Query psy7757
Match_columns 143
No_of_seqs 47 out of 49
Neff 2.4
Searched_HMMs 46136
Date Fri Aug 16 18:02:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7757.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7757hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF12872 OST-HTH: OST-HTH/LOTU 98.9 1.4E-09 3E-14 71.0 3.2 66 73-139 3-70 (74)
2 COG3760 Uncharacterized conser 31.9 35 0.00075 28.1 2.0 43 99-142 71-113 (164)
3 cd06652 STKc_MEKK2 Catalytic d 30.2 35 0.00075 25.4 1.6 50 71-120 106-156 (265)
4 PF08321 PPP5: PPP5 TPR repeat 29.3 1.2E+02 0.0026 22.0 4.3 45 71-132 51-95 (95)
5 PF04262 Glu_cys_ligase: Gluta 25.7 26 0.00056 31.5 0.3 38 83-120 195-241 (377)
6 KOG0197|consensus 25.2 20 0.00044 33.1 -0.4 46 66-119 298-352 (468)
7 PF06692 MNSV_P7B: Melon necro 25.0 20 0.00043 25.3 -0.4 16 99-114 37-52 (61)
8 PF10678 DUF2492: Protein of u 25.0 71 0.0015 23.1 2.4 53 77-132 6-65 (78)
9 PF08158 NUC130_3NT: NUC130/3N 23.5 85 0.0018 20.8 2.4 24 66-89 6-29 (52)
10 PF02671 PAH: Paired amphipath 23.3 12 0.00025 23.1 -1.7 24 76-99 24-47 (47)
11 KOG1179|consensus 22.6 64 0.0014 31.4 2.3 18 73-90 334-351 (649)
12 PF00667 FAD_binding_1: FAD bi 22.4 28 0.00061 27.3 -0.1 23 78-100 151-173 (219)
13 cd06651 STKc_MEKK3 Catalytic d 22.1 63 0.0014 24.1 1.8 50 71-120 106-156 (266)
14 cd05056 PTKc_FAK Catalytic dom 21.4 60 0.0013 24.2 1.5 52 69-120 105-157 (270)
15 COG2514 Predicted ring-cleavag 21.0 30 0.00065 30.0 -0.2 34 72-108 181-216 (265)
No 1
>PF12872 OST-HTH: OST-HTH/LOTUS domain; PDB: 2KPM_A 3S93_B 3RCO_A 2KZV_A.
Probab=98.88 E-value=1.4e-09 Score=71.04 Aligned_cols=66 Identities=24% Similarity=0.398 Sum_probs=54.2
Q ss_pred hHhHHHHHHHHhhhCCC--cccccCcccchhhhhccccccccccchhhHHHHHhhccceeeeecccccc
Q psy7757 73 MSLLCRELVDLLKTFPH--CQMVFNKFIPAYHHHFGRQCRVADYGFTKLIDLLEAIPHVVQVIMDFLRS 139 (143)
Q Consensus 73 l~qFarEvVdLLk~~p~--c~m~F~kFipaYHhHFGrQCRvsdYGftKL~dLleaIp~vVqIlg~~~~~ 139 (143)
+..+.+++.++|...+. ..++.+.|-..|..+| ..+...+|||++|.|||+++|++++|...+..+
T Consensus 3 ~~~~~~~l~~ll~~~~~~~g~v~ls~l~~~~~~~~-~~f~~~~yG~~~l~~ll~~~~~~~~i~~~~~g~ 70 (74)
T PF12872_consen 3 LEELKKLLRELLESQKGEDGWVSLSQLGQEYKKKY-PDFDPRDYGFSSLSELLESLPDVVEIEERQHGG 70 (74)
T ss_dssp -HHHHHHHHHHHHHTCTTTSSEEHHHHHHHHHHHH-TT--TCCTTSSSHHHHHHT-TTTEEEEEEECCC
T ss_pred HHHHHHHHHHHHHhCcCCCceEEHHHHHHHHHHHC-CCCCccccCCCcHHHHHHhCCCeEEEeeeCCCC
Confidence 45788899999966665 3899999999999999 999999999999999999999999996554433
No 2
>COG3760 Uncharacterized conserved protein [Function unknown]
Probab=31.93 E-value=35 Score=28.08 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=35.2
Q ss_pred chhhhhccccccccccchhhHHHHHhhccceeeeeccccccccC
Q psy7757 99 PAYHHHFGRQCRVADYGFTKLIDLLEAIPHVVQVIMDFLRSQRD 142 (143)
Q Consensus 99 paYHhHFGrQCRvsdYGftKL~dLleaIp~vVqIlg~~~~~~~~ 142 (143)
++.|.--|-. |+|+=.=.||.|+|.-+|+.|.+.|--..-+++
T Consensus 71 k~ih~~IG~~-RlsFg~~E~l~E~LGv~pG~VT~Fglindt~~r 113 (164)
T COG3760 71 KSIHETIGAA-RLSFGSPERLMEYLGVIPGSVTVFGLINDTENR 113 (164)
T ss_pred HHHHHHhcee-eeecCCHHHHHHHhCCCcCceeEeeeecCccce
Confidence 5678878887 999777889999999999999998865555544
No 3
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=30.23 E-value=35 Score=25.40 Aligned_cols=50 Identities=12% Similarity=0.171 Sum_probs=33.7
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch-hhhhccccccccccchhhHH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA-YHHHFGRQCRVADYGFTKLI 120 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa-YHhHFGrQCRvsdYGftKL~ 120 (143)
....+++.++.+-|.....+.+.-.++-|+ -.---.-+++++|||+.+..
T Consensus 106 ~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 106 NVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 455688999998888777766555554444 22223457999999987754
No 4
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=29.33 E-value=1.2e+02 Score=22.04 Aligned_cols=45 Identities=16% Similarity=0.318 Sum_probs=30.5
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccchhhhhccccccccccchhhHHHHHhhccceeee
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPAYHHHFGRQCRVADYGFTKLIDLLEAIPHVVQV 132 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipaYHhHFGrQCRvsdYGftKL~dLleaIp~vVqI 132 (143)
+-+..|...+++.+|.+ -.-|.+|..|- ..+..++|.+.|.+|.|
T Consensus 51 ~it~efv~~mie~FK~~-----------K~Lhkkyv~~I------l~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 51 PITLEFVKAMIEWFKNQ-----------KKLHKKYVYQI------LLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp B--HHHHHHHHHHHHCT---------------HHHHHHH------HHHHHHHHHTS-SEEEE
T ss_pred CCCHHHHHHHHHHHHhC-----------CCccHHHHHHH------HHHHHHHHHhCcCccCC
Confidence 46679999999999987 44577666553 34567899999999876
No 5
>PF04262 Glu_cys_ligase: Glutamate-cysteine ligase ; InterPro: IPR007370 This is a group of bacterial glutamate-cysteine ligases that carry out the first step of the glutathione biosynthesis pathway according to the following equation: ATP + L-glutamate + L-cysteine = ADP + phosphate + L-glutamyl-L-cysteine (L-aminohexanoate can replace glutamate). ; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process; PDB: 3LN6_A 3LN7_B 1VA6_B 2D33_B 1V4G_B 2D32_A 3NZT_A.
Probab=25.70 E-value=26 Score=31.50 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=22.2
Q ss_pred HhhhCCCcccccCccc---------chhhhhccccccccccchhhHH
Q psy7757 83 LLKTFPHCQMVFNKFI---------PAYHHHFGRQCRVADYGFTKLI 120 (143)
Q Consensus 83 LLk~~p~c~m~F~kFi---------paYHhHFGrQCRvsdYGftKL~ 120 (143)
|+=-.|-++-.|.+=. .++..++++-.|+|||||+...
T Consensus 195 LfGASP~~~~sf~~~~~~~l~~~~~~t~~~~~~~SLR~S~~GY~N~~ 241 (377)
T PF04262_consen 195 LFGASPAAEKSFFKGKPHELEKLGDGTLYLPYATSLRMSDYGYTNKA 241 (377)
T ss_dssp HC--BSEEEGGGTST--TTSEETTSSEEETTT-SBGCCSSSSS-SHC
T ss_pred HhcCChhhhhccccCCcchhhccCCCCcCCCCeeeeeccccCCCCCc
Confidence 3344555555554332 3466778999999999998653
No 6
>KOG0197|consensus
Probab=25.20 E-value=20 Score=33.11 Aligned_cols=46 Identities=11% Similarity=0.290 Sum_probs=28.4
Q ss_pred CcccchhhHhHHHHHHHHhhhCCCcccccCcccchhhhhc---------cccccccccchhhH
Q psy7757 66 SPSLQGQMSLLCRELVDLLKTFPHCQMVFNKFIPAYHHHF---------GRQCRVADYGFTKL 119 (143)
Q Consensus 66 sp~~~~~l~qFarEvVdLLk~~p~c~m~F~kFipaYHhHF---------GrQCRvsdYGftKL 119 (143)
..-..++|..||.++++=....-. ++| -|+=. ..+|++||||.+|+
T Consensus 298 ~~l~~~~Ll~~a~qIaeGM~YLes-----~~~---IHRDLAARNiLV~~~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 298 GLLNLPQLLDFAAQIAEGMAYLES-----KNY---IHRDLAARNILVDEDLVVKISDFGLARL 352 (468)
T ss_pred CccchHHHHHHHHHHHHHHHHHHh-----CCc---cchhhhhhheeeccCceEEEcccccccc
Confidence 344557889999988864433210 011 23322 24899999999994
No 7
>PF06692 MNSV_P7B: Melon necrotic spot virus P7B protein; InterPro: IPR009575 This family consists of several Melon necrotic spot virus (MNSV) P7B proteins. The function of this family is unknown.
Probab=24.98 E-value=20 Score=25.33 Aligned_cols=16 Identities=31% Similarity=0.642 Sum_probs=11.1
Q ss_pred chhhhhcccccccccc
Q psy7757 99 PAYHHHFGRQCRVADY 114 (143)
Q Consensus 99 paYHhHFGrQCRvsdY 114 (143)
|.|||||.--.-=.+|
T Consensus 37 ~~y~HH~d~Ss~KTQy 52 (61)
T PF06692_consen 37 NTYVHHFDNSSVKTQY 52 (61)
T ss_pred CeeEEeecCccceeEE
Confidence 8899999765444434
No 8
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=24.98 E-value=71 Score=23.10 Aligned_cols=53 Identities=19% Similarity=0.369 Sum_probs=40.2
Q ss_pred HHHHHHHh--hhCCCcccccCcccchhhhhcccc-----ccccccchhhHHHHHhhccceeee
Q psy7757 77 CRELVDLL--KTFPHCQMVFNKFIPAYHHHFGRQ-----CRVADYGFTKLIDLLEAIPHVVQV 132 (143)
Q Consensus 77 arEvVdLL--k~~p~c~m~F~kFipaYHhHFGrQ-----CRvsdYGftKL~dLleaIp~vVqI 132 (143)
+.||..++ +..|+ .=..++.+-+-+||.+ |...++....|++.|++=.-+...
T Consensus 6 gHeVL~mmi~~~~~~---t~~~L~~ai~~~FG~~arFhTCSae~m~a~eLv~FL~~rgKfi~~ 65 (78)
T PF10678_consen 6 GHEVLNMMIESGNPY---TKEELKAAIIEKFGEDARFHTCSAEGMTADELVDFLEERGKFIPS 65 (78)
T ss_pred HHHHHHHHHHcCCCc---CHHHHHHHHHHHhCCCceEEecCCCCCCHHHHHHHHHHcCCEeec
Confidence 56888888 66655 3445667788899965 667888999999999987766654
No 9
>PF08158 NUC130_3NT: NUC130/3NT domain; InterPro: IPR012977 This N-terminal domain is found in a novel nucleolar protein family defined by NUC130/133 [].
Probab=23.48 E-value=85 Score=20.82 Aligned_cols=24 Identities=21% Similarity=0.300 Sum_probs=18.0
Q ss_pred CcccchhhHhHHHHHHHHhhhCCC
Q psy7757 66 SPSLQGQMSLLCRELVDLLKTFPH 89 (143)
Q Consensus 66 sp~~~~~l~qFarEvVdLLk~~p~ 89 (143)
++---+.++.|..|++|||+....
T Consensus 6 a~cYp~~~~~Fp~~L~~lL~~~~~ 29 (52)
T PF08158_consen 6 AHCYPKETKDFPQELIDLLRNHHT 29 (52)
T ss_pred ccccHHHHHHHHHHHHHHHHhccc
Confidence 333345788999999999998643
No 10
>PF02671 PAH: Paired amphipathic helix repeat; InterPro: IPR003822 This family contains the paired amphipathic helix (PAH) repeat. The family contains the eukaryotic Sin3 proteins, which have at least three PAH domains (PAH1, PAH2, and PAH3). Sin3 proteins are components of a co-repressor complex that silences transcription, playing important roles in the transition between proliferation and differentiation. Sin3 proteins are recruited to the DNA by various DNA-binding transcription factors such as the Mad family of repressors, Mnt/Rox, PLZF, MeCP2, p53, REST/NRSF, MNFbeta, Sp1, TGIF and Ume6 []. Sin3 acts as a scaffold protein that in turn recruits histone-binding proteins RbAp46/RbAp48 and histone deacetylases HDAC1/HDAC2, which deacetylate the core histones resulting in a repressed state of the chromatin []. The PAH domains are protein-protein interaction domains through which Sin3 fulfils its role as a scaffold. The PAH2 domain of Sin3 can interact with a wide range of unrelated and structurally diverse transcription factors that bind using different interaction motifs. For example, the Sin3 PAH2 domain can interact with the unrelated Mad and HBP1 factors using alternative interaction motifs that involve binding in opposite helical orientations [].; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 1S5Q_B 2L9S_B 1G1E_B 1S5R_B 2CR7_A 2CZY_A 2LD7_B 2RMR_A 2RMS_A 1PD7_A ....
Probab=23.33 E-value=12 Score=23.07 Aligned_cols=24 Identities=33% Similarity=0.689 Sum_probs=19.7
Q ss_pred HHHHHHHHhhhCCCcccccCcccc
Q psy7757 76 LCRELVDLLKTFPHCQMVFNKFIP 99 (143)
Q Consensus 76 FarEvVdLLk~~p~c~m~F~kFip 99 (143)
...++.+||+..|.-..-|+.|+|
T Consensus 24 v~~~v~~Ll~~hpdLl~~F~~FlP 47 (47)
T PF02671_consen 24 VIEEVSELLRGHPDLLEEFNRFLP 47 (47)
T ss_dssp HHHHHHHHTTT-HHHHHHHHHHSS
T ss_pred HHHHHHHHHccCHHHHHHHHhhCc
Confidence 556799999999999888988887
No 11
>KOG1179|consensus
Probab=22.60 E-value=64 Score=31.37 Aligned_cols=18 Identities=22% Similarity=0.183 Sum_probs=16.4
Q ss_pred hHhHHHHHHHHhhhCCCc
Q psy7757 73 MSLLCRELVDLLKTFPHC 90 (143)
Q Consensus 73 l~qFarEvVdLLk~~p~c 90 (143)
..|+-.|++-+|.++|++
T Consensus 334 v~QYIGElcRYLl~~p~~ 351 (649)
T KOG1179|consen 334 VIQYIGELCRYLLNQPPS 351 (649)
T ss_pred eeehHHHHHHHHHcCCCC
Confidence 349999999999999999
No 12
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase. Flavoprotein pyridine nucleotide cytochrome reductases [] (FPNCR) catalyse the interchange of reducing equivalents between one-electron carriers and the two-electron-carrying nicotinamide dinucleotides. The enzymes include ferredoxin:NADP+reductases (FNR) [], plant and fungal NAD(P)H:nitrate reductases [, ], NADH:cytochrome b5 reductases [], NADPH:P450 reductases [], NADPH:sulphite reductases [], nitric oxide synthases [], phthalate dioxygenase reductase [], and various other flavoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3QFR_B 3FJO_A 3QFC_B 3QE2_B 3QFS_A 3QFT_A 2B5O_B 2QTZ_A 2QTL_A 2BPO_B ....
Probab=22.40 E-value=28 Score=27.26 Aligned_cols=23 Identities=30% Similarity=0.775 Sum_probs=17.9
Q ss_pred HHHHHHhhhCCCcccccCcccch
Q psy7757 78 RELVDLLKTFPHCQMVFNKFIPA 100 (143)
Q Consensus 78 rEvVdLLk~~p~c~m~F~kFipa 100 (143)
+.++|+|+.+|.|.+|+..|+..
T Consensus 151 ~t~~dil~~fps~~~pl~~ll~~ 173 (219)
T PF00667_consen 151 RTLLDILEDFPSCKPPLEELLEL 173 (219)
T ss_dssp HCHHHHHHHSTTBTC-HHHHHHH
T ss_pred CcHHHHHhhCcccCCCHHHhhhh
Confidence 44899999999999998877643
No 13
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=22.12 E-value=63 Score=24.11 Aligned_cols=50 Identities=12% Similarity=0.203 Sum_probs=29.8
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch-hhhhccccccccccchhhHH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA-YHHHFGRQCRVADYGFTKLI 120 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa-YHhHFGrQCRvsdYGftKL~ 120 (143)
.....+++++++-|.....+.+.-.++-|+ ..---.-+++++|||+.+..
T Consensus 106 ~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 106 SVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 345578888888887766665433333222 11112236999999987653
No 14
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=21.41 E-value=60 Score=24.22 Aligned_cols=52 Identities=12% Similarity=0.177 Sum_probs=32.7
Q ss_pred cchhhHhHHHHHHHHhhhCCCcccccCcccch-hhhhccccccccccchhhHH
Q psy7757 69 LQGQMSLLCRELVDLLKTFPHCQMVFNKFIPA-YHHHFGRQCRVADYGFTKLI 120 (143)
Q Consensus 69 ~~~~l~qFarEvVdLLk~~p~c~m~F~kFipa-YHhHFGrQCRvsdYGftKL~ 120 (143)
..+.+..++.++++-|+....+.+.-.++-|+ .-..-...++++|||+.+..
T Consensus 105 ~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 105 DLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeec
Confidence 34566788999998888776665444443333 11112346999999987653
No 15
>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]
Probab=21.04 E-value=30 Score=29.99 Aligned_cols=34 Identities=18% Similarity=0.375 Sum_probs=20.8
Q ss_pred hhHhHHHHHHHHhhhCCCcccccCcccch--hhhhcccc
Q psy7757 72 QMSLLCRELVDLLKTFPHCQMVFNKFIPA--YHHHFGRQ 108 (143)
Q Consensus 72 ~l~qFarEvVdLLk~~p~c~m~F~kFipa--YHhHFGrQ 108 (143)
.-.+|=.++.-+= .--+.|-.-|+.+ ||||+|--
T Consensus 181 eA~~fY~~~LG~~---~~~~~~~A~F~a~G~YHHHia~N 216 (265)
T COG2514 181 EAEQFYEDVLGLE---VTARGPSALFLASGDYHHHLAAN 216 (265)
T ss_pred HHHHHHHHhcCCe---eeecCCcceEEecCCcceeEEEe
Confidence 3345555544332 2224677788888 99999843
Done!