Query psy7757
Match_columns 143
No_of_seqs 47 out of 49
Neff 2.4
Searched_HMMs 13730
Date Fri Aug 16 18:03:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7757.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7757hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1mqba_ d.144.1.7 (A:) epha2 r 40.6 6 0.00043 28.2 1.9 49 71-121 110-161 (283)
2 d1lufa_ d.144.1.7 (A:) Musk ty 35.6 5.7 0.00042 28.4 1.1 41 72-120 141-190 (301)
3 d1sm2a_ d.144.1.7 (A:) Tyrosin 28.3 19 0.0014 25.1 2.8 48 71-120 101-151 (263)
4 d1uwha_ d.144.1.7 (A:) B-Raf k 26.3 14 0.001 26.4 1.8 53 70-122 103-156 (276)
5 d1ywna1 d.144.1.7 (A:818-1166) 24.2 16 0.0011 25.7 1.8 48 71-119 134-183 (299)
6 d1ja1a1 b.43.4.1 (A:240-518) N 23.2 9.7 0.00071 28.4 0.4 22 78-99 186-207 (279)
7 d2f05a1 a.59.1.1 (A:1-85) Sin3 22.6 4.8 0.00035 25.5 -1.2 26 75-100 57-82 (85)
8 d1qpca_ d.144.1.7 (A:) Lymphoc 22.6 14 0.001 26.1 1.1 50 71-120 109-159 (272)
9 d1mp8a_ d.144.1.7 (A:) Focal a 22.4 15 0.0011 25.7 1.3 51 71-121 108-159 (273)
10 d1fmka3 d.144.1.7 (A:249-533) 22.4 18 0.0013 25.9 1.8 49 71-120 113-163 (285)
11 d1jpaa_ d.144.1.7 (A:) ephb2 r 22.1 22 0.0016 25.4 2.3 53 71-124 128-182 (299)
12 d1rjba_ d.144.1.7 (A:) Fl cyto 22.1 14 0.001 26.7 1.2 51 71-121 164-215 (325)
13 d1ua2a_ d.144.1.7 (A:) Cell di 21.9 18 0.0013 25.4 1.7 49 71-119 100-149 (299)
14 d1xkka_ d.144.1.7 (A:) EGF rec 21.2 19 0.0014 25.7 1.8 51 71-121 111-162 (317)
15 d1opja_ d.144.1.7 (A:) Abelson 20.9 20 0.0015 25.5 1.8 49 71-120 115-165 (287)
16 d1koaa2 d.144.1.7 (A:5915-6264 20.9 23 0.0017 26.2 2.2 52 69-120 122-176 (350)
17 d1n62a1 a.56.1.1 (A:82-163) Ca 20.7 17 0.0013 23.5 1.3 33 97-129 9-42 (82)
18 d1t3qa1 a.56.1.1 (A:88-168) Qu 20.5 18 0.0013 23.3 1.3 30 99-128 10-40 (81)
19 d1wfxa_ d.166.1.5 (A:) Probabl 20.4 26 0.0019 25.0 2.4 37 75-127 2-38 (180)
20 d1r0pa_ d.144.1.7 (A:) Hepatoc 20.3 28 0.002 25.1 2.5 50 71-121 130-181 (311)
21 d1f20a1 b.43.4.1 (A:963-1232) 20.1 12 0.0009 27.5 0.5 20 80-99 184-203 (270)
No 1
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.62 E-value=6 Score=28.15 Aligned_cols=49 Identities=16% Similarity=0.391 Sum_probs=30.0
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch---hhhhccccccccccchhhHHH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA---YHHHFGRQCRVADYGFTKLID 121 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa---YHhHFGrQCRvsdYGftKL~d 121 (143)
.....++.++..-|.+...+.+---++=|+ ...+ ..++++|||+.|..+
T Consensus 110 ~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~--~~~Kl~DFGla~~~~ 161 (283)
T d1mqba_ 110 LQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN--LVCKVSDFGLSRVLE 161 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--CCEEECCCCC-----
T ss_pred HHHHHHHHHHHHhhhhccccccccCccccceEEECCC--CeEEEcccchhhccc
Confidence 456689999999998876665544444443 1222 368999999998764
No 2
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=35.56 E-value=5.7 Score=28.43 Aligned_cols=41 Identities=15% Similarity=0.368 Sum_probs=29.1
Q ss_pred hhHhHHHHHHHHhhhCCCcccccCcccchhhhhc---------cccccccccchhhHH
Q psy7757 72 QMSLLCRELVDLLKTFPHCQMVFNKFIPAYHHHF---------GRQCRVADYGFTKLI 120 (143)
Q Consensus 72 ~l~qFarEvVdLLk~~p~c~m~F~kFipaYHhHF---------GrQCRvsdYGftKL~ 120 (143)
....|++++.+-|.+.....+ .|+.. ...++++|||+.+..
T Consensus 141 ~~~~i~~qi~~gl~ylH~~~i--------vHrDlKp~NILld~~~~~Kl~DFGls~~~ 190 (301)
T d1lufa_ 141 EQLCIARQVAAGMAYLSERKF--------VHRDLATRNCLVGENMVVKIADFGLSRNI 190 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC--------CCSCCSGGGEEECGGGCEEECCCSCHHHH
T ss_pred HHHHHHHHHHHHhhhcccCCe--------EeeEEcccceEECCCCcEEEccchhheec
Confidence 456889999988887655432 24444 346999999998754
No 3
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.34 E-value=19 Score=25.09 Aligned_cols=48 Identities=10% Similarity=0.348 Sum_probs=28.3
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch---hhhhccccccccccchhhHH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA---YHHHFGRQCRVADYGFTKLI 120 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa---YHhHFGrQCRvsdYGftKL~ 120 (143)
+....++.++++=|++.....+--.++=|+ .-. .-.++++|||+.+..
T Consensus 101 ~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~--~~~~Kl~DFGla~~~ 151 (263)
T d1sm2a_ 101 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE--NQVIKVSDFGMTRFV 151 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECG--GGCEEECSCC-----
T ss_pred HHHHHHHHHHHHHHHhhhccceeecccchhheeecC--CCCeEecccchheec
Confidence 455689999998888776655544444443 111 236899999998764
No 4
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.32 E-value=14 Score=26.37 Aligned_cols=53 Identities=8% Similarity=0.152 Sum_probs=30.8
Q ss_pred chhhHhHHHHHHHHhhhCCCcccccCcccch-hhhhccccccccccchhhHHHH
Q psy7757 70 QGQMSLLCRELVDLLKTFPHCQMVFNKFIPA-YHHHFGRQCRVADYGFTKLIDL 122 (143)
Q Consensus 70 ~~~l~qFarEvVdLLk~~p~c~m~F~kFipa-YHhHFGrQCRvsdYGftKL~dL 122 (143)
......|+.++++-|.+.....+--.++=|+ .=-.-...++++|||+.+..+-
T Consensus 103 ~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~ 156 (276)
T d1uwha_ 103 MIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR 156 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC---
T ss_pred HHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccc
Confidence 3467789999999887655443333333232 0001124689999999887653
No 5
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.23 E-value=16 Score=25.68 Aligned_cols=48 Identities=4% Similarity=0.151 Sum_probs=25.1
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch--hhhhccccccccccchhhH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA--YHHHFGRQCRVADYGFTKL 119 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa--YHhHFGrQCRvsdYGftKL 119 (143)
+....++.++++=|++.....+---++=|+ .=-..| .++++|||+.|.
T Consensus 134 ~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~-~~Kl~DFGla~~ 183 (299)
T d1ywna1 134 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN-VVKICDFGLARD 183 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGG-CEEECC------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCC-cEEEccCcchhh
Confidence 456688999998888765444433333333 111222 699999999875
No 6
>d1ja1a1 b.43.4.1 (A:240-518) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.15 E-value=9.7 Score=28.38 Aligned_cols=22 Identities=14% Similarity=0.458 Sum_probs=19.2
Q ss_pred HHHHHHhhhCCCcccccCcccc
Q psy7757 78 RELVDLLKTFPHCQMVFNKFIP 99 (143)
Q Consensus 78 rEvVdLLk~~p~c~m~F~kFip 99 (143)
+.++|+|+.+|.|++|+..|+.
T Consensus 186 ~~ildlL~~fps~~~pl~~ll~ 207 (279)
T d1ja1a1 186 RHILAILQDYPSLRPPIDHLCE 207 (279)
T ss_dssp CCHHHHHHHSTTBCCCHHHHHH
T ss_pred CCHHHHHhhCcccCCCHHHHHH
Confidence 4689999999999999988865
No 7
>d2f05a1 a.59.1.1 (A:1-85) Sin3B {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.56 E-value=4.8 Score=25.47 Aligned_cols=26 Identities=19% Similarity=0.392 Sum_probs=22.7
Q ss_pred hHHHHHHHHhhhCCCcccccCcccch
Q psy7757 75 LLCRELVDLLKTFPHCQMVFNKFIPA 100 (143)
Q Consensus 75 qFarEvVdLLk~~p~c~m~F~kFipa 100 (143)
..-.+|-+||+..|.-..-|+.|.|.
T Consensus 57 ev~~~V~~Lf~~hpdLl~~F~~FLP~ 82 (85)
T d2f05a1 57 EVFTEVANLFRGQEDLLSEFGQFLPE 82 (85)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHSCG
T ss_pred HHHHHHHHHHccCHHHHHHHHHHCcc
Confidence 34457999999999999999999997
No 8
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.56 E-value=14 Score=26.06 Aligned_cols=50 Identities=14% Similarity=0.313 Sum_probs=30.7
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch-hhhhccccccccccchhhHH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA-YHHHFGRQCRVADYGFTKLI 120 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa-YHhHFGrQCRvsdYGftKL~ 120 (143)
+....++.++++-|++.....+-=.++=|+ ----=...++++|||+.++.
T Consensus 109 ~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~ 159 (272)
T d1qpca_ 109 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEc
Confidence 456689999998888776554433333222 00001247899999998753
No 9
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.39 E-value=15 Score=25.67 Aligned_cols=51 Identities=12% Similarity=0.248 Sum_probs=26.6
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch-hhhhccccccccccchhhHHH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA-YHHHFGRQCRVADYGFTKLID 121 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa-YHhHFGrQCRvsdYGftKL~d 121 (143)
.....++.++++-|.+.....+--.++-|+ ..--=.-+++++|||+.+..+
T Consensus 108 ~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~ 159 (273)
T d1mp8a_ 108 ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 159 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred HHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheecc
Confidence 467789999999888876665544333333 100011269999999988654
No 10
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.35 E-value=18 Score=25.94 Aligned_cols=49 Identities=20% Similarity=0.341 Sum_probs=31.9
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccchhhhhc--cccccccccchhhHH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPAYHHHF--GRQCRVADYGFTKLI 120 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipaYHhHF--GrQCRvsdYGftKL~ 120 (143)
+.+..++.++++-|++.....+--.++=|+= --+ ..+++++|||+.++.
T Consensus 113 ~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~N-Ill~~~~~~kl~DfGla~~~ 163 (285)
T d1fmka3 113 PQLVDMAAQIASGMAYVERMNYVHRDLRAAN-ILVGENLVCKVADFGLARLI 163 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG-EEECGGGCEEECCCCTTC--
T ss_pred HHHHHHHHHHHHHHHHHhhhheecccccceE-EEECCCCcEEEcccchhhhc
Confidence 4667899999999988776655444443331 001 136999999998865
No 11
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.14 E-value=22 Score=25.43 Aligned_cols=53 Identities=15% Similarity=0.279 Sum_probs=26.3
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch--hhhhccccccccccchhhHHHHHh
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA--YHHHFGRQCRVADYGFTKLIDLLE 124 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa--YHhHFGrQCRvsdYGftKL~dLle 124 (143)
.....+++++.+=|.+.....+---++=|+ .=- -.-.+|++|||+.+..+--.
T Consensus 128 ~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~-~~~~~Kl~DFGla~~~~~~~ 182 (299)
T d1jpaa_ 128 IQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVN-SNLVCKVSDFGLSRFLEDDT 182 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-TTCCEEECCC----------
T ss_pred HHHHHHHHHHHHHHHHHhhCCCccCccccceEEEC-CCCcEEECCcccceEccCCC
Confidence 356689999999888776554433333332 000 12369999999998765433
No 12
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.08 E-value=14 Score=26.67 Aligned_cols=51 Identities=10% Similarity=0.210 Sum_probs=31.6
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch-hhhhccccccccccchhhHHH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA-YHHHFGRQCRVADYGFTKLID 121 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa-YHhHFGrQCRvsdYGftKL~d 121 (143)
+....++.++++=|++.....+---++=|+ ---.-...++++|||+.|...
T Consensus 164 ~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~ 215 (325)
T d1rjba_ 164 EDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 215 (325)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGG
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeecccccccc
Confidence 456689999999888765554333333232 001113479999999988643
No 13
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.86 E-value=18 Score=25.37 Aligned_cols=49 Identities=12% Similarity=0.169 Sum_probs=33.5
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch-hhhhccccccccccchhhH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA-YHHHFGRQCRVADYGFTKL 119 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa-YHhHFGrQCRvsdYGftKL 119 (143)
.....+.++++.-|++.....+--.++=|+ .----..+++++|||+.+.
T Consensus 100 ~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~ 149 (299)
T d1ua2a_ 100 SHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKS 149 (299)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred HHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccc
Confidence 467799999999998877666655555444 1111124789999999864
No 14
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.18 E-value=19 Score=25.75 Aligned_cols=51 Identities=12% Similarity=0.297 Sum_probs=31.9
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch-hhhhccccccccccchhhHHH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA-YHHHFGRQCRVADYGFTKLID 121 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa-YHhHFGrQCRvsdYGftKL~d 121 (143)
.....++.|++.-|.+.....+--.++=|+ .---=...++++|||+.+...
T Consensus 111 ~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 162 (317)
T d1xkka_ 111 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 162 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecc
Confidence 456688999988887776554443333333 000012368999999988753
No 15
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.90 E-value=20 Score=25.46 Aligned_cols=49 Identities=10% Similarity=0.278 Sum_probs=31.0
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch--hhhhccccccccccchhhHH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA--YHHHFGRQCRVADYGFTKLI 120 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa--YHhHFGrQCRvsdYGftKL~ 120 (143)
.....++.++++-|++..+..+--.++=|+ .=-.- .+++++|||+.+..
T Consensus 115 ~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~-~~~Kl~DFG~a~~~ 165 (287)
T d1opja_ 115 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN-HLVKVADFGLSRLM 165 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG-GCEEECCCCCTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCC-CcEEEccccceeec
Confidence 356688999999888766554433333333 10111 26999999998853
No 16
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=20.85 E-value=23 Score=26.18 Aligned_cols=52 Identities=13% Similarity=0.239 Sum_probs=35.8
Q ss_pred cchhhHhHHHHHHHHhhhCCCcccccCcccch---hhhhccccccccccchhhHH
Q psy7757 69 LQGQMSLLCRELVDLLKTFPHCQMVFNKFIPA---YHHHFGRQCRVADYGFTKLI 120 (143)
Q Consensus 69 ~~~~l~qFarEvVdLLk~~p~c~m~F~kFipa---YHhHFGrQCRvsdYGftKL~ 120 (143)
-++....+++++++-|++.....+--.++=|+ .-....-+++++|||+.+..
T Consensus 122 ~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~ 176 (350)
T d1koaa2 122 SEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 176 (350)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheec
Confidence 34567789999999999887666554454454 22223347899999998753
No 17
>d1n62a1 a.56.1.1 (A:82-163) Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain {Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]}
Probab=20.66 E-value=17 Score=23.48 Aligned_cols=33 Identities=21% Similarity=0.357 Sum_probs=26.8
Q ss_pred ccchhhhhccccccccccch-hhHHHHHhhccce
Q psy7757 97 FIPAYHHHFGRQCRVADYGF-TKLIDLLEAIPHV 129 (143)
Q Consensus 97 FipaYHhHFGrQCRvsdYGf-tKL~dLleaIp~v 129 (143)
+-.++..|.|-||=+|.=|+ ..+.+||+.-|+-
T Consensus 9 vQ~Af~~~~a~QCGfCtPG~im~~~~Ll~~~~~p 42 (82)
T d1n62a1 9 LQEGFRMMHGLQCGYCTPGMIMRSHRLLQENPSP 42 (82)
T ss_dssp HHHHHHHTTCCSSCSSHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHcCCCccCCcchHHHHHHHHHHhhhccc
Confidence 34578889999999999998 5688999887753
No 18
>d1t3qa1 a.56.1.1 (A:88-168) Quinoline 2-oxidoreductase small subunit QorS, C-domain {Pseudomonas putida [TaxId: 303]}
Probab=20.45 E-value=18 Score=23.35 Aligned_cols=30 Identities=20% Similarity=0.414 Sum_probs=24.9
Q ss_pred chhhhhccccccccccchh-hHHHHHhhccc
Q psy7757 99 PAYHHHFGRQCRVADYGFT-KLIDLLEAIPH 128 (143)
Q Consensus 99 paYHhHFGrQCRvsdYGft-KL~dLleaIp~ 128 (143)
.++--|+|-||=+|.=||. .+.+||+.-|+
T Consensus 10 ~Af~~~~a~QCGfCtPG~vm~~~~ll~~~~~ 40 (81)
T d1t3qa1 10 DSFRRHHALQCGFCTAGMLATARSILAENPA 40 (81)
T ss_dssp HHHHHTTCCSSCSSHHHHHHHHHHHHHHCSS
T ss_pred HHHHHcCCCCCCCCchHHHHHHHHHHhcCCC
Confidence 4678899999999999987 77888887665
No 19
>d1wfxa_ d.166.1.5 (A:) Probable RNA 2'-phosphotransferase KptA {Aeropyrum pernix [TaxId: 56636]}
Probab=20.37 E-value=26 Score=25.00 Aligned_cols=37 Identities=19% Similarity=0.525 Sum_probs=28.0
Q ss_pred hHHHHHHHHhhhCCCcccccCcccchhhhhccccccccccchhhHHHHHhhcc
Q psy7757 75 LLCRELVDLLKTFPHCQMVFNKFIPAYHHHFGRQCRVADYGFTKLIDLLEAIP 127 (143)
Q Consensus 75 qFarEvVdLLk~~p~c~m~F~kFipaYHhHFGrQCRvsdYGftKL~dLleaIp 127 (143)
++++.+-=+|+|.|.- ||-+ +-..||.++.|||+++.
T Consensus 2 ~lSK~LS~~LRH~p~~--------------~gL~--~d~~G~v~v~dLl~~~~ 38 (180)
T d1wfxa_ 2 RLSKTLAGILRHHPGR--------------YGVR--LTREGWARVSEVVEGLR 38 (180)
T ss_dssp CHHHHHHHHHHTCTGG--------------GTCC--CCTTCCEEHHHHHHHHH
T ss_pred eeHHHHHHHHCCCHhH--------------CCCC--cCCCCCEEHHHHHHHHH
Confidence 5677788888888754 6654 45679999999998753
No 20
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.29 E-value=28 Score=25.08 Aligned_cols=50 Identities=12% Similarity=0.171 Sum_probs=32.7
Q ss_pred hhhHhHHHHHHHHhhhCCCcccccCcccch--hhhhccccccccccchhhHHH
Q psy7757 71 GQMSLLCRELVDLLKTFPHCQMVFNKFIPA--YHHHFGRQCRVADYGFTKLID 121 (143)
Q Consensus 71 ~~l~qFarEvVdLLk~~p~c~m~F~kFipa--YHhHFGrQCRvsdYGftKL~d 121 (143)
....+++.++.+-|.+.....+.-.++=|+ .=-. .-.++++|||+.+...
T Consensus 130 ~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~-~~~~kL~DFG~~~~~~ 181 (311)
T d1r0pa_ 130 KDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE-KFTVKVADFGLARDMY 181 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECT-TCCEEECSSGGGCCTT
T ss_pred HHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECC-CCCEEEecccchhhcc
Confidence 345689999999888776665554444443 1011 1368999999998653
No 21
>d1f20a1 b.43.4.1 (A:963-1232) Neuronal nitric-oxide synthase FAD/NADP+ domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.08 E-value=12 Score=27.51 Aligned_cols=20 Identities=30% Similarity=0.589 Sum_probs=17.4
Q ss_pred HHHHhhhCCCcccccCcccc
Q psy7757 80 LVDLLKTFPHCQMVFNKFIP 99 (143)
Q Consensus 80 vVdLLk~~p~c~m~F~kFip 99 (143)
++|+|+.+|.|++|+..|+.
T Consensus 184 lldvL~~fps~~~pl~~ll~ 203 (270)
T d1f20a1 184 MVEVLEEFPSIQMPATLLLT 203 (270)
T ss_dssp HHHHHHHSTTBCBCHHHHHH
T ss_pred HHHHHHhccccCCCHHHHHH
Confidence 78999999999999887764
Done!