RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy775
(1460 letters)
>gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a
glycosyltransferase that catalyses the synthesis of
alpha,alpha-1,1-trehalose-6-phosphate from
glucose-6-phosphate using a UDP-glucose donor. It is a
key enzyme in the trehalose synthesis pathway. Trehalose
is a nonreducing disaccharide present in a wide variety
of organisms and may serve as a source of energy and
carbon. It is characterized most notably in insect,
plant, and microbial cells. Its production is often
associated with a variety of stress conditions,
including desiccation, dehydration, heat, cold, and
oxidation. This family represents the catalytic domain
of the TPS. Some members of this domain family coexist
with a C-terminal trehalose phosphatase domain.
Length = 460
Score = 535 bits (1382), Expect = e-177
Identities = 197/389 (50%), Positives = 258/389 (66%), Gaps = 24/389 (6%)
Query: 140 KVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKAL 199
V V + P+ F+ YYNG N WPLFH D A F E W AY +VN++FAD + L
Sbjct: 70 TVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVL 129
Query: 200 QILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLF 259
+ P D LVW+HDYHL+L +R E+ ++GFFLHIPFP +IFR
Sbjct: 130 R------PGD----LVWVHDYHLLLLPQMLR----ERGPDARIGFFLHIPFPSSEIFRCL 175
Query: 260 PWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPI 319
PW +E+L+G+LG D++GF E Y NF+ CC R LG V VE+GGR VR+ PI
Sbjct: 176 PWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGG-VEYGGRRVRVGAFPI 234
Query: 320 AIPYERFVQLAQAAP--------RVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHP 371
I + F +LA + R +K+++GVDRLDY+KG+ RL AFE LLE++P
Sbjct: 235 GIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYP 294
Query: 372 EHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDEL 431
E KV L+QIAVPSRTDV EYQ+L+ E+++LVGRING+F T +W+P+RY+Y + ++EL
Sbjct: 295 EWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREEL 354
Query: 432 ASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYE 491
A+ YR A VALVTPLRDGMNLVAKE+VACQ ++ PGVLI+S FAGA E++ AL+ NPY+
Sbjct: 355 AALYRAADVALVTPLRDGMNLVAKEYVACQ-DDDPGVLILSEFAGAAEELSGALLVNPYD 413
Query: 492 IDAAAEVIHRALTMPEDERTLRMNYLRKR 520
ID A+ IHRALTMP +ER R LR+
Sbjct: 414 IDEVADAIHRALTMPLEERRERHRKLREY 442
Score = 459 bits (1183), Expect = e-148
Identities = 184/454 (40%), Positives = 246/454 (54%), Gaps = 109/454 (24%)
Query: 538 AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597
AY +VN++FAD + L+ P D LVW+HDYHL+L +R E+ ++
Sbjct: 113 AYVRVNRKFADAIAEVLR------PGD----LVWVHDYHLLLLPQMLR----ERGPDARI 158
Query: 598 GFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKN 657
GFFLHIPFP +IFR PW +E+L+G+LG D++GF E Y NF+ CC R LG V
Sbjct: 159 GFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDG 218
Query: 658 LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717
VE+GGR VR+ PI I + F +LA + + +R
Sbjct: 219 G-VEYGGRRVRVGAFPIGIDPDAFRKLAASPE------------------VQERAAELRE 259
Query: 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKV 777
+ +K+++GVDRLDY+KG+ RL AFE LLE++PE KV
Sbjct: 260 RLG-------------------GRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKV 300
Query: 778 TLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 837
L+QIAVPSRTDV EYQ+L+ E+++LVGRING+F T +W+P+RY+Y + ++ELA+ YR
Sbjct: 301 VLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRA 360
Query: 838 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897
A VALVTPLRDGMNLVAKE+VACQ ++ PGVLI+S FAGA E++ AL+ NPY+ID A+
Sbjct: 361 ADVALVTPLRDGMNLVAKEYVACQ-DDDPGVLILSEFAGAAEELSGALLVNPYDIDEVAD 419
Query: 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 957
I H A
Sbjct: 420 AI--------------------------------------HRA----------------- 424
Query: 958 ALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLK 991
LTMP +ER R LR+ + HDV W SFL
Sbjct: 425 -LTMPLEERRERHRKLREYVRTHDVQAWANSFLD 457
Score = 173 bits (442), Expect = 2e-46
Identities = 58/133 (43%), Positives = 80/133 (60%), Gaps = 9/133 (6%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 1128
E+ ++GFFLHIPFP +IFR PW +E+L+G+LG D++GF E Y NF+ CC R L
Sbjct: 151 ERGPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLL 210
Query: 1129 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP--------RVIDTKQKIVLG 1180
G V VE+GGR VR+ PI I + F +LA + R +K+++G
Sbjct: 211 GLEVTDDG-GVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVG 269
Query: 1181 VDRLDYTKGLVHR 1193
VDRLDY+KG+ R
Sbjct: 270 VDRLDYSKGIPER 282
>gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase
[UDP-forming]. This enzyme catalyzes the key,
penultimate step in biosynthesis of trehalose, a
compatible solute made as an osmoprotectant in some
species in all three domains of life. The gene symbol
OtsA stands for osmotically regulated trehalose
synthesis A. Trehalose helps protect against both
osmotic and thermal stresses, and is made from two
glucose subunits. This model excludes
glucosylglycerol-phosphate synthase, an enzyme of an
analogous osmoprotectant system in many cyanobacterial
strains. This model does not identify archaeal examples,
as they are more divergent than
glucosylglycerol-phosphate synthase. Sequences that
score in the gray zone between the trusted and noise
cutoffs include a number of yeast multidomain proteins
in which the N-terminal domain may be functionally
equivalent to this family. The gray zone also includes
the OtsA of Cornyebacterium glutamicum (and related
species), shown to be responsible for synthesis of only
trace amounts of trehalose while the majority is
synthesized by the TreYZ pathway; the significance of
OtsA in this species is unclear (see Wolf, et al.,
PMID:12890033) [Cellular processes, Adaptations to
atypical conditions].
Length = 456
Score = 467 bits (1203), Expect = e-151
Identities = 186/404 (46%), Positives = 248/404 (61%), Gaps = 27/404 (6%)
Query: 127 EDKVSDLLKTLQEKV--MSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAY 184
++ L L+ K+ V + + D YYNG N T WPLFH PD + + W AY
Sbjct: 51 DEGEPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLIRYDRKAWEAY 110
Query: 185 AQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGF 244
+VN+ FA+ LQ P D +VW+HDYHLML +R E ++ K+GF
Sbjct: 111 RRVNRLFAEALAPLLQ------PGD----IVWVHDYHLMLLPAMLR----ELGVQNKIGF 156
Query: 245 FLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLL 304
FLHIPFP +I+R PW E+L+G+L D+VGF D NF+ R LG
Sbjct: 157 FLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNG-- 214
Query: 305 VEHGGRTVRIRPLPIAIPYERFVQLAQAA---PRVIDTKQ-----KIVLGVDRLDYTKGL 356
VE GGRTVR+ PI I +RF + A+ R+ + ++ K+++GVDRLDY+KGL
Sbjct: 215 VESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGL 274
Query: 357 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416
RL AFE LE+HPE KV L+QIAVPSR DV EYQ L+ ++++LVGRINGRF T +W
Sbjct: 275 PERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDW 334
Query: 417 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 476
+PIRY+ ++EL + YR A V LVTPLRDGMNLVAKE+VA Q + GVLI+S FAG
Sbjct: 335 TPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQ-DPKDGVLILSEFAG 393
Query: 477 AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
A ++++ AL+ NPY+ID A+ I RALTMP +ER R + +
Sbjct: 394 AAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDK 437
Score = 392 bits (1010), Expect = e-123
Identities = 173/454 (38%), Positives = 229/454 (50%), Gaps = 110/454 (24%)
Query: 538 AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597
AY +VN+ FA+ LQ P D +VW+HDYHLML +R E ++ K+
Sbjct: 109 AYRRVNRLFAEALAPLLQ------PGD----IVWVHDYHLMLLPAMLR----ELGVQNKI 154
Query: 598 GFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKN 657
GFFLHIPFP +I+R PW E+L+G+L D+VGF D NF+ R LG
Sbjct: 155 GFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNG 214
Query: 658 LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717
VE GGRTVR+ PI I +RF + A+ + I +R
Sbjct: 215 --VESGGRTVRVGAFPIGIDVDRFAEQAKK------------------PSVQKRIAELRE 254
Query: 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKV 777
S+ +K+++GVDRLDY+KGL RL AFE LE+HPE KV
Sbjct: 255 SLK-------------------GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKV 295
Query: 778 TLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 837
L+QIAVPSR DV EYQ L+ ++++LVGRINGRF T +W+PIRY+ ++EL + YR
Sbjct: 296 VLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRA 355
Query: 838 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897
A V LVTPLRDGMNLVAKE+VA Q + GVLI+S FAGA ++++ AL+ NPY+ID A+
Sbjct: 356 ADVGLVTPLRDGMNLVAKEYVAAQ-DPKDGVLILSEFAGAAQELNGALLVNPYDIDGMAD 414
Query: 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 957
I AL
Sbjct: 415 AI--------------------------------------ARAL---------------- 420
Query: 958 ALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLK 991
TMP +ER R + + + +DV W FL
Sbjct: 421 --TMPLEEREERHRAMMDKLRKNDVQRWREDFLS 452
Score = 143 bits (364), Expect = 2e-36
Identities = 56/133 (42%), Positives = 78/133 (58%), Gaps = 10/133 (7%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 1128
E ++ K+GFFLHIPFP +I+R PW E+L+G+L D+VGF D NF+ R L
Sbjct: 147 ELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSREL 206
Query: 1129 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA---PRVIDTKQ-----KIVLG 1180
G VE GGRTVR+ PI I +RF + A+ R+ + ++ K+++G
Sbjct: 207 GLETLPNG--VESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIG 264
Query: 1181 VDRLDYTKGLVHR 1193
VDRLDY+KGL R
Sbjct: 265 VDRLDYSKGLPER 277
Score = 57.7 bits (140), Expect = 3e-08
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 1013 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLG 1049
E ++ K+GFFLHIPFP +I+R PW E+L+G+L
Sbjct: 147 ELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLA 183
>gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate
synthase/HAD hydrolase subfamily IIB; Provisional.
Length = 726
Score = 469 bits (1208), Expect = e-148
Identities = 182/407 (44%), Positives = 247/407 (60%), Gaps = 27/407 (6%)
Query: 122 IPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHW 181
E ++ L+ L ++ V + + D YY G CN T WPLFH P+ F W
Sbjct: 56 ESEEQRARIEPRLEELG--LVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRFW 113
Query: 182 RAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFK 241
+Y +VNQ FA+ I A P D +VW+HDY LML +R E+ +
Sbjct: 114 ESYERVNQRFAE------AIAAIARPGD----VVWVHDYQLMLLPAMLR----ERLPDAR 159
Query: 242 LGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRK 301
+GFFLHIPFP +++FRL PW +EIL+G+LG D++GFH DY +F+ R LG +
Sbjct: 160 IGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG 219
Query: 302 NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP---RVIDTKQ-----KIVLGVDRLDYT 353
+ GGR VR+ P+ I Y++F AQ + +Q KI+L +DRLDYT
Sbjct: 220 E--IRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYT 277
Query: 354 KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT 413
KG+ RL AFE LEK+PE KV L+Q+AVPSRT V +YQ++K E+D+LVGRING F T
Sbjct: 278 KGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGT 337
Query: 414 PNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP 473
+W+PI Y Y + +EL + YR A VALVTPLRDGMNLVAKE+VA + + GVLI+S
Sbjct: 338 VDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDG-DGVLILSE 396
Query: 474 FAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
AGA ++ EAL+ NP +I+ A I RAL MPE+E+ RM +++R
Sbjct: 397 MAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQER 443
Score = 402 bits (1036), Expect = e-123
Identities = 176/476 (36%), Positives = 240/476 (50%), Gaps = 112/476 (23%)
Query: 538 AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597
+Y +VNQ FA+ I A P D +VW+HDY LML +R E+ ++
Sbjct: 115 SYERVNQRFAE------AIAAIARPGD----VVWVHDYQLMLLPAMLR----ERLPDARI 160
Query: 598 GFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKN 657
GFFLHIPFP +++FRL PW +EIL+G+LG D++GFH DY +F+ R LG +
Sbjct: 161 GFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGE 220
Query: 658 LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717
+ GGR VR+ P+ I Y++F AQ + E IR
Sbjct: 221 --IRLGGRIVRVDAFPMGIDYDKFHNSAQ---------------------DPEVQEEIR- 256
Query: 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKV 777
+L Q +KI+L +DRLDYTKG+ RL AFE LEK+PE KV
Sbjct: 257 ----------RLRQDLR-----GRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKV 301
Query: 778 TLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 837
L+Q+AVPSRT V +YQ++K E+D+LVGRING F T +W+PI Y Y + +EL + YR
Sbjct: 302 RLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRA 361
Query: 838 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897
A VALVTPLRDGMNLVAKE+VA + + GVLI+S AG AAAE
Sbjct: 362 ADVALVTPLRDGMNLVAKEYVASRTDG-DGVLILSEMAG-----------------AAAE 403
Query: 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 957
+ EAL+ NP +I+ A I R
Sbjct: 404 ---------------------------------------LAEALLVNPNDIEGIAAAIKR 424
Query: 958 ALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDGDDVLPTTLIADE 1013
AL MPE+E+ RM +++R + +DV+ W FL + + + + I
Sbjct: 425 ALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELRE--AAEKNKAFASKPITPA 478
Score = 140 bits (356), Expect = 5e-34
Identities = 54/127 (42%), Positives = 77/127 (60%), Gaps = 10/127 (7%)
Query: 1075 KLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDR 1134
++GFFLHIPFP +++FRL PW +EIL+G+LG D++GFH DY +F+ R LG +
Sbjct: 159 RIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETEL 218
Query: 1135 KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAP---RVIDTKQ-----KIVLGVDRLDY 1186
+ GGR VR+ P+ I Y++F AQ + +Q KI+L +DRLDY
Sbjct: 219 GE--IRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDY 276
Query: 1187 TKGLVHR 1193
TKG+ R
Sbjct: 277 TKGIPRR 283
Score = 80.4 bits (199), Expect = 4e-15
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 37 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96
++ LLLDYDGTL P AP P++AV +E + L++LA P+ ++IISGR+ + G
Sbjct: 491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFG 550
Query: 97 IEGLTYAGNHGLEIIHPDGS-RFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPK 149
+ HG P G + + P+ TE++D V +L+ ++ I+ K
Sbjct: 551 DLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEK 604
Score = 71.1 bits (175), Expect = 3e-12
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 1394 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN 1444
++ LLLDYDGTL P AP P++AV +E + L++LA P+ ++IISGR+
Sbjct: 491 SRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRD 541
>gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate
transport and metabolism].
Length = 486
Score = 435 bits (1122), Expect = e-139
Identities = 177/407 (43%), Positives = 242/407 (59%), Gaps = 30/407 (7%)
Query: 127 EDKVSDLLKTLQEKVMSVHI--DPKIFDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAY 184
D+ SD LK + S + + ++ YYNG N WPLFH D + W AY
Sbjct: 71 TDESSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDVAYERNWWDAY 130
Query: 185 AQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGF 244
+VN++FADK ++ EP D ++W+HDYHL+L +R + K+GF
Sbjct: 131 VKVNRKFADKIVEIY------EPGD----IIWVHDYHLLLVPQMLRERIPDA----KIGF 176
Query: 245 FLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLL 304
FLHIPFP ++FR PW +EIL+G+LG D++GF E Y NF+D C R LG D
Sbjct: 177 FLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRF 236
Query: 305 VEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK-----------QKIVLGVDRLDYT 353
GR V++ PI I E F + K +K+++GVDRLDY+
Sbjct: 237 NGADGRIVKVGAFPIGIDPEEF--ERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYS 294
Query: 354 KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT 413
KG+ RL AFE LLE++PE KV LLQIA PSR DV+EYQ L+ ++++LVGRING F +
Sbjct: 295 KGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGS 354
Query: 414 PNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSP 473
+W+P+ Y++ + ++EL + YR A V LVTPLRDGMNLVAKE+VA Q + PGVLI+S
Sbjct: 355 LSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQ-RDKPGVLILSE 413
Query: 474 FAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
FAGA ++ +ALI NP++ A+ I RALTM +ER R L K+
Sbjct: 414 FAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQ 460
Score = 364 bits (936), Expect = e-112
Identities = 166/454 (36%), Positives = 226/454 (49%), Gaps = 107/454 (23%)
Query: 538 AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597
AY +VN++FADK ++ EP D ++W+HDYHL+L +R + K+
Sbjct: 129 AYVKVNRKFADKIVEIY------EPGD----IIWVHDYHLLLVPQMLRERIPDA----KI 174
Query: 598 GFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKN 657
GFFLHIPFP ++FR PW +EIL+G+LG D++GF E Y NF+D C R LG D
Sbjct: 175 GFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADI 234
Query: 658 LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717
GR V++ PI I E F + K
Sbjct: 235 RFNGADGRIVKVGAFPIGIDPEEF--ERALKSPSVQEKVL-------------------- 272
Query: 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKV 777
+L R +K+++GVDRLDY+KG+ RL AFE LLE++PE KV
Sbjct: 273 ----------ELKAELGR----NKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKV 318
Query: 778 TLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 837
LLQIA PSR DV+EYQ L+ ++++LVGRING F + +W+P+ Y++ + ++EL + YR
Sbjct: 319 VLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRA 378
Query: 838 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAE 897
A V LVTPLRDGMNLVAKE+VA Q + PGVLI+S FAGA ++ +ALI NP++ A
Sbjct: 379 ADVMLVTPLRDGMNLVAKEYVAAQ-RDKPGVLILSEFAGAASELRDALIVNPWDTKEVA- 436
Query: 898 VIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 957
+ + AL
Sbjct: 437 -------------------------------------DAIKRAL---------------- 443
Query: 958 ALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLK 991
TM +ER R L K+ HDV W SFL
Sbjct: 444 --TMSLEERKERHEKLLKQVLTHDVARWANSFLD 475
Score = 141 bits (357), Expect = 3e-35
Identities = 53/130 (40%), Positives = 71/130 (54%), Gaps = 13/130 (10%)
Query: 1075 KLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDR 1134
K+GFFLHIPFP ++FR PW +EIL+G+LG D++GF E Y NF+D C R LG D
Sbjct: 173 KIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDA 232
Query: 1135 KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK-----------QKIVLGVDR 1183
GR V++ PI I E F + K +K+++GVDR
Sbjct: 233 DIRFNGADGRIVKVGAFPIGIDPEEF--ERALKSPSVQEKVLELKAELGRNKKLIVGVDR 290
Query: 1184 LDYTKGLVHR 1193
LDY+KG+ R
Sbjct: 291 LDYSKGIPQR 300
>gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20. Members
of this family belong to glycosyl transferase family 20.
OtsA (Trehalose-6-phosphate synthase) is homologous to
regions in the subunits of yeast trehalose-6-phosphate
synthase/phosphate complex.
Length = 470
Score = 430 bits (1108), Expect = e-137
Identities = 181/417 (43%), Positives = 248/417 (59%), Gaps = 34/417 (8%)
Query: 119 VHPIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSMPDR---AM 175
V E +D+VS LLK + + V +D + D YYNG N WPLFH
Sbjct: 54 VPVDEDEPKDRVSQLLKE-KFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPPNNEDE 112
Query: 176 FCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADE 235
F W AY +VN+ FADK I+ + D L+W+HDYHLML +R +
Sbjct: 113 FDRSWWDAYVKVNKLFADK------IVEVYKDGD----LIWVHDYHLMLLPQMLR----K 158
Query: 236 QNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLG 295
+ K+GFFLHIPFP +IFR P +EIL+G+LG D++GFH DY +F+ CC R LG
Sbjct: 159 RLPDAKIGFFLHIPFPSSEIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLG 218
Query: 296 CRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK-----------QKIV 344
+ VE+GGRTV + PI I R + + K +K++
Sbjct: 219 LET-TSDGGVEYGGRTVSVGAFPIGIDPGRI--ESGLKSPSVQEKVKELKERFGNKKKLI 275
Query: 345 LGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLV 404
LGVDRLDY KG+ +L AFE LE++PE KV L+QIAVPSR DV+EYQ+L+ ++++LV
Sbjct: 276 LGVDRLDYIKGIPQKLLAFERFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELV 335
Query: 405 GRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINE 464
GRING F T +++P+ +++ + DEL + Y A V LVT LRDGMNLVA E+VACQ +
Sbjct: 336 GRINGEFGTLDYTPVHHLHRSLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQ-QD 394
Query: 465 PPGVLIVSPFAGAGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
GVLI+S FAGA + +++ A++ NP++I+ AE I+ ALTM E+ER R L K
Sbjct: 395 RKGVLILSEFAGAAQSLNDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKY 451
Score = 372 bits (957), Expect = e-116
Identities = 171/455 (37%), Positives = 236/455 (51%), Gaps = 109/455 (23%)
Query: 538 AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKL 597
AY +VN+ FADK I+ + D L+W+HDYHLML +R ++ K+
Sbjct: 120 AYVKVNKLFADK------IVEVYKDGD----LIWVHDYHLMLLPQMLR----KRLPDAKI 165
Query: 598 GFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKN 657
GFFLHIPFP +IFR P +EIL+G+LG D++GFH DY +F+ CC R LG +
Sbjct: 166 GFFLHIPFPSSEIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLET-TSD 224
Query: 658 LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLIESIRN 717
VE+GGRTV + PI I R + + K ++ ++
Sbjct: 225 GGVEYGGRTVSVGAFPIGIDPGRI--ESGLKSPSVQEK----------------VKELK- 265
Query: 718 SIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKV 777
ERF K+K++LGVDRLDY KG+ +L AFE LE++PE KV
Sbjct: 266 ------ERFGN-----------KKKLILGVDRLDYIKGIPQKLLAFERFLEEYPEWRGKV 308
Query: 778 TLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 837
L+QIAVPSR DV+EYQ+L+ ++++LVGRING F T +++P+ +++ + DEL + Y
Sbjct: 309 VLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHLHRSLDFDELIALYAI 368
Query: 838 AAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE-ALICNPYEIDAAA 896
A V LVT LRDGMNLVA E+VACQ + GVLI+S FAGA + +++ A++ NP++I+ A
Sbjct: 369 ADVCLVTSLRDGMNLVAYEYVACQ-QDRKGVLILSEFAGAAQSLNDGAILVNPWDIEEVA 427
Query: 897 EVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIH 956
E I +EAL
Sbjct: 428 EAI--------------------------------------NEAL--------------- 434
Query: 957 RALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLK 991
TM E+ER R L K HDV YW SFL
Sbjct: 435 ---TMSEEERQKRHRKLFKYISKHDVQYWAESFLS 466
Score = 143 bits (363), Expect = 4e-36
Identities = 55/136 (40%), Positives = 76/136 (55%), Gaps = 14/136 (10%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 1128
++ K+GFFLHIPFP +IFR P +EIL+G+LG D++GFH DY +F+ CC R L
Sbjct: 158 KRLPDAKIGFFLHIPFPSSEIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLL 217
Query: 1129 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK-----------QKI 1177
G + VE+GGRTV + PI I R + + K +K+
Sbjct: 218 GLET-TSDGGVEYGGRTVSVGAFPIGIDPGRI--ESGLKSPSVQEKVKELKERFGNKKKL 274
Query: 1178 VLGVDRLDYTKGLVHR 1193
+LGVDRLDY KG+ +
Sbjct: 275 ILGVDRLDYIKGIPQK 290
>gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase
(UDP-forming); Provisional.
Length = 934
Score = 325 bits (835), Expect = 6e-94
Identities = 171/410 (41%), Positives = 227/410 (55%), Gaps = 45/410 (10%)
Query: 133 LLKTLQEK-VMSVHIDPKIFDSYYNGCCNGTFWPLFHSMP----DRAM----FCAEHWRA 183
L K L EK + V +D +I YYNG CN WPLFH + DR F ++ + A
Sbjct: 155 LTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ-FAA 213
Query: 184 YAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLG 243
Y + NQ FAD + + D +VW HDYHLM ++ E N K+G
Sbjct: 214 YKKANQMFADVVNEHYE------EGD----VVWCHDYHLMFLPKCLK----EYNSNMKVG 259
Query: 244 FFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNL 303
+FLH PFP +I R P E+L+ +L D+VGFH DY +FV C R LG +
Sbjct: 260 WFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEG- 318
Query: 304 LVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID---------TKQKIVLGVDRLDYTK 354
VE GR R+ PI I +RF++ A P+V +K++LGVDRLD K
Sbjct: 319 -VEDQGRLTRVAAFPIGIDSDRFIR-ALETPQVQQHIKELKERFAGRKVMLGVDRLDMIK 376
Query: 355 GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTP 414
G+ ++ AFE LE++PE +KV LLQIAVP+RTDV EYQ L ++ ++VGRINGRF T
Sbjct: 377 GIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTL 436
Query: 415 NWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474
PI ++ + L + Y VALVT LRDGMNLV+ EFVACQ + GVLI+S F
Sbjct: 437 TAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DSKKGVLILSEF 495
Query: 475 AGAGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523
AGA + + A++ NP+ I A I +AL MPE+ER KR +H
Sbjct: 496 AGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEER-------EKRHRH 538
Score = 271 bits (695), Expect = 1e-75
Identities = 158/469 (33%), Positives = 215/469 (45%), Gaps = 109/469 (23%)
Query: 531 SLGGNTSAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADE 590
S +AY + NQ FAD + + D +VW HDYHLM ++ E
Sbjct: 206 SFQSQFAAYKKANQMFADVVNEHYE------EGD----VVWCHDYHLMFLPKCLK----E 251
Query: 591 QNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLG 650
N K+G+FLH PFP +I R P E+L+ +L D+VGFH DY +FV C R LG
Sbjct: 252 YNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILG 311
Query: 651 CRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKG 710
+ VE GR R+ PI I +RF++ A P+V +++
Sbjct: 312 LEGTPEG--VEDQGRLTRVAAFPIGIDSDRFIR-ALETPQVQQHIKEL------------ 356
Query: 711 LIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKH 770
ERF +K++LGVDRLD KG+ ++ AFE LE++
Sbjct: 357 ------------KERF------------AGRKVMLGVDRLDMIKGIPQKILAFEKFLEEN 392
Query: 771 PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDE 830
PE +KV LLQIAVP+RTDV EYQ L ++ ++VGRINGRF T PI ++ +
Sbjct: 393 PEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHA 452
Query: 831 LASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPY 890
L + Y VALVT LRDGMNLV+ EFVACQ + GVLI+S FAGA + +
Sbjct: 453 LCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DSKKGVLILSEFAGAAQSL--------- 502
Query: 891 EIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDA 950
GAG A++ NP+ I
Sbjct: 503 -----------------------------------------GAG-----AILVNPWNITE 516
Query: 951 AAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITE 999
A I +AL MPE+ER R + H W +F+ + + E
Sbjct: 517 VAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVE 565
Score = 104 bits (261), Expect = 2e-22
Identities = 52/131 (39%), Positives = 70/131 (53%), Gaps = 12/131 (9%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 1128
E N K+G+FLH PFP +I R P E+L+ +L D+VGFH DY +FV C R L
Sbjct: 251 EYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRIL 310
Query: 1129 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVID---------TKQKIVL 1179
G + VE GR R+ PI I +RF++ A P+V +K++L
Sbjct: 311 GLEGTPEG--VEDQGRLTRVAAFPIGIDSDRFIR-ALETPQVQQHIKELKERFAGRKVML 367
Query: 1180 GVDRLDYTKGL 1190
GVDRLD KG+
Sbjct: 368 GVDRLDMIKGI 378
>gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase
(UDP-forming); Provisional.
Length = 797
Score = 306 bits (784), Expect = 2e-88
Identities = 158/398 (39%), Positives = 225/398 (56%), Gaps = 35/398 (8%)
Query: 133 LLKTLQEK-VMSVHIDPKIFDSYYNGCCNGTFWPLFHSM--P-----DRAMFCAEHWRAY 184
L ++L EK + V ++ ++FD YYNG CN WP+FH M P D + AY
Sbjct: 72 LTESLAEKGCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAY 130
Query: 185 AQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGF 244
+ N+ F D + E D +VW HDYHLM ++ E N K K+G+
Sbjct: 131 KKANRMFLD------VVKENYEEGD----VVWCHDYHLMFLPQYLK----EYNNKMKVGW 176
Query: 245 FLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRVDRKNLL 304
FLH PFP +I++ P E+L+ +L D++GFH D+ +F+ C R LG V+ +
Sbjct: 177 FLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILG--VEGTHEG 234
Query: 305 VEHGGRTVRIRPLPIAIPYERFVQ---LAQAAPRVIDTK-----QKIVLGVDRLDYTKGL 356
V G+ R+ PI I ERF+ L + + + K +K++LGVDRLD KG+
Sbjct: 235 VVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGI 294
Query: 357 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 416
+ AFE LE++PE +KV L+QIAVP+R DV EYQ LK ++ +LVGRINGRF + +
Sbjct: 295 PQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSS 354
Query: 417 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 476
PI ++ + + L + Y V LVT LRDGMNLV+ EFVACQ + GVL++S FAG
Sbjct: 355 VPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAK-KGVLVLSEFAG 413
Query: 477 AGEQMHE-ALICNPYEIDAAAEVIHRALTMPEDERTLR 513
AG+ + AL+ NP+ I + I AL M ++ER R
Sbjct: 414 AGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETR 451
Score = 256 bits (656), Expect = 1e-71
Identities = 150/483 (31%), Positives = 216/483 (44%), Gaps = 115/483 (23%)
Query: 523 HMNCPGQSSLGGNTS------AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYH 576
+M P + + AY + N+ F D + E D +VW HDYH
Sbjct: 108 YMGLPQEDRHDATRTFESQYDAYKKANRMFLD------VVKENYEEGD----VVWCHDYH 157
Query: 577 LMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIED 636
LM ++ E N K K+G+FLH PFP +I++ P E+L+ +L D++GFH D
Sbjct: 158 LMFLPQYLK----EYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYD 213
Query: 637 YCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQ 696
+ +F+ C R LG V+ + V G+ R+ PI I ERF+ P V +
Sbjct: 214 FARHFLSACTRILG--VEGTHEGVVDQGKVTRVAVFPIGIDPERFIN-TCELPEVKQHMK 270
Query: 697 KIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGL 756
++ F +K++LGVDRLD KG+
Sbjct: 271 ELK------------------------RFF------------AGRKVILGVDRLDMIKGI 294
Query: 757 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNW 816
+ AFE LE++PE +KV L+QIAVP+R DV EYQ LK ++ +LVGRINGRF + +
Sbjct: 295 PQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSS 354
Query: 817 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAG 876
PI ++ + + L + Y V LVT LRDGMNLV+ EFVACQ + GVL++S FAG
Sbjct: 355 VPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAK-KGVLVLSEFAG 413
Query: 877 AGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQ 936
AG+ + GAG
Sbjct: 414 AGQSL--------------------------------------------------GAG-- 421
Query: 937 MHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGMGTL 996
AL+ NP+ I + I AL M ++ER R + + K H W F+ + +
Sbjct: 422 ---ALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDI 478
Query: 997 ITE 999
I E
Sbjct: 479 IVE 481
Score = 96.1 bits (239), Expect = 6e-20
Identities = 48/130 (36%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRL 1128
E N K K+G+FLH PFP +I++ P E+L+ +L D++GFH D+ +F+ C R L
Sbjct: 167 EYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRIL 226
Query: 1129 GCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQ---LAQAAPRVIDTK-----QKIVLG 1180
G V+ + V G+ R+ PI I ERF+ L + + + K +K++LG
Sbjct: 227 G--VEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILG 284
Query: 1181 VDRLDYTKGL 1190
VDRLD KG+
Sbjct: 285 VDRLDMIKGI 294
>gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional.
Length = 474
Score = 285 bits (732), Expect = 9e-85
Identities = 145/374 (38%), Positives = 206/374 (55%), Gaps = 26/374 (6%)
Query: 151 FDSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADS 210
+D YYN N WP FH D F W Y +VN ADK L L +++
Sbjct: 73 YDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWEGYLRVNALLADK----LLPLLKDDD--- 125
Query: 211 GTPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGML 270
++WIHDYHL+ A+ +R ++ + ++GFFLHIPFP +IF P DE+L+ +
Sbjct: 126 ---IIWIHDYHLLPFASELR----KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLC 178
Query: 271 GCDMVGFHIEDYCLNFVDCC--QRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQ 328
D++GF E+ L F+DC R+ R + + G+ R PI I + +
Sbjct: 179 DYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSH---TAWGKAFRTEVYPIGIEPDEIAK 235
Query: 329 LAQAA--PRVIDTKQKI-----VLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQ 381
A P++ K ++ + V+RLDY+KGL R A+E LLEK+P+H K+ Q
Sbjct: 236 QAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQ 295
Query: 382 IAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVA 441
IA SR DV+ YQD++ +++ GRING++ W+P+ Y+ + L +R + V
Sbjct: 296 IAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVG 355
Query: 442 LVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHR 501
LVTPLRDGMNLVAKE+VA Q PGVL++S FAGA ++ ALI NPY+ D A + R
Sbjct: 356 LVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDR 415
Query: 502 ALTMPEDERTLRMN 515
ALTMP ER R
Sbjct: 416 ALTMPLAERISRHA 429
Score = 226 bits (577), Expect = 4e-64
Identities = 125/362 (34%), Positives = 188/362 (51%), Gaps = 61/362 (16%)
Query: 539 YAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLG 598
Y +VN ADK L L +++ ++WIHDYHL+ A+ +R ++ + ++G
Sbjct: 106 YLRVNALLADK----LLPLLKDDD------IIWIHDYHLLPFASELR----KRGVNNRIG 151
Query: 599 FFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC--QRRLGCRVDRK 656
FFLHIPFP +IF P DE+L+ + D++GF E+ L F+DC R+ R +
Sbjct: 152 FFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKS 211
Query: 657 NLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA--PRVIDTKQKIVLGVDRLDYTKGLIES 714
+ G+ R PI I + + A P++ K ++ ++
Sbjct: 212 H---TAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAEL--------------KN 254
Query: 715 IRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHL 774
++N + V+RLDY+KGL R A+E LLEK+P+H
Sbjct: 255 VQNIFS--------------------------VERLDYSKGLPERFLAYEALLEKYPQHH 288
Query: 775 EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASF 834
K+ QIA SR DV+ YQD++ +++ GRING++ W+P+ Y+ + L
Sbjct: 289 GKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKI 348
Query: 835 YRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDA 894
+R + V LVTPLRDGMNLVAKE+VA Q PGVL++S FAGA ++ ALI NPY+ D
Sbjct: 349 FRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDE 408
Query: 895 AA 896
A
Sbjct: 409 VA 410
Score = 98.7 bits (246), Expect = 3e-21
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Query: 905 GMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPED 964
GMNLVAKE+VA Q PGVL++S FAGA ++ ALI NPY+ D A + RALTMP
Sbjct: 363 GMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLA 422
Query: 965 ERTLRMNYLRKREKVHDVNYWMRSFLKGMGTLITEDGDDVLPTTLIADEQN 1015
ER R + +D+N+W F+ D ++P + + +++
Sbjct: 423 ERISRHAEMLDVIVKNDINHWQECFIS--------DLKQIVPRSAESQQRD 465
Score = 74.0 bits (182), Expect = 2e-13
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 12/128 (9%)
Query: 1075 KLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCC--QRRLGCRV 1132
++GFFLHIPFP +IF P DE+L+ + D++GF E+ L F+DC R+ R
Sbjct: 149 RIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRS 208
Query: 1133 DRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA--PRVIDTKQKI-----VLGVDRLD 1185
+ + G+ R PI I + + A P++ K ++ + V+RLD
Sbjct: 209 GKSH---TAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLD 265
Query: 1186 YTKGLVHR 1193
Y+KGL R
Sbjct: 266 YSKGLPER 273
Score = 42.0 bits (99), Expect = 0.002
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 1019 KLGFFLHIPFPPWDIFRLFPWSDEILQGM 1047
++GFFLHIPFP +IF P DE+L+ +
Sbjct: 149 RIGFFLHIPFPTPEIFNALPPHDELLEQL 177
>gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase.
Glucosylglycerol-phosphate synthase catalyzes the key
step in the biosynthesis of the osmolyte
glucosylglycerol. It is known in several cyanobacteria
and in Pseudomonas anguilliseptica. The enzyme is
closely related to the alpha,alpha-trehalose-phosphate
synthase, likewise involved in osmolyte biosynthesis, of
E. coli and many other bacteria. A close homolog from
Xanthomonas campestris is excluded from this model and
scores between trusted and noise.
Length = 487
Score = 274 bits (701), Expect = 2e-80
Identities = 139/391 (35%), Positives = 216/391 (55%), Gaps = 44/391 (11%)
Query: 152 DSYYNGCCNGTFWPLFHSMPDRAMFCAEHWRAYAQVNQEFADKTIKALQILAQEEPADSG 211
D +Y+ FWP+ H+ P+R F + W+ + +VN+ FA+ A E A+
Sbjct: 83 DIFYHITSKEAFWPILHTFPERFQFREDDWQVFLKVNRAFAEA--------ACLEAAEGA 134
Query: 212 TPLVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLG 271
T VW+HDY+L L IR + K+ FF H PFP D+F + PW ++I+ +L
Sbjct: 135 T--VWVHDYNLWLVPGYIR----QLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLC 188
Query: 272 CDMVGFHIEDYCLNFVD---------------CCQR--RLGCRV--DRKNLLVEHGGRTV 312
CD +GFHI Y NFVD R +G + +R ++ G R V
Sbjct: 189 CDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVV 248
Query: 313 RIRPLPIAIPYERFVQLAQAAPRVIDTKQKI---------VLGVDRLDYTKGLVHRLKAF 363
++ P+ ER ++ A AA + + ++I +L +R+DYTKG++ +L A+
Sbjct: 249 KLGAHPVGTDPER-IRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAY 307
Query: 364 ETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIY 423
E LLE+ PE L KVTL+ VP+ + + Y +L+ +++Q VGRINGRF W+P+++
Sbjct: 308 ERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFT 367
Query: 424 GCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE 483
+ +E+++++ A V +TPLRDG+NLVAKE+VA Q GVL++S FAGA ++
Sbjct: 368 RSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQ-GLLDGVLVLSEFAGAAVELKG 426
Query: 484 ALICNPYEIDAAAEVIHRALTMPEDERTLRM 514
AL+ NPY+ E I+ AL MP+ E+ RM
Sbjct: 427 ALLTNPYDPVRMDETIYVALAMPKAEQQARM 457
Score = 228 bits (583), Expect = 7e-65
Identities = 139/473 (29%), Positives = 214/473 (45%), Gaps = 127/473 (26%)
Query: 539 YAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQNLKFKLG 598
+ +VN+ FA+ A E A+ T VW+HDY+L L IR + K+
Sbjct: 115 FLKVNRAFAEA--------ACLEAAEGAT--VWVHDYNLWLVPGYIR----QLRPDLKIA 160
Query: 599 FFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVD--------------- 643
FF H PFP D+F + PW ++I+ +L CD +GFHI Y NFVD
Sbjct: 161 FFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQN 220
Query: 644 CCQR--RLGCRV--DRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKIV 699
R +G + +R ++ G R V++ P+ ER ++ A AA +
Sbjct: 221 VDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPER-IRSALAAASI-------- 271
Query: 700 LGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHR 759
+ ++E IR+ +A K++L +R+DYTKG++ +
Sbjct: 272 ---------REMMERIRSELA-------------------GVKLILSAERVDYTKGILEK 303
Query: 760 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819
L A+E LLE+ PE L KVTL+ VP+ + + Y +L+ +++Q VGRINGRF W+P+
Sbjct: 304 LNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPL 363
Query: 820 RYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 879
++ + +E+++++ A V +TPLRDG+NLVAKE+VA Q GVL++S FAGA
Sbjct: 364 QFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQ-GLLDGVLVLSEFAGAAV 422
Query: 880 QMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGEQMHE 939
++ AL+ NPY +M E
Sbjct: 423 ELKGALLTNPY------------------------------------------DPVRMDE 440
Query: 940 ALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKG 992
I+ AL MP+ E+ RM + +DV W FL
Sbjct: 441 T--------------IYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAA 479
Score = 81.1 bits (200), Expect = 1e-15
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 29/149 (19%)
Query: 1069 EQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVD------ 1122
+ K+ FF H PFP D+F + PW ++I+ +L CD +GFHI Y NFVD
Sbjct: 152 QLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLM 211
Query: 1123 ---------CCQR--RLGCRV--DRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPR 1169
R +G + +R ++ G R V++ P+ ER ++ A AA
Sbjct: 212 PLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPER-IRSALAAAS 270
Query: 1170 VIDTKQKI---------VLGVDRLDYTKG 1189
+ + ++I +L +R+DYTKG
Sbjct: 271 IREMMERIRSELAGVKLILSAERVDYTKG 299
>gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase
[UDP-forming].
Length = 854
Score = 241 bits (616), Expect = 4e-66
Identities = 152/432 (35%), Positives = 220/432 (50%), Gaps = 52/432 (12%)
Query: 123 PTEFEDKVSDLLKTLQEKVMSVHIDPKIFDSYYNGCCNGTFWPLFHSM----PDRA-MFC 177
E E+ LL+T K + + P +F YY+G C WPLFH M PD F
Sbjct: 119 LNEQEEVSQILLETF--KCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFN 176
Query: 178 AEHWRAYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHLMLAANTIRNIADEQN 237
W+AY VN+ FAD+ ++ + P D VWIHDYHLM+ +R +
Sbjct: 177 RSLWQAYVSVNKIFADRIMEVIN------PEDD---FVWIHDYHLMVLPTFLRKRFN--- 224
Query: 238 LKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCR 297
+ KLGFFLH PFP +I++ P +E+L+ +L D++GFH DY +F+ CC R LG
Sbjct: 225 -RVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLS 283
Query: 298 VDRKN--LLVEHGGRTVRIRPLPIAIPY----------ERFVQLAQAAPRVIDTKQKIVL 345
+ K + +E+ GRTV I+ LP+ I E ++ + + D + ++L
Sbjct: 284 YESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLL 343
Query: 346 GVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 405
GVD +D KG+ +L A E LL +HPE KV L+QIA P+R K+ ++++ E V
Sbjct: 344 GVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVK 403
Query: 406 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEF-VACQINE 464
RIN F P + PI I + E ++Y A LVT +RDGMNL+ E+ ++ Q NE
Sbjct: 404 RINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNE 463
Query: 465 -------------PPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERT 511
+L+VS F G + A+ NP+ IDA A+ + AL M E E+
Sbjct: 464 KLDKLLGLEPSTPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQ 523
Query: 512 LRMNYLRKREKH 523
LR EKH
Sbjct: 524 LR------HEKH 529
Score = 208 bits (530), Expect = 3e-55
Identities = 148/478 (30%), Positives = 219/478 (45%), Gaps = 97/478 (20%)
Query: 523 HMNCPGQSSLGG--NTS---AYAQVNQEFADKTIKALQILAQEEPADSGTPLVWIHDYHL 577
H P LGG N S AY VN+ FAD+ ++ + P D VWIHDYHL
Sbjct: 162 HYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVIN------PEDD---FVWIHDYHL 212
Query: 578 MLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDY 637
M+ +R + + KLGFFLH PFP +I++ P +E+L+ +L D++GFH DY
Sbjct: 213 MVLPTFLRKRFN----RVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDY 268
Query: 638 CLNFVDCCQRRLGCRVDRKN--LLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVIDTK 695
+F+ CC R LG + K + +E+ GRTV I+ LP+ I + Q+ + +T+
Sbjct: 269 ARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQL----QSVLSLPETE 324
Query: 696 QKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKG 755
K+ K LI+ + D + ++LGVD +D KG
Sbjct: 325 AKV----------KELIK---------------------QFCDQDRIMLLGVDDMDIFKG 353
Query: 756 LVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 815
+ +L A E LL +HPE KV L+QIA P+R K+ ++++ E V RIN F P
Sbjct: 354 ISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPG 413
Query: 816 WSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFA 875
+ PI I + E ++Y A LVT +RDGMNL+ E++ +
Sbjct: 414 YDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISR-------------- 459
Query: 876 GAGEQMHEALICNPYEIDAAAEVIFCPYLGMNLVAKEFVACQINEPPGVLIVSPFAGAGE 935
E++ + L P +L+VS F G
Sbjct: 460 QGNEKLDKLLGLEPS----------------------------TPKKSMLVVSEFIGCSP 491
Query: 936 QMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKVHDVNYWMRSFLKGM 993
+ A+ NP+ IDA A+ + AL M E E+ LR + HDV YW RSFL+ +
Sbjct: 492 SLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDL 549
Score = 91.2 bits (226), Expect = 2e-18
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 12/130 (9%)
Query: 1073 KFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGFHIEDYCLNFVDCCQRRLGCRV 1132
+ KLGFFLH PFP +I++ P +E+L+ +L D++GFH DY +F+ CC R LG
Sbjct: 225 RVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSY 284
Query: 1133 DRKN--LLVEHGGRTVRIRPLPIAIPY----------ERFVQLAQAAPRVIDTKQKIVLG 1180
+ K + +E+ GRTV I+ LP+ I E ++ + + D + ++LG
Sbjct: 285 ESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLG 344
Query: 1181 VDRLDYTKGL 1190
VD +D KG+
Sbjct: 345 VDDMDIFKGI 354
>gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase. This family
consist of trehalose-phosphatases EC:3.1.3.12 these
enzyme catalyze the de-phosphorylation of
trehalose-6-phosphate to trehalose and orthophosphate.
The aligned region is present in trehalose-phosphatases
and comprises the entire length of the protein it is
also found in the C-terminus of trehalose-6-phosphate
synthase EC:2.4.1.15 adjacent to the
trehalose-6-phosphate synthase domain - pfam00982. It
would appear that the two equivalent genes in the E.
coli otsBA operon otsA the trehalose-6-phosphate
synthase and otsB trehalose-phosphatase (this family)
have undergone gene fusion in most eukaryotes. Trehalose
is a common disaccharide of bacteria, fungi and
invertebrates that appears to play a major role in
desiccation tolerance.
Length = 235
Score = 88.5 bits (220), Expect = 2e-19
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 42 LLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLT 101
LDYDGTL+PI PD AV + L +LA+ P ++IISGR+ G+ L
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFEDLFFGVPNLG 60
Query: 102 YAGNHGLEIIHPDG-SRFVHPIPTEFEDKVSDLLKTLQEKV 141
A HG I P G + + K ++ L+E
Sbjct: 61 LAAEHGAFIRDPGGEDWTNLAEVEDLDWK-KEVAAILEEYT 100
Score = 68.9 bits (169), Expect = 1e-12
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 1399 LLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLT 1458
LDYDGTL+PI PD AV + L +LA+ P ++IISGR+ G+ L
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFEDLFFGVPNLG 60
Query: 1459 YA 1460
A
Sbjct: 61 LA 62
>gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and
metabolism].
Length = 266
Score = 89.0 bits (221), Expect = 3e-19
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 22 LEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHIS 81
++ L Y+ K L LDYDGTL I PHP+ AV + LQ LA+ P ++
Sbjct: 3 ALQSNQLLEPYL-NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVA 61
Query: 82 IISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGS 116
IISGR++ + + G+ G+ HG E+ P+G
Sbjct: 62 IISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGK 96
Score = 71.6 bits (176), Expect = 2e-13
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 1379 LEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHIS 1438
++ L Y+ K L LDYDGTL I PHP+ AV + LQ LA+ P ++
Sbjct: 3 ALQSNQLLEPYL-NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVA 61
Query: 1439 IISGRNVHNVMEMVGIEGLTYA 1460
IISGR++ + + G+ G+
Sbjct: 62 IISGRSLAELERLFGVPGIGLI 83
>gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase. Trehalose, a neutral
disaccharide of two glucose residues, is an important
osmolyte for dessication and/or salt tolerance in a
number of prokaryotic and eukaryotic species, including
E. coli, Saccharomyces cerevisiae, and Arabidopsis
thaliana. Many bacteria also utilize trehalose in the
synthesis of trehalolipids, specialized cell wall
constituents believed to be involved in the uptake of
hydrophobic substances. Trehalose dimycolate (TDM, cord
factor) and related substances are important
constituents of the mycobacterial waxy coat and
responsible for various clinically important
immunological interactions with host organism. This
enzyme, trehalose-phosphatase, removes a phosphate group
in the final step of trehalose biosynthesis. The
trehalose-phosphatase from Saccharomyces cerevisiae is
fused to the synthase. At least 18 distinct sequences
from Arabidopsis have been identified, roughly half of
these are of the fungal type, with a fused synthase and
half are like the bacterial members having only the
phosphatase domain. It has been suggested that trehalose
is being used in Arabidopsis as a regulatory molecule in
development and possibly other processes [Cellular
processes, Adaptations to atypical conditions].
Length = 244
Score = 87.2 bits (216), Expect = 7e-19
Identities = 36/79 (45%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 97
K A DYDGTL+ I P PD AV+ + LQKLA P I IISGR V +
Sbjct: 3 KRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKL 62
Query: 98 EGLTYAGNHGLEIIHPDGS 116
GL AG HG E+ +GS
Sbjct: 63 PGLGLAGEHGCEMK-DNGS 80
Score = 74.1 bits (182), Expect = 2e-14
Identities = 30/66 (45%), Positives = 34/66 (51%)
Query: 1395 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGI 1454
K A DYDGTL+ I P PD AV+ + LQKLA P I IISGR V +
Sbjct: 3 KRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKL 62
Query: 1455 EGLTYA 1460
GL A
Sbjct: 63 PGLGLA 68
>gnl|CDD|177812 PLN02151, PLN02151, trehalose-phosphatase.
Length = 354
Score = 74.3 bits (182), Expect = 9e-14
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 16/147 (10%)
Query: 8 LSKNELFILKGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKR 67
+K +I + L F+E L K G ++ + LDYDGTL+PI PD A + ++ +
Sbjct: 70 FNKQSCWIKEHPSALNMFEEILHKSEG--KQIVMFLDYDGTLSPIVDDPDRAFMSKKMRN 127
Query: 68 TLQKLAN-LPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPD-GSRF------- 118
T++KLA P +I+SGR V V + L YAG+HG++I P+ GS++
Sbjct: 128 TVRKLAKCFP---TAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSL 184
Query: 119 -VHPIPTEFEDKVSDLLKTLQEKVMSV 144
P TEF ++++ K L EK S+
Sbjct: 185 LCQP-ATEFLPVINEVYKKLVEKTKSI 210
Score = 59.3 bits (143), Expect = 7e-09
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 1373 TMQPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLAN- 1431
P L F+E L K G ++ + LDYDGTL+PI PD A + ++ + T++KLA
Sbjct: 78 KEHPSALNMFEEILHKSEG--KQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC 135
Query: 1432 LPDVHISIISGRNVHNVMEMVGIEGLTYA 1460
P +I+SGR V V + L YA
Sbjct: 136 FP---TAIVSGRCREKVSSFVKLTELYYA 161
>gnl|CDD|215317 PLN02580, PLN02580, trehalose-phosphatase.
Length = 384
Score = 71.8 bits (176), Expect = 6e-13
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 38 KLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLAN-LPDVHISIISGRNVHNVMEMVG 96
K+AL LDYDGTL+PI PD A++ + + ++ +A P +IISGR+ V E+VG
Sbjct: 119 KIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYFP---TAIISGRSRDKVYELVG 175
Query: 97 IEGLTYAGNHGLEIIHP 113
+ L YAG+HG++I+ P
Sbjct: 176 LTELYYAGSHGMDIMGP 192
Score = 57.9 bits (140), Expect = 2e-08
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 1354 ILKGMGTLITEDGDDVLPTTMQ---PVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIA 1410
+ K + D T P L F++ + G K+AL LDYDGTL+PI
Sbjct: 77 LNKDFNVELASPDTDFAYRTWMLKYPSALTSFEQIANFAKG--KKIALFLDYDGTLSPIV 134
Query: 1411 PHPDMAVLPEETKRTLQKLAN-LPDVHISIISGRNVHNVMEMVGIEGLTYA 1460
PD A++ + + ++ +A P +IISGR+ V E+VG+ L YA
Sbjct: 135 DDPDRALMSDAMRSAVKNVAKYFP---TAIISGRSRDKVYELVGLTELYYA 182
>gnl|CDD|178591 PLN03017, PLN03017, trehalose-phosphatase.
Length = 366
Score = 66.6 bits (162), Expect = 3e-11
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 14 FILKGMGTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLA 73
+I++ LE F++ + G ++ + LDYDGTL+PI PD A + + +RT++KLA
Sbjct: 89 WIMQHPSALEMFEQIMEASRG--KQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA 146
Query: 74 N-LPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDG--SRFVHPIPTEFEDKV 130
P +I++GR + V V + L YAG+HG++I P SR +
Sbjct: 147 KCFP---TAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPA 203
Query: 131 SDLLKTLQE 139
+D L + E
Sbjct: 204 NDYLPMIDE 212
Score = 55.4 bits (133), Expect = 1e-07
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 1375 QPVTLEDFDEYLSKYIGTTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLAN-LP 1433
P LE F++ + G ++ + LDYDGTL+PI PD A + + +RT++KLA P
Sbjct: 93 HPSALEMFEQIMEASRG--KQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFP 150
Query: 1434 DVHISIISGRNVHNVMEMVGIEGLTYA 1460
+I++GR + V V + L YA
Sbjct: 151 ---TAIVTGRCIDKVYNFVKLAELYYA 174
>gnl|CDD|182291 PRK10187, PRK10187, trehalose-6-phosphate phosphatase; Provisional.
Length = 266
Score = 60.1 bits (146), Expect = 1e-09
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 35 TTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEM 94
+ A D DGTLA I PHPD V+P+ + LQ LA D +++ISGR+ M
Sbjct: 11 LSANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRS------M 64
Query: 95 VGIEGLTY------AGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKT 136
V ++ L AG HG E +G + +P +S L T
Sbjct: 65 VELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHT 112
Score = 57.1 bits (138), Expect = 1e-08
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 1392 TTNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGR 1443
+ A D DGTLA I PHPD V+P+ + LQ LA D +++ISGR
Sbjct: 11 LSANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGR 62
>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the
GT1 family of glycosyltransferases and named after YqgM
in Bacillus licheniformis about which little is known.
Glycosyltransferases catalyze the transfer of sugar
moieties from activated donor molecules to specific
acceptor molecules, forming glycosidic bonds. The
acceptor molecule can be a lipid, a protein, a
heterocyclic compound, or another carbohydrate residue.
This group of glycosyltransferases is most closely
related to the previously defined glycosyltransferase
family 1 (GT1). The members of this family may transfer
UDP, ADP, GDP, or CMP linked sugars. The diverse
enzymatic activities among members of this family
reflect a wide range of biological functions. The
protein structure available for this family has the GTB
topology, one of the two protein topologies observed for
nucleotide-sugar-dependent glycosyltransferases. GTB
proteins have distinct N- and C- terminal domains each
containing a typical Rossmann fold. The two domains have
high structural homology despite minimal sequence
homology. The large cleft that separates the two domains
includes the catalytic center and permits a high degree
of flexibility. The members of this family are found
mainly in certain bacteria and archaea.
Length = 374
Score = 58.9 bits (143), Expect = 8e-09
Identities = 60/248 (24%), Positives = 97/248 (39%), Gaps = 41/248 (16%)
Query: 291 QRRLGCRVDR--------KNLLVEHGGRTV-RIRPLPIAIPYERF--VQLAQAAPRVIDT 339
+RR R DR + L E GG +I +P + ERF A I
Sbjct: 138 ERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGIPE 197
Query: 340 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEE 399
+ ++L V RL KG+ L+A L +++P+ V L+ I D ++L+
Sbjct: 198 DEPVILFVGRLVPRKGVDLLLEALAKLRKEYPD----VRLV-IV----GDGPLREELEAL 248
Query: 400 MDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVA 459
+L F G + ++L + Y A V ++ L +G LV E +A
Sbjct: 249 AAELGLGDRVTFL-----------GFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMA 297
Query: 460 CQINEPPGV-LIVSPFAGAGEQMHE---ALICNPYEIDAAAEVIHRALTMPEDERTLRMN 515
G+ ++ S G E + + L+ P + +A AE I R L PE R L
Sbjct: 298 A------GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEA 351
Query: 516 YLRKREKH 523
+ +
Sbjct: 352 ARERVAER 359
Score = 47.0 bits (112), Expect = 6e-05
Identities = 51/249 (20%), Positives = 90/249 (36%), Gaps = 40/249 (16%)
Query: 662 HGGRTVRIRPLPIAIPYERFVQ---LAQAAPRVI----DTKQKIVLGVDRLDYTKGLIES 714
HG R + + A R+I T++++ + I
Sbjct: 116 HGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELR---ELGGVPPEKITV 172
Query: 715 IRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHL 774
I N + R A I + ++L V RL KG+ L+A L +++P+
Sbjct: 173 IPNGVDTERFRPAPRAARRRLGIPEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPD-- 230
Query: 775 EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASF 834
V L+ I D ++L+ +L F G + ++L +
Sbjct: 231 --VRLV-IV----GDGPLREELEALAAELGLGDRVTFL-----------GFVPDEDLPAL 272
Query: 835 YRDAAVALVTPLRDGMNLVAKEFVACQINEPPGV-LIVSPFAGAGEQMHE---ALICNPY 890
Y A V ++ L +G LV E +A G+ ++ S G E + + L+ P
Sbjct: 273 YAAADVFVLPSLYEGFGLVLLEAMAA------GLPVVASDVGGIPEVVEDGETGLLVPPG 326
Query: 891 EIDAAAEVI 899
+ +A AE I
Sbjct: 327 DPEALAEAI 335
>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer
membrane].
Length = 381
Score = 53.4 bits (127), Expect = 5e-07
Identities = 54/314 (17%), Positives = 103/314 (32%), Gaps = 43/314 (13%)
Query: 214 LVWIHDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCD 273
++ H L + + + IP L
Sbjct: 86 IIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLL-----------G 134
Query: 274 MVGFHIEDYCLNFVDCCQRRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAA 333
++ ++ R + K LL G +I +P I E+F
Sbjct: 135 LLRLLLKRLKKALRLLADRVIAVSPALKELLEALGVPN-KIVVIPNGIDTEKFAPARIGL 193
Query: 334 PRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEY 393
+ + +VL V RLD KGL ++A L ++ P+ + L+ + +
Sbjct: 194 LP--EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIVGDGP----ERR 243
Query: 394 QDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLV 453
++L++ +L N +F + +ELA A V ++ L +G LV
Sbjct: 244 EELEKLAKKLGLEDNVKFLGY-----------VPDEELAELLASADVFVLPSLSEGFGLV 292
Query: 454 AKEFVACQINEPPGVLIVSPFAGAG----EQMHEALICNPYEIDAAAEVIHRALTMPEDE 509
E +A G +++ G E L+ P +++ A+ + + L PE
Sbjct: 293 LLEAMAA------GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELR 346
Query: 510 RTLRMNYLRKREKH 523
L + E+
Sbjct: 347 EELGEAARERVEEE 360
Score = 39.9 bits (92), Expect = 0.010
Identities = 49/338 (14%), Positives = 107/338 (31%), Gaps = 45/338 (13%)
Query: 573 HDYHLMLAANTIRNIADEQNLKFKLGFFLHIPFPPWDIFRLFPWSDEILQGMLGCDMVGF 632
+ +++ A + L+ + + L D++
Sbjct: 33 RGHEVLVIAPEKLEGLGIEVLRLPSVSLPLLIVRLRPALLRLLLLLKRLLPY---DIIHA 89
Query: 633 HIEDYCLNFVDCCQRRLGCRVDRKNLLVEHG-------GRTVRIRPLPIAIPYERFVQLA 685
H + L + ++ HG + + + + +R +
Sbjct: 90 HSLLLAPGGLLA--LLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKKAL 147
Query: 686 QAAPRVIDTKQKIVLGVDRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVL 745
+ + + + I I N I E+F + + +VL
Sbjct: 148 RLLADRVIAVSPALKELLEALGVPNKIVVIPNGIDT--EKFAPARIGLLP--EGGKFVVL 203
Query: 746 GVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVG 805
V RLD KGL ++A L ++ P+ + L+ + + ++L++ +L
Sbjct: 204 YVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIVGDGP----ERREELEKLAKKLGL 255
Query: 806 RINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEP 865
N +F + +ELA A V ++ L +G LV E +A
Sbjct: 256 EDNVKFLGY-----------VPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA----- 299
Query: 866 PGVLIVSPFAGAG----EQMHEALICNPYEIDAAAEVI 899
G +++ G E L+ P +++ A+ +
Sbjct: 300 -GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADAL 336
>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1.
Mutations in this domain of human PIGA lead to disease
(Paroxysmal Nocturnal haemoglobinuria). Members of this
family transfer activated sugars to a variety of
substrates, including glycogen, Fructose-6-phosphate and
lipopolysaccharides. Members of this family transfer
UDP, ADP, GDP or CMP linked sugars. The eukaryotic
glycogen synthases may be distant members of this
family.
Length = 158
Score = 50.3 bits (121), Expect = 6e-07
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 33/186 (17%)
Query: 340 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEE 399
+ I+L V RL KGL L+AF L E+HP L I D +E + LK+
Sbjct: 1 DKPIILFVGRLVPEKGLDLLLEAFALLKEQHPN-----LKLVIV----GDGEEEKKLKKL 51
Query: 400 MDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVA 459
+L N F G + ++L YR A + ++ +G LV E +A
Sbjct: 52 ALKLGLEDNVIFV-----------GFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMA 100
Query: 460 CQINEPPGV-LIVSPFAGAGEQM---HEALICNPYEIDAAAEVIHRALTMPEDERTLRMN 515
GV +I + G E + L+ +P + +A AE I + L +DE
Sbjct: 101 A------GVPVIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLL---KDEELRERL 151
Query: 516 YLRKRE 521
R+
Sbjct: 152 GENARK 157
Score = 46.9 bits (112), Expect = 1e-05
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 30/164 (18%)
Query: 740 KQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEE 799
+ I+L V RL KGL L+AF L E+HP L I D +E + LK+
Sbjct: 1 DKPIILFVGRLVPEKGLDLLLEAFALLKEQHPN-----LKLVIV----GDGEEEKKLKKL 51
Query: 800 MDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVA 859
+L N F G + ++L YR A + ++ +G LV E +A
Sbjct: 52 ALKLGLEDNVIFV-----------GFVPDEDLIELYRIADLFVLPSRYEGFGLVLLEAMA 100
Query: 860 CQINEPPGV-LIVSPFAGAGEQM---HEALICNPYEIDAAAEVI 899
GV +I + G E + L+ +P + +A AE I
Sbjct: 101 A------GVPVIATDVGGPAEIVKDGETGLLVDPGDAEALAEAI 138
>gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General
function prediction only].
Length = 264
Score = 47.8 bits (114), Expect = 2e-05
Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 20/214 (9%)
Query: 36 TNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRN---VHNVM 92
L D DGTL + + ETK L +L V + + +GR V +++
Sbjct: 1 MMIKLLAFDLDGTLL----DSNKTI-SPETKEALARLREK-GVKVVLATGRPLPDVLSIL 54
Query: 93 EMVGIEGLTYAGNHGLEIIHPDGSRFVHPIPTEFEDKVSDLLKTLQEKVMSVHIDPKIFD 152
E +G++G N G I + F P+ E +++ +LL+ Q + ++ D I+
Sbjct: 55 EELGLDGPLITFN-GALIYNGGELLFQKPLSREDVEELLELLEDFQGIALVLYTDDGIYL 113
Query: 153 SYYNGCCNGTFWPLFHSMPDRAMFCAEHW-RAYAQVNQEFADKTIKALQILAQEEPADSG 211
+ + + + + ++ L ++ D G
Sbjct: 114 TKKR---GTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLG 170
Query: 212 TPLVWIHDYHLMLA------ANTIRNIADEQNLK 239
+ L + ++ +A +K
Sbjct: 171 LTVSSSGPISLDITPKGVSKGYALQRLAKLLGIK 204
Score = 35.5 bits (82), Expect = 0.16
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 1393 TNKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVME 1450
L D DGTL + + ETK L +L V + + +GR + +V+
Sbjct: 1 MMIKLLAFDLDGTLL----DSNKTI-SPETKEALARLREK-GVKVVLATGRPLPDVLS 52
>gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the
GT1 family of glycosyltransferases. Bme6 in Brucella
melitensis has been shown to be involved in the
biosynthesis of a polysaccharide.
Length = 375
Score = 48.5 bits (116), Expect = 2e-05
Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 28/185 (15%)
Query: 342 KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMD 401
+I+L + RL KGL ++AF L E+ P+ L+ IA P D Y+ +++
Sbjct: 204 RIILFLGRLHPKKGLDLLIEAFAKLAERFPD----WHLV-IAGP---DEGGYRAELKQIA 255
Query: 402 QLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD-GMNLVAKEFVAC 460
+G + R T G + ++ A+ DA + V P +V E +AC
Sbjct: 256 AALG-LEDRVT---------FTGMLYGEDKAAALADADL-FVLPSHSENFGIVVAEALAC 304
Query: 461 QINEPPGV-LIVSPFAG-AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLR 518
G ++ + + ++DA A + RAL +P+ + + N
Sbjct: 305 ------GTPVVTTDKVPWQELIEYGCGWVVDDDVDALAAALRRALELPQRLKAMGENGRA 358
Query: 519 KREKH 523
E+
Sbjct: 359 LVEER 363
Score = 39.2 bits (92), Expect = 0.014
Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 28/161 (17%)
Query: 742 KIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMD 801
+I+L + RL KGL ++AF L E+ P+ L+ IA P D Y+ +++
Sbjct: 204 RIILFLGRLHPKKGLDLLIEAFAKLAERFPD----WHLV-IAGP---DEGGYRAELKQIA 255
Query: 802 QLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD-GMNLVAKEFVAC 860
+G + R T G + ++ A+ DA + V P +V E +AC
Sbjct: 256 AALG-LEDRVT---------FTGMLYGEDKAAALADADL-FVLPSHSENFGIVVAEALAC 304
Query: 861 QINEPPGV-LIVSPFAG-AGEQMHEALICNPYEIDAAAEVI 899
G ++ + + ++DA A +
Sbjct: 305 ------GTPVVTTDKVPWQELIEYGCGWVVDDDVDALAAAL 339
>gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB.
This subfamily falls within the Haloacid Dehalogenase
(HAD) superfamily of aspartate-nucleophile hydrolases.
The Class II subfamilies are characterized by a domain
that is located between the second and third conserved
catalytic motifs of the superfamily domain. The IIB
subfamily is distinguished from the IIA subfamily
(TIGR01460) by homology and the predicted secondary
structure of this domain by PSI-PRED. The IIB
subfamily's Class II domain has the following predicted
structure: Helix-Sheet-Sheet-(Helix or
Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB
subfamily consists of Trehalose-6-phosphatase
(TIGR00685), plant and cyanobacterial
Sucrose-phosphatase and a closely related group of
bacterial and archaeal sequences, eukaryotic
phosphomannomutase (pfam03332), a large subfamily
("Cof-like hydrolases", TIGR00099) containing many
closely related bacterial sequences, a hypothetical
equivalog containing the E. coli YedP protein, as well
as two small clusters containing OMNI|TC0379 and
OMNI|SA2196 whose relationship to the other groups is
unclear [Unknown function, Enzymes of unknown
specificity].
Length = 204
Score = 43.1 bits (102), Expect = 3e-04
Identities = 41/196 (20%), Positives = 68/196 (34%), Gaps = 32/196 (16%)
Query: 40 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEG 99
L D DGTL P+ L ET L++L V + +++GR++ + E++
Sbjct: 1 LLFFDLDGTLLD----PNAHELSPETIEALERLRE-AGVKVVLVTGRSLAEIKELLKQLP 55
Query: 100 LTYAGNHGLEIIHPDGSRFVHP------IPTEFEDKVSDLLKTLQEKVMSVHIDPKI-FD 152
L +G I +P ++ P I E+ ++L + V + D I
Sbjct: 56 LPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVA 115
Query: 153 SYYNGCCNGTFWPLFHSMPDRAMFCA--EHWRAYAQVNQEFADKTI-----------KAL 199
+Y G G D M + R ++ + KT AL
Sbjct: 116 IHYVGAELGQEL-------DSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSAL 168
Query: 200 QILAQEEPADSGTPLV 215
Q L +E L
Sbjct: 169 QALLKELNGKRDEILA 184
Score = 35.8 bits (83), Expect = 0.10
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 1397 ALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGR 1443
L D DGTL P+ L ET L++L V + +++GR
Sbjct: 1 LLFFDLDGTLLD----PNAHELSPETIEALERLRE-AGVKVVLVTGR 42
>gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related
to the GT1 family of glycosyltransferases. The
sucrose-phosphate synthases in this family may be unique
to plants and photosynthetic bacteria. This enzyme
catalyzes the synthesis of sucrose 6-phosphate from
fructose 6-phosphate and uridine 5'-diphosphate-glucose,
a key regulatory step of sucrose metabolism. The
activity of this enzyme is regulated by phosphorylation
and moderated by the concentration of various
metabolites and light.
Length = 398
Score = 44.5 bits (106), Expect = 4e-04
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 37/233 (15%)
Query: 304 LVEHGG-RTVRIRPLPIAIPYERFV----QLAQAAPRVIDTKQKIVLGVDRLDYTKGLVH 358
L G RIR +P + ERF A+ A + D + +L V RLD
Sbjct: 178 LYSLYGAYPRRIRVVPPGVDLERFTPYGRAEARRARLLRDPDKPRILAVGRLD------- 230
Query: 359 RLKAFETLLE---KHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPN 415
K +TL+ + PE E+ L+ + P + ++ E+ + +G I+
Sbjct: 231 PRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVID------- 283
Query: 416 WSPIRYIY-GCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPF 474
R + G +S+++L + YR A V + L + L A E +AC G+ +V+
Sbjct: 284 ----RVDFPGRVSREDLPALYRAADVFVNPALYEPFGLTALEAMAC------GLPVVATA 333
Query: 475 AG----AGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKREKH 523
G L+ +P + +A A + R LT P R L LR+
Sbjct: 334 VGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLRRARAR 386
Score = 40.2 bits (95), Expect = 0.008
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 22/135 (16%)
Query: 730 AQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKAFETLLE---KHPEHLEKVTLLQIAVPS 786
A+ A + D + +L V RLD K +TL+ + PE E+ L+ + P
Sbjct: 209 ARRARLLRDPDKPRILAVGRLD-------PRKGIDTLIRAYAELPELRERANLVIVGGPR 261
Query: 787 RTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIY-GCISQDELASFYRDAAVALVTP 845
+ ++ E+ + +G I+ R + G +S+++L + YR A V +
Sbjct: 262 DDILAMDEEELRELARELGVID-----------RVDFPGRVSREDLPALYRAADVFVNPA 310
Query: 846 LRDGMNLVAKEFVAC 860
L + L A E +AC
Sbjct: 311 LYEPFGLTALEAMAC 325
>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the
GT1 family of glycosyltransferases. wlbH in Bordetella
parapertussis has been shown to be required for the
biosynthesis of a trisaccharide that, when attached to
the B. pertussis lipopolysaccharide (LPS) core (band B),
generates band A LPS.
Length = 377
Score = 40.8 bits (96), Expect = 0.004
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 33/225 (14%)
Query: 301 KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRV--IDTKQKIVLGVDRLDYTKGLVH 358
+ L G ++ +P + ERF +A R + +K++L V RL KG+ +
Sbjct: 160 ADELKALGIDPEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDY 219
Query: 359 RLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 418
++A LL+K P+ V L+ I D + L+ +L + R T
Sbjct: 220 LIEALARLLKKRPD----VHLV-IV----GDGPLREALEALAAEL--GLEDRVT------ 262
Query: 419 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGVLIVSPFAGAG 478
G + +E+ ++Y A V ++ LR+G LV E +AC + P ++ + G
Sbjct: 263 ---FLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL--P---VVATDVGGIP 314
Query: 479 EQMHEA---LICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRKR 520
E + + L+ P + +A AE I R L D R+R
Sbjct: 315 EIITDGENGLLVPPGDPEALAEAILRLL---ADPWLRLGRAARRR 356
Score = 38.9 bits (91), Expect = 0.016
Identities = 46/218 (21%), Positives = 82/218 (37%), Gaps = 30/218 (13%)
Query: 647 RRLGCRVDRKNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRVI----DTKQKIVLGV 702
L ++ ++ HG + + R L +A VI ++
Sbjct: 110 ALLKRKLGIPLVVTLHGSDVNLLPRKRLLRALLRRA-LRRAD-AVIAVSEALADELK--- 164
Query: 703 DRLDYTKGLIESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHRLKA 762
L + I N + A+A + +K++L V RL KG+ + ++A
Sbjct: 165 -ALGIDPEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEA 223
Query: 763 FETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYI 822
LL+K P+ V L+ I D + L+ +L + R T
Sbjct: 224 LARLLKKRPD----VHLV-IV----GDGPLREALEALAAEL--GLEDRVT---------F 263
Query: 823 YGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 860
G + +E+ ++Y A V ++ LR+G LV E +AC
Sbjct: 264 LGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMAC 301
>gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate
glycosyltransferase. Members of this protein family,
found exclusively in the Actinobacteria, are MshA, the
glycosyltransferase of mycothiol biosynthesis. Mycothiol
replaces glutathione in these species.
Length = 405
Score = 39.0 bits (91), Expect = 0.019
Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 23/164 (14%)
Query: 304 LVEH-GGRTVRIRPLPIAIPYERFVQLAQAAPRV---IDTKQKIVLGVDRLDYTKGLVHR 359
LV H RI + ERF +A R + K+V V R+ K
Sbjct: 178 LVRHYDADPDRIDVVAPGADLERFRPGDRATERARLGLPLDTKVVAFVGRIQPLKAPDVL 237
Query: 360 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKE---YQDLKEEMDQLVGRINGRFTTPNW 416
L+A LL++ P+ + ++ + PS + + +L E+ + R+ RF P
Sbjct: 238 LRAVAELLDRDPD--RNLRVIVVGGPSGSGLATPDALIELAAELG-IADRV--RFLPPR- 291
Query: 417 SPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVAC 460
+EL YR A V V + LVA E AC
Sbjct: 292 ----------PPEELVHVYRAADVVAVPSYNESFGLVAMEAQAC 325
Score = 35.9 bits (83), Expect = 0.14
Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 36/190 (18%)
Query: 690 RVIDTKQKIVLGVDRL-----DYTKGLIE---SIRNSIAIPY-----ERFVQLAQAAPRV 736
R I +Q++V DRL + + L+ + + I + ERF +A R
Sbjct: 153 RRI-GEQQLVDNADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRATERA 211
Query: 737 ---IDTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKE- 792
+ K+V V R+ K L+A LL++ P+ + ++ + PS + +
Sbjct: 212 RLGLPLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPD--RNLRVIVVGGPSGSGLATP 269
Query: 793 --YQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGM 850
+L E+ + R+ RF P +EL YR A V V +
Sbjct: 270 DALIELAAELG-IADRV--RFLPPR-----------PPEELVHVYRAADVVAVPSYNESF 315
Query: 851 NLVAKEFVAC 860
LVA E AC
Sbjct: 316 GLVAMEAQAC 325
>gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of
haloacid dehalogenase superfamily. This subfamily of
sequences falls within the Class-IIB subfamily
(TIGR01484) of the Haloacid Dehalogenase superfamily of
aspartate-nucleophile hydrolases. The use of the name
"Cof" as an identifier here is arbitrary and refers to
the E. coli Cof protein. This subfamily is notable for
the large number of recent paralogs in many species.
Listeria, for instance, has 12, Clostridium, Lactococcus
and Streptococcus pneumoniae have 8 each, Enterococcus
and Salmonella have 7 each, and Bacillus subtilus,
Mycoplasma, Staphylococcus and E. coli have 6 each. This
high degree of gene duplication is limited to the gamma
proteobacteria and low-GC gram positive lineages. The
profusion of genes in this subfamily is not coupled with
a high degree of divergence, so it is impossible to
determine an accurate phylogeny at the equivalog level.
Considering the relationship of this subfamily to the
other known members of the HAD-IIB subfamily
(TIGR01484), sucrose and trehalose phosphatases and
phosphomannomutase, it seems a reasonable hypothesis
that these enzymes act on phosphorylated sugars.
Possibly the diversification of genes in this subfamily
represents the diverse sugars and polysaccharides that
various bacteria find in their biological niches. The
members of this subfamily are restricted almost
exclusively to bacteria (one sequences from S. pombe
scores above trusted, while another is between trusted
and noise). It is notable that no archaea are found in
this group, the closest relations to the archaea found
here being two Deinococcus sequences [Unknown function,
Enzymes of unknown specificity].
Length = 256
Score = 36.9 bits (86), Expect = 0.048
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 43 LDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGR---NVHNVMEMVGIEG 99
+D DGTL + D + P TK L KL + + + +GR V N+++ +G++
Sbjct: 4 IDLDGTLL----NDDHTISPS-TKEALAKLREK-GIKVVLATGRPYKEVKNILKELGLDT 57
Query: 100 LTYAGNHGLEIIHPDGS-RFVHPIPTEFEDKVSDLLKTLQEKVMSVHID 147
N +I G + P+ D V ++L L++ + V +
Sbjct: 58 PFITANGAA-VIDDQGEILYKKPLDL---DLVEEILNFLKKHGLDVILY 102
>gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family.
A conserved gene cluster found sporadically from
Actinobacteria to Proteobacteria to Cyanobacteria
features a radical SAM protein, an N-acetyltransferase,
an oxidoreductase, and two additional proteins whose
functional classes are unclear. The metabolic role of
the cluster is probably biosynthetic. This
glycosyltransferase, named from member MSMEG_0565 from
Mycobacterium smegmatis, occurs in most but not all
instances of the cluster [Unknown function, Enzymes of
unknown specificity].
Length = 373
Score = 37.4 bits (87), Expect = 0.057
Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 26/176 (14%)
Query: 343 IVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQ 402
VL V ++ K + L+AF L + P+ Q+ + + +Y + E +
Sbjct: 195 YVLAVGGIEPRKNTIDLLEAFALLRARRPQ-------AQLVIAGGATLFDYDAYRREFEA 247
Query: 403 LV---GRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVA 459
G G I G + +L + YR A L++G LV E +A
Sbjct: 248 RAAELGLDPGAVV---------ITGPVPDADLPALYRCADAFAFPSLKEGFGLVVLEALA 298
Query: 460 CQINEPPGVLIVSPFAGAGEQM--HEALICNPYEIDAAAEVIHRALTMPEDERTLR 513
I P ++ S A E + +A +P + D+ A+ + AL L
Sbjct: 299 SGI--P---VVASDIAPFTEYLGRFDAAWADPSDPDSIADALALALDPARRPALLA 349
Score = 34.3 bits (79), Expect = 0.44
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 19/123 (15%)
Query: 743 IVLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQ 802
VL V ++ K + L+AF L + P+ Q+ + + +Y + E +
Sbjct: 195 YVLAVGGIEPRKNTIDLLEAFALLRARRPQ-------AQLVIAGGATLFDYDAYRREFEA 247
Query: 803 LV---GRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVA 859
G G I G + +L + YR A L++G LV E +A
Sbjct: 248 RAAELGLDPGAVV---------ITGPVPDADLPALYRCADAFAFPSLKEGFGLVVLEALA 298
Query: 860 CQI 862
I
Sbjct: 299 SGI 301
>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases
catalyze the transfer of sugar moieties from activated
donor molecules to specific acceptor molecules, forming
glycosidic bonds. The acceptor molecule can be a lipid,
a protein, a heterocyclic compound, or another
carbohydrate residue. The structures of the formed
glycoconjugates are extremely diverse, reflecting a wide
range of biological functions. The members of this
family share a common GTB topology, one of the two
protein topologies observed for
nucleotide-sugar-dependent glycosyltransferases. GTB
proteins have distinct N- and C- terminal domains each
containing a typical Rossmann fold. The two domains have
high structural homology despite minimal sequence
homology. The large cleft that separates the two domains
includes the catalytic center and permits a high degree
of flexibility.
Length = 229
Score = 34.9 bits (80), Expect = 0.23
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 26/133 (19%)
Query: 349 RLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRIN 408
RL KGL ++AF L E+ P + L+ D E + L+E + L+
Sbjct: 112 RLAPEKGLDDLIEAFALLKERGP----DLKLVIAG-----DGPEREYLEELLAALLLLDR 162
Query: 409 GRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGV 468
F G ++ LA A V ++ LR+G LV E +AC G+
Sbjct: 163 VIFLG----------GLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC------GL 206
Query: 469 LIVS-PFAGAGEQ 480
+++ G E
Sbjct: 207 PVIATDVGGPPEI 219
Score = 34.9 bits (80), Expect = 0.23
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 26/133 (19%)
Query: 749 RLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRIN 808
RL KGL ++AF L E+ P + L+ D E + L+E + L+
Sbjct: 112 RLAPEKGLDDLIEAFALLKERGP----DLKLVIAG-----DGPEREYLEELLAALLLLDR 162
Query: 809 GRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQINEPPGV 868
F G ++ LA A V ++ LR+G LV E +AC G+
Sbjct: 163 VIFLG----------GLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC------GL 206
Query: 869 LIVS-PFAGAGEQ 880
+++ G E
Sbjct: 207 PVIATDVGGPPEI 219
>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases. The
haloacid dehalogenase-like (HAD) superfamily includes
L-2-haloacid dehalogenase, epoxide hydrolase,
phosphoserine phosphatase, phosphomannomutase,
phosphoglycolate phosphatase, P-type ATPase, and many
others, all of which use a nucleophilic aspartate in
their phosphoryl transfer reaction. All members possess
a highly conserved alpha/beta core domain, and many also
possess a small cap domain, the fold and function of
which is variable. Members of this superfamily are
sometimes referred to as belonging to the DDDD
superfamily of phosphohydrolases.
Length = 139
Score = 33.5 bits (77), Expect = 0.32
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 13/113 (11%)
Query: 40 ALLLDYDGTL---APIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96
A+L D DGTL P + L K L++L + +++ + ++ V+E++
Sbjct: 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLE 59
Query: 97 IEGLTYAGNH-----GLEIIHPDGSRFVHPIPTEF----EDKVSDLLKTLQEK 140
GL + G I +P F+ P + DK+ LK L
Sbjct: 60 ELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVD 112
Score = 32.7 bits (75), Expect = 0.57
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 1397 ALLLDYDGTL---APIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453
A+L D DGTL P + L K L++L + +++ + ++ V+E++
Sbjct: 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLE 59
Query: 1454 IEGL 1457
GL
Sbjct: 60 ELGL 63
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase,
subunit 1. This model represents the enzyme (also
called D-alanine-D-alanyl carrier protein ligase) which
activates D-alanine as an adenylate via the reaction
D-ala + ATP -> D-ala-AMP + PPi, and further catalyzes
the condensation of the amino acid adenylate with the
D-alanyl carrier protein (D-ala-ACP). The D-alanine is
then further transferred to teichoic acid in the
biosynthesis of lipoteichoic acid (LTA) and wall
teichoic acid (WTA) in gram positive bacteria, both
polysacchatides [Cell envelope, Biosynthesis and
degradation of murein sacculus and peptidoglycan].
Length = 502
Score = 35.1 bits (81), Expect = 0.33
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 360 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419
++A + E +P+ IA + YQ LKE+ D+L I R P SPI
Sbjct: 3 IEAIQAFAETYPQT--------IAYRYQGQELTYQQLKEQSDRLAAFIQKR-ILPKKSPI 53
Query: 420 RYIYGCISQDELASF 434
+YG + L +F
Sbjct: 54 -IVYGHMEPHMLVAF 67
Score = 35.1 bits (81), Expect = 0.33
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 760 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819
++A + E +P+ IA + YQ LKE+ D+L I R P SPI
Sbjct: 3 IEAIQAFAETYPQT--------IAYRYQGQELTYQQLKEQSDRLAAFIQKR-ILPKKSPI 53
Query: 820 RYIYGCISQDELASF 834
+YG + L +F
Sbjct: 54 -IVYGHMEPHMLVAF 67
>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the
GT1 family of glycosyltransferases. AmSD in Erwinia
amylovora has been shown to be involved in the
biosynthesis of amylovoran, the acidic exopolysaccharide
acting as a virulence factor. This enzyme may be
responsible for the formation of galactose alpha-1,6
linkages in amylovoran.
Length = 348
Score = 34.5 bits (80), Expect = 0.43
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 12/73 (16%)
Query: 703 DRLDYTKGL---IESIRNSIAIPYERFVQLAQAAPRVIDTKQKIVLGVDRLDYTKGLVHR 759
DR Y K + I N + P E D K K +L V RL KG
Sbjct: 146 DRALYYKKFNKNVVVIPNPLPFPPE---------EPSSDLKSKRILAVGRLVPQKGFDLL 196
Query: 760 LKAFETLLEKHPE 772
++A+ + +KHP+
Sbjct: 197 IEAWAKIAKKHPD 209
Score = 34.1 bits (79), Expect = 0.56
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 338 DTKQKIVLGVDRLDYTKGLVHRLKAFETLLEKHPE 372
D K K +L V RL KG ++A+ + +KHP+
Sbjct: 175 DLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPD 209
>gnl|CDD|234361 TIGR03812, tyr_de_CO2_Arch, tyrosine decarboxylase MnfA. Members
of this protein family are the archaeal form, MnfA, of
tyrosine decarboxylase, and are involved in methanofuran
biosynthesis. Members show clear homology to the
Enterococcus form, Tdc, that is involved in tyrosine
decarboxylation for resistance to acidic conditions
[Biosynthesis of cofactors, prosthetic groups, and
carriers, Other].
Length = 373
Score = 33.1 bits (76), Expect = 1.1
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 55 HPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPD 114
P + EE +L L +LPD + I+SG N+ + + L II P+
Sbjct: 54 FPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPE 113
Query: 115 GSRFVHPIPTEFEDKVSDLL 134
+ F F +K +++L
Sbjct: 114 SAHF------SF-EKAAEML 126
>gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales
peptide system. Members of this protein family are
predicted glycosyltransferases that occur in conserved
gene neighborhoods in various members of the
Bacteroidales. These neighborhoods feature a radical SAM
enzyme predicted to act in peptide modification (family
TIGR04148), peptides from family TIGR04149 with a
characteristic GG cleavage motif, and several other
proteins.
Length = 406
Score = 33.0 bits (76), Expect = 1.2
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 342 KIVLGVDRLDYTKGLVHRLKAFETLLEKHPE-HL 374
KI+L V RLD KG+ + ++AF+ +L+K P L
Sbjct: 228 KIILFVGRLDEIKGVDYLIEAFKIVLKKDPNCRL 261
Score = 33.0 bits (76), Expect = 1.2
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 742 KIVLGVDRLDYTKGLVHRLKAFETLLEKHPE-HL 774
KI+L V RLD KG+ + ++AF+ +L+K P L
Sbjct: 228 KIILFVGRLDEIKGVDYLIEAFKIVLKKDPNCRL 261
>gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase.
Length = 866
Score = 33.1 bits (76), Expect = 1.4
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 21/67 (31%)
Query: 5 DEYLSKNELFILKGMGTLEDFDEYLSKYIGTTNKLA---------LLLDYDGTLAPIA-- 53
E L KN LFIL D + L Y+ N + L L DGTL P+A
Sbjct: 420 QEALEKNRLFIL-------DHHDALMPYLRRINSTSTKTYATRTLLFLKDDGTLKPLAIE 472
Query: 54 ---PHPD 57
PHP
Sbjct: 473 LSLPHPQ 479
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit
1; Provisional.
Length = 503
Score = 32.6 bits (75), Expect = 1.6
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 10/75 (13%)
Query: 360 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 419
++ E + P+ A + Y LKE+ D L I+ P+ SPI
Sbjct: 5 IETIEEFAQTQPD--------FPAYDYLGEKLTYGQLKEDSDALAAFIDSL-KLPDKSPI 55
Query: 420 RYIYGCISQDELASF 434
++G +S + LA+F
Sbjct: 56 -IVFGHMSPEMLATF 69
Score = 32.6 bits (75), Expect = 1.6
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 10/75 (13%)
Query: 760 LKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 819
++ E + P+ A + Y LKE+ D L I+ P+ SPI
Sbjct: 5 IETIEEFAQTQPD--------FPAYDYLGEKLTYGQLKEDSDALAAFIDSL-KLPDKSPI 55
Query: 820 RYIYGCISQDELASF 834
++G +S + LA+F
Sbjct: 56 -IVFGHMSPEMLATF 69
>gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to
the GT1 family of glycosyltransferases. ORF704 in E.
coli has been shown to be involved in the biosynthesis
of O-specific mannose homopolysaccharides.
Length = 366
Score = 31.8 bits (73), Expect = 2.9
Identities = 58/236 (24%), Positives = 84/236 (35%), Gaps = 46/236 (19%)
Query: 291 QRRLGCRVDR-----KNLLVEHGGR--TVRIRPLPIAIPYERFVQLAQAAPRVIDTKQKI 343
R L R D LL R +I +P +P + +
Sbjct: 128 LRLLLRRADAVIVMSSELLRALLLRAYPEKIAVIPHGVPDPPAEPPESLKALGGLDGRPV 187
Query: 344 VLGVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQL 403
+L L KGL L+A L+ KHP+ V LL +A + D++ Y+ + +
Sbjct: 188 LLTFGLLRPYKGLELLLEALPLLVAKHPD----VRLL-VAGETHPDLERYRGEAYALAER 242
Query: 404 VGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAKEFVACQIN 463
+G + R N RY + +EL + A V +V P R A Q
Sbjct: 243 LG-LADRVIFIN----RY----LPDEELPELFSAADV-VVLPYRS----------ADQTQ 282
Query: 464 EPPGVL----------IVSPFAGAGEQMHEA--LICNPYEIDAAAEVIHRALTMPE 507
GVL I +P A E + L+ P + A AE I R L PE
Sbjct: 283 S--GVLAYAIGFGKPVISTPVGHAEEVLDGGTGLLVPPGDPAALAEAIRRLLADPE 336
>gnl|CDD|130598 TIGR01535, glucan_glucosid, glucan 1,4-alpha-glucosidase. Glucan
1,4-alpha-glucosidase catalyzes the hydrolysis of
terminal 1,4-linked alpha-D-glucose residues from
non-reducing ends of polysaccharides, releasing a
beta-D-glucose monomer. Some forms of this enzyme can
hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds
in polysaccharides as well [Energy metabolism,
Biosynthesis and degradation of polysaccharides].
Length = 648
Score = 31.7 bits (72), Expect = 3.6
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Query: 155 YNGCCNGTFWPLFHSMPDRAMF---CAEHWRAYAQVNQEFA-----------DKTIKALQ 200
Y+G G WPL +R + + Y + ++FA D+T +
Sbjct: 547 YDGTGKGRLWPLLTG--ERGHYELAAGKDATPYLKAMEKFANEGGMIPEQVWDQTDLPSR 604
Query: 201 ILAQEEPADSGTPLVWIHDYHLMLAANTI 229
L P DS +PL W H ++ L + I
Sbjct: 605 GLFYGLPTDSASPLNWAHAEYVKLLRSNI 633
>gnl|CDD|223779 COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine
transferase [Cell envelope biogenesis, outer membrane].
Length = 357
Score = 31.5 bits (72), Expect = 3.8
Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 27/109 (24%)
Query: 419 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAK---------------EFVACQIN 463
+ + G +EL S Y + V V P D M + E +A +
Sbjct: 215 VIHQTGKNDLEELKSAYNELGVVRVLPFIDDMAALLAAADLVISRAGALTIAELLALGV- 273
Query: 464 EPPGVLIVSPFAGAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTL 512
P +L+ P G Q + A E A A AL + + E T
Sbjct: 274 --PAILVPYPPGADGHQEYNA---KFLE-KAGA-----ALVIRQSELTP 311
Score = 30.0 bits (68), Expect = 8.8
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 18/82 (21%)
Query: 819 IRYIYGCISQDELASFYRDAAVALVTPLRDGMNLVAK---------------EFVACQIN 863
+ + G +EL S Y + V V P D M + E +A +
Sbjct: 215 VIHQTGKNDLEELKSAYNELGVVRVLPFIDDMAALLAAADLVISRAGALTIAELLALGV- 273
Query: 864 EPPGVLIVSPFAGAGEQMHEAL 885
P +L+ P G Q + A
Sbjct: 274 --PAILVPYPPGADGHQEYNAK 293
>gnl|CDD|236461 PRK09302, PRK09302, circadian clock protein KaiC; Reviewed.
Length = 509
Score = 31.4 bits (72), Expect = 4.1
Identities = 43/167 (25%), Positives = 58/167 (34%), Gaps = 56/167 (33%)
Query: 1132 VDRKNLLVEHGGRTVRIRPLPIAIPYER-----FVQLAQA-----APRV-IDTKQKIVLG 1180
+D L + P E F+++ A A RV +D+ + + G
Sbjct: 90 IDEGKLFILD----ASPDPSEQEEAGEYDLEALFIRIEYAIDKIGAKRVVLDSIEALFSG 145
Query: 1181 VDRLDYTKGLVHRNELFIL------KGMGTLIT-EDGDDVLPTTMQPVTLEDFDEYLSKN 1233
V R EL L KG+ +IT E GD+ P T V +E++S
Sbjct: 146 FSNEA-----VVRRELRRLFAWLKQKGVTAVITGERGDEYGPLTRYGV-----EEFVSDC 195
Query: 1234 ---------------ELFILKGMGT---------LITEDGDDVLPTT 1256
L ILK GT ITEDG VLP T
Sbjct: 196 VIILRNRLEGEKRTRTLRILKYRGTTHGKNEYPFTITEDGISVLPLT 242
>gnl|CDD|202042 pfam01912, eIF-6, eIF-6 family. This family includes eukaryotic
translation initiation factor 6 as well as presumed
archaebacterial homologues.
Length = 197
Score = 30.6 bits (70), Expect = 4.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 382 IAVPSRTDVKEYQDLKEEMDQLVGRINGRFT 412
+ VPS +E LKE +D V R+ + T
Sbjct: 65 LLVPSTATDEELDHLKESLDVNVERLEEKLT 95
Score = 30.6 bits (70), Expect = 4.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 782 IAVPSRTDVKEYQDLKEEMDQLVGRINGRFT 812
+ VPS +E LKE +D V R+ + T
Sbjct: 65 LLVPSTATDEELDHLKESLDVNVERLEEKLT 95
>gnl|CDD|100052 cd04646, LbH_Dynactin_6, Dynactin 6 (or subunit p27): Dynactin is a
major component of the activator complex that stimulates
dynein-mediated vesicle transport. Dynactin is a
heterocomplex of at least eight subunits, including a
150,000-MW protein called Glued, the actin-capping
protein Arp1, and dynamatin. In vitro binding
experiments show that dynactin enhances dynein-dependent
motility, possibly through interaction with microtubules
and vesicles. Subunit p27 is part of the pointed-end
subcomplex in dynactin that also includes p25, p26, and
Arp11. This subcomplex interacts with membranous
cargoes. p25 and p27 contain the imperfect tandem
repeats of a hexapeptide repeat motif
(X-[STAV]-X-[LIV]-[GAED]-X), indicating a left-handed
parallel beta helix (LbH) structural domain. Proteins
containing hexapeptide repeats are often enzymes showing
acyltransferase activity.
Length = 164
Score = 30.0 bits (68), Expect = 5.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 476 GAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 519
GAG ++ + I + A+ + R T +TL++++LRK
Sbjct: 111 GAGCKLPSSEILPENTVIYGADCLRRTQTDRPKPQTLQLDFLRK 154
Score = 30.0 bits (68), Expect = 5.3
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 932 GAGEQMHEALICNPYEIDAAAEVIHRALTMPEDERTLRMNYLRK 975
GAG ++ + I + A+ + R T +TL++++LRK
Sbjct: 111 GAGCKLPSSEILPENTVIYGADCLRRTQTDRPKPQTLQLDFLRK 154
>gnl|CDD|240305 PTZ00174, PTZ00174, phosphomannomutase; Provisional.
Length = 247
Score = 30.7 bits (70), Expect = 5.4
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 37 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 96
K LL D DGTL + +E K TL KL + I ++ G + + E +G
Sbjct: 4 KKTILLFDVDGTLT-----KPRNPITQEMKDTLAKLKSK-GFKIGVVGGSDYPKIKEQLG 57
Score = 30.7 bits (70), Expect = 5.4
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 1394 NKLALLLDYDGTLAPIAPHPDMAVLPEETKRTLQKLANLPDVHISIISGRNVHNVMEMVG 1453
K LL D DGTL + +E K TL KL + I ++ G + + E +G
Sbjct: 4 KKTILLFDVDGTLT-----KPRNPITQEMKDTLAKLKSK-GFKIGVVGGSDYPKIKEQLG 57
>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the
GT1 family of glycosyltransferases.
UDP-glucose-diacylglycerol glucosyltransferase (UGDG;
also known as 1,2-diacylglycerol 3-glucosyltransferase)
catalyzes the transfer of glucose from UDP-glucose to
1,2-diacylglycerol forming
3-D-glucosyl-1,2-diacylglycerol.
Length = 374
Score = 30.3 bits (69), Expect = 7.4
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 656 KNLLVEHGGRTVRIRPLPIAIPYERFVQLAQAAPRV---IDTKQKIVLGVDRLDYTKGLI 712
+LL E+G I +P I +RF + R I + ++L V RL K +
Sbjct: 160 ADLLREYGV-KRPIEVIPTGIDLDRFEPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNID 218
Query: 713 ESIR 716
IR
Sbjct: 219 FLIR 222
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.323 0.141 0.431
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 78,578,317
Number of extensions: 8253004
Number of successful extensions: 7827
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7669
Number of HSP's successfully gapped: 146
Length of query: 1460
Length of database: 10,937,602
Length adjustment: 109
Effective length of query: 1351
Effective length of database: 6,103,016
Effective search space: 8245174616
Effective search space used: 8245174616
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (28.7 bits)