=97 Identities=35% Similarity=0.640 Sum_probs=83.8
Q ss_pred cccCCCChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhh
Q psy775 15 ILKGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 94 (1460)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~ 94 (1460)
+..|++.+..|++++..+. .+++++||||||||+||+.+|+.+.++++++++|++|+ + ++.++|+|||++..+.+.
T Consensus 90 ~~~~psal~~~~~~~~~~~--~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~-~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 90 IMQHPSALEMFEQIMEASR--GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-K-CFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred HhhCChHHHHHHHHHHHhc--CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-c-CCcEEEEeCCCHHHHHHh
Confidence 3457888888877776533 47899999999999999999999999999999999999 4 689999999999999988
Q ss_pred hccccceeEccCCcccccCCC
Q psy775 95 VGIEGLTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 95 l~~~~~~~ig~hGaei~~~g~ 115 (1460)
.++..+.++|+||+++..+++
T Consensus 166 ~~l~~l~l~g~hGa~i~~p~~ 186 (366)
T PLN03017 166 VKLAELYYAGSHGMDIKGPAK 186 (366)
T ss_pred hcccCceEEEcCCcEEecCCC
Confidence 877777899999999887653
No 163
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.26 E-value=8.4e-11 Score=143.61 Aligned_cols=164 Identities=13% Similarity=0.083 Sum_probs=116.9
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
.+++++||||.+.||+..+|+||.++.+++|++ .|+.+|.+ ++. +++++++.+++- . ++
T Consensus 228 ~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~----~l~ivGdG-----p~~----~~L~~~a~~l~l-------~-~~ 286 (462)
T PLN02846 228 TKGAYYIGKMVWSKGYKELLKLLHKHQKELSGL----EVDLYGSG-----EDS----DEVKAAAEKLEL-------D-VR 286 (462)
T ss_pred ceEEEEEecCcccCCHHHHHHHHHHHHhhCCCe----EEEEECCC-----ccH----HHHHHHHHhcCC-------c-EE
Confidence 357899999999999999999999988888874 45555543 333 445555555432 1 34
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIF 900 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~ 900 (1460)
+|.|..+.+ .+|+.+||||.||.+||||+|.+||||| +.|+|++...| .+.
T Consensus 287 vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~-----G~PVVa~~~~~-~~~-------------------- 337 (462)
T PLN02846 287 VYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAM-----GKIVVCANHPS-NEF-------------------- 337 (462)
T ss_pred EECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHc-----CCcEEEecCCC-cce--------------------
Confidence 577766554 5888999999999999999999999999 78899998775 341
Q ss_pred ccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhc
Q psy775 901 CPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVH 980 (1460)
Q Consensus 901 ~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~ 980 (1460)
|.+. .+++.+ .|.++++++|.++|+.++.+... .. + ..+
T Consensus 338 -------------------------v~~~--------~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~--~a-~---~~~ 376 (462)
T PLN02846 338 -------------------------FKQF--------PNCRTY--DDGKGFVRATLKALAEEPAPLTD--AQ-R---HEL 376 (462)
T ss_pred -------------------------eecC--------CceEec--CCHHHHHHHHHHHHccCchhHHH--HH-H---HhC
Confidence 1111 234555 38999999999999865433211 11 1 367
Q ss_pred CHHHHHHHHHHHHhh
Q psy775 981 DVNYWMRSFLKGMGT 995 (1460)
Q Consensus 981 ~~~~W~~~~l~~l~~ 995 (1460)
+++.-++++++.++-
T Consensus 377 SWe~~~~~l~~~~~~ 391 (462)
T PLN02846 377 SWEAATERFLRVADL 391 (462)
T ss_pred CHHHHHHHHHHHhcc
Confidence 777777777766543
No 164
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.25 E-value=1.1e-11 Score=141.01 Aligned_cols=101 Identities=34% Similarity=0.583 Sum_probs=86.9
Q ss_pred HHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccC
Q psy775 27 EYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNH 106 (1460)
Q Consensus 27 ~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~h 106 (1460)
..+..+.. +++.++||||||||+++..+|+.+.+++.++++|++|++++...|+|+|||++.++..+++.++++++|.|
T Consensus 8 ~~~~~~~~-a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aeh 86 (266)
T COG1877 8 QLLEPYLN-ARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEH 86 (266)
T ss_pred hhcccccc-ccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEec
Confidence 44444444 56789999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CcccccCCCCccccCCCccchh
Q psy775 107 GLEIIHPDGSRFVHPIPTEFED 128 (1460)
Q Consensus 107 Gaei~~~g~~i~~~pI~ee~vd 128 (1460)
|++++..++..|...-.++...
T Consensus 87 Ga~~r~~~g~~~~~~~~~~~~~ 108 (266)
T COG1877 87 GAEVRDPNGKWWINLAEEADLR 108 (266)
T ss_pred ceEEecCCCCeeEecCHHHHhh
Confidence 9999777776666555555544
No 165
>PLN02275 transferase, transferring glycosyl groups
Probab=99.23 E-value=2.3e-11 Score=145.26 Aligned_cols=115 Identities=10% Similarity=0.132 Sum_probs=88.8
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHH-----------------hCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHH
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLE-----------------KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQ 802 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~-----------------~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~ 802 (1460)
...+++++||+.+.||+...++|+..+.. ++|+ +.|+.+|.+. + ++++++
T Consensus 212 ~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG~G~-----~----~~~l~~ 278 (371)
T PLN02275 212 RPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITGKGP-----Q----KAMYEE 278 (371)
T ss_pred CcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEeCCC-----C----HHHHHH
Confidence 34678899999999999999999988752 3454 6778777543 2 244555
Q ss_pred HHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECC---CccCCCccceeeeeeccCCCCceEEEcCCCCcch
Q psy775 803 LVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP---LRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879 (1460)
Q Consensus 803 lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtS---lrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~ 879 (1460)
.+++.+. ..++++.+.++.+++..+|+.||++|+++ ..|||+.+.+||||| +.|+|+|..+|..+
T Consensus 279 ~~~~~~l-------~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~-----G~PVVa~~~gg~~e 346 (371)
T PLN02275 279 KISRLNL-------RHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGC-----GLPVCAVSYSCIGE 346 (371)
T ss_pred HHHHcCC-------CceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHC-----CCCEEEecCCChHH
Confidence 5554332 24677777899999999999999999853 348999999999999 78999999888666
No 166
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.21 E-value=1.1e-09 Score=132.82 Aligned_cols=182 Identities=15% Similarity=0.078 Sum_probs=115.1
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhcc---CCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGR---FTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~---~~~~~ 815 (1460)
.++++++++++. .|+...+++||.++.+++|++ .|+.+|. +++. .+++++++++.+-. +.. +
T Consensus 231 ~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~----~liivG~-----g~~r---~~~l~~~~~~~gl~~~~~~~-~ 295 (425)
T PRK05749 231 PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNL----LLILVPR-----HPER---FKEVEELLKKAGLSYVRRSQ-G 295 (425)
T ss_pred CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCc----EEEEcCC-----Chhh---HHHHHHHHHhCCCcEEEccC-C
Confidence 356788888874 588999999999999889975 4554442 2222 13455554443322 110 0
Q ss_pred Cc----cEEEEcCCCCHHHHHHHHHHccEEEE-CCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcc
Q psy775 816 WS----PIRYIYGCISQDELASFYRDAAVALV-TPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY 890 (1460)
Q Consensus 816 ~~----pvv~~~g~v~~eel~Aly~~ADv~vv-tSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~ 890 (1460)
.. ..+++.+ +..|+..+|+.||++++ +|..||+|++++||||| +.|+|++...|...
T Consensus 296 ~~~~~~~~v~l~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~-----G~PVI~g~~~~~~~----------- 357 (425)
T PRK05749 296 EPPSADTDVLLGD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAF-----GVPVISGPHTFNFK----------- 357 (425)
T ss_pred CCCCCCCcEEEEe--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHh-----CCCEEECCCccCHH-----------
Confidence 00 1233332 46799999999999766 67889999999999999 78889887654322
Q ss_pred cchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHH
Q psy775 891 EIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRM 970 (1460)
Q Consensus 891 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~ 970 (1460)
++++.+ ..++.++.|.|++++|++|.+.++.+...+++..
T Consensus 358 ---e~~~~~-------------------------------------~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~ 397 (425)
T PRK05749 358 ---EIFERL-------------------------------------LQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGE 397 (425)
T ss_pred ---HHHHHH-------------------------------------HHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 011100 0223567789999999999999986554444443
Q ss_pred HHHHhHHHhcCHHHHHHHHHHHHhhh
Q psy775 971 NYLRKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 971 ~~~~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
..++++.++. .=.+..++.+...
T Consensus 398 -~a~~~~~~~~--~~~~~~~~~l~~~ 420 (425)
T PRK05749 398 -AGVAFLKQNQ--GALQRTLQLLEPY 420 (425)
T ss_pred -HHHHHHHhCc--cHHHHHHHHHHHh
Confidence 4466666552 3334444444443
No 167
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.20 E-value=6.4e-10 Score=124.00 Aligned_cols=171 Identities=25% Similarity=0.368 Sum_probs=125.8
Q ss_pred EEEEeecccCchhhhhhhccchhhhccC-CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChH
Q psy775 313 RIRPLPIAIPYERFVQLAQAAPRVIDTK-QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVK 391 (1460)
Q Consensus 313 kV~viPiGID~~~f~~~~~~~~~~~~~~-~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ 391 (1460)
++.++|.|++.+.+.... ....... ..+++++||+.+.||+...++|+..+.+..++ +.++.+|.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~~g~~~~~--- 242 (381)
T COG0438 173 KIVVIPNGIDTEKFAPAR---IGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIVGDGPER--- 242 (381)
T ss_pred CceEecCCcCHHHcCccc---cCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEEEcCCCcc---
Confidence 667889999998876420 0111112 36899999999999999999999999887765 345555533221
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEE
Q psy775 392 EYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIV 471 (1460)
Q Consensus 392 ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVl 471 (1460)
...+.. ++.+.+. .+.+.+.|.++.+++..+|+.||+++.||..||||++++|||+| |.|+|+
T Consensus 243 -~~~~~~----~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~-----g~pvi~ 305 (381)
T COG0438 243 -REELEK----LAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA-----GTPVIA 305 (381)
T ss_pred -HHHHHH----HHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc-----CCcEEE
Confidence 112222 3333322 12344478899889999999999999999999999999999999 567799
Q ss_pred cCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHH
Q psy775 472 SPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDER 510 (1460)
Q Consensus 472 Se~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er 510 (1460)
|...|..+.+.+ |.++++.|.+++++++..++++....+
T Consensus 306 ~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 347 (381)
T COG0438 306 SDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELRE 347 (381)
T ss_pred CCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCHHHHH
Confidence 999888877754 778888889999999999999873333
No 168
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.17 E-value=3.4e-09 Score=127.23 Aligned_cols=187 Identities=12% Similarity=0.076 Sum_probs=116.3
Q ss_pred cCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc-----cCCeEEE
Q psy775 271 GCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID-----TKQKIVL 345 (1460)
Q Consensus 271 ~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~-----~~~kvIL 345 (1460)
.+|.+-.-+......+.+ .| -...+|.+++++|+++.+.+.. .....++ .++++|+
T Consensus 150 ~~d~~~~~s~~~~~~l~~-----~g-------------~~~~ki~v~g~~v~~~f~~~~~-~~~~~r~~~gl~~~~~~il 210 (382)
T PLN02605 150 GVTRCFCPSEEVAKRALK-----RG-------------LEPSQIRVYGLPIRPSFARAVR-PKDELRRELGMDEDLPAVL 210 (382)
T ss_pred CCCEEEECCHHHHHHHHH-----cC-------------CCHHHEEEECcccCHhhccCCC-CHHHHHHHcCCCCCCcEEE
Confidence 478887766554444332 12 1223556678888876543221 1112221 5678999
Q ss_pred EecCccccCCHHHHHHHHHHHHHh----CCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q psy775 346 GVDRLDYTKGLVHRLKAFETLLEK----HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 421 (1460)
Q Consensus 346 ~VgRLd~~KGI~~lL~Af~~lL~~----~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~ 421 (1460)
++||....||+..+++++..++.+ .|+. .++.++. +.+ .+++++++... + ..| .
T Consensus 211 ~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~----~~~vi~G----~~~---~~~~~L~~~~~--~--------~~v-~ 268 (382)
T PLN02605 211 LMGGGEGMGPLEETARALGDSLYDKNLGKPIG----QVVVICG----RNK---KLQSKLESRDW--K--------IPV-K 268 (382)
T ss_pred EECCCcccccHHHHHHHHHHhhccccccCCCc----eEEEEEC----CCH---HHHHHHHhhcc--c--------CCe-E
Confidence 999999999999999999876522 2332 2333331 112 22333332210 1 123 3
Q ss_pred EcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC-----CCchhcc-cccEEECCCCHHHH
Q psy775 422 IYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF-----AGAGEQM-HEALICNPYEIDAA 495 (1460)
Q Consensus 422 ~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~-----aGaa~~L-~~allVNP~D~~el 495 (1460)
+.|+++ ++..+|++||++|.+| .++++.||||| +.|+|++.. .|.++.+ .++.-+.+.|++++
T Consensus 269 ~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EAma~-----g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~l 337 (382)
T PLN02605 269 VRGFVT--NMEEWMGACDCIITKA----GPGTIAEALIR-----GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEI 337 (382)
T ss_pred EEeccc--cHHHHHHhCCEEEECC----CcchHHHHHHc-----CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHH
Confidence 558774 7999999999999866 37899999999 667788875 2333434 23333446899999
Q ss_pred HHHHHHHcCCCHHH
Q psy775 496 AEVIHRALTMPEDE 509 (1460)
Q Consensus 496 A~AI~~aL~m~~~e 509 (1460)
+++|.++|.+++++
T Consensus 338 a~~i~~ll~~~~~~ 351 (382)
T PLN02605 338 ARIVAEWFGDKSDE 351 (382)
T ss_pred HHHHHHHHcCCHHH
Confidence 99999999974333
No 169
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.17 E-value=2e-11 Score=137.24 Aligned_cols=85 Identities=42% Similarity=0.686 Sum_probs=59.2
Q ss_pred EEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccCCcccccCCCCccccC
Q psy775 42 LLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVHP 121 (1460)
Q Consensus 42 FfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~hGaei~~~g~~i~~~p 121 (1460)
||||||||+|+.++|+.+.++++++++|++|++.++..|+|+|||+.+++..+..+.+++++|+||+++..+++..+...
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~ 80 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNL 80 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-T
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccccccc
Confidence 89999999999999999999999999999999998888999999999997778788999999999999999988655443
Q ss_pred CCccc
Q psy775 122 IPTEF 126 (1460)
Q Consensus 122 I~ee~ 126 (1460)
.....
T Consensus 81 ~~~~~ 85 (235)
T PF02358_consen 81 PADED 85 (235)
T ss_dssp TGGGG
T ss_pred ccccc
Confidence 33433
No 170
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.16 E-value=7.5e-11 Score=135.23 Aligned_cols=93 Identities=32% Similarity=0.516 Sum_probs=78.4
Q ss_pred cEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccCCcccccCCCCc
Q psy775 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSR 117 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~hGaei~~~g~~i 117 (1460)
++++||||||||++++++|+.+.+++.++++|++|++++|+.++|+|||++..+.+.+...++.++|+||+++...++..
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 93 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKT 93 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCe
Confidence 68999999999999999999999999999999999985599999999999999988886555678999999998665544
Q ss_pred cccCCCccchhhh
Q psy775 118 FVHPIPTEFEDKV 130 (1460)
Q Consensus 118 ~~~pI~ee~vdeL 130 (1460)
+...++.+....+
T Consensus 94 ~~~~l~~~~~~~i 106 (266)
T PRK10187 94 HIVHLPDAIARDI 106 (266)
T ss_pred eeccCChhHHHHH
Confidence 4566766554443
No 171
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.16 E-value=2.4e-09 Score=131.30 Aligned_cols=323 Identities=16% Similarity=0.166 Sum_probs=193.2
Q ss_pred CCceeeccccccccHHHHHHHHhhcCcCceEEEEeeC-----CCC-CccccccCcc-H------------HHHHhhcccC
Q psy775 567 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHI-----PFP-PWDIFRLFPW-S------------DEILQGMLGC 627 (1460)
Q Consensus 567 ~diIwIhDYhL~LlP~~Lr~~~~~~~~~~kigfFLHi-----PfP-~~e~fr~lP~-r------------~eIL~~LL~a 627 (1460)
+|+|-+||||.-|+|.++++.. ......+-.|..|. .|+ .......+|. . .-+=-++..|
T Consensus 131 pDIvH~hDWqt~L~~~~lk~~~-~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~a 209 (487)
T COG0297 131 PDIVHAHDWQTGLLPAYLKQRY-RSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYA 209 (487)
T ss_pred CCEEEeecHHHHHHHHHHhhcc-cccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheec
Confidence 4899999999999999998432 22567788999995 233 1111122332 1 1222345556
Q ss_pred ceeecccHhHHHHHHHHHHHHhCceeeCC-CcEEEECCeEEEEEEeeCCCChhHHhHHHhcCccccccchhhhccccccc
Q psy775 628 DMVGFHIEDYCLNFVDCCQRRLGCRVDRK-NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLD 706 (1460)
Q Consensus 628 DlIGFqt~~yar~FL~~c~rlLg~~~~~~-~~~i~~~Gr~v~V~v~PiGID~~~f~~~~~~~~~~~~~~~~~~~g~~~~~ 706 (1460)
|.|.--.+.|++--.. . .+..+ ...+.+ +.-++.-+=+|||.+...+.....-. .. ....+
T Consensus 210 d~vttVSptYa~Ei~t---~----~~g~gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~-~~--------y~~~~ 271 (487)
T COG0297 210 DAVTTVSPTYAGEIYT---P----EYGEGLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIA-AN--------YSAEV 271 (487)
T ss_pred cEEEEECHHHHHhhcc---c----cccccchhhhhh--ccccEEEEEeeEEecccCcccccchh-cc--------CCccc
Confidence 6666666666544331 0 01000 001111 22456667789987766442211000 00 00001
Q ss_pred cch--hhHHHHHhhhcCchhHHHHHHhhCCcCCCCCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEc
Q psy775 707 YTK--GLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAV 784 (1460)
Q Consensus 707 ~~~--~~~~~lr~~~~i~~~r~~~l~~~~~~~~~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~ 784 (1460)
+.+ +-...++++++++ ...+..++..|+||...||++.+++|.+.++++. ..+|.+|.
T Consensus 272 ~~~k~~nk~~L~~~~gL~--------------~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~------~~~vilG~ 331 (487)
T COG0297 272 LPAKAENKVALQERLGLD--------------VDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG------WQLVLLGT 331 (487)
T ss_pred hhhhHHHHHHHHHHhCCC--------------CCCCCcEEEEeeccccccchhHHHHHHHHHHHhC------ceEEEEec
Confidence 110 0012233333322 2245689999999999999999999999999987 24555565
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCC
Q psy775 785 PSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINE 864 (1460)
Q Consensus 785 psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~ 864 (1460)
+. ..+...+..++.++.+++ .+.-..+..---.+|..||++++||..|++||+-+++|.=
T Consensus 332 gd-------~~le~~~~~la~~~~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry---- 391 (487)
T COG0297 332 GD-------PELEEALRALASRHPGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY---- 391 (487)
T ss_pred Cc-------HHHHHHHHHHHHhcCceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc----
Confidence 41 157788888888887752 2333445555556799999999999999999999999987
Q ss_pred CCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeC
Q psy775 865 PPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICN 944 (1460)
Q Consensus 865 ~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVn 944 (1460)
+++.|+++.+|.++... -.|||. + .| -..++++.
T Consensus 392 -GtvpIv~~tGGLadTV~---~~~~~~----~----------------------------------~~----~gtGf~f~ 425 (487)
T COG0297 392 -GTLPIVRETGGLADTVV---DRNEWL----I----------------------------------QG----VGTGFLFL 425 (487)
T ss_pred -CCcceEcccCCccceec---Cccchh----c----------------------------------cC----ceeEEEEe
Confidence 77999999999998321 122221 0 01 02357777
Q ss_pred CCCHHHHHHHHHHHhCCCHH----HHHHHHHHHHhHHHhcCHHHHHHHHHHHHhhhh
Q psy775 945 PYEIDAAAEVIHRALTMPED----ERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLI 997 (1460)
Q Consensus 945 P~d~~~iA~ai~~aL~m~~~----er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 997 (1460)
|.|.++++.||.+|+..-.. .+..+.++|. ...+++.=+++..+-.+...
T Consensus 426 ~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~~ 479 (487)
T COG0297 426 QTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPLL 479 (487)
T ss_pred cCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHHh
Confidence 77999999999999986332 3333333333 23444444555554444433
No 172
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.15 E-value=6.4e-11 Score=133.96 Aligned_cols=81 Identities=42% Similarity=0.589 Sum_probs=73.0
Q ss_pred CCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccCCcccccCCC
Q psy775 36 TNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~hGaei~~~g~ 115 (1460)
+++.++||||||||+++..+|+.+.++++++++|++|.++++..|+|+|||++.++...+.+..++++|+||+++..+|+
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~hG~~~~~~g~ 80 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEHGCEMKDNGS 80 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeecCEEEecCCC
Confidence 35789999999999999999999999999999999999998889999999999888877777788899999999887554
Q ss_pred C
Q psy775 116 S 116 (1460)
Q Consensus 116 ~ 116 (1460)
.
T Consensus 81 ~ 81 (244)
T TIGR00685 81 C 81 (244)
T ss_pred c
Confidence 4
No 173
>KOG0853|consensus
Probab=99.13 E-value=2.6e-09 Score=129.56 Aligned_cols=231 Identities=14% Similarity=0.093 Sum_probs=156.0
Q ss_pred hhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhc-------cchhhhc-
Q psy775 267 QGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQ-------AAPRVID- 338 (1460)
Q Consensus 267 ~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~-------~~~~~~~- 338 (1460)
+....+|.+--+++..++.|-..-..+ . .. .+.+...+||.+.+..... ...+..+
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~~~~L---~-----------~~--d~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~ 268 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKATFVSL---S-----------NS--DITSTYPEIDGSWFTYGQYESHLELRLPVRLYRG 268 (495)
T ss_pred hhhhccceEecchhhhhhhhhhhhhhc---C-----------CC--Ccceeeccccchhccccccccchhcccccceeee
Confidence 444567877555655555555432221 0 00 1445556677655542110 1111111
Q ss_pred --cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCC-CcEEEEEEEcC-CCCChHHHHHHHHHHHHHHHHHhcccCCC
Q psy775 339 --TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHL-EKVTLLQIAVP-SRTDVKEYQDLKEEMDQLVGRINGRFTTP 414 (1460)
Q Consensus 339 --~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~-~kvvLvqig~p-sr~~~~ey~~L~~ev~~lv~~IN~~fg~~ 414 (1460)
....++.++-|+.|-||+...|.||.++...-|+.. ....++..+.+ +.+...+..++-+++..++.+.+..
T Consensus 269 v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~---- 344 (495)
T KOG0853|consen 269 VSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL---- 344 (495)
T ss_pred ecccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc----
Confidence 336788999999999999999999999988775411 12334444422 3233344445555666666654321
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCC
Q psy775 415 NWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYE 491 (1460)
Q Consensus 415 ~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D 491 (1460)
...++|..+.++.+-+.+++.+.+.++++..|-||+|++||||| +-|+|++..+|-++.+. .|++++| +
T Consensus 345 --g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~-----glPvvAt~~GGP~EiV~~~~tG~l~dp-~ 416 (495)
T KOG0853|consen 345 --GQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC-----GLPVVATNNGGPAEIVVHGVTGLLIDP-G 416 (495)
T ss_pred --CceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc-----CCCEEEecCCCceEEEEcCCcceeeCC-c
Confidence 23577778888888889999999999999999999999999999 56679999999998884 3999999 7
Q ss_pred HH---HHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 492 ID---AAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 492 ~~---elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.+ .+|++|.++.++|....+.+.+++.+..+.++
T Consensus 417 ~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs 453 (495)
T KOG0853|consen 417 QEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFS 453 (495)
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Confidence 76 69999999999988877777666655555466
No 174
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.12 E-value=8.1e-11 Score=133.89 Aligned_cols=69 Identities=39% Similarity=0.637 Sum_probs=65.2
Q ss_pred CCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCCcccC
Q psy775 1392 TTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYA 1460 (1460)
Q Consensus 1392 ~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~~~ya 1460 (1460)
.+++.++||||||||+||+++|+++.++++++.+|++|++.+++.|||+|||+..++.++++++++.++
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~ 83 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLI 83 (266)
T ss_pred cccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEE
Confidence 467889999999999999999999999999999999999999888999999999999999999998764
No 175
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.08 E-value=1.1e-10 Score=131.94 Aligned_cols=66 Identities=44% Similarity=0.592 Sum_probs=62.1
Q ss_pred CcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCCccc
Q psy775 1394 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTY 1459 (1460)
Q Consensus 1394 ~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~~~y 1459 (1460)
++.+|+|||||||+|++++|+.+.++++++++|++|++.+++.|+|||||++.++.++++++++.+
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l 67 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGL 67 (244)
T ss_pred CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeE
Confidence 467899999999999999999999999999999999999999999999999999999998888755
No 176
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.08 E-value=5.3e-11 Score=133.76 Aligned_cols=62 Identities=44% Similarity=0.721 Sum_probs=44.1
Q ss_pred EEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCCcccC
Q psy775 1399 LLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYA 1460 (1460)
Q Consensus 1399 ~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~~~ya 1460 (1460)
||||||||+||+++|+.+.++++++++|++|++.+++.|||||||++++++.+.+++++.||
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~ 62 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLA 62 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEE
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEE
Confidence 79999999999999999999999999999999999888999999999999999999999874
No 177
>KOG1111|consensus
Probab=99.03 E-value=8.2e-10 Score=126.88 Aligned_cols=118 Identities=20% Similarity=0.312 Sum_probs=93.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+...|+.++||-+.||+++++.+..++-++||+. .++.+|.+ |....+++.++ +.+-. .
T Consensus 193 ~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~v----rfii~GDG-----Pk~i~lee~lE----k~~l~-------~ 252 (426)
T KOG1111|consen 193 ADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEV----RFIIIGDG-----PKRIDLEEMLE----KLFLQ-------D 252 (426)
T ss_pred CCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCe----eEEEecCC-----cccchHHHHHH----Hhhcc-------C
Confidence 34478999999999999999999999999999984 56666644 32222333333 22221 2
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhh
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM 881 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L 881 (1460)
.+.+.|.++++++-..|...|+|+-||+.|.||++..||+.| |-++|.+..+|..++|
T Consensus 253 rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc-----GL~VVsTrVGGIpeVL 310 (426)
T KOG1111|consen 253 RVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC-----GLPVVSTRVGGIPEVL 310 (426)
T ss_pred ceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC-----CCEEEEeecCCccccC
Confidence 366789999999999999999999999999999999999999 6788888899988855
No 178
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.98 E-value=1.8e-08 Score=108.32 Aligned_cols=111 Identities=27% Similarity=0.363 Sum_probs=79.9
Q ss_pred EecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC
Q psy775 346 GVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC 425 (1460)
Q Consensus 346 ~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~ 425 (1460)
++||+.+.||+..+++|+..+.+++|++ .++.+|... +... .+..+.. . + ....|.++ +.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~----~~~i~G~~~--~~~~---~~~~~~~-------~-~--~~~~v~~~-~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDL----KLVIAGDGP--EREY---LEELLAA-------L-L--LLDRVIFL-GG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCe----EEEEEeCCC--ChHH---HHHHHHh-------c-C--CcccEEEe-CC
Confidence 9999999999999999999998888764 566666432 1111 1111111 0 0 11234544 66
Q ss_pred C-CHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc
Q psy775 426 I-SQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM 481 (1460)
Q Consensus 426 v-~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L 481 (1460)
+ +.+++..+++.||++++||..||++...+|||+| +.|+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~-----g~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC-----GLPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC-----CCCEEEcCCCCcceEE
Confidence 6 5566666677799999999999999999999999 6778999998877654
No 179
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.96 E-value=5.9e-09 Score=124.73 Aligned_cols=164 Identities=15% Similarity=0.152 Sum_probs=109.2
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.++++|+|+|++.+.+++. .|. .+.+.+|++ .|+.+|... .. . +. .+ +.. .+
T Consensus 203 ~~~~~i~y~G~l~~~~d~~-ll~---~la~~~p~~----~~vliG~~~-~~-~---~~-~~-------~~~-------~~ 254 (373)
T cd04950 203 LPRPVIGYYGAIAEWLDLE-LLE---ALAKARPDW----SFVLIGPVD-VS-I---DP-SA-------LLR-------LP 254 (373)
T ss_pred CCCCEEEEEeccccccCHH-HHH---HHHHHCCCC----EEEEECCCc-Cc-c---Ch-hH-------hcc-------CC
Confidence 4577899999999965543 333 445578876 466666441 10 0 00 11 111 12
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCC-----ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccch
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPL-----RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID 893 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSl-----rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~ 893 (1460)
-+.+.|.++++++.++|+.||++++|+. ++++++..+||||| |.|+|.|..+++.+
T Consensus 255 nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~-----G~PVVat~~~~~~~-------------- 315 (373)
T cd04950 255 NVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAA-----GKPVVATPLPEVRR-------------- 315 (373)
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhcc-----CCCEEecCcHHHHh--------------
Confidence 3667899999999999999999999985 35678999999999 67888776443211
Q ss_pred hhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHH
Q psy775 894 AAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYL 973 (1460)
Q Consensus 894 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~ 973 (1460)
+. .+ ..+.+.|+++++++|.++|..+..++..+.
T Consensus 316 ------------------------------------~~------~~-~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~--- 349 (373)
T cd04950 316 ------------------------------------YE------DE-VVLIADDPEEFVAAIEKALLEDGPARERRR--- 349 (373)
T ss_pred ------------------------------------hc------Cc-EEEeCCCHHHHHHHHHHHHhcCCchHHHHH---
Confidence 00 12 333456999999999998876544433322
Q ss_pred HhHHHhcCHHHHHHHHHHHHhh
Q psy775 974 RKREKVHDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 974 ~~~v~~~~~~~W~~~~l~~l~~ 995 (1460)
.+.+.+||++.-+++++..|..
T Consensus 350 ~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 350 LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHCCHHHHHHHHHHHHHh
Confidence 2267889988888888766543
No 180
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.91 E-value=5.2e-08 Score=108.76 Aligned_cols=178 Identities=23% Similarity=0.307 Sum_probs=124.8
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
..+++++||+.+.||+...++|+..+.++.|+ +.++.+|..... ...+..++.+.+. .+.+
T Consensus 199 ~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~~g~~~~~--------~~~~~~~~~~~~~-------~~~v 259 (381)
T COG0438 199 KFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIVGDGPER--------REELEKLAKKLGL-------EDNV 259 (381)
T ss_pred ceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEEEcCCCcc--------HHHHHHHHHHhCC-------CCcE
Confidence 37899999999999999999999999887776 455555544322 1223334444333 2335
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIF 900 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~ 900 (1460)
.+.|.++.+++..+|+.||+++.||..||+|++.+|+++| +.|+|+|...|..+.+. .
T Consensus 260 ~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~-----g~pvi~~~~~~~~e~~~------~----------- 317 (381)
T COG0438 260 KFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA-----GTPVIASDVGGIPEVVE------D----------- 317 (381)
T ss_pred EEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc-----CCcEEECCCCChHHHhc------C-----------
Confidence 5588888889999999999999999999999999999998 67889999887666211 0
Q ss_pred ccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhc
Q psy775 901 CPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVH 980 (1460)
Q Consensus 901 ~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~ 980 (1460)
...++++++.|.+++++++..++++....+....+........+
T Consensus 318 ------------------------------------~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (381)
T COG0438 318 ------------------------------------GETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEEF 361 (381)
T ss_pred ------------------------------------CCceEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhc
Confidence 00145777779999999999999987333333322223333566
Q ss_pred CHHHHHHHHHHHHhh
Q psy775 981 DVNYWMRSFLKGMGT 995 (1460)
Q Consensus 981 ~~~~W~~~~l~~l~~ 995 (1460)
++..-.+.+.+-+..
T Consensus 362 ~~~~~~~~~~~~~~~ 376 (381)
T COG0438 362 SWERIAEQLLELYEE 376 (381)
T ss_pred CHHHHHHHHHHHHHH
Confidence 666666555554443
No 181
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.90 E-value=1.9e-09 Score=119.39 Aligned_cols=99 Identities=19% Similarity=0.260 Sum_probs=77.3
Q ss_pred EEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCccc-ccCCCCc
Q psy775 41 LLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEI-IHPDGSR 117 (1460)
Q Consensus 41 lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei-~~~g~~i 117 (1460)
||+|+||||++ +...+++.+++||++|+++ |+.++++|||++..+...+..-+ ..++++||+.+ ...++.+
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l 74 (254)
T PF08282_consen 1 IFSDLDGTLLN-----SDGKISPETIEALKELQEK-GIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKIL 74 (254)
T ss_dssp EEEECCTTTCS-----TTSSSCHHHHHHHHHHHHT-TCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEE
T ss_pred cEEEECCceec-----CCCeeCHHHHHHHHhhccc-ceEEEEEccCcccccccccccccchhhhcccccceeeecccccc
Confidence 69999999987 3445999999999999999 99999999999988887775322 36789999999 6666778
Q ss_pred cccCCCccchhhhhhHHHhhccCceeeecC
Q psy775 118 FVHPIPTEFEDKVSDLLKTLQEKVMSVHID 147 (1460)
Q Consensus 118 ~~~pI~ee~vdeL~ii~~L~q~~~~pVfLd 147 (1460)
+..+++.+.+..+ +..+..+++...+.+
T Consensus 75 ~~~~i~~~~~~~i--~~~~~~~~~~~~~~~ 102 (254)
T PF08282_consen 75 YEKPIDSDDVKKI--LKYLKEHNISFFFYT 102 (254)
T ss_dssp EEESB-HHHHHHH--HHHHHHTTCEEEEEE
T ss_pred hhhheeccchhhe--eehhhhccccccccc
Confidence 8899998876666 445555554444444
No 182
>KOG0853|consensus
Probab=98.89 E-value=5.4e-08 Score=118.34 Aligned_cols=193 Identities=16% Similarity=0.207 Sum_probs=145.4
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCC-CCEEEEEEEc-CCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHL-EKVTLLQIAV-PSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~-~kVvLvqi~~-psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
....++.++-|+.|-||+...|.||.++...-|+-. ....++..+. ++.+...+..++..++.+++++.+..
T Consensus 271 ~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~------ 344 (495)
T KOG0853|consen 271 GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL------ 344 (495)
T ss_pred ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc------
Confidence 346889999999999999999999999988775411 1233333332 23344455556777788888765332
Q ss_pred ccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhh
Q psy775 817 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 896 (1460)
Q Consensus 817 ~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~ 896 (1460)
+..++|....++.+.+.++..+.+.+++|..|-||+|++||||| +-|+|++..+|-.+
T Consensus 345 g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~-----glPvvAt~~GGP~E----------------- 402 (495)
T KOG0853|consen 345 GQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC-----GLPVVATNNGGPAE----------------- 402 (495)
T ss_pred CceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc-----CCCEEEecCCCceE-----------------
Confidence 23577877888888899999999999999999999999999999 78999999999888
Q ss_pred hhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHH---HHHHHHHHHhCCCHHHHHHHHHHH
Q psy775 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEID---AAAEVIHRALTMPEDERTLRMNYL 973 (1460)
Q Consensus 897 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~---~iA~ai~~aL~m~~~er~~r~~~~ 973 (1460)
+|.+..+| ++++| +.+ .+|++|.+..+.+....+.+.+++
T Consensus 403 ----------------------------iV~~~~tG--------~l~dp-~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~ 445 (495)
T KOG0853|consen 403 ----------------------------IVVHGVTG--------LLIDP-GQEAVAELADALLKLRRDPELWARMGKNGL 445 (495)
T ss_pred ----------------------------EEEcCCcc--------eeeCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45555555 89999 777 599999999999888777777775
Q ss_pred HhHHHhcCHHHHHHHHHHHHhhh
Q psy775 974 RKREKVHDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 974 ~~~v~~~~~~~W~~~~l~~l~~~ 996 (1460)
.+.-+.+++....+++..-+..+
T Consensus 446 ~rV~e~fs~~~~~~ri~~~~~~~ 468 (495)
T KOG0853|consen 446 KRVKEMFSWQHYSERIASVLGKY 468 (495)
T ss_pred HHHHHHHhHHHHHHHHHHHhHhc
Confidence 55544477655555555555543
No 183
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.88 E-value=1.3e-07 Score=111.75 Aligned_cols=239 Identities=12% Similarity=0.038 Sum_probs=134.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEec--CCCCccccccCCCc--HHHHhhhccCceeeeccHHhHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHI--PFPPWDIFRLFPWS--DEILQGMLGCDMVGFHIEDYCLNF 286 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHi--PFPs~eifr~LP~r--~eil~gLL~aDlIgF~t~~yar~F 286 (1460)
..|+|++|++....++..+..+.- +.++....|- +|- +..|+. ...+.. .+|++-.-+....+++
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~----~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~~--~ad~~~~~s~~~~~~l 156 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKL----GIPVAHVEAGLRSFD-----RGMPDEENRHAIDK--LSDLHFAPTEEARRNL 156 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHc----CCCEEEEecccccCC-----CCCCchHHHHHHHH--HhhhccCCCHHHHHHH
Confidence 369999998876666655544321 4666654431 120 011211 111111 2454444444333333
Q ss_pred HHHHHhhcCceecCCCcEEEECCeEEEEEEeeccc-Cchhhhhhhccchhhh-c----cCCeEEEEecCccc---cCCHH
Q psy775 287 VDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAI-PYERFVQLAQAAPRVI-D----TKQKIVLGVDRLDY---TKGLV 357 (1460)
Q Consensus 287 L~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGI-D~~~f~~~~~~~~~~~-~----~~~kvIL~VgRLd~---~KGI~ 357 (1460)
.+ .+...-+|.++++++ |...+..........+ + .++.+++.++|+.. .||+.
T Consensus 157 ~~------------------~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~ 218 (363)
T cd03786 157 LQ------------------EGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPKKYILVTLHRVENVDDGEQLE 218 (363)
T ss_pred HH------------------cCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCCCEEEEEeCCccccCChHHHH
Confidence 32 122344677788774 5444332211111111 1 33457778999875 79999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHh
Q psy775 358 HRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 437 (1460)
Q Consensus 358 ~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~a 437 (1460)
.+++|++++.++ + +.++..+. .+....+++. +.+.+.. -..+ .+.+....+++..+|++
T Consensus 219 ~l~~al~~l~~~--~----~~vi~~~~-----~~~~~~l~~~----~~~~~~~-----~~~v-~~~~~~~~~~~~~l~~~ 277 (363)
T cd03786 219 EILEALAELAEE--D----VPVVFPNH-----PRTRPRIREA----GLEFLGH-----HPNV-LLISPLGYLYFLLLLKN 277 (363)
T ss_pred HHHHHHHHHHhc--C----CEEEEECC-----CChHHHHHHH----HHhhccC-----CCCE-EEECCcCHHHHHHHHHc
Confidence 999999988543 2 33433221 1222233333 3332210 0123 44577788999999999
Q ss_pred ccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc-cccEEECC-CCHHHHHHHHHHHcCCCHHH
Q psy775 438 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM-HEALICNP-YEIDAAAEVIHRALTMPEDE 509 (1460)
Q Consensus 438 ADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L-~~allVNP-~D~~elA~AI~~aL~m~~~e 509 (1460)
||++|.+|- | +..|||+| +.|+|++...+...++ ..|..+.+ .|+++++++|.++++++...
T Consensus 278 ad~~v~~Sg----g-i~~Ea~~~-----g~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~~~ 341 (363)
T cd03786 278 ADLVLTDSG----G-IQEEASFL-----GVPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEFAY 341 (363)
T ss_pred CcEEEEcCc----c-HHhhhhhc-----CCCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCchhh
Confidence 999999994 4 46999999 4556777655544444 34444433 37999999999999876444
No 184
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.87 E-value=3e-09 Score=121.21 Aligned_cols=84 Identities=18% Similarity=0.264 Sum_probs=68.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCccccc--CC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIH--PD 114 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~--~g 114 (1460)
++|+|+||||++- ...+++.+++||++++++ |+.+++||||++..+...+ ++.. .++|+||+.+.. .+
T Consensus 5 li~~DlDGTLl~~-----~~~i~~~~~~ai~~~~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~-~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 5 VIALDLDGTLLTP-----KKTILPESLEALARAREA-GYKVIIVTGRHHVAIHPFYQALALDT-PAICCNGTYLYDYQAK 77 (272)
T ss_pred EEEEeCCCceECC-----CCccCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHhcCCCC-CEEEcCCcEEEecCCC
Confidence 7899999999962 345899999999999999 9999999999988776554 3322 478999999985 45
Q ss_pred CCccccCCCccchhhh
Q psy775 115 GSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 115 ~~i~~~pI~ee~vdeL 130 (1460)
+.++..+++.+.+..+
T Consensus 78 ~~l~~~~l~~~~~~~i 93 (272)
T PRK10530 78 KVLEADPLPVQQALQV 93 (272)
T ss_pred EEEEecCCCHHHHHHH
Confidence 5678889999877766
No 185
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.87 E-value=8.3e-08 Score=112.61 Aligned_cols=166 Identities=14% Similarity=0.189 Sum_probs=104.5
Q ss_pred EEEEEeecccCchhhhhhhccchhhh-ccCCeEEEEecCccccCCHHHHH-HHHHHHHHhCCCCCCcEEEEEEEcCCCCC
Q psy775 312 VRIRPLPIAIPYERFVQLAQAAPRVI-DTKQKIVLGVDRLDYTKGLVHRL-KAFETLLEKHPEHLEKVTLLQIAVPSRTD 389 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~~~~~~-~~~~kvIL~VgRLd~~KGI~~lL-~Af~~lL~~~P~~~~kvvLvqig~psr~~ 389 (1460)
.++.++|+|+|.+.+..... ..... ..++++++.+++....||...++ +|++.+.+ ++ +.++.++.+
T Consensus 152 ~~~~~i~n~v~~~~~~~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~----~~~~~i~G~---- 220 (350)
T cd03785 152 DKAVVTGNPVREEILALDRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLR--KR----LQVIHQTGK---- 220 (350)
T ss_pred CcEEEECCCCchHHhhhhhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cC----eEEEEEcCC----
Confidence 46778899999887754321 01111 15677888898888888887655 77776642 22 333323211
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeE
Q psy775 390 VKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVL 469 (1460)
Q Consensus 390 ~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~Gvl 469 (1460)
+ +.+++++.++++ . ..+ .+.|.+ +++..+|+.||+++.+| | +.+..|||+| +.|+
T Consensus 221 g-~~~~l~~~~~~~-----~-------~~v-~~~g~~--~~~~~~l~~ad~~v~~s---g-~~t~~Eam~~-----G~Pv 275 (350)
T cd03785 221 G-DLEEVKKAYEEL-----G-------VNY-EVFPFI--DDMAAAYAAADLVISRA---G-ASTVAELAAL-----GLPA 275 (350)
T ss_pred c-cHHHHHHHHhcc-----C-------CCe-EEeehh--hhHHHHHHhcCEEEECC---C-HhHHHHHHHh-----CCCE
Confidence 1 223444433321 1 113 345655 78899999999999877 3 5789999999 5556
Q ss_pred EEcCCCC--------chhcc---cccEEECCC--CHHHHHHHHHHHcCCCHHHHHHH
Q psy775 470 IVSPFAG--------AGEQM---HEALICNPY--EIDAAAEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 470 VlSe~aG--------aa~~L---~~allVNP~--D~~elA~AI~~aL~m~~~er~~R 513 (1460)
|++...| .++.+ +.|++++|. |+++++++|.++++.++..++++
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~ 332 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMA 332 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 7765443 13334 238899987 89999999999997544333333
No 186
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.86 E-value=4.5e-09 Score=120.37 Aligned_cols=85 Identities=22% Similarity=0.315 Sum_probs=69.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCccccc-CCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIH-PDGS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~-~g~~ 116 (1460)
++|+|+||||++ .+..+++++++||++|+++ |+.+++||||++..+...+.--+ ..++|+||+.+.. .++.
T Consensus 4 li~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~ 77 (272)
T PRK15126 4 LAAFDMDGTLLM-----PDHHLGEKTLSTLARLRER-DITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGEL 77 (272)
T ss_pred EEEEeCCCcCcC-----CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCE
Confidence 789999999996 2346999999999999999 99999999999988776653211 2468999999985 5567
Q ss_pred ccccCCCccchhhh
Q psy775 117 RFVHPIPTEFEDKV 130 (1460)
Q Consensus 117 i~~~pI~ee~vdeL 130 (1460)
++..+++.+.+..+
T Consensus 78 l~~~~i~~~~~~~i 91 (272)
T PRK15126 78 LHRQDLPADVAELV 91 (272)
T ss_pred EEeecCCHHHHHHH
Confidence 88899999877665
No 187
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.85 E-value=4.1e-09 Score=120.27 Aligned_cols=85 Identities=15% Similarity=0.153 Sum_probs=69.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---cccc--ceeEccCCccccc--
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEG--LTYAGNHGLEIIH-- 112 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~--~~~ig~hGaei~~-- 112 (1460)
++|+|+||||++ ....+++.+++||++|+++ |+.++|||||++..+...+ ++.. ..++++||+.+..
T Consensus 5 li~~DlDGTLl~-----~~~~i~~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~ 78 (270)
T PRK10513 5 LIAIDMDGTLLL-----PDHTISPAVKQAIAAARAK-GVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAA 78 (270)
T ss_pred EEEEecCCcCcC-----CCCccCHHHHHHHHHHHHC-CCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECC
Confidence 799999999996 2346999999999999999 9999999999988876554 3332 2478999999974
Q ss_pred CCCCccccCCCccchhhh
Q psy775 113 PDGSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 113 ~g~~i~~~pI~ee~vdeL 130 (1460)
.++.++..+++.+.+..+
T Consensus 79 ~~~~i~~~~l~~~~~~~i 96 (270)
T PRK10513 79 DGETVAQTALSYDDYLYL 96 (270)
T ss_pred CCCEEEecCCCHHHHHHH
Confidence 466788899998876654
No 188
>PRK10976 putative hydrolase; Provisional
Probab=98.82 E-value=6.8e-09 Score=118.36 Aligned_cols=85 Identities=21% Similarity=0.280 Sum_probs=68.9
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc-ccc-ceeEccCCccccc-CCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG-IEG-LTYAGNHGLEIIH-PDGS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~-~~~-~~~ig~hGaei~~-~g~~ 116 (1460)
++|+|+||||++- +..+++++++||++++++ |++++|||||+...+...+. +.. ..++|+||+.+.. .++.
T Consensus 4 li~~DlDGTLl~~-----~~~is~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 4 VVASDLDGTLLSP-----DHTLSPYAKETLKLLTAR-GIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred EEEEeCCCCCcCC-----CCcCCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 7899999999962 346999999999999999 99999999999888765543 221 2468999999985 5567
Q ss_pred ccccCCCccchhhh
Q psy775 117 RFVHPIPTEFEDKV 130 (1460)
Q Consensus 117 i~~~pI~ee~vdeL 130 (1460)
++..+++.+.+..+
T Consensus 78 i~~~~l~~~~~~~i 91 (266)
T PRK10976 78 IFSHNLDRDIASDL 91 (266)
T ss_pred ehhhcCCHHHHHHH
Confidence 78889998876665
No 189
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=98.82 E-value=7.2e-08 Score=115.88 Aligned_cols=171 Identities=13% Similarity=0.067 Sum_probs=106.4
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHh----CCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEK----HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTP 814 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~----~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~ 814 (1460)
+++++|+++||....||+...++++..++.+ .|+ +.++.++... + .+++++++... +
T Consensus 204 ~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~----~~~~vi~G~~----~---~~~~~L~~~~~--~------ 264 (382)
T PLN02605 204 EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPI----GQVVVICGRN----K---KLQSKLESRDW--K------ 264 (382)
T ss_pred CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCC----ceEEEEECCC----H---HHHHHHHhhcc--c------
Confidence 5788999999999999999999999876632 343 2333333211 1 23334433210 1
Q ss_pred CCccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchh
Q psy775 815 NWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDA 894 (1460)
Q Consensus 815 ~~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~ 894 (1460)
.-+.+.|.++ ++..+|++||++|.+| | ++++.||||| +.|+|++.....-+ .+ |
T Consensus 265 ---~~v~~~G~~~--~~~~l~~aaDv~V~~~---g-~~ti~EAma~-----g~PvI~~~~~pgqe-~g-----n------ 318 (382)
T PLN02605 265 ---IPVKVRGFVT--NMEEWMGACDCIITKA---G-PGTIAEALIR-----GLPIILNGYIPGQE-EG-----N------ 318 (382)
T ss_pred ---CCeEEEeccc--cHHHHHHhCCEEEECC---C-cchHHHHHHc-----CCCEEEecCCCccc-hh-----h------
Confidence 1145667774 7999999999999866 3 7899999999 78899988532111 00 0
Q ss_pred hhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Q psy775 895 AAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 974 (1460)
Q Consensus 895 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~ 974 (1460)
+ +++ .. .| .++ .+.|+++++++|.+.+.++++.++...+..+
T Consensus 319 ---------------~-~~i------------~~--~g------~g~--~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~ 360 (382)
T PLN02605 319 ---------------V-PYV------------VD--NG------FGA--FSESPKEIARIVAEWFGDKSDELEAMSENAL 360 (382)
T ss_pred ---------------H-HHH------------Hh--CC------cee--ecCCHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 0 010 00 11 122 2479999999999999974444444444556
Q ss_pred hHHHhcCHHHHHHHHHHH
Q psy775 975 KREKVHDVNYWMRSFLKG 992 (1460)
Q Consensus 975 ~~v~~~~~~~W~~~~l~~ 992 (1460)
++...+....-++..++.
T Consensus 361 ~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 361 KLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HhcCCchHHHHHHHHHHH
Confidence 666666666555554433
No 190
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.82 E-value=5.9e-09 Score=118.30 Aligned_cols=93 Identities=18% Similarity=0.303 Sum_probs=73.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcc-cc-ceeEccCCcccccC-CCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI-EG-LTYAGNHGLEIIHP-DGS 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~-~~-~~~ig~hGaei~~~-g~~ 116 (1460)
++|+|+||||++. ...++++++++|++|+++ |+.+++||||+...+...+.- .. ..++++||+.+... ++.
T Consensus 1 li~~DlDGTLl~~-----~~~i~~~~~~~i~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~ 74 (256)
T TIGR00099 1 LIFIDLDGTLLND-----DHTISPSTKEALAKLREK-GIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEI 74 (256)
T ss_pred CEEEeCCCCCCCC-----CCccCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCE
Confidence 4799999999972 346999999999999999 999999999998887766532 22 25789999999876 467
Q ss_pred ccccCCCccchhhhhhHHHhhccC
Q psy775 117 RFVHPIPTEFEDKVSDLLKTLQEK 140 (1460)
Q Consensus 117 i~~~pI~ee~vdeL~ii~~L~q~~ 140 (1460)
++..+++.+.+.++ +..+.+.+
T Consensus 75 i~~~~i~~~~~~~i--~~~~~~~~ 96 (256)
T TIGR00099 75 LYKKPLDLDLVEEI--LNFLKKHG 96 (256)
T ss_pred EeecCCCHHHHHHH--HHHHHHcC
Confidence 88899999877776 33344444
No 191
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.82 E-value=5.6e-09 Score=119.00 Aligned_cols=85 Identities=25% Similarity=0.405 Sum_probs=73.9
Q ss_pred EEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc---cccceeEccCCcccccCCC
Q psy775 39 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG---IEGLTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~---~~~~~~ig~hGaei~~~g~ 115 (1460)
-++++|+||||++ ++..+++.++++|++++++ |+.++|+|||++..+...+. ..+ .++++||+++...++
T Consensus 4 kli~~DlDGTLl~-----~~~~i~~~~~~al~~~~~~-g~~v~iaTGR~~~~~~~~~~~l~~~~-~~I~~NGa~i~~~~~ 76 (264)
T COG0561 4 KLLAFDLDGTLLD-----SNKTISPETKEALARLREK-GVKVVLATGRPLPDVLSILEELGLDG-PLITFNGALIYNGGE 76 (264)
T ss_pred eEEEEcCCCCccC-----CCCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHHcCCCc-cEEEeCCeEEecCCc
Confidence 4899999999997 3445999999999999999 99999999999988877663 333 578999999999988
Q ss_pred CccccCCCccchhhh
Q psy775 116 SRFVHPIPTEFEDKV 130 (1460)
Q Consensus 116 ~i~~~pI~ee~vdeL 130 (1460)
.++..+++.+.+..+
T Consensus 77 ~i~~~~l~~~~~~~i 91 (264)
T COG0561 77 LLFQKPLSREDVEEL 91 (264)
T ss_pred EEeeecCCHHHHHHH
Confidence 899999999887777
No 192
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.82 E-value=1.5e-07 Score=112.12 Aligned_cols=239 Identities=11% Similarity=0.081 Sum_probs=134.0
Q ss_pred CCCEEEEeCcchhHH-HHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhc--cCceeeeccHHhHHHHH
Q psy775 211 GTPLVWIHDYHLMLA-ANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGML--GCDMVGFHIEDYCLNFV 287 (1460)
Q Consensus 211 ~gDvVwIHDYhL~ll-P~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL--~aDlIgF~t~~yar~FL 287 (1460)
..|+|.+|......+ .....+.+ ++++....+ ---+.+.+..+| +++.+-+. .||++--.+....++++
T Consensus 86 ~pDiv~~~gd~~~~la~a~aa~~~-----~ipv~h~~~-g~~s~~~~~~~~--~~~~r~~~~~~ad~~~~~s~~~~~~l~ 157 (365)
T TIGR00236 86 KPDIVLVQGDTTTTLAGALAAFYL-----QIPVGHVEA-GLRTGDRYSPMP--EEINRQLTGHIADLHFAPTEQAKDNLL 157 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHh-----CCCEEEEeC-CCCcCCCCCCCc--cHHHHHHHHHHHHhccCCCHHHHHHHH
Confidence 369999996544444 34443322 466653211 111111121122 22222111 15666556666655554
Q ss_pred HHHHhhcCceecCCCcEEEECCeEEEEEEeeccc-Cchhhhhhhccchhhhc---cCCeEEEE-ecCcc-ccCCHHHHHH
Q psy775 288 DCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAI-PYERFVQLAQAAPRVID---TKQKIVLG-VDRLD-YTKGLVHRLK 361 (1460)
Q Consensus 288 ~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGI-D~~~f~~~~~~~~~~~~---~~~kvIL~-VgRLd-~~KGI~~lL~ 361 (1460)
+ .+....+|.++++|+ |.............+.+ .++++++. ..|.. ..||+..+++
T Consensus 158 ~------------------~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~ 219 (365)
T TIGR00236 158 R------------------ENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFK 219 (365)
T ss_pred H------------------cCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHH
Confidence 4 112234678889986 43222211111112222 22345554 44643 4599999999
Q ss_pred HHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEE
Q psy775 362 AFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVA 441 (1460)
Q Consensus 362 Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~ 441 (1460)
|+.++.+++|+++ ++.++.|. . . .+.++. ...+. ...| ++.+.++..++..+|+.||++
T Consensus 220 a~~~l~~~~~~~~----~vi~~~~~-~--~----~~~~~~---~~~~~------~~~v-~~~~~~~~~~~~~~l~~ad~v 278 (365)
T TIGR00236 220 AIREIVEEFEDVQ----IVYPVHLN-P--V----VREPLH---KHLGD------SKRV-HLIEPLEYLDFLNLAANSHLI 278 (365)
T ss_pred HHHHHHHHCCCCE----EEEECCCC-h--H----HHHHHH---HHhCC------CCCE-EEECCCChHHHHHHHHhCCEE
Confidence 9999998888753 44343332 1 1 112221 12211 1234 455889999999999999999
Q ss_pred EEccCCCCCCcceeeeeeeccCCCCCeEEEc-CCCCchhccc-c-cEEECCCCHHHHHHHHHHHcCCCH
Q psy775 442 LVTPLRDGMNLVAKEFVACQINEPPGVLIVS-PFAGAGEQMH-E-ALICNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 442 VvpSlrEGfnLValEamAcq~~~~~GvlVlS-e~aGaa~~L~-~-allVNP~D~~elA~AI~~aL~m~~ 507 (1460)
+.+| |.+..|||+| +.|+|.+ ..+|..+.+. + ++++ |.|+++++++|.++|+.++
T Consensus 279 v~~S-----g~~~~EA~a~-----g~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~~ 336 (365)
T TIGR00236 279 LTDS-----GGVQEEAPSL-----GKPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDPD 336 (365)
T ss_pred EECC-----hhHHHHHHHc-----CCCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhChH
Confidence 9988 4557999999 5566775 4444444432 2 5666 5799999999999998653
No 193
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=98.80 E-value=2.6e-07 Score=109.40 Aligned_cols=166 Identities=16% Similarity=0.164 Sum_probs=107.5
Q ss_pred EEEEEeecccCchhhhhhhccchhhh-ccCCeEEEEecCccccCCHHHHH-HHHHHHHHhCCCCCCcEEEEEEEcCCCCC
Q psy775 312 VRIRPLPIAIPYERFVQLAQAAPRVI-DTKQKIVLGVDRLDYTKGLVHRL-KAFETLLEKHPEHLEKVTLLQIAVPSRTD 389 (1460)
Q Consensus 312 vkV~viPiGID~~~f~~~~~~~~~~~-~~~~kvIL~VgRLd~~KGI~~lL-~Af~~lL~~~P~~~~kvvLvqig~psr~~ 389 (1460)
.++.++|+|+|.+.+.+.... .... ..+.++|+.+|+..+.|++..++ +|++++.+. | .+++++|.+.
T Consensus 154 ~~i~vi~n~v~~~~~~~~~~~-~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~~-~-----~~~~~~G~g~--- 223 (357)
T PRK00726 154 PKAVVTGNPVREEILALAAPP-ARLAGREGKPTLLVVGGSQGARVLNEAVPEALALLPEA-L-----QVIHQTGKGD--- 223 (357)
T ss_pred CCEEEECCCCChHhhcccchh-hhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhhC-c-----EEEEEcCCCc---
Confidence 578899999998776532111 1111 14678889999999999987777 898877432 2 2344444321
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeE
Q psy775 390 VKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVL 469 (1460)
Q Consensus 390 ~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~Gvl 469 (1460)
.+++.+.++ . +.. +.+.|.+ +++..+|+.||+++.+| | +.+.+|||+| +.|+
T Consensus 224 ---~~~~~~~~~-----~-------~~~--v~~~g~~--~~~~~~~~~~d~~i~~~---g-~~~~~Ea~~~-----g~Pv 275 (357)
T PRK00726 224 ---LEEVRAAYA-----A-------GIN--AEVVPFI--DDMAAAYAAADLVICRA---G-ASTVAELAAA-----GLPA 275 (357)
T ss_pred ---HHHHHHHhh-----c-------CCc--EEEeehH--hhHHHHHHhCCEEEECC---C-HHHHHHHHHh-----CCCE
Confidence 122222211 1 112 3345665 68889999999999877 3 5788999999 4555
Q ss_pred EEcCCCC--------chhcc---cccEEECCCC--HHHHHHHHHHHcCCCHHHHHHHHH
Q psy775 470 IVSPFAG--------AGEQM---HEALICNPYE--IDAAAEVIHRALTMPEDERTLRMN 515 (1460)
Q Consensus 470 VlSe~aG--------aa~~L---~~allVNP~D--~~elA~AI~~aL~m~~~er~~R~~ 515 (1460)
|++-..| .++.+ +.|++++|.| +++++++|.++++++...++++.+
T Consensus 276 v~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~ 334 (357)
T PRK00726 276 ILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEA 334 (357)
T ss_pred EEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 7664422 12334 2388899888 999999999999986554444433
No 194
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.77 E-value=2.7e-07 Score=108.25 Aligned_cols=162 Identities=16% Similarity=0.129 Sum_probs=100.7
Q ss_pred EEeecccCchhhhhhhccchhhhc-cCCeEEEEecCccccCCHHHH-HHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHH
Q psy775 315 RPLPIAIPYERFVQLAQAAPRVID-TKQKIVLGVDRLDYTKGLVHR-LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKE 392 (1460)
Q Consensus 315 ~viPiGID~~~f~~~~~~~~~~~~-~~~kvIL~VgRLd~~KGI~~l-L~Af~~lL~~~P~~~~kvvLvqig~psr~~~~e 392 (1460)
.++|+|+|...+...... ..... .+.++|+++||....|++... ++|++++.+. ++ .++.++ ++++.
T Consensus 153 ~~i~n~v~~~~~~~~~~~-~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~----g~~~~ 221 (348)
T TIGR01133 153 VLVGNPVRQEIRSLPVPR-ERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQT----GKNDL 221 (348)
T ss_pred eEEcCCcCHHHhcccchh-hhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEEC----CcchH
Confidence 688999997665432111 11111 467789999999889997664 4788777542 22 122233 12221
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEc
Q psy775 393 YQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVS 472 (1460)
Q Consensus 393 y~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlS 472 (1460)
.++++. +.+.+ ...++.+. . .++..+|+.||++|.+| | +.+.+|||+| +.|+|++
T Consensus 222 -~~l~~~----~~~~~-------l~~~v~~~---~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~-----g~Pvv~~ 276 (348)
T TIGR01133 222 -EKVKNV----YQELG-------IEAIVTFI---D-ENMAAAYAAADLVISRA---G-ASTVAELAAA-----GVPAILI 276 (348)
T ss_pred -HHHHHH----HhhCC-------ceEEecCc---c-cCHHHHHHhCCEEEECC---C-hhHHHHHHHc-----CCCEEEe
Confidence 233333 22222 12233332 2 27889999999999865 4 6899999999 5666877
Q ss_pred CCCCch-------hcc---cccEEECCCC--HHHHHHHHHHHcCCCHHHHHH
Q psy775 473 PFAGAG-------EQM---HEALICNPYE--IDAAAEVIHRALTMPEDERTL 512 (1460)
Q Consensus 473 e~aGaa-------~~L---~~allVNP~D--~~elA~AI~~aL~m~~~er~~ 512 (1460)
...|.. +.+ ..|++++|.| +++++++|.++++.+...+++
T Consensus 277 ~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 328 (348)
T TIGR01133 277 PYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAM 328 (348)
T ss_pred eCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHH
Confidence 665422 234 2388999887 999999999999865444333
No 195
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.74 E-value=1.9e-08 Score=115.43 Aligned_cols=89 Identities=20% Similarity=0.290 Sum_probs=68.6
Q ss_pred CCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCccccc
Q psy775 36 TNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIH 112 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~ 112 (1460)
.+..++|+|+||||+.- ...+++.++++|++|+++ |+++++||||+...+...+ ++.+..+||+||+.+..
T Consensus 5 ~~~~lI~~DlDGTLL~~-----~~~i~~~~~~ai~~l~~~-Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~ 78 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDS-----HTYDWQPAAPWLTRLREA-QVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQL 78 (271)
T ss_pred CCCeEEEEeCccCCcCC-----CCcCcHHHHHHHHHHHHc-CCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEe
Confidence 35679999999999962 345889999999999999 9999999999988876554 34334589999999986
Q ss_pred CCC-------CccccCCCccchhhh
Q psy775 113 PDG-------SRFVHPIPTEFEDKV 130 (1460)
Q Consensus 113 ~g~-------~i~~~pI~ee~vdeL 130 (1460)
.++ .++..+++.+.+..+
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 79 DEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcccCCCCceEeecCCCHHHHHHH
Confidence 532 234566777665555
No 196
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=98.74 E-value=1.4e-06 Score=104.22 Aligned_cols=138 Identities=9% Similarity=0.124 Sum_probs=88.0
Q ss_pred CCe-EEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCccc
Q psy775 340 KQK-IVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 418 (1460)
Q Consensus 340 ~~k-vIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~p 418 (1460)
+++ +++..|++...||+..+++++.+ .|++ .++.++.. +.+ +++++++++.+.+ ..
T Consensus 201 ~~~~il~~~G~~~~~k~~~~li~~l~~----~~~~----~~viv~G~---~~~----~~~~l~~~~~~~~--------~~ 257 (380)
T PRK13609 201 NKKILLIMAGAHGVLGNVKELCQSLMS----VPDL----QVVVVCGK---NEA----LKQSLEDLQETNP--------DA 257 (380)
T ss_pred CCcEEEEEcCCCCCCcCHHHHHHHHhh----CCCc----EEEEEeCC---CHH----HHHHHHHHHhcCC--------Cc
Confidence 444 55667999999999999988743 3543 35545421 222 2334444433221 13
Q ss_pred EEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcC-CCCch----hcc-cccEEECCCCH
Q psy775 419 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP-FAGAG----EQM-HEALICNPYEI 492 (1460)
Q Consensus 419 Iv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe-~aGaa----~~L-~~allVNP~D~ 492 (1460)
|++ .|.++ ++..+|++||+++. ++.|++++||||| +.|+|++. ..|.. ..+ ..+..+.+.|+
T Consensus 258 v~~-~g~~~--~~~~l~~~aD~~v~----~~gg~t~~EA~a~-----g~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~ 325 (380)
T PRK13609 258 LKV-FGYVE--NIDELFRVTSCMIT----KPGGITLSEAAAL-----GVPVILYKPVPGQEKENAMYFERKGAAVVIRDD 325 (380)
T ss_pred EEE-Eechh--hHHHHHHhccEEEe----CCCchHHHHHHHh-----CCCEEECCCCCCcchHHHHHHHhCCcEEEECCH
Confidence 444 47764 57889999999874 4558999999999 56668876 34421 122 22445556899
Q ss_pred HHHHHHHHHHcCCCHHHHHH
Q psy775 493 DAAAEVIHRALTMPEDERTL 512 (1460)
Q Consensus 493 ~elA~AI~~aL~m~~~er~~ 512 (1460)
++++++|.++++++...+++
T Consensus 326 ~~l~~~i~~ll~~~~~~~~m 345 (380)
T PRK13609 326 EEVFAKTEALLQDDMKLLQM 345 (380)
T ss_pred HHHHHHHHHHHCCHHHHHHH
Confidence 99999999999875544333
No 197
>PTZ00174 phosphomannomutase; Provisional
Probab=98.68 E-value=2.7e-08 Score=112.91 Aligned_cols=79 Identities=25% Similarity=0.320 Sum_probs=65.3
Q ss_pred EEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccc---c-ceeEccCCcccccCC
Q psy775 39 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE---G-LTYAGNHGLEIIHPD 114 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~---~-~~~ig~hGaei~~~g 114 (1460)
-++++|+||||+. ++..+++.+++||++++++ |+.++|||||++..+.+.++.. . ..++++||+.+...+
T Consensus 6 klia~DlDGTLL~-----~~~~is~~~~~ai~~l~~~-Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~ 79 (247)
T PTZ00174 6 TILLFDVDGTLTK-----PRNPITQEMKDTLAKLKSK-GFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDG 79 (247)
T ss_pred eEEEEECcCCCcC-----CCCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECC
Confidence 3899999999996 3456899999999999999 9999999999998888777532 1 245899999998777
Q ss_pred CCccccCCC
Q psy775 115 GSRFVHPIP 123 (1460)
Q Consensus 115 ~~i~~~pI~ 123 (1460)
+.++..+++
T Consensus 80 ~~i~~~~i~ 88 (247)
T PTZ00174 80 ELFHSQSIL 88 (247)
T ss_pred eEEEEEcch
Confidence 777777654
No 198
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.67 E-value=3.6e-08 Score=99.98 Aligned_cols=128 Identities=27% Similarity=0.352 Sum_probs=86.5
Q ss_pred CeEEEEecCccccCCHHHHHH-HHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccE
Q psy775 341 QKIVLGVDRLDYTKGLVHRLK-AFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419 (1460)
Q Consensus 341 ~kvIL~VgRLd~~KGI~~lL~-Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pI 419 (1460)
..++++.|++.+.||+..+++ |++++.+++|+. .|..+|... + ++.++ +. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~----~l~i~G~~~-----~------~l~~~----~~-------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDI----ELIIIGNGP-----D------ELKRL----RR-------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTE----EEEEECESS------------HHCCH----HH-------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCE----EEEEEeCCH-----H------HHHHh----cC-------CCE
Confidence 357899999999999999999 999999999974 466666421 1 12221 01 123
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccC-CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECCCCHHHH
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNPYEIDAA 495 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSl-rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP~D~~el 495 (1460)
. +.|.+ +++.++|+.||+++.|+. .+|++...+|||++ |.|+|+|.. |....+. .++.+ +.|++++
T Consensus 56 ~-~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~-----G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l 125 (135)
T PF13692_consen 56 R-FHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA-----GKPVIASDN-GAEGIVEEDGCGVLV-ANDPEEL 125 (135)
T ss_dssp E-EE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT-----T--EEEEHH-HCHCHS---SEEEE--TT-HHHH
T ss_pred E-EcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh-----CCCEEECCc-chhhheeecCCeEEE-CCCHHHH
Confidence 3 45777 689999999999999985 77999999999999 677788888 5555542 36667 8899999
Q ss_pred HHHHHHHcC
Q psy775 496 AEVIHRALT 504 (1460)
Q Consensus 496 A~AI~~aL~ 504 (1460)
+++|.++++
T Consensus 126 ~~~i~~l~~ 134 (135)
T PF13692_consen 126 AEAIERLLN 134 (135)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999999875
No 199
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.67 E-value=2.7e-08 Score=108.93 Aligned_cols=76 Identities=25% Similarity=0.427 Sum_probs=63.4
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccceeEccCCcccccCCCCccc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFV 119 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~~~ig~hGaei~~~g~~i~~ 119 (1460)
++|+|+||||++. +...+++.++++|++|+++ |+.++++|||+...+.+++......+++.||+.+...++.++.
T Consensus 1 li~~D~DgTL~~~----~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLDP----NAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcCC----CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEE
Confidence 4799999999973 2256899999999999999 8999999999999888777543466899999999987766555
Q ss_pred c
Q psy775 120 H 120 (1460)
Q Consensus 120 ~ 120 (1460)
.
T Consensus 76 ~ 76 (204)
T TIGR01484 76 E 76 (204)
T ss_pred c
Confidence 4
No 200
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.66 E-value=3.6e-08 Score=113.26 Aligned_cols=63 Identities=37% Similarity=0.559 Sum_probs=58.3
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCCCc
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGL 1457 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~~~ 1457 (1460)
+.++++||||||++++++|+++.+++.++++|++|++..++.++|+|||+..++.++++..++
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~ 76 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRF 76 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccc
Confidence 679999999999999999999999999999999999877889999999999999998875443
No 201
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.66 E-value=2.6e-08 Score=110.80 Aligned_cols=77 Identities=19% Similarity=0.270 Sum_probs=60.7
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCcccccC--C
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIHP--D 114 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~~--g 114 (1460)
++|+|+||||++ +...+|+++++||++|+++ |+++++||||+...+.+.. ++.. .++++||+.+... +
T Consensus 5 li~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~-~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 5 AIAIDIDGTITD-----KDRRLSLKAVEAIRKAEKL-GIPVILATGNVLCFARAAAKLIGTSG-PVIAENGGVISVGFDG 77 (230)
T ss_pred EEEEecCCCcCC-----CCCccCHHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHhCCCC-cEEEecCeEEEEcCCC
Confidence 799999999996 2345999999999999999 9999999999988876544 3332 4789999998764 4
Q ss_pred CCccccCCC
Q psy775 115 GSRFVHPIP 123 (1460)
Q Consensus 115 ~~i~~~pI~ 123 (1460)
+.++..+++
T Consensus 78 ~~~~~~~~~ 86 (230)
T PRK01158 78 KRIFLGDIE 86 (230)
T ss_pred CEEEEcchH
Confidence 455555553
No 202
>PLN02423 phosphomannomutase
Probab=98.62 E-value=6.7e-08 Score=109.81 Aligned_cols=89 Identities=16% Similarity=0.193 Sum_probs=68.9
Q ss_pred CCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc----ceeEccCCccc
Q psy775 35 TTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG----LTYAGNHGLEI 110 (1460)
Q Consensus 35 ~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~----~~~ig~hGaei 110 (1460)
+..+.++|||+||||++ ++..++++++++|++|+++ +.++++|||+...+.+.+.... ..+++.||+.+
T Consensus 4 ~~~~~i~~~D~DGTLl~-----~~~~i~~~~~~ai~~l~~~--i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i 76 (245)
T PLN02423 4 RKPGVIALFDVDGTLTA-----PRKEATPEMLEFMKELRKV--VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVA 76 (245)
T ss_pred CccceEEEEeccCCCcC-----CCCcCCHHHHHHHHHHHhC--CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEE
Confidence 44566888999999996 3446899999999999965 8999999999888877665431 35789999999
Q ss_pred ccCCCCccccC----CCccchhhh
Q psy775 111 IHPDGSRFVHP----IPTEFEDKV 130 (1460)
Q Consensus 111 ~~~g~~i~~~p----I~ee~vdeL 130 (1460)
...|+.++..+ ++.+.+.++
T Consensus 77 ~~~g~~i~~~~l~~~l~~~~~~~i 100 (245)
T PLN02423 77 HKDGKLIGTQSLKSFLGEDKLKEF 100 (245)
T ss_pred EeCCEEEEEecccccCCHHHHHHH
Confidence 98877777744 444555544
No 203
>KOG1387|consensus
Probab=98.61 E-value=3.2e-06 Score=97.22 Aligned_cols=194 Identities=15% Similarity=0.268 Sum_probs=139.0
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCC--CCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE--HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~--~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~ 816 (1460)
.....+++++.+.|.|+.. .|+-|..++++.|. ...++.|+.+|. .|+. ++ ++..+.++.++.+++-.-
T Consensus 267 ~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRne-eD-~ervk~Lkd~a~~L~i~~----- 337 (465)
T KOG1387|consen 267 ERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRNE-ED-EERVKSLKDLAEELKIPK----- 337 (465)
T ss_pred CcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCCh-hh-HHHHHHHHHHHHhcCCcc-----
Confidence 3457799999999999999 78888889999997 444566665554 3432 22 344456777777776541
Q ss_pred ccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhh
Q psy775 817 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAA 896 (1460)
Q Consensus 817 ~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~ 896 (1460)
-+.|.-++|.+++..++.-|-+.+-+-..|-||+.+.||||+ |.+.++..+|-.. | =+|.||
T Consensus 338 --~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA------GlIpi~h~SgGP~-l---DIV~~~------ 399 (465)
T KOG1387|consen 338 --HVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA------GLIPIVHNSGGPL-L---DIVTPW------ 399 (465)
T ss_pred --ceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc------CceEEEeCCCCCc-e---eeeecc------
Confidence 166778999999999999999999999999999999999998 4444555444222 1 133333
Q ss_pred hhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhH
Q psy775 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 976 (1460)
Q Consensus 897 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~ 976 (1460)
.|. ..+.+. | +.++-|++|.+++.+..++|....+..++.
T Consensus 400 ----------------------------------~G~----~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s 439 (465)
T KOG1387|consen 400 ----------------------------------DGE----TTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKS 439 (465)
T ss_pred ----------------------------------CCc----cceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 221 123444 2 677889999999999999887766666777
Q ss_pred HHhcCHHHHHHHHHHHHhhhhhc
Q psy775 977 EKVHDVNYWMRSFLKGMGTLITE 999 (1460)
Q Consensus 977 v~~~~~~~W~~~~l~~l~~~~~~ 999 (1460)
+...+-....+.|.+.+....++
T Consensus 440 ~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 440 LARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred HHHhhHHHHHHhHhHHHHHhhcc
Confidence 77777677777777666655544
No 204
>PLN02887 hydrolase family protein
Probab=98.59 E-value=6.5e-08 Score=121.44 Aligned_cols=85 Identities=18% Similarity=0.270 Sum_probs=68.4
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---cccc-c-------eeEccCCc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEG-L-------TYAGNHGL 108 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~-~-------~~ig~hGa 108 (1460)
++|+|+||||++ ++..+++++++||++++++ |+.++|||||+...+...+ ++.. . ..+++||+
T Consensus 310 LIa~DLDGTLLn-----~d~~Is~~t~eAI~kl~ek-Gi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA 383 (580)
T PLN02887 310 YIFCDMDGTLLN-----SKSQISETNAKALKEALSR-GVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGL 383 (580)
T ss_pred EEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCe
Confidence 899999999996 2346999999999999999 9999999999988876544 3321 1 24578999
Q ss_pred cccc-CCCCccccCCCccchhhh
Q psy775 109 EIIH-PDGSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 109 ei~~-~g~~i~~~pI~ee~vdeL 130 (1460)
.+.. .++.++..+++.+.+.++
T Consensus 384 ~I~d~~g~~I~~~~L~~e~v~eI 406 (580)
T PLN02887 384 LVYGRQGREIYRSNLDQEVCREA 406 (580)
T ss_pred EEEECCCcEEEEEeCCHHHHHHH
Confidence 9974 556788899999877766
No 205
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.56 E-value=4.5e-06 Score=99.67 Aligned_cols=140 Identities=16% Similarity=0.173 Sum_probs=89.6
Q ss_pred CCeE-EEEec-CccccC-CHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCc
Q psy775 340 KQKI-VLGVD-RLDYTK-GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416 (1460)
Q Consensus 340 ~~kv-IL~Vg-RLd~~K-GI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~ 416 (1460)
++++ ++..| |....| ++..+++|++.+.+++|++ .+++++. +.+..+++++ .+.+. + +.
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~----~~~~~~~~~~----~~~~~----~--~~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLV----NPKRREQIEE----ALAEY----A--GL 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecC----ChhhHHHHHH----HHhhc----C--CC
Confidence 4444 34434 666654 4789999999998888864 3444442 1222223333 22221 0 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEc-----------------CCCCchh
Q psy775 417 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVS-----------------PFAGAGE 479 (1460)
Q Consensus 417 ~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlS-----------------e~aGaa~ 479 (1460)
.+.++ ..++..+|++||+++.+| |.+.+|+|+| +.|+|++ .+.|..+
T Consensus 247 -~v~~~-----~~~~~~~~~~aDl~v~~s-----G~~~lEa~a~-----G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (380)
T PRK00025 247 -EVTLL-----DGQKREAMAAADAALAAS-----GTVTLELALL-----KVPMVVGYKVSPLTFWIAKRLVKVPYVSLPN 310 (380)
T ss_pred -CeEEE-----cccHHHHHHhCCEEEECc-----cHHHHHHHHh-----CCCEEEEEccCHHHHHHHHHHHcCCeeehHH
Confidence 13333 247899999999999998 7788899999 5566776 3444445
Q ss_pred cccc-----cEEECCCCHHHHHHHHHHHcCCCHHHHHHH
Q psy775 480 QMHE-----ALICNPYEIDAAAEVIHRALTMPEDERTLR 513 (1460)
Q Consensus 480 ~L~~-----allVNP~D~~elA~AI~~aL~m~~~er~~R 513 (1460)
.+.+ .++.+..|+++++++|.++|++++..++++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~ 349 (380)
T PRK00025 311 LLAGRELVPELLQEEATPEKLARALLPLLADGARRQALL 349 (380)
T ss_pred HhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 5533 366788899999999999999765544433
No 206
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.53 E-value=7.4e-06 Score=99.11 Aligned_cols=137 Identities=14% Similarity=0.153 Sum_probs=85.3
Q ss_pred CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q psy775 341 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 420 (1460)
Q Consensus 341 ~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv 420 (1460)
..+++++||+...||+..+++++ ++..|++ .++.++. ..+ ++++++.+. .+.. ..+
T Consensus 203 ~~ilv~~G~lg~~k~~~~li~~~---~~~~~~~----~~vvv~G----~~~---~l~~~l~~~---~~~~------~~v- 258 (391)
T PRK13608 203 QTILMSAGAFGVSKGFDTMITDI---LAKSANA----QVVMICG----KSK---ELKRSLTAK---FKSN------ENV- 258 (391)
T ss_pred CEEEEECCCcccchhHHHHHHHH---HhcCCCc----eEEEEcC----CCH---HHHHHHHHH---hccC------CCe-
Confidence 34567899999999999999985 3444554 3444442 111 122232221 1111 123
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc------cccEEECCCCHHH
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM------HEALICNPYEIDA 494 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L------~~allVNP~D~~e 494 (1460)
.+.|++ +++..+|++||+++.. +.|++..||||| +.|+|++...+..+.. ..+.-+-+.|.++
T Consensus 259 ~~~G~~--~~~~~~~~~aDl~I~k----~gg~tl~EA~a~-----G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~ 327 (391)
T PRK13608 259 LILGYT--KHMNEWMASSQLMITK----PGGITISEGLAR-----CIPMIFLNPAPGQELENALYFEEKGFGKIADTPEE 327 (391)
T ss_pred EEEecc--chHHHHHHhhhEEEeC----CchHHHHHHHHh-----CCCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHH
Confidence 345765 5789999999999863 458899999999 5666887543322211 1123333569999
Q ss_pred HHHHHHHHcCCCHHHHHH
Q psy775 495 AAEVIHRALTMPEDERTL 512 (1460)
Q Consensus 495 lA~AI~~aL~m~~~er~~ 512 (1460)
++++|.+++++++..+++
T Consensus 328 l~~~i~~ll~~~~~~~~m 345 (391)
T PRK13608 328 AIKIVASLTNGNEQLTNM 345 (391)
T ss_pred HHHHHHHHhcCHHHHHHH
Confidence 999999999865443333
No 207
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.52 E-value=1.2e-07 Score=104.95 Aligned_cols=69 Identities=19% Similarity=0.280 Sum_probs=56.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc-cccc-eeEccCCcccccCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG-IEGL-TYAGNHGLEIIHPD 114 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~-~~~~-~~ig~hGaei~~~g 114 (1460)
++|+|+||||++ ....+++.++++|++|+++ |+++++||||+...+..... +... .++++||+.+...+
T Consensus 3 ~v~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~-g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 3 LVAIDIDGTLTE-----PNRMISERAIEAIRKAEKK-GIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNK 73 (215)
T ss_pred EEEEecCCCcCC-----CCcccCHHHHHHHHHHHHC-CCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCC
Confidence 789999999996 2346999999999999999 99999999999888766543 2222 47899999998754
No 208
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.48 E-value=1.5e-07 Score=104.30 Aligned_cols=68 Identities=19% Similarity=0.291 Sum_probs=55.6
Q ss_pred EEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc-cc-cceeEccCCcccccCC
Q psy775 41 LLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG-IE-GLTYAGNHGLEIIHPD 114 (1460)
Q Consensus 41 lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~-~~-~~~~ig~hGaei~~~g 114 (1460)
+|||+||||++ +...++++++++|++|+++ |+.+++||||++..+.+... +. ...+++.||+.+...+
T Consensus 1 i~~DlDGTLl~-----~~~~i~~~~~~al~~l~~~-Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~ 70 (225)
T TIGR01482 1 IASDIDGTLTD-----PNRAINESALEAIRKAESV-GIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNE 70 (225)
T ss_pred CeEeccCccCC-----CCcccCHHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCC
Confidence 58999999996 2346899999999999999 99999999999888766543 22 2357899999988755
No 209
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.46 E-value=2.2e-07 Score=104.25 Aligned_cols=84 Identities=20% Similarity=0.222 Sum_probs=64.8
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCcccccCC---
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIHPD--- 114 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~~g--- 114 (1460)
++|||+||||+.. . .++++++++|++|+++ |+.++++|||+...+...+.--+ ..+++.||+.+..++
T Consensus 1 li~~DlDGTLl~~-~-----~~~~~~~~ai~~l~~~-G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~ 73 (225)
T TIGR02461 1 VIFTDLDGTLLPP-G-----YEPGPAREALEELKDL-GFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYF 73 (225)
T ss_pred CEEEeCCCCCcCC-C-----CCchHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccc
Confidence 4899999999972 1 2566899999999999 99999999999888766553222 258899999998742
Q ss_pred ------------CCccccCCCccchhhh
Q psy775 115 ------------GSRFVHPIPTEFEDKV 130 (1460)
Q Consensus 115 ------------~~i~~~pI~ee~vdeL 130 (1460)
..++..+++.+.+..+
T Consensus 74 ~~~~~~~~~~~~~~i~~~~l~~~~~~~i 101 (225)
T TIGR02461 74 PFPVGAGREVGNYEVIELGKPVAKIRAA 101 (225)
T ss_pred cccccccccCCCeEEEEcCCCHHHHHHH
Confidence 3467788888766554
No 210
>KOG1387|consensus
Probab=98.43 E-value=5.8e-06 Score=95.17 Aligned_cols=303 Identities=14% Similarity=0.199 Sum_probs=183.8
Q ss_pred CHHhHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEEE--eCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCcc
Q psy775 177 CAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWI--HDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWD 254 (1460)
Q Consensus 177 ~~~~w~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVwI--HDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~e 254 (1460)
+...|..+.-.-|+.+..|... +...+ . +.| ||| ..|-+. .|. +|+ +. +.+||-..|-|--|.|
T Consensus 122 ea~~~~hfTllgQaigsmIl~~-Eai~r----~-~Pd-i~IDtMGY~fs-~p~-~r~-l~----~~~V~aYvHYP~iS~D 187 (465)
T KOG1387|consen 122 EASTWKHFTLLGQAIGSMILAF-EAIIR----F-PPD-IFIDTMGYPFS-YPI-FRR-LR----RIPVVAYVHYPTISTD 187 (465)
T ss_pred ecccccceehHHHHHHHHHHHH-HHHHh----C-Cch-heEecCCCcch-hHH-HHH-Hc----cCceEEEEecccccHH
Confidence 3456777777777777766532 11111 1 344 788 566643 232 222 21 5799999998888877
Q ss_pred ccccCCCcHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCce---------ecCCCcEEEECCeEEEEEEeecccCchh
Q psy775 255 IFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCR---------VDRKNLLVEHGGRTVRIRPLPIAIPYER 325 (1460)
Q Consensus 255 ifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~---------~~~~~~~i~~~Gr~vkV~viPiGID~~~ 325 (1460)
+...+-.|+.= |+| ..----|-|-|..--.. .|.. ...+.+..-|+.+. ++++..-.+++.
T Consensus 188 ML~~l~qrq~s--~~l-----~~~KlaY~rlFa~lY~~-~G~~ad~vm~NssWT~nHI~qiW~~~~--~~iVyPPC~~e~ 257 (465)
T KOG1387|consen 188 MLKKLFQRQKS--GIL-----VWGKLAYWRLFALLYQS-AGSKADIVMTNSSWTNNHIKQIWQSNT--CSIVYPPCSTED 257 (465)
T ss_pred HHHHHHhhhhc--chh-----hhHHHHHHHHHHHHHHh-ccccceEEEecchhhHHHHHHHhhccc--eeEEcCCCCHHH
Confidence 77665443321 111 11122344555332111 1221 11222222243333 334444455555
Q ss_pred hhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCC--CCCcEEEEEEEcCCCCChHHHHHHHHHHHHH
Q psy775 326 FVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE--HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQL 403 (1460)
Q Consensus 326 f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~--~~~kvvLvqig~psr~~~~ey~~L~~ev~~l 403 (1460)
+...... .+.....+|++|..-|.|+.. .|+-|+-++.++|. ....+.|+.+| ..|+.. ++ +.-+.+..+
T Consensus 258 lks~~~t----e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRnee-D~-ervk~Lkd~ 329 (465)
T KOG1387|consen 258 LKSKFGT----EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNEE-DE-ERVKSLKDL 329 (465)
T ss_pred HHHHhcc----cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCChh-hH-HHHHHHHHH
Confidence 5443222 113456899999999999999 88888889999998 33456666555 333322 22 233444555
Q ss_pred HHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCch-hccc
Q psy775 404 VGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAG-EQMH 482 (1460)
Q Consensus 404 v~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa-~~L~ 482 (1460)
+.+++.. .-+-|.-++|.++|..+|.-|-+.+-+-..|-||+.+.||||+ |..+|+-..+|-. +.+.
T Consensus 330 a~~L~i~-------~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA-----GlIpi~h~SgGP~lDIV~ 397 (465)
T KOG1387|consen 330 AEELKIP-------KHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA-----GLIPIVHNSGGPLLDIVT 397 (465)
T ss_pred HHhcCCc-------cceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc-----CceEEEeCCCCCceeeee
Confidence 5565543 1245568999999999999999999999999999999999998 3344444433322 1221
Q ss_pred ---c---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 483 ---E---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 483 ---~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
| |.+. | +.+|-|++|.+++.+..++|-...+..+..+.+++
T Consensus 398 ~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFs 444 (465)
T KOG1387|consen 398 PWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFG 444 (465)
T ss_pred ccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhh
Confidence 1 6665 4 56789999999999999987776666677776665
No 211
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.42 E-value=4.2e-07 Score=114.20 Aligned_cols=72 Identities=18% Similarity=0.171 Sum_probs=56.9
Q ss_pred cEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCcccccCCC
Q psy775 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~~g~ 115 (1460)
+-++|+|+||||++.. ..+++.+++||++|+++ |+.+++||||+...+......-+ ..+++.||+.+..+++
T Consensus 416 ~KLIfsDLDGTLLd~d-----~~i~~~t~eAL~~L~ek-GI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~ 489 (694)
T PRK14502 416 KKIVYTDLDGTLLNPL-----TYSYSTALDALRLLKDK-ELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKD 489 (694)
T ss_pred eeEEEEECcCCCcCCC-----CccCHHHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCC
Confidence 3489999999999732 24667899999999999 99999999999888765553211 3588999999986543
No 212
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.39 E-value=3.6e-07 Score=104.06 Aligned_cols=85 Identities=21% Similarity=0.183 Sum_probs=62.9
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCcccccCCCC-
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIHPDGS- 116 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~~g~~- 116 (1460)
++|+|+||||+.-. ...++.++++|++|+++ |+.+++||||++..+...+.--+ ..++|+||+.+...++.
T Consensus 1 li~~DlDGTll~~~-----~~~~~~~~~~i~~l~~~-g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~ 74 (256)
T TIGR01486 1 WIFTDLDGTLLDPH-----GYDWGPAKEVLERLQEL-GIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWF 74 (256)
T ss_pred CEEEcCCCCCcCCC-----CcCchHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcc
Confidence 47999999999632 21344699999999999 99999999999888776653222 36889999999876542
Q ss_pred ------ccccCCCccchhhh
Q psy775 117 ------RFVHPIPTEFEDKV 130 (1460)
Q Consensus 117 ------i~~~pI~ee~vdeL 130 (1460)
++..+++.+.+..+
T Consensus 75 ~~~~~~~~~~~i~~~~~~~i 94 (256)
T TIGR01486 75 TEPEYPVIALGIPYEKIRAR 94 (256)
T ss_pred cCCCeEEEEcCCCHHHHHHH
Confidence 34566776544444
No 213
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.39 E-value=1.9e-05 Score=92.84 Aligned_cols=164 Identities=14% Similarity=0.188 Sum_probs=95.8
Q ss_pred CCCEEEEEEcCccccCCHHHHH-HHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRL-KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 817 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL-~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~ 817 (1460)
.++++|+.+++....|+....+ .|++.+. + ++ +.++.++.+ + +.+++++ .+.+. +
T Consensus 179 ~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G~--g---~~~~l~~----~~~~~----~----- 234 (350)
T cd03785 179 PGKPTLLVFGGSQGARAINEAVPEALAELL-R-KR----LQVIHQTGK--G---DLEEVKK----AYEEL----G----- 234 (350)
T ss_pred CCCeEEEEECCcHhHHHHHHHHHHHHHHhh-c-cC----eEEEEEcCC--c---cHHHHHH----HHhcc----C-----
Confidence 5677888888888888887655 6776653 2 32 333322222 1 2223333 33222 1
Q ss_pred cEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 818 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 818 pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
+-+.+.|.+ +++..+|+.||+++.+| | +.+..|||+| +.|+|++...|...- .++...+.+.+
T Consensus 235 ~~v~~~g~~--~~~~~~l~~ad~~v~~s---g-~~t~~Eam~~-----G~Pvv~~~~~~~~~~------~~~~~~~~l~~ 297 (350)
T cd03785 235 VNYEVFPFI--DDMAAAYAAADLVISRA---G-ASTVAELAAL-----GLPAILIPLPYAADD------HQTANARALVK 297 (350)
T ss_pred CCeEEeehh--hhHHHHHHhcCEEEECC---C-HhHHHHHHHh-----CCCEEEeecCCCCCC------cHHHhHHHHHh
Confidence 114566665 78999999999999876 3 4789999999 678888776542110 00000011111
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY--EIDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~--d~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
...+++++|. |.++++++|...++.+...++.+.+ .++
T Consensus 298 ---------------------------------------~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~-~~~ 337 (350)
T cd03785 298 ---------------------------------------AGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEA-ARS 337 (350)
T ss_pred ---------------------------------------CCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHH-HHh
Confidence 1235788887 9999999999999754433333333 355
Q ss_pred HHHhcCHH
Q psy775 976 REKVHDVN 983 (1460)
Q Consensus 976 ~v~~~~~~ 983 (1460)
++..+...
T Consensus 338 ~~~~~~~~ 345 (350)
T cd03785 338 LARPDAAE 345 (350)
T ss_pred cCCCCHHH
Confidence 55544433
No 214
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.38 E-value=9.2e-07 Score=89.73 Aligned_cols=99 Identities=27% Similarity=0.362 Sum_probs=68.7
Q ss_pred EEEEEEcCccccCCHHHHHH-HHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 742 KIVLGVDRLDYTKGLVHRLK-AFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 742 kiIl~VdRLd~~KGi~~kL~-Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
.+|++.|++.+.||+...++ |++++.+++|+ +.|+.+|... + ++.++ +. +-+
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~----~~l~i~G~~~-----~------~l~~~----~~--------~~v 55 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPD----IELIIIGNGP-----D------ELKRL----RR--------PNV 55 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTT----EEEEEECESS------------HHCCH----HH--------CTE
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcC----EEEEEEeCCH-----H------HHHHh----cC--------CCE
Confidence 46889999999999999999 99999999996 5666666532 1 12222 11 115
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCC-ccCCCccceeeeeeccCCCCceEEEcCC
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPF 874 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSl-rEGmnLva~EymAc~~~~~~g~lIlSe~ 874 (1460)
.+.|.+ +|+.++++.||+++.|+. .+|++...+|||++ +.|+|+|..
T Consensus 56 ~~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~-----G~pvi~~~~ 103 (135)
T PF13692_consen 56 RFHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA-----GKPVIASDN 103 (135)
T ss_dssp EEE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT-----T--EEEEHH
T ss_pred EEcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh-----CCCEEECCc
Confidence 567777 689999999999999984 78999999999999 778899887
No 215
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.35 E-value=3e-05 Score=91.81 Aligned_cols=106 Identities=14% Similarity=0.144 Sum_probs=70.6
Q ss_pred CCCEEEEEEcCccc---cCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKIVLGVDRLDY---TKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~---~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++.+++..+|... .||+...++|++++.++ + +.++..+.+ + .++++++.+.+.+..
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~~-----~----~~~~l~~~~~~~~~~----- 256 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNHP-----R----TRPRIREAGLEFLGH----- 256 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECCC-----C----hHHHHHHHHHhhccC-----
Confidence 34567888999875 79999999999987443 2 333322221 1 223444444444320
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
.+.+.+.+....+++..+|+.||++|.+|- | +..|+++| +.|+|++...
T Consensus 257 -~~~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~-----g~PvI~~~~~ 305 (363)
T cd03786 257 -HPNVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFL-----GVPVLNLRDR 305 (363)
T ss_pred -CCCEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhc-----CCCEEeeCCC
Confidence 112456667778899999999999999994 4 46899998 6778887643
No 216
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.34 E-value=5.4e-07 Score=103.73 Aligned_cols=69 Identities=20% Similarity=0.224 Sum_probs=55.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcccc--ceeEccCCcccccCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG--LTYAGNHGLEIIHPD 114 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~--~~~ig~hGaei~~~g 114 (1460)
++|+|+||||++- ...+++.++++|++|+++ |+.++|||||+...+...+...+ ..+++.||+.+..++
T Consensus 6 li~~DlDGTLl~~-----~~~~~~~~~~ai~~l~~~-Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~ 76 (273)
T PRK00192 6 LVFTDLDGTLLDH-----HTYSYEPAKPALKALKEK-GIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPK 76 (273)
T ss_pred EEEEcCcccCcCC-----CCcCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecc
Confidence 7999999999962 235778899999999999 99999999999888766553222 247899999997643
No 217
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=98.34 E-value=7e-05 Score=89.82 Aligned_cols=168 Identities=8% Similarity=0.085 Sum_probs=103.9
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
+.+++..|++...||+...++++. +.|+ +.++.++.. +. .+++++++++++.+ .. +
T Consensus 203 ~~il~~~G~~~~~k~~~~li~~l~----~~~~----~~~viv~G~---~~----~~~~~l~~~~~~~~--------~~-v 258 (380)
T PRK13609 203 KILLIMAGAHGVLGNVKELCQSLM----SVPD----LQVVVVCGK---NE----ALKQSLEDLQETNP--------DA-L 258 (380)
T ss_pred cEEEEEcCCCCCCcCHHHHHHHHh----hCCC----cEEEEEeCC---CH----HHHHHHHHHHhcCC--------Cc-E
Confidence 345666799999999998888864 2354 345555432 11 23455555544322 12 4
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcC-CCCcchhhhhhhhcCcccchhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP-FAGAGEQMHEALICNPYEIDAAAEVI 899 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe-~aG~~~~L~~~l~vnP~~~~~~~~~~ 899 (1460)
.+.|.++ ++..+|+.||+++. ++.+++..|||+| +.|+|++. ..|... +.++
T Consensus 259 ~~~g~~~--~~~~l~~~aD~~v~----~~gg~t~~EA~a~-----g~PvI~~~~~~g~~~--------------~n~~-- 311 (380)
T PRK13609 259 KVFGYVE--NIDELFRVTSCMIT----KPGGITLSEAAAL-----GVPVILYKPVPGQEK--------------ENAM-- 311 (380)
T ss_pred EEEechh--hHHHHHHhccEEEe----CCCchHHHHHHHh-----CCCEEECCCCCCcch--------------HHHH--
Confidence 4557763 57899999999874 3458899999999 67888875 344111 0000
Q ss_pred hccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHh
Q psy775 900 FCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKV 979 (1460)
Q Consensus 900 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~ 979 (1460)
++ +- .| ..+.+.|+++++++|.+.++.+...++.+ +..+++...
T Consensus 312 -------------~~--------------~~-------~G-~~~~~~~~~~l~~~i~~ll~~~~~~~~m~-~~~~~~~~~ 355 (380)
T PRK13609 312 -------------YF--------------ER-------KG-AAVVIRDDEEVFAKTEALLQDDMKLLQMK-EAMKSLYLP 355 (380)
T ss_pred -------------HH--------------Hh-------CC-cEEEECCHHHHHHHHHHHHCCHHHHHHHH-HHHHHhCCC
Confidence 00 00 11 22335699999999999998755443433 344566667
Q ss_pred cCHHHHHHHHHHHHhh
Q psy775 980 HDVNYWMRSFLKGMGT 995 (1460)
Q Consensus 980 ~~~~~W~~~~l~~l~~ 995 (1460)
++.+..++.+++.+..
T Consensus 356 ~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 356 EPADHIVDDILAENHV 371 (380)
T ss_pred chHHHHHHHHHHhhhh
Confidence 7888888877766543
No 218
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.31 E-value=7.6e-07 Score=98.87 Aligned_cols=68 Identities=18% Similarity=0.221 Sum_probs=53.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc---cccceeEccCCcccccC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG---IEGLTYAGNHGLEIIHP 113 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~---~~~~~~ig~hGaei~~~ 113 (1460)
++|+|+||||+.- + ..+++.++++|++|+++ |+++++||||+...+...+. +....++|+||+.+...
T Consensus 1 ~i~~DlDGTLL~~----~-~~~~~~~~~~l~~l~~~-gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~ 71 (221)
T TIGR02463 1 WVFSDLDGTLLDS----H-SYDWQPAAPWLTRLQEA-GIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLE 71 (221)
T ss_pred CEEEeCCCCCcCC----C-CCCcHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcC
Confidence 4799999999962 2 23445599999999999 99999999999888766553 33235899999999764
No 219
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.31 E-value=2.3e-05 Score=92.90 Aligned_cols=218 Identities=14% Similarity=0.012 Sum_probs=121.8
Q ss_pred CCCCEEEEeCcchhH--HHHHHHhhhhccCCCceEEEEEecCCCCccccccCC-CcHHHHhhhccCceeeeccHHhHHHH
Q psy775 210 SGTPLVWIHDYHLML--AANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFP-WSDEILQGMLGCDMVGFHIEDYCLNF 286 (1460)
Q Consensus 210 ~~gDvVwIHDYhL~l--lP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP-~r~eil~gLL~aDlIgF~t~~yar~F 286 (1460)
.+||+|.+|-.-+.. ++..+-.++. ..++++.+++|-=+|.. +.... .+.....-+-.||.|..++......+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k--~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~~~l 138 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLK--KKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMKDRL 138 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHH--HcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHHHHH
Confidence 368999998754432 3333322232 12689999999766532 11111 12333444446888888887665555
Q ss_pred HHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHH
Q psy775 287 VDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETL 366 (1460)
Q Consensus 287 L~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~l 366 (1460)
.+. |. ...++.+.++..+...... .....+++.|+|+||+....++.
T Consensus 139 ~~~-----g~-------------~~~~i~~~~~~~~~~~~~~------~~~~~~~~~i~yaG~l~k~~~l~--------- 185 (333)
T PRK09814 139 VEE-----GL-------------TTDKIIVQGIFDYLNDIEL------VKTPSFQKKINFAGNLEKSPFLK--------- 185 (333)
T ss_pred HHc-----CC-------------CcCceEecccccccccccc------cccccCCceEEEecChhhchHHH---------
Confidence 431 21 1112223333222211100 00013456899999999433211
Q ss_pred HHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccC
Q psy775 367 LEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPL 446 (1460)
Q Consensus 367 L~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSl 446 (1460)
+..|+ +.|+++|.+. +.. .. ... +.+.|.++.+|+..+|+. |+.+++.-
T Consensus 186 -~~~~~----~~l~i~G~g~-----~~~-----------~~--------~~~-V~f~G~~~~eel~~~l~~-~~gLv~~~ 234 (333)
T PRK09814 186 -NWSQG----IKLTVFGPNP-----EDL-----------EN--------SAN-ISYKGWFDPEELPNELSK-GFGLVWDG 234 (333)
T ss_pred -hcCCC----CeEEEECCCc-----ccc-----------cc--------CCC-eEEecCCCHHHHHHHHhc-CcCeEEcC
Confidence 12444 3455555332 110 00 112 445699999999999987 66665431
Q ss_pred C-----------CCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHH
Q psy775 447 R-----------DGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRA 502 (1460)
Q Consensus 447 r-----------EGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~a 502 (1460)
- -.+.--..||||| |.|+|++..++.++.+.+ |++|+ +.++++++|...
T Consensus 235 ~~~~~~~~~y~~~~~P~K~~~ymA~-----G~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~ 297 (333)
T PRK09814 235 DTNDGEYGEYYKYNNPHKLSLYLAA-----GLPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI 297 (333)
T ss_pred CCCCccchhhhhccchHHHHHHHHC-----CCCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc
Confidence 1 1122225678999 677899999888888843 88887 678999999874
No 220
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=98.30 E-value=7.2e-06 Score=97.22 Aligned_cols=172 Identities=17% Similarity=0.152 Sum_probs=108.0
Q ss_pred CCCEEEEEEcCccccCCHHHHH-HHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRL-KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 817 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL-~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~ 817 (1460)
.+.++|+.++|....|++...+ +|++++.+ .| .+++++|.+. .++++++ .+ . + .+
T Consensus 181 ~~~~~i~~~gg~~~~~~~~~~l~~a~~~~~~-~~-----~~~~~~G~g~------~~~~~~~----~~-~----~---~~ 236 (357)
T PRK00726 181 EGKPTLLVVGGSQGARVLNEAVPEALALLPE-AL-----QVIHQTGKGD------LEEVRAA----YA-A----G---IN 236 (357)
T ss_pred CCCeEEEEECCcHhHHHHHHHHHHHHHHhhh-Cc-----EEEEEcCCCc------HHHHHHH----hh-c----C---Cc
Confidence 4677889999999999987777 88887643 33 2455555432 1122221 11 1 1 12
Q ss_pred cEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 818 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 818 pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
+.+.|.+ ++...+|..||+++.+| | +.+.+|||+| +.|+|++...|... .+....++
T Consensus 237 --v~~~g~~--~~~~~~~~~~d~~i~~~---g-~~~~~Ea~~~-----g~Pvv~~~~~~~~~----------~~~~~~~~ 293 (357)
T PRK00726 237 --AEVVPFI--DDMAAAYAAADLVICRA---G-ASTVAELAAA-----GLPAILVPLPHAAD----------DHQTANAR 293 (357)
T ss_pred --EEEeehH--hhHHHHHHhCCEEEECC---C-HHHHHHHHHh-----CCCEEEecCCCCCc----------CcHHHHHH
Confidence 4456665 68899999999999877 3 5788999999 67888887654221 00000111
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYE--IDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d--~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
.+. ....+++++|.| +++++++|.++++++...++.+.+ .++
T Consensus 294 ~i~-----------------------------------~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~-~~~ 337 (357)
T PRK00726 294 ALV-----------------------------------DAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEA-ARA 337 (357)
T ss_pred HHH-----------------------------------HCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHH-HHh
Confidence 110 012346788877 999999999999985554444444 366
Q ss_pred HHHhcCHHHHHHHHHHHH
Q psy775 976 REKVHDVNYWMRSFLKGM 993 (1460)
Q Consensus 976 ~v~~~~~~~W~~~~l~~l 993 (1460)
+....+...-++.+++.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 338 LGKPDAAERLADLIEELA 355 (357)
T ss_pred cCCcCHHHHHHHHHHHHh
Confidence 666677777776666544
No 221
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.28 E-value=5.5e-05 Score=94.90 Aligned_cols=261 Identities=12% Similarity=0.084 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCEEE--EeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccC
Q psy775 182 RAYAQVNQEFADKTIKALQILAQEEPADSGTPLVW--IHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLF 259 (1460)
Q Consensus 182 ~~Y~~VN~~FA~~I~e~~~~~~~~~~~~~~gDvVw--IHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~L 259 (1460)
..|...+..+++.+.+.++.. ..++|++. ++.-|... +....| ..++.+..|+ ...
T Consensus 201 ~~f~~~~eLi~efl~~l~~~~------~~~~d~~Iva~Dr~~~~~----~~~~~~----~~~~~ls~f~---~~~----- 258 (519)
T TIGR03713 201 LEYSNMDELIREKFQRYLKVE------VKDDDEIIVASDDRHNFL----VADTFP----AKNLIFSLFS---ERN----- 258 (519)
T ss_pred EEECCHHHHHHHHHHHHHHhh------CCCCCEEEEEcCchhhhh----HhhcCc----cceEEEEecc---Ccc-----
Confidence 345566667777665543311 12578777 67667665 333222 2225556776 111
Q ss_pred CC--cHHHHhhhccCceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhh
Q psy775 260 PW--SDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI 337 (1460)
Q Consensus 260 P~--r~eil~gLL~aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~ 337 (1460)
|. -+..+..+..+|.+-..|.+=.+........ .. ...+|..+|.+.- .......+ +
T Consensus 259 ~~~~y~~~l~~~~~~d~iIv~T~~q~~~l~~~~~~--------------~~-~~~~v~~Ip~~~~-~~~~~~s~-----r 317 (519)
T TIGR03713 259 RHHTYLDLYESLSRADLIIVDREDIERLLEENYRE--------------NY-VEFDISRITPFDT-RLRLGQSQ-----Q 317 (519)
T ss_pred cccchhhhhhChhhcCeEEEcCHHHHHHHHHHhhh--------------cc-cCCcceeeCccce-EEecChhh-----c
Confidence 22 2567777777887776564333222211000 00 1123444554433 11111100 1
Q ss_pred ccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCC--
Q psy775 338 DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN-- 415 (1460)
Q Consensus 338 ~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~-- 415 (1460)
..++.|.+++||| +.|-+..+|+|+.++.+++|+.. |...|..+. . ++.+.+.+++.++|..++...
T Consensus 318 ~~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~~---~---~~~~~l~~~i~~~~~~~~~~~~~ 386 (519)
T TIGR03713 318 LYETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNND---N---DITQLLEDILEQINEEYNQDKNF 386 (519)
T ss_pred ccceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecCc---h---hHHHHHHHHHHHHHhhhchhhhc
Confidence 1445566677799 99999999999999999999863 444553321 1 223444455555544421100
Q ss_pred --------------------cccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCC
Q psy775 416 --------------------WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 475 (1460)
Q Consensus 416 --------------------~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~a 475 (1460)
-...+.|.|..+..++.+.|..|.++|.+|..|||+ .-+|||+. |-|.| .-
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~-----GiPqI---ny 457 (519)
T TIGR03713 387 FSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA-----GIPQI---NK 457 (519)
T ss_pred cccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc-----CCCee---ec
Confidence 003566778888889999999999999999999999 99999987 33444 44
Q ss_pred Cchhccc---ccEEECCCCHHHHHHHHHHHcCCCH
Q psy775 476 GAGEQMH---EALICNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 476 Gaa~~L~---~allVNP~D~~elA~AI~~aL~m~~ 507 (1460)
|.++.+. .|.+| .|.+++++||...|..+.
T Consensus 458 g~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 458 VETDYVEHNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred CCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 6666664 38999 699999999999999654
No 222
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.23 E-value=1.2e-06 Score=93.16 Aligned_cols=71 Identities=10% Similarity=0.034 Sum_probs=52.0
Q ss_pred EEEEecCCCcCCCCC------CCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhh---hhh-c-------ccccee
Q psy775 40 ALLLDYDGTLAPIAP------HPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM---EMV-G-------IEGLTY 102 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~------~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~---~~l-~-------~~~~~~ 102 (1460)
++++||||||+.... .-....+++++.+++++++++ |++++++|||+...+. +.+ . ++...+
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~-G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l 79 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN-GYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV 79 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc-CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE
Confidence 489999999996321 000147899999999999999 9999999999977653 222 1 222356
Q ss_pred EccCCcccc
Q psy775 103 AGNHGLEII 111 (1460)
Q Consensus 103 ig~hGaei~ 111 (1460)
++++|+.+.
T Consensus 80 i~~~g~~~~ 88 (157)
T smart00775 80 LLSPDRLFA 88 (157)
T ss_pred EEcCCcchh
Confidence 788888775
No 223
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=98.22 E-value=2.9e-05 Score=98.68 Aligned_cols=148 Identities=13% Similarity=0.114 Sum_probs=103.4
Q ss_pred CCeEEEEecCccccCCHHHHHHHHHHHHH--hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcc
Q psy775 340 KQKIVLGVDRLDYTKGLVHRLKAFETLLE--KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 417 (1460)
Q Consensus 340 ~~kvIL~VgRLd~~KGI~~lL~Af~~lL~--~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~ 417 (1460)
+..++.+|.|+...||...++.+++++++ ++|+. .+.+|..|.+...+.. -.++.+.+..++.+ ..|. .
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~----~ 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR----G 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC----C
Confidence 34588899999999999999999999986 55552 4667777755444321 13445555555432 0021 1
Q ss_pred cEEEEcCCCCHHHHHHHHHhccEEEE-ccC-CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc---cccEEECC---
Q psy775 418 PIRYIYGCISQDELASFYRDAAVALV-TPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM---HEALICNP--- 489 (1460)
Q Consensus 418 pIv~~~g~v~~eeL~aLY~aADV~Vv-pSl-rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L---~~allVNP--- 489 (1460)
.|+++.+ .+.+--..+|.+||+++. ||. +|.-|+.=.=||. .|.|-.|-.-|...+. ..|..+.+
T Consensus 459 kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~------nGgL~~sv~DG~~~E~~~~~nGf~f~~~~~ 531 (601)
T TIGR02094 459 RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAM------NGVLNLSILDGWWGEGYDGDNGWAIGDGEE 531 (601)
T ss_pred CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHH------cCCceeecccCcccccCCCCcEEEECCCcc
Confidence 3555544 333333357999999999 888 9999998877776 3777888887776654 23888885
Q ss_pred ---------CCHHHHHHHHHHHc
Q psy775 490 ---------YEIDAAAEVIHRAL 503 (1460)
Q Consensus 490 ---------~D~~elA~AI~~aL 503 (1460)
.|.+++-++|.+++
T Consensus 532 ~~~~~~~d~~da~~l~~~L~~ai 554 (601)
T TIGR02094 532 YDDEEEQDRLDAEALYDLLENEV 554 (601)
T ss_pred ccccccccCCCHHHHHHHHHHHH
Confidence 89999999998877
No 224
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.19 E-value=1.6e-05 Score=93.45 Aligned_cols=167 Identities=17% Similarity=0.216 Sum_probs=100.7
Q ss_pred CCCEEEEEEcCccccCCHHHHH-HHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRL-KAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 817 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL-~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~ 817 (1460)
.++++|++++|....|++...+ .|++++.++ ++ .++.++ +. + + . +++++.+.+.+ ..
T Consensus 177 ~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~-g~-~--~-~----~~l~~~~~~~~-------l~ 234 (348)
T TIGR01133 177 EGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQT-GK-N--D-L----EKVKNVYQELG-------IE 234 (348)
T ss_pred CCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEEC-Cc-c--h-H----HHHHHHHhhCC-------ce
Confidence 4677899999988888876654 788776443 22 222222 21 1 1 1 23444443322 12
Q ss_pred cEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhh
Q psy775 818 PIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897 (1460)
Q Consensus 818 pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~ 897 (1460)
.++.+. .. ++..+|+.||++|.+| | +.+.+|||+| +.|+|++...|..... ..|+
T Consensus 235 ~~v~~~---~~-~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~-----g~Pvv~~~~~~~~~~~----~~~~-------- 289 (348)
T TIGR01133 235 AIVTFI---DE-NMAAAYAAADLVISRA---G-ASTVAELAAA-----GVPAILIPYPYAADDQ----YYNA-------- 289 (348)
T ss_pred EEecCc---cc-CHHHHHHhCCEEEECC---C-hhHHHHHHHc-----CCCEEEeeCCCCccch----hhHH--------
Confidence 233333 22 7889999999999865 4 6799999999 6788988776543200 0000
Q ss_pred hhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCC--HHHHHHHHHHHhCCCHHHHHHHHHHHHh
Q psy775 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYE--IDAAAEVIHRALTMPEDERTLRMNYLRK 975 (1460)
Q Consensus 898 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d--~~~iA~ai~~aL~m~~~er~~r~~~~~~ 975 (1460)
+++ . ....+++++|.| +++++++|.+.++.+...+++ .+..++
T Consensus 290 --------------~~i------------~--------~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~-~~~~~~ 334 (348)
T TIGR01133 290 --------------KFL------------E--------DLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAM-AEAARK 334 (348)
T ss_pred --------------HHH------------H--------HCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHH-HHHHHh
Confidence 111 0 012457788876 999999999999765443333 344466
Q ss_pred HHHhcCHHHHHH
Q psy775 976 REKVHDVNYWMR 987 (1460)
Q Consensus 976 ~v~~~~~~~W~~ 987 (1460)
++..+...++++
T Consensus 335 ~~~~~~~~~i~~ 346 (348)
T TIGR01133 335 LAKPDAAKRIAE 346 (348)
T ss_pred cCCccHHHHHHh
Confidence 666666666554
No 225
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.19 E-value=2.5e-06 Score=98.38 Aligned_cols=69 Identities=17% Similarity=0.262 Sum_probs=57.2
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccccceeEccCCcccccCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEGLTYAGNHGLEIIHPDG 115 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~~~~ig~hGaei~~~g~ 115 (1460)
++|+|+||||++.. ..+++.++++|++|+++ |+.|++||||+...+.... ++.. .+|+.||+.+..+..
T Consensus 3 LIftDLDGTLLd~~-----~~~~~~a~~aL~~Lk~~-GI~vVlaTGRt~~ev~~l~~~Lgl~~-p~I~eNGA~I~~p~~ 74 (302)
T PRK12702 3 LVLSSLDGSLLDLE-----FNSYGAARQALAALERR-SIPLVLYSLRTRAQLEHLCRQLRLEH-PFICEDGSAIYVPEH 74 (302)
T ss_pred EEEEeCCCCCcCCC-----CcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCCCC-eEEEeCCcEEEEccc
Confidence 79999999999842 34788899999999999 9999999999988865544 4433 688999999987754
No 226
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.18 E-value=0.0001 Score=87.99 Aligned_cols=103 Identities=14% Similarity=0.120 Sum_probs=68.6
Q ss_pred CEEEEEEcCcc-ccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 741 QKIVLGVDRLD-YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 741 kkiIl~VdRLd-~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
..+++...|.. ..||+...++|+.++.+++|++ .++.++.|. . ..+.+ +.+.++. .+-
T Consensus 198 ~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~----~~vi~~~~~-~------~~~~~---~~~~~~~-------~~~ 256 (365)
T TIGR00236 198 RYILLTLHRRENVGEPLENIFKAIREIVEEFEDV----QIVYPVHLN-P------VVREP---LHKHLGD-------SKR 256 (365)
T ss_pred CEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCC----EEEEECCCC-h------HHHHH---HHHHhCC-------CCC
Confidence 34555555653 4589999999999999888875 344333332 1 11222 2222221 112
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 874 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~ 874 (1460)
+.+.+.++..++..+|+.||+++.+| |.+..||++| +.|+|.+..
T Consensus 257 v~~~~~~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~-----g~PvI~~~~ 301 (365)
T TIGR00236 257 VHLIEPLEYLDFLNLAANSHLILTDS-----GGVQEEAPSL-----GKPVLVLRD 301 (365)
T ss_pred EEEECCCChHHHHHHHHhCCEEEECC-----hhHHHHHHHc-----CCCEEECCC
Confidence 56678899999999999999999888 4457999999 678888643
No 227
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.18 E-value=6.1e-06 Score=88.77 Aligned_cols=109 Identities=27% Similarity=0.376 Sum_probs=79.9
Q ss_pred EEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCC
Q psy775 746 GVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC 825 (1460)
Q Consensus 746 ~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~ 825 (1460)
++||+.+.||+...++|+.++.+++|+ +.++.+|..... . . ...+..+. +...-+.+.+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~----~~~~i~G~~~~~--~----~---~~~~~~~~-------~~~~~v~~~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPD----LKLVIAGDGPER--E----Y---LEELLAAL-------LLLDRVIFLGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCC----eEEEEEeCCCCh--H----H---HHHHHHhc-------CCcccEEEeCC
Confidence 999999999999999999999888876 467767754321 1 1 11111111 11122445566
Q ss_pred C-CHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcch
Q psy775 826 I-SQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879 (1460)
Q Consensus 826 v-~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~ 879 (1460)
+ +.+++..+++.||+++.||..||++...+|||+| +.|+|+|+.+|..+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~-----g~pvi~s~~~~~~e 218 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC-----GLPVIATDVGGPPE 218 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC-----CCCEEEcCCCCcce
Confidence 6 4566666666799999999999999999999999 78999999988766
No 228
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.11 E-value=2.6e-05 Score=94.38 Aligned_cols=169 Identities=14% Similarity=0.166 Sum_probs=103.5
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEE
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 820 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv 820 (1460)
..++++.||+...||+...++++ ++..|++ .++.++.. + + ++.+++.+. .+.. .. +
T Consensus 203 ~~ilv~~G~lg~~k~~~~li~~~---~~~~~~~----~~vvv~G~---~-~---~l~~~l~~~---~~~~------~~-v 258 (391)
T PRK13608 203 QTILMSAGAFGVSKGFDTMITDI---LAKSANA----QVVMICGK---S-K---ELKRSLTAK---FKSN------EN-V 258 (391)
T ss_pred CEEEEECCCcccchhHHHHHHHH---HhcCCCc----eEEEEcCC---C-H---HHHHHHHHH---hccC------CC-e
Confidence 45667899999999999999885 4455553 45444422 1 1 222333322 2211 11 4
Q ss_pred EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhh
Q psy775 821 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIF 900 (1460)
Q Consensus 821 ~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~ 900 (1460)
.+.|.+ +++..+|+.||+++.. +.+++..||||| +.|+|++...+..+ ...+.
T Consensus 259 ~~~G~~--~~~~~~~~~aDl~I~k----~gg~tl~EA~a~-----G~PvI~~~~~pgqe---------------~~N~~- 311 (391)
T PRK13608 259 LILGYT--KHMNEWMASSQLMITK----PGGITISEGLAR-----CIPMIFLNPAPGQE---------------LENAL- 311 (391)
T ss_pred EEEecc--chHHHHHHhhhEEEeC----CchHHHHHHHHh-----CCCEEECCCCCCcc---------------hhHHH-
Confidence 456665 5789999999999863 357899999999 67888875322111 00000
Q ss_pred ccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhc
Q psy775 901 CPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVH 980 (1460)
Q Consensus 901 ~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~ 980 (1460)
|+ +-.| .++. +.|.++++++|.+.++.+...++++ +..++....+
T Consensus 312 ------------~~--------------~~~G------~g~~--~~~~~~l~~~i~~ll~~~~~~~~m~-~~~~~~~~~~ 356 (391)
T PRK13608 312 ------------YF--------------EEKG------FGKI--ADTPEEAIKIVASLTNGNEQLTNMI-STMEQDKIKY 356 (391)
T ss_pred ------------HH--------------HhCC------cEEE--eCCHHHHHHHHHHHhcCHHHHHHHH-HHHHHhcCCC
Confidence 00 0011 2233 4599999999999998765444444 4446666777
Q ss_pred CHHHHHHHHHHHHhh
Q psy775 981 DVNYWMRSFLKGMGT 995 (1460)
Q Consensus 981 ~~~~W~~~~l~~l~~ 995 (1460)
+....++.+++.+..
T Consensus 357 s~~~i~~~l~~l~~~ 371 (391)
T PRK13608 357 ATQTICRDLLDLIGH 371 (391)
T ss_pred CHHHHHHHHHHHhhh
Confidence 777777777766544
No 229
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.04 E-value=8e-05 Score=93.45 Aligned_cols=152 Identities=11% Similarity=0.121 Sum_probs=111.6
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC-C-
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN-W- 816 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~-~- 816 (1460)
.++.|.+++||| +.|-+...++|+.++++++|+. .|...|-++. . ++.+.++++++++|..++... +
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~----~L~~~gy~~~---~---~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDY----ELKILTYNND---N---DITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCe----EEEEEEecCc---h---hHHHHHHHHHHHHHhhhchhhhcc
Confidence 457777788899 9999999999999999999985 4555555421 1 235566677777766532110 0
Q ss_pred --------------------ccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCC
Q psy775 817 --------------------SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 876 (1460)
Q Consensus 817 --------------------~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG 876 (1460)
.-.+.|.|..+.+++...|.-|.++|.+|..|||+ .-+|||+. |-|.| --|
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~-----GiPqI---nyg 458 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA-----GIPQI---NKV 458 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc-----CCCee---ecC
Confidence 03577778888889999999999999999999999 99999987 44555 222
Q ss_pred cchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHH
Q psy775 877 AGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIH 956 (1460)
Q Consensus 877 ~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~ 956 (1460)
.++ +|.+. .+|++| .|.++++++|.
T Consensus 459 ~~~---------------------------------------------~V~d~--------~NG~li--~d~~~l~~al~ 483 (519)
T TIGR03713 459 ETD---------------------------------------------YVEHN--------KNGYII--DDISELLKALD 483 (519)
T ss_pred Cce---------------------------------------------eeEcC--------CCcEEe--CCHHHHHHHHH
Confidence 222 33333 345777 69999999999
Q ss_pred HHhCCCHHH
Q psy775 957 RALTMPEDE 965 (1460)
Q Consensus 957 ~aL~m~~~e 965 (1460)
..|..+...
T Consensus 484 ~~L~~~~~w 492 (519)
T TIGR03713 484 YYLDNLKNW 492 (519)
T ss_pred HHHhCHHHH
Confidence 999976443
No 230
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.03 E-value=6.3e-06 Score=93.62 Aligned_cols=74 Identities=20% Similarity=0.160 Sum_probs=59.4
Q ss_pred cEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---ccc-cceeEccCCcccccC
Q psy775 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIE-GLTYAGNHGLEIIHP 113 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~-~~~~ig~hGaei~~~ 113 (1460)
+.++|.|+||||+++.+ .+..++|.+.+++++++++ |+.+++||||++..+.... ++. ...+++.||+.+..+
T Consensus 1 ~~li~tDlDGTLl~~~~--~~~~~~~~~~~~i~~~~~~-gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~ 77 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD--GDNQALLRLNALLEDHRGE-DSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYG 77 (249)
T ss_pred CeEEEEcCCCcCcCCCC--CChHHHHHHHHHHHHhhcc-CceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeC
Confidence 46899999999998643 2356889999999999999 9999999999988887764 332 223678999999875
Q ss_pred C
Q psy775 114 D 114 (1460)
Q Consensus 114 g 114 (1460)
+
T Consensus 78 ~ 78 (249)
T TIGR01485 78 G 78 (249)
T ss_pred C
Confidence 4
No 231
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=97.98 E-value=0.00028 Score=85.51 Aligned_cols=135 Identities=15% Similarity=0.075 Sum_probs=80.6
Q ss_pred cCCeEEE--EecCccc-cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCC
Q psy775 339 TKQKIVL--GVDRLDY-TKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 415 (1460)
Q Consensus 339 ~~~kvIL--~VgRLd~-~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~ 415 (1460)
.++++|+ +.+|..+ .|+++.+++|++++.+++|+++ ++..+.+. ...+ .++++..+.+. +
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~-~~~~-------~~~~~~~~~~~-----~ 251 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF-KRRL-------QFEQIKAEYGP-----D 251 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc-hhHH-------HHHHHHHHhCC-----C
Confidence 3556554 3459888 7999999999999999888753 33333221 1111 12222222111 1
Q ss_pred cccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcC-----------------CCCch
Q psy775 416 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP-----------------FAGAG 478 (1460)
Q Consensus 416 ~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe-----------------~aGaa 478 (1460)
..+..+.+ +...+|++||++|.+| |.+.+|+|+|+. |+|++- +.+.+
T Consensus 252 -~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~-----P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ 315 (385)
T TIGR00215 252 -LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT-----PMVVGYRMKPLTFLIARRLVKTDYISLP 315 (385)
T ss_pred -CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC-----CEEEEEcCCHHHHHHHHHHHcCCeeecc
Confidence 12444423 3456899999999999 667779999954 446651 12222
Q ss_pred hcccc-c----EEECCCCHHHHHHHHHHHcCCC
Q psy775 479 EQMHE-A----LICNPYEIDAAAEVIHRALTMP 506 (1460)
Q Consensus 479 ~~L~~-a----llVNP~D~~elA~AI~~aL~m~ 506 (1460)
..+.+ + ++=+-.+++.+++++.+.|+++
T Consensus 316 nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 316 NILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 22222 1 1112246789999999999877
No 232
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.93 E-value=6.4e-06 Score=92.68 Aligned_cols=66 Identities=23% Similarity=0.192 Sum_probs=50.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc---cc-cceeEccCCcccccC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG---IE-GLTYAGNHGLEIIHP 113 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~---~~-~~~~ig~hGaei~~~ 113 (1460)
++++|+||||++ ++..+++-+ ++++ ++++ |+.++++|||++..+.+.+. +. ...++|+||+++...
T Consensus 1 li~~DlDgTLl~-----~~~~~~~~~-~~~~-~~~~-gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~ 70 (236)
T TIGR02471 1 LIITDLDNTLLG-----DDEGLASFV-ELLR-GSGD-AVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYG 70 (236)
T ss_pred CeEEeccccccC-----CHHHHHHHH-HHHH-hcCC-CceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeC
Confidence 478999999997 234566655 7776 6777 99999999999999988763 22 234789999998653
No 233
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=97.85 E-value=0.00037 Score=88.79 Aligned_cols=125 Identities=15% Similarity=0.111 Sum_probs=82.9
Q ss_pred CCCCEEEEEEcCccccCCHHHHHHHHHHHHH--hCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 738 DTKQKIVLGVDRLDYTKGLVHRLKAFETLLE--KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 738 ~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~--~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++..++..|.|+..-||..+.+.+.+++++ ++|+ ..+.+|..|.+...+.. -.++.+.+..++.+ -.|..
T Consensus 386 dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~--~pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~~-- 458 (601)
T TIGR02094 386 DPDVLTIGFARRFATYKRADLIFRDLERLARILNNPE--RPVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFRG-- 458 (601)
T ss_pred CCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCCC--
Confidence 4567789999999999999999999999986 6665 35778877776544321 12444555555442 00211
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEE-CCC-ccCCCccceeeeeeccCCCCceEEEcCCCCcc
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALV-TPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAG 878 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vv-tSl-rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~ 878 (1460)
.|+++. ..+.+-=--+|..||+++. ||. .|.-|+.=+=||. .|.|-+|-.-|..
T Consensus 459 --kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~------nGgL~~sv~DG~~ 514 (601)
T TIGR02094 459 --RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAM------NGVLNLSILDGWW 514 (601)
T ss_pred --CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHH------cCCceeecccCcc
Confidence 244444 4444444457999999999 666 8888887777765 3555666655543
No 234
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.79 E-value=0.00026 Score=84.69 Aligned_cols=103 Identities=17% Similarity=0.155 Sum_probs=64.6
Q ss_pred CCCEE-EEEE-cCccccCC-HHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKI-VLGV-DRLDYTKG-LVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kki-Il~V-dRLd~~KG-i~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++++ ++.. .|....|+ +...++|++.+.+++|++ .++.++.+ .+ .++++++++.+.. +
T Consensus 184 ~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~~----~~----~~~~~~~~~~~~~---~--- 245 (380)
T PRK00025 184 PDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLVN----PK----RREQIEEALAEYA---G--- 245 (380)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecCC----hh----hHHHHHHHHhhcC---C---
Confidence 34444 3433 46666554 688899999998888864 44444421 11 2233444433220 1
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
.. +.++. .++..+|+.||+++.+| |.+.+|+|+| +.|+|++...
T Consensus 246 ~~-v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~-----G~PvI~~~~~ 289 (380)
T PRK00025 246 LE-VTLLD-----GQKREAMAAADAALAAS-----GTVTLELALL-----KVPMVVGYKV 289 (380)
T ss_pred CC-eEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHh-----CCCEEEEEcc
Confidence 11 33332 37899999999999998 6788899999 6788887543
No 235
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=97.72 E-value=0.00022 Score=88.83 Aligned_cols=118 Identities=16% Similarity=0.203 Sum_probs=67.3
Q ss_pred HHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcc
Q psy775 830 ELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLV 909 (1460)
Q Consensus 830 el~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~ 909 (1460)
+++.+.+.+|+.|+||.+|..|.+|+|++|. +-|-|.|..+|.+.-+.
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~-----gVPsITTnLsGFG~~~~--------------------------- 509 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAF-----GVPSITTNLSGFGCWMQ--------------------------- 509 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHT-----T--EEEETTBHHHHHHH---------------------------
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhc-----CCceeeccchhHHHHHH---------------------------
Confidence 6888899999999999999999999999998 66889999999776111
Q ss_pred hhhhhhcccCCCCceeEeccccCCcccccceEEeCC-CCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHH
Q psy775 910 AKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNP-YEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRS 988 (1460)
Q Consensus 910 ~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP-~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~ 988 (1460)
+.+. ..+..|+-|++=--. |+ -.++++|+.|.....++..+|...+++..+.-..-++.+-..-
T Consensus 510 --~~~~--~~~~~GV~VvdR~~~-----------n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~y 574 (633)
T PF05693_consen 510 --EHIE--DPEEYGVYVVDRRDK-----------NYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKY 574 (633)
T ss_dssp --TTS---HHGGGTEEEE-SSSS------------HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHH
T ss_pred --Hhhc--cCcCCcEEEEeCCCC-----------CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 0000 011234444432111 11 0245666677777778887777666655544444455554444
Q ss_pred HHHHHh
Q psy775 989 FLKGMG 994 (1460)
Q Consensus 989 ~l~~l~ 994 (1460)
..+...
T Consensus 575 Y~~Ay~ 580 (633)
T PF05693_consen 575 YEKAYD 580 (633)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 236
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=97.64 E-value=9.9e-05 Score=70.83 Aligned_cols=79 Identities=25% Similarity=0.302 Sum_probs=61.8
Q ss_pred EEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc---cEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHH
Q psy775 440 VALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMNY 516 (1460)
Q Consensus 440 V~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~---allVNP~D~~elA~AI~~aL~m~~~er~~R~~~ 516 (1460)
+++-|+..+|+++..+|+||| |+++|.+...+....+.+ ++.++ |+++++++|..+|+.|.+.++...++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-----G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-----GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-----CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 456788899999999999999 666677767677777743 67777 99999999999999877666666666
Q ss_pred HHHHHhhcC
Q psy775 517 LRKREKHMN 525 (1460)
Q Consensus 517 l~~~v~~~~ 525 (1460)
......+|+
T Consensus 74 ~~~v~~~~t 82 (92)
T PF13524_consen 74 RERVLKRHT 82 (92)
T ss_pred HHHHHHhCC
Confidence 555555666
No 237
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.51 E-value=0.00014 Score=74.97 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=40.2
Q ss_pred EEEEecCCCcCCCCCCC-CCccCChhHHHHHHHHhcCCCceEEEEeCCchhhh
Q psy775 40 ALLLDYDGTLAPIAPHP-DMAVLPEETKRTLQKLANLPDVHISIISGRNVHNV 91 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p-~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l 91 (1460)
+++||+||||.....++ ....+.+.++++|++++++ |+.++++|||+....
T Consensus 3 ~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~-G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 3 RLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL-GFEIVISSSRNMRTY 54 (126)
T ss_pred EEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC-CCEEEEECCCCchhh
Confidence 68999999997532222 1245788999999999988 999999999997554
No 238
>PLN02382 probable sucrose-phosphatase
Probab=97.49 E-value=0.00018 Score=87.98 Aligned_cols=78 Identities=18% Similarity=0.121 Sum_probs=58.0
Q ss_pred hcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHH-HHHhcCCCceEEEEeCCchhhhhhhh---cc-ccceeEccCC
Q psy775 33 IGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTL-QKLANLPDVHISIISGRNVHNVMEMV---GI-EGLTYAGNHG 107 (1460)
Q Consensus 33 ~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL-~~L~~~~g~~v~IvTGR~~~~l~~~l---~~-~~~~~ig~hG 107 (1460)
+..+++++|+.|+||||++.. +...+++...+++ +++.++ |+.++++|||++..+.++. ++ .....+++||
T Consensus 4 ~~~~~~~lI~sDLDGTLL~~~---~~~~~s~~~~~~l~~~~~~~-gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nG 79 (413)
T PLN02382 4 LSGSPRLMIVSDLDHTMVDHH---DPENLSLLRFNALWEAEYRH-DSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVG 79 (413)
T ss_pred ccCCCCEEEEEcCCCcCcCCC---CccchhHHHHHHHHHHhhcC-CeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCC
Confidence 345778999999999999742 2335776777777 888888 9999999999976665543 33 2334678899
Q ss_pred cccccCC
Q psy775 108 LEIIHPD 114 (1460)
Q Consensus 108 aei~~~g 114 (1460)
++|.+.+
T Consensus 80 t~I~~~~ 86 (413)
T PLN02382 80 TEIAYGE 86 (413)
T ss_pred cEEEeCC
Confidence 9998643
No 239
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=97.42 E-value=0.00099 Score=83.14 Aligned_cols=82 Identities=13% Similarity=0.186 Sum_probs=52.6
Q ss_pred HHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc--------ccEEE-CCC--CH----HH
Q psy775 430 ELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH--------EALIC-NPY--EI----DA 494 (1460)
Q Consensus 430 eL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~--------~allV-NP~--D~----~e 494 (1460)
++..+.+.+|++|+||.||..|.+++|+.|. +.|-|.|..+|....+. .|+.| +=. +. ++
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~-----gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~ 536 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAF-----GVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQ 536 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHT-----T--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhc-----CCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHH
Confidence 4667799999999999999999999999998 55669999999875442 25544 322 33 45
Q ss_pred HHHHHHHHcCCCHHHHHHHHHH
Q psy775 495 AAEVIHRALTMPEDERTLRMNY 516 (1460)
Q Consensus 495 lA~AI~~aL~m~~~er~~R~~~ 516 (1460)
+++.|.+...++..+|....++
T Consensus 537 la~~l~~f~~~~~rqri~~Rn~ 558 (633)
T PF05693_consen 537 LADFLYKFCQLSRRQRIIQRNR 558 (633)
T ss_dssp HHHHHHHHHT--HHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHH
Confidence 6666666677776665544333
No 240
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=97.33 E-value=0.01 Score=77.63 Aligned_cols=131 Identities=17% Similarity=0.125 Sum_probs=89.1
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHH--hCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q psy775 343 IVLGVDRLDYTKGLVHRLKAFETLLE--KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 420 (1460)
Q Consensus 343 vIL~VgRLd~~KGI~~lL~Af~~lL~--~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv 420 (1460)
+|.++.|+..-|+...+++.++++.+ ++|+. .+.+|..|.+...+.. -+++.+.+.+++.. .+|. ..|+
T Consensus 480 tigfarRfa~YKR~~Lil~dl~rl~~il~~~~~--pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~----~kVv 550 (778)
T cd04299 480 TIGFARRFATYKRATLLLRDPERLKRLLNDPER--PVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFR----GRIV 550 (778)
T ss_pred EEeeeecchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCC----CcEE
Confidence 78899999999999999999999865 34442 5777777755444321 13455555555431 0221 1456
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccC--CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc---ccEEECC
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPL--RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH---EALICNP 489 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSl--rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~---~allVNP 489 (1460)
++.+ .+.+--..++..|||++.||+ +|.-|+.=.=||. .|+|-+|..-|.-.+-- .|..+.+
T Consensus 551 fle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~------NG~LnlSvlDGww~E~~~g~nGwaig~ 617 (778)
T cd04299 551 FLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL------NGGLNLSVLDGWWDEGYDGENGWAIGD 617 (778)
T ss_pred EEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH------cCCeeeecccCccccccCCCCceEeCC
Confidence 6544 444433468999999999999 8888877666665 47888898888766652 2788877
No 241
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=97.29 E-value=0.0095 Score=70.81 Aligned_cols=54 Identities=17% Similarity=0.065 Sum_probs=39.5
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCc-------c----CCCccceeeeeeccCCCCceEEEcCCCCcch
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLR-------D----GMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlr-------E----GmnLva~EymAc~~~~~~g~lIlSe~aG~~~ 879 (1460)
+.+.|.++.+|+..+|+. |+.+++.-. + .+.--..||||| |.|+|+|..++.++
T Consensus 209 V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~-----G~PVI~~~~~~~~~ 273 (333)
T PRK09814 209 ISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA-----GLPVIVWSKAAIAD 273 (333)
T ss_pred eEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHC-----CCCEEECCCccHHH
Confidence 667899999999999987 766664321 1 122226678999 78999999887666
No 242
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=97.29 E-value=0.0006 Score=65.42 Aligned_cols=92 Identities=25% Similarity=0.293 Sum_probs=66.8
Q ss_pred EEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhhhcccC
Q psy775 840 VALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQIN 919 (1460)
Q Consensus 840 v~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 919 (1460)
+++-|+..+|++...+|+||| |+++|.+..++....+.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-----G~~vi~~~~~~~~~~~~------------------------------------- 38 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-----GTPVISDDSPGLREIFE------------------------------------- 38 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-----CCeEEECChHHHHHHcC-------------------------------------
Confidence 356788889999999999999 66767666655444110
Q ss_pred CCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHhcCHHHHHHHHHH
Q psy775 920 EPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLK 991 (1460)
Q Consensus 920 ~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 991 (1460)
.| ..++.++ |+++++++|...++.|...++...++.....+.|++.+-++++++
T Consensus 39 -----------~~-----~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 39 -----------DG-----EHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred -----------CC-----CeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 01 2467777 999999999999997766666666554444458898888887763
No 243
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.24 E-value=0.00035 Score=69.52 Aligned_cols=56 Identities=25% Similarity=0.426 Sum_probs=45.0
Q ss_pred EEEEecCCCcCCCCCCC---CCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIAPHP---DMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p---~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
+++||+||||++..+.. ....+.+++.+.|++|+++ |+.++|+|||....+...+.
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~ 59 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLE 59 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHH
Confidence 47999999999854310 1236889999999999999 99999999999777766653
No 244
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=97.22 E-value=0.0016 Score=80.38 Aligned_cols=122 Identities=12% Similarity=0.237 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHH
Q psy775 357 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 436 (1460)
Q Consensus 357 ~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~ 436 (1460)
...|+|++.+.++.|++. |=+ |.++. +..++.++ . +| ..++.+ ..+....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~te--------~s~kL~~L-~----~y-----~nvvly-~~~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALTE--------MSSKLMSL-D----KY-----DNVKLY-PNITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecCc--------ccHHHHHH-H----hc-----CCcEEE-CCcChHHHHHHHH
Confidence 999999999999999974 333 43321 11233333 1 12 234555 4455567889999
Q ss_pred hccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEc--CCCCchhcccccEEECCCCHHHHHHHHHHHcCCCHH
Q psy775 437 DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVS--PFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 437 aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlS--e~aGaa~~L~~allVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
.||+++.+|..||+++...||+.. |.+|+| ...|-.+.+.++.++++.|+++++++|.++|+++..
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~------G~pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i~~lL~d~~~ 414 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY------NLLILGFEETAHNRDFIASENIFEHNEVDQLISKLKDLLNDPNQ 414 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc------CCcEEEEecccCCcccccCCceecCCCHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999985 555554 334555566678999999999999999999998753
No 245
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.21 E-value=0.00049 Score=79.72 Aligned_cols=69 Identities=14% Similarity=0.161 Sum_probs=49.1
Q ss_pred CcEEEEEecCCCcCCCCCCCCCccCC-hhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh---cccc-ceeEccCCcc
Q psy775 37 NKLALLLDYDGTLAPIAPHPDMAVLP-EETKRTLQKLANLPDVHISIISGRNVHNVMEMV---GIEG-LTYAGNHGLE 109 (1460)
Q Consensus 37 ~~~~lFfDiDGTL~~~~~~p~~a~ip-~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l---~~~~-~~~ig~hGae 109 (1460)
.+-+++||+||||+.. ....++. |++.++|.+|+++ |+.++|+|+++...+...+ ++.. +..+.++|..
T Consensus 125 ~~kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~Lkek-GikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 125 PPHVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKR-GCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred cceEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 3458999999999974 1224455 9999999999999 9999999988766655444 4432 2234444543
No 246
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=97.11 E-value=0.039 Score=72.37 Aligned_cols=125 Identities=18% Similarity=0.134 Sum_probs=82.2
Q ss_pred CCCCEEEEEEcCccccCCHHHHHHHHHHHHH--hCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 738 DTKQKIVLGVDRLDYTKGLVHRLKAFETLLE--KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 738 ~~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~--~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++.-+|.++.|+..-||..+.+..++++.+ ++|+ ..|++|..|.+...+.. -+++.+++.+++.+ -+|.
T Consensus 475 dpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~--- 546 (778)
T cd04299 475 DPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFR--- 546 (778)
T ss_pred CCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCC---
Confidence 3455588899999999999999999999865 3455 35888888876655421 12444455544430 0221
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEECCC--ccCCCccceeeeeeccCCCCceEEEcCCCCcc
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALVTPL--RDGMNLVAKEFVACQINEPPGVLIVSPFAGAG 878 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vvtSl--rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~ 878 (1460)
..|+++. ..+.+----++..|||.+.||. .|.-|+.=+=|+. +|+|-+|-.-|.-
T Consensus 547 -~kVvfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~------NG~LnlSvlDGww 603 (778)
T cd04299 547 -GRIVFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL------NGGLNLSVLDGWW 603 (778)
T ss_pred -CcEEEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH------cCCeeeecccCcc
Confidence 1345554 4444444457999999999999 7777776666554 4667777766643
No 247
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.11 E-value=0.00081 Score=73.99 Aligned_cols=74 Identities=24% Similarity=0.400 Sum_probs=59.5
Q ss_pred CCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhh---hhhhccccceeEccCCcccc
Q psy775 35 TTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNV---MEMVGIEGLTYAGNHGLEII 111 (1460)
Q Consensus 35 ~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l---~~~l~~~~~~~ig~hGaei~ 111 (1460)
..-..++|.|+||||+++.-+ ++.+...+.+|++. |+.|+.||..+..++ .+.++..+..+++.||+-|.
T Consensus 4 ~~~~~lIFtDlD~TLl~~~ye------~~pA~pv~~el~d~-G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~ 76 (274)
T COG3769 4 IQMPLLIFTDLDGTLLPHSYE------WQPAAPVLLELKDA-GVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIY 76 (274)
T ss_pred cccceEEEEcccCcccCCCCC------CCccchHHHHHHHc-CCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEE
Confidence 344568999999999984333 46678889999999 999999999986653 45567888889999999888
Q ss_pred cCCC
Q psy775 112 HPDG 115 (1460)
Q Consensus 112 ~~g~ 115 (1460)
.+.+
T Consensus 77 ~p~~ 80 (274)
T COG3769 77 LPKG 80 (274)
T ss_pred eccc
Confidence 6654
No 248
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=97.02 E-value=0.01 Score=72.20 Aligned_cols=103 Identities=17% Similarity=0.090 Sum_probs=64.8
Q ss_pred CCCEEEEE--EcCccc-cCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKIVLG--VDRLDY-TKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~--VdRLd~-~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++++|+. .+|..+ .|+++..++|++++.+++|++ .++..+.+. .. .+.++++..+.+. +
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~----~~vi~~~~~-~~-------~~~~~~~~~~~~~-----~ 251 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDL----RRVLPVVNF-KR-------RLQFEQIKAEYGP-----D 251 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCe----EEEEEeCCc-hh-------HHHHHHHHHHhCC-----C
Confidence 45555543 459887 799999999999999999975 343333221 11 1223333332221 1
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCC
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 874 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~ 874 (1460)
. .+..+.+ +...+|++||++|.+| |.+.+|+++| +.|+|++--
T Consensus 252 ~-~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~-----G~P~Vv~yk 294 (385)
T TIGR00215 252 L-QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALI-----KTPMVVGYR 294 (385)
T ss_pred C-cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHc-----CCCEEEEEc
Confidence 1 2333332 3456899999999999 6677799999 667777743
No 249
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=96.89 E-value=0.0014 Score=73.14 Aligned_cols=54 Identities=20% Similarity=0.378 Sum_probs=43.6
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHH---hcCCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVME---MVGIEG 1456 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~---~~~~~~ 1456 (1460)
++++|+||||.. + +..+++...++|++|.+. |+.+++.|||+...+.. .++++.
T Consensus 5 li~~DlDGTLl~----~-~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (230)
T PRK01158 5 AIAIDIDGTITD----K-DRRLSLKAVEAIRKAEKL-GIPVILATGNVLCFARAAAKLIGTSG 61 (230)
T ss_pred EEEEecCCCcCC----C-CCccCHHHHHHHHHHHHC-CCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 789999999994 3 335889999999999865 67999999999887764 456653
No 250
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=96.75 E-value=0.002 Score=71.51 Aligned_cols=53 Identities=23% Similarity=0.467 Sum_probs=44.2
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh---cCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM---VGIE 1455 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~---~~~~ 1455 (1460)
++++|+||||.. + +..+++...++|++|.+. ++.+++.|||+...+..+ +++.
T Consensus 3 ~v~~DlDGTLl~----~-~~~i~~~~~~~i~~l~~~-g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 3 LVAIDIDGTLTE----P-NRMISERAIEAIRKAEKK-GIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred EEEEecCCCcCC----C-CcccCHHHHHHHHHHHHC-CCEEEEEcCCcchhHHHHHHHhCCC
Confidence 689999999994 2 346999999999999775 679999999999887664 5555
No 251
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=96.69 E-value=0.0026 Score=73.95 Aligned_cols=54 Identities=17% Similarity=0.168 Sum_probs=40.9
Q ss_pred cEEEEEecCCCcCCCCCCCCCccC-ChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 38 KLALLLDYDGTLAPIAPHPDMAVL-PEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p~~a~i-p~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+-+++||+||||+.-. ...++ +|++.++|.+|+++ |++++|+|+.+...+...+
T Consensus 128 ~~~i~~D~D~TL~~~~---~~v~irdp~V~EtL~eLkek-GikLaIvTNg~Re~v~~~L 182 (303)
T PHA03398 128 PHVIVFDLDSTLITDE---EPVRIRDPFVYDSLDELKER-GCVLVLWSYGNREHVVHSL 182 (303)
T ss_pred ccEEEEecCCCccCCC---CccccCChhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHH
Confidence 3489999999999731 12223 59999999999999 9999999966555544444
No 252
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.57 E-value=0.0044 Score=70.56 Aligned_cols=58 Identities=14% Similarity=0.208 Sum_probs=42.7
Q ss_pred HHHhhcCCCcEEEEEecCCCcCCCCCC--CCCccCCh---------------------------hHHHHHHHHhcCCCce
Q psy775 29 LSKYIGTTNKLALLLDYDGTLAPIAPH--PDMAVLPE---------------------------ETKRTLQKLANLPDVH 79 (1460)
Q Consensus 29 ~~~~~~~~~~~~lFfDiDGTL~~~~~~--p~~a~ip~---------------------------s~~~aL~~L~~~~g~~ 79 (1460)
+++.+...++.+|+||+||||++-.+. ......++ .+++.|+.++++ |++
T Consensus 54 ~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~-G~~ 132 (237)
T TIGR01672 54 IENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRR-GDA 132 (237)
T ss_pred HHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHC-CCE
Confidence 355566566779999999999986551 11111122 288999999999 999
Q ss_pred EEEEeCCc
Q psy775 80 ISIISGRN 87 (1460)
Q Consensus 80 v~IvTGR~ 87 (1460)
+++||+|.
T Consensus 133 i~iVTnr~ 140 (237)
T TIGR01672 133 IFFVTGRT 140 (237)
T ss_pred EEEEeCCC
Confidence 99999993
No 253
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=96.56 E-value=0.0017 Score=68.96 Aligned_cols=54 Identities=20% Similarity=0.265 Sum_probs=37.9
Q ss_pred EEEEecCCCcCCCC----CC---CCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIA----PH---PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~----~~---p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
++|||+||||++.. .. +..-.+.++ .+|++|+++ |++++|+||++...+...+.
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~i~~Lk~~-G~~i~IvTn~~~~~~~~~l~ 63 (154)
T TIGR01670 3 LLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YGIRCALKS-GIEVAIITGRKAKLVEDRCK 63 (154)
T ss_pred EEEEeCceeEEcCeEEECCCCcEEEEEechhH--HHHHHHHHC-CCEEEEEECCCCHHHHHHHH
Confidence 78999999999721 11 000112222 389999999 99999999999777666553
No 254
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.47 E-value=0.0029 Score=64.74 Aligned_cols=47 Identities=26% Similarity=0.400 Sum_probs=38.3
Q ss_pred EEEEecCCCcCCCC---CCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIA---PHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~---~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
+++||+||||.+-. ..-....+.+++.++|+.|+++ |+.++|+|+++
T Consensus 2 ~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~-g~~l~i~Sn~~ 51 (132)
T TIGR01662 2 GVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA-GYKVVIVTNQS 51 (132)
T ss_pred EEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC-CCEEEEEECCc
Confidence 68999999999521 1112356789999999999998 99999999988
No 255
>PLN02423 phosphomannomutase
Probab=96.46 E-value=0.0054 Score=70.12 Aligned_cols=58 Identities=22% Similarity=0.433 Sum_probs=47.1
Q ss_pred cCCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCC
Q psy775 1391 GTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE 1455 (1460)
Q Consensus 1391 ~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~ 1455 (1460)
++..+.++|+|+||||.. ++ -.+++.+.+++++|.+. +.+++.|||+...+...++..
T Consensus 3 ~~~~~~i~~~D~DGTLl~----~~-~~i~~~~~~ai~~l~~~--i~fviaTGR~~~~~~~~~~~~ 60 (245)
T PLN02423 3 ARKPGVIALFDVDGTLTA----PR-KEATPEMLEFMKELRKV--VTVGVVGGSDLSKISEQLGKT 60 (245)
T ss_pred CCccceEEEEeccCCCcC----CC-CcCCHHHHHHHHHHHhC--CEEEEECCcCHHHHHHHhccc
Confidence 345677888999999983 22 35789999999999976 799999999999998777653
No 256
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.40 E-value=0.0025 Score=68.83 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=39.7
Q ss_pred EEEEecCCCcCC---CCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAP---IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~---~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++|||.||||+. ...++++..+.|++.++|++|+++ |++++|+|.-+
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~i~TN~~ 52 (176)
T TIGR00213 3 AIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM-GYALVLVTNQS 52 (176)
T ss_pred EEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 799999999994 223445677889999999999999 99999999865
No 257
>PLN02645 phosphoglycolate phosphatase
Probab=96.35 E-value=0.0056 Score=72.36 Aligned_cols=61 Identities=21% Similarity=0.329 Sum_probs=47.2
Q ss_pred cCCCChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 17 KGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
+.+.+.+++.+.+.+ .. ++|||+||||..- . .+.|++.++|++|+++ |.+++++|+|+...
T Consensus 13 ~~~~~~~~~~~~~~~-~~-----~~~~D~DGtl~~~-----~-~~~~ga~e~l~~lr~~-g~~~~~~TN~~~~~ 73 (311)
T PLN02645 13 AQLLTLENADELIDS-VE-----TFIFDCDGVIWKG-----D-KLIEGVPETLDMLRSM-GKKLVFVTNNSTKS 73 (311)
T ss_pred cccCCHHHHHHHHHh-CC-----EEEEeCcCCeEeC-----C-ccCcCHHHHHHHHHHC-CCEEEEEeCCCCCC
Confidence 344566677666655 22 7999999999852 2 3568999999999999 99999999998443
No 258
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.32 E-value=0.0026 Score=72.72 Aligned_cols=70 Identities=20% Similarity=0.229 Sum_probs=45.0
Q ss_pred CcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc----cccceeEccCCccccc
Q psy775 37 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG----IEGLTYAGNHGLEIIH 112 (1460)
Q Consensus 37 ~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~----~~~~~~ig~hGaei~~ 112 (1460)
++.+++.|+||||++ ..........+.++ .+...+..++++|||+++.+.+.+. +.+..+||++|.++.+
T Consensus 1 ~~~ll~sDlD~Tl~~-----~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~ 74 (247)
T PF05116_consen 1 PPRLLASDLDGTLID-----GDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYY 74 (247)
T ss_dssp -SEEEEEETBTTTBH-----CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEE
T ss_pred CCEEEEEECCCCCcC-----CCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEE
Confidence 367899999999992 11111223333333 2235589999999999999877663 2345688999999887
No 259
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=96.31 E-value=0.006 Score=70.24 Aligned_cols=49 Identities=35% Similarity=0.525 Sum_probs=42.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
++++|+||||.. ++ -.+++..+++|++|.++ |+.+++.|||+...+..+
T Consensus 4 li~~DlDGTLl~----~~-~~i~~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~ 52 (272)
T PRK15126 4 LAAFDMDGTLLM----PD-HHLGEKTLSTLARLRER-DITLTFATGRHVLEMQHI 52 (272)
T ss_pred EEEEeCCCcCcC----CC-CcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHH
Confidence 789999999994 33 36999999999999886 679999999999997766
No 260
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=96.22 E-value=0.0052 Score=70.32 Aligned_cols=49 Identities=27% Similarity=0.474 Sum_probs=40.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeC---Cchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISG---RNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTG---R~~~~l~~~l 95 (1460)
.++||+||||.. ....+| ++.++|++|+++ |.+++++|| |+...+.+.+
T Consensus 3 ~~~~D~DGtl~~-----~~~~i~-~a~~~l~~l~~~-g~~~~~~Tnn~~r~~~~~~~~l 54 (249)
T TIGR01457 3 GYLIDLDGTMYK-----GKERIP-EAETFVHELQKR-DIPYLFVTNNSTRTPESVAEML 54 (249)
T ss_pred EEEEeCCCceEc-----CCeeCc-CHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHH
Confidence 688999999996 223455 899999999999 999999996 8887766655
No 261
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.22 E-value=0.0044 Score=71.30 Aligned_cols=48 Identities=17% Similarity=0.303 Sum_probs=37.9
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
+++||+||||..-.. ....+.|++.++|++|+++ |++++++|||+...
T Consensus 3 ~i~~D~DGtl~~~~~--~~~~~~~~a~~al~~l~~~-G~~~~~~Tn~~~~~ 50 (257)
T TIGR01458 3 GVLLDISGVLYISDA--KSGVAVPGSQEAVKRLRGA-SVKVRFVTNTTKES 50 (257)
T ss_pred EEEEeCCCeEEeCCC--cccCcCCCHHHHHHHHHHC-CCeEEEEECCCCCC
Confidence 689999999985311 0012677999999999999 99999999987554
No 262
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.20 E-value=0.0072 Score=62.26 Aligned_cols=55 Identities=22% Similarity=0.202 Sum_probs=41.3
Q ss_pred EEEEecCCCcCCCCCCCCCc-------cCChhHHHHHHHHhcCCCceEEEEeCC-chhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMA-------VLPEETKRTLQKLANLPDVHISIISGR-NVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a-------~ip~s~~~aL~~L~~~~g~~v~IvTGR-~~~~l~~~l 95 (1460)
+++||+||||++.-.+.... .+.+++.+.|+.|+++ |++++|+|++ +.......+
T Consensus 2 li~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~-g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 2 VIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN-GFLLALASYNDDPHVAYELL 64 (128)
T ss_pred EEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC-CeEEEEEeCCCCHHHHHHHH
Confidence 68899999999862111111 2578999999999999 9999999999 655544444
No 263
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=96.18 E-value=0.0056 Score=60.81 Aligned_cols=57 Identities=25% Similarity=0.403 Sum_probs=46.4
Q ss_pred EEEEecCCCCCCCCCC---CCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCC
Q psy775 1397 ALLLDYDGTLAPIAPH---PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 1454 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~---P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~ 1454 (1460)
+++||+||||.+-... +....+.+++.+.|++|.+. +..++|+|||....+...+..
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHH
Confidence 4789999999875432 34568899999999999987 578999999998888876543
No 264
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=96.18 E-value=0.0075 Score=69.16 Aligned_cols=49 Identities=22% Similarity=0.365 Sum_probs=41.7
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
++++|+||||.. + ...+++...++|++|.+. |+.+++.|||+...+...
T Consensus 5 li~~DlDGTLl~----~-~~~i~~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~ 53 (270)
T PRK10513 5 LIAIDMDGTLLL----P-DHTISPAVKQAIAAARAK-GVNVVLTTGRPYAGVHRY 53 (270)
T ss_pred EEEEecCCcCcC----C-CCccCHHHHHHHHHHHHC-CCEEEEecCCChHHHHHH
Confidence 789999999994 2 246899999999999876 679999999999987654
No 265
>PRK10976 putative hydrolase; Provisional
Probab=96.16 E-value=0.0078 Score=68.92 Aligned_cols=49 Identities=33% Similarity=0.483 Sum_probs=41.4
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
++++|+||||.. ++ -.+++...++|+++.+. |+.+++.|||+...+..+
T Consensus 4 li~~DlDGTLl~----~~-~~is~~~~~ai~~l~~~-G~~~~iaTGR~~~~~~~~ 52 (266)
T PRK10976 4 VVASDLDGTLLS----PD-HTLSPYAKETLKLLTAR-GIHFVFATGRHHVDVGQI 52 (266)
T ss_pred EEEEeCCCCCcC----CC-CcCCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHH
Confidence 789999999993 33 36899999999999876 679999999999987654
No 266
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=96.12 E-value=0.0075 Score=68.71 Aligned_cols=58 Identities=22% Similarity=0.223 Sum_probs=47.1
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh---cCCC
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM---VGIE 1455 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~---~~~~ 1455 (1460)
++++++|+||||.+-. +.+ -.++|.+.++++++.++ ++.++++|||+...++++ ++++
T Consensus 1 ~~li~tDlDGTLl~~~-~~~-~~~~~~~~~~i~~~~~~-gi~fv~aTGR~~~~~~~~~~~~~~~ 61 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHT-DGD-NQALLRLNALLEDHRGE-DSLLVYSTGRSPHSYKELQKQKPLL 61 (249)
T ss_pred CeEEEEcCCCcCcCCC-CCC-hHHHHHHHHHHHHhhcc-CceEEEEcCCCHHHHHHHHhcCCCC
Confidence 4689999999999864 233 55779999999998876 468999999999999888 5554
No 267
>PTZ00174 phosphomannomutase; Provisional
Probab=96.08 E-value=0.0096 Score=67.97 Aligned_cols=52 Identities=35% Similarity=0.551 Sum_probs=44.9
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 1454 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~ 1454 (1460)
++++|+||||.. . +-.+++..+++|+++.+. |+.+++.|||+...+...++.
T Consensus 7 lia~DlDGTLL~----~-~~~is~~~~~ai~~l~~~-Gi~~viaTGR~~~~i~~~l~~ 58 (247)
T PTZ00174 7 ILLFDVDGTLTK----P-RNPITQEMKDTLAKLKSK-GFKIGVVGGSDYPKIKEQLGE 58 (247)
T ss_pred EEEEECcCCCcC----C-CCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHhh
Confidence 799999999982 2 246888999999999887 689999999999999998874
No 268
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.07 E-value=0.0099 Score=64.11 Aligned_cols=47 Identities=26% Similarity=0.270 Sum_probs=35.9
Q ss_pred EEEEecCCCcCCCCC------CCCCcc-CChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIAP------HPDMAV-LPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~------~p~~a~-ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++|||.||||+.... +|++-+ +-|++.++|++|+++ |++++|+|..+
T Consensus 15 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~TN~~ 68 (166)
T TIGR01664 15 VAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE-GYKIVIFTNQS 68 (166)
T ss_pred EEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 688899999996321 222222 348999999999999 99999999754
No 269
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=95.92 E-value=0.012 Score=67.55 Aligned_cols=51 Identities=29% Similarity=0.491 Sum_probs=42.8
Q ss_pred EEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1396 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1396 ~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
-++++|+||||..=. ..+++.+.++|+++.+. ++.++++|||+...++..+
T Consensus 4 kli~~DlDGTLl~~~-----~~i~~~~~~al~~~~~~-g~~v~iaTGR~~~~~~~~~ 54 (264)
T COG0561 4 KLLAFDLDGTLLDSN-----KTISPETKEALARLREK-GVKVVLATGRPLPDVLSIL 54 (264)
T ss_pred eEEEEcCCCCccCCC-----CccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHH
Confidence 379999999998532 22999999999988665 6899999999999888776
No 270
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=95.87 E-value=0.012 Score=67.46 Aligned_cols=49 Identities=24% Similarity=0.435 Sum_probs=40.8
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
++++|+||||.. ++ -.+++...++|+++.+. |+.+++.|||+...+...
T Consensus 5 li~~DlDGTLl~----~~-~~i~~~~~~ai~~~~~~-G~~~~iaTGR~~~~~~~~ 53 (272)
T PRK10530 5 VIALDLDGTLLT----PK-KTILPESLEALARAREA-GYKVIIVTGRHHVAIHPF 53 (272)
T ss_pred EEEEeCCCceEC----CC-CccCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHH
Confidence 789999999983 22 35888999999999887 679999999998876654
No 271
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=95.86 E-value=0.067 Score=66.33 Aligned_cols=122 Identities=12% Similarity=0.236 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHHHHHHHH
Q psy775 757 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 836 (1460)
Q Consensus 757 ~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~eel~Aly~ 836 (1460)
...++|++++.+..|++ .|=. |.++. +..++.++ .+ | .-++.+. .+....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~----~f~I-ga~te--------~s~kL~~L-~~----y-----~nvvly~-~~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDY----HFHI-AALTE--------MSSKLMSL-DK----Y-----DNVKLYP-NITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCc----EEEE-EecCc--------ccHHHHHH-Hh----c-----CCcEEEC-CcChHHHHHHHH
Confidence 89999999999999995 3433 54432 22445444 22 2 1234444 555667889999
Q ss_pred HccEEEECCCccCCCccceeeeeeccCCCCceEEEcC-CC-CcchhhhhhhhcCcccchhhhhhhhccccCCCcchhhhh
Q psy775 837 DAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP-FA-GAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFV 914 (1460)
Q Consensus 837 ~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe-~a-G~~~~L~~~l~vnP~~~~~~~~~~~~~~~g~~~~~~~~~ 914 (1460)
.||+++.+|..||+++...||+.. |.+|+|= .+ |..+
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~------G~pI~afd~t~~~~~----------------------------------- 385 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY------NLLILGFEETAHNRD----------------------------------- 385 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc------CCcEEEEecccCCcc-----------------------------------
Confidence 999999999999999999999875 4444442 11 1111
Q ss_pred hcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHH
Q psy775 915 ACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 964 (1460)
Q Consensus 915 ~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~ 964 (1460)
+. ..+.++++.|+++++++|.++|+.+..
T Consensus 386 ---------------~i------~~g~l~~~~~~~~m~~~i~~lL~d~~~ 414 (438)
T TIGR02919 386 ---------------FI------ASENIFEHNEVDQLISKLKDLLNDPNQ 414 (438)
T ss_pred ---------------cc------cCCceecCCCHHHHHHHHHHHhcCHHH
Confidence 11 124689999999999999999998754
No 272
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=95.84 E-value=0.37 Score=58.66 Aligned_cols=218 Identities=18% Similarity=0.154 Sum_probs=129.0
Q ss_pred CcHHHHhhhcc-CceeeeccHHhHHHHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc-
Q psy775 261 WSDEILQGMLG-CDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID- 338 (1460)
Q Consensus 261 ~r~eil~gLL~-aDlIgF~t~~yar~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~- 338 (1460)
.+..+.+.|+. .|+|--|+..++..|.+ ||... +..-| ..|..+.|.-.+.... ...+.
T Consensus 166 k~~~~~~~~~~~i~li~aQse~D~~Rf~~-----LGa~~------v~v~G-NlKfd~~~~~~~~~~~-------~~~r~~ 226 (419)
T COG1519 166 KLKFLARLLFKNIDLILAQSEEDAQRFRS-----LGAKP------VVVTG-NLKFDIEPPPQLAAEL-------AALRRQ 226 (419)
T ss_pred HHHHHHHHHHHhcceeeecCHHHHHHHHh-----cCCcc------eEEec-ceeecCCCChhhHHHH-------HHHHHh
Confidence 34566666554 59999999999999998 55432 11111 1222222221111111 11111
Q ss_pred -cC-CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCc
Q psy775 339 -TK-QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416 (1460)
Q Consensus 339 -~~-~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~ 416 (1460)
++ +++++..+. ...--.-.++++..+++++|+. ++ |.+|- .+ +=-+.+++++.+.+-+++.-..
T Consensus 227 l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~-----ll-IlVPR---Hp---ERf~~v~~l~~~~gl~~~~rS~ 292 (419)
T COG1519 227 LGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNL-----LL-ILVPR---HP---ERFKAVENLLKRKGLSVTRRSQ 292 (419)
T ss_pred cCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCc-----eE-EEecC---Ch---hhHHHHHHHHHHcCCeEEeecC
Confidence 33 888888888 3334445889999999999985 22 22231 12 2235677777777765532111
Q ss_pred -------ccEEEEcCCCCHHHHHHHHHhccEEEEccC---CCCCCcceeeeeeeccCCCCCeEEEcCC----CCchhcc-
Q psy775 417 -------SPIRYIYGCISQDELASFYRDAAVALVTPL---RDGMNLVAKEFVACQINEPPGVLIVSPF----AGAGEQM- 481 (1460)
Q Consensus 417 -------~pIv~~~g~v~~eeL~aLY~aADV~VvpSl---rEGfnLValEamAcq~~~~~GvlVlSe~----aGaa~~L- 481 (1460)
++|... -+.-||..+|+.||++.+--. .-|-| ++|+.+| +.|+|...+ .-+++.+
T Consensus 293 ~~~~~~~tdV~l~---DtmGEL~l~y~~adiAFVGGSlv~~GGHN--~LEpa~~-----~~pvi~Gp~~~Nf~ei~~~l~ 362 (419)
T COG1519 293 GDPPFSDTDVLLG---DTMGELGLLYGIADIAFVGGSLVPIGGHN--PLEPAAF-----GTPVIFGPYTFNFSDIAERLL 362 (419)
T ss_pred CCCCCCCCcEEEE---ecHhHHHHHHhhccEEEECCcccCCCCCC--hhhHHHc-----CCCEEeCCccccHHHHHHHHH
Confidence 233322 256899999999999987543 33555 6899998 455565444 3344444
Q ss_pred --cccEEECCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhc
Q psy775 482 --HEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHM 524 (1460)
Q Consensus 482 --~~allVNP~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~ 524 (1460)
++++.|+. .+.+++++...++. +++|+...+.....+..+
T Consensus 363 ~~ga~~~v~~--~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 363 QAGAGLQVED--ADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred hcCCeEEECC--HHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 23777865 78888888888876 555555555555555543
No 273
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.78 E-value=0.016 Score=66.96 Aligned_cols=56 Identities=20% Similarity=0.349 Sum_probs=44.9
Q ss_pred CcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh---cCCC
Q psy775 1394 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM---VGIE 1455 (1460)
Q Consensus 1394 ~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~---~~~~ 1455 (1460)
+.-++|+|+||||.. ++ -.+++...++|++|.+. |+.+++.|||+...+... +|++
T Consensus 6 ~~~lI~~DlDGTLL~----~~-~~i~~~~~~ai~~l~~~-Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 6 DPLLIFTDLDGTLLD----SH-TYDWQPAAPWLTRLREA-QVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CCeEEEEeCccCCcC----CC-CcCcHHHHHHHHHHHHc-CCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 456899999999973 32 35788899999999876 789999999999887754 5554
No 274
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=95.77 E-value=1.5 Score=53.56 Aligned_cols=164 Identities=20% Similarity=0.142 Sum_probs=102.0
Q ss_pred CEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCC----
Q psy775 741 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW---- 816 (1460)
Q Consensus 741 kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~---- 816 (1460)
+++++..+. ...--.-.+.|+..+++++|+. ..|.+|. . + +=-+.+++++.+.|-+++....
T Consensus 231 r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~------llIlVPR-H--p---ERf~~v~~l~~~~gl~~~~rS~~~~~ 296 (419)
T COG1519 231 RPVWVAAST--HEGEEEIILDAHQALKKQFPNL------LLILVPR-H--P---ERFKAVENLLKRKGLSVTRRSQGDPP 296 (419)
T ss_pred CceEEEecC--CCchHHHHHHHHHHHHhhCCCc------eEEEecC-C--h---hhHHHHHHHHHHcCCeEEeecCCCCC
Confidence 788888777 3333344788999999999985 2233442 1 1 2235678888888766543222
Q ss_pred ---ccEEEEcCCCCHHHHHHHHHHccEEEECCC---ccCCCccceeeeeeccCCCCceEEEcCCCCcchhhhhhhhcCcc
Q psy775 817 ---SPIRYIYGCISQDELASFYRDAAVALVTPL---RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY 890 (1460)
Q Consensus 817 ---~pvv~~~g~v~~eel~Aly~~ADv~vvtSl---rEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vnP~ 890 (1460)
++|.... +.-|+..+|++||+++|--. ..|-| ++|..++ +.|+|.-.+.-.-
T Consensus 297 ~~~tdV~l~D---tmGEL~l~y~~adiAFVGGSlv~~GGHN--~LEpa~~-----~~pvi~Gp~~~Nf------------ 354 (419)
T COG1519 297 FSDTDVLLGD---TMGELGLLYGIADIAFVGGSLVPIGGHN--PLEPAAF-----GTPVIFGPYTFNF------------ 354 (419)
T ss_pred CCCCcEEEEe---cHhHHHHHHhhccEEEECCcccCCCCCC--hhhHHHc-----CCCEEeCCccccH------------
Confidence 2344333 67799999999999988643 34444 6899888 5566655544211
Q ss_pred cchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCCCHHHHHHHH
Q psy775 891 EIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRM 970 (1460)
Q Consensus 891 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m~~~er~~r~ 970 (1460)
.++++.+ . .-.+++.|+. .+.++.+++..++. +++|+...
T Consensus 355 --~ei~~~l--------------~---------------------~~ga~~~v~~--~~~l~~~v~~l~~~-~~~r~~~~ 394 (419)
T COG1519 355 --SDIAERL--------------L---------------------QAGAGLQVED--ADLLAKAVELLLAD-EDKREAYG 394 (419)
T ss_pred --HHHHHHH--------------H---------------------hcCCeEEECC--HHHHHHHHHHhcCC-HHHHHHHH
Confidence 1222221 1 1135677874 88888888777776 66666665
Q ss_pred HHHHhHHHhc
Q psy775 971 NYLRKREKVH 980 (1460)
Q Consensus 971 ~~~~~~v~~~ 980 (1460)
+...+.+..+
T Consensus 395 ~~~~~~v~~~ 404 (419)
T COG1519 395 RAGLEFLAQN 404 (419)
T ss_pred HHHHHHHHHh
Confidence 6666666655
No 275
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.75 E-value=0.018 Score=65.71 Aligned_cols=57 Identities=19% Similarity=0.268 Sum_probs=42.5
Q ss_pred HHhhcCCCcEEEEEecCCCcCCCCCC-----------------------------CCCccCChhHHHHHHHHhcCCCceE
Q psy775 30 SKYIGTTNKLALLLDYDGTLAPIAPH-----------------------------PDMAVLPEETKRTLQKLANLPDVHI 80 (1460)
Q Consensus 30 ~~~~~~~~~~~lFfDiDGTL~~~~~~-----------------------------p~~a~ip~s~~~aL~~L~~~~g~~v 80 (1460)
++.+...++.++.||||||+++-.+. -..+.+-+++++.|+.|+++ |+.+
T Consensus 55 ~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~-G~~I 133 (237)
T PRK11009 55 EKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKR-GDSI 133 (237)
T ss_pred hhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHC-CCeE
Confidence 44445455779999999999962210 11234556699999999999 9999
Q ss_pred EEEeCCc
Q psy775 81 SIISGRN 87 (1460)
Q Consensus 81 ~IvTGR~ 87 (1460)
+++|||+
T Consensus 134 ~iVTnR~ 140 (237)
T PRK11009 134 YFITGRT 140 (237)
T ss_pred EEEeCCC
Confidence 9999996
No 276
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.69 E-value=0.0091 Score=62.74 Aligned_cols=47 Identities=21% Similarity=0.253 Sum_probs=38.3
Q ss_pred EEEEecCCCcCCCCCCC-----CCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIAPHP-----DMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p-----~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++|||+||||++..... ....+-|++.++|+.|+++ |+.++|+|+.+
T Consensus 2 ~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~-g~~~~I~Sn~~ 53 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA-GYTVVVVTNQS 53 (147)
T ss_pred eEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC-CCEEEEEeCCC
Confidence 78999999999864311 1234678999999999999 99999999865
No 277
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=95.48 E-value=0.025 Score=58.55 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=39.3
Q ss_pred EEEEecCCCCCCCCCCC-CCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHH
Q psy775 1397 ALLLDYDGTLAPIAPHP-DMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM 1449 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P-~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~ 1449 (1460)
++++|+||||..-...| ....+.+++.++|+++.+. +..+.++|||+.....
T Consensus 3 ~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~-G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 3 RLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL-GFEIVISSSRNMRTYE 55 (126)
T ss_pred EEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC-CCEEEEECCCCchhhh
Confidence 68999999996322122 2356888999999999664 5689999999987654
No 278
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.42 E-value=0.023 Score=65.75 Aligned_cols=50 Identities=20% Similarity=0.234 Sum_probs=40.6
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++|+|.||||.. ++ ..+++...++|++|.+. ++.++++|||+...+..++
T Consensus 6 li~~DlDGTLl~----~~-~~~~~~~~~ai~~l~~~-Gi~~~iaTgR~~~~~~~~~ 55 (273)
T PRK00192 6 LVFTDLDGTLLD----HH-TYSYEPAKPALKALKEK-GIPVIPCTSKTAAEVEVLR 55 (273)
T ss_pred EEEEcCcccCcC----CC-CcCcHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHH
Confidence 789999999984 22 35678899999999876 6799999999988866544
No 279
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=95.41 E-value=0.011 Score=64.50 Aligned_cols=58 Identities=19% Similarity=0.177 Sum_probs=41.1
Q ss_pred cEEEEEecCCCcCCCC--CCCCCccCChhHH---HHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 38 KLALLLDYDGTLAPIA--PHPDMAVLPEETK---RTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~--~~p~~a~ip~s~~---~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
--+++||+||||++-. ..+....+..-.. .+++.|+++ |+.++|+|||+...+...+.
T Consensus 21 ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~-Gi~v~I~T~~~~~~v~~~l~ 83 (183)
T PRK09484 21 IRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTS-GIEVAIITGRKSKLVEDRMT 83 (183)
T ss_pred ceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHC-CCEEEEEeCCCcHHHHHHHH
Confidence 4489999999999731 1111222333333 799999988 99999999999877766654
No 280
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.34 E-value=0.018 Score=67.02 Aligned_cols=43 Identities=16% Similarity=0.202 Sum_probs=35.6
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVH 89 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~ 89 (1460)
+++||+||||..- . .+.+++.++|++|+++ |.+++++|||+..
T Consensus 4 ~~~~D~DGtl~~~-----~-~~~~ga~e~l~~L~~~-g~~~~~~Tnns~~ 46 (279)
T TIGR01452 4 GFIFDCDGVLWLG-----E-RVVPGAPELLDRLARA-GKAALFVTNNSTK 46 (279)
T ss_pred EEEEeCCCceEcC-----C-eeCcCHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 6889999999862 2 2455699999999999 9999999998743
No 281
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.31 E-value=0.015 Score=62.54 Aligned_cols=47 Identities=21% Similarity=0.302 Sum_probs=38.1
Q ss_pred EEEEEecCCCcCCCCC------CCCCccCChhHHHHHHHHhcCCCceEEEEeCC
Q psy775 39 LALLLDYDGTLAPIAP------HPDMAVLPEETKRTLQKLANLPDVHISIISGR 86 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~------~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR 86 (1460)
.++|||.||||....+ .++...+-|++.++|++|+++ |++++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA-GYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC-CCeEEEEeCC
Confidence 3899999999988432 223445668999999999999 9999999985
No 282
>PRK10444 UMP phosphatase; Provisional
Probab=95.30 E-value=0.019 Score=65.86 Aligned_cols=45 Identities=13% Similarity=0.196 Sum_probs=38.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNV 91 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l 91 (1460)
+++||+||||..- . .+.|++.++|++|+++ |.+++++|||+....
T Consensus 3 ~v~~DlDGtL~~~-----~-~~~p~a~~~l~~L~~~-g~~~~~~Tn~~~~~~ 47 (248)
T PRK10444 3 NVICDIDGVLMHD-----N-VAVPGAAEFLHRILDK-GLPLVLLTNYPSQTG 47 (248)
T ss_pred EEEEeCCCceEeC-----C-eeCccHHHHHHHHHHC-CCeEEEEeCCCCCCH
Confidence 6889999999862 2 4678999999999999 999999999986443
No 283
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.15 E-value=0.02 Score=61.44 Aligned_cols=46 Identities=26% Similarity=0.452 Sum_probs=34.4
Q ss_pred EEEEecCCCcCCCCC------CCCC-ccCChhHHHHHHHHhcCCCceEEEEeCC
Q psy775 40 ALLLDYDGTLAPIAP------HPDM-AVLPEETKRTLQKLANLPDVHISIISGR 86 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~------~p~~-a~ip~s~~~aL~~L~~~~g~~v~IvTGR 86 (1460)
++|||.||||+.-.. +|++ ..+++++.++|++|.++ |+.++|+|.-
T Consensus 2 ia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~-Gy~IvIvTNQ 54 (159)
T PF08645_consen 2 IAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK-GYKIVIVTNQ 54 (159)
T ss_dssp EEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT-TEEEEEEEE-
T ss_pred EEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc-CCeEEEEeCc
Confidence 689999999986432 3444 34677899999999999 9999999953
No 284
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.09 E-value=0.032 Score=59.76 Aligned_cols=51 Identities=16% Similarity=0.220 Sum_probs=39.7
Q ss_pred EEEEecCCCCCCCC------CCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhH
Q psy775 1397 ALLLDYDGTLAPIA------PHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNV 1448 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~------~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l 1448 (1460)
++++|+||||+.-. +--...+++|.+.++++++.+. +..+.++|||+...+
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~-G~~ivy~TGRp~~~~ 57 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN-GYKILYLTARPIGQA 57 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc-CCeEEEEcCCcHHHH
Confidence 37899999999531 1111147899999999999886 579999999998766
No 285
>KOG3189|consensus
Probab=94.86 E-value=0.036 Score=60.52 Aligned_cols=81 Identities=23% Similarity=0.231 Sum_probs=62.9
Q ss_pred hcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccc----cceeEccCCc
Q psy775 33 IGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE----GLTYAGNHGL 108 (1460)
Q Consensus 33 ~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~----~~~~ig~hGa 108 (1460)
.++.++.++.||.||||++ ....++|++.+.|++|+++ +.+.++-|-+++.+.+.++.. .+.....||.
T Consensus 6 ~~r~~~~l~lfdvdgtLt~-----~r~~~~~e~~~~l~~lr~~--v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl 78 (252)
T KOG3189|consen 6 AARDEETLCLFDVDGTLTP-----PRQKVTPEMLEFLQKLRKK--VTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGL 78 (252)
T ss_pred hhcCCceEEEEecCCcccc-----ccccCCHHHHHHHHHHhhh--eEEEEeecHHHHHHHHHhchhHHhhhcccccCCCe
Confidence 3445678999999999996 4567999999999999988 788999998888887777532 2233578999
Q ss_pred ccccCCCCcccc
Q psy775 109 EIIHPDGSRFVH 120 (1460)
Q Consensus 109 ei~~~g~~i~~~ 120 (1460)
.-...|+..-++
T Consensus 79 ~~yk~gk~~~~Q 90 (252)
T KOG3189|consen 79 VAYKGGKLLSKQ 90 (252)
T ss_pred eEeeCCcchhHH
Confidence 888777654443
No 286
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.85 E-value=0.026 Score=56.04 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=33.3
Q ss_pred EEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 41 LLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 41 lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++||+||||.. ...+-|++.++|++|+++ |.+++++|..+
T Consensus 1 ~l~D~dGvl~~------g~~~ipga~e~l~~L~~~-g~~~~~lTNns 40 (101)
T PF13344_consen 1 FLFDLDGVLYN------GNEPIPGAVEALDALRER-GKPVVFLTNNS 40 (101)
T ss_dssp EEEESTTTSEE------TTEE-TTHHHHHHHHHHT-TSEEEEEES-S
T ss_pred CEEeCccEeEe------CCCcCcCHHHHHHHHHHc-CCCEEEEeCCC
Confidence 58999999985 234678999999999999 99999999875
No 287
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.84 E-value=0.03 Score=59.89 Aligned_cols=52 Identities=17% Similarity=0.210 Sum_probs=42.0
Q ss_pred EEEEecCCCcCCC------CCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhh
Q psy775 40 ALLLDYDGTLAPI------APHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM 92 (1460)
Q Consensus 40 ~lFfDiDGTL~~~------~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~ 92 (1460)
++++|||||++.- .+.-......+++.+..++++++ |+++.-+|+|+..+..
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~-GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN-GYKILYLTARPIGQAN 58 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC-CeEEEEECcCcHHHHH
Confidence 4899999999874 22223336789999999999999 9999999999976643
No 288
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=94.74 E-value=0.041 Score=56.27 Aligned_cols=47 Identities=26% Similarity=0.422 Sum_probs=37.6
Q ss_pred EEEEecCCCCCC---CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAP---IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLap---i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
+++||.||||.. .+..=....+.|++.++|+.|.+. +..++|+|+++
T Consensus 2 ~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~-g~~l~i~Sn~~ 51 (132)
T TIGR01662 2 GVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA-GYKVVIVTNQS 51 (132)
T ss_pred EEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC-CCEEEEEECCc
Confidence 689999999994 222122467889999999999765 67999999998
No 289
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=94.69 E-value=0.059 Score=62.94 Aligned_cols=57 Identities=21% Similarity=0.224 Sum_probs=45.1
Q ss_pred cEEEEEecCCCcCCCCCCC----C---CccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 38 KLALLLDYDGTLAPIAPHP----D---MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~~p----~---~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.-++++|+||||.....+. . ...+.+++.++|++|+++ |+.++++|||+.......+
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~i~T~r~~~~~~~~l 221 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA-GYEIIVVSGRDGVCEEDTV 221 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC-CCEEEEEeCCChhhHHHHH
Confidence 4588899999999865421 1 456789999999999999 9999999999876654444
No 290
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.43 E-value=0.067 Score=62.57 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=42.4
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHH---HhcCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM---EMVGIE 1455 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~---~~~~~~ 1455 (1460)
++|+|+||||..-. ...++.+.++|++|.++ +++|++.|||+..++. +.+++.
T Consensus 3 LIftDLDGTLLd~~-----~~~~~~a~~aL~~Lk~~-GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 3 LVLSSLDGSLLDLE-----FNSYGAARQALAALERR-SIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred EEEEeCCCCCcCCC-----CcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 68999999998632 24667799999999987 7899999999998854 445554
No 291
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.32 E-value=0.058 Score=62.61 Aligned_cols=54 Identities=26% Similarity=0.268 Sum_probs=42.1
Q ss_pred CCcEEEEEecCCCcCCCCCC---------C------------CCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 36 TNKLALLLDYDGTLAPIAPH---------P------------DMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~---------p------------~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
.++.+++||||+|+++..+. + ..+.+-|++.+.|+.|+++ |+.++++|||+...
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~-G~~v~iVTnR~~~~ 147 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK-GVKIFYVSNRSEKE 147 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCeEEEEeCCCcch
Confidence 56789999999999875421 1 1234558899999999999 99999999998443
No 292
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.26 E-value=0.082 Score=60.02 Aligned_cols=54 Identities=28% Similarity=0.274 Sum_probs=43.7
Q ss_pred CCcEEEEEecCCCcCCCCC---------------------CCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 36 TNKLALLLDYDGTLAPIAP---------------------HPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~---------------------~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
..+.++.||||-|+++-.+ ....+..-|+++++++.|+++ |+.|+++|||+...
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~-G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIEL-GIKIFLLSGRWEEL 149 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHC-CCEEEEEcCCChHH
Confidence 4678999999999998331 123566778999999999999 99999999998544
No 293
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.20 E-value=0.1 Score=56.41 Aligned_cols=44 Identities=20% Similarity=0.195 Sum_probs=38.6
Q ss_pred EEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 39 LALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
-++++|+||||.+. ....+.+++.++|+.|+++ |++++|+|+.+
T Consensus 26 ~~vv~D~Dgtl~~~----~~~~~~pgv~e~L~~Lk~~-g~~l~I~Sn~~ 69 (170)
T TIGR01668 26 KGVVLDKDNTLVYP----DHNEAYPALRDWIEELKAA-GRKLLIVSNNA 69 (170)
T ss_pred CEEEEecCCccccC----CCCCcChhHHHHHHHHHHc-CCEEEEEeCCc
Confidence 48999999999974 3346889999999999999 99999999987
No 294
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=94.08 E-value=0.059 Score=61.23 Aligned_cols=48 Identities=19% Similarity=0.216 Sum_probs=39.0
Q ss_pred EEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEe---CCchhhhhhhh
Q psy775 41 LLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEMV 95 (1460)
Q Consensus 41 lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvT---GR~~~~l~~~l 95 (1460)
++||+||||.+- . .+.+++.++|+.++++ |.++.++| ||+..++.+.+
T Consensus 1 ~lfD~DGvL~~~-----~-~~~~~a~e~i~~l~~~-g~~~~~~tN~~~~~~~~~~~~l 51 (236)
T TIGR01460 1 FLFDIDGVLWLG-----H-KPIPGAAEALNRLRAK-GKPVVFLTNNSSRSEEDYAEKL 51 (236)
T ss_pred CEEeCcCccCcC-----C-ccCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHH
Confidence 479999999862 2 2355999999999999 99999998 89887765554
No 295
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=94.04 E-value=0.086 Score=66.55 Aligned_cols=51 Identities=22% Similarity=0.243 Sum_probs=39.6
Q ss_pred CCcEEEEEecCCCcCCCC------CCCCCcc-CChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 36 TNKLALLLDYDGTLAPIA------PHPDMAV-LPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~------~~p~~a~-ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++.-++|||.||||..-. .+|++-. +.|++.++|++|.++ |++++|+|..+
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~-Gy~IvIvTNQ~ 223 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD-GFKICIFTNQG 223 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC-CCEEEEEECCc
Confidence 334589999999999632 2233333 579999999999999 99999999854
No 296
>PRK06769 hypothetical protein; Validated
Probab=93.93 E-value=0.053 Score=58.76 Aligned_cols=47 Identities=30% Similarity=0.333 Sum_probs=38.8
Q ss_pred EEEEecCCCcCCCCC--CCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIAP--HPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~--~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++|+|-||||...+. +++...+-|++++.|++|+++ |++++|+|+.+
T Consensus 6 ~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~Tn~~ 54 (173)
T PRK06769 6 AIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN-HIKIFSFTNQP 54 (173)
T ss_pred EEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEECCc
Confidence 899999999976522 223556779999999999999 99999999965
No 297
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=93.91 E-value=0.036 Score=63.56 Aligned_cols=53 Identities=21% Similarity=0.321 Sum_probs=35.7
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcC
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~ 1453 (1460)
+.++++|+||||. +.+......+.+.++ .....++.++++|||+++.+.+.+.
T Consensus 2 ~~ll~sDlD~Tl~-----~~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~ 54 (247)
T PF05116_consen 2 PRLLASDLDGTLI-----DGDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLR 54 (247)
T ss_dssp SEEEEEETBTTTB-----HCHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHH
T ss_pred CEEEEEECCCCCc-----CCCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHH
Confidence 5689999999999 111222334444444 3447788999999999999998765
No 298
>PLN02887 hydrolase family protein
Probab=93.80 E-value=0.09 Score=67.21 Aligned_cols=50 Identities=22% Similarity=0.417 Sum_probs=42.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++++|+||||.. . +-.+++...++|+++.+. |+.+++.|||+...+...+
T Consensus 310 LIa~DLDGTLLn----~-d~~Is~~t~eAI~kl~ek-Gi~~vIATGR~~~~i~~~l 359 (580)
T PLN02887 310 YIFCDMDGTLLN----S-KSQISETNAKALKEALSR-GVKVVIATGKARPAVIDIL 359 (580)
T ss_pred EEEEeCCCCCCC----C-CCccCHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHH
Confidence 799999999983 2 346899999999999886 6799999999998876544
No 299
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=93.78 E-value=0.051 Score=58.77 Aligned_cols=47 Identities=19% Similarity=0.333 Sum_probs=40.1
Q ss_pred EEEEecCCCCC---CCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLA---PIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLa---pi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
++|||.||||. +.+.++++..+.|++.++|+.|.+. +.+++|+|.-+
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~i~TN~~ 52 (176)
T TIGR00213 3 AIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM-GYALVLVTNQS 52 (176)
T ss_pred EEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 79999999998 3445677888899999999999875 67999999766
No 300
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.75 E-value=0.075 Score=64.03 Aligned_cols=47 Identities=21% Similarity=0.277 Sum_probs=40.7
Q ss_pred EEEEEecCCCcCCC------CCCCCCccCChhHHHHHHHHhcCCCceEEEEeCC
Q psy775 39 LALLLDYDGTLAPI------APHPDMAVLPEETKRTLQKLANLPDVHISIISGR 86 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~------~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR 86 (1460)
-++|||.||||+.. ...++...+.|++.++|..|+++ |++++|+|+.
T Consensus 3 k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~-G~kL~IvTNq 55 (354)
T PRK05446 3 KILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA-GYKLVMVTNQ 55 (354)
T ss_pred cEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC-CCeEEEEECC
Confidence 48999999999985 33455678899999999999998 9999999985
No 301
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=93.67 E-value=0.11 Score=60.87 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=42.3
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCC-hhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLP-EETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~-~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
+-+++||+||||..= ...+++. |++.++|++|.++ |+++||+|+++.+.+.+.+
T Consensus 126 ~kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~Lkek-GikLaIaTS~~Re~v~~~L 180 (301)
T TIGR01684 126 PHVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKR-GCILVLWSYGDRDHVVESM 180 (301)
T ss_pred ceEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHH
Confidence 348999999999754 2245555 9999999999987 6799999988877665443
No 302
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=93.34 E-value=0.076 Score=57.61 Aligned_cols=47 Identities=17% Similarity=0.309 Sum_probs=38.4
Q ss_pred EEEEecCCCcCCCC----CCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIA----PHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~----~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
++|||-||||.-.. .......+-|++.++|++|+++ |++++|+|+.+
T Consensus 5 ~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-g~~l~I~Tn~~ 55 (181)
T PRK08942 5 AIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA-GYRVVVATNQS 55 (181)
T ss_pred EEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 79999999996543 2233455778999999999999 99999999875
No 303
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=93.31 E-value=0.16 Score=58.11 Aligned_cols=80 Identities=15% Similarity=0.226 Sum_probs=54.0
Q ss_pred CCCChhhHHHHHHHhhcCCCcEEEEEecCCCCCCCCC---------CCC--------------------CcCCChhHHHH
Q psy775 1375 QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAP---------HPD--------------------MAVLPEETKRT 1425 (1460)
Q Consensus 1375 ~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~---------~P~--------------------~a~~~~~~~~~ 1425 (1460)
.|-+--+.+++-..+ ...++++++||+||||..=.+ +|+ .+.+-+.+.+.
T Consensus 44 ~~~~~~~~~~~~~~~-~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~el 122 (237)
T TIGR01672 44 APIHWISVAQIENSL-EGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQL 122 (237)
T ss_pred CCeeEEEHHHHHHhc-CCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHH
Confidence 444555666655553 455678999999999987333 221 11233348888
Q ss_pred HHHHhcCCCceEEEEcCC-------ChhhHHHhcCCCC
Q psy775 1426 LQKLANLPDVHISIISGR-------NVHNVMEMVGIEG 1456 (1460)
Q Consensus 1426 L~~La~~~~~~vAvvSGR-------~~~~l~~~~~~~~ 1456 (1460)
|+.+.++ |..++|||+| ....+.+.+|++.
T Consensus 123 L~~l~~~-G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~ 159 (237)
T TIGR01672 123 IDMHQRR-GDAIFFVTGRTPGKTDTVSKTLAKNFHIPA 159 (237)
T ss_pred HHHHHHC-CCEEEEEeCCCCCcCHHHHHHHHHHhCCch
Confidence 9999876 6799999999 3456666777764
No 304
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=93.24 E-value=8.1 Score=46.93 Aligned_cols=91 Identities=15% Similarity=0.168 Sum_probs=57.0
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhc----c---cccEEECC--CC
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQ----M---HEALICNP--YE 491 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~----L---~~allVNP--~D 491 (1460)
.+.+.+++.+ ++..||++|.. -|.| +..|+++++ .|+|+.-..+-... + +-|..++. .+
T Consensus 278 ~~~~~~p~~~---ll~~~~~~I~h---gG~~-t~~Eal~~G-----~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~ 345 (392)
T TIGR01426 278 EVRQWVPQLE---ILKKADAFITH---GGMN-STMEALFNG-----VPMVAVPQGADQPMTARRIAELGLGRHLPPEEVT 345 (392)
T ss_pred EEeCCCCHHH---HHhhCCEEEEC---CCch-HHHHHHHhC-----CCEEecCCcccHHHHHHHHHHCCCEEEeccccCC
Confidence 3457888754 58899998864 4666 669999994 44455444332211 2 22666654 45
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 492 IDAAAEVIHRALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 492 ~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
.++++++|.++|..+. .+.+.+.+.+.+....
T Consensus 346 ~~~l~~ai~~~l~~~~--~~~~~~~l~~~~~~~~ 377 (392)
T TIGR01426 346 AEKLREAVLAVLSDPR--YAERLRKMRAEIREAG 377 (392)
T ss_pred HHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHcC
Confidence 7899999999998653 3334455555554433
No 305
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=93.04 E-value=0.038 Score=62.74 Aligned_cols=54 Identities=19% Similarity=0.178 Sum_probs=41.3
Q ss_pred CCcEEEEEecCCCcCCCCCC---------------------CCCccCChhHHHHHHHHhcCCCceEEEEeCCchhh
Q psy775 36 TNKLALLLDYDGTLAPIAPH---------------------PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 90 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~---------------------p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~ 90 (1460)
.++.+++||||+|+++-... ...+..-|++++.++.++++ |+.|+++|||+-..
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~-G~~V~~iT~R~~~~ 144 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR-GVKVFFITGRPESQ 144 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT-TEEEEEEEEEETTC
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC-CCeEEEEecCCchh
Confidence 56889999999998763221 11124445688999999999 99999999998653
No 306
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=93.02 E-value=0.17 Score=52.09 Aligned_cols=55 Identities=24% Similarity=0.257 Sum_probs=40.1
Q ss_pred EEEEecCCCCCCCC---CCCCCc----CCChhHHHHHHHHhcCCCceEEEEcCC-ChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIA---PHPDMA----VLPEETKRTLQKLANLPDVHISIISGR-NVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~---~~P~~a----~~~~~~~~~L~~La~~~~~~vAvvSGR-~~~~l~~~~ 1452 (1460)
++++|+||||.+-- -.++.. .+.+++.+.|+.|.++ +.+++|+|++ +...+...+
T Consensus 2 li~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~-g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 2 VIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN-GFLLALASYNDDPHVAYELL 64 (128)
T ss_pred EEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC-CeEEEEEeCCCCHHHHHHHH
Confidence 68899999999652 121111 3678999999999775 5799999999 665554443
No 307
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=92.87 E-value=0.27 Score=63.43 Aligned_cols=51 Identities=18% Similarity=0.122 Sum_probs=40.4
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
+-++|+|+||||..- +. ..++...++|++|.++ ++++++.|||+...+..+
T Consensus 416 ~KLIfsDLDGTLLd~----d~-~i~~~t~eAL~~L~ek-GI~~VIATGRs~~~i~~l 466 (694)
T PRK14502 416 KKIVYTDLDGTLLNP----LT-YSYSTALDALRLLKDK-ELPLVFCSAKTMGEQDLY 466 (694)
T ss_pred eeEEEEECcCCCcCC----CC-ccCHHHHHHHHHHHHc-CCeEEEEeCCCHHHHHHH
Confidence 348999999999852 22 4556789999999876 689999999999876644
No 308
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=92.77 E-value=0.14 Score=53.82 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=38.7
Q ss_pred EEEEecCCCCCCC-----CCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAPI-----APHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLapi-----~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
+++||.||||..= ...++...+.|++.++|+.|.++ +..++|+|..+
T Consensus 2 ~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~-g~~~~I~Sn~~ 53 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA-GYTVVVVTNQS 53 (147)
T ss_pred eEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC-CCEEEEEeCCC
Confidence 6899999999873 34455567889999999999876 67999999865
No 309
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=92.59 E-value=0.17 Score=57.68 Aligned_cols=42 Identities=17% Similarity=0.129 Sum_probs=36.1
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCch
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNV 88 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~ 88 (1460)
+++||+||||..- ..+.|++.++|++|+++ |++++++|+.+.
T Consensus 10 ~~~~D~dG~l~~~------~~~~pga~e~L~~L~~~-G~~~~ivTN~~~ 51 (242)
T TIGR01459 10 VFLLDLWGVIIDG------NHTYPGAVQNLNKIIAQ-GKPVYFVSNSPR 51 (242)
T ss_pred EEEEecccccccC------CccCccHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 6889999999852 34679999999999999 999999988653
No 310
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=92.53 E-value=1.5 Score=54.70 Aligned_cols=101 Identities=13% Similarity=0.103 Sum_probs=58.8
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+..++.+..++.++ -+.-++.+.++|++-|+. +|+....+.. . ++.+.+.+.+- |- .-.-
T Consensus 283 ~d~vvF~~fn~~~KI--~p~~l~~W~~IL~~vP~S----~L~L~~~~~~--~------~~~l~~~~~~~----Gv-~~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKI--SPETLDLWARILKAVPNS----RLWLLRFPAS--G------EARLRRRFAAH----GV-DPDR 343 (468)
T ss_dssp SSSEEEEE-S-GGG----HHHHHHHHHHHHHSTTE----EEEEEETSTT--H------HHHHHHHHHHT----TS--GGG
T ss_pred CCceEEEecCccccC--CHHHHHHHHHHHHhCCCc----EEEEeeCCHH--H------HHHHHHHHHHc----CC-Chhh
Confidence 567777777877654 688899999999999985 3444444431 1 12233333322 21 1123
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeee
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 860 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc 860 (1460)
++ |.+..+.+|..+.|+.+||++.|..+-| +.+.+||+..
T Consensus 344 i~-f~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm 383 (468)
T PF13844_consen 344 II-FSPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM 383 (468)
T ss_dssp EE-EEE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH
T ss_pred EE-EcCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc
Confidence 44 4557788999999999999999998877 5677899887
No 311
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=92.15 E-value=0.18 Score=53.76 Aligned_cols=57 Identities=23% Similarity=0.249 Sum_probs=38.2
Q ss_pred EEEEecCCCcCCCCCCCCC-----ccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcc
Q psy775 40 ALLLDYDGTLAPIAPHPDM-----AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 97 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~-----a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~ 97 (1460)
+++||+||||++-.-+-+. ....---=-.|+.|.+. |+.++|+|||....+..+..-
T Consensus 10 Lli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~-Gi~vAIITGr~s~ive~Ra~~ 71 (170)
T COG1778 10 LLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKS-GIKVAIITGRDSPIVEKRAKD 71 (170)
T ss_pred EEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHc-CCeEEEEeCCCCHHHHHHHHH
Confidence 7899999999983221110 00011112467888887 999999999998777777643
No 312
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=92.06 E-value=0.13 Score=54.61 Aligned_cols=53 Identities=21% Similarity=0.313 Sum_probs=35.8
Q ss_pred EEEEecCCCCCC----CCCCC---CCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAP----IAPHP---DMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLap----i~~~P---~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++|||.||||.. +..+. ..-...++ .+|++|.++ ++.++|+||++...+.+.+
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~i~~Lk~~-G~~i~IvTn~~~~~~~~~l 62 (154)
T TIGR01670 3 LLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YGIRCALKS-GIEVAIITGRKAKLVEDRC 62 (154)
T ss_pred EEEEeCceeEEcCeEEECCCCcEEEEEechhH--HHHHHHHHC-CCEEEEEECCCCHHHHHHH
Confidence 689999999997 33331 11112222 278999775 5799999999976665544
No 313
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=91.74 E-value=0.18 Score=54.88 Aligned_cols=60 Identities=13% Similarity=0.124 Sum_probs=43.0
Q ss_pred EEEEecCCCcCCC-----CCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccc
Q psy775 40 ALLLDYDGTLAPI-----APHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGL 100 (1460)
Q Consensus 40 ~lFfDiDGTL~~~-----~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~ 100 (1460)
+++||+||+|++= ....+.....-.--.+|+.|+++ |++++|+|+++...+...+...++
T Consensus 9 ~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~-Gi~laIiT~k~~~~~~~~l~~lgi 73 (169)
T TIGR02726 9 LVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLC-GIDVAIITSKKSGAVRHRAEELKI 73 (169)
T ss_pred EEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHC-CCEEEEEECCCcHHHHHHHHHCCC
Confidence 7899999999983 11111223344457899999999 999999999987777666644333
No 314
>PLN02382 probable sucrose-phosphatase
Probab=91.70 E-value=0.34 Score=59.85 Aligned_cols=61 Identities=18% Similarity=0.113 Sum_probs=41.0
Q ss_pred cCCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHH-HHHhcCCCceEEEEcCCChhhHHH---hcCCC
Q psy775 1391 GTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTL-QKLANLPDVHISIISGRNVHNVME---MVGIE 1455 (1460)
Q Consensus 1391 ~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L-~~La~~~~~~vAvvSGR~~~~l~~---~~~~~ 1455 (1460)
..++++++++|+||||.+=. +...+++....++ +++.++ ++.+++.|||+...+.+ .++++
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~---~~~~~s~~~~~~l~~~~~~~-gi~fv~aTGR~~~~~~~l~~~~~l~ 69 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHH---DPENLSLLRFNALWEAEYRH-DSLLVFSTGRSPTLYKELRKEKPLL 69 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCC---CccchhHHHHHHHHHHhhcC-CeeEEEEcCCCHHHHHHHHHhCCCC
Confidence 45779999999999999531 1224554444444 766654 67899999999555554 45543
No 315
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=90.52 E-value=0.38 Score=52.01 Aligned_cols=47 Identities=26% Similarity=0.286 Sum_probs=36.2
Q ss_pred EEEEecCCCCCC------CCCCCCCcC-CChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAP------IAPHPDMAV-LPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLap------i~~~P~~a~-~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
.+++|.||||.. ...+|++.. +-|++.++|++|.+. +..++|+|..+
T Consensus 15 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~TN~~ 68 (166)
T TIGR01664 15 VAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE-GYKIVIFTNQS 68 (166)
T ss_pred EEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 577799999986 233566555 569999999999765 67999999644
No 316
>PRK06769 hypothetical protein; Validated
Probab=90.51 E-value=0.35 Score=52.46 Aligned_cols=47 Identities=30% Similarity=0.314 Sum_probs=38.6
Q ss_pred EEEEecCCCCCCC--CCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAPI--APHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLapi--~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
++++|-||||.+- ...++...+-|++.+.|+.|.+. +.+++|+|+.+
T Consensus 6 ~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~Tn~~ 54 (173)
T PRK06769 6 AIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN-HIKIFSFTNQP 54 (173)
T ss_pred EEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEECCc
Confidence 7999999999754 23345677889999999999876 67999999876
No 317
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=90.43 E-value=0.53 Score=55.07 Aligned_cols=55 Identities=20% Similarity=0.181 Sum_probs=44.9
Q ss_pred cEEEEEecCCCCCCCCC----CCC---CcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHH
Q psy775 1395 KLALLLDYDGTLAPIAP----HPD---MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVME 1450 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~----~P~---~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~ 1450 (1460)
.-++.+|.||||..... ++. +..+.+++.++|++|.++ +..++|+|||+......
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~i~T~r~~~~~~~ 219 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA-GYEIIVVSGRDGVCEED 219 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC-CCEEEEEeCCChhhHHH
Confidence 45788999999999876 333 567889999999999876 67999999999876543
No 318
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=90.28 E-value=0.31 Score=53.55 Aligned_cols=33 Identities=36% Similarity=0.532 Sum_probs=28.0
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLP 1433 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~ 1433 (1460)
++++||||||++ |+...+++.+.++|++|.+..
T Consensus 1 li~~D~DgTL~~----~~~~~~~~~~~~~l~~l~~~g 33 (204)
T TIGR01484 1 LLFFDLDGTLLD----PNAHELSPETIEALERLREAG 33 (204)
T ss_pred CEEEeCcCCCcC----CCCCcCCHHHHHHHHHHHHCC
Confidence 478999999997 333678999999999999875
No 319
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=90.14 E-value=0.2 Score=54.79 Aligned_cols=57 Identities=19% Similarity=0.181 Sum_probs=37.4
Q ss_pred cEEEEEecCCCCCCC--CCCCCCcCCChhHH---HHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1395 KLALLLDYDGTLAPI--APHPDMAVLPEETK---RTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi--~~~P~~a~~~~~~~---~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
--++++|+||||..= -..++...+.+..+ .+++.|.++ ++.++|+|||+...+..++
T Consensus 21 ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~-Gi~v~I~T~~~~~~v~~~l 82 (183)
T PRK09484 21 IRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTS-GIEVAIITGRKSKLVEDRM 82 (183)
T ss_pred ceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHC-CCEEEEEeCCCcHHHHHHH
Confidence 337899999999962 12222233333333 567777654 6799999999987766653
No 320
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=89.83 E-value=0.28 Score=52.85 Aligned_cols=46 Identities=20% Similarity=0.268 Sum_probs=37.9
Q ss_pred EEEEecCCCCCC------CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCC
Q psy775 1397 ALLLDYDGTLAP------IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGR 1443 (1460)
Q Consensus 1397 ~l~lD~DGTLap------i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR 1443 (1460)
++|||.||||.. ....|+...+-|++.++|+.|.++ +.+++|+|-.
T Consensus 3 ~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-g~~l~IvSN~ 54 (161)
T TIGR01261 3 ILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA-GYKFVMVTNQ 54 (161)
T ss_pred EEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC-CCeEEEEeCC
Confidence 789999999987 234455667889999999999876 5689999975
No 321
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=89.70 E-value=0.44 Score=51.83 Aligned_cols=71 Identities=25% Similarity=0.320 Sum_probs=50.0
Q ss_pred cccccccCC--CChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCc-eEEEEeCC
Q psy775 11 NELFILKGM--GTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDV-HISIISGR 86 (1460)
Q Consensus 11 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~-~v~IvTGR 86 (1460)
+.....||. .++.+++-....|.. ..=-++.||.|.||++ |....++++..+.++++++..+. .|+|+|.-
T Consensus 13 ~p~l~~P~l~V~si~~I~~~~~~Lk~-~Gik~li~DkDNTL~~----~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNs 86 (168)
T PF09419_consen 13 NPSLLLPHLYVPSIRDIDFEANHLKK-KGIKALIFDKDNTLTP----PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNS 86 (168)
T ss_pred CccccCCCEEcCChhhCCcchhhhhh-cCceEEEEcCCCCCCC----CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 334556766 566666522211222 2233899999999997 56678999999999999998543 69999985
No 322
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=89.27 E-value=0.84 Score=53.11 Aligned_cols=52 Identities=29% Similarity=0.322 Sum_probs=40.2
Q ss_pred CCcEEEEEecCCCcCCC---------CCCC-------------CCccCChhHHHHHHHHhcCCCceEEEEeCCch
Q psy775 36 TNKLALLLDYDGTLAPI---------APHP-------------DMAVLPEETKRTLQKLANLPDVHISIISGRNV 88 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~---------~~~p-------------~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~ 88 (1460)
..+-++.||||+|+++- ...+ ..+..-|++++..+.++++ |+.|+++|||+-
T Consensus 99 ~~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~-G~kIf~VSgR~e 172 (275)
T TIGR01680 99 HEKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSL-GFKIIFLSGRLK 172 (275)
T ss_pred CCCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHC-CCEEEEEeCCch
Confidence 45679999999999941 1011 1455567899999999999 999999999984
No 323
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=89.13 E-value=4.7 Score=49.63 Aligned_cols=138 Identities=20% Similarity=0.272 Sum_probs=79.2
Q ss_pred EEEEecC-ccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhc---------ccC
Q psy775 343 IVLGVDR-LDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRING---------RFT 412 (1460)
Q Consensus 343 vIL~VgR-Ld~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~---------~fg 412 (1460)
+++.-.| =+-.++++..++|++++.++ |+ +.++....+.. .++.+++.+... .++. .|.
T Consensus 209 llLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~~----~~~~~~~~l~~~--g~~~~~~~~~~~~~~~ 277 (396)
T TIGR03492 209 ALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPSL----SLEKLQAILEDL--GWQLEGSSEDQTSLFQ 277 (396)
T ss_pred EEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCCC----CHHHHHHHHHhc--CceecCCccccchhhc
Confidence 3455566 44557889999999998655 44 44554443332 223333333211 0000 000
Q ss_pred CCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCc------hhc----cc
Q psy775 413 TPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGA------GEQ----MH 482 (1460)
Q Consensus 413 ~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGa------a~~----L~ 482 (1460)
. ..+.+. ....++..+|++||++|..| |.+..|+++++.| .|+--+.+. .+. ++
T Consensus 278 ~---~~~~v~---~~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P-----~Ilip~~~~q~na~~~~~~~~l~g 341 (396)
T TIGR03492 278 K---GTLEVL---LGRGAFAEILHWADLGIAMA-----GTATEQAVGLGKP-----VIQLPGKGPQFTYGFAEAQSRLLG 341 (396)
T ss_pred c---CceEEE---echHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCC-----EEEEeCCCCHHHHHHHHhhHhhcC
Confidence 0 112222 12466889999999999986 3556999998544 344432121 111 13
Q ss_pred ccEEECCCCHHHHHHHHHHHcCCCH
Q psy775 483 EALICNPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 483 ~allVNP~D~~elA~AI~~aL~m~~ 507 (1460)
+++.+...+++.+++++.++|++++
T Consensus 342 ~~~~l~~~~~~~l~~~l~~ll~d~~ 366 (396)
T TIGR03492 342 GSVFLASKNPEQAAQVVRQLLADPE 366 (396)
T ss_pred CEEecCCCCHHHHHHHHHHHHcCHH
Confidence 5666666788999999999998643
No 324
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=88.69 E-value=0.7 Score=54.33 Aligned_cols=53 Identities=17% Similarity=0.155 Sum_probs=39.3
Q ss_pred EEEEEecCCCCCCCCCCCCCcCC-ChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1396 LALLLDYDGTLAPIAPHPDMAVL-PEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1396 ~~l~lD~DGTLapi~~~P~~a~~-~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
-++++|+||||..=.. .+++ +|++.++|++|.+. |+.+||+|+.+.+.+...+
T Consensus 129 ~~i~~D~D~TL~~~~~---~v~irdp~V~EtL~eLkek-GikLaIvTNg~Re~v~~~L 182 (303)
T PHA03398 129 HVIVFDLDSTLITDEE---PVRIRDPFVYDSLDELKER-GCVLVLWSYGNREHVVHSL 182 (303)
T ss_pred cEEEEecCCCccCCCC---ccccCChhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHH
Confidence 3789999999976422 2333 48999999999986 5799999976665544443
No 325
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=88.27 E-value=0.94 Score=51.93 Aligned_cols=79 Identities=18% Similarity=0.253 Sum_probs=52.3
Q ss_pred CCCChhhHHHHHHHhhcCCCcEEEEEecCCCCC---CC--------CCC------------------CCCcCCChhHHHH
Q psy775 1375 QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLA---PI--------APH------------------PDMAVLPEETKRT 1425 (1460)
Q Consensus 1375 ~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLa---pi--------~~~------------------P~~a~~~~~~~~~ 1425 (1460)
.|-+--+++++-..+ ...+++++.+|+|||+. |. .+. =..+.+-+++++.
T Consensus 44 ~~~~~~~~~~~~~~~-~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~el 122 (237)
T PRK11009 44 APVHWVSVAQIEKSL-EGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQL 122 (237)
T ss_pred CCeeEEEHHHhhhhc-cCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHH
Confidence 334444555554443 44457799999999999 41 000 0135566779999
Q ss_pred HHHHhcCCCceEEEEcCCC-------hhhHHHhcCCC
Q psy775 1426 LQKLANLPDVHISIISGRN-------VHNVMEMVGIE 1455 (1460)
Q Consensus 1426 L~~La~~~~~~vAvvSGR~-------~~~l~~~~~~~ 1455 (1460)
|+.|.++ +..+++||||+ ...+.+.+|+|
T Consensus 123 L~~L~~~-G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 123 IDMHVKR-GDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred HHHHHHC-CCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 9999765 57999999996 34555566773
No 326
>KOG3189|consensus
Probab=87.68 E-value=0.95 Score=49.93 Aligned_cols=58 Identities=28% Similarity=0.367 Sum_probs=49.1
Q ss_pred cCCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCCC
Q psy775 1391 GTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE 1455 (1460)
Q Consensus 1391 ~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~~ 1455 (1460)
++.++.++.+|.||||+|- ...++|++.+.|+.|-.+. .+.+|-|-+++.+.+-+|.+
T Consensus 7 ~r~~~~l~lfdvdgtLt~~-----r~~~~~e~~~~l~~lr~~v--~ig~VggsDl~k~~eqlG~~ 64 (252)
T KOG3189|consen 7 ARDEETLCLFDVDGTLTPP-----RQKVTPEMLEFLQKLRKKV--TIGFVGGSDLSKQQEQLGDN 64 (252)
T ss_pred hcCCceEEEEecCCccccc-----cccCCHHHHHHHHHHhhhe--EEEEeecHHHHHHHHHhchh
Confidence 3456788999999999863 5778999999999998875 78999999999999888643
No 327
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=87.55 E-value=0.89 Score=50.40 Aligned_cols=13 Identities=38% Similarity=0.593 Sum_probs=10.6
Q ss_pred EEEEecCCCcCCC
Q psy775 40 ALLLDYDGTLAPI 52 (1460)
Q Consensus 40 ~lFfDiDGTL~~~ 52 (1460)
+++||+||||++.
T Consensus 4 ~viFDlDGTL~ds 16 (221)
T TIGR02253 4 AIFFDLDDTLIDT 16 (221)
T ss_pred EEEEeCCCCCcCC
Confidence 6789999998873
No 328
>KOG2941|consensus
Probab=87.47 E-value=6.7 Score=46.96 Aligned_cols=137 Identities=12% Similarity=0.221 Sum_probs=93.9
Q ss_pred cCCeEEEEecCccccCCHHHHHHHHHHHHHh-------CCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhccc
Q psy775 339 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEK-------HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRF 411 (1460)
Q Consensus 339 ~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~-------~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~f 411 (1460)
...+++++--.+.|-..+.-+|+|...+-++ +|. ++ .+|. |.+|..+.+.++|++.
T Consensus 253 ~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----ll-ciIT----GKGPlkE~Y~~~I~~~-------- 315 (444)
T KOG2941|consen 253 ERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----LL-CIIT----GKGPLKEKYSQEIHEK-------- 315 (444)
T ss_pred CCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----EE-EEEc----CCCchhHHHHHHHHHh--------
Confidence 4467889999999999999999999855221 233 22 2233 3445555566665542
Q ss_pred CCCCcccEEEEcCCCCHHHHHHHHHhccEEEE--ccCCCCCCccee--eeeeeccCCCCCeEEEcCCCCchhcc-c---c
Q psy775 412 TTPNWSPIRYIYGCISQDELASFYRDAAVALV--TPLRDGMNLVAK--EFVACQINEPPGVLIVSPFAGAGEQM-H---E 483 (1460)
Q Consensus 412 g~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vv--pSlrEGfnLVal--EamAcq~~~~~GvlVlSe~aGaa~~L-~---~ 483 (1460)
+|..|.+..-.+.-++++.++..||..|+ || .-|.-|+.+ .-..| +-|+++-.|. +..+| . .
T Consensus 316 ---~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtS-SSGLDLPMKVVDMFGc-----glPvcA~~fk-cl~ELVkh~eN 385 (444)
T KOG2941|consen 316 ---NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTS-SSGLDLPMKVVDMFGC-----GLPVCAVNFK-CLDELVKHGEN 385 (444)
T ss_pred ---cccceeeeecccccccchhHhhccccceEeeec-CcccCcchhHHHhhcC-----CCceeeecch-hHHHHHhcCCC
Confidence 46678888888999999999999998774 33 346655543 33345 3344555664 55555 2 3
Q ss_pred cEEECCCCHHHHHHHHHHHcC
Q psy775 484 ALICNPYEIDAAAEVIHRALT 504 (1460)
Q Consensus 484 allVNP~D~~elA~AI~~aL~ 504 (1460)
|++++ |.+++|+.|..+.+
T Consensus 386 GlvF~--Ds~eLa~ql~~lf~ 404 (444)
T KOG2941|consen 386 GLVFE--DSEELAEQLQMLFK 404 (444)
T ss_pred ceEec--cHHHHHHHHHHHHh
Confidence 99996 89999999998877
No 329
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=87.46 E-value=0.87 Score=49.83 Aligned_cols=55 Identities=22% Similarity=0.212 Sum_probs=41.3
Q ss_pred EEEEecCCCcCCCCC-----------C----------CCCccCChhHHHHHHHHhcCCCceEEEEeCC-chhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAP-----------H----------PDMAVLPEETKRTLQKLANLPDVHISIISGR-NVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~-----------~----------p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR-~~~~l~~~l 95 (1460)
++.||.||||..+.. + -....+.|++.+.|+.|+++ |++++|+|+. +...+...+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~-G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 4 VIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDA-GTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred EEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHC-CCEEEEEeCCCChHHHHHHH
Confidence 788999999986321 1 11256678999999999999 9999999988 655544444
No 330
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=87.31 E-value=0.65 Score=48.54 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=25.2
Q ss_pred ChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 62 PEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 62 p~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+++.+.|+.|+++ |++++|+|+++...+...+
T Consensus 66 ~~g~~e~l~~L~~~-g~~~~i~T~~~~~~~~~~~ 98 (154)
T TIGR01549 66 IRGAADLLKRLKEA-GIKLGIISNGSLRAQKLLL 98 (154)
T ss_pred ccCHHHHHHHHHHC-cCeEEEEeCCchHHHHHHH
Confidence 36788889999888 8899999988766654443
No 331
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=87.23 E-value=0.64 Score=54.19 Aligned_cols=41 Identities=17% Similarity=0.259 Sum_probs=35.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
+++||+||||.. ....-|++.++|++|+++ |.++.++|..+
T Consensus 10 ~~l~DlDGvl~~------G~~~ipga~e~l~~L~~~-g~~~iflTNn~ 50 (269)
T COG0647 10 GFLFDLDGVLYR------GNEAIPGAAEALKRLKAA-GKPVIFLTNNS 50 (269)
T ss_pred EEEEcCcCceEe------CCccCchHHHHHHHHHHc-CCeEEEEeCCC
Confidence 589999999984 234567999999999999 99999999765
No 332
>PLN02645 phosphoglycolate phosphatase
Probab=87.19 E-value=1.5 Score=52.05 Aligned_cols=57 Identities=25% Similarity=0.374 Sum_probs=43.3
Q ss_pred CCCChhhHHHHHHHhhcCCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1375 QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1375 ~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
++-...++.+.+..+ + +++||.||||..= ..+.|++.++|++|.++ +.+++++|+|+
T Consensus 14 ~~~~~~~~~~~~~~~----~--~~~~D~DGtl~~~------~~~~~ga~e~l~~lr~~-g~~~~~~TN~~ 70 (311)
T PLN02645 14 QLLTLENADELIDSV----E--TFIFDCDGVIWKG------DKLIEGVPETLDMLRSM-GKKLVFVTNNS 70 (311)
T ss_pred ccCCHHHHHHHHHhC----C--EEEEeCcCCeEeC------CccCcCHHHHHHHHHHC-CCEEEEEeCCC
Confidence 445556677766653 2 7899999999752 13457889999999876 67999999999
No 333
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=87.12 E-value=0.97 Score=50.59 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=18.3
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVME 93 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~ 93 (1460)
.+.|++.+.|+.|+++ |++++|+||-....+..
T Consensus 74 ~l~pG~~e~l~~l~~~-g~~~~IvS~~~~~~i~~ 106 (219)
T PRK09552 74 EIREGFHEFVQFVKEN-NIPFYVVSGGMDFFVYP 106 (219)
T ss_pred CcCcCHHHHHHHHHHc-CCeEEEECCCcHHHHHH
Confidence 3445555666666665 66666666655433433
No 334
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=87.10 E-value=1.2 Score=51.89 Aligned_cols=64 Identities=27% Similarity=0.278 Sum_probs=45.2
Q ss_pred hhHHHHHHHhhcCCCcEEEEEecCCCCCCCCC---------CC------------CCcCCChhHHHHHHHHhcCCCceEE
Q psy775 1380 EDFDEYLSKYIGTTNKLALLLDYDGTLAPIAP---------HP------------DMAVLPEETKRTLQKLANLPDVHIS 1438 (1460)
Q Consensus 1380 ~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~~---------~P------------~~a~~~~~~~~~L~~La~~~~~~vA 1438 (1460)
..+++++.. ...++.++.||+|+|+..-.+ .| ..+.+-|++.+.|+.|.++ ++.++
T Consensus 62 ~~~~~~~~~--~~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~-G~~v~ 138 (266)
T TIGR01533 62 MRLDNNLKK--VKDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK-GVKIF 138 (266)
T ss_pred HHHHHHHhc--cCCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCeEE
Confidence 445555543 235678999999999964221 11 2355678899999999876 57999
Q ss_pred EEcCCChh
Q psy775 1439 IISGRNVH 1446 (1460)
Q Consensus 1439 vvSGR~~~ 1446 (1460)
+||+|+..
T Consensus 139 iVTnR~~~ 146 (266)
T TIGR01533 139 YVSNRSEK 146 (266)
T ss_pred EEeCCCcc
Confidence 99999843
No 335
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=86.91 E-value=0.56 Score=51.56 Aligned_cols=48 Identities=23% Similarity=0.232 Sum_probs=38.8
Q ss_pred cEEEEEecCCCcCCCCC----CCCCccCChhHHHHHHHHhcCCCceEEEEeCC
Q psy775 38 KLALLLDYDGTLAPIAP----HPDMAVLPEETKRTLQKLANLPDVHISIISGR 86 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~----~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR 86 (1460)
.-++|+|=||||..-.. .++.-...+++.+||.+|++. |++++|+|.-
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~-gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRA-GYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhC-CCeEEEEECC
Confidence 45899999999985332 234556778999999999988 9999999973
No 336
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=86.51 E-value=1.5 Score=47.43 Aligned_cols=51 Identities=22% Similarity=0.330 Sum_probs=42.5
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+++|+|-||++.. +...+|++++=+..++++ |.+++|+|.-+..-+....
T Consensus 30 gvi~DlDNTLv~wd----~~~~tpe~~~W~~e~k~~-gi~v~vvSNn~e~RV~~~~ 80 (175)
T COG2179 30 GVILDLDNTLVPWD----NPDATPELRAWLAELKEA-GIKVVVVSNNKESRVARAA 80 (175)
T ss_pred EEEEeccCceeccc----CCCCCHHHHHHHHHHHhc-CCEEEEEeCCCHHHHHhhh
Confidence 89999999999983 446899999999999999 9999999996654444333
No 337
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=86.32 E-value=33 Score=41.56 Aligned_cols=73 Identities=16% Similarity=0.266 Sum_probs=49.5
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCc----hhcc---cccEEECCC--
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGA----GEQM---HEALICNPY-- 490 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGa----a~~L---~~allVNP~-- 490 (1460)
+.+.+.+++.++ +..||++|- .-|+| +..|+++++.| +|+--..+- +..+ +-|+.+++.
T Consensus 290 v~~~~~~p~~~l---l~~~d~~I~---hgG~~-t~~eal~~GvP-----~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~ 357 (401)
T cd03784 290 VRVVDFVPHDWL---LPRCAAVVH---HGGAG-TTAAALRAGVP-----QLVVPFFGDQPFWAARVAELGAGPALDPREL 357 (401)
T ss_pred eEEeCCCCHHHH---hhhhheeee---cCCch-hHHHHHHcCCC-----EEeeCCCCCcHHHHHHHHHCCCCCCCCcccC
Confidence 345577887665 788999994 66765 67999999544 455544431 2222 226666655
Q ss_pred CHHHHHHHHHHHcC
Q psy775 491 EIDAAAEVIHRALT 504 (1460)
Q Consensus 491 D~~elA~AI~~aL~ 504 (1460)
+.+++++++.++|+
T Consensus 358 ~~~~l~~al~~~l~ 371 (401)
T cd03784 358 TAERLAAALRRLLD 371 (401)
T ss_pred CHHHHHHHHHHHhC
Confidence 68999999999998
No 338
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=86.31 E-value=0.76 Score=49.43 Aligned_cols=44 Identities=27% Similarity=0.468 Sum_probs=33.2
Q ss_pred EEEEecCCCCCC------CCCCCCC-cCCChhHHHHHHHHhcCCCceEEEEc
Q psy775 1397 ALLLDYDGTLAP------IAPHPDM-AVLPEETKRTLQKLANLPDVHISIIS 1441 (1460)
Q Consensus 1397 ~l~lD~DGTLap------i~~~P~~-a~~~~~~~~~L~~La~~~~~~vAvvS 1441 (1460)
.++||+||||.. +..+|++ ...++++.++|++|.+. +..++|||
T Consensus 2 ia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~-Gy~IvIvT 52 (159)
T PF08645_consen 2 IAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK-GYKIVIVT 52 (159)
T ss_dssp EEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT-TEEEEEEE
T ss_pred EEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc-CCeEEEEe
Confidence 478999999975 4456777 45677899999999775 67899998
No 339
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=86.30 E-value=1.5 Score=46.37 Aligned_cols=56 Identities=14% Similarity=0.113 Sum_probs=41.3
Q ss_pred cEEEEEecCCCcCCCCC--CCCCc-------------------cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 38 KLALLLDYDGTLAPIAP--HPDMA-------------------VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~--~p~~a-------------------~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+..+.+|+||||+.... .++.. .+-|++.+.|..|+ + ++.++|+|+.+...+...+
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~-~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-E-LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-h-ccEEEEEeCCcHHHHHHHH
Confidence 46899999999998631 11111 34678999999998 4 6899999998876655544
No 340
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=86.17 E-value=1.1 Score=50.64 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=23.6
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
+-|++.+.|+.|+++ |++++|+|+-+...+...+
T Consensus 94 ~~~g~~e~L~~Lk~~-g~~~~i~Tn~~~~~~~~~l 127 (224)
T PRK14988 94 LREDTVPFLEALKAS-GKRRILLTNAHPHNLAVKL 127 (224)
T ss_pred cCCCHHHHHHHHHhC-CCeEEEEeCcCHHHHHHHH
Confidence 456778888888887 8888888886554444333
No 341
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=86.05 E-value=65 Score=39.30 Aligned_cols=72 Identities=8% Similarity=0.147 Sum_probs=49.2
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc--ccc-EEECCCCHHHHH
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM--HEA-LICNPYEIDAAA 496 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L--~~a-llVNP~D~~elA 496 (1460)
+.+.++++..++.+|++.|++++-.|- =|+ .||.+.++|. +.+. .-.+.+ +.. ++| +.|++++.
T Consensus 264 v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~Pv----v~l~---~R~e~~~~g~nvl~v-g~~~~~I~ 330 (365)
T TIGR03568 264 FRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGVPT----INIG---TRQKGRLRADSVIDV-DPDKEEIV 330 (365)
T ss_pred EEEECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCCCE----Eeec---CCchhhhhcCeEEEe-CCCHHHHH
Confidence 456699999999999999999996552 122 7999985442 2222 222222 223 457 66999999
Q ss_pred HHHHHHcC
Q psy775 497 EVIHRALT 504 (1460)
Q Consensus 497 ~AI~~aL~ 504 (1460)
+++.++++
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999654
No 342
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=86.04 E-value=0.93 Score=54.09 Aligned_cols=48 Identities=17% Similarity=0.168 Sum_probs=35.3
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcC---CCceEEEEe---CCchhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANL---PDVHISIIS---GRNVHNVME 93 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~---~g~~v~IvT---GR~~~~l~~ 93 (1460)
+++||+||||+.- ..+-+++.++++.|+++ .|.++.++| |++.....+
T Consensus 2 ~~ifD~DGvL~~g------~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~ 55 (321)
T TIGR01456 2 GFAFDIDGVLFRG------KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAE 55 (321)
T ss_pred EEEEeCcCceECC------ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHH
Confidence 6899999999852 23478999999999985 367778777 444555433
No 343
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=85.88 E-value=0.86 Score=52.62 Aligned_cols=48 Identities=17% Similarity=0.295 Sum_probs=36.1
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 1447 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~ 1447 (1460)
+++||.||||..-.. + .-.+.|++.++|++|.++ +.+++++|||+...
T Consensus 3 ~i~~D~DGtl~~~~~-~-~~~~~~~a~~al~~l~~~-G~~~~~~Tn~~~~~ 50 (257)
T TIGR01458 3 GVLLDISGVLYISDA-K-SGVAVPGSQEAVKRLRGA-SVKVRFVTNTTKES 50 (257)
T ss_pred EEEEeCCCeEEeCCC-c-ccCcCCCHHHHHHHHHHC-CCeEEEEECCCCCC
Confidence 688999999974311 0 012577999999999876 67999999977664
No 344
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=85.77 E-value=1.4 Score=47.67 Aligned_cols=43 Identities=21% Similarity=0.216 Sum_probs=36.3
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
++++|+||||.+- +...+.|++.++|+.|.+. +..++|+|+.+
T Consensus 27 ~vv~D~Dgtl~~~----~~~~~~pgv~e~L~~Lk~~-g~~l~I~Sn~~ 69 (170)
T TIGR01668 27 GVVLDKDNTLVYP----DHNEAYPALRDWIEELKAA-GRKLLIVSNNA 69 (170)
T ss_pred EEEEecCCccccC----CCCCcChhHHHHHHHHHHc-CCEEEEEeCCc
Confidence 7899999999854 3456788999999999766 46999999988
No 345
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=85.56 E-value=0.93 Score=54.89 Aligned_cols=46 Identities=22% Similarity=0.299 Sum_probs=40.1
Q ss_pred EEEEecCCCCCCC------CCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCC
Q psy775 1397 ALLLDYDGTLAPI------APHPDMAVLPEETKRTLQKLANLPDVHISIISGR 1443 (1460)
Q Consensus 1397 ~l~lD~DGTLapi------~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR 1443 (1460)
++|||+||||..- +..|+...+.|++.++|..|.+. +.+++|+|..
T Consensus 4 ~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~-G~kL~IvTNq 55 (354)
T PRK05446 4 ILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA-GYKLVMVTNQ 55 (354)
T ss_pred EEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC-CCeEEEEECC
Confidence 7999999999984 56778899999999999999654 6799999984
No 346
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=83.65 E-value=1 Score=48.81 Aligned_cols=47 Identities=17% Similarity=0.323 Sum_probs=38.2
Q ss_pred EEEEecCCCCCC----CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAP----IAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLap----i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
+++||-||||.- ....+....+-|++.++|++|.+. +.++||+|..+
T Consensus 5 ~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-g~~l~I~Tn~~ 55 (181)
T PRK08942 5 AIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA-GYRVVVATNQS 55 (181)
T ss_pred EEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 689999999843 334456677889999999999886 67999999876
No 347
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=83.44 E-value=1.6 Score=52.00 Aligned_cols=56 Identities=18% Similarity=0.242 Sum_probs=43.6
Q ss_pred EEEEecCCCcCCCCCCCC------CccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIAPHPD------MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~------~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
++++|.|+||..-+-..+ -..+.+++.+.|.+|+++ |+.++|||..+...+.+.+.
T Consensus 5 ~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~-Gi~lai~S~n~~~~a~~~l~ 66 (320)
T TIGR01686 5 VLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ-GFLLALASKNDEDDAKKVFE 66 (320)
T ss_pred EEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHH
Confidence 788999999998542111 112457899999999999 99999999998777766653
No 348
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=83.34 E-value=1.2 Score=48.80 Aligned_cols=32 Identities=13% Similarity=0.033 Sum_probs=21.4
Q ss_pred ChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 62 PEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 62 p~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.|++.+.|+.|+++ ++++|+||.....+...+
T Consensus 70 ~pg~~e~L~~L~~~--~~~~IvS~~~~~~~~~~l 101 (205)
T PRK13582 70 LPGAVEFLDWLRER--FQVVILSDTFYEFAGPLM 101 (205)
T ss_pred CCCHHHHHHHHHhc--CCEEEEeCCcHHHHHHHH
Confidence 46667777777776 577788887655554443
No 349
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=83.06 E-value=1.6 Score=47.70 Aligned_cols=56 Identities=21% Similarity=0.221 Sum_probs=34.6
Q ss_pred EEEEecCCCcCCCCCC--------------------CCCccCChhHHHHHHHHhcCCCceEEEEeCCc-hhhhhhhhc
Q psy775 40 ALLLDYDGTLAPIAPH--------------------PDMAVLPEETKRTLQKLANLPDVHISIISGRN-VHNVMEMVG 96 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~--------------------p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~-~~~l~~~l~ 96 (1460)
++.||.|+||.|+-.+ -+...+-|.+..+|+.|+++ |++++++|==+ ++-+++.+.
T Consensus 5 lvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~-gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 5 LVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKER-GVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp EEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHC-T--EEEEE--S-HHHHHHHHH
T ss_pred EEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHC-CCEEEEEECCCChHHHHHHHH
Confidence 7899999999985322 12334668899999999998 99999999432 334445443
No 350
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=82.37 E-value=1.4 Score=48.28 Aligned_cols=37 Identities=14% Similarity=0.022 Sum_probs=28.4
Q ss_pred CCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh---cCCC
Q psy775 1417 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM---VGIE 1455 (1460)
Q Consensus 1417 ~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~---~~~~ 1455 (1460)
.+.|++.+.|+.|.+. ++++|+||.....+... +|++
T Consensus 68 ~~~pg~~e~L~~L~~~--~~~~IvS~~~~~~~~~~l~~~gl~ 107 (205)
T PRK13582 68 DPLPGAVEFLDWLRER--FQVVILSDTFYEFAGPLMRQLGWP 107 (205)
T ss_pred CCCCCHHHHHHHHHhc--CCEEEEeCCcHHHHHHHHHHcCCc
Confidence 3457788899999876 48999999998866655 5554
No 351
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=82.18 E-value=2.5 Score=47.27 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=27.3
Q ss_pred cCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1416 AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1416 a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
+.+.|++.+.|+.|.++ +.+++||||-...-+...+
T Consensus 73 ~~l~pG~~e~l~~l~~~-g~~~~IvS~~~~~~i~~il 108 (219)
T PRK09552 73 AEIREGFHEFVQFVKEN-NIPFYVVSGGMDFFVYPLL 108 (219)
T ss_pred CCcCcCHHHHHHHHHHc-CCeEEEECCCcHHHHHHHH
Confidence 45667788888887654 6799999999887776654
No 352
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=82.01 E-value=39 Score=41.40 Aligned_cols=232 Identities=14% Similarity=0.077 Sum_probs=117.1
Q ss_pred CCCEEEEeCcc--hhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYH--LMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYh--L~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~ 288 (1460)
+.|++..=||- =+.|...||+. +|+.+|..+.- |.+|.==|.|...+.. .+|++---.+--.. |.+
T Consensus 85 kpD~~i~IDsPdFnl~vak~lrk~----~p~i~iihYV~-----PsVWAWr~~Ra~~i~~--~~D~lLailPFE~~-~y~ 152 (381)
T COG0763 85 KPDVLILIDSPDFNLRVAKKLRKA----GPKIKIIHYVS-----PSVWAWRPKRAVKIAK--YVDHLLAILPFEPA-FYD 152 (381)
T ss_pred CCCEEEEeCCCCCchHHHHHHHHh----CCCCCeEEEEC-----cceeeechhhHHHHHH--HhhHeeeecCCCHH-HHH
Confidence 46777776654 25677888875 45788876654 5566555566443333 25655432221111 111
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhc--cC-CeEEEEec--CccccCCHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID--TK-QKIVLGVD--RLDYTKGLVHRLKAF 363 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~--~~-~kvIL~Vg--RLd~~KGI~~lL~Af 363 (1460)
+.+.-..|-||+. .|.-.+.+..+.+++... .+ +.+.+--| |=+-..-++-.++|+
T Consensus 153 -----------k~g~~~~yVGHpl--------~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~ 213 (381)
T COG0763 153 -----------KFGLPCTYVGHPL--------ADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAA 213 (381)
T ss_pred -----------hcCCCeEEeCChh--------hhhccccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHH
Confidence 1111123434432 221112111111122221 23 33333322 333445567778888
Q ss_pred HHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEE
Q psy775 364 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALV 443 (1460)
Q Consensus 364 ~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~Vv 443 (1460)
+++.+++|+.+ ++.-..+ +.|+.++.+.... -.. .+..++ ...+-...+.+||+.+.
T Consensus 214 ~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~~~---~~~-------~~~~~~----~~~~~~~a~~~aD~al~ 270 (381)
T COG0763 214 QELKARYPDLK----FVLPLVN-----AKYRRIIEEALKW---EVA-------GLSLIL----IDGEKRKAFAAADAALA 270 (381)
T ss_pred HHHHhhCCCce----EEEecCc-----HHHHHHHHHHhhc---ccc-------CceEEe----cCchHHHHHHHhhHHHH
Confidence 89988999975 3222212 2333333332211 000 011222 23444567999999999
Q ss_pred ccCCCCCCcceeeeeeeccCCCCCeEEEcCC-----------------CCchhcccccEEEC-----CCCHHHHHHHHHH
Q psy775 444 TPLRDGMNLVAKEFVACQINEPPGVLIVSPF-----------------AGAGEQMHEALICN-----PYEIDAAAEVIHR 501 (1460)
Q Consensus 444 pSlrEGfnLValEamAcq~~~~~GvlVlSe~-----------------aGaa~~L~~allVN-----P~D~~elA~AI~~ 501 (1460)
.| |.+.+|++.|++| .|++=- .+....+.+-.+|+ ---++.+|+++..
T Consensus 271 aS-----GT~tLE~aL~g~P-----~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ 340 (381)
T COG0763 271 AS-----GTATLEAALAGTP-----MVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEE 340 (381)
T ss_pred hc-----cHHHHHHHHhCCC-----EEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHH
Confidence 99 8999999999655 344322 22222222212221 0236899999999
Q ss_pred HcCCC
Q psy775 502 ALTMP 506 (1460)
Q Consensus 502 aL~m~ 506 (1460)
.+..+
T Consensus 341 ll~~~ 345 (381)
T COG0763 341 LLLNG 345 (381)
T ss_pred HhcCh
Confidence 99876
No 353
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=81.90 E-value=1.6 Score=50.89 Aligned_cols=41 Identities=17% Similarity=0.223 Sum_probs=32.4
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
++++|.||||..= ..+-|++.++|++|.+. +.+++++|||+
T Consensus 4 ~~~~D~DGtl~~~------~~~~~ga~e~l~~L~~~-g~~~~~~Tnns 44 (279)
T TIGR01452 4 GFIFDCDGVLWLG------ERVVPGAPELLDRLARA-GKAALFVTNNS 44 (279)
T ss_pred EEEEeCCCceEcC------CeeCcCHHHHHHHHHHC-CCeEEEEeCCC
Confidence 6889999999551 22455689999999876 57999999976
No 354
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=81.10 E-value=65 Score=39.69 Aligned_cols=240 Identities=15% Similarity=0.146 Sum_probs=123.4
Q ss_pred CCCEEEEeCcch--hHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHHhhhccCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHL--MLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL--~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil~gLL~aDlIgF~t~~yar~FL~ 288 (1460)
+.|+|..=||.= +-++..+|++ |++.+|.++.- |.+|.==++|...++.. +|++--- +.+-..|.+
T Consensus 82 ~pd~vIlID~pgFNlrlak~lk~~----~~~~~viyYI~-----PqvWAWr~~R~~~i~~~--~D~ll~i-fPFE~~~y~ 149 (373)
T PF02684_consen 82 KPDVVILIDYPGFNLRLAKKLKKR----GIPIKVIYYIS-----PQVWAWRPGRAKKIKKY--VDHLLVI-FPFEPEFYK 149 (373)
T ss_pred CCCEEEEeCCCCccHHHHHHHHHh----CCCceEEEEEC-----CceeeeCccHHHHHHHH--HhheeEC-CcccHHHHh
Confidence 467777777652 5667788864 44566765543 56665556776666653 4443211 111122222
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhhhhccchhhhccCCeE--EEEecCccccCCH-HHHHHHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKI--VLGVDRLDYTKGL-VHRLKAFET 365 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kv--IL~VgRLd~~KGI-~~lL~Af~~ 365 (1460)
..+.-..|-||+.-=.+ +..-+..... ......++++ ++-=+|-...+-+ +..++|.++
T Consensus 150 -----------~~g~~~~~VGHPl~d~~-~~~~~~~~~~------~~~l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~ 211 (373)
T PF02684_consen 150 -----------KHGVPVTYVGHPLLDEV-KPEPDRAEAR------EKLLDPDKPIIALLPGSRKSEIKRLLPIFLEAAKL 211 (373)
T ss_pred -----------ccCCCeEEECCcchhhh-ccCCCHHHHH------HhcCCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 11112344454431111 1100100000 0111133333 3345666655544 888999999
Q ss_pred HHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEcc
Q psy775 366 LLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTP 445 (1460)
Q Consensus 366 lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpS 445 (1460)
+.+++|+++ ++....+. .+. +.+++.....+.. .++... ..+-..++++||+.+++|
T Consensus 212 l~~~~p~l~----fvvp~a~~-----~~~---~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m~~ad~al~~S 268 (373)
T PF02684_consen 212 LKKQRPDLQ----FVVPVAPE-----VHE---ELIEEILAEYPPD------VSIVII-----EGESYDAMAAADAALAAS 268 (373)
T ss_pred HHHhCCCeE----EEEecCCH-----HHH---HHHHHHHHhhCCC------CeEEEc-----CCchHHHHHhCcchhhcC
Confidence 999999863 43333221 111 1222222222211 122222 234557799999999999
Q ss_pred CCCCCCcceeeeeeeccCC----C--------CCeEEEcCCCCchhccccc-----EEECCCCHHHHHHHHHHHcCCCHH
Q psy775 446 LRDGMNLVAKEFVACQINE----P--------PGVLIVSPFAGAGEQMHEA-----LICNPYEIDAAAEVIHRALTMPED 508 (1460)
Q Consensus 446 lrEGfnLValEamAcq~~~----~--------~GvlVlSe~aGaa~~L~~a-----llVNP~D~~elA~AI~~aL~m~~~ 508 (1460)
|.+.+|++..+.|. + .-.+|=..+.|....+.+- ++-+-.+++.+++++.+.|+.++.
T Consensus 269 -----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 269 -----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPEK 343 (373)
T ss_pred -----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHHH
Confidence 89999999886662 0 0011223344444444331 223345789999999999997655
No 355
>PRK08238 hypothetical protein; Validated
Probab=81.06 E-value=2.9 Score=52.80 Aligned_cols=46 Identities=9% Similarity=-0.031 Sum_probs=33.7
Q ss_pred CChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccc--cceeEccCC
Q psy775 61 LPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIE--GLTYAGNHG 107 (1460)
Q Consensus 61 ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~--~~~~ig~hG 107 (1460)
..|++.+.|++++++ |++++|+|+.+...+....... ....+|+++
T Consensus 73 ~~pga~e~L~~lk~~-G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 73 YNEEVLDYLRAERAA-GRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CChhHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 458999999999999 9999999998876665544322 234455544
No 356
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=80.89 E-value=21 Score=43.96 Aligned_cols=107 Identities=16% Similarity=0.214 Sum_probs=59.8
Q ss_pred EEEEEcC-ccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCC------CC
Q psy775 743 IVLGVDR-LDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT------PN 815 (1460)
Q Consensus 743 iIl~VdR-Ld~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~------~~ 815 (1460)
+++.-.| =+-.++++..++|.+++.++ |+ +.++..+.+.. +++.+++.+. +.+-.... ..
T Consensus 209 llLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~~----~~~~~~~~l~----~~g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 209 ALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPSL----SLEKLQAILE----DLGWQLEGSSEDQTSL 275 (396)
T ss_pred EEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCCC----CHHHHHHHHH----hcCceecCCccccchh
Confidence 3455566 35667889999999998655 54 45554443331 2223333332 11110000 00
Q ss_pred C--ccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 816 W--SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 816 ~--~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
| ..+.+.. ...+...+|+.||++|..| |-+..|++++ +.|.|+-.+.
T Consensus 276 ~~~~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~l-----g~P~Ilip~~ 324 (396)
T TIGR03492 276 FQKGTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGL-----GKPVIQLPGK 324 (396)
T ss_pred hccCceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHh-----CCCEEEEeCC
Confidence 0 1122221 2457889999999999986 3566999888 5566776653
No 357
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=80.68 E-value=3.6 Score=44.90 Aligned_cols=59 Identities=29% Similarity=0.380 Sum_probs=47.0
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCc-eEEEEcCCC----------hhhHHHhcCCCCccc
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDV-HISIISGRN----------VHNVMEMVGIEGLTY 1459 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~-~vAvvSGR~----------~~~l~~~~~~~~~~y 1459 (1460)
++.||+|.||++ |....++|+..+.++++.+.++. .|.|||=-. ++.+.+-+|++-+.|
T Consensus 43 ~li~DkDNTL~~----~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl~h 112 (168)
T PF09419_consen 43 ALIFDKDNTLTP----PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVLRH 112 (168)
T ss_pred EEEEcCCCCCCC----CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEEEe
Confidence 789999999986 67788999999999999988753 599999653 555777788775443
No 358
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=80.01 E-value=17 Score=45.85 Aligned_cols=109 Identities=16% Similarity=0.128 Sum_probs=59.4
Q ss_pred cCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCccc
Q psy775 339 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 418 (1460)
Q Consensus 339 ~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~p 418 (1460)
.+..++.+..+ ..|=-+..++.+.++|++-|+.+ |+....+. ..+ +.+++.+. +. |-. -.-
T Consensus 283 ~d~vvF~~fn~--~~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~~--~~l~~~~~----~~----Gv~-~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNN--LFKISPETLDLWARILKAVPNSR----LWLLRFPA--SGE--ARLRRRFA----AH----GVD-PDR 343 (468)
T ss_dssp SSSEEEEE-S---GGG--HHHHHHHHHHHHHSTTEE----EEEEETST--THH--HHHHHHHH----HT----TS--GGG
T ss_pred CCceEEEecCc--cccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HHH--HHHHHHHH----Hc----CCC-hhh
Confidence 44444445555 45678999999999999999863 44444332 111 23333322 21 211 123
Q ss_pred EEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC
Q psy775 419 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474 (1460)
Q Consensus 419 Iv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~ 474 (1460)
++ |.+..+.++....|+.+||++-|..+-| +.+.+||++. |++|+|-.
T Consensus 344 i~-f~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm------GVPvVTl~ 391 (468)
T PF13844_consen 344 II-FSPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM------GVPVVTLP 391 (468)
T ss_dssp EE-EEE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH------T--EEB--
T ss_pred EE-EcCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc------CCCEEecc
Confidence 55 4567788999999999999999988777 4578899988 55565543
No 359
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=79.45 E-value=0.34 Score=50.29 Aligned_cols=92 Identities=16% Similarity=0.093 Sum_probs=43.3
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCc-----HHHHhh-hccCceeeeccHHhHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWS-----DEILQG-MLGCDMVGFHIEDYCL 284 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r-----~eil~g-LL~aDlIgF~t~~yar 284 (1460)
+.|+|.+|.++...+...-.. +.++.+++|.+++.........+. ..+.+. .-.+|.+-.-+..-.+
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~-------~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~ 152 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR-------KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKD 152 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH-------CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHH
T ss_pred CCCeEEecccchhHHHHHhcc-------CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHH
Confidence 479999999887655533321 478999999887531111111111 111111 2346766555554444
Q ss_pred HHHHHHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhh
Q psy775 285 NFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFV 327 (1460)
Q Consensus 285 ~FL~~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~ 327 (1460)
.+.+ +| -...++.++|+|||.+.|.
T Consensus 153 ~l~~-----~~-------------~~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 153 ELIK-----FG-------------IPPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHH-----HT---------------SS-EEE----B-CCCH-
T ss_pred HHHH-----hC-------------CcccCCEEEECCccHHHcC
Confidence 4433 11 1235788999999999884
No 360
>PTZ00445 p36-lilke protein; Provisional
Probab=79.43 E-value=3.7 Score=46.31 Aligned_cols=68 Identities=15% Similarity=0.135 Sum_probs=49.0
Q ss_pred CCCChhhHHHHHHHhhcCCCcEEEEEecCCCcCCCCCCCC-Ccc---------CChhHHHHHHHHhcCCCceEEEEeCCc
Q psy775 18 GMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPD-MAV---------LPEETKRTLQKLANLPDVHISIISGRN 87 (1460)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~lFfDiDGTL~~~~~~p~-~a~---------ip~s~~~aL~~L~~~~g~~v~IvTGR~ 87 (1460)
|-...+..+.+++.|.... =-++++|+|=||++..+.-. +.. ++|+.+.-+.+|++. |++|+|+|=-+
T Consensus 24 ~~~~~~~~~~~v~~L~~~G-Ik~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~-~I~v~VVTfSd 101 (219)
T PTZ00445 24 HLNPHESADKFVDLLNECG-IKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNS-NIKISVVTFSD 101 (219)
T ss_pred cCCHHHHHHHHHHHHHHcC-CeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHC-CCeEEEEEccc
Confidence 3366677777777755433 33899999999998332211 112 688899999999998 99999999744
No 361
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=79.31 E-value=1.7 Score=46.63 Aligned_cols=53 Identities=25% Similarity=0.412 Sum_probs=32.2
Q ss_pred EEEEecCCCCCC----CCCCCCC--cC-CChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAP----IAPHPDM--AV-LPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLap----i~~~P~~--a~-~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
++++|.||||+. ..++=+. ++ +-++ ..++.|.+ .++.|||||||+..-+.++.
T Consensus 10 Lli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG--~Gik~l~~-~Gi~vAIITGr~s~ive~Ra 69 (170)
T COG1778 10 LLILDVDGVLTDGKLYYDENGEEIKAFNVRDG--HGIKLLLK-SGIKVAIITGRDSPIVEKRA 69 (170)
T ss_pred EEEEeccceeecCeEEEcCCCceeeeeeccCc--HHHHHHHH-cCCeEEEEeCCCCHHHHHHH
Confidence 678999999998 1111111 10 0111 22334443 36799999999988877664
No 362
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=78.92 E-value=4.4 Score=42.78 Aligned_cols=57 Identities=16% Similarity=0.177 Sum_probs=42.4
Q ss_pred cEEEEEecCCCCCCCCC--CCCC-------------------cCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcC
Q psy775 1395 KLALLLDYDGTLAPIAP--HPDM-------------------AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~--~P~~-------------------a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~ 1453 (1460)
+..|.||.||||..-.. .++. +.+-|++.+.|+.|.+. ..+||+|..+...+...+.
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~--~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASEL--FELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhc--cEEEEEeCCcHHHHHHHHH
Confidence 56899999999998642 1111 13367899999999854 6899999999887665443
No 363
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=76.41 E-value=2.3 Score=50.95 Aligned_cols=16 Identities=25% Similarity=0.264 Sum_probs=13.0
Q ss_pred CCcEEEEEecCCCcCC
Q psy775 36 TNKLALLLDYDGTLAP 51 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~ 51 (1460)
...-+++||+||||+.
T Consensus 108 ~~~~LvvfDmDGTLI~ 123 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQ 123 (322)
T ss_pred cCCCEEEEECCCCCcc
Confidence 3445899999999986
No 364
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=75.80 E-value=3.9 Score=40.68 Aligned_cols=46 Identities=17% Similarity=0.211 Sum_probs=34.6
Q ss_pred EEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcC---CChhhHHH
Q psy775 1398 LLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISG---RNVHNVME 1450 (1460)
Q Consensus 1398 l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSG---R~~~~l~~ 1450 (1460)
+++|.||||.- ...+-|++.++|++|.++ +.++.++|- |+.+++.+
T Consensus 1 ~l~D~dGvl~~------g~~~ipga~e~l~~L~~~-g~~~~~lTNns~~s~~~~~~ 49 (101)
T PF13344_consen 1 FLFDLDGVLYN------GNEPIPGAVEALDALRER-GKPVVFLTNNSSRSREEYAK 49 (101)
T ss_dssp EEEESTTTSEE------TTEE-TTHHHHHHHHHHT-TSEEEEEES-SSS-HHHHHH
T ss_pred CEEeCccEeEe------CCCcCcCHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHH
Confidence 57999999985 455678999999999887 569999985 44445543
No 365
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=75.79 E-value=8 Score=44.42 Aligned_cols=93 Identities=20% Similarity=0.263 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCEEEEeCcchhHHHHHHHhhhhcc--CCCceEEEEEec-C----CCCccc-cccCCC
Q psy775 190 EFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQ--NLKFKLGFFLHI-P----FPPWDI-FRLFPW 261 (1460)
Q Consensus 190 ~FA~~I~e~~~~~~~~~~~~~~gDvVwIHDYhL~llP~~LR~~~p~~--~~~~~IgfFlHi-P----FPs~ei-fr~LP~ 261 (1460)
.|+.++++.++.+ .-..|+|-+||.|-.++|.+|+...... ..+.++.|.+|- - ||.... ..-+|+
T Consensus 118 ~fs~a~le~~~~l------~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~ 191 (245)
T PF08323_consen 118 FFSRAALELLKKL------GWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPD 191 (245)
T ss_dssp HHHHHHHHHHCTC------T-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GG
T ss_pred HHHHHHHHHHHhh------CCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCH
Confidence 6777777777532 1257999999999999999999853210 125899999994 2 332111 011221
Q ss_pred --------------cHHHHhhhccCceeeeccHHhHHHHHH
Q psy775 262 --------------SDEILQGMLGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 262 --------------r~eil~gLL~aDlIgF~t~~yar~FL~ 288 (1460)
-..+-.|+..||.|-.=++.|++.-++
T Consensus 192 ~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 192 EYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 136678999999999999999876554
No 366
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=74.12 E-value=28 Score=42.21 Aligned_cols=164 Identities=10% Similarity=0.115 Sum_probs=96.0
Q ss_pred eEEEEEEeecccCchhhhhhhccchhhhccCCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCC
Q psy775 310 RTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTD 389 (1460)
Q Consensus 310 r~vkV~viPiGID~~~f~~~~~~~~~~~~~~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~ 389 (1460)
....+-.+|.-+|+..-... . .....++..|+-=-.=|++-+....|+++.+... .+ +.++ ++-+.++
T Consensus 158 ~~~~~lyfPt~m~~~~~~~~-~---~~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~~--~~----~kIi--vPLsYg~ 225 (360)
T PF07429_consen 158 VPASLLYFPTRMDPALTLSE-K---NKKNKGKLTILVGNSGDPSNNHIEALEALKQQFG--DD----VKII--VPLSYGA 225 (360)
T ss_pred CCceEEEcCCCCchhhhccc-c---ccCCCCceEEEEcCCCCCCccHHHHHHHHHHhcC--CC----eEEE--EECCCCC
Confidence 33446677877776432111 0 0011233334433456788888887777765432 12 2222 2222222
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhccEEEEccCC-CCCCcceeeeeeeccCCCCCe
Q psy775 390 VKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLR-DGMNLVAKEFVACQINEPPGV 468 (1460)
Q Consensus 390 ~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlr-EGfnLValEamAcq~~~~~Gv 468 (1460)
..+++.++|.+.+.++ ||.. .+..+...+|.+|+.++++.||++++...| .|+|-..+ .+.+ |.+
T Consensus 226 --~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~-----G~~ 291 (360)
T PF07429_consen 226 --NNQAYIQQVIQAGKEL---FGAE---NFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL-----GKK 291 (360)
T ss_pred --chHHHHHHHHHHHHHh---cCcc---ceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-----CCe
Confidence 2345667777665554 3322 356677899999999999999999999975 68886644 2333 678
Q ss_pred EEEcCCCCchhcccc-cE--EE--CCCCHHHHHHHH
Q psy775 469 LIVSPFAGAGEQMHE-AL--IC--NPYEIDAAAEVI 499 (1460)
Q Consensus 469 lVlSe~aGaa~~L~~-al--lV--NP~D~~elA~AI 499 (1460)
+++|+-.-....+.+ ++ ++ +.-|...+++|=
T Consensus 292 v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~ 327 (360)
T PF07429_consen 292 VFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQ 327 (360)
T ss_pred EEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHH
Confidence 899998877777744 43 32 333444444443
No 367
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=73.73 E-value=94 Score=38.09 Aligned_cols=83 Identities=28% Similarity=0.389 Sum_probs=54.2
Q ss_pred HHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCc--hhcc---------cccEEECCCC--HHH
Q psy775 428 QDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGA--GEQM---------HEALICNPYE--IDA 494 (1460)
Q Consensus 428 ~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGa--a~~L---------~~allVNP~D--~~e 494 (1460)
.+++.++|++||+++.=| | ++++.|..||+.|. |+=-+... ..+. +.|+.+.-.+ ++.
T Consensus 243 ~~dm~~~~~~ADLvIsRa---G-a~Ti~E~~a~g~P~-----IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~ 313 (357)
T COG0707 243 IDDMAALLAAADLVISRA---G-ALTIAELLALGVPA-----ILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEK 313 (357)
T ss_pred HhhHHHHHHhccEEEeCC---c-ccHHHHHHHhCCCE-----EEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHH
Confidence 456999999999998844 3 57889999995553 44444333 1222 2377776656 789
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHH
Q psy775 495 AAEVIHRALTMPEDERTLRMNYLRKRE 521 (1460)
Q Consensus 495 lA~AI~~aL~m~~~er~~R~~~l~~~v 521 (1460)
+++.|.+++..+ ++..+|....+.+
T Consensus 314 l~~~i~~l~~~~--~~l~~m~~~a~~~ 338 (357)
T COG0707 314 LAELILRLLSNP--EKLKAMAENAKKL 338 (357)
T ss_pred HHHHHHHHhcCH--HHHHHHHHHHHhc
Confidence 999999998863 3333343333333
No 368
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=72.47 E-value=6.3 Score=44.04 Aligned_cols=54 Identities=19% Similarity=0.323 Sum_probs=0.0
Q ss_pred EEEecCCCCCC----------------------------------------CCCCC---------CCcCCChhHHHHHHH
Q psy775 1398 LLLDYDGTLAP----------------------------------------IAPHP---------DMAVLPEETKRTLQK 1428 (1460)
Q Consensus 1398 l~lD~DGTLap----------------------------------------i~~~P---------~~a~~~~~~~~~L~~ 1428 (1460)
+++||||||+. +...+ ....+.|++.+.|+.
T Consensus 2 ~~fDFDgTit~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~l~pg~~e~l~~ 81 (214)
T TIGR03333 2 IICDFDGTITNNDNIISIMKQFAPPEWEALKDGVLSKTLSIQEGVGRMFGLLPSSLKEEITSFVLETAEIREGFREFVAF 81 (214)
T ss_pred EEeccCCCCCcchhHHHHHHHhCcHHHHHHHHHHHcCCccHHHHHHHHHhhCCCchHHHHHHHHHhcCcccccHHHHHHH
Q ss_pred HhcCCCceEEEEcCCChhhHHHhc
Q psy775 1429 LANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1429 La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
|.++ +.+++||||.....+..++
T Consensus 82 l~~~-g~~~~IvS~~~~~~i~~il 104 (214)
T TIGR03333 82 INEH-GIPFYVISGGMDFFVYPLL 104 (214)
T ss_pred HHHC-CCeEEEECCCcHHHHHHHH
No 369
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=71.69 E-value=18 Score=42.33 Aligned_cols=99 Identities=10% Similarity=0.086 Sum_probs=59.6
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
.++|++..|-.|+.+.....++|+.++. +++ .+..+..+... .+ +++++.++. +. .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~----~i~vv~G~~~~---~~----~~l~~~~~~-~~--------~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAESQ---INI----SITLVTGSSNP---NL----DELKKFAKE-YP--------NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhccc---cCc----eEEEEECCCCc---CH----HHHHHHHHh-CC--------CE
Confidence 3679999999999876667777776532 232 22223333221 12 344444432 11 12
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 874 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~ 874 (1460)
. +.++ .+++..+|+.||+++.. - |.+..|++++ +-|.|+-..
T Consensus 227 ~-~~~~--~~~m~~lm~~aDl~Is~---~--G~T~~E~~a~-----g~P~i~i~~ 268 (279)
T TIGR03590 227 I-LFID--VENMAELMNEADLAIGA---A--GSTSWERCCL-----GLPSLAICL 268 (279)
T ss_pred E-EEeC--HHHHHHHHHHCCEEEEC---C--chHHHHHHHc-----CCCEEEEEe
Confidence 2 3333 46899999999999884 3 4789999999 445554443
No 370
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=71.63 E-value=1.6e+02 Score=35.52 Aligned_cols=119 Identities=13% Similarity=0.167 Sum_probs=77.9
Q ss_pred eEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEE-EcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q psy775 342 KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQI-AVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 420 (1460)
Q Consensus 342 kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqi-g~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv 420 (1460)
..|+-=-.=|++-+....|+++.++..+. +.++.. +.|+ ++ +++.++|.+.+.++ ||. ..+.
T Consensus 147 ~tIlvGNSgd~SN~Hie~L~~l~~~~~~~------v~ii~PlsYp~-gn----~~Yi~~V~~~~~~l---F~~---~~~~ 209 (322)
T PRK02797 147 MTILVGNSGDRSNRHIEALRALHQQFGDN------VKIIVPMGYPA-NN----QAYIEEVRQAGLAL---FGA---ENFQ 209 (322)
T ss_pred eEEEEeCCCCCcccHHHHHHHHHHHhCCC------eEEEEECCcCC-CC----HHHHHHHHHHHHHh---cCc---ccEE
Confidence 33333345678888988888887775432 333322 2222 22 34566776665544 542 2467
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccC-CCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcccc
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPL-RDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE 483 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSl-rEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~ 483 (1460)
.+...++.+|+.++++.||+.++.-- .+|+|..++=- .. |.++++|+-.-.-..+.+
T Consensus 210 ~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~~-----G~~v~l~r~n~fwqdl~e 267 (322)
T PRK02797 210 ILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-QL-----GKPVVLSRDNPFWQDLTE 267 (322)
T ss_pred ehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-HC-----CCcEEEecCCchHHHHHh
Confidence 77899999999999999999999875 57888765422 22 567788877766666643
No 371
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=71.29 E-value=6 Score=42.77 Aligned_cols=52 Identities=17% Similarity=0.212 Sum_probs=41.6
Q ss_pred EEEecCCCCCCC------CCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHH
Q psy775 1398 LLLDYDGTLAPI------APHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVME 1450 (1460)
Q Consensus 1398 l~lD~DGTLapi------~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~ 1450 (1460)
++.|+||||+.= .+--....+++++.+..+.+++. |..+.-+|+|+......
T Consensus 2 VvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~-GY~ilYlTaRp~~qa~~ 59 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN-GYKILYLTARPIGQANR 59 (157)
T ss_pred EEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC-CeEEEEECcCcHHHHHH
Confidence 789999999873 33333448999999999999987 67899999999876543
No 372
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=70.64 E-value=7.4 Score=44.37 Aligned_cols=42 Identities=17% Similarity=0.137 Sum_probs=34.1
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCCh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNV 1445 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~ 1445 (1460)
+++||.||||.. ...+.|++.++|++|.++ +.+++++|..+.
T Consensus 10 ~~~~D~dG~l~~------~~~~~pga~e~L~~L~~~-G~~~~ivTN~~~ 51 (242)
T TIGR01459 10 VFLLDLWGVIID------GNHTYPGAVQNLNKIIAQ-GKPVYFVSNSPR 51 (242)
T ss_pred EEEEeccccccc------CCccCccHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 688999999974 345688999999999876 679999976544
No 373
>KOG2941|consensus
Probab=69.90 E-value=1.2e+02 Score=37.05 Aligned_cols=141 Identities=13% Similarity=0.196 Sum_probs=93.4
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHH-------hCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCC
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLE-------KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFT 812 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~-------~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~ 812 (1460)
...++++--...+-..+--+|.|...+=+ .+|. ++.+.. +.++..+.+.++|+
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----llciIT-----GKGPlkE~Y~~~I~----------- 313 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----LLCIIT-----GKGPLKEKYSQEIH----------- 313 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----EEEEEc-----CCCchhHHHHHHHH-----------
Confidence 45788888888898999989999875421 2444 233322 23455556666666
Q ss_pred CCCCccEEEEcCCCCHHHHHHHHHHccEEE--ECCCccCCCccce--eeeeeccCCCCceEEEcCCCCcchhhhhhhhcC
Q psy775 813 TPNWSPIRYIYGCISQDELASFYRDAAVAL--VTPLRDGMNLVAK--EFVACQINEPPGVLIVSPFAGAGEQMHEALICN 888 (1460)
Q Consensus 813 ~~~~~pvv~~~g~v~~eel~Aly~~ADv~v--vtSlrEGmnLva~--EymAc~~~~~~g~lIlSe~aG~~~~L~~~l~vn 888 (1460)
..+|+-|.+.+-.++-|+++.++..||..| -|| .-|+-|..+ ..--| +-|+++=.|.-..+
T Consensus 314 ~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtS-SSGLDLPMKVVDMFGc-----glPvcA~~fkcl~E--------- 378 (444)
T KOG2941|consen 314 EKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTS-SSGLDLPMKVVDMFGC-----GLPVCAVNFKCLDE--------- 378 (444)
T ss_pred HhcccceeeeecccccccchhHhhccccceEeeec-CcccCcchhHHHhhcC-----CCceeeecchhHHH---------
Confidence 345677888888999999999999999655 455 456666543 33334 34555555553333
Q ss_pred cccchhhhhhhhccccCCCcchhhhhhcccCCCCceeEeccccCCcccccceEEeCCCCHHHHHHHHHHHhCC
Q psy775 889 PYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTM 961 (1460)
Q Consensus 889 P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~sef~G~~~~l~~allVnP~d~~~iA~ai~~aL~m 961 (1460)
+|+|. .++++++ |.+++|+.|..+++.
T Consensus 379 ------------------------LVkh~--------------------eNGlvF~--Ds~eLa~ql~~lf~~ 405 (444)
T KOG2941|consen 379 ------------------------LVKHG--------------------ENGLVFE--DSEELAEQLQMLFKN 405 (444)
T ss_pred ------------------------HHhcC--------------------CCceEec--cHHHHHHHHHHHHhc
Confidence 22222 4568887 999999999998883
No 374
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=69.41 E-value=5.2 Score=51.00 Aligned_cols=49 Identities=22% Similarity=0.271 Sum_probs=38.4
Q ss_pred cEEEEEecCCCCCC------CCCCCCCcC-CChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1395 KLALLLDYDGTLAP------IAPHPDMAV-LPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1395 ~~~l~lD~DGTLap------i~~~P~~a~-~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
.=++|||.||||.. ...+|++-. +.|++.++|++|.+. +..++|+|-.+
T Consensus 168 ~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~-Gy~IvIvTNQ~ 223 (526)
T TIGR01663 168 EKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD-GFKICIFTNQG 223 (526)
T ss_pred CcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC-CCEEEEEECCc
Confidence 34789999999985 344566654 589999999999775 67999999743
No 375
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=69.32 E-value=4.3 Score=43.02 Aligned_cols=54 Identities=20% Similarity=0.274 Sum_probs=37.4
Q ss_pred EEEEecCCCcCCCCCCCC--------------CccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 40 ALLLDYDGTLAPIAPHPD--------------MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~--------------~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.|+||+||||+.....+. ...+-|.+.+-|+.+++. +.++|.|..+..-+...+
T Consensus 2 ~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~--~ev~i~T~~~~~ya~~v~ 69 (159)
T PF03031_consen 2 TLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH--YEVVIWTSASEEYAEPVL 69 (159)
T ss_dssp EEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH--CEEEEE-SS-HHHHHHHH
T ss_pred EEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh--ceEEEEEeehhhhhhHHH
Confidence 689999999998665432 234678999999999877 799999998755544443
No 376
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=68.65 E-value=9.7 Score=41.80 Aligned_cols=56 Identities=23% Similarity=0.302 Sum_probs=40.7
Q ss_pred EEEEecCCCCCC----------CC-CCCC----------CcCCChhHHHHHHHHhcCCCceEEEEcCC-ChhhHHHhcC
Q psy775 1397 ALLLDYDGTLAP----------IA-PHPD----------MAVLPEETKRTLQKLANLPDVHISIISGR-NVHNVMEMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLap----------i~-~~P~----------~a~~~~~~~~~L~~La~~~~~~vAvvSGR-~~~~l~~~~~ 1453 (1460)
++.||.||||.- |. .+|. .+.+.|++.+.|+.|.+. +..++|+|+. +...+...++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~-G~~l~I~Sn~~~~~~~~~~L~ 81 (174)
T TIGR01685 4 VIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDA-GTYLATASWNDVPEWAYEILG 81 (174)
T ss_pred EEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHC-CCEEEEEeCCCChHHHHHHHH
Confidence 678999999964 22 2222 367788999999999875 6799999988 6665554433
No 377
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=68.64 E-value=2.2 Score=46.81 Aligned_cols=28 Identities=29% Similarity=0.383 Sum_probs=0.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHH
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKL 72 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L 72 (1460)
+++||+||||++ +....-....+++++.
T Consensus 2 ~viFD~DGTLiD-----s~~~~~~a~~~~~~~~ 29 (197)
T TIGR01548 2 ALVLDMDGVMAD-----VSQSYRRAIIDTVEHF 29 (197)
T ss_pred ceEEecCceEEe-----chHHHHHHHHHHHHHH
No 378
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=66.87 E-value=26 Score=43.09 Aligned_cols=97 Identities=18% Similarity=0.112 Sum_probs=58.0
Q ss_pred EcCccccC-CHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCC
Q psy775 747 VDRLDYTK-GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC 825 (1460)
Q Consensus 747 VdRLd~~K-Gi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~ 825 (1460)
=.|-..++ .++..++|.+++.+++|++ .++....+. ...+.+++.....+.. .+++..
T Consensus 192 GSR~~EI~rllP~~l~aa~~l~~~~p~l----~fvvp~a~~--------~~~~~i~~~~~~~~~~------~~~~~~--- 250 (373)
T PF02684_consen 192 GSRKSEIKRLLPIFLEAAKLLKKQRPDL----QFVVPVAPE--------VHEELIEEILAEYPPD------VSIVII--- 250 (373)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecCCH--------HHHHHHHHHHHhhCCC------CeEEEc---
Confidence 35555444 4488889999999999985 344333221 1122233333222211 112222
Q ss_pred CCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCC
Q psy775 826 ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 876 (1460)
Q Consensus 826 v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG 876 (1460)
..+.+.+++.||+.+++| |.+.+|+... +.|.|+.--.+
T Consensus 251 --~~~~~~~m~~ad~al~~S-----GTaTLE~Al~-----g~P~Vv~Yk~~ 289 (373)
T PF02684_consen 251 --EGESYDAMAAADAALAAS-----GTATLEAALL-----GVPMVVAYKVS 289 (373)
T ss_pred --CCchHHHHHhCcchhhcC-----CHHHHHHHHh-----CCCEEEEEcCc
Confidence 235667899999999999 8899999887 45656554443
No 379
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=66.80 E-value=96 Score=37.71 Aligned_cols=45 Identities=16% Similarity=0.156 Sum_probs=32.5
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 876 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG 876 (1460)
+.+.+.+++. .++..||++|. +-|.| +..|++++ +.|+|+....+
T Consensus 277 v~~~~~~p~~---~ll~~~~~~I~---hgG~~-t~~Eal~~-----G~P~v~~p~~~ 321 (392)
T TIGR01426 277 VEVRQWVPQL---EILKKADAFIT---HGGMN-STMEALFN-----GVPMVAVPQGA 321 (392)
T ss_pred eEEeCCCCHH---HHHhhCCEEEE---CCCch-HHHHHHHh-----CCCEEecCCcc
Confidence 4566788875 45788998885 45666 56999998 66777776553
No 380
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=66.44 E-value=3.7 Score=43.99 Aligned_cols=29 Identities=24% Similarity=0.327 Sum_probs=21.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPD 77 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g 77 (1460)
+++||+||||++. .+....+++++.+..|
T Consensus 1 ~iiFD~DGTL~ds---------~~~~~~~~~~~~~~~g 29 (185)
T TIGR01990 1 AVIFDLDGVITDT---------AEYHYLAWKALADELG 29 (185)
T ss_pred CeEEcCCCccccC---------hHHHHHHHHHHHHHcC
Confidence 4799999999973 2456677777776644
No 381
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=66.04 E-value=9.8 Score=40.93 Aligned_cols=58 Identities=21% Similarity=0.264 Sum_probs=42.7
Q ss_pred CCcEEEEEecCCCcCCCCCCCC------------------------------CccCChhHHHHHHHHhcCCCceEEEEeC
Q psy775 36 TNKLALLLDYDGTLAPIAPHPD------------------------------MAVLPEETKRTLQKLANLPDVHISIISG 85 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~p~------------------------------~a~ip~s~~~aL~~L~~~~g~~v~IvTG 85 (1460)
.++..+++|+|.||+.-...+. ...+-|++.+.|++|++. +.++|+|.
T Consensus 4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~--yel~I~T~ 81 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL--YEMHVYTM 81 (156)
T ss_pred CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh--cEEEEEeC
Confidence 4688999999999998544431 122467899999999965 89999999
Q ss_pred Cchhhhhhhh
Q psy775 86 RNVHNVMEMV 95 (1460)
Q Consensus 86 R~~~~l~~~l 95 (1460)
-+..-+...+
T Consensus 82 ~~~~yA~~vl 91 (156)
T TIGR02250 82 GTRAYAQAIA 91 (156)
T ss_pred CcHHHHHHHH
Confidence 8755544443
No 382
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=65.88 E-value=11 Score=42.72 Aligned_cols=58 Identities=22% Similarity=0.338 Sum_probs=39.6
Q ss_pred CCCcEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhH---HHhcCCCC
Q psy775 1392 TTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNV---MEMVGIEG 1456 (1460)
Q Consensus 1392 ~~~~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l---~~~~~~~~ 1456 (1460)
.....++|+|+||||.|-.-+|+ + +...+.+|-.. |++|..+|-.+..+. +.-+|+++
T Consensus 4 ~~~~~lIFtDlD~TLl~~~ye~~---p---A~pv~~el~d~-G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 4 IQMPLLIFTDLDGTLLPHSYEWQ---P---AAPVLLELKDA-GVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred cccceEEEEcccCcccCCCCCCC---c---cchHHHHHHHc-CCeEEEeccchHHHHHHHHHhcCCCC
Confidence 35677999999999999444443 2 23345555443 679999999998764 45566663
No 383
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=64.85 E-value=3.8 Score=44.94 Aligned_cols=30 Identities=23% Similarity=0.241 Sum_probs=20.2
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDV 78 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~ 78 (1460)
+|+||+||||++.. +...++++++.+..|.
T Consensus 2 ~viFDlDGTL~d~~---------~~~~~a~~~~~~~~g~ 31 (203)
T TIGR02252 2 LITFDAVGTLLALK---------EPVGEVYCEIARKYGV 31 (203)
T ss_pred eEEEecCCceeeeC---------CCHHHHHHHHHHHhCC
Confidence 68999999999842 3445566655555454
No 384
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=64.66 E-value=3.2 Score=44.77 Aligned_cols=30 Identities=17% Similarity=0.358 Sum_probs=19.8
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDV 78 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~ 78 (1460)
+++||+||||++. -+...++++++.+..|.
T Consensus 7 ~viFD~DGTLiDs---------~~~~~~a~~~~~~~~g~ 36 (188)
T PRK10725 7 GLIFDMDGTILDT---------EPTHRKAWREVLGRYGL 36 (188)
T ss_pred EEEEcCCCcCccC---------HHHHHHHHHHHHHHcCC
Confidence 6899999999973 12345555555554453
No 385
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=64.66 E-value=20 Score=41.92 Aligned_cols=93 Identities=12% Similarity=0.114 Sum_probs=57.5
Q ss_pred CCeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccE
Q psy775 340 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419 (1460)
Q Consensus 340 ~~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pI 419 (1460)
.+++++..|-.|+.+.....++|+.++. +++ .+..+..+... .++++++. +.. +. .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~----~i~vv~G~~~~---~~~~l~~~----~~~-~~--------~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAESQ---INI----SITLVTGSSNP---NLDELKKF----AKE-YP--------NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhccc---cCc----eEEEEECCCCc---CHHHHHHH----HHh-CC--------CE
Confidence 3679999999999887778888886542 232 12223333222 22333333 221 11 13
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccC
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQIN 463 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~ 463 (1460)
.+ .+ ..+++..+|+.||+++.+ -|.+..|+++|+.|
T Consensus 227 ~~-~~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P 262 (279)
T TIGR03590 227 IL-FI--DVENMAELMNEADLAIGA-----AGSTSWERCCLGLP 262 (279)
T ss_pred EE-Ee--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcCCC
Confidence 32 23 356889999999999884 45899999999554
No 386
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=63.78 E-value=7.2 Score=42.55 Aligned_cols=57 Identities=16% Similarity=0.168 Sum_probs=36.8
Q ss_pred EEEEecCCCCCC--CCCCCCCcCC---ChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcCC
Q psy775 1397 ALLLDYDGTLAP--IAPHPDMAVL---PEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 1454 (1460)
Q Consensus 1397 ~l~lD~DGTLap--i~~~P~~a~~---~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~~ 1454 (1460)
++.||+||||++ |.-+++...+ +-.=--+++.|.+. ++++||+|+++..-+++.+.-
T Consensus 9 ~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~-Gi~laIiT~k~~~~~~~~l~~ 70 (169)
T TIGR02726 9 LVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLC-GIDVAIITSKKSGAVRHRAEE 70 (169)
T ss_pred EEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHC-CCEEEEEECCCcHHHHHHHHH
Confidence 788999999998 3333443321 11122345555543 579999999998877766543
No 387
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=62.92 E-value=13 Score=40.13 Aligned_cols=55 Identities=15% Similarity=0.140 Sum_probs=40.7
Q ss_pred EEEEEecCCCcCCCCCCCCC-------------------ccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 39 LALLLDYDGTLAPIAPHPDM-------------------AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~~~p~~-------------------a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
..|++|+|+||+.-...+.. ...-|++.+.|..|++. +.++|.|--+...+...+
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~--yei~I~Ts~~~~yA~~il 75 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW--YELVIFTASLEEYADPVL 75 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc--CEEEEEcCCcHHHHHHHH
Confidence 46899999999976555522 13568899999999987 789999876655444444
No 388
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=62.11 E-value=8.7 Score=38.98 Aligned_cols=69 Identities=16% Similarity=0.048 Sum_probs=36.1
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCCcHHHH-----hhhccCceeeeccHHhHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEIL-----QGMLGCDMVGFHIEDYCLN 285 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~r~eil-----~gLL~aDlIgF~t~~yar~ 285 (1460)
+-|+|.+|+++..+++..+++.. +.++.+.+|-.+.... .++...++ ..+-.||.|-..+....+.
T Consensus 73 ~~Dvv~~~~~~~~~~~~~~~~~~-----~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 143 (160)
T PF13579_consen 73 RPDVVHAHSPTAGLVAALARRRR-----GIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRY 143 (160)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHH-----T--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHH
T ss_pred CCeEEEecccchhHHHHHHHHcc-----CCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 57999999998888887777432 5889999996332211 12222222 3333467777666666555
Q ss_pred HHH
Q psy775 286 FVD 288 (1460)
Q Consensus 286 FL~ 288 (1460)
+.+
T Consensus 144 l~~ 146 (160)
T PF13579_consen 144 LRR 146 (160)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 389
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=61.18 E-value=8.5 Score=40.75 Aligned_cols=54 Identities=20% Similarity=0.262 Sum_probs=39.8
Q ss_pred EEEEecCCCCCCCCCCCC--------------CcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1397 ALLLDYDGTLAPIAPHPD--------------MAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~--------------~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
.|+||.||||.--...+. .+..-|.+.+-|+.+++.+ .++|.|..+..-+...+
T Consensus 2 ~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~--ev~i~T~~~~~ya~~v~ 69 (159)
T PF03031_consen 2 TLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKHY--EVVIWTSASEEYAEPVL 69 (159)
T ss_dssp EEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHHC--EEEEE-SS-HHHHHHHH
T ss_pred EEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHhc--eEEEEEeehhhhhhHHH
Confidence 589999999998777653 2446789999999999987 78999998876665544
No 390
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=61.18 E-value=12 Score=43.05 Aligned_cols=51 Identities=24% Similarity=0.242 Sum_probs=31.5
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEE--cCCChhhHHHhcC
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISII--SGRNVHNVMEMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvv--SGR~~~~l~~~~~ 1453 (1460)
++++|.||||..= +. +-|++.++|++|.+.-...+.+- |||+...+.+.+.
T Consensus 3 ~~~~D~DGtl~~~----~~--~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~ 55 (249)
T TIGR01457 3 GYLIDLDGTMYKG----KE--RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLA 55 (249)
T ss_pred EEEEeCCCceEcC----Ce--eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence 5889999999742 12 23478999999987621000000 0488888766543
No 391
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=60.90 E-value=3.8 Score=43.76 Aligned_cols=27 Identities=26% Similarity=0.365 Sum_probs=19.2
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANL 75 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~ 75 (1460)
+++||+||||++.. +...++++.+.+.
T Consensus 1 ~viFD~DGTL~D~~---------~~~~~~~~~~~~~ 27 (175)
T TIGR01493 1 AMVFDVYGTLVDVH---------GGVRACLAAIAPE 27 (175)
T ss_pred CeEEecCCcCcccH---------HHHHHHHHHhhhh
Confidence 58999999999842 3556666666544
No 392
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=59.34 E-value=10 Score=45.50 Aligned_cols=39 Identities=18% Similarity=0.214 Sum_probs=27.4
Q ss_pred CCChhHHHHHHHHhcCCCceEEEEcCCC---hhhHHHhcCCCC
Q psy775 1417 VLPEETKRTLQKLANLPDVHISIISGRN---VHNVMEMVGIEG 1456 (1460)
Q Consensus 1417 ~~~~~~~~~L~~La~~~~~~vAvvSGR~---~~~l~~~~~~~~ 1456 (1460)
.+.|++++.|+.|.+. +..++|+||-. .+.+.+.+|++.
T Consensus 181 ~l~pGa~elL~~Lk~~-G~~~aIvSgg~~~~~~~l~~~Lgld~ 222 (322)
T PRK11133 181 PLMPGLTELVLKLQAL-GWKVAIASGGFTYFADYLRDKLRLDA 222 (322)
T ss_pred CCChhHHHHHHHHHHc-CCEEEEEECCcchhHHHHHHHcCCCe
Confidence 4556677777777654 56899999977 456666677754
No 393
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=58.78 E-value=19 Score=41.26 Aligned_cols=55 Identities=25% Similarity=0.238 Sum_probs=41.6
Q ss_pred CCCcEEEEEecCCCCCC---------CCC------------CCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhh
Q psy775 1392 TTNKLALLLDYDGTLAP---------IAP------------HPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 1447 (1460)
Q Consensus 1392 ~~~~~~l~lD~DGTLap---------i~~------------~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~ 1447 (1460)
...+.++.||+|-|+.. ... .-..+.+-|++.++++.|.++ |+.|.++|||+-..
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~-G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIEL-GIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHC-CCEEEEEcCCChHH
Confidence 34678999999999765 111 123567778899999998876 67899999999644
No 394
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=58.25 E-value=7.5 Score=42.02 Aligned_cols=13 Identities=38% Similarity=0.588 Sum_probs=11.4
Q ss_pred EEEEecCCCcCCC
Q psy775 40 ALLLDYDGTLAPI 52 (1460)
Q Consensus 40 ~lFfDiDGTL~~~ 52 (1460)
+++||+||||++.
T Consensus 2 ~viFDlDGTL~ds 14 (184)
T TIGR01993 2 VWFFDLDNTLYPH 14 (184)
T ss_pred eEEEeCCCCCCCC
Confidence 5899999999973
No 395
>PRK11587 putative phosphatase; Provisional
Probab=58.24 E-value=4.7 Score=45.01 Aligned_cols=28 Identities=21% Similarity=0.355 Sum_probs=0.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHH
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKL 72 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L 72 (1460)
+++||+||||++ +.........+++++.
T Consensus 5 ~viFDlDGTL~D-----s~~~~~~a~~~~~~~~ 32 (218)
T PRK11587 5 GFLFDLDGTLVD-----SLPAVERAWSNWADRH 32 (218)
T ss_pred EEEEcCCCCcCc-----CHHHHHHHHHHHHHHc
No 396
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=57.17 E-value=1.6e+02 Score=38.08 Aligned_cols=103 Identities=14% Similarity=0.062 Sum_probs=72.3
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
.+-.|+++..+. .|=.++.+.-+-+.|+.-|+. +|+..+.+. ..+..+.++.++++-.-. ..-
T Consensus 428 ~~avVf~c~~n~--~K~~pev~~~wmqIL~~vP~S----vl~L~~~~~------~~~~~~~l~~la~~~Gv~-----~eR 490 (620)
T COG3914 428 EDAVVFCCFNNY--FKITPEVFALWMQILSAVPNS----VLLLKAGGD------DAEINARLRDLAEREGVD-----SER 490 (620)
T ss_pred CCeEEEEecCCc--ccCCHHHHHHHHHHHHhCCCc----EEEEecCCC------cHHHHHHHHHHHHHcCCC-----hhh
Confidence 566677777764 566788888889999999986 455555441 124556666666654322 122
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeee
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 860 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc 860 (1460)
..|.+..+.++..|-|+.||+++.|--+-| ..++.|++-.
T Consensus 491 -L~f~p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm 530 (620)
T COG3914 491 -LRFLPPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM 530 (620)
T ss_pred -eeecCCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh
Confidence 345667888899999999999999988877 5677887654
No 397
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=56.67 E-value=5.5 Score=44.18 Aligned_cols=12 Identities=50% Similarity=0.811 Sum_probs=11.2
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
++.||+||||++
T Consensus 5 ~viFD~DGTL~d 16 (214)
T PRK13288 5 TVLFDLDGTLIN 16 (214)
T ss_pred EEEEeCCCcCcc
Confidence 789999999997
No 398
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=55.91 E-value=23 Score=42.38 Aligned_cols=56 Identities=18% Similarity=0.208 Sum_probs=43.8
Q ss_pred EEEEecCCCCCCCC--CC-CCCc---CCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhcC
Q psy775 1397 ALLLDYDGTLAPIA--PH-PDMA---VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~--~~-P~~a---~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~~ 1453 (1460)
++++|+|+||..=+ ++ +... .+.+++.+.|++|.++ |+.+||+|..+...+.+.+.
T Consensus 5 ~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~-Gi~lai~S~n~~~~a~~~l~ 66 (320)
T TIGR01686 5 VLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ-GFLLALASKNDEDDAKKVFE 66 (320)
T ss_pred EEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHH
Confidence 68899999999854 22 2222 2458899999999876 78999999999988887654
No 399
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=55.74 E-value=19 Score=42.31 Aligned_cols=53 Identities=28% Similarity=0.332 Sum_probs=39.3
Q ss_pred CCcEEEEEecCCCCCC---------CCCC-------------CCCcCCChhHHHHHHHHhcCCCceEEEEcCCChh
Q psy775 1393 TNKLALLLDYDGTLAP---------IAPH-------------PDMAVLPEETKRTLQKLANLPDVHISIISGRNVH 1446 (1460)
Q Consensus 1393 ~~~~~l~lD~DGTLap---------i~~~-------------P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~ 1446 (1460)
..+-++.||+|+|+.. .-.. -..|.+-|++.+..+.+.++ |+.|.+||||+-.
T Consensus 99 ~~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~-G~kIf~VSgR~e~ 173 (275)
T TIGR01680 99 HEKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSL-GFKIIFLSGRLKD 173 (275)
T ss_pred CCCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHC-CCEEEEEeCCchh
Confidence 3567999999999882 1111 11566778888989888776 6789999999854
No 400
>KOG2116|consensus
Probab=55.54 E-value=14 Score=47.48 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=49.3
Q ss_pred EEEEecCCCcCCC------CCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhh---hh-ccccceeEccCCcc
Q psy775 40 ALLLDYDGTLAPI------APHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVME---MV-GIEGLTYAGNHGLE 109 (1460)
Q Consensus 40 ~lFfDiDGTL~~~------~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~---~l-~~~~~~~ig~hGae 109 (1460)
+|.-|||||++-- -+--..-.-..++.+.-.++.+| ||++.-+|-|++.+..- .+ .+.-.+++.-.|=.
T Consensus 532 IVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~N-GYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPV 610 (738)
T KOG2116|consen 532 IVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKEN-GYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPV 610 (738)
T ss_pred EEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhC-CeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCE
Confidence 7789999999751 11112233456788899999999 99999999999776532 22 12233444555556
Q ss_pred cccCCC
Q psy775 110 IIHPDG 115 (1460)
Q Consensus 110 i~~~g~ 115 (1460)
+..+++
T Consensus 611 iLSPd~ 616 (738)
T KOG2116|consen 611 ILSPDS 616 (738)
T ss_pred EeCCCc
Confidence 666554
No 401
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=55.10 E-value=7.8 Score=42.96 Aligned_cols=31 Identities=19% Similarity=0.242 Sum_probs=0.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCce
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVH 79 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~ 79 (1460)
+++||+||||++ -.+....++..+.+..|..
T Consensus 8 ~iiFD~DGTL~d---------~~~~~~~~~~~~~~~~~~~ 38 (226)
T PRK13222 8 AVAFDLDGTLVD---------SAPDLAAAVNAALAALGLP 38 (226)
T ss_pred EEEEcCCccccc---------CHHHHHHHHHHHHHHCCCC
No 402
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=54.98 E-value=8.1 Score=43.01 Aligned_cols=29 Identities=24% Similarity=0.236 Sum_probs=19.4
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCC
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPD 77 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g 77 (1460)
+++||+||||++.. +...+++.+..+..|
T Consensus 6 ~viFD~DGTL~d~~---------~~~~~a~~~~~~~~g 34 (221)
T PRK10563 6 AVFFDCDGTLVDSE---------VICSRAYVTMFAEFG 34 (221)
T ss_pred EEEECCCCCCCCCh---------HHHHHHHHHHHHHcC
Confidence 78999999999731 233566666655544
No 403
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=54.97 E-value=78 Score=38.44 Aligned_cols=237 Identities=11% Similarity=0.068 Sum_probs=112.0
Q ss_pred CCCEEEEeCcchhHHHHHHHhhhhccCCCceEEEEEecCCCCccccccCCC--cHHHHhhhccCceeeeccHHhHHHHHH
Q psy775 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPW--SDEILQGMLGCDMVGFHIEDYCLNFVD 288 (1460)
Q Consensus 211 ~gDvVwIHDYhL~llP~~LR~~~p~~~~~~~IgfFlHiPFPs~eifr~LP~--r~eil~gLL~aDlIgF~t~~yar~FL~ 288 (1460)
..|+|.||.=-.-.++.-+-... .+++|+. +|----+.|...-.|. .+.++..| ||+----+..+.++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~----~~ipv~H-ieaGlRs~d~~~g~~de~~R~~i~~l--a~lhf~~t~~~~~~L~~ 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFY----LNIPVAH-IEAGLRSGDRTEGMPDEINRHAIDKL--AHLHFAPTEEARERLLQ 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHH----TT-EEEE-ES-----S-TTSSTTHHHHHHHHHHH---SEEEESSHHHHHHHHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHH----hCCCEEE-ecCCCCccccCCCCchhhhhhhhhhh--hhhhccCCHHHHHHHHh
Confidence 46999999888877776665432 2455432 1212222232212221 12222232 56555556666666665
Q ss_pred HHHhhcCceecCCCcEEEECCeEEEEEEeecccCchhhhh-hhccch---hhh-ccCCeEEE-EecCccc---cCCHHHH
Q psy775 289 CCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQ-LAQAAP---RVI-DTKQKIVL-GVDRLDY---TKGLVHR 359 (1460)
Q Consensus 289 ~~~riLg~~~~~~~~~i~~~Gr~vkV~viPiGID~~~f~~-~~~~~~---~~~-~~~~kvIL-~VgRLd~---~KGI~~l 359 (1460)
.|.+.. + +. .+-..++|.-.... ...... .+. ...++++| ..=|... .......
T Consensus 140 -----~G~~~~--r--I~--------~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i 202 (346)
T PF02350_consen 140 -----EGEPPE--R--IF--------VVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQI 202 (346)
T ss_dssp -----TT--GG--G--EE--------E---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHH
T ss_pred -----cCCCCC--e--EE--------EEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHH
Confidence 232111 1 11 12345566432211 111111 221 13444444 4433333 3446778
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q psy775 360 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAA 439 (1460)
Q Consensus 360 L~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~v~~eeL~aLY~aAD 439 (1460)
.+++..+.+. +++ .++....++ + ...+.+.+...+++ .+. +..+++..++.++++.|+
T Consensus 203 ~~~l~~L~~~-~~~----~vi~~~hn~----p---~~~~~i~~~l~~~~---------~v~-~~~~l~~~~~l~ll~~a~ 260 (346)
T PF02350_consen 203 LEALKALAER-QNV----PVIFPLHNN----P---RGSDIIIEKLKKYD---------NVR-LIEPLGYEEYLSLLKNAD 260 (346)
T ss_dssp HHHHHHHHHH-TTE----EEEEE--S-----H---HHHHHHHHHHTT-T---------TEE-EE----HHHHHHHHHHES
T ss_pred HHHHHHHHhc-CCC----cEEEEecCC----c---hHHHHHHHHhcccC---------CEE-EECCCCHHHHHHHHhcce
Confidence 8888888777 443 333333211 1 22233333222221 233 458899999999999999
Q ss_pred EEEEccCCCCCCccee-eeeeeccCCCCCeEEEcCCCCchhcc---cccEEECCCCHHHHHHHHHHHcCC
Q psy775 440 VALVTPLRDGMNLVAK-EFVACQINEPPGVLIVSPFAGAGEQM---HEALICNPYEIDAAAEVIHRALTM 505 (1460)
Q Consensus 440 V~VvpSlrEGfnLVal-EamAcq~~~~~GvlVlSe~aGaa~~L---~~allVNP~D~~elA~AI~~aL~m 505 (1460)
++|-.|- ... ||..++.| +|.=...|-.++. +..++|. .|.+++.+||.+++..
T Consensus 261 ~vvgdSs------GI~eEa~~lg~P-----~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 261 LVVGDSS------GIQEEAPSLGKP-----VVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp EEEESSH------HHHHHGGGGT-------EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EEEEcCc------cHHHHHHHhCCe-----EEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 9998872 344 99988444 3544455555554 3466775 7999999999999875
No 404
>PLN02954 phosphoserine phosphatase
Probab=54.78 E-value=6.4 Score=43.82 Aligned_cols=12 Identities=33% Similarity=0.456 Sum_probs=0.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 14 ~viFDfDGTL~~ 25 (224)
T PLN02954 14 AVCFDVDSTVCV 25 (224)
T ss_pred EEEEeCCCcccc
No 405
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=54.54 E-value=14 Score=40.57 Aligned_cols=45 Identities=24% Similarity=0.256 Sum_probs=29.3
Q ss_pred EEEEecCCCCCCCCCC--------------------CCCcCCChhHHHHHHHHhcCCCceEEEEcC
Q psy775 1397 ALLLDYDGTLAPIAPH--------------------PDMAVLPEETKRTLQKLANLPDVHISIISG 1442 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~--------------------P~~a~~~~~~~~~L~~La~~~~~~vAvvSG 1442 (1460)
+++||.|+||-|.--+ -+.....|+++.+|+.|..+ ++.+|+.|=
T Consensus 5 lvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~-gv~lavASR 69 (169)
T PF12689_consen 5 LVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKER-GVKLAVASR 69 (169)
T ss_dssp EEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHC-T--EEEEE-
T ss_pred EEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHC-CCEEEEEEC
Confidence 7899999999983221 22356778999999999984 789999993
No 406
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=54.22 E-value=6 Score=49.57 Aligned_cols=63 Identities=19% Similarity=0.271 Sum_probs=0.0
Q ss_pred cchhHhhhccccccccCCCChhhHHHHHHHhhcCCCcE-----EEEEecCCCcCCCCCCCCCccCChhHHHHHHHH
Q psy775 2 EDFDEYLSKNELFILKGMGTLEDFDEYLSKYIGTTNKL-----ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKL 72 (1460)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L 72 (1460)
++|++|++..+..+. .-+..+-+-+.+.-...++- +++||+||||++ +.........++++++
T Consensus 203 ~~~~~~~~~a~~~~~---~~v~~~l~~~~~~~~~~~~~~~m~k~vIFDlDGTLiD-----s~~~~~~a~~~~~~~~ 270 (459)
T PRK06698 203 ISYDDFAKTAANYCS---EIIVEMLKTISSKTYSSKGENEMLQALIFDMDGTLFQ-----TDKILELSLDDTFDHL 270 (459)
T ss_pred cCHHHHHHHHHHHHH---HHHHHHHHHhccccccccchHHhhhheeEccCCceec-----chhHHHHHHHHHHHHH
No 407
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=54.15 E-value=4.7e+02 Score=31.55 Aligned_cols=9 Identities=11% Similarity=0.431 Sum_probs=6.7
Q ss_pred chhhhhhhH
Q psy775 536 TSAYAQVNQ 544 (1460)
Q Consensus 536 ~~~Y~~VNq 544 (1460)
|..|.-.|.
T Consensus 289 ~~~~~pl~e 297 (311)
T PF06258_consen 289 WTPYEPLDE 297 (311)
T ss_pred cccCCCccH
Confidence 777877775
No 408
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=54.10 E-value=38 Score=41.49 Aligned_cols=93 Identities=15% Similarity=0.136 Sum_probs=55.6
Q ss_pred cccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCCCCHHH
Q psy775 751 DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDE 830 (1460)
Q Consensus 751 d~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~v~~ee 830 (1460)
+-..-++--++|++++.+++|+.+ ++ .|.-. +.|+..+.+ ....-.. .+..++ ...+
T Consensus 201 EI~rl~~~f~~a~~~l~~~~~~~~----~v---lp~~~--~~~~~~~~~---~~~~~~~-------~~~~~~----~~~~ 257 (381)
T COG0763 201 EIRRLLPPFVQAAQELKARYPDLK----FV---LPLVN--AKYRRIIEE---ALKWEVA-------GLSLIL----IDGE 257 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCce----EE---EecCc--HHHHHHHHH---Hhhcccc-------CceEEe----cCch
Confidence 344556667788889888999963 22 22211 233333222 2211110 112333 3345
Q ss_pred HHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCC
Q psy775 831 LASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 876 (1460)
Q Consensus 831 l~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG 876 (1460)
....|.+||+.+..| |.+.+|++.| +.|.|++--..
T Consensus 258 ~~~a~~~aD~al~aS-----GT~tLE~aL~-----g~P~Vv~Yk~~ 293 (381)
T COG0763 258 KRKAFAAADAALAAS-----GTATLEAALA-----GTPMVVAYKVK 293 (381)
T ss_pred HHHHHHHhhHHHHhc-----cHHHHHHHHh-----CCCEEEEEecc
Confidence 566799999999999 8999999999 56777765443
No 409
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=54.00 E-value=6.6 Score=42.10 Aligned_cols=12 Identities=33% Similarity=0.750 Sum_probs=0.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 3 ~iiFD~DGTL~d 14 (185)
T TIGR02009 3 AVIFDMDGVIVD 14 (185)
T ss_pred eEEEcCCCcccC
No 410
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=53.27 E-value=23 Score=38.15 Aligned_cols=58 Identities=21% Similarity=0.252 Sum_probs=44.0
Q ss_pred CCcEEEEEecCCCCCCCCCCCC------------------------------CcCCChhHHHHHHHHhcCCCceEEEEcC
Q psy775 1393 TNKLALLLDYDGTLAPIAPHPD------------------------------MAVLPEETKRTLQKLANLPDVHISIISG 1442 (1460)
Q Consensus 1393 ~~~~~l~lD~DGTLapi~~~P~------------------------------~a~~~~~~~~~L~~La~~~~~~vAvvSG 1442 (1460)
.+++.|+||.|.||..=...|. .+.+-|++.+.|++|++.+ .++|+|.
T Consensus 4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~y--el~I~T~ 81 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLY--EMHVYTM 81 (156)
T ss_pred CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhc--EEEEEeC
Confidence 5688999999999988444431 1234689999999999875 7899998
Q ss_pred CChhhHHHhc
Q psy775 1443 RNVHNVMEMV 1452 (1460)
Q Consensus 1443 R~~~~l~~~~ 1452 (1460)
-+..-+.+.+
T Consensus 82 ~~~~yA~~vl 91 (156)
T TIGR02250 82 GTRAYAQAIA 91 (156)
T ss_pred CcHHHHHHHH
Confidence 8876665544
No 411
>PRK08238 hypothetical protein; Validated
Probab=53.01 E-value=20 Score=45.38 Aligned_cols=39 Identities=8% Similarity=0.001 Sum_probs=30.7
Q ss_pred CCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHh
Q psy775 1412 HPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 1451 (1460)
Q Consensus 1412 ~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~ 1451 (1460)
||+.....|++.+.|+++.+. |.+++|+||.+..-++..
T Consensus 67 d~~~lp~~pga~e~L~~lk~~-G~~v~LaTas~~~~a~~i 105 (479)
T PRK08238 67 DVATLPYNEEVLDYLRAERAA-GRKLVLATASDERLAQAV 105 (479)
T ss_pred ChhhCCCChhHHHHHHHHHHC-CCEEEEEeCCCHHHHHHH
Confidence 555555678999999999776 569999999988766643
No 412
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=52.31 E-value=7.6 Score=44.16 Aligned_cols=13 Identities=46% Similarity=0.447 Sum_probs=11.8
Q ss_pred EEEEecCCCcCCC
Q psy775 40 ALLLDYDGTLAPI 52 (1460)
Q Consensus 40 ~lFfDiDGTL~~~ 52 (1460)
+++||+||||++.
T Consensus 12 ~iiFDlDGTL~D~ 24 (238)
T PRK10748 12 ALTFDLDDTLYDN 24 (238)
T ss_pred eEEEcCcccccCC
Confidence 7999999999984
No 413
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=52.14 E-value=7.7 Score=43.02 Aligned_cols=12 Identities=33% Similarity=0.523 Sum_probs=0.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 16 ~iiFD~DGTL~~ 27 (219)
T TIGR00338 16 LVVFDMDSTLIN 27 (219)
T ss_pred EEEEeCcccCCC
No 414
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=51.88 E-value=9.9 Score=44.31 Aligned_cols=30 Identities=17% Similarity=0.234 Sum_probs=0.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCc
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDV 78 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~ 78 (1460)
+++||+||||++ -.+....++..+.+..|.
T Consensus 15 ~viFDlDGTL~D---------s~~~~~~a~~~~~~~~g~ 44 (272)
T PRK13223 15 LVMFDLDGTLVD---------SVPDLAAAVDRMLLELGR 44 (272)
T ss_pred EEEEcCCCcccc---------CHHHHHHHHHHHHHHcCC
No 415
>PHA02597 30.2 hypothetical protein; Provisional
Probab=51.83 E-value=7 Score=42.72 Aligned_cols=13 Identities=38% Similarity=0.575 Sum_probs=11.8
Q ss_pred EEEEecCCCcCCC
Q psy775 40 ALLLDYDGTLAPI 52 (1460)
Q Consensus 40 ~lFfDiDGTL~~~ 52 (1460)
++.||+||||+++
T Consensus 4 ~viFDlDGTLiD~ 16 (197)
T PHA02597 4 TILTDVDGVLLSW 16 (197)
T ss_pred EEEEecCCceEch
Confidence 6899999999984
No 416
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=51.55 E-value=94 Score=37.89 Aligned_cols=114 Identities=14% Similarity=0.155 Sum_probs=73.5
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
++..|+-=-.-|++-+....|++..+.+.+ + +. |.+|- +.+..+++|.+++.+.+.++ ||.. -+
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~~--~----~k---IivPL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~ 247 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFGD--D----VK---IIVPL-SYGANNQAYIQQVIQAGKEL---FGAE---NF 247 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcCC--C----eE---EEEEC-CCCCchHHHHHHHHHHHHHh---cCcc---ce
Confidence 344444445668888888777776654321 2 22 22332 12222456777777666655 3322 24
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCc-cCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLR-DGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlr-EGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
..+...++.+|+.++++.+|++++...| .|||-.++= +.+ |.++++|+-.
T Consensus 248 ~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lL-l~~-----G~~v~L~~~n 298 (360)
T PF07429_consen 248 QILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLL-LQL-----GKKVFLSRDN 298 (360)
T ss_pred eEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHH-HHc-----CCeEEEecCC
Confidence 5668899999999999999999999975 788876542 223 5688888854
No 417
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=51.26 E-value=10 Score=42.77 Aligned_cols=31 Identities=26% Similarity=0.313 Sum_probs=0.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCce
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVH 79 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~ 79 (1460)
++.||+||||++ -.+...++++.+.++.|..
T Consensus 14 ~viFD~DGTL~D---------s~~~~~~a~~~~~~~~g~~ 44 (229)
T PRK13226 14 AVLFDLDGTLLD---------SAPDMLATVNAMLAARGRA 44 (229)
T ss_pred EEEEcCcCcccc---------CHHHHHHHHHHHHHHCCCC
No 418
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=51.05 E-value=28 Score=37.51 Aligned_cols=55 Identities=15% Similarity=0.128 Sum_probs=42.2
Q ss_pred EEEEEecCCCCCCCCCCCCC-------------------cCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHHhc
Q psy775 1396 LALLLDYDGTLAPIAPHPDM-------------------AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1396 ~~l~lD~DGTLapi~~~P~~-------------------a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
..|+||.|+||..-...|.. +..-|++.+.|+.|++.+ .++|.|--+..-++..+
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~y--ei~I~Ts~~~~yA~~il 75 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWY--ELVIFTASLEEYADPVL 75 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcC--EEEEEcCCcHHHHHHHH
Confidence 46899999999987666632 245688999999999985 78999877766555444
No 419
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=50.60 E-value=1.9e+02 Score=35.10 Aligned_cols=45 Identities=16% Similarity=0.215 Sum_probs=32.7
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 876 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG 876 (1460)
+.+.+.+++.+ ++..||++| .+.|+| +..|++++ +-|+|+-.+.+
T Consensus 290 v~~~~~~p~~~---ll~~~d~~I---~hgG~~-t~~eal~~-----GvP~v~~P~~~ 334 (401)
T cd03784 290 VRVVDFVPHDW---LLPRCAAVV---HHGGAG-TTAAALRA-----GVPQLVVPFFG 334 (401)
T ss_pred eEEeCCCCHHH---Hhhhhheee---ecCCch-hHHHHHHc-----CCCEEeeCCCC
Confidence 56677787765 477799998 567765 66899998 56777776654
No 420
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=50.43 E-value=7.8 Score=44.40 Aligned_cols=28 Identities=32% Similarity=0.409 Sum_probs=0.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHH
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKL 72 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L 72 (1460)
+++||+||||++ +....-....+++++.
T Consensus 24 ~viFDlDGTLiD-----s~~~~~~a~~~~~~~~ 51 (248)
T PLN02770 24 AVLFDVDGTLCD-----SDPLHYYAFREMLQEI 51 (248)
T ss_pred EEEEcCCCccCc-----CHHHHHHHHHHHHHHh
No 421
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=50.35 E-value=62 Score=38.81 Aligned_cols=128 Identities=15% Similarity=0.127 Sum_probs=78.7
Q ss_pred CCCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCC---hhHHHHHHHHHHHHHHHHhccCC---
Q psy775 739 TKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTD---VKEYQDLKEEMDQLVGRINGRFT--- 812 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~---~~~y~~l~~el~~lv~~IN~~~~--- 812 (1460)
.+..++.-.+-+.+..--. +-.|-+++..+.+....+.+.|.||.+++.- .+....+.+++.++++.-+.+.-
T Consensus 111 ~~~Nvl~t~ga~~~i~~~~-l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vtt 189 (311)
T PF06258_consen 111 RGPNVLPTLGAPNRITPER-LAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTT 189 (311)
T ss_pred CCCceEecccCCCcCCHHH-HHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence 4566777777777765433 2345556666666666778888888887653 23334555556655554441110
Q ss_pred ---C-----------CCCccEE-EEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCC
Q psy775 813 ---T-----------PNWSPIR-YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 876 (1460)
Q Consensus 813 ---~-----------~~~~pvv-~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG 876 (1460)
| ..-.+-+ ++ ..-+..=+.+++..||.++||. |..|++ -||+++ +.||.+-+..+
T Consensus 190 SRRTp~~~~~~L~~~~~~~~~~~~~-~~~~~nPy~~~La~ad~i~VT~--DSvSMv-sEA~~t-----G~pV~v~~l~~ 259 (311)
T PF06258_consen 190 SRRTPPEAEAALRELLKDNPGVYIW-DGTGENPYLGFLAAADAIVVTE--DSVSMV-SEAAAT-----GKPVYVLPLPG 259 (311)
T ss_pred CCCCcHHHHHHHHHhhcCCCceEEe-cCCCCCcHHHHHHhCCEEEEcC--ccHHHH-HHHHHc-----CCCEEEecCCC
Confidence 0 0011333 33 3334445889999999999998 888876 499887 56666666666
No 422
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=50.08 E-value=16 Score=42.08 Aligned_cols=36 Identities=22% Similarity=0.222 Sum_probs=20.5
Q ss_pred CCChhHHHHHHHHhc-CCCceEEEEcCCChhhHHHhc
Q psy775 1417 VLPEETKRTLQKLAN-LPDVHISIISGRNVHNVMEMV 1452 (1460)
Q Consensus 1417 ~~~~~~~~~L~~La~-~~~~~vAvvSGR~~~~l~~~~ 1452 (1460)
.+.|+|.++++.+++ ..++.++|||-=.--.+...+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL 107 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETIL 107 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHH
Confidence 345566666677753 345677777765544444433
No 423
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=49.77 E-value=10 Score=40.53 Aligned_cols=17 Identities=29% Similarity=0.561 Sum_probs=0.0
Q ss_pred cEEEEEecCCCcCCCCC
Q psy775 38 KLALLLDYDGTLAPIAP 54 (1460)
Q Consensus 38 ~~~lFfDiDGTL~~~~~ 54 (1460)
+.+++||+||||++...
T Consensus 1 ~~~iiFD~dgTL~~~~~ 17 (188)
T TIGR01489 1 KVVVVSDFDGTITLNDS 17 (188)
T ss_pred CeEEEEeCCCcccCCCc
No 424
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=49.46 E-value=3.3e+02 Score=34.48 Aligned_cols=50 Identities=16% Similarity=0.204 Sum_probs=30.1
Q ss_pred CCCHHHHHHHHHHHhCCCH-HHHHHHHHHHHhHHHh-----cCHHHHHHHHHHHHh
Q psy775 945 PYEIDAAAEVIHRALTMPE-DERTLRMNYLRKREKV-----HDVNYWMRSFLKGMG 994 (1460)
Q Consensus 945 P~d~~~iA~ai~~aL~m~~-~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 994 (1460)
..+.+++++++++++..++ ++-+.+.+.+++.+.+ -++..=+.+|++.+.
T Consensus 394 ~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~ 449 (451)
T PLN02410 394 DLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMR 449 (451)
T ss_pred cccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 4588999999999997653 2333344444444432 345555566666554
No 425
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=48.61 E-value=9.6 Score=41.34 Aligned_cols=12 Identities=42% Similarity=0.800 Sum_probs=11.2
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 6 ~viFD~DGTLid 17 (201)
T TIGR01491 6 LIIFDLDGTLTD 17 (201)
T ss_pred EEEEeCCCCCcC
Confidence 699999999997
No 426
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=48.08 E-value=17 Score=41.80 Aligned_cols=13 Identities=23% Similarity=0.521 Sum_probs=11.1
Q ss_pred EEEEecCCCcCCC
Q psy775 40 ALLLDYDGTLAPI 52 (1460)
Q Consensus 40 ~lFfDiDGTL~~~ 52 (1460)
+++|||||||++-
T Consensus 2 LvvfDFD~TIvd~ 14 (234)
T PF06888_consen 2 LVVFDFDHTIVDQ 14 (234)
T ss_pred EEEEeCCCCccCC
Confidence 6889999999884
No 427
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=47.85 E-value=38 Score=39.99 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=34.9
Q ss_pred hcCCCcEEEEEecCCCcCCCCCCCCCccC-ChhHHHHHHHHhcCCCceEE-EEeC
Q psy775 33 IGTTNKLALLLDYDGTLAPIAPHPDMAVL-PEETKRTLQKLANLPDVHIS-IISG 85 (1460)
Q Consensus 33 ~~~~~~~~lFfDiDGTL~~~~~~p~~a~i-p~s~~~aL~~L~~~~g~~v~-IvTG 85 (1460)
+.-..+-+++||+|-||+.- -+.+++ .|.+.++|.+|++. |+.++ ..+|
T Consensus 117 ~~~~~phVIVfDlD~TLItd---~~~v~Ir~~~v~~sL~~Lk~~-g~vLvLWSyG 167 (297)
T PF05152_consen 117 LVWEPPHVIVFDLDSTLITD---EGDVRIRDPAVYDSLRELKEQ-GCVLVLWSYG 167 (297)
T ss_pred ccCCCCcEEEEECCCccccc---CCccccCChHHHHHHHHHHHc-CCEEEEecCC
Confidence 34456679999999999853 233444 45689999999999 75444 4556
No 428
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=47.80 E-value=13 Score=42.03 Aligned_cols=50 Identities=24% Similarity=0.297 Sum_probs=0.0
Q ss_pred CCCcEEEEEecCCCCCC-------------------------------------------------CCCCCCC-cCCChh
Q psy775 1392 TTNKLALLLDYDGTLAP-------------------------------------------------IAPHPDM-AVLPEE 1421 (1460)
Q Consensus 1392 ~~~~~~l~lD~DGTLap-------------------------------------------------i~~~P~~-a~~~~~ 1421 (1460)
...+-+++||+||||.. +..--++ ..+.|+
T Consensus 2 ~~~~~L~vFD~D~TLi~~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~~~~~l~~g 81 (212)
T COG0560 2 RRMKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVREEFLRLTPG 81 (212)
T ss_pred CCccceEEEecccchhhHHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHHhcCcCCcc
Q ss_pred HHHHHHHHhcCCCceEEEEcC
Q psy775 1422 TKRTLQKLANLPDVHISIISG 1442 (1460)
Q Consensus 1422 ~~~~L~~La~~~~~~vAvvSG 1442 (1460)
+++.++.+.+. |..|+||||
T Consensus 82 a~elv~~lk~~-G~~v~iiSg 101 (212)
T COG0560 82 AEELVAALKAA-GAKVVIISG 101 (212)
T ss_pred HHHHHHHHHHC-CCEEEEEcC
No 429
>PRK11590 hypothetical protein; Provisional
Probab=47.79 E-value=11 Score=42.11 Aligned_cols=17 Identities=35% Similarity=0.622 Sum_probs=0.0
Q ss_pred cCCCcEEEEEecCCCcC
Q psy775 34 GTTNKLALLLDYDGTLA 50 (1460)
Q Consensus 34 ~~~~~~~lFfDiDGTL~ 50 (1460)
+..++-+++||+||||+
T Consensus 2 ~~~~~k~~iFD~DGTL~ 18 (211)
T PRK11590 2 ATHERRVVFFDLDGTLH 18 (211)
T ss_pred CCccceEEEEecCCCCc
No 430
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=47.72 E-value=76 Score=33.94 Aligned_cols=84 Identities=18% Similarity=0.248 Sum_probs=60.5
Q ss_pred EEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccEEEEcCC
Q psy775 746 GVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC 825 (1460)
Q Consensus 746 ~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pvv~~~g~ 825 (1460)
.++-+...++.+.-+.+..+++++| ++..|.+|.|..-++..+. ..+.+++++.++..+|+ .||++....
T Consensus 28 pl~~i~~~~~~~~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DER 97 (141)
T COG0816 28 PLETIKRKNGKPQDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDER 97 (141)
T ss_pred chhhheeccccHhhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCc
Confidence 3444444555445566777777776 5778899999887777766 67789999999999988 688998888
Q ss_pred CCHHHHHHHHHHcc
Q psy775 826 ISQDELASFYRDAA 839 (1460)
Q Consensus 826 v~~eel~Aly~~AD 839 (1460)
++-.+-...+..+|
T Consensus 98 ltTv~A~~~L~~~~ 111 (141)
T COG0816 98 LSTVEAERMLIEAG 111 (141)
T ss_pred cCHHHHHHHHHHcC
Confidence 87766555555443
No 431
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=47.07 E-value=9.4 Score=42.16 Aligned_cols=13 Identities=38% Similarity=0.629 Sum_probs=11.6
Q ss_pred EEEEecCCCcCCC
Q psy775 40 ALLLDYDGTLAPI 52 (1460)
Q Consensus 40 ~lFfDiDGTL~~~ 52 (1460)
+++||+||||++.
T Consensus 3 ~viFD~DGTL~d~ 15 (224)
T TIGR02254 3 TLLFDLDDTILDF 15 (224)
T ss_pred EEEEcCcCccccc
Confidence 6899999999973
No 432
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=47.07 E-value=8.6 Score=42.03 Aligned_cols=12 Identities=42% Similarity=0.836 Sum_probs=0.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
++|||+||||++
T Consensus 1 ~a~FD~DgTL~~ 12 (202)
T TIGR01490 1 LAFFDFDGTLTA 12 (202)
T ss_pred CeEEccCCCCCC
No 433
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=47.02 E-value=1.7e+02 Score=37.05 Aligned_cols=93 Identities=15% Similarity=0.089 Sum_probs=52.5
Q ss_pred cCCCCHHHHHHHHHhccE--EEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc----cccEEE-CCCCHHHH
Q psy775 423 YGCISQDELASFYRDAAV--ALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM----HEALIC-NPYEIDAA 495 (1460)
Q Consensus 423 ~g~v~~eeL~aLY~aADV--~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L----~~allV-NP~D~~el 495 (1460)
.+.+|+.++ ++...+ ||- .-|.| ..+|+++++.|- =+.+...+--..+..+ +-|+.+ ...+.+++
T Consensus 329 ~~w~PQ~~i---L~h~~v~~fvt---H~G~n-S~~Ea~~~GvP~-l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~v 400 (451)
T PLN02410 329 VKWAPQKEV---LSHPAVGGFWS---HCGWN-STLESIGEGVPM-ICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAV 400 (451)
T ss_pred EccCCHHHH---hCCCccCeeee---cCchh-HHHHHHHcCCCE-EeccccccCHHHHHHHHHHhCeeEEeCCcccHHHH
Confidence 378899887 444444 544 56888 667999984442 1111122222222222 225555 34577999
Q ss_pred HHHHHHHcCCCH-HHHHHHHHHHHHHHhh
Q psy775 496 AEVIHRALTMPE-DERTLRMNYLRKREKH 523 (1460)
Q Consensus 496 A~AI~~aL~m~~-~er~~R~~~l~~~v~~ 523 (1460)
++++++++..+. ++-+.+.+.+++.+++
T Consensus 401 ~~av~~lm~~~~~~~~r~~a~~l~~~~~~ 429 (451)
T PLN02410 401 ERAVKRLMVEEEGEEMRKRAISLKEQLRA 429 (451)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 999999997653 2334444455555443
No 434
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=46.88 E-value=8.2 Score=41.05 Aligned_cols=12 Identities=42% Similarity=0.825 Sum_probs=0.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
++|||+||||+.
T Consensus 1 l~~fD~DgTl~~ 12 (177)
T TIGR01488 1 LAIFDFDGTLTR 12 (177)
T ss_pred CEEecCcccccc
No 435
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=46.32 E-value=7.9 Score=41.20 Aligned_cols=12 Identities=50% Similarity=0.850 Sum_probs=0.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 1 ~vlFDlDgtLv~ 12 (183)
T TIGR01509 1 AILFDLDGVLVD 12 (183)
T ss_pred CeeeccCCceec
No 436
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=45.49 E-value=89 Score=37.58 Aligned_cols=113 Identities=14% Similarity=0.198 Sum_probs=75.4
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEE-EEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCcc
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLL-QIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 818 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLv-qi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~p 818 (1460)
++..|+-=-.-|++-.....|++..+++.++ +.++ -.+-|+ ++ ++|.++|.+...++ ||.. -
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~------v~ii~PlsYp~-gn----~~Yi~~V~~~~~~l---F~~~---~ 207 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGDN------VKIIVPMGYPA-NN----QAYIEEVRQAGLAL---FGAE---N 207 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCCC------eEEEEECCcCC-CC----HHHHHHHHHHHHHh---cCcc---c
Confidence 3444554556789999999999988875433 3322 222332 22 35667777666654 4422 3
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCc-cCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLR-DGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlr-EGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
++.+.+.++.+|+.++++.+|+.++.--| .|+|..++=.-. +.|+++|+-.
T Consensus 208 ~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~------G~~v~l~r~n 259 (322)
T PRK02797 208 FQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQL------GKPVVLSRDN 259 (322)
T ss_pred EEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHC------CCcEEEecCC
Confidence 57778999999999999999999998864 899877654321 4577777643
No 437
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=44.87 E-value=8.8 Score=43.85 Aligned_cols=53 Identities=17% Similarity=0.153 Sum_probs=38.6
Q ss_pred CCcEEEEEecCCCCCC---C-------------------CCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhh
Q psy775 1393 TNKLALLLDYDGTLAP---I-------------------APHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHN 1447 (1460)
Q Consensus 1393 ~~~~~l~lD~DGTLap---i-------------------~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~ 1447 (1460)
.++.+++||+|+|+.. . +.. ..+.+-|++.+.++.+.++ |+.|.+||||+-..
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~-~~~~aip~a~~l~~~~~~~-G~~V~~iT~R~~~~ 144 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVAS-GKAPAIPGALELYNYARSR-GVKVFFITGRPESQ 144 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHC-TGGEEETTHHHHHHHHHHT-TEEEEEEEEEETTC
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhc-ccCcccHHHHHHHHHHHHC-CCeEEEEecCCchh
Confidence 5688999999999743 1 111 1235556688888887776 68999999998763
No 438
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=44.74 E-value=4.8e+02 Score=31.89 Aligned_cols=37 Identities=11% Similarity=0.147 Sum_probs=29.2
Q ss_pred EEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeee
Q psy775 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 860 (1460)
Q Consensus 819 vv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc 860 (1460)
.+.+.++++..++.+|++.||+++-.|- =++ .||.+.
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~l 299 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSF 299 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh---hHH--Hhhhhc
Confidence 3677889999999999999999985542 122 799887
No 439
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=44.03 E-value=23 Score=43.68 Aligned_cols=78 Identities=19% Similarity=0.201 Sum_probs=45.4
Q ss_pred CcEEEEEecCCCcCCCCCC------CCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc----cccceeEccC
Q psy775 37 NKLALLLDYDGTLAPIAPH------PDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG----IEGLTYAGNH 106 (1460)
Q Consensus 37 ~~~~lFfDiDGTL~~~~~~------p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~----~~~~~~ig~h 106 (1460)
...++.+|||||++--..- ...-.-.-.+...-..+-.+ |+.+.-.|.|++.++..--. ..-.+|....
T Consensus 374 n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rN-GYkI~YltsR~~Gqa~sTrsylrnieQngykLpd 452 (580)
T COG5083 374 NKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRN-GYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPD 452 (580)
T ss_pred CCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccC-ceEEEEEecccccchhhhhhHHHhhhhcCccCCC
Confidence 4458889999999852100 00111233445555666777 99999999999877653321 2223344555
Q ss_pred CcccccCCC
Q psy775 107 GLEIIHPDG 115 (1460)
Q Consensus 107 Gaei~~~g~ 115 (1460)
|-.+..++.
T Consensus 453 gpviLspd~ 461 (580)
T COG5083 453 GPVILSPDR 461 (580)
T ss_pred CCEeeccch
Confidence 555555443
No 440
>KOG1618|consensus
Probab=43.70 E-value=28 Score=41.49 Aligned_cols=43 Identities=14% Similarity=0.224 Sum_probs=31.5
Q ss_pred CCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCC---ceEEEEe
Q psy775 36 TNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPD---VHISIIS 84 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g---~~v~IvT 84 (1460)
.+...+.|||||.|.- ...+-++..+|++.|.++.| ++.+..|
T Consensus 33 ~~~fgfafDIDGVL~R------G~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 33 PPTFGFAFDIDGVLFR------GHRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred CCceeEEEecccEEEe------cCCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 5567899999999983 33466789999999998833 3444444
No 441
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=43.12 E-value=44 Score=37.52 Aligned_cols=55 Identities=20% Similarity=0.080 Sum_probs=41.7
Q ss_pred CcEEEEEecCCCCCCCC--CCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHHH
Q psy775 1394 NKLALLLDYDGTLAPIA--PHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVME 1450 (1460)
Q Consensus 1394 ~~~~l~lD~DGTLapi~--~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~~ 1450 (1460)
.+-+|.||.||||.... ..+.....-|.+.+-|+.+++++ -|+|=|-.+..=+..
T Consensus 20 ~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~f--eIvVwTAa~~~ya~~ 76 (195)
T TIGR02245 20 GKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYEDY--DIVIWSATSMKWIEI 76 (195)
T ss_pred CCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhCC--EEEEEecCCHHHHHH
Confidence 45678999999999752 22334677789999999999998 579988876554444
No 442
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=43.10 E-value=11 Score=44.40 Aligned_cols=28 Identities=25% Similarity=0.321 Sum_probs=0.0
Q ss_pred EEEEecCCCcCCCCCCCCC-ccCChhHHHHHHHH
Q psy775 40 ALLLDYDGTLAPIAPHPDM-AVLPEETKRTLQKL 72 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~-a~ip~s~~~aL~~L 72 (1460)
+|+||+||||++ +. ........++++..
T Consensus 42 ~VIFDlDGTLvD-----S~~~~~~~a~~~~l~~~ 70 (286)
T PLN02779 42 ALLFDCDGVLVE-----TERDGHRVAFNDAFKEF 70 (286)
T ss_pred EEEEeCceeEEc-----cccHHHHHHHHHHHHHc
No 443
>PRK09449 dUMP phosphatase; Provisional
Probab=42.40 E-value=12 Score=41.66 Aligned_cols=12 Identities=42% Similarity=0.409 Sum_probs=0.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 5 ~iiFDlDGTLid 16 (224)
T PRK09449 5 WILFDADETLFH 16 (224)
T ss_pred EEEEcCCCchhc
No 444
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=42.28 E-value=13 Score=39.94 Aligned_cols=11 Identities=45% Similarity=1.032 Sum_probs=0.0
Q ss_pred EEEecCCCcCC
Q psy775 41 LLLDYDGTLAP 51 (1460)
Q Consensus 41 lFfDiDGTL~~ 51 (1460)
++||+||||++
T Consensus 1 v~fD~DGTL~~ 11 (192)
T PF12710_consen 1 VIFDFDGTLTD 11 (192)
T ss_dssp EEEESBTTTBS
T ss_pred eEEecCcCeec
No 445
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=41.80 E-value=14 Score=40.43 Aligned_cols=12 Identities=50% Similarity=0.587 Sum_probs=0.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 3 ~viFD~dgTLiD 14 (198)
T TIGR01428 3 ALVFDVYGTLFD 14 (198)
T ss_pred EEEEeCCCcCcc
No 446
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=40.49 E-value=14 Score=41.66 Aligned_cols=12 Identities=50% Similarity=0.852 Sum_probs=0.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 4 avIFD~DGvLvD 15 (221)
T COG0637 4 AVIFDMDGTLVD 15 (221)
T ss_pred EEEEcCCCCcCc
No 447
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=40.29 E-value=50 Score=37.07 Aligned_cols=54 Identities=20% Similarity=0.123 Sum_probs=37.6
Q ss_pred CCcEEEEEecCCCcCCCCC--CCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhh
Q psy775 36 TNKLALLLDYDGTLAPIAP--HPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNV 91 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~--~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l 91 (1460)
..+-.|.+|+||||+++.. .+.....-|.+.+=|+.+.++ +.|+|=|-.+..-+
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~--feIvVwTAa~~~ya 74 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYED--YDIVIWSATSMKWI 74 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhC--CEEEEEecCCHHHH
Confidence 3456889999999997632 122345667888999999987 56777777553333
No 448
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=39.46 E-value=2.1e+02 Score=33.82 Aligned_cols=53 Identities=11% Similarity=0.061 Sum_probs=33.9
Q ss_pred cEEEEcCC-CCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcc
Q psy775 818 PIRYIYGC-ISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAG 878 (1460)
Q Consensus 818 pvv~~~g~-v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~ 878 (1460)
|+++-.+. -...=+.+++..||.+++|. |..|+ +-||.++ +.||-+-+-.+..
T Consensus 224 ~~i~w~~~d~g~NPY~~~La~Adyii~Ta--DSinM-~sEAasT-----gkPv~~~~~~~~~ 277 (329)
T COG3660 224 PGIVWNNEDTGYNPYIDMLAAADYIISTA--DSINM-CSEAAST-----GKPVFILEPPNFN 277 (329)
T ss_pred ceeEeCCCCCCCCchHHHHhhcceEEEec--chhhh-hHHHhcc-----CCCeEEEecCCcc
Confidence 55555432 23335788889999998875 77776 4587666 4566666666553
No 449
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=38.88 E-value=7.6e+02 Score=30.37 Aligned_cols=42 Identities=21% Similarity=0.362 Sum_probs=30.6
Q ss_pred HHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcc
Q psy775 828 QDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAG 878 (1460)
Q Consensus 828 ~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~ 878 (1460)
.+++.++|++||+++.=| | .++..|..++ +-|.|+=.+...+
T Consensus 243 ~~dm~~~~~~ADLvIsRa---G-a~Ti~E~~a~-----g~P~IliP~p~~~ 284 (357)
T COG0707 243 IDDMAALLAAADLVISRA---G-ALTIAELLAL-----GVPAILVPYPPGA 284 (357)
T ss_pred HhhHHHHHHhccEEEeCC---c-ccHHHHHHHh-----CCCEEEeCCCCCc
Confidence 346999999999987533 3 5788899998 4566666666553
No 450
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.59 E-value=74 Score=39.00 Aligned_cols=91 Identities=13% Similarity=0.189 Sum_probs=64.2
Q ss_pred HHHHHHHHhccEEEEccCC---CC---CCcceeeeeeeccCCCCCeEEEcCCCCchhcccc--cEEECCCCHHHHHHHHH
Q psy775 429 DELASFYRDAAVALVTPLR---DG---MNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE--ALICNPYEIDAAAEVIH 500 (1460)
Q Consensus 429 eeL~aLY~aADV~VvpSlr---EG---fnLValEamAcq~~~~~GvlVlSe~aGaa~~L~~--allVNP~D~~elA~AI~ 500 (1460)
......++.-|+.+-=+.. +| ++.-..|+++| +|+++.+--.|+-..+.. .+++ -.|..++.+.+.
T Consensus 249 ~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc-----~~~liT~~~~~~e~~f~pgk~~iv-~~d~kdl~~~~~ 322 (373)
T COG4641 249 DGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGC-----GGFLITDYWKDLEKFFKPGKDIIV-YQDSKDLKEKLK 322 (373)
T ss_pred chhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhc-----CCccccccHHHHHHhcCCchheEE-ecCHHHHHHHHH
Confidence 5555556666665533321 22 47789999999 676676666655555543 4444 468999999999
Q ss_pred HHcCCCHHHHHHHHHHHHHHHhhcC
Q psy775 501 RALTMPEDERTLRMNYLRKREKHMN 525 (1460)
Q Consensus 501 ~aL~m~~~er~~R~~~l~~~v~~~~ 525 (1460)
..+..+.++++....+.++.+..|+
T Consensus 323 yll~h~~erkeiae~~ye~V~~~ht 347 (373)
T COG4641 323 YLLNHPDERKEIAECAYERVLARHT 347 (373)
T ss_pred HHhcCcchHHHHHHhhHHHHHHhcc
Confidence 9999988888888888888888777
No 451
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=38.43 E-value=23 Score=37.26 Aligned_cols=51 Identities=25% Similarity=0.277 Sum_probs=42.6
Q ss_pred EEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhccccc
Q psy775 42 LLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGL 100 (1460)
Q Consensus 42 FfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~~~~ 100 (1460)
..++++|++. ...+-+++.+.|+.|.+. +.++|+||-....+.+...+.++
T Consensus 18 ~~~v~~tiat------gGklf~ev~e~iqeL~d~--V~i~IASgDr~gsl~~lae~~gi 68 (152)
T COG4087 18 AGKVLYTIAT------GGKLFSEVSETIQELHDM--VDIYIASGDRKGSLVQLAEFVGI 68 (152)
T ss_pred cceEEEEEcc------CcEEcHhhHHHHHHHHHh--heEEEecCCcchHHHHHHHHcCC
Confidence 4789999984 567889999999999998 89999999888888777765443
No 452
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=38.06 E-value=30 Score=38.42 Aligned_cols=47 Identities=23% Similarity=0.269 Sum_probs=37.7
Q ss_pred cEEEEEecCCCCCC----CCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcC
Q psy775 1395 KLALLLDYDGTLAP----IAPHPDMAVLPEETKRTLQKLANLPDVHISIISG 1442 (1460)
Q Consensus 1395 ~~~l~lD~DGTLap----i~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSG 1442 (1460)
.-++|+|=||||.- -+..+++=...+++..+|..|-+ .+..++|||=
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHh-CCCeEEEEEC
Confidence 45899999999974 45566777788899999999975 4678999984
No 453
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=38.04 E-value=17 Score=40.30 Aligned_cols=15 Identities=47% Similarity=0.676 Sum_probs=12.8
Q ss_pred EEEEEecCCCcCCCC
Q psy775 39 LALLLDYDGTLAPIA 53 (1460)
Q Consensus 39 ~~lFfDiDGTL~~~~ 53 (1460)
-+++||+||||+++.
T Consensus 5 k~i~FD~d~TL~d~~ 19 (229)
T COG1011 5 KAILFDLDGTLLDFD 19 (229)
T ss_pred eEEEEecCCcccccc
Confidence 379999999999863
No 454
>PLN02940 riboflavin kinase
Probab=38.03 E-value=20 Score=44.08 Aligned_cols=32 Identities=22% Similarity=0.198 Sum_probs=0.0
Q ss_pred EEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceE
Q psy775 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHI 80 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v 80 (1460)
+++||+||||++ -.+...++++.+.+..|..+
T Consensus 13 ~VIFDlDGTLvD---------t~~~~~~a~~~~~~~~G~~~ 44 (382)
T PLN02940 13 HVILDLDGTLLN---------TDGIVSDVLKAFLVKYGKQW 44 (382)
T ss_pred EEEECCcCcCCc---------CHHHHHHHHHHHHHHcCCCC
No 455
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=37.61 E-value=35 Score=40.11 Aligned_cols=48 Identities=19% Similarity=0.226 Sum_probs=37.9
Q ss_pred EEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEc---CCChhhHHHh
Q psy775 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIIS---GRNVHNVMEM 1451 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvS---GR~~~~l~~~ 1451 (1460)
++++|.||||- ....+-|++.++|++|.++ +.++.+|| .|+.+.+.++
T Consensus 10 ~~l~DlDGvl~------~G~~~ipga~e~l~~L~~~-g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 10 GFLFDLDGVLY------RGNEAIPGAAEALKRLKAA-GKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred EEEEcCcCceE------eCCccCchHHHHHHHHHHc-CCeEEEEeCCCCCCHHHHHHH
Confidence 68899999997 4567778999999999887 46999997 5666644444
No 456
>PTZ00445 p36-lilke protein; Provisional
Probab=36.55 E-value=41 Score=38.30 Aligned_cols=90 Identities=20% Similarity=0.314 Sum_probs=53.3
Q ss_pred cccccccccchhhhhcCchhhhhhcccCCCcCCCCCCCCCCCCCCCChhhHHHHHHHhhcCCCcEEEEEecCCCCCCCC-
Q psy775 1332 PTTMQPVTLEDFDEYLSKNELLILKGMGTLITEDGDDVLPTTMQPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIA- 1410 (1460)
Q Consensus 1332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLapi~- 1410 (1460)
||.+|--|++=+-+|.+++.-- |.. ....-..+.+.|.. ..=-++++|||=||.++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-------~~~-----------~~~~~~~~v~~L~~----~GIk~Va~D~DnTlI~~Hs 59 (219)
T PTZ00445 2 PTSAQKKFHDAFKEYIESGLFD-------HLN-----------PHESADKFVDLLNE----CGIKVIASDFDLTMITKHS 59 (219)
T ss_pred cchHHHHHHHHHHHHHHhcccc-------cCC-----------HHHHHHHHHHHHHH----cCCeEEEecchhhhhhhhc
Confidence 6777777777777776553211 100 11112223444443 233378999999998821
Q ss_pred ---CCCC------CcCCChhHHHHHHHHhcCCCceEEEEcCCC
Q psy775 1411 ---PHPD------MAVLPEETKRTLQKLANLPDVHISIISGRN 1444 (1460)
Q Consensus 1411 ---~~P~------~a~~~~~~~~~L~~La~~~~~~vAvvSGR~ 1444 (1460)
.+|+ ...++|+....+.+|.+. +++|+|||=-+
T Consensus 60 gG~~~~~~~~~~~~~~~tpefk~~~~~l~~~-~I~v~VVTfSd 101 (219)
T PTZ00445 60 GGYIDPDNDDIRVLTSVTPDFKILGKRLKNS-NIKISVVTFSD 101 (219)
T ss_pred ccccCCCcchhhhhccCCHHHHHHHHHHHHC-CCeEEEEEccc
Confidence 2332 123678888888888764 68999998544
No 457
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=36.35 E-value=20 Score=38.75 Aligned_cols=12 Identities=42% Similarity=0.697 Sum_probs=10.8
Q ss_pred EEEEecCCCCCC
Q psy775 1397 ALLLDYDGTLAP 1408 (1460)
Q Consensus 1397 ~l~lD~DGTLap 1408 (1460)
+++||+||||.+
T Consensus 2 ~viFDlDGTL~d 13 (184)
T TIGR01993 2 VWFFDLDNTLYP 13 (184)
T ss_pred eEEEeCCCCCCC
Confidence 588999999996
No 458
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=35.72 E-value=24 Score=39.75 Aligned_cols=21 Identities=29% Similarity=0.376 Sum_probs=0.0
Q ss_pred cCCCcEEEEEecCCCcCCCCC
Q psy775 34 GTTNKLALLLDYDGTLAPIAP 54 (1460)
Q Consensus 34 ~~~~~~~lFfDiDGTL~~~~~ 54 (1460)
+...+-+.+||+||||+.-.+
T Consensus 1 ~~~~~~la~FDfDgTLt~~ds 21 (210)
T TIGR01545 1 AAGAKRIIFFDLDGTLHQQDM 21 (210)
T ss_pred CCCcCcEEEEcCCCCCccCcc
No 459
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=35.63 E-value=19 Score=38.71 Aligned_cols=12 Identities=42% Similarity=0.791 Sum_probs=11.0
Q ss_pred EEEEecCCCCCC
Q psy775 1397 ALLLDYDGTLAP 1408 (1460)
Q Consensus 1397 ~l~lD~DGTLap 1408 (1460)
+++||+||||..
T Consensus 7 ~viFD~DGTLiD 18 (188)
T PRK10725 7 GLIFDMDGTILD 18 (188)
T ss_pred EEEEcCCCcCcc
Confidence 689999999997
No 460
>PLN02448 UDP-glycosyltransferase family protein
Probab=34.95 E-value=81 Score=39.75 Aligned_cols=114 Identities=15% Similarity=0.099 Sum_probs=61.2
Q ss_pred EcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc----cccEEECC-------C
Q psy775 422 IYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM----HEALICNP-------Y 490 (1460)
Q Consensus 422 ~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L----~~allVNP-------~ 490 (1460)
+.+.+|+.++ ++.+++..+=+ .-|+| ..+|+++++.|- =+.++..+--..+..+ +-|+.+.. .
T Consensus 327 v~~w~pQ~~i---L~h~~v~~fvt-HgG~n-S~~eal~~GvP~-l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~ 400 (459)
T PLN02448 327 VVPWCDQLKV---LCHSSVGGFWT-HCGWN-STLEAVFAGVPM-LTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLV 400 (459)
T ss_pred EeccCCHHHH---hccCccceEEe-cCchh-HHHHHHHcCCCE-EeccccccchhhHHHHHHHhCceEEEecccccCCcC
Confidence 3478888887 45566632222 56787 667999985443 1111222222222222 22555532 3
Q ss_pred CHHHHHHHHHHHcCCC-H--HHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHH
Q psy775 491 EIDAAAEVIHRALTMP-E--DERTLRMNYLRKREKHMNCPGQSSLGGNTSAYAQVNQEFADK 549 (1460)
Q Consensus 491 D~~elA~AI~~aL~m~-~--~er~~R~~~l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~ 549 (1460)
+.++++++++++|+.+ + ++.+.+.+.+++..+.-- ..|| ++|...+. |.+.
T Consensus 401 ~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~-----~~gG--ss~~~l~~-~v~~ 454 (459)
T PLN02448 401 GREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAI-----AKGG--SSDTNLDA-FIRD 454 (459)
T ss_pred cHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHh-----cCCC--cHHHHHHH-HHHH
Confidence 6799999999999864 2 233344444444444332 2333 45655555 4444
No 461
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=34.65 E-value=20 Score=39.64 Aligned_cols=12 Identities=42% Similarity=0.996 Sum_probs=0.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
+++||+||||++
T Consensus 4 ~viFDldGtL~d 15 (211)
T TIGR02247 4 AVIFDFGGVLLP 15 (211)
T ss_pred EEEEecCCceec
No 462
>KOG3742|consensus
Probab=33.94 E-value=61 Score=40.26 Aligned_cols=47 Identities=13% Similarity=0.179 Sum_probs=37.5
Q ss_pred HHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCCCcchhh
Q psy775 830 ELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM 881 (1460)
Q Consensus 830 el~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~aG~~~~L 881 (1460)
++-.+-|.|.+.|+||.+|..|.+|.|..+- +-|-|.+..+|...-|
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVM-----GiPSvtTNlSGFGcfM 539 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVM-----GIPSVTTNLSGFGCFM 539 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEe-----ccccccccccchhhhH
Confidence 4455789999999999999999999998776 3455777788877633
No 463
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=33.63 E-value=95 Score=34.18 Aligned_cols=60 Identities=23% Similarity=0.357 Sum_probs=45.7
Q ss_pred cEEEEEecCCCCCCCCCCCCCcCCChhHHHHHHHHhcCCCceEEEEcCCChhhHH---HhcCCCCccc
Q psy775 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVM---EMVGIEGLTY 1459 (1460)
Q Consensus 1395 ~~~l~lD~DGTLapi~~~P~~a~~~~~~~~~L~~La~~~~~~vAvvSGR~~~~l~---~~~~~~~~~y 1459 (1460)
--.+++|+|-||.|.. +| ..+|++++-+.++... +..+.|+|--+-.-+. +.+|++-++-
T Consensus 28 ikgvi~DlDNTLv~wd-~~---~~tpe~~~W~~e~k~~-gi~v~vvSNn~e~RV~~~~~~l~v~fi~~ 90 (175)
T COG2179 28 IKGVILDLDNTLVPWD-NP---DATPELRAWLAELKEA-GIKVVVVSNNKESRVARAAEKLGVPFIYR 90 (175)
T ss_pred CcEEEEeccCceeccc-CC---CCCHHHHHHHHHHHhc-CCEEEEEeCCCHHHHHhhhhhcCCceeec
Confidence 3479999999999984 34 4678999999999887 4689999987766665 4455666543
No 464
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=33.32 E-value=1.3e+03 Score=30.64 Aligned_cols=65 Identities=15% Similarity=0.175 Sum_probs=43.6
Q ss_pred HHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEc-------------------CCCCchhcccc-c---EEE-
Q psy775 432 ASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVS-------------------PFAGAGEQMHE-A---LIC- 487 (1460)
Q Consensus 432 ~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlS-------------------e~aGaa~~L~~-a---llV- 487 (1460)
..++++||+++.+| |.+.+|++.+++|- |+. .+-|....+.+ . =++
T Consensus 483 ~~~m~aaD~aLaaS-----GTaTLEaAL~g~Pm-----VV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllq 552 (608)
T PRK01021 483 YELMRECDCALAKC-----GTIVLETALNQTPT-----IVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIG 552 (608)
T ss_pred HHHHHhcCeeeecC-----CHHHHHHHHhCCCE-----EEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcC
Confidence 57899999999999 89999999996663 221 33333333322 1 122
Q ss_pred --CCCCHHHHHHHHHHHcCCCH
Q psy775 488 --NPYEIDAAAEVIHRALTMPE 507 (1460)
Q Consensus 488 --NP~D~~elA~AI~~aL~m~~ 507 (1460)
+-.+++.+|+++ +.|.+++
T Consensus 553 gQ~~~tpe~La~~l-~lL~d~~ 573 (608)
T PRK01021 553 GKKDFQPEEVAAAL-DILKTSQ 573 (608)
T ss_pred CcccCCHHHHHHHH-HHhcCHH
Confidence 234679999997 7777655
No 465
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=32.78 E-value=1.1e+02 Score=38.80 Aligned_cols=60 Identities=23% Similarity=0.189 Sum_probs=41.6
Q ss_pred CcEEEEEecCCCcCCCCCC---CCCccCC--------hhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhcc
Q psy775 37 NKLALLLDYDGTLAPIAPH---PDMAVLP--------EETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 97 (1460)
Q Consensus 37 ~~~~lFfDiDGTL~~~~~~---p~~a~ip--------~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~~ 97 (1460)
..-+|.+|.|+||.-=+-. -+.-.+. -.-.+-+..|+++ |+.++|||=-.-.++++.+.-
T Consensus 221 ~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kq-GVlLav~SKN~~~da~evF~k 291 (574)
T COG3882 221 SKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQ-GVLLAVCSKNTEKDAKEVFRK 291 (574)
T ss_pred ccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhc-cEEEEEecCCchhhHHHHHhh
Confidence 3448999999999862111 1111222 3347788999999 999999999887777777643
No 466
>PHA02597 30.2 hypothetical protein; Provisional
Probab=32.31 E-value=21 Score=39.05 Aligned_cols=15 Identities=33% Similarity=0.503 Sum_probs=12.6
Q ss_pred EEEEecCCCCCCCCC
Q psy775 1397 ALLLDYDGTLAPIAP 1411 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~ 1411 (1460)
+++||+||||+.+..
T Consensus 4 ~viFDlDGTLiD~~~ 18 (197)
T PHA02597 4 TILTDVDGVLLSWQS 18 (197)
T ss_pred EEEEecCCceEchhh
Confidence 689999999998554
No 467
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=31.69 E-value=1.8e+02 Score=31.10 Aligned_cols=84 Identities=18% Similarity=0.248 Sum_probs=57.5
Q ss_pred EecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEEEEcCC
Q psy775 346 GVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGC 425 (1460)
Q Consensus 346 ~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv~~~g~ 425 (1460)
.++-+...++...-+++...+++++ ++..+.+|.|-.-++.++. ..+.++..+.++..+|+ .||++....
T Consensus 28 pl~~i~~~~~~~~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DER 97 (141)
T COG0816 28 PLETIKRKNGKPQDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDER 97 (141)
T ss_pred chhhheeccccHhhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCc
Confidence 3344444444444566666777766 4667889999877776665 66778889999998886 588888777
Q ss_pred CCHHHHHHHHHhcc
Q psy775 426 ISQDELASFYRDAA 439 (1460)
Q Consensus 426 v~~eeL~aLY~aAD 439 (1460)
.+-.+-...+..++
T Consensus 98 ltTv~A~~~L~~~~ 111 (141)
T COG0816 98 LSTVEAERMLIEAG 111 (141)
T ss_pred cCHHHHHHHHHHcC
Confidence 77766555555544
No 468
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=31.41 E-value=22 Score=39.87 Aligned_cols=12 Identities=42% Similarity=0.728 Sum_probs=0.0
Q ss_pred EEEEecCCCcCC
Q psy775 40 ALLLDYDGTLAP 51 (1460)
Q Consensus 40 ~lFfDiDGTL~~ 51 (1460)
++|||+||||++
T Consensus 3 la~FDlD~TLi~ 14 (203)
T TIGR02137 3 IACLDLEGVLVP 14 (203)
T ss_pred EEEEeCCcccHH
No 469
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=30.74 E-value=81 Score=36.32 Aligned_cols=91 Identities=21% Similarity=0.272 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCceeeccccccccHHHHHHHHhh--cCcCceEEEEeeCC-----CCCccc-cccCc--
Q psy775 546 FADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADE--QNLKFKLGFFLHIP-----FPPWDI-FRLFP-- 615 (1460)
Q Consensus 546 fAd~~le~l~~~~~~~~s~~~~diIwIhDYhL~LlP~~Lr~~~~~--~~~~~kigfFLHiP-----fP~~e~-fr~lP-- 615 (1460)
|+..+++.++.. +...|+|-.||||-.++|-+++...++ ...+.+..|..|-. ||.... ..-+|
T Consensus 119 fs~a~le~~~~l------~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~ 192 (245)
T PF08323_consen 119 FSRAALELLKKL------GWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDE 192 (245)
T ss_dssp HHHHHHHHHCTC------T-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGG
T ss_pred HHHHHHHHHHhh------CCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHH
Confidence 777777765432 112479999999999999999843110 11257899999963 322111 00112
Q ss_pred ------------cHHHHHhhcccCceeecccHhHHHHHH
Q psy775 616 ------------WSDEILQGMLGCDMVGFHIEDYCLNFV 642 (1460)
Q Consensus 616 ------------~r~eIL~~LL~aDlIGFqt~~yar~FL 642 (1460)
...-+-.++..||.|-.=++.|++--+
T Consensus 193 ~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~ 231 (245)
T PF08323_consen 193 YFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQ 231 (245)
T ss_dssp GS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTT
T ss_pred HhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHh
Confidence 112344678888998888888876533
No 470
>PLN02207 UDP-glycosyltransferase
Probab=29.67 E-value=3.4e+02 Score=34.59 Aligned_cols=114 Identities=13% Similarity=0.088 Sum_probs=62.4
Q ss_pred cCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc----cccEEEC--------C-
Q psy775 423 YGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM----HEALICN--------P- 489 (1460)
Q Consensus 423 ~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L----~~allVN--------P- 489 (1460)
.+..|+.++.+- .+...||- .-|+| ..+|++.++.|- =+.++-++--.-+..+ +-|+.++ .
T Consensus 337 ~~W~PQ~~IL~H-~~vg~FvT---H~Gwn-S~~Eai~~GVP~-l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~ 410 (468)
T PLN02207 337 CGWSPQVEILAH-KAVGGFVS---HCGWN-SIVESLWFGVPI-VTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEI 410 (468)
T ss_pred EEeCCHHHHhcc-cccceeee---cCccc-cHHHHHHcCCCE-EecCccccchhhHHHHHHHhCceEEEecccccccCCc
Confidence 478899887442 22333443 56777 458999985443 1222222222222222 2255442 2
Q ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHH
Q psy775 490 YEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKT 550 (1460)
Q Consensus 490 ~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~ 550 (1460)
-+.++++++|++++....++-+.+.+.+.+..++-- +.|| ++|..+++ |.+.+
T Consensus 411 v~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~-----~~GG--SS~~~l~~-~v~~~ 463 (468)
T PLN02207 411 VNANEIETAIRCVMNKDNNVVRKRVMDISQMIQRAT-----KNGG--SSFAAIEK-FIHDV 463 (468)
T ss_pred ccHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh-----cCCC--cHHHHHHH-HHHHH
Confidence 267899999999986334455556666655555432 3444 56666655 54443
No 471
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=28.11 E-value=63 Score=35.49 Aligned_cols=36 Identities=14% Similarity=0.133 Sum_probs=29.9
Q ss_pred ccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 59 AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 59 a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
..+.+++.+.|+.|+++ |++++|+||.+...+...+
T Consensus 74 ~~~~~g~~~~L~~L~~~-g~~~~i~Sn~~~~~~~~~l 109 (205)
T TIGR01454 74 VEVFPGVPELLAELRAD-GVGTAIATGKSGPRARSLL 109 (205)
T ss_pred cccCCCHHHHHHHHHHC-CCeEEEEeCCchHHHHHHH
Confidence 45788999999999999 9999999998766555444
No 472
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=28.06 E-value=2.9e+02 Score=36.29 Aligned_cols=34 Identities=18% Similarity=0.073 Sum_probs=27.4
Q ss_pred HHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 832 ASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 832 ~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
+.++++||+++++| |.+.+|++.+ +.|.|+.=-.
T Consensus 483 ~~~m~aaD~aLaaS-----GTaTLEaAL~-----g~PmVV~YK~ 516 (608)
T PRK01021 483 YELMRECDCALAKC-----GTIVLETALN-----QTPTIVTCQL 516 (608)
T ss_pred HHHHHhcCeeeecC-----CHHHHHHHHh-----CCCEEEEEec
Confidence 58899999999999 8999999888 4565555433
No 473
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=27.78 E-value=60 Score=35.17 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=30.0
Q ss_pred ccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 59 AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 59 a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
..+.|++.+.|+.|+++ |++++|+||.....+...+
T Consensus 79 ~~~~~g~~e~l~~l~~~-g~~~~IvS~~~~~~~~~~l 114 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEK-GLKTAIVSGGIMCLAKKVA 114 (201)
T ss_pred CCCCccHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHH
Confidence 34678999999999998 9999999998766665554
No 474
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=27.55 E-value=82 Score=40.70 Aligned_cols=58 Identities=17% Similarity=0.303 Sum_probs=45.6
Q ss_pred CCcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCC-ceEEEEeCCchhhhhhhhc
Q psy775 36 TNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPD-VHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 36 ~~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g-~~v~IvTGR~~~~l~~~l~ 96 (1460)
.....+++..||++.....- ...+-|++.++|+.|+++ | ++++|+||.+...+.....
T Consensus 362 ~g~~~~~v~~~~~~~g~i~~--~d~~~~g~~e~l~~L~~~-g~i~v~ivTgd~~~~a~~i~~ 420 (556)
T TIGR01525 362 QGKTVVFVAVDGELLGVIAL--RDQLRPEAKEAIAALKRA-GGIKLVMLTGDNRSAAEAVAA 420 (556)
T ss_pred CCcEEEEEEECCEEEEEEEe--cccchHhHHHHHHHHHHc-CCCeEEEEeCCCHHHHHHHHH
Confidence 34467888999988775432 345789999999999999 9 9999999998777666553
No 475
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=27.43 E-value=65 Score=41.73 Aligned_cols=57 Identities=19% Similarity=0.282 Sum_probs=44.2
Q ss_pred CcEEEEEecCCCcCCCCCCCCCccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 37 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 37 ~~~~lFfDiDGTL~~~~~~p~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
....++++.||+++..-.- ...+.|+++++|++|+++ |++++++||.+...+.....
T Consensus 384 g~~~~~~~~~~~~~g~~~~--~d~l~~~a~e~i~~Lk~~-Gi~v~ilSgd~~~~a~~ia~ 440 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFAL--EDQLRPEAKEVIQALKRR-GIEPVMLTGDNRKTAKAVAK 440 (562)
T ss_pred CCEEEEEEECCEEEEEEEe--cccccHHHHHHHHHHHHc-CCeEEEEcCCCHHHHHHHHH
Confidence 3457889999998764321 234789999999999999 99999999998766665554
No 476
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=26.84 E-value=1.2e+03 Score=29.86 Aligned_cols=108 Identities=19% Similarity=0.225 Sum_probs=56.0
Q ss_pred CCEEEEEEcCccccCCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCCCccE
Q psy775 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819 (1460)
Q Consensus 740 ~kkiIl~VdRLd~~KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~~~pv 819 (1460)
...|.++-|.+..... ..++.+..-|+..+. -.+..+..+.... .....+- ..+.+++.++ |
T Consensus 283 ~svVyvsfGS~~~~~~--~~~~ela~gL~~~~~----~flw~~~~~~~~~-~~~~~lp---~~~~~r~~~~-g------- 344 (477)
T PLN02863 283 HKVVYVCFGSQVVLTK--EQMEALASGLEKSGV----HFIWCVKEPVNEE-SDYSNIP---SGFEDRVAGR-G------- 344 (477)
T ss_pred CceEEEEeeceecCCH--HHHHHHHHHHHhCCC----cEEEEECCCcccc-cchhhCC---HHHHHHhccC-C-------
Confidence 4567788888754433 335666666665543 2333343232111 0011111 1222222222 1
Q ss_pred EEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeeeccCCCCceEEEcCCC
Q psy775 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875 (1460)
Q Consensus 820 v~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc~~~~~~g~lIlSe~a 875 (1460)
+++.+.+++.++.+. ...++|| ..-|+| ..+|++++ +-|+|+=.+.
T Consensus 345 ~~v~~w~PQ~~vL~h-~~v~~fv---tH~G~n-S~~Eal~~-----GvP~l~~P~~ 390 (477)
T PLN02863 345 LVIRGWAPQVAILSH-RAVGAFL---THCGWN-SVLEGLVA-----GVPMLAWPMA 390 (477)
T ss_pred EEecCCCCHHHHhcC-CCcCeEE---ecCCch-HHHHHHHc-----CCCEEeCCcc
Confidence 455678999776542 2344554 367888 56799988 5676766654
No 477
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=26.79 E-value=29 Score=36.99 Aligned_cols=15 Identities=33% Similarity=0.512 Sum_probs=12.5
Q ss_pred EEEEecCCCCCCCCC
Q psy775 1397 ALLLDYDGTLAPIAP 1411 (1460)
Q Consensus 1397 ~l~lD~DGTLapi~~ 1411 (1460)
+++||+||||....+
T Consensus 1 ~viFD~DGTL~D~~~ 15 (175)
T TIGR01493 1 AMVFDVYGTLVDVHG 15 (175)
T ss_pred CeEEecCCcCcccHH
Confidence 478999999998653
No 478
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=26.71 E-value=4.5e+02 Score=33.76 Aligned_cols=92 Identities=11% Similarity=0.150 Sum_probs=55.2
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCC----chhcc---cccEEECC--C
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG----AGEQM---HEALICNP--Y 490 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aG----aa~~L---~~allVNP--~ 490 (1460)
+++.+.+|+.++.+ -..+++||- .-|+| ...||+.++.| .|+--..+ -+..+ +-|+.+++ .
T Consensus 348 v~i~~w~Pq~~lL~-hp~v~~fIt---HGG~~-s~~Eal~~GvP-----~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~ 417 (507)
T PHA03392 348 VLTQKWFPQRAVLK-HKNVKAFVT---QGGVQ-STDEAIDALVP-----MVGLPMMGDQFYNTNKYVELGIGRALDTVTV 417 (507)
T ss_pred eEEecCCCHHHHhc-CCCCCEEEe---cCCcc-cHHHHHHcCCC-----EEECCCCccHHHHHHHHHHcCcEEEeccCCc
Confidence 44568899988632 155777775 56755 67899998544 34333322 11112 22777765 4
Q ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhh
Q psy775 491 EIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523 (1460)
Q Consensus 491 D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~ 523 (1460)
+.+++.+||.++|+.+.- +.+.+++.+.++.
T Consensus 418 t~~~l~~ai~~vl~~~~y--~~~a~~ls~~~~~ 448 (507)
T PHA03392 418 SAAQLVLAIVDVIENPKY--RKNLKELRHLIRH 448 (507)
T ss_pred CHHHHHHHHHHHhCCHHH--HHHHHHHHHHHHh
Confidence 568999999999986432 2334444444443
No 479
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=26.20 E-value=87 Score=37.17 Aligned_cols=72 Identities=21% Similarity=0.208 Sum_probs=47.7
Q ss_pred CCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc---------cccEEECCCCHHH
Q psy775 424 GCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM---------HEALICNPYEIDA 494 (1460)
Q Consensus 424 g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L---------~~allVNP~D~~e 494 (1460)
+..+ +++.++|..||+++..+ |++ +..|+++++ .|+|+.-..|-.++. +-|+.++..+. +
T Consensus 235 ~~~~-~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~g-----~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~ 303 (321)
T TIGR00661 235 RITT-DNFKELIKNAELVITHG---GFS-LISEALSLG-----KPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-R 303 (321)
T ss_pred ECCh-HHHHHHHHhCCEEEECC---ChH-HHHHHHHcC-----CCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-H
Confidence 4444 78999999999999976 665 478999994 444666555543432 22777777666 5
Q ss_pred HHHHHHHHcCCC
Q psy775 495 AAEVIHRALTMP 506 (1460)
Q Consensus 495 lA~AI~~aL~m~ 506 (1460)
+.+++...++++
T Consensus 304 ~~~~~~~~~~~~ 315 (321)
T TIGR00661 304 LLEAILDIRNMK 315 (321)
T ss_pred HHHHHHhccccc
Confidence 555555555543
No 480
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=26.14 E-value=1.1e+02 Score=33.92 Aligned_cols=61 Identities=18% Similarity=0.237 Sum_probs=40.4
Q ss_pred HHhhcCCCcEEEEEecCCCcCCCCC----------------------------CCCCccCChhH-HHHHHHHhcCCCceE
Q psy775 30 SKYIGTTNKLALLLDYDGTLAPIAP----------------------------HPDMAVLPEET-KRTLQKLANLPDVHI 80 (1460)
Q Consensus 30 ~~~~~~~~~~~lFfDiDGTL~~~~~----------------------------~p~~a~ip~s~-~~aL~~L~~~~g~~v 80 (1460)
+..+.-.++.++-||||-|++=-.+ .=++-.+|.+. ++.|..-+++ |-.+
T Consensus 55 ~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~R-GD~i 133 (237)
T COG3700 55 ENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRR-GDAI 133 (237)
T ss_pred HhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhc-CCeE
Confidence 3344445678899999999873111 11233466664 6666666777 9999
Q ss_pred EEEeCCchhhh
Q psy775 81 SIISGRNVHNV 91 (1460)
Q Consensus 81 ~IvTGR~~~~l 91 (1460)
+.+|||+...+
T Consensus 134 ~FvTGRt~gk~ 144 (237)
T COG3700 134 YFVTGRTPGKT 144 (237)
T ss_pred EEEecCCCCcc
Confidence 99999986543
No 481
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=26.08 E-value=5.3e+02 Score=33.66 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=74.0
Q ss_pred CeEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccEE
Q psy775 341 QKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 420 (1460)
Q Consensus 341 ~kvIL~VgRLd~~KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pIv 420 (1460)
..++.+.. .+.|=.++.+.-+-++++.-|+- +|+..+.+ +. .+..+.++.++++-... ..-+
T Consensus 430 avVf~c~~--n~~K~~pev~~~wmqIL~~vP~S----vl~L~~~~---~~---~~~~~~l~~la~~~Gv~-----~eRL- 491 (620)
T COG3914 430 AVVFCCFN--NYFKITPEVFALWMQILSAVPNS----VLLLKAGG---DD---AEINARLRDLAEREGVD-----SERL- 491 (620)
T ss_pred eEEEEecC--CcccCCHHHHHHHHHHHHhCCCc----EEEEecCC---Cc---HHHHHHHHHHHHHcCCC-----hhhe-
Confidence 33444444 46788899999999999999985 35444433 11 24555666665554332 2233
Q ss_pred EEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCC
Q psy775 421 YIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~ 474 (1460)
.|.+..+.++..+-|+.||+++-|--|-| ..++.|++.- |++|++-.
T Consensus 492 ~f~p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm------~vPVlT~~ 538 (620)
T COG3914 492 RFLPPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM------GVPVLTRV 538 (620)
T ss_pred eecCCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh------cCceeeec
Confidence 45688899999999999999998877766 5678888876 55555544
No 482
>KOG2134|consensus
Probab=26.05 E-value=63 Score=39.65 Aligned_cols=46 Identities=26% Similarity=0.429 Sum_probs=32.5
Q ss_pred EEEEecCCCcCCCCC------CC-CCccCChhHHHHHHHHhcCCCceEEEEeCC
Q psy775 40 ALLLDYDGTLAPIAP------HP-DMAVLPEETKRTLQKLANLPDVHISIISGR 86 (1460)
Q Consensus 40 ~lFfDiDGTL~~~~~------~p-~~a~ip~s~~~aL~~L~~~~g~~v~IvTGR 86 (1460)
.+.|||||||++-.+ ++ +-..+.++.-.-|..|.+. |+.++|-|--
T Consensus 77 ~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~-g~~l~iftnq 129 (422)
T KOG2134|consen 77 IIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQD-GIKLFIFTNQ 129 (422)
T ss_pred eEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccC-CeEEEEEecc
Confidence 688999999998433 12 1233456667778888877 8888888764
No 483
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=25.90 E-value=37 Score=37.56 Aligned_cols=11 Identities=45% Similarity=0.700 Sum_probs=10.0
Q ss_pred EEEecCCCCCC
Q psy775 1398 LLLDYDGTLAP 1408 (1460)
Q Consensus 1398 l~lD~DGTLap 1408 (1460)
+|+|+||||..
T Consensus 1 i~~DlDGTLl~ 11 (254)
T PF08282_consen 1 IFSDLDGTLLN 11 (254)
T ss_dssp EEEECCTTTCS
T ss_pred cEEEECCceec
Confidence 68999999987
No 484
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=25.44 E-value=39 Score=37.16 Aligned_cols=13 Identities=15% Similarity=0.386 Sum_probs=0.0
Q ss_pred EEEEecCCCcCCC
Q psy775 40 ALLLDYDGTLAPI 52 (1460)
Q Consensus 40 ~lFfDiDGTL~~~ 52 (1460)
++.||+||||++.
T Consensus 2 ~viFDldgvL~d~ 14 (199)
T PRK09456 2 LYIFDLGNVIVDI 14 (199)
T ss_pred EEEEeCCCccccC
No 485
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=25.37 E-value=8.5e+02 Score=29.63 Aligned_cols=95 Identities=14% Similarity=0.172 Sum_probs=49.1
Q ss_pred CCCEEEEEEcCcccc---CCHHHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhccCCCCC
Q psy775 739 TKQKIVLGVDRLDYT---KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815 (1460)
Q Consensus 739 ~~kkiIl~VdRLd~~---KGi~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~el~~lv~~IN~~~~~~~ 815 (1460)
.++.+++..=|.... ......+.+++.+.+. ++ +.+|...-++ ....+.+.+...++ ..
T Consensus 179 ~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~----~~vi~~~hn~-------p~~~~~i~~~l~~~-~~----- 240 (346)
T PF02350_consen 179 PKPYILVTLHPVTNEDNPERLEQILEALKALAER-QN----VPVIFPLHNN-------PRGSDIIIEKLKKY-DN----- 240 (346)
T ss_dssp TSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TT----EEEEEE--S--------HHHHHHHHHHHTT--TT-----
T ss_pred CCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CC----CcEEEEecCC-------chHHHHHHHHhccc-CC-----
Confidence 445555555444433 3456777777777776 44 2333223211 12333443333332 11
Q ss_pred CccEEEEcCCCCHHHHHHHHHHccEEEECCCccCCCccceeeeee
Q psy775 816 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 860 (1460)
Q Consensus 816 ~~pvv~~~g~v~~eel~Aly~~ADv~vvtSlrEGmnLva~EymAc 860 (1460)
+.+..++++.++.++++.|+++|-.|- | +..|+.++
T Consensus 241 ----v~~~~~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~l 276 (346)
T PF02350_consen 241 ----VRLIEPLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSL 276 (346)
T ss_dssp ----EEEE----HHHHHHHHHHESEEEESSH--H---HHHHGGGG
T ss_pred ----EEEECCCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHh
Confidence 455678999999999999999988873 2 23388877
No 486
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=25.29 E-value=6.5e+02 Score=32.15 Aligned_cols=113 Identities=15% Similarity=0.106 Sum_probs=60.9
Q ss_pred EEcCCCCHHHHHHHHHh--ccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhcc----cccEEEC-----C
Q psy775 421 YIYGCISQDELASFYRD--AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQM----HEALICN-----P 489 (1460)
Q Consensus 421 ~~~g~v~~eeL~aLY~a--ADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L----~~allVN-----P 489 (1460)
++.+.+|+.++ ++. .++||- .-|+| ..+|+++++.|- =+.+..++---.+..+ +-|+.++ .
T Consensus 346 ~v~~w~PQ~~v---L~h~~v~~fvt---H~G~n-S~~Eal~~GvP~-l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~ 417 (477)
T PLN02863 346 VIRGWAPQVAI---LSHRAVGAFLT---HCGWN-SVLEGLVAGVPM-LAWPMAADQFVNASLLVDELKVAVRVCEGADTV 417 (477)
T ss_pred EecCCCCHHHH---hcCCCcCeEEe---cCCch-HHHHHHHcCCCE-EeCCccccchhhHHHHHHhhceeEEeccCCCCC
Confidence 34578898876 444 344443 56888 667999985443 1111122222222222 2255552 2
Q ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCCcchhhhhhhHHHHHHH
Q psy775 490 YEIDAAAEVIHRALTMPEDERTLRMNYLRKREKHMNCPGQSSLGGNTSAYAQVNQEFADKT 550 (1460)
Q Consensus 490 ~D~~elA~AI~~aL~m~~~er~~R~~~l~~~v~~~~~~~~~sl~~~~~~Y~~VNq~fAd~~ 550 (1460)
.+.+++++++.+++. ...+-+.+.+.+++.+++-- ..|| ++|..+++ |.+.+
T Consensus 418 ~~~~~v~~~v~~~m~-~~~~~r~~a~~l~e~a~~Av-----~~gG--SS~~~l~~-~v~~i 469 (477)
T PLN02863 418 PDSDELARVFMESVS-ENQVERERAKELRRAALDAI-----KERG--SSVKDLDG-FVKHV 469 (477)
T ss_pred cCHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHh-----ccCC--cHHHHHHH-HHHHH
Confidence 367899999999874 23444445555555544332 2333 45655655 55544
No 487
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=24.95 E-value=36 Score=38.66 Aligned_cols=25 Identities=32% Similarity=0.438 Sum_probs=16.2
Q ss_pred ChhHHHHHHHHhcCCCceEEEEcCCCh
Q psy775 1419 PEETKRTLQKLANLPDVHISIISGRNV 1445 (1460)
Q Consensus 1419 ~~~~~~~L~~La~~~~~~vAvvSGR~~ 1445 (1460)
.|++.++|++|.+. .+++|+|.-+.
T Consensus 115 ~~gv~~~L~~L~~~--~~l~i~Tn~~~ 139 (238)
T PRK10748 115 PQATHDTLKQLAKK--WPLVAITNGNA 139 (238)
T ss_pred CccHHHHHHHHHcC--CCEEEEECCCc
Confidence 35667777777664 36777777443
No 488
>PLN02207 UDP-glycosyltransferase
Probab=24.71 E-value=8e+02 Score=31.36 Aligned_cols=50 Identities=6% Similarity=0.030 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHhHHHh-----cCHHHHHHHHHHHHhhh
Q psy775 947 EIDAAAEVIHRALTMPEDERTLRMNYLRKREKV-----HDVNYWMRSFLKGMGTL 996 (1460)
Q Consensus 947 d~~~iA~ai~~aL~m~~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~~~ 996 (1460)
+.++++++|++++....++.+.|.+.+.+.+++ -++..-..+|++.+...
T Consensus 412 ~~e~i~~av~~vm~~~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~~~~ 466 (468)
T PLN02207 412 NANEIETAIRCVMNKDNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDVIGI 466 (468)
T ss_pred cHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 789999999999963233444444444444332 25666777777776543
No 489
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=24.32 E-value=1.7e+02 Score=29.57 Aligned_cols=39 Identities=21% Similarity=0.413 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHH
Q psy775 357 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEE 399 (1460)
Q Consensus 357 ~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~e 399 (1460)
.+|...++++++.+|+.+ +|.||..+..|.+.|.++.++
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~~ia~~ 87 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYAEIARR 87 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHHHHHHH
Confidence 689999999999999975 677788887887777665543
No 490
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=23.86 E-value=1.5e+03 Score=28.33 Aligned_cols=141 Identities=13% Similarity=0.178 Sum_probs=85.3
Q ss_pred CeEEEEecCcccc-CCHHHHHHHHHHHHHhCCCCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCCCCcccE
Q psy775 341 QKIVLGVDRLDYT-KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419 (1460)
Q Consensus 341 ~kvIL~VgRLd~~-KGI~~lL~Af~~lL~~~P~~~~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~~~~~pI 419 (1460)
+-+++..-|-+.. +++...++|+.++++++|+.. ++ .-...+ +..++.. +..++.. ..+
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi-yp~H~~---~~v~e~~----------~~~L~~~--~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI-YPVHPR---PRVRELV----------LKRLKNV--ERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE-EeCCCC---hhhhHHH----------HHHhCCC--CcE
Confidence 3455667776665 999999999999999998752 22 221111 2222221 1111111 123
Q ss_pred EEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCCCCCeEEEcCCCCchhccc-c-cEEECCCCHHHHHH
Q psy775 420 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMH-E-ALICNPYEIDAAAE 497 (1460)
Q Consensus 420 v~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~~~GvlVlSe~aGaa~~L~-~-allVNP~D~~elA~ 497 (1460)
.+..++...++..|++.|-+.+--| |=.--||-.-+.| ++++=+.+.=.+.+. + .++|++ |.+.+.+
T Consensus 265 -~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~P----vl~lR~~TERPE~v~agt~~lvg~-~~~~i~~ 333 (383)
T COG0381 265 -KLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGKP----VLVLRDTTERPEGVEAGTNILVGT-DEENILD 333 (383)
T ss_pred -EEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCCc----EEeeccCCCCccceecCceEEeCc-cHHHHHH
Confidence 4448899999999999997766555 2334455544222 234434333333342 2 566765 8899999
Q ss_pred HHHHHcCCCHHHHHH
Q psy775 498 VIHRALTMPEDERTL 512 (1460)
Q Consensus 498 AI~~aL~m~~~er~~ 512 (1460)
++.++++++...+++
T Consensus 334 ~~~~ll~~~~~~~~m 348 (383)
T COG0381 334 AATELLEDEEFYERM 348 (383)
T ss_pred HHHHHhhChHHHHHH
Confidence 999999987666443
No 491
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=23.69 E-value=80 Score=35.50 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=31.3
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhhc
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l~ 96 (1460)
.+-|++.++|..|+++ |++++|+|+++...+...+.
T Consensus 89 ~~~~gv~e~L~~L~~~-g~~l~i~T~k~~~~~~~~l~ 124 (220)
T COG0546 89 RLFPGVKELLAALKSA-GYKLGIVTNKPERELDILLK 124 (220)
T ss_pred ccCCCHHHHHHHHHhC-CCeEEEEeCCcHHHHHHHHH
Confidence 4678999999999999 99999999998777776664
No 492
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=23.49 E-value=76 Score=32.85 Aligned_cols=35 Identities=11% Similarity=0.195 Sum_probs=29.6
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+-+++.+.|++|+++ |++++++|+.+...+...+
T Consensus 77 ~~~~~~~~~L~~l~~~-~~~~~i~Sn~~~~~~~~~l 111 (176)
T PF13419_consen 77 QPYPGVRELLERLKAK-GIPLVIVSNGSRERIERVL 111 (176)
T ss_dssp EESTTHHHHHHHHHHT-TSEEEEEESSEHHHHHHHH
T ss_pred chhhhhhhhhhhcccc-cceeEEeecCCcccccccc
Confidence 4668999999999988 9999999999877665554
No 493
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=23.03 E-value=93 Score=34.68 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=29.4
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+.|++.++|+.|+++ |++++|+||.+...+...+
T Consensus 92 ~~~~g~~~~l~~l~~~-g~~~~i~S~~~~~~~~~~l 126 (222)
T PRK10826 92 PLLPGVREALALCKAQ-GLKIGLASASPLHMLEAVL 126 (222)
T ss_pred CCCCCHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHH
Confidence 4678999999999999 9999999998766655544
No 494
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=23.03 E-value=44 Score=37.13 Aligned_cols=12 Identities=50% Similarity=0.822 Sum_probs=11.0
Q ss_pred EEEEecCCCCCC
Q psy775 1397 ALLLDYDGTLAP 1408 (1460)
Q Consensus 1397 ~l~lD~DGTLap 1408 (1460)
+++||+||||..
T Consensus 6 ~viFD~DGTL~d 17 (221)
T PRK10563 6 AVFFDCDGTLVD 17 (221)
T ss_pred EEEECCCCCCCC
Confidence 689999999998
No 495
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=22.90 E-value=1.1e+03 Score=31.86 Aligned_cols=132 Identities=13% Similarity=0.130 Sum_probs=73.0
Q ss_pred cCCeEEEEecCccccCCHHH-HH---HHHHHHHHhCCCCC-CcEEEEEEEcCCCCChHHHHHHHHHHHHHHHHHhcccCC
Q psy775 339 TKQKIVLGVDRLDYTKGLVH-RL---KAFETLLEKHPEHL-EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT 413 (1460)
Q Consensus 339 ~~~kvIL~VgRLd~~KGI~~-lL---~Af~~lL~~~P~~~-~kvvLvqig~psr~~~~ey~~L~~ev~~lv~~IN~~fg~ 413 (1460)
++.-+++.+-|+..-|=-.. .| .-+.+++ +.|+.. ..++++..|-...++.. -+++.+.+.+++..||..-.-
T Consensus 442 p~slfdv~~rR~heYKRq~LniL~ii~~y~rik-~~p~~~~~Pv~~IFaGKAhP~d~~-gK~iIk~I~~va~~in~Dp~v 519 (713)
T PF00343_consen 442 PDSLFDVQARRFHEYKRQLLNILHIIDRYNRIK-NNPNKKIRPVQFIFAGKAHPGDYM-GKEIIKLINNVAEVINNDPEV 519 (713)
T ss_dssp TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHH-HSTTSCCS-EEEEEE----TT-HH-HHHHHHHHHHHHHHHCT-TTT
T ss_pred cchhhhhhhhhcccccccCcccccHHHHHHHHH-hcccCCCCCeEEEEeccCCCCcHH-HHHHHHHHHHHHHHHhcChhh
Confidence 45567789999999996555 33 3444543 455432 24666666655444432 246667777777778764212
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhccEEEEccCCCCCCcceeeeeeeccCC----CCCeEEEcCCCCchhcc
Q psy775 414 PNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINE----PPGVLIVSPFAGAGEQM 481 (1460)
Q Consensus 414 ~~~~pIv~~~g~v~~eeL~aLY~aADV~VvpSlrEGfnLValEamAcq~~~----~~GvlVlSe~aGaa~~L 481 (1460)
.+.-.|+|+ .+.+-.--..++.+|||-+-+|+ .++|| |++.. -.|++.+|..-|+.-++
T Consensus 520 ~~~lkVvFl-enYdvslA~~lipg~DVwln~p~------~p~EA--SGTSgMK~~~NGaL~lstlDG~niEi 582 (713)
T PF00343_consen 520 GDRLKVVFL-ENYDVSLAEKLIPGVDVWLNIPT------RPKEA--SGTSGMKAAMNGALNLSTLDGWNIEI 582 (713)
T ss_dssp CCGEEEEEE-TT-SHHHHHHHGGG-SEEEE---------TTSSS--S-SHHHHHHHTT-EEEEESSTCHHHH
T ss_pred ccceeEEee-cCCcHHHHHHHhhhhhhhhhCCC------CCccc--cCCCcchhhcCCCeEEecccchhHHH
Confidence 222356766 55555555568999999999997 45665 44331 14778888888886665
No 496
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=22.82 E-value=1.8e+02 Score=29.33 Aligned_cols=38 Identities=21% Similarity=0.440 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCEEEEEEEcCCCCChhHHHHHHH
Q psy775 757 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKE 798 (1460)
Q Consensus 757 ~~kL~Afe~fL~~~P~~~~kVvLvqi~~psr~~~~~y~~l~~ 798 (1460)
..|...++++++.+|+. .+|.||..+..|.+.|.++.+
T Consensus 49 ~~K~~~i~~i~~~fP~~----kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 49 EHKRDNIERILRDFPER----KFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred hHHHHHHHHHHHHCCCC----cEEEEeeCCCcCHHHHHHHHH
Confidence 69999999999999986 477789888888877765443
No 497
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=22.66 E-value=87 Score=34.68 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=29.6
Q ss_pred cCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 60 VLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 60 ~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
.+.|++.++|+.|+++ |++++|+||.....+...+
T Consensus 82 ~~~~g~~~~l~~L~~~-g~~~~i~S~~~~~~~~~~l 116 (214)
T PRK13288 82 TEYETVYETLKTLKKQ-GYKLGIVTTKMRDTVEMGL 116 (214)
T ss_pred ccCcCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHH
Confidence 4678999999999999 9999999998866665554
No 498
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=22.58 E-value=91 Score=34.21 Aligned_cols=36 Identities=8% Similarity=0.157 Sum_probs=29.7
Q ss_pred ccCChhHHHHHHHHhcCCCceEEEEeCCchhhhhhhh
Q psy775 59 AVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMV 95 (1460)
Q Consensus 59 a~ip~s~~~aL~~L~~~~g~~v~IvTGR~~~~l~~~l 95 (1460)
..+-|++.++|+.|+++ |++++|+|+.+...+...+
T Consensus 84 ~~~~~g~~~~L~~l~~~-g~~~~i~S~~~~~~~~~~l 119 (213)
T TIGR01449 84 TSVFPGVEATLGALRAK-GLRLGLVTNKPTPLARPLL 119 (213)
T ss_pred CccCCCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHH
Confidence 34678999999999998 9999999998766655544
No 499
>KOG0925|consensus
Probab=22.28 E-value=75 Score=40.03 Aligned_cols=69 Identities=26% Similarity=0.319 Sum_probs=53.4
Q ss_pred cccccccccccchhhhhcCchhhhhhcccCCCcCCCCCCCCC-CCCCCCChhhHHHHHHHhhcCCCcEEEEEecCCCCCC
Q psy775 1330 VLPTTMQPVTLEDFDEYLSKNELLILKGMGTLITEDGDDVLP-TTMQPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAP 1408 (1460)
Q Consensus 1330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~l~~~~~~~~~~~l~lD~DGTLap 1408 (1460)
.+-..|||.+|-..++---++--..+|..|+. |... +-|.|-|.+.+-++|+.+ ..+=+||=||-|++
T Consensus 388 ~~~~em~~~typeilrsNL~s~VL~LKklgI~------dlvhfdfmDpPAPEtLMrALE~L-----nYLaaLdDdGnLT~ 456 (699)
T KOG0925|consen 388 AFEKEMQPQTYPEILRSNLSSTVLQLKKLGID------DLVHFDFMDPPAPETLMRALEVL-----NYLAALDDDGNLTS 456 (699)
T ss_pred hhhhcCCCCCcHHHHHHhhHHHHHHHHhcCcc------cccCCcCCCCCChHHHHHHHHHh-----hhhhhhCCCcccch
Confidence 34567999999998887777777788888876 2333 667888889998888774 45667999999998
Q ss_pred C
Q psy775 1409 I 1409 (1460)
Q Consensus 1409 i 1409 (1460)
+
T Consensus 457 l 457 (699)
T KOG0925|consen 457 L 457 (699)
T ss_pred h
Confidence 5
No 500
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=22.15 E-value=90 Score=35.64 Aligned_cols=12 Identities=42% Similarity=0.744 Sum_probs=10.5
Q ss_pred EEEEecCCCCCC
Q psy775 1397 ALLLDYDGTLAP 1408 (1460)
Q Consensus 1397 ~l~lD~DGTLap 1408 (1460)
++++|+||||..
T Consensus 1 li~~DlDGTLl~ 12 (256)
T TIGR00099 1 LIFIDLDGTLLN 12 (256)
T ss_pred CEEEeCCCCCCC
Confidence 478999999995
Done!