Query psy7767
Match_columns 200
No_of_seqs 205 out of 1150
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 18:19:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7767.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7767hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 99.8 2.3E-19 7.9E-24 169.3 10.9 134 55-190 67-206 (740)
2 1z68_A Fibroblast activation p 99.6 8.6E-16 2.9E-20 142.4 11.2 94 96-189 110-203 (719)
3 1xfd_A DIP, dipeptidyl aminope 99.5 2.6E-14 9E-19 131.6 10.6 91 98-188 116-206 (723)
4 2z3z_A Dipeptidyl aminopeptida 99.2 6.2E-11 2.1E-15 109.3 10.2 91 95-189 120-215 (706)
5 2ecf_A Dipeptidyl peptidase IV 99.2 6E-11 2E-15 109.8 9.8 90 90-181 145-235 (741)
6 2gop_A Trilobed protease; beta 98.6 3.1E-07 1.1E-11 76.5 12.1 60 96-175 59-124 (347)
7 3c5m_A Oligogalacturonate lyas 98.6 2.6E-07 8.8E-12 77.6 9.9 61 98-176 38-102 (396)
8 2hqs_A Protein TOLB; TOLB, PAL 98.6 7.6E-07 2.6E-11 78.4 12.8 73 95-186 178-254 (415)
9 3pe7_A Oligogalacturonate lyas 98.5 2.1E-07 7.2E-12 78.5 8.6 71 87-175 21-101 (388)
10 2hqs_A Protein TOLB; TOLB, PAL 98.5 1.3E-06 4.5E-11 76.9 13.6 75 95-188 222-300 (415)
11 2xdw_A Prolyl endopeptidase; a 98.5 6E-07 2E-11 84.0 11.2 62 97-177 126-193 (710)
12 3o4h_A Acylamino-acid-releasin 98.4 7E-07 2.4E-11 80.8 8.8 67 99-185 153-224 (582)
13 3pe7_A Oligogalacturonate lyas 98.4 5.7E-07 1.9E-11 75.9 7.2 67 95-178 187-261 (388)
14 2ojh_A Uncharacterized protein 98.4 3.9E-06 1.3E-10 66.4 11.5 75 95-186 41-117 (297)
15 2bkl_A Prolyl endopeptidase; m 98.3 2.5E-06 8.7E-11 79.7 11.3 63 97-177 122-190 (695)
16 3azo_A Aminopeptidase; POP fam 98.3 9.9E-07 3.4E-11 80.6 8.3 61 97-176 131-209 (662)
17 2ecf_A Dipeptidyl peptidase IV 98.3 1.3E-06 4.5E-11 80.7 8.7 59 97-174 110-171 (741)
18 1k32_A Tricorn protease; prote 98.3 2.7E-06 9.3E-11 83.1 10.8 85 90-187 46-142 (1045)
19 4a5s_A Dipeptidyl peptidase 4 98.3 5.6E-07 1.9E-11 84.8 5.5 56 99-173 65-130 (740)
20 2ojh_A Uncharacterized protein 98.3 8.9E-06 3.1E-10 64.3 11.6 72 96-187 85-161 (297)
21 3azo_A Aminopeptidase; POP fam 98.2 1.3E-05 4.3E-10 73.2 11.8 80 88-186 178-272 (662)
22 2gop_A Trilobed protease; beta 98.2 7.2E-06 2.5E-10 68.2 9.1 56 96-176 15-80 (347)
23 1xfd_A DIP, dipeptidyl aminope 98.1 3.1E-06 1.1E-10 77.7 7.1 62 97-174 62-133 (723)
24 1z68_A Fibroblast activation p 98.1 2.1E-06 7.2E-11 79.3 5.7 55 97-173 61-128 (719)
25 3c5m_A Oligogalacturonate lyas 98.1 2.4E-05 8.2E-10 65.5 11.6 81 101-189 287-385 (396)
26 1yr2_A Prolyl oligopeptidase; 98.1 1.1E-05 3.6E-10 76.2 9.5 61 97-177 164-230 (741)
27 1k32_A Tricorn protease; prote 98.0 1.9E-05 6.4E-10 77.2 10.1 71 95-186 14-87 (1045)
28 2xe4_A Oligopeptidase B; hydro 98.0 1.9E-05 6.5E-10 75.5 9.0 61 97-177 175-243 (751)
29 2z3z_A Dipeptidyl aminopeptida 97.9 9.9E-05 3.4E-09 67.8 12.3 72 89-180 347-426 (706)
30 3o4h_A Acylamino-acid-releasin 97.9 3.4E-05 1.2E-09 69.7 8.9 85 88-184 186-274 (582)
31 3iuj_A Prolyl endopeptidase; h 97.9 8.9E-05 3E-09 69.6 11.7 94 56-176 94-195 (693)
32 2bkl_A Prolyl endopeptidase; m 97.7 0.00021 7.1E-09 66.7 11.5 70 99-184 171-257 (695)
33 2xdw_A Prolyl endopeptidase; a 97.6 0.00032 1.1E-08 65.5 11.0 74 98-187 173-267 (710)
34 4h5i_A Guanine nucleotide-exch 97.6 0.0003 1E-08 60.4 9.7 75 95-187 269-344 (365)
35 3u4y_A Uncharacterized protein 97.6 0.00081 2.8E-08 55.1 11.3 74 92-184 79-158 (331)
36 3hfq_A Uncharacterized protein 97.5 0.00028 9.7E-09 58.7 8.0 74 95-185 39-116 (347)
37 2xe4_A Oligopeptidase B; hydro 97.5 0.00033 1.1E-08 66.9 9.4 73 98-187 223-303 (751)
38 3bws_A Protein LP49; two-domai 97.5 0.0011 3.8E-08 56.4 11.8 72 94-184 343-430 (433)
39 1l0q_A Surface layer protein; 97.4 0.0011 3.9E-08 55.5 11.1 70 94-182 30-101 (391)
40 3scy_A Hypothetical bacterial 97.4 0.00075 2.6E-08 56.6 9.7 78 95-185 210-290 (361)
41 1l0q_A Surface layer protein; 97.4 0.0019 6.4E-08 54.2 11.8 70 94-182 72-143 (391)
42 1ri6_A Putative isomerase YBHE 97.4 0.002 6.9E-08 52.2 11.4 74 94-184 36-113 (343)
43 1pby_B Quinohemoprotein amine 97.3 0.0024 8.1E-08 51.7 11.3 57 97-172 83-152 (337)
44 4h5i_A Guanine nucleotide-exch 97.3 0.0032 1.1E-07 53.9 12.6 69 92-177 173-242 (365)
45 1pby_B Quinohemoprotein amine 97.2 0.0018 6.2E-08 52.4 9.5 56 97-172 242-297 (337)
46 3vgz_A Uncharacterized protein 97.2 0.0012 4.2E-08 54.1 8.4 65 94-177 39-111 (353)
47 1ri6_A Putative isomerase YBHE 97.2 0.0021 7E-08 52.2 9.6 76 90-184 78-158 (343)
48 3scy_A Hypothetical bacterial 97.2 0.0017 5.8E-08 54.4 9.3 73 97-186 260-337 (361)
49 1yr2_A Prolyl oligopeptidase; 97.2 0.0022 7.7E-08 60.2 11.1 71 99-186 212-301 (741)
50 1jmx_B Amine dehydrogenase; ox 97.2 0.0088 3E-07 48.6 13.3 66 97-175 44-112 (349)
51 3u4y_A Uncharacterized protein 97.2 0.0019 6.6E-08 52.8 9.2 60 94-172 174-238 (331)
52 3hfq_A Uncharacterized protein 97.1 0.0014 4.9E-08 54.4 8.2 74 97-186 241-317 (347)
53 1jof_A Carboxy-CIS,CIS-muconat 97.1 0.0023 7.8E-08 54.4 9.3 76 95-184 144-222 (365)
54 3iuj_A Prolyl endopeptidase; h 97.1 0.0039 1.3E-07 58.5 11.4 66 98-179 177-258 (693)
55 1jmx_B Amine dehydrogenase; ox 97.0 0.0039 1.3E-07 50.8 9.3 55 97-171 256-311 (349)
56 1gxr_A ESG1, transducin-like e 96.9 0.025 8.4E-07 45.4 13.4 71 95-185 265-336 (337)
57 1nr0_A Actin interacting prote 96.9 0.0036 1.2E-07 57.3 8.9 69 96-183 19-87 (611)
58 3s25_A Hypothetical 7-bladed b 96.8 0.0072 2.5E-07 52.1 10.2 35 101-135 109-148 (302)
59 1pgu_A Actin interacting prote 96.8 0.0056 1.9E-07 53.9 9.5 72 95-185 18-96 (615)
60 3frx_A Guanine nucleotide-bind 96.8 0.018 6.1E-07 47.9 12.0 83 92-185 234-316 (319)
61 1gxr_A ESG1, transducin-like e 96.8 0.023 7.7E-07 45.7 12.2 70 94-183 223-293 (337)
62 3ow8_A WD repeat-containing pr 96.7 0.029 9.9E-07 46.9 12.8 70 95-183 164-234 (321)
63 3zwl_B Eukaryotic translation 96.7 0.041 1.4E-06 44.6 13.4 74 95-187 74-152 (369)
64 3bws_A Protein LP49; two-domai 96.7 0.0054 1.9E-07 52.0 8.4 70 94-182 252-330 (433)
65 4aez_A CDC20, WD repeat-contai 96.7 0.016 5.6E-07 49.4 11.2 77 91-185 299-379 (401)
66 3mmy_A MRNA export factor; mRN 96.7 0.0062 2.1E-07 49.5 8.2 62 97-176 275-337 (368)
67 1k8k_C P40, ARP2/3 complex 41 96.7 0.0069 2.4E-07 49.7 8.5 70 95-184 8-81 (372)
68 3vgz_A Uncharacterized protein 96.7 0.018 6.2E-07 46.9 11.0 56 98-172 143-202 (353)
69 3fm0_A Protein CIAO1; WDR39,SG 96.6 0.034 1.2E-06 46.7 12.7 73 95-184 105-179 (345)
70 4aow_A Guanine nucleotide-bind 96.6 0.053 1.8E-06 43.8 13.4 86 90-185 251-336 (340)
71 4ggc_A P55CDC, cell division c 96.6 0.014 4.7E-07 46.8 9.8 67 98-182 28-94 (318)
72 2ymu_A WD-40 repeat protein; u 96.6 0.0088 3E-07 52.7 9.1 69 95-183 16-85 (577)
73 3zwl_B Eukaryotic translation 96.6 0.056 1.9E-06 43.8 13.2 73 94-185 258-345 (369)
74 2mad_H Methylamine dehydrogena 96.5 0.023 8E-07 49.6 11.5 73 89-174 60-144 (373)
75 2vdu_B TRNA (guanine-N(7)-)-me 96.5 0.0097 3.3E-07 51.7 8.8 31 97-127 6-36 (450)
76 3ow8_A WD repeat-containing pr 96.5 0.041 1.4E-06 46.0 12.2 72 95-185 248-320 (321)
77 4gqb_B Methylosome protein 50; 96.4 0.027 9.4E-07 48.0 11.1 73 95-186 257-331 (344)
78 4gga_A P55CDC, cell division c 96.4 0.025 8.4E-07 48.7 10.8 68 98-183 108-175 (420)
79 3vu4_A KMHSV2; beta-propeller 96.4 0.02 6.9E-07 48.5 10.0 74 95-186 195-271 (355)
80 4ggc_A P55CDC, cell division c 96.4 0.048 1.6E-06 43.6 11.6 72 94-184 239-313 (318)
81 2j04_A TAU60, YPL007P, hypothe 96.4 0.0078 2.7E-07 57.3 7.8 74 95-185 85-159 (588)
82 4ery_A WD repeat-containing pr 96.3 0.032 1.1E-06 45.4 10.5 70 95-183 23-93 (312)
83 1erj_A Transcriptional repress 96.3 0.023 7.9E-07 48.6 10.0 85 95-183 64-151 (393)
84 4gga_A P55CDC, cell division c 96.2 0.043 1.5E-06 47.1 11.2 73 94-185 319-394 (420)
85 4aez_A CDC20, WD repeat-contai 96.2 0.065 2.2E-06 45.6 12.2 72 95-185 259-335 (401)
86 3mkq_A Coatomer beta'-subunit; 96.2 0.019 6.6E-07 52.8 9.5 69 95-182 13-82 (814)
87 3s25_A Hypothetical 7-bladed b 96.2 0.015 5.2E-07 50.0 8.3 86 101-189 150-256 (302)
88 2ymu_A WD-40 repeat protein; u 96.2 0.051 1.8E-06 47.8 11.6 69 95-183 467-536 (577)
89 3fm0_A Protein CIAO1; WDR39,SG 96.1 0.042 1.4E-06 46.1 10.1 72 95-184 61-134 (345)
90 1sq9_A Antiviral protein SKI8; 96.0 0.067 2.3E-06 44.4 11.1 81 95-182 233-318 (397)
91 1erj_A Transcriptional repress 96.0 0.031 1E-06 47.8 9.1 67 97-182 125-192 (393)
92 2pm9_A Protein WEB1, protein t 96.0 0.097 3.3E-06 43.6 11.8 75 95-187 262-338 (416)
93 1sq9_A Antiviral protein SKI8; 96.0 0.21 7.2E-06 41.4 13.8 89 95-185 291-394 (397)
94 1jof_A Carboxy-CIS,CIS-muconat 95.9 0.023 7.9E-07 48.1 8.0 72 98-185 256-340 (365)
95 3lrv_A PRE-mRNA-splicing facto 95.9 0.037 1.3E-06 46.1 9.0 70 95-184 170-242 (343)
96 3vl1_A 26S proteasome regulato 95.9 0.045 1.5E-06 46.0 9.6 69 95-182 139-208 (420)
97 2vdu_B TRNA (guanine-N(7)-)-me 95.8 0.11 3.7E-06 45.0 12.1 75 95-185 149-228 (450)
98 3lrv_A PRE-mRNA-splicing facto 95.8 0.073 2.5E-06 44.3 10.5 77 95-184 214-290 (343)
99 4g56_B MGC81050 protein; prote 95.8 0.12 4.2E-06 43.7 12.1 74 95-188 269-345 (357)
100 2mad_H Methylamine dehydrogena 95.8 0.061 2.1E-06 47.0 10.3 64 98-181 269-345 (373)
101 3ei3_B DNA damage-binding prot 95.8 0.14 5E-06 42.6 12.2 71 96-185 164-235 (383)
102 3mkq_A Coatomer beta'-subunit; 95.8 0.1 3.4E-06 48.0 12.1 70 95-183 55-125 (814)
103 1r5m_A SIR4-interacting protei 95.7 0.041 1.4E-06 45.5 8.5 67 96-182 109-176 (425)
104 2xzm_R RACK1; ribosome, transl 95.7 0.13 4.6E-06 42.7 11.7 81 95-185 255-339 (343)
105 1r5m_A SIR4-interacting protei 95.7 0.073 2.5E-06 44.0 10.0 86 95-184 330-423 (425)
106 4g56_B MGC81050 protein; prote 95.7 0.19 6.3E-06 42.6 12.8 70 95-182 139-209 (357)
107 1yfq_A Cell cycle arrest prote 95.7 0.043 1.5E-06 44.5 8.3 69 95-183 11-85 (342)
108 3f3f_A Nucleoporin SEH1; struc 95.6 0.28 9.7E-06 38.8 12.7 72 95-184 57-141 (351)
109 2pbi_B Guanine nucleotide-bind 95.6 0.074 2.5E-06 44.9 9.7 66 97-181 286-352 (354)
110 3i2n_A WD repeat-containing pr 95.5 0.032 1.1E-06 45.3 7.0 71 95-183 18-96 (357)
111 4gqb_B Methylosome protein 50; 95.5 0.085 2.9E-06 44.9 9.9 71 95-183 127-198 (344)
112 3jrp_A Fusion protein of prote 95.5 0.078 2.7E-06 43.2 9.2 74 95-185 206-286 (379)
113 3mmy_A MRNA export factor; mRN 95.5 0.32 1.1E-05 39.2 12.8 69 95-183 86-157 (368)
114 1nr0_A Actin interacting prote 95.5 0.054 1.8E-06 49.4 9.0 71 96-184 449-520 (611)
115 3frx_A Guanine nucleotide-bind 95.4 0.12 4.1E-06 42.8 10.3 59 95-172 196-255 (319)
116 3f3f_A Nucleoporin SEH1; struc 95.4 0.24 8.2E-06 39.2 11.7 32 95-126 214-250 (351)
117 4ery_A WD repeat-containing pr 95.4 0.15 5E-06 41.4 10.6 70 95-183 65-135 (312)
118 1got_B GT-beta; complex (GTP-b 95.4 0.1 3.6E-06 43.4 9.9 67 97-182 272-339 (340)
119 1k8k_C P40, ARP2/3 complex 41 95.4 0.088 3E-06 43.0 9.2 72 95-186 202-274 (372)
120 3k26_A Polycomb protein EED; W 95.4 0.32 1.1E-05 39.3 12.5 72 95-184 115-190 (366)
121 2ynn_A Coatomer subunit beta'; 95.3 0.1 3.4E-06 42.8 9.5 69 95-182 13-82 (304)
122 3odt_A Protein DOA1; ubiquitin 95.3 0.082 2.8E-06 42.0 8.7 71 95-185 225-295 (313)
123 3iz6_a 40S ribosomal protein R 95.3 0.11 3.6E-06 44.2 9.9 72 98-184 301-373 (380)
124 3iz6_a 40S ribosomal protein R 95.3 0.072 2.5E-06 45.3 8.8 72 95-185 66-138 (380)
125 3dwl_C Actin-related protein 2 95.3 0.008 2.7E-07 50.0 2.7 73 95-185 11-85 (377)
126 3vl1_A 26S proteasome regulato 95.3 0.04 1.4E-06 46.3 7.1 72 96-184 248-320 (420)
127 3dw8_B Serine/threonine-protei 95.3 0.12 4.1E-06 43.6 10.0 92 94-186 27-126 (447)
128 1got_B GT-beta; complex (GTP-b 95.2 0.17 5.9E-06 42.1 10.5 69 95-182 55-124 (340)
129 2aq5_A Coronin-1A; WD40 repeat 95.1 0.13 4.3E-06 43.6 9.7 71 97-185 222-298 (402)
130 2xzm_R RACK1; ribosome, transl 95.1 0.16 5.4E-06 42.3 10.0 71 95-184 76-147 (343)
131 1yfq_A Cell cycle arrest prote 95.0 0.21 7.1E-06 40.3 10.4 70 95-185 56-130 (342)
132 3dwl_C Actin-related protein 2 95.0 0.03 1E-06 46.4 5.4 68 95-182 55-127 (377)
133 1nir_A Nitrite reductase; hemo 94.9 0.46 1.6E-05 43.4 13.6 73 90-181 173-252 (543)
134 2oiz_A Aromatic amine dehydrog 94.9 0.16 5.5E-06 43.5 9.8 69 91-173 46-126 (361)
135 2j04_A TAU60, YPL007P, hypothe 94.8 0.085 2.9E-06 50.2 8.4 70 97-184 131-209 (588)
136 3dm0_A Maltose-binding peripla 94.8 0.29 1E-05 45.0 11.8 89 94-185 601-692 (694)
137 3jrp_A Fusion protein of prote 94.7 0.16 5.4E-06 41.3 8.8 73 95-185 11-87 (379)
138 3dw8_B Serine/threonine-protei 94.6 0.087 3E-06 44.5 7.3 78 95-184 177-256 (447)
139 2dg1_A DRP35, lactonase; beta 94.6 0.11 3.7E-06 42.6 7.7 59 96-173 135-200 (333)
140 2hes_X YDR267CP; beta-propelle 94.6 0.3 1E-05 40.5 10.5 72 95-184 107-182 (330)
141 3sfz_A APAF-1, apoptotic pepti 94.5 0.19 6.6E-06 48.9 10.5 69 95-182 615-684 (1249)
142 2xyi_A Probable histone-bindin 94.5 0.43 1.5E-05 41.1 11.7 84 95-187 321-411 (430)
143 2pbi_B Guanine nucleotide-bind 94.5 0.26 8.9E-06 41.5 10.1 71 95-184 64-135 (354)
144 2aq5_A Coronin-1A; WD40 repeat 94.4 0.14 4.8E-06 43.3 8.2 70 95-183 81-160 (402)
145 1pgu_A Actin interacting prote 94.3 0.39 1.3E-05 42.0 11.0 71 95-185 531-613 (615)
146 2oit_A Nucleoporin 214KDA; NH2 94.3 0.14 4.7E-06 45.3 8.2 69 95-182 149-219 (434)
147 3dr2_A Exported gluconolactona 94.3 0.18 6.2E-06 41.5 8.4 45 88-133 36-83 (305)
148 3sfz_A APAF-1, apoptotic pepti 94.2 0.58 2E-05 45.6 13.0 68 97-182 800-867 (1249)
149 2pm9_A Protein WEB1, protein t 94.2 0.2 7E-06 41.6 8.6 78 95-184 165-247 (416)
150 3c75_H MADH, methylamine dehyd 94.2 0.41 1.4E-05 43.3 11.1 72 88-172 111-194 (426)
151 2ynn_A Coatomer subunit beta'; 94.1 0.34 1.2E-05 39.6 9.8 70 95-183 55-125 (304)
152 2hes_X YDR267CP; beta-propelle 94.1 0.31 1E-05 40.5 9.5 78 95-184 58-136 (330)
153 3e5z_A Putative gluconolactona 94.1 0.28 9.4E-06 39.7 9.0 45 88-133 19-66 (296)
154 1vyh_C Platelet-activating fac 94.0 0.32 1.1E-05 41.8 9.7 71 95-184 108-179 (410)
155 2oiz_A Aromatic amine dehydrog 93.9 0.11 3.9E-06 44.5 6.6 59 90-168 300-361 (361)
156 2xyi_A Probable histone-bindin 93.7 0.2 6.8E-06 43.2 7.9 73 95-186 277-353 (430)
157 1mda_H Methylamine dehydrogena 93.7 0.19 6.7E-06 44.4 8.0 71 89-172 59-141 (368)
158 2ghs_A AGR_C_1268P; regucalcin 93.6 0.18 6.1E-06 42.3 7.2 55 97-173 135-197 (326)
159 1qks_A Cytochrome CD1 nitrite 93.6 0.66 2.3E-05 43.1 11.7 72 89-180 190-269 (567)
160 3dm0_A Maltose-binding peripla 93.6 0.35 1.2E-05 44.5 9.7 69 95-182 430-499 (694)
161 3i2n_A WD repeat-containing pr 93.4 0.7 2.4E-05 37.2 10.2 70 97-186 166-243 (357)
162 2pm7_B Protein transport prote 93.3 0.41 1.4E-05 39.0 8.7 75 95-186 204-285 (297)
163 3ei3_B DNA damage-binding prot 93.2 0.4 1.4E-05 39.8 8.7 71 95-183 73-147 (383)
164 3e5z_A Putative gluconolactona 93.2 0.42 1.4E-05 38.6 8.5 64 98-183 117-199 (296)
165 4a11_B DNA excision repair pro 93.1 0.25 8.6E-06 40.6 7.3 34 95-128 43-78 (408)
166 4gq1_A NUP37; propeller, trans 93.1 0.38 1.3E-05 41.1 8.6 51 115-185 338-388 (393)
167 3dsm_A Uncharacterized protein 93.1 0.42 1.4E-05 40.0 8.7 33 95-128 224-256 (328)
168 3dr2_A Exported gluconolactona 93.0 0.29 9.9E-06 40.2 7.5 56 98-174 133-207 (305)
169 3g4e_A Regucalcin; six bladed 92.9 0.37 1.3E-05 39.5 8.0 65 98-183 100-177 (297)
170 3dsm_A Uncharacterized protein 92.9 0.4 1.4E-05 40.2 8.3 59 94-171 170-241 (328)
171 4e54_B DNA damage-binding prot 92.8 0.19 6.4E-06 43.4 6.3 70 97-185 211-281 (435)
172 3sjl_D Methylamine dehydrogena 92.8 0.47 1.6E-05 42.5 9.1 70 90-172 73-154 (386)
173 3odt_A Protein DOA1; ubiquitin 92.7 0.53 1.8E-05 37.1 8.4 68 95-182 184-251 (313)
174 2dg1_A DRP35, lactonase; beta 92.6 0.48 1.6E-05 38.6 8.2 37 96-133 45-83 (333)
175 3bg1_A Protein SEC13 homolog; 92.4 0.68 2.3E-05 38.0 9.0 71 95-185 212-292 (316)
176 4a11_B DNA excision repair pro 92.4 1.9 6.4E-05 35.2 11.6 73 94-184 140-216 (408)
177 4e54_B DNA damage-binding prot 92.4 2 6.9E-05 36.8 12.3 72 95-183 164-237 (435)
178 1vyh_C Platelet-activating fac 92.1 1.3 4.4E-05 38.0 10.6 70 95-183 192-262 (410)
179 3g4e_A Regucalcin; six bladed 91.9 4.4 0.00015 32.9 14.2 38 95-133 53-90 (297)
180 3k26_A Polycomb protein EED; W 91.8 0.72 2.5E-05 37.2 8.2 70 95-183 69-144 (366)
181 2ghs_A AGR_C_1268P; regucalcin 91.7 0.31 1.1E-05 40.8 6.1 35 98-132 51-87 (326)
182 1mda_H Methylamine dehydrogena 91.5 0.43 1.5E-05 42.1 7.1 63 101-182 269-342 (368)
183 3vu4_A KMHSV2; beta-propeller 91.5 0.73 2.5E-05 38.7 8.3 33 95-127 19-51 (355)
184 1nir_A Nitrite reductase; hemo 91.4 2.1 7.1E-05 39.0 11.8 77 90-173 216-298 (543)
185 4aow_A Guanine nucleotide-bind 91.3 0.86 2.9E-05 36.5 8.2 57 95-170 215-272 (340)
186 3tc9_A Hypothetical hydrolase; 91.2 3.4 0.00012 36.5 12.8 69 97-182 227-297 (430)
187 2pm7_B Protein transport prote 91.2 0.78 2.7E-05 37.3 7.9 70 95-184 9-84 (297)
188 3fvz_A Peptidyl-glycine alpha- 91.2 1 3.5E-05 37.4 8.8 55 96-167 24-103 (329)
189 3c75_H MADH, methylamine dehyd 90.8 0.49 1.7E-05 42.8 6.9 65 99-182 322-398 (426)
190 1npe_A Nidogen, entactin; glyc 90.0 1.9 6.3E-05 34.5 9.1 58 97-172 123-184 (267)
191 4gq1_A NUP37; propeller, trans 90.0 0.53 1.8E-05 40.2 6.1 72 95-184 136-216 (393)
192 2j04_B YDR362CP, TAU91; beta p 89.6 0.66 2.3E-05 42.4 6.8 65 97-181 357-423 (524)
193 3gre_A Serine/threonine-protei 89.3 1.1 3.9E-05 37.8 7.6 72 95-185 63-141 (437)
194 3jro_A Fusion protein of prote 88.9 1.3 4.6E-05 41.5 8.5 73 95-185 9-85 (753)
195 2oaj_A Protein SNI1; WD40 repe 88.5 1.3 4.4E-05 43.0 8.3 69 94-183 16-85 (902)
196 2ece_A 462AA long hypothetical 88.2 1.9 6.4E-05 39.9 8.7 72 96-172 321-398 (462)
197 3v64_C Agrin; beta propeller, 88.2 7.8 0.00027 32.9 12.3 57 98-172 161-220 (349)
198 3bg1_A Protein SEC13 homolog; 88.0 2.2 7.4E-05 34.9 8.4 33 95-127 13-46 (316)
199 2p4o_A Hypothetical protein; p 87.8 5 0.00017 32.9 10.5 34 92-126 28-63 (306)
200 3gre_A Serine/threonine-protei 87.8 2.8 9.7E-05 35.3 9.1 70 97-183 170-242 (437)
201 2oaj_A Protein SNI1; WD40 repe 87.2 2.6 9E-05 40.8 9.6 75 95-184 575-659 (902)
202 2oit_A Nucleoporin 214KDA; NH2 86.9 4 0.00014 35.8 9.9 70 95-176 192-262 (434)
203 1qks_A Cytochrome CD1 nitrite 86.9 1.4 4.8E-05 40.9 7.2 61 100-180 158-221 (567)
204 3v65_B Low-density lipoprotein 86.8 5.6 0.00019 34.4 10.6 58 97-172 203-263 (386)
205 3jro_A Fusion protein of prote 86.7 3.1 0.00011 38.9 9.6 72 95-184 53-130 (753)
206 2w18_A PALB2, fancn, partner a 86.6 2.8 9.7E-05 37.3 8.7 52 115-184 304-355 (356)
207 2qe8_A Uncharacterized protein 85.1 4.1 0.00014 34.0 8.7 88 96-185 120-223 (343)
208 1npe_A Nidogen, entactin; glyc 85.0 4.9 0.00017 31.9 8.8 36 97-132 37-74 (267)
209 3sjl_D Methylamine dehydrogena 85.0 4.6 0.00016 36.0 9.3 59 88-165 323-384 (386)
210 3sov_A LRP-6, low-density lipo 83.6 4.4 0.00015 34.3 8.3 57 98-172 124-183 (318)
211 3p5b_L Low density lipoprotein 82.8 18 0.00062 31.4 12.1 57 98-172 204-263 (400)
212 3hrp_A Uncharacterized protein 82.7 5.5 0.00019 34.7 8.7 54 98-172 133-188 (409)
213 2ece_A 462AA long hypothetical 82.5 16 0.00056 33.5 12.1 35 98-133 190-245 (462)
214 1q7f_A NHL, brain tumor CG1071 82.3 6 0.0002 31.2 8.2 68 97-183 208-277 (286)
215 1ijq_A LDL receptor, low-densi 81.7 8.9 0.00031 31.9 9.4 57 98-172 122-181 (316)
216 4a9v_A PHOX; hydrolase, beta-p 81.3 4.6 0.00016 38.4 8.1 57 99-174 479-549 (592)
217 2fp8_A Strictosidine synthase; 81.0 5.8 0.0002 32.5 7.9 18 155-172 185-202 (322)
218 1q7f_A NHL, brain tumor CG1071 80.3 7.4 0.00025 30.7 8.0 34 97-132 165-201 (286)
219 1rwi_B Serine/threonine-protei 79.9 6.6 0.00023 30.4 7.5 27 156-183 235-261 (270)
220 3v7d_B Cell division control p 79.7 22 0.00075 29.9 11.3 64 95-177 391-454 (464)
221 3zwu_A Alkaline phosphatase PH 79.7 5.7 0.00019 37.6 8.2 58 99-174 479-549 (592)
222 3qqz_A Putative uncharacterize 78.1 13 0.00044 31.1 9.2 44 91-134 21-67 (255)
223 3no2_A Uncharacterized protein 77.7 12 0.0004 30.6 8.7 35 97-132 38-72 (276)
224 4hw6_A Hypothetical protein, I 77.4 19 0.00066 31.7 10.6 59 97-172 229-290 (433)
225 1xip_A Nucleoporin NUP159; bet 76.4 26 0.0009 30.9 11.2 59 97-182 128-187 (388)
226 1pjx_A Dfpase, DIISOPROPYLFLUO 75.8 6.7 0.00023 31.1 6.5 13 97-109 118-130 (314)
227 1rwi_B Serine/threonine-protei 75.7 10 0.00035 29.3 7.5 53 96-167 67-120 (270)
228 3fvz_A Peptidyl-glycine alpha- 74.8 19 0.00067 29.4 9.4 31 155-186 292-322 (329)
229 3tc9_A Hypothetical hydrolase; 74.8 10 0.00035 33.3 8.1 56 98-172 139-196 (430)
230 2w18_A PALB2, fancn, partner a 74.0 7.9 0.00027 34.4 7.0 60 97-171 180-243 (356)
231 2ovr_B FBW7, F-BOX/WD repeat p 73.9 15 0.00051 31.0 8.6 66 96-177 363-430 (445)
232 3sre_A PON1, serum paraoxonase 73.1 8.7 0.0003 33.7 7.1 30 155-184 221-250 (355)
233 1pjx_A Dfpase, DIISOPROPYLFLUO 72.2 9.4 0.00032 30.2 6.5 37 97-133 19-63 (314)
234 3qqz_A Putative uncharacterize 71.7 42 0.0014 27.8 11.1 115 38-185 28-150 (255)
235 1fwx_A Nitrous oxide reductase 70.1 33 0.0011 32.5 10.7 25 89-114 127-153 (595)
236 3hrp_A Uncharacterized protein 68.1 26 0.0009 30.3 9.0 63 96-172 219-284 (409)
237 3v7d_B Cell division control p 67.2 26 0.00087 29.5 8.6 71 95-185 162-235 (464)
238 3m0c_C LDL receptor, low-densi 67.1 48 0.0017 32.0 11.4 58 97-172 515-575 (791)
239 1n7d_A LDL receptor, low-densi 66.6 5.1 0.00017 37.9 4.3 19 155-173 540-558 (699)
240 3v65_B Low-density lipoprotein 65.1 26 0.00089 30.1 8.3 38 96-133 116-155 (386)
241 3v64_C Agrin; beta propeller, 64.0 40 0.0014 28.4 9.2 38 96-133 73-112 (349)
242 3kya_A Putative phosphatase; s 63.2 20 0.0007 33.0 7.6 27 98-124 249-277 (496)
243 4a0p_A LRP6, LRP-6, low-densit 62.6 73 0.0025 29.6 11.4 37 97-133 38-76 (628)
244 2p4o_A Hypothetical protein; p 62.5 60 0.0021 26.2 9.8 24 157-182 171-194 (306)
245 1xip_A Nucleoporin NUP159; bet 61.4 9.2 0.00031 33.9 4.8 62 96-170 163-229 (388)
246 2iwa_A Glutamine cyclotransfer 61.4 71 0.0024 26.7 10.6 28 102-129 70-99 (266)
247 1fwx_A Nitrous oxide reductase 61.1 11 0.00038 35.8 5.5 30 95-125 276-308 (595)
248 4a0p_A LRP6, LRP-6, low-densit 59.0 83 0.0028 29.2 11.1 57 97-172 124-183 (628)
249 3kya_A Putative phosphatase; s 59.0 43 0.0015 30.8 9.0 59 99-172 142-210 (496)
250 2j04_B YDR362CP, TAU91; beta p 57.4 17 0.00059 32.9 6.0 71 95-184 266-340 (524)
251 1ijq_A LDL receptor, low-densi 57.0 27 0.00093 28.8 6.8 45 109-172 3-47 (316)
252 2ism_A Putative oxidoreductase 56.4 28 0.00097 29.5 6.9 60 104-172 269-331 (352)
253 4hw6_A Hypothetical protein, I 54.9 39 0.0014 29.7 7.8 56 98-174 141-199 (433)
254 3das_A Putative oxidoreductase 53.8 67 0.0023 27.9 9.0 37 96-132 32-69 (347)
255 2qe8_A Uncharacterized protein 52.7 33 0.0011 28.3 6.6 26 98-123 197-224 (343)
256 2ism_A Putative oxidoreductase 52.6 91 0.0031 26.2 9.6 24 97-122 32-57 (352)
257 2iwa_A Glutamine cyclotransfer 49.9 1.1E+02 0.0038 25.4 10.0 35 97-133 22-61 (266)
258 2z2n_A Virginiamycin B lyase; 49.9 84 0.0029 24.0 8.9 29 98-129 185-216 (299)
259 3das_A Putative oxidoreductase 49.7 78 0.0027 27.5 8.8 12 156-167 203-214 (347)
260 2qc5_A Streptogramin B lactona 49.1 85 0.0029 24.0 8.2 34 96-131 146-181 (300)
261 3nol_A Glutamine cyclotransfer 46.6 1.2E+02 0.0039 25.6 9.1 37 97-133 86-125 (262)
262 3q6k_A 43.2 kDa salivary prote 46.0 1.6E+02 0.0054 26.0 14.1 83 96-185 152-252 (381)
263 2qc5_A Streptogramin B lactona 45.5 99 0.0034 23.6 8.1 34 96-131 104-139 (300)
264 1cru_A Protein (soluble quinop 44.4 88 0.003 27.7 8.5 36 97-132 28-64 (454)
265 3sov_A LRP-6, low-density lipo 40.4 1.2E+02 0.0042 25.1 8.4 29 98-126 37-67 (318)
266 3a9g_A Putative uncharacterize 40.4 1.2E+02 0.0042 25.6 8.5 17 156-172 198-214 (354)
267 2z2n_A Virginiamycin B lyase; 40.3 1.2E+02 0.0041 23.1 8.1 36 96-132 15-51 (299)
268 1p22_A F-BOX/WD-repeat protein 40.2 1.1E+02 0.0038 25.5 8.1 31 102-132 138-169 (435)
269 3no2_A Uncharacterized protein 40.1 1.4E+02 0.0047 24.0 8.5 36 97-132 78-115 (276)
270 3a9g_A Putative uncharacterize 36.4 1.6E+02 0.0056 24.8 8.6 24 97-122 30-55 (354)
271 3s94_A LRP-6, low-density lipo 35.9 1.4E+02 0.0047 27.6 8.6 57 98-172 129-188 (619)
272 2g8s_A Glucose/sorbosone dehyd 35.7 1.2E+02 0.004 25.6 7.5 60 115-185 288-351 (353)
273 3p5b_L Low density lipoprotein 35.7 84 0.0029 27.0 6.7 46 108-172 84-129 (400)
274 1dgw_X Canavalin; duplicated s 30.4 53 0.0018 22.6 3.7 27 95-121 45-71 (79)
275 3pbp_A Nucleoporin NUP82; beta 30.1 2.3E+02 0.0079 25.9 8.8 71 99-185 24-94 (452)
276 2xbg_A YCF48-like protein; pho 30.1 1.7E+02 0.0059 24.0 7.5 29 96-124 163-191 (327)
277 1n7d_A LDL receptor, low-densi 27.5 1.2E+02 0.0041 28.4 6.7 34 99-132 543-578 (699)
278 2g8s_A Glucose/sorbosone dehyd 27.0 2E+02 0.0067 24.1 7.5 17 156-172 198-214 (353)
279 3m0c_C LDL receptor, low-densi 26.7 1.8E+02 0.0063 27.9 8.0 35 98-132 473-509 (791)
280 2p9w_A MAL S 1 allergenic prot 26.0 85 0.0029 27.5 5.0 15 157-171 187-201 (334)
281 1cru_A Protein (soluble quinop 24.1 2.2E+02 0.0075 25.1 7.5 12 156-167 229-240 (454)
282 1tl2_A L10, protein (tachylect 23.8 1.6E+02 0.0055 24.7 6.1 29 96-125 41-69 (236)
283 3nok_A Glutaminyl cyclase; bet 22.9 3.4E+02 0.012 22.8 9.5 33 101-133 99-134 (268)
284 3mbr_X Glutamine cyclotransfer 20.7 3.5E+02 0.012 22.2 11.2 33 100-132 67-102 (243)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=2.3e-19 Score=169.29 Aligned_cols=134 Identities=35% Similarity=0.636 Sum_probs=112.1
Q ss_pred EEEeccCcceeEEEEEeeeee-eeeeecCCCCc----cceeecCC-CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCe
Q psy7767 55 YLQRSTDIALKLSIRCLTWKQ-SHSLSGRPDTL----TDVSDLDG-SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSI 128 (200)
Q Consensus 55 y~~~~~~~~~kv~i~~n~~~~-R~s~~a~~~~~----~~v~~lt~-~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~ 128 (200)
|...+.+ ++|++..+..+. ||++.++.+.. .++++++. ...+..++|||||++|||+.+++||+.++++|+.
T Consensus 67 ~~~Spdg--~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 67 YSISPDG--QFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPS 144 (740)
T ss_dssp EEECTTS--SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCC
T ss_pred eEECCCC--CEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCce
Confidence 4444433 467888776666 88888777521 23444554 4567999999999999999999999999999999
Q ss_pred EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeCCC
Q psy7767 129 NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEP 190 (200)
Q Consensus 129 ~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~~~ 190 (200)
+|||.+|....+++|.++|+|+||||+...+++|||||++|||.+.|++.++.+.++.+...
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~ 206 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE 206 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCC
Confidence 99999988777899999999999999999999999999999999999999999999988763
No 2
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.63 E-value=8.6e-16 Score=142.35 Aligned_cols=94 Identities=39% Similarity=0.790 Sum_probs=86.0
Q ss_pred CCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767 96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN 175 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D 175 (200)
..+..++|||||++|||+.+++||+.++++++..++|.++....+++|.++|+++||+++...+++|||||++|||.+.|
T Consensus 110 ~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 110 RPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp SSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred cccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 46789999999999999999999999999999999998887776789999999999988888999999999999999999
Q ss_pred CCcceEEEEEeeCC
Q psy7767 176 DARVHNMSYIHYGE 189 (200)
Q Consensus 176 ~s~v~~~~i~~~~~ 189 (200)
++.++.+.++.+..
T Consensus 190 ~~~~~~~~~~~~~~ 203 (719)
T 1z68_A 190 DTDIPVIAYSYYGD 203 (719)
T ss_dssp CTTSCEEEEEECCS
T ss_pred CCCCceEEeeccCC
Confidence 88889888877765
No 3
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.53 E-value=2.6e-14 Score=131.62 Aligned_cols=91 Identities=40% Similarity=0.781 Sum_probs=81.9
Q ss_pred ceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCC
Q psy7767 98 LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDA 177 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s 177 (200)
+..++|||||++|||+.+++||+.++++++..+++..+...++++|.++|+++||+++...+++|||||++|+|.+.+.+
T Consensus 116 ~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~ 195 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDS 195 (723)
T ss_dssp CSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECT
T ss_pred ccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCC
Confidence 78899999999999999999999999999999999887666678999999999999888899999999999999999888
Q ss_pred cceEEEEEeeC
Q psy7767 178 RVHNMSYIHYG 188 (200)
Q Consensus 178 ~v~~~~i~~~~ 188 (200)
.+..+.++.+.
T Consensus 196 ~~~~~~~~~~~ 206 (723)
T 1xfd_A 196 RVPIMELPTYT 206 (723)
T ss_dssp TSCEEEECCCS
T ss_pred ccceEEeeccC
Confidence 88777765443
No 4
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.19 E-value=6.2e-11 Score=109.28 Aligned_cols=91 Identities=31% Similarity=0.502 Sum_probs=77.5
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCC-----CCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDF-----RSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL 169 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~-----g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L 169 (200)
...+..++|||||+.|||+.+++||+.++++ ++..+++..+... +.+|.+ +++|| ++...+++|||||++|
T Consensus 120 ~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~--~~~ee-~~~~~~~~~SpDg~~l 195 (706)
T 2z3z_A 120 NEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTET-LVYGQA--VHQRE-FGIEKGTFWSPKGSCL 195 (706)
T ss_dssp TTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTT-EEESSC--CGGGC-TTCCCSEEECTTSSEE
T ss_pred cccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCC-eEcccc--hhhhh-cCCCceEEECCCCCEE
Confidence 3567889999999999999999999999998 8899999877554 578888 88888 5788999999999999
Q ss_pred EEEEEcCCcceEEEEEeeCC
Q psy7767 170 AYMKFNDARVHNMSYIHYGE 189 (200)
Q Consensus 170 af~r~D~s~v~~~~i~~~~~ 189 (200)
+|.+.|++.++.+.+..+..
T Consensus 196 a~~~~d~~~~~~~~~~~~~~ 215 (706)
T 2z3z_A 196 AFYRMDQSMVKPTPIVDYHP 215 (706)
T ss_dssp EEEEEECTTSCCEEEEECCS
T ss_pred EEEEECCCCCceEEeeccCC
Confidence 99998888887777665543
No 5
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.18 E-value=6e-11 Score=109.78 Aligned_cols=90 Identities=28% Similarity=0.455 Sum_probs=75.7
Q ss_pred eecCC-CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767 90 SDLDG-SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI 168 (200)
Q Consensus 90 ~~lt~-~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~ 168 (200)
+.++. ...+..++|||||++|||+.+++||+.++++++..+++..+... +.+|.++|+++|| ++...+++|||||++
T Consensus 145 ~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~-~~~g~~~~v~~~~-~~~~~~~~~SpDg~~ 222 (741)
T 2ecf_A 145 RQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTT-IGNGIAEFVADEE-MDRHTGYWWAPDDSA 222 (741)
T ss_dssp CBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSS-EEESCCCHHHHHH-SCCCCSEEECTTSSC
T ss_pred EEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCccc-eeccccceeeeec-cccccceEECCCCCE
Confidence 34443 35678999999999999999999999999999999999876544 5889999999988 677889999999999
Q ss_pred EEEEEEcCCcceE
Q psy7767 169 LAYMKFNDARVHN 181 (200)
Q Consensus 169 Laf~r~D~s~v~~ 181 (200)
|+|...|.+.+..
T Consensus 223 l~~~~~d~~~~~~ 235 (741)
T 2ecf_A 223 IAYARIDESPVPV 235 (741)
T ss_dssp EEEEEEECTTSCE
T ss_pred EEEEEEcCCCCce
Confidence 9999888765443
No 6
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.64 E-value=3.1e-07 Score=76.47 Aligned_cols=60 Identities=18% Similarity=0.268 Sum_probs=48.8
Q ss_pred CCceeeEECcCCCEEEEEEcC------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767 96 NFLQLVQWSPVGHDLIFVKDN------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL 169 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~~g------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L 169 (200)
..+..++|||||++|||+... +||+.++++++..+++..+. ...+.|||||++|
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--------------------~~~~~wspdg~~l 118 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--------------------IRSLEWNEDSRKL 118 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--------------------EEEEEECTTSSEE
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--------------------ccceeECCCCCEE
Confidence 356789999999999999742 49999999988888886431 2367999999999
Q ss_pred EEEEEc
Q psy7767 170 AYMKFN 175 (200)
Q Consensus 170 af~r~D 175 (200)
+|...+
T Consensus 119 ~~~~~~ 124 (347)
T 2gop_A 119 LIVGFK 124 (347)
T ss_dssp EEEEEC
T ss_pred EEEEcc
Confidence 999764
No 7
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.58 E-value=2.6e-07 Score=77.59 Aligned_cols=61 Identities=21% Similarity=0.185 Sum_probs=48.8
Q ss_pred ceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 98 LQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
+..++|||||++|+|+... +||+.++++++..+++..... ....+.|||||++|+|++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~------------------~~~~~~~spdg~~l~~~~ 99 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGD------------------NTFGGFISTDERAFFYVK 99 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCB------------------CTTTCEECTTSSEEEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCC------------------ccccceECCCCCEEEEEE
Confidence 6789999999999999754 799999999988888764321 123478999999999987
Q ss_pred EcC
Q psy7767 174 FND 176 (200)
Q Consensus 174 ~D~ 176 (200)
.+.
T Consensus 100 ~~~ 102 (396)
T 3c5m_A 100 NEL 102 (396)
T ss_dssp TTT
T ss_pred cCC
Confidence 654
No 8
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.55 E-value=7.6e-07 Score=78.44 Aligned_cols=73 Identities=22% Similarity=0.196 Sum_probs=56.5
Q ss_pred CCCceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
...+..++|||||++|||+... .|++.++++++..+++.... ....+.|||||++|+
T Consensus 178 ~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~-------------------~~~~~~~spdg~~la 238 (415)
T 2hqs_A 178 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR-------------------HNGAPAFSPDGSKLA 238 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSS-------------------CEEEEEECTTSSEEE
T ss_pred CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCC-------------------cccCEEEcCCCCEEE
Confidence 4568999999999999999753 89999999988887775332 234789999999999
Q ss_pred EEEEcCCcceEEEEEe
Q psy7767 171 YMKFNDARVHNMSYIH 186 (200)
Q Consensus 171 f~r~D~s~v~~~~i~~ 186 (200)
|....++...++.+..
T Consensus 239 ~~~~~~g~~~i~~~d~ 254 (415)
T 2hqs_A 239 FALSKTGSLNLYVMDL 254 (415)
T ss_dssp EEECTTSSCEEEEEET
T ss_pred EEEecCCCceEEEEEC
Confidence 9876655555555444
No 9
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.54 E-value=2.1e-07 Score=78.50 Aligned_cols=71 Identities=23% Similarity=0.236 Sum_probs=52.5
Q ss_pred cceeecCCCC-C-----ceeeEECcCCCEEEEEEc--C--cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCC
Q psy7767 87 TDVSDLDGSN-F-----LQLVQWSPVGHDLIFVKD--N--NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSS 156 (200)
Q Consensus 87 ~~v~~lt~~~-~-----is~~~wSPDGk~IAFV~~--g--dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~ 156 (200)
..+++++... . +..++|||||++|+|+.. + +||+.++++++.+++|..... .
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~------------------~ 82 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD------------------N 82 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB------------------C
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC------------------C
Confidence 3555665422 2 234899999999999986 2 599999999999999874321 1
Q ss_pred CcceEEccCCCEEEEEEEc
Q psy7767 157 TKTLWFSPDGSILAYMKFN 175 (200)
Q Consensus 157 ~~~~~WSPDGk~Laf~r~D 175 (200)
..++.|||||++|+|...+
T Consensus 83 ~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 83 TFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp SSSCEECTTSSEEEEEETT
T ss_pred ccceEEcCCCCEEEEEeCC
Confidence 2256899999999998744
No 10
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.53 E-value=1.3e-06 Score=76.91 Aligned_cols=75 Identities=21% Similarity=0.177 Sum_probs=57.3
Q ss_pred CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
...+..++|||||+.|+|+.. .+||+.++++++..+++.... ....+.|||||++|+
T Consensus 222 ~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~-------------------~~~~~~~spdg~~l~ 282 (415)
T 2hqs_A 222 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS-------------------NNTEPTWFPDSQNLA 282 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS-------------------CEEEEEECTTSSEEE
T ss_pred CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC-------------------cccceEECCCCCEEE
Confidence 345789999999999999973 359999999888887775432 234689999999999
Q ss_pred EEEEcCCcceEEEEEeeC
Q psy7767 171 YMKFNDARVHNMSYIHYG 188 (200)
Q Consensus 171 f~r~D~s~v~~~~i~~~~ 188 (200)
|...+++...++.+...+
T Consensus 283 ~~s~~~g~~~i~~~d~~~ 300 (415)
T 2hqs_A 283 FTSDQAGRPQVYKVNING 300 (415)
T ss_dssp EEECTTSSCEEEEEETTS
T ss_pred EEECCCCCcEEEEEECCC
Confidence 988666555666555443
No 11
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.50 E-value=6e-07 Score=84.00 Aligned_cols=62 Identities=11% Similarity=0.052 Sum_probs=49.4
Q ss_pred CceeeEECcCCCEEEEEEc--C----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVKD--N----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~--g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
.+..++|||||++|||..+ | +||+.++++|+..+++..+. ...++.|||||+.|+
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-------------------~~~~~~wspDg~~l~ 186 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-------------------KFSCMAWTHDGKGMF 186 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-------------------CSCCEEECTTSSEEE
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-------------------ccceEEEEeCCCEEE
Confidence 3678999999999999964 2 79999999998877654221 235689999999999
Q ss_pred EEEEcCC
Q psy7767 171 YMKFNDA 177 (200)
Q Consensus 171 f~r~D~s 177 (200)
|.+.+..
T Consensus 187 ~~~~~~~ 193 (710)
T 2xdw_A 187 YNAYPQQ 193 (710)
T ss_dssp EEECCCC
T ss_pred EEEECCc
Confidence 9987754
No 12
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.40 E-value=7e-07 Score=80.81 Aligned_cols=67 Identities=9% Similarity=-0.118 Sum_probs=50.4
Q ss_pred eeeEECcCCCEEEEEEc-----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 99 QLVQWSPVGHDLIFVKD-----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 99 s~~~wSPDGk~IAFV~~-----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
..++|||||+.|||+.. +.||+.++++++.++|+.... ...++.|||||++|+ ..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~-------------------~~~~~~~SpDG~~l~-~~ 212 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG-------------------SFSSASISPGMKVTA-GL 212 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSC-------------------EEEEEEECTTSCEEE-EE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCC-------------------ccccceECCCCCEEE-Ec
Confidence 78999999999999863 479999999999888876432 235789999999998 44
Q ss_pred EcCCcceEEEEE
Q psy7767 174 FNDARVHNMSYI 185 (200)
Q Consensus 174 ~D~s~v~~~~i~ 185 (200)
.+++...++.+.
T Consensus 213 ~~~~~~~i~~~d 224 (582)
T 3o4h_A 213 ETAREARLVTVD 224 (582)
T ss_dssp ECSSCEEEEEEC
T ss_pred cCCCeeEEEEEc
Confidence 444433444443
No 13
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.38 E-value=5.7e-07 Score=75.87 Aligned_cols=67 Identities=16% Similarity=0.356 Sum_probs=51.3
Q ss_pred CCCceeeEECc-CCCEEEEEEcC-------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767 95 SNFLQLVQWSP-VGHDLIFVKDN-------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG 166 (200)
Q Consensus 95 ~~~is~~~wSP-DGk~IAFV~~g-------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG 166 (200)
...+..++||| ||++|||+..+ +||+.+++++..++++...... ....+.|||||
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~-----------------~~~~~~~spdg 249 (388)
T 3pe7_A 187 NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGE-----------------SCTHEFWVPDG 249 (388)
T ss_dssp SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTE-----------------EEEEEEECTTS
T ss_pred CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCc-----------------ccccceECCCC
Confidence 34568999999 99999999853 8999999888888888643200 12357899999
Q ss_pred CEEEEEEEcCCc
Q psy7767 167 SILAYMKFNDAR 178 (200)
Q Consensus 167 k~Laf~r~D~s~ 178 (200)
++|+|+..+.+.
T Consensus 250 ~~l~~~~~~~~~ 261 (388)
T 3pe7_A 250 SALVYVSYLKGS 261 (388)
T ss_dssp SCEEEEEEETTC
T ss_pred CEEEEEecCCCC
Confidence 999998766543
No 14
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.38 E-value=3.9e-06 Score=66.38 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=56.5
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCC-CCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDF-RSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~-g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.|++..++.|++.++++ ++..++...... .....+.|||||++|++..
T Consensus 41 ~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----------------~~~~~~~~spdg~~l~~~~ 103 (297)
T 2ojh_A 41 PELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT-----------------ICNNDHGISPDGALYAISD 103 (297)
T ss_dssp SSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCC-----------------CBCSCCEECTTSSEEEEEE
T ss_pred CcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecccccc-----------------ccccceEECCCCCEEEEEE
Confidence 3467889999999999999999999999998 877777643210 1345689999999999987
Q ss_pred EcC-CcceEEEEEe
Q psy7767 174 FND-ARVHNMSYIH 186 (200)
Q Consensus 174 ~D~-s~v~~~~i~~ 186 (200)
.+. ....++.+..
T Consensus 104 ~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 104 KVEFGKSAIYLLPS 117 (297)
T ss_dssp CTTTSSCEEEEEET
T ss_pred eCCCCcceEEEEEC
Confidence 443 3455555543
No 15
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.34 E-value=2.5e-06 Score=79.67 Aligned_cols=63 Identities=21% Similarity=0.103 Sum_probs=46.4
Q ss_pred CceeeEECcCCCEEEEEEc------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVKD------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
.+..++|||||++|||+.. ..|++.++++|+..+ .+... + ....++.|||||+.|+
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~-----~-----------~~~~~~~wspDg~~l~ 183 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIE-----G-----------GKYATPKWTPDSKGFY 183 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBS-----C-----------CTTCCCEECTTSSEEE
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccC-----c-----------ccccceEEecCCCEEE
Confidence 4688999999999999963 369999999887531 11100 0 0125789999999999
Q ss_pred EEEEcCC
Q psy7767 171 YMKFNDA 177 (200)
Q Consensus 171 f~r~D~s 177 (200)
|.+.|..
T Consensus 184 ~~~~d~~ 190 (695)
T 2bkl_A 184 YEWLPTD 190 (695)
T ss_dssp EEECCCC
T ss_pred EEEecCC
Confidence 9988764
No 16
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.34 E-value=9.9e-07 Score=80.56 Aligned_cols=61 Identities=13% Similarity=0.092 Sum_probs=49.1
Q ss_pred CceeeEECcCCCEEEEEEc-----------CcEEEEECCC------CCeEEEe-eCCCcceEecccccceeeeeeeCCCc
Q psy7767 97 FLQLVQWSPVGHDLIFVKD-----------NNLYQAYDDF------RSINALT-RDGIKGVLFNGVADWVYEEEVFSSTK 158 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~-----------gdLyv~~~~~------g~~~rLT-~dg~~~~~~nG~pdwv~eEEi~~~~~ 158 (200)
....++|||||+.|+|+.. .+||+.++++ +..++|+ .... ...
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~-------------------~~~ 191 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHR-------------------FVT 191 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSS-------------------EEC
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCC-------------------ccc
Confidence 4578999999999999975 3799999998 7778887 4321 234
Q ss_pred ceEEccCCCEEEEEEEcC
Q psy7767 159 TLWFSPDGSILAYMKFND 176 (200)
Q Consensus 159 ~~~WSPDGk~Laf~r~D~ 176 (200)
++.|||||++|+|...+.
T Consensus 192 ~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 192 GPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp CCEECTTSSEEEEEEECT
T ss_pred CceECCCCCEEEEEECCC
Confidence 678999999999998765
No 17
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.32 E-value=1.3e-06 Score=80.66 Aligned_cols=59 Identities=22% Similarity=0.311 Sum_probs=48.9
Q ss_pred CceeeEECcCCCEEEEEEcCcEEEEECCCC---CeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVKDNNLYQAYDDFR---SINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~gdLyv~~~~~g---~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
.+..++|||||+.|+|..++.||+.+++++ ...+++..+. ....+.|||||++|||.+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~-------------------~~~~~~~SPDG~~la~~~ 170 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEG-------------------FATDAKLSPKGGFVSFIR 170 (741)
T ss_dssp ESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSS-------------------CEEEEEECTTSSEEEEEE
T ss_pred CcceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCc-------------------ccccccCCCCCCEEEEEe
Confidence 368899999999999999999999999988 6667765332 234689999999999986
Q ss_pred E
Q psy7767 174 F 174 (200)
Q Consensus 174 ~ 174 (200)
.
T Consensus 171 ~ 171 (741)
T 2ecf_A 171 G 171 (741)
T ss_dssp T
T ss_pred C
Confidence 3
No 18
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.30 E-value=2.7e-06 Score=83.14 Aligned_cols=85 Identities=16% Similarity=0.091 Sum_probs=57.5
Q ss_pred eecCC-CCCceeeEECcCCCEEEEEEcC-------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceE
Q psy7767 90 SDLDG-SNFLQLVQWSPVGHDLIFVKDN-------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLW 161 (200)
Q Consensus 90 ~~lt~-~~~is~~~wSPDGk~IAFV~~g-------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~ 161 (200)
++++. ...+..++|||||++|||+... +||+.++++++.++|+..+.. .++. +.....+.
T Consensus 46 ~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~---~~~~---------~~~~~~~~ 113 (1045)
T 1k32_A 46 RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGK---STGR---------RMFTDVAG 113 (1045)
T ss_dssp EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEE---EETT---------EECSEEEE
T ss_pred EEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCc---cccc---------cccccccc
Confidence 34443 3567999999999999999642 799999999998888875421 0111 01235789
Q ss_pred EccCCCEEEEEEEcC----CcceEEEEEee
Q psy7767 162 FSPDGSILAYMKFND----ARVHNMSYIHY 187 (200)
Q Consensus 162 WSPDGk~Laf~r~D~----s~v~~~~i~~~ 187 (200)
|||||+ |+|....+ ....++.+...
T Consensus 114 ~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~ 142 (1045)
T 1k32_A 114 FDPDGN-LIISTDAMQPFSSMTCLYRVEND 142 (1045)
T ss_dssp ECTTCC-EEEEECTTSSSTTCCEEEEEEGG
T ss_pred CCCCCE-EEEEECCcCCCcccceEEEEECC
Confidence 999998 88886543 23445555443
No 19
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.29 E-value=5.6e-07 Score=84.75 Aligned_cols=56 Identities=21% Similarity=0.131 Sum_probs=46.6
Q ss_pred eeeEECcCCCEEEEEEc----------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767 99 QLVQWSPVGHDLIFVKD----------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI 168 (200)
Q Consensus 99 s~~~wSPDGk~IAFV~~----------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~ 168 (200)
.+++|||||+.|+|..+ +++|+.++++++..+|+.... ....+.|||||++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~-------------------~~~~~~~SPdG~~ 125 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPN-------------------NTQWVTWSPVGHK 125 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCT-------------------TEEEEEECSSTTC
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCC-------------------cceeeEECCCCCE
Confidence 45899999999999987 689999999998887775332 2346899999999
Q ss_pred EEEEE
Q psy7767 169 LAYMK 173 (200)
Q Consensus 169 Laf~r 173 (200)
|||++
T Consensus 126 la~~~ 130 (740)
T 4a5s_A 126 LAYVW 130 (740)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99985
No 20
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.28 E-value=8.9e-06 Score=64.26 Aligned_cols=72 Identities=17% Similarity=0.053 Sum_probs=55.4
Q ss_pred CCceeeEECcCCCEEEEEE-----cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 96 NFLQLVQWSPVGHDLIFVK-----DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~-----~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
..+..++|||||+.|++.. ...||..+++++...+++.... ...+.|||||++|+
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------------------~~~~~~spdg~~l~ 144 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP--------------------SYWHGWSPDGKSFT 144 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS--------------------EEEEEECTTSSEEE
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC--------------------ccceEECCCCCEEE
Confidence 4568899999999999998 3589999988887777665321 23578999999999
Q ss_pred EEEEcCCcceEEEEEee
Q psy7767 171 YMKFNDARVHNMSYIHY 187 (200)
Q Consensus 171 f~r~D~s~v~~~~i~~~ 187 (200)
|....++.+.++.+...
T Consensus 145 ~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 145 YCGIRDQVFDIYSMDID 161 (297)
T ss_dssp EEEEETTEEEEEEEETT
T ss_pred EEECCCCceEEEEEECC
Confidence 98777666666666543
No 21
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.18 E-value=1.3e-05 Score=73.22 Aligned_cols=80 Identities=18% Similarity=0.123 Sum_probs=55.4
Q ss_pred ceeecC-C-CCCceeeEECcCCCEEEEEEc---------CcEEEEECC-CC---CeEEEeeCCCcceEecccccceeeee
Q psy7767 88 DVSDLD-G-SNFLQLVQWSPVGHDLIFVKD---------NNLYQAYDD-FR---SINALTRDGIKGVLFNGVADWVYEEE 152 (200)
Q Consensus 88 ~v~~lt-~-~~~is~~~wSPDGk~IAFV~~---------gdLyv~~~~-~g---~~~rLT~dg~~~~~~nG~pdwv~eEE 152 (200)
.++.++ . ......++|||||++|||+.. .+||+.+++ +| +.++++....
T Consensus 178 ~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~---------------- 241 (662)
T 3azo_A 178 AVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE---------------- 241 (662)
T ss_dssp GSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT----------------
T ss_pred ceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC----------------
Confidence 445555 4 345678999999999999973 379999998 46 5666765321
Q ss_pred eeCCCcceEEccCCCEEEEEEEcCCcceEEEEEe
Q psy7767 153 VFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIH 186 (200)
Q Consensus 153 i~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~ 186 (200)
+....+.|||||+ |+|+...++...++.+..
T Consensus 242 --~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 242 --EAIAQAEWAPDGS-LIVATDRTGWWNLHRVDP 272 (662)
T ss_dssp --BCEEEEEECTTSC-EEEEECTTSSCEEEEECT
T ss_pred --ceEcceEECCCCe-EEEEECCCCCeEEEEEEC
Confidence 1234689999999 888876555455555543
No 22
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.17 E-value=7.2e-06 Score=68.16 Aligned_cols=56 Identities=20% Similarity=0.285 Sum_probs=45.4
Q ss_pred CCceeeEECcCCCEEEEEE----------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767 96 NFLQLVQWSPVGHDLIFVK----------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD 165 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~----------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD 165 (200)
..+..+++ ||++|||+. .++||+.++++++.++| . ....+.||||
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~----------------------~~~~~~~SpD 69 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-E----------------------NATMPRISPD 69 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-E----------------------SCEEEEECTT
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-c----------------------cCCCeEECCC
Confidence 45688889 999999995 34799999998888777 1 2346899999
Q ss_pred CCEEEEEEEcC
Q psy7767 166 GSILAYMKFND 176 (200)
Q Consensus 166 Gk~Laf~r~D~ 176 (200)
|++|||++.+.
T Consensus 70 g~~la~~~~~~ 80 (347)
T 2gop_A 70 GKKIAFMRANE 80 (347)
T ss_dssp SSEEEEEEEET
T ss_pred CCEEEEEEecc
Confidence 99999998764
No 23
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.15 E-value=3.1e-06 Score=77.73 Aligned_cols=62 Identities=11% Similarity=0.061 Sum_probs=49.3
Q ss_pred CceeeEECcCCCEEEEEEc----------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767 97 FLQLVQWSPVGHDLIFVKD----------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG 166 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~----------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG 166 (200)
.+..++|||||++|||..+ ++||+.++++++.++++...... .....+.|||||
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~----------------~~~~~~~~SPdG 125 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN----------------AKLQYAGWGPKG 125 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCS----------------CCCSBCCBCSST
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccc----------------ccccccEECCCC
Confidence 3789999999999999975 68999999998887777643210 124568999999
Q ss_pred CEEEEEEE
Q psy7767 167 SILAYMKF 174 (200)
Q Consensus 167 k~Laf~r~ 174 (200)
++|||++.
T Consensus 126 ~~la~~~~ 133 (723)
T 1xfd_A 126 QQLIFIFE 133 (723)
T ss_dssp TCEEEEET
T ss_pred CEEEEEEC
Confidence 99999864
No 24
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.13 E-value=2.1e-06 Score=79.32 Aligned_cols=55 Identities=27% Similarity=0.240 Sum_probs=44.8
Q ss_pred CceeeEECcCCCEEEEEEc----------CcEEEEECCCCCe---EEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767 97 FLQLVQWSPVGHDLIFVKD----------NNLYQAYDDFRSI---NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS 163 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~----------gdLyv~~~~~g~~---~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS 163 (200)
.+..++|||||+.|||..+ +.|++.++++++. .+++. ....+.||
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~----------------------~~~~~~~S 118 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPR----------------------PIQYLCWS 118 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCS----------------------SBCCEEEC
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCc----------------------ccccceEC
Confidence 3788999999999999975 7899999998876 44431 23468999
Q ss_pred cCCCEEEEEE
Q psy7767 164 PDGSILAYMK 173 (200)
Q Consensus 164 PDGk~Laf~r 173 (200)
|||++|||++
T Consensus 119 PDG~~la~~~ 128 (719)
T 1z68_A 119 PVGSKLAYVY 128 (719)
T ss_dssp SSTTCEEEEE
T ss_pred CCCCEEEEEE
Confidence 9999999985
No 25
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.13 E-value=2.4e-05 Score=65.47 Aligned_cols=81 Identities=12% Similarity=-0.010 Sum_probs=55.0
Q ss_pred eEECc-CCCEEEEEE-----------------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEE
Q psy7767 101 VQWSP-VGHDLIFVK-----------------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF 162 (200)
Q Consensus 101 ~~wSP-DGk~IAFV~-----------------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W 162 (200)
+.||| ||+.|++.. +.+||+.+++++..++|+........+.+.. ......+.|
T Consensus 287 ~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~ 358 (396)
T 3c5m_A 287 HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDR--------QITHPHPSF 358 (396)
T ss_dssp EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBS--------STTCCCCEE
T ss_pred CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccc--------cCCCCCceE
Confidence 89999 999888854 2589999999888888876432000000000 012456789
Q ss_pred ccCCCEEEEEEEcCCcceEEEEEeeCC
Q psy7767 163 SPDGSILAYMKFNDARVHNMSYIHYGE 189 (200)
Q Consensus 163 SPDGk~Laf~r~D~s~v~~~~i~~~~~ 189 (200)
||||++|+|...+.+...+|.+....+
T Consensus 359 s~dg~~l~~~s~~~~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 359 TPNDDGVLFTSDFEGVPAIYIADVPES 385 (396)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred ccCCCeEEEEecCCCCceEEEEEEccc
Confidence 999999999987766677777665554
No 26
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.09 E-value=1.1e-05 Score=76.16 Aligned_cols=61 Identities=15% Similarity=0.000 Sum_probs=46.9
Q ss_pred CceeeEECcCCCEEEEEEc--C----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVKD--N----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~--g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
.+..++|||||++|||..+ | +||+.++++|+..+.+..+. ...++.|||| +.|+
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~-------------------~~~~~~wspD-~~l~ 223 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWV-------------------KFSGLAWLGN-DALL 223 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEE-------------------ESCCCEESTT-SEEE
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCc-------------------eeccEEEECC-CEEE
Confidence 4688999999999999974 2 69999999988765432110 1246899999 9999
Q ss_pred EEEEcCC
Q psy7767 171 YMKFNDA 177 (200)
Q Consensus 171 f~r~D~s 177 (200)
|.+.+..
T Consensus 224 ~~~~~~~ 230 (741)
T 1yr2_A 224 YSRFAEP 230 (741)
T ss_dssp EEECCCC
T ss_pred EEEecCc
Confidence 9987654
No 27
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.02 E-value=1.9e-05 Score=77.22 Aligned_cols=71 Identities=18% Similarity=0.131 Sum_probs=55.4
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
...+..++||| ++|||+..++||+.++++++.++|+.... ....+.|||||++|||...
T Consensus 14 ~~~~~~~~~S~--~~iaf~~~~~l~~~~~~gg~~~~lt~~~~-------------------~v~~~~~SPDG~~la~~s~ 72 (1045)
T 1k32_A 14 PNLLLNPDIHG--DRIIFVCCDDLWEHDLKSGSTRKIVSNLG-------------------VINNARFFPDGRKIAIRVM 72 (1045)
T ss_dssp CCCCEEEEEET--TEEEEEETTEEEEEETTTCCEEEEECSSS-------------------EEEEEEECTTSSEEEEEEE
T ss_pred cceEeCcEEeC--CEEEEEECCcEEEEECCCCcEEEeeeCCC-------------------cccCeEECCCCCEEEEEEe
Confidence 34678999995 69999999999999999999999986432 2357899999999999987
Q ss_pred c---CCcceEEEEEe
Q psy7767 175 N---DARVHNMSYIH 186 (200)
Q Consensus 175 D---~s~v~~~~i~~ 186 (200)
+ .+...++.+..
T Consensus 73 ~~~~~~~~~i~~~d~ 87 (1045)
T 1k32_A 73 RGSSLNTADLYFYNG 87 (1045)
T ss_dssp ESTTCCEEEEEEEET
T ss_pred eccCCCCCeEEEEEC
Confidence 6 34444444443
No 28
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.97 E-value=1.9e-05 Score=75.47 Aligned_cols=61 Identities=15% Similarity=0.146 Sum_probs=45.3
Q ss_pred CceeeEEC-cCCCEEEEEEcC------cEEEEECCCC-CeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767 97 FLQLVQWS-PVGHDLIFVKDN------NLYQAYDDFR-SINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI 168 (200)
Q Consensus 97 ~is~~~wS-PDGk~IAFV~~g------dLyv~~~~~g-~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~ 168 (200)
.+..++|| |||++|||+.+. .||+.++++| +. ++ +.- . ....++.|||||+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~-~~~----~-------------~~~~~~~WspDg~~ 234 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IA-DKV----S-------------GTNGEIVWGPDHTS 234 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CC-CCE----E-------------EECSCCEECSSTTE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CC-ccc----c-------------CceeeEEEecCCCE
Confidence 35789999 999999999753 3999999988 52 21 110 0 02346899999999
Q ss_pred EEEEEEcCC
Q psy7767 169 LAYMKFNDA 177 (200)
Q Consensus 169 Laf~r~D~s 177 (200)
|+|++.+++
T Consensus 235 l~y~~~d~~ 243 (751)
T 2xe4_A 235 LFYVTKDET 243 (751)
T ss_dssp EEEEEECTT
T ss_pred EEEEEECCC
Confidence 999998764
No 29
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.91 E-value=9.9e-05 Score=67.81 Aligned_cols=72 Identities=17% Similarity=0.160 Sum_probs=51.9
Q ss_pred eeecCCC-CCcee-eEECcCCCEEEEEEcC------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcce
Q psy7767 89 VSDLDGS-NFLQL-VQWSPVGHDLIFVKDN------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTL 160 (200)
Q Consensus 89 v~~lt~~-~~is~-~~wSPDGk~IAFV~~g------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~ 160 (200)
++.++.+ ..+.. +.|||||+.|+|.... .||..+++++..++++..+. ...+
T Consensus 347 ~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~--------------------~~~~ 406 (706)
T 2z3z_A 347 IRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESG--------------------MHRT 406 (706)
T ss_dssp EEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSS--------------------EEEE
T ss_pred EEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCc--------------------eEEE
Confidence 4445543 33444 7999999999999743 79999998888888875321 2357
Q ss_pred EEccCCCEEEEEEEcCCcce
Q psy7767 161 WFSPDGSILAYMKFNDARVH 180 (200)
Q Consensus 161 ~WSPDGk~Laf~r~D~s~v~ 180 (200)
.|||||++|++...+....+
T Consensus 407 ~~spdg~~l~~~~~~~~~p~ 426 (706)
T 2z3z_A 407 QLSPDGSAIIDIFQSPTVPR 426 (706)
T ss_dssp EECTTSSEEEEEEECSSCSC
T ss_pred EECCCCCEEEEEecCCCCCc
Confidence 99999999999866554333
No 30
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.90 E-value=3.4e-05 Score=69.71 Aligned_cols=85 Identities=15% Similarity=0.044 Sum_probs=53.0
Q ss_pred ceeecCC-CCCceeeEECcCCCEEEEEE-cC--cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767 88 DVSDLDG-SNFLQLVQWSPVGHDLIFVK-DN--NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS 163 (200)
Q Consensus 88 ~v~~lt~-~~~is~~~wSPDGk~IAFV~-~g--dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS 163 (200)
+++.++. ......++|||||+.|+... ++ .||+.++++++.. ++......+ .+. .. .......||
T Consensus 186 ~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~--~~~----~~----~~~~~~~~s 254 (582)
T 3o4h_A 186 GLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDF--SSY----RP----TAITWLGYL 254 (582)
T ss_dssp CCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHH--HHH----CC----SEEEEEEEC
T ss_pred CceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcCh--hhh----hh----ccccceeEc
Confidence 4445554 34468999999999999433 34 7999999988877 554332110 000 00 001123499
Q ss_pred cCCCEEEEEEEcCCcceEEEE
Q psy7767 164 PDGSILAYMKFNDARVHNMSY 184 (200)
Q Consensus 164 PDGk~Laf~r~D~s~v~~~~i 184 (200)
||| +|+|...+++.+..+.+
T Consensus 255 pdg-~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 255 PDG-RLAVVARREGRSAVFID 274 (582)
T ss_dssp TTS-CEEEEEEETTEEEEEET
T ss_pred CCC-cEEEEEEcCCcEEEEEE
Confidence 999 78888777776666654
No 31
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.88 E-value=8.9e-05 Score=69.65 Aligned_cols=94 Identities=10% Similarity=0.069 Sum_probs=60.5
Q ss_pred EEeccCcceeEEEEEeeeeeeeeeecCCCCccceeecCCC--CCceeeEECcCCCEEEEEEc--C----cEEEEECCCCC
Q psy7767 56 LQRSTDIALKLSIRCLTWKQSHSLSGRPDTLTDVSDLDGS--NFLQLVQWSPVGHDLIFVKD--N----NLYQAYDDFRS 127 (200)
Q Consensus 56 ~~~~~~~~~kv~i~~n~~~~R~s~~a~~~~~~~v~~lt~~--~~is~~~wSPDGk~IAFV~~--g----dLyv~~~~~g~ 127 (200)
+-..++.++.+.++-..++. .-.+-+...+..+ ..+..++|||||++|||+.+ | .|++.++++|+
T Consensus 94 ~~~~~~~~~~~~~r~~~~~~-------~~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~ 166 (693)
T 3iuj_A 94 FKNDGLQNQNVLWRQQEGKP-------AEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ 166 (693)
T ss_dssp EEECSSCSSCEEEEECTTSC-------CEEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS
T ss_pred EEEcCCCceeEEEEeCCCCC-------cEEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC
Confidence 44467788878887432111 0001122222211 24678899999999999973 2 69999999998
Q ss_pred eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcC
Q psy7767 128 INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFND 176 (200)
Q Consensus 128 ~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~ 176 (200)
..+.+..+. ...++.|| ||+.|+|.+.+.
T Consensus 167 ~~~~~~~~~-------------------k~~~~~Ws-Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 167 PLETPLKDV-------------------KFSGISWL-GNEGFFYSSYDK 195 (693)
T ss_dssp EEEEEEEEE-------------------ESCCCEEE-TTTEEEEEESSC
T ss_pred CCccccCCc-------------------eeccEEEe-CCCEEEEEEecC
Confidence 765543211 23568999 999999998874
No 32
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.73 E-value=0.00021 Score=66.69 Aligned_cols=70 Identities=9% Similarity=0.008 Sum_probs=48.0
Q ss_pred eeeEECcCCCEEEEEEcC--------------cEEEEECCCCCe--EEEeeCCCcceEecccccceeeeeeeCCCcceEE
Q psy7767 99 QLVQWSPVGHDLIFVKDN--------------NLYQAYDDFRSI--NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF 162 (200)
Q Consensus 99 s~~~wSPDGk~IAFV~~g--------------dLyv~~~~~g~~--~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W 162 (200)
..++|||||+.|+|+... +||+.++.++.. +.+...... + ....++.|
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~-------~---------~~~~~~~~ 234 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD-------P---------TTFLQSDL 234 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC-------T---------TCEEEEEE
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC-------C---------EEEEEEEE
Confidence 789999999999999752 399999987763 334332110 0 02346789
Q ss_pred ccCCCEEEEEEEcC-CcceEEEE
Q psy7767 163 SPDGSILAYMKFND-ARVHNMSY 184 (200)
Q Consensus 163 SPDGk~Laf~r~D~-s~v~~~~i 184 (200)
||||++|+|.+.+. ....++.+
T Consensus 235 SpDG~~l~~~~~~~~~~~~l~~~ 257 (695)
T 2bkl_A 235 SRDGKYLFVYILRGWSENDVYWK 257 (695)
T ss_dssp CTTSCCEEEEEEETTTEEEEEEE
T ss_pred CCCCCEEEEEEeCCCCceEEEEE
Confidence 99999999998776 33344443
No 33
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.62 E-value=0.00032 Score=65.47 Aligned_cols=74 Identities=9% Similarity=-0.031 Sum_probs=47.6
Q ss_pred ceeeEECcCCCEEEEEEcC-----------------cEEEEECCCCCe--EEEeeCCCcceEecccccceeeeeeeCCCc
Q psy7767 98 LQLVQWSPVGHDLIFVKDN-----------------NLYQAYDDFRSI--NALTRDGIKGVLFNGVADWVYEEEVFSSTK 158 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~~g-----------------dLyv~~~~~g~~--~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~ 158 (200)
+..++|||||+.|+|++.. +||+.++.++.. +.+...+.. +. ...
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~-------~~---------~~~ 236 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE-------PK---------WMG 236 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC-------TT---------CEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC-------Ce---------EEE
Confidence 5789999999999999742 299998876653 223222110 00 123
Q ss_pred ceEEccCCCEEEEEEEcCC--cceEEEEEee
Q psy7767 159 TLWFSPDGSILAYMKFNDA--RVHNMSYIHY 187 (200)
Q Consensus 159 ~~~WSPDGk~Laf~r~D~s--~v~~~~i~~~ 187 (200)
++.|||||++|+|...+.. ...++.+...
T Consensus 237 ~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 237 GAELSDDGRYVLLSIREGCDPVNRLWYCDLQ 267 (710)
T ss_dssp EEEECTTSCEEEEEEECSSSSCCEEEEEEGG
T ss_pred EEEEcCCCCEEEEEEEccCCCccEEEEEECc
Confidence 6789999999999876443 2344444433
No 34
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.60 E-value=0.0003 Score=60.44 Aligned_cols=75 Identities=12% Similarity=0.061 Sum_probs=54.2
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.||... ++.|.+.++.+++..+-...|-. +....+.|||||++||= .
T Consensus 269 ~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~-----------------~~V~~v~fSpdg~~laS-~ 330 (365)
T 4h5i_A 269 FKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHS-----------------FAITEVTISPDSTYVAS-V 330 (365)
T ss_dssp CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSS-----------------SCEEEEEECTTSCEEEE-E
T ss_pred CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCccc-----------------CCEEEEEECCCCCEEEE-E
Confidence 45678999999999999876 56899999987765432222210 12357899999999874 4
Q ss_pred EcCCcceEEEEEee
Q psy7767 174 FNDARVHNMSYIHY 187 (200)
Q Consensus 174 ~D~s~v~~~~i~~~ 187 (200)
..++.+.++.++..
T Consensus 331 S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 331 SAANTIHIIKLPLN 344 (365)
T ss_dssp ETTSEEEEEECCTT
T ss_pred eCCCeEEEEEcCCC
Confidence 55677999888644
No 35
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.55 E-value=0.00081 Score=55.08 Aligned_cols=74 Identities=14% Similarity=0.041 Sum_probs=51.2
Q ss_pred cCCCCCcee-eEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767 92 LDGSNFLQL-VQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG 166 (200)
Q Consensus 92 lt~~~~is~-~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG 166 (200)
+..+..... ++|||||+.|+...++ .|++.++++++..+....+. ....+.|||||
T Consensus 79 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-------------------~~~~~~~spdg 139 (331)
T 3u4y_A 79 IQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-------------------DAVGIAISPNG 139 (331)
T ss_dssp EEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-------------------TEEEEEECTTS
T ss_pred cccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-------------------CccceEECCCC
Confidence 334445556 9999999999833333 79999998887765554332 23478999999
Q ss_pred CEEEEEEEcCCc-ceEEEE
Q psy7767 167 SILAYMKFNDAR-VHNMSY 184 (200)
Q Consensus 167 k~Laf~r~D~s~-v~~~~i 184 (200)
++|+....+... +..|.+
T Consensus 140 ~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 140 NGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp SCEEEEEETTTTEEEEEEE
T ss_pred CEEEEEecCCCceEEEEEE
Confidence 988766565555 665554
No 36
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.50 E-value=0.00028 Score=58.70 Aligned_cols=74 Identities=8% Similarity=-0.025 Sum_probs=50.4
Q ss_pred CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
......++|||||+ |+++.. +.|++.++++++.+++..-.. . ......+.|||||++|+
T Consensus 39 ~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~-----~-----------~~~p~~~a~spdg~~l~ 101 (347)
T 3hfq_A 39 TQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA-----P-----------GTPPAYVAVDEARQLVY 101 (347)
T ss_dssp CSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEE-----E-----------SCCCSEEEEETTTTEEE
T ss_pred cCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeec-----C-----------CCCCEEEEECCCCCEEE
Confidence 34567899999999 666653 589999987777666654110 0 02456789999999887
Q ss_pred EEEEcCCcceEEEEE
Q psy7767 171 YMKFNDARVHNMSYI 185 (200)
Q Consensus 171 f~r~D~s~v~~~~i~ 185 (200)
....+++.+..+.+.
T Consensus 102 ~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 102 SANYHKGTAEVMKIA 116 (347)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEeCCCCEEEEEEeC
Confidence 665455666666653
No 37
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.50 E-value=0.00033 Score=66.86 Aligned_cols=73 Identities=11% Similarity=0.055 Sum_probs=49.0
Q ss_pred ceeeEECcCCCEEEEEEc------CcEEEEECCCCCe--EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767 98 LQLVQWSPVGHDLIFVKD------NNLYQAYDDFRSI--NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL 169 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~~------gdLyv~~~~~g~~--~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L 169 (200)
...++|||||+.|+|++. .+||+.++.++.. +.+....... ...++.|||||++|
T Consensus 223 ~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~-----------------~~~~~~~SpDg~~l 285 (751)
T 2xe4_A 223 NGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPL-----------------FSAFMYKAADTNTL 285 (751)
T ss_dssp CSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTT-----------------CEEEEEECTTSSEE
T ss_pred eeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCc-----------------eEEEEEECCCCCEE
Confidence 357899999999999974 2699998877642 2333211100 12357899999999
Q ss_pred EEEEEcCCcceEEEEEee
Q psy7767 170 AYMKFNDARVHNMSYIHY 187 (200)
Q Consensus 170 af~r~D~s~v~~~~i~~~ 187 (200)
+|...+.....++.++..
T Consensus 286 ~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 286 CIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp EEEEECSSCEEEEEEESS
T ss_pred EEEecCCCCceEEEEECC
Confidence 999866554455544443
No 38
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.50 E-value=0.0011 Score=56.36 Aligned_cols=72 Identities=18% Similarity=0.174 Sum_probs=53.5
Q ss_pred CCCCceeeEECcCCCEEEEEEc----------------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCC
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVKD----------------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSST 157 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~~----------------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~ 157 (200)
....+..++|+|||+.|+.... |.|++.++.+++..+....+. ..
T Consensus 343 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~-------------------~~ 403 (433)
T 3bws_A 343 VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN-------------------QP 403 (433)
T ss_dssp CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSS-------------------SE
T ss_pred CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCC-------------------CC
Confidence 4566789999999999988865 389999998877665544321 23
Q ss_pred cceEEccCCCEEEEEEEcCCcceEEEE
Q psy7767 158 KTLWFSPDGSILAYMKFNDARVHNMSY 184 (200)
Q Consensus 158 ~~~~WSPDGk~Laf~r~D~s~v~~~~i 184 (200)
.++.|||||+.|+....+++.+..+.+
T Consensus 404 ~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 404 TGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp EEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred ceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 578999999998766555677777765
No 39
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.44 E-value=0.0011 Score=55.50 Aligned_cols=70 Identities=16% Similarity=0.135 Sum_probs=50.4
Q ss_pred CCCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY 171 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf 171 (200)
....+..++|||||+.|+++. ++.|.+.++.+++..+....+. ....+.|||||++|++
T Consensus 30 ~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-------------------~v~~~~~spdg~~l~~ 90 (391)
T 1l0q_A 30 VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-------------------SPQGVAVSPDGKQVYV 90 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-------------------SEEEEEECTTSSEEEE
T ss_pred cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-------------------CccceEECCCCCEEEE
Confidence 345678999999999997774 6789999998877655444322 2346889999999987
Q ss_pred EEEcCCcceEE
Q psy7767 172 MKFNDARVHNM 182 (200)
Q Consensus 172 ~r~D~s~v~~~ 182 (200)
...+++.+..+
T Consensus 91 ~~~~~~~v~v~ 101 (391)
T 1l0q_A 91 TNMASSTLSVI 101 (391)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCEEEEE
Confidence 75555544443
No 40
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.43 E-value=0.00075 Score=56.55 Aligned_cols=78 Identities=9% Similarity=0.010 Sum_probs=49.3
Q ss_pred CCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
+.....++|||||+.|+.+. ++.|.+.+++++....+..-... ..+ +....++.|||||++|+..
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~---~~~----------~~~~~~i~~spdg~~l~v~ 276 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD---TVN----------AQGSGDIHLSPDGKYLYAS 276 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC---SSC----------CCCEEEEEECTTSSEEEEE
T ss_pred CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC---CCC----------CCCcccEEECCCCCEEEEE
Confidence 45567899999999988776 46788888876655433321100 000 1123578999999988655
Q ss_pred EEc-CCcceEEEEE
Q psy7767 173 KFN-DARVHNMSYI 185 (200)
Q Consensus 173 r~D-~s~v~~~~i~ 185 (200)
..+ ...+.+|.+.
T Consensus 277 ~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 277 NRLKADGVAIFKVD 290 (361)
T ss_dssp ECSSSCEEEEEEEC
T ss_pred CCCCCCEEEEEEEc
Confidence 444 4556666653
No 41
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.40 E-value=0.0019 Score=54.17 Aligned_cols=70 Identities=23% Similarity=0.221 Sum_probs=51.0
Q ss_pred CCCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY 171 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf 171 (200)
.+..+..++|||||+.|++.. ++.|++.++.+++..+....+. ....+.|||||+.|++
T Consensus 72 ~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-------------------~~~~~~~s~dg~~l~~ 132 (391)
T 1l0q_A 72 AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-------------------SPLGLALSPDGKKLYV 132 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-------------------SEEEEEECTTSSEEEE
T ss_pred CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-------------------CcceEEECCCCCEEEE
Confidence 345788999999999998886 3689999998887765554332 2346899999998877
Q ss_pred EEEcCCcceEE
Q psy7767 172 MKFNDARVHNM 182 (200)
Q Consensus 172 ~r~D~s~v~~~ 182 (200)
...+++.+..+
T Consensus 133 ~~~~~~~v~~~ 143 (391)
T 1l0q_A 133 TNNGDKTVSVI 143 (391)
T ss_dssp EETTTTEEEEE
T ss_pred EeCCCCEEEEE
Confidence 76555444433
No 42
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.38 E-value=0.002 Score=52.24 Aligned_cols=74 Identities=11% Similarity=-0.012 Sum_probs=50.7
Q ss_pred CCCCceeeEECcCCCEEEEEEc--CcEEEEECC--CCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVKD--NNLYQAYDD--FRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL 169 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~~--gdLyv~~~~--~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L 169 (200)
.......++|||||+.|+++.. +.|.+.+++ +++...+..-.. + +....+.|||||++|
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~------~-----------~~~~~~~~s~dg~~l 98 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL------P-----------GSLTHISTDHQGQFV 98 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC------S-----------SCCSEEEECTTSSEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc------C-----------CCCcEEEEcCCCCEE
Confidence 3456778999999999988876 678877766 566554443110 0 134578999999988
Q ss_pred EEEEEcCCcceEEEE
Q psy7767 170 AYMKFNDARVHNMSY 184 (200)
Q Consensus 170 af~r~D~s~v~~~~i 184 (200)
++...+++.+..+.+
T Consensus 99 ~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 99 FVGSYNAGNVSVTRL 113 (343)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEEecCCCeEEEEEC
Confidence 766555566666665
No 43
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.33 E-value=0.0024 Score=51.69 Aligned_cols=57 Identities=19% Similarity=0.064 Sum_probs=42.9
Q ss_pred CceeeEECcCCCEEEEEE-------------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767 97 FLQLVQWSPVGHDLIFVK-------------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS 163 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~-------------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS 163 (200)
....++|||||+.|++.. ++.|++.++++++..+....+. ....+.||
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-------------------~~~~~~~s 143 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR-------------------QITMLAWA 143 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS-------------------SCCCEEEC
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC-------------------CcceeEEC
Confidence 567889999999998884 4789999998776654443332 34567899
Q ss_pred cCCCEEEEE
Q psy7767 164 PDGSILAYM 172 (200)
Q Consensus 164 PDGk~Laf~ 172 (200)
|||++|++.
T Consensus 144 ~dg~~l~~~ 152 (337)
T 1pby_B 144 RDGSKLYGL 152 (337)
T ss_dssp TTSSCEEEE
T ss_pred CCCCEEEEe
Confidence 999988765
No 44
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.32 E-value=0.0032 Score=53.91 Aligned_cols=69 Identities=14% Similarity=0.117 Sum_probs=49.2
Q ss_pred cCCCCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEE-EeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 92 LDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINA-LTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 92 lt~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~r-LT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
+.....+.+++|||||+.|+...++.+.+.+...+.... .+..+.. .....+.|||||+.|+
T Consensus 173 ~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~v~~v~fspdg~~l~ 235 (365)
T 4h5i_A 173 IETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKN-----------------WSLSKINFIADDTVLI 235 (365)
T ss_dssp EECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTT-----------------EEEEEEEEEETTEEEE
T ss_pred eCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCC-----------------CCEEEEEEcCCCCEEE
Confidence 334567899999999999999998888888877666543 2322210 0234688999999988
Q ss_pred EEEEcCC
Q psy7767 171 YMKFNDA 177 (200)
Q Consensus 171 f~r~D~s 177 (200)
....+.+
T Consensus 236 ~~s~d~~ 242 (365)
T 4h5i_A 236 AASLKKG 242 (365)
T ss_dssp EEEESSS
T ss_pred EEecCCc
Confidence 7766653
No 45
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.23 E-value=0.0018 Score=52.37 Aligned_cols=56 Identities=16% Similarity=-0.086 Sum_probs=41.7
Q ss_pred CceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
....++|||||+.|+.. ++.|++.++++++.......+. ...++.|||||++|+..
T Consensus 242 ~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~-------------------~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 242 FYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLPH-------------------SYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp CEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECSS-------------------CCCEEEECTTSCEEEEE
T ss_pred ceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCCC-------------------ceeeEEECCCCCEEEEE
Confidence 34568999999998766 8999999998776654443221 34578999999987654
No 46
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.21 E-value=0.0012 Score=54.08 Aligned_cols=65 Identities=6% Similarity=-0.025 Sum_probs=46.5
Q ss_pred CCCCceeeEECcCCCEEEEEE--------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVK--------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD 165 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~--------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD 165 (200)
.+.....+++||||+.|+... ++.|++.+.++++..+....+. ...++.||||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-------------------~~~~~~~s~d 99 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-------------------KPFGATINNT 99 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-------------------CCCSEEEETT
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-------------------CcceEEECCC
Confidence 345678899999999997776 3479999988877655444222 3457899999
Q ss_pred CCEEEEEEEcCC
Q psy7767 166 GSILAYMKFNDA 177 (200)
Q Consensus 166 Gk~Laf~r~D~s 177 (200)
|++|++....+.
T Consensus 100 g~~l~v~~~~~~ 111 (353)
T 3vgz_A 100 TQTLWFGNTVNS 111 (353)
T ss_dssp TTEEEEEETTTT
T ss_pred CCEEEEEecCCC
Confidence 998766544333
No 47
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.20 E-value=0.0021 Score=52.18 Aligned_cols=76 Identities=11% Similarity=0.007 Sum_probs=46.9
Q ss_pred eecCCCCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeE---EEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767 90 SDLDGSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSIN---ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP 164 (200)
Q Consensus 90 ~~lt~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~---rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP 164 (200)
..+........++|||||+.|++.. ++.|.+.+++.+... +....+ .....+.|||
T Consensus 78 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------------------~~~~~~~~s~ 138 (343)
T 1ri6_A 78 AESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-------------------DGCHSANISP 138 (343)
T ss_dssp EEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-------------------TTBCCCEECT
T ss_pred cccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-------------------CCceEEEECC
Confidence 3333334678899999999988876 456888877433322 221111 1345688999
Q ss_pred CCCEEEEEEEcCCcceEEEE
Q psy7767 165 DGSILAYMKFNDARVHNMSY 184 (200)
Q Consensus 165 DGk~Laf~r~D~s~v~~~~i 184 (200)
||++|+.....+..+..+.+
T Consensus 139 dg~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 139 DNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp TSSEEEEEEGGGTEEEEEEE
T ss_pred CCCEEEEecCCCCEEEEEEe
Confidence 99988655424444555444
No 48
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.20 E-value=0.0017 Score=54.37 Aligned_cols=73 Identities=12% Similarity=0.076 Sum_probs=47.4
Q ss_pred CceeeEECcCCCEEEEEEc---CcEEEEECC--CCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVKD---NNLYQAYDD--FRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY 171 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~---gdLyv~~~~--~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf 171 (200)
....++|||||+.|+.... +.|.+.+++ ++....+..-.. | .....+.|||||++|+.
T Consensus 260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~------g-----------~~~~~~~~spdg~~l~~ 322 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT------G-----------IHPRNFIITPNGKYLLV 322 (361)
T ss_dssp CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC------S-----------SCCCEEEECTTSCEEEE
T ss_pred CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC------C-----------CCCceEEECCCCCEEEE
Confidence 3568999999999866653 346665554 555444432110 1 13567899999998876
Q ss_pred EEEcCCcceEEEEEe
Q psy7767 172 MKFNDARVHNMSYIH 186 (200)
Q Consensus 172 ~r~D~s~v~~~~i~~ 186 (200)
...+...+..|.+..
T Consensus 323 ~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 323 ACRDTNVIQIFERDQ 337 (361)
T ss_dssp EETTTTEEEEEEECT
T ss_pred EECCCCCEEEEEEEC
Confidence 655666777776653
No 49
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.20 E-value=0.0022 Score=60.24 Aligned_cols=71 Identities=7% Similarity=-0.035 Sum_probs=45.1
Q ss_pred eeeEECcCCCEEEEEEcC---------------cEEEEECCCCCe--EEEeeCCCcceEecccccceeeeeeeCCCcceE
Q psy7767 99 QLVQWSPVGHDLIFVKDN---------------NLYQAYDDFRSI--NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLW 161 (200)
Q Consensus 99 s~~~wSPDGk~IAFV~~g---------------dLyv~~~~~g~~--~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~ 161 (200)
..++|||| +.|+|++.. +||+.++.++.. +.+...... +. ...++.
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~-------~~---------~~~~~~ 274 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL-------PK---------RGHGAS 274 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC-------TT---------CEEEEE
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC-------Ce---------EEEEEE
Confidence 67899999 999999732 388888766542 223221110 00 124688
Q ss_pred EccCCCEEEEEEEcC--CcceEEEEEe
Q psy7767 162 FSPDGSILAYMKFND--ARVHNMSYIH 186 (200)
Q Consensus 162 WSPDGk~Laf~r~D~--s~v~~~~i~~ 186 (200)
|||||++|+|...+. ....++.++.
T Consensus 275 ~SpDG~~l~~~~~~~~~~~~~l~~~d~ 301 (741)
T 1yr2_A 275 VSSDGRWVVITSSEGTDPVNTVHVARV 301 (741)
T ss_dssp ECTTSCEEEEEEECTTCSCCEEEEEEE
T ss_pred ECCCCCEEEEEEEccCCCcceEEEEEC
Confidence 999999999998764 2334444443
No 50
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.18 E-value=0.0088 Score=48.65 Aligned_cols=66 Identities=15% Similarity=0.030 Sum_probs=44.5
Q ss_pred CceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCC-cceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGI-KGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~-~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
....++|||||+.+++.. ++.|++.++++++..+....+. ... .+ ....++.|||||++|++..
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~--~~-----------~~~~~~~~spdg~~l~~~~ 110 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE--VG-----------RSMYSFAISPDGKEVYATV 110 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE--EE-----------ECSSCEEECTTSSEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccc--cc-----------ccccceEECCCCCEEEEEc
Confidence 467889999999877665 4579999998877654333221 000 00 1246789999999998776
Q ss_pred Ec
Q psy7767 174 FN 175 (200)
Q Consensus 174 ~D 175 (200)
.+
T Consensus 111 ~~ 112 (349)
T 1jmx_B 111 NP 112 (349)
T ss_dssp EE
T ss_pred cc
Confidence 44
No 51
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.17 E-value=0.0019 Score=52.82 Aligned_cols=60 Identities=15% Similarity=0.094 Sum_probs=43.0
Q ss_pred CCCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCe---EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSI---NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI 168 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~---~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~ 168 (200)
.+.....++|||||+.++++. ++.|++.++++++. .+....+ ....++.|||||++
T Consensus 174 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-------------------~~~~~~~~spdg~~ 234 (331)
T 3u4y_A 174 GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-------------------NLPGTIVVSRDGST 234 (331)
T ss_dssp SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-------------------SCCCCEEECTTSSE
T ss_pred CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-------------------CCCceEEECCCCCE
Confidence 345678899999999987775 45799999887765 3222222 13457899999998
Q ss_pred EEEE
Q psy7767 169 LAYM 172 (200)
Q Consensus 169 Laf~ 172 (200)
|+..
T Consensus 235 l~v~ 238 (331)
T 3u4y_A 235 VYVL 238 (331)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8655
No 52
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.13 E-value=0.0014 Score=54.36 Aligned_cols=74 Identities=12% Similarity=0.036 Sum_probs=47.4
Q ss_pred CceeeEECcCCCEEEEEE--cCcEEEEECC-CCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDD-FRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~-~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
....++|||||+.|+... ++.|.+.+++ +|....+..-.. .| ....++.|||||++|+...
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-----~~-----------~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST-----EG-----------DFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC-----SS-----------SCCCEEEECTTSSEEEEEE
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec-----CC-----------CCcCeEEECCCCCEEEEEE
Confidence 356789999999986664 3568887775 233333322100 00 1356789999999887665
Q ss_pred EcCCcceEEEEEe
Q psy7767 174 FNDARVHNMSYIH 186 (200)
Q Consensus 174 ~D~s~v~~~~i~~ 186 (200)
.+...+..|.+..
T Consensus 305 ~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 305 QNTDNATLYARDL 317 (347)
T ss_dssp TTTTEEEEEEECT
T ss_pred cCCCcEEEEEEeC
Confidence 5666677776643
No 53
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.10 E-value=0.0023 Score=54.42 Aligned_cols=76 Identities=12% Similarity=0.105 Sum_probs=46.5
Q ss_pred CCCceeeEECcCCCEEEEEE--cCcEEEEECC-CCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDD-FRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY 171 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~-~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf 171 (200)
+.....++|||||+.|+... .+.|++.+++ +|+...+..-..+ ..| .....+.|||||++|+.
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~---~~g-----------~~p~~~~~spdg~~l~v 209 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP---DPG-----------DHPRWVAMHPTGNYLYA 209 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS---STT-----------CCEEEEEECTTSSEEEE
T ss_pred CCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC---CCC-----------CCCCEeEECCCCCEEEE
Confidence 45678899999999875554 3479998887 6665433220000 000 12456799999998865
Q ss_pred EEEcCCcceEEEE
Q psy7767 172 MKFNDARVHNMSY 184 (200)
Q Consensus 172 ~r~D~s~v~~~~i 184 (200)
.....+.+..+.+
T Consensus 210 ~~~~~~~v~v~~~ 222 (365)
T 1jof_A 210 LMEAGNRICEYVI 222 (365)
T ss_dssp EETTTTEEEEEEE
T ss_pred EECCCCeEEEEEE
Confidence 5434445555543
No 54
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.07 E-value=0.0039 Score=58.46 Aligned_cols=66 Identities=8% Similarity=-0.008 Sum_probs=43.7
Q ss_pred ceeeEECcCCCEEEEEEcC--------------cEEEEECCCCCe--EEEeeCCCcceEecccccceeeeeeeCCCcceE
Q psy7767 98 LQLVQWSPVGHDLIFVKDN--------------NLYQAYDDFRSI--NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLW 161 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~~g--------------dLyv~~~~~g~~--~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~ 161 (200)
...++|| ||+.|+|++.. +||+.++.++.. +.|...... .+. ...++.
T Consensus 177 ~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~------~~~---------~~~~~~ 240 (693)
T 3iuj_A 177 FSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPA------QHH---------RYVGAT 240 (693)
T ss_dssp SCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGG------GCC---------SEEEEE
T ss_pred eccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCC------CCe---------EEEEEE
Confidence 4678999 99999999754 388887765432 344432210 000 123678
Q ss_pred EccCCCEEEEEEEcCCcc
Q psy7767 162 FSPDGSILAYMKFNDARV 179 (200)
Q Consensus 162 WSPDGk~Laf~r~D~s~v 179 (200)
|||||++|+|.+......
T Consensus 241 ~SpDg~~l~~~~~~~~~~ 258 (693)
T 3iuj_A 241 VTEDDRFLLISAANSTSG 258 (693)
T ss_dssp ECTTSCEEEEEEESSSSC
T ss_pred EcCCCCEEEEEEccCCCC
Confidence 999999999987755443
No 55
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.98 E-value=0.0039 Score=50.79 Aligned_cols=55 Identities=16% Similarity=-0.003 Sum_probs=42.2
Q ss_pred CceeeEECc-CCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767 97 FLQLVQWSP-VGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY 171 (200)
Q Consensus 97 ~is~~~wSP-DGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf 171 (200)
....+.+|| ||+.++.. .+.|++.++.+++..+....+. ....+.|||||++|+.
T Consensus 256 ~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~-------------------~~~~~~~s~dg~~l~~ 311 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDH-------------------TYYCVAFDKKGDKLYL 311 (349)
T ss_dssp CEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSS-------------------CCCEEEECSSSSCEEE
T ss_pred cceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCCC-------------------CccceEECCCCCEEEE
Confidence 457789999 99998777 8899999998877654444331 2346899999998865
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.90 E-value=0.025 Score=45.44 Aligned_cols=71 Identities=13% Similarity=0.077 Sum_probs=51.5
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..+.|+|||+.|+... ++.|.+.++..++......... ....+.|||||+.|+. .
T Consensus 265 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-------------------~v~~~~~s~~~~~l~~-~ 324 (337)
T 1gxr_A 265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS-------------------SVLSCDISVDDKYIVT-G 324 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-------------------CEEEEEECTTSCEEEE-E
T ss_pred ccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCC-------------------cEEEEEECCCCCEEEE-e
Confidence 56689999999999988776 5679999998777653332221 2346899999998865 4
Q ss_pred EcCCcceEEEEE
Q psy7767 174 FNDARVHNMSYI 185 (200)
Q Consensus 174 ~D~s~v~~~~i~ 185 (200)
..++.+..+.+.
T Consensus 325 ~~dg~i~iw~~~ 336 (337)
T 1gxr_A 325 SGDKKATVYEVI 336 (337)
T ss_dssp ETTSCEEEEEEE
T ss_pred cCCCeEEEEEEe
Confidence 556677777654
No 57
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.85 E-value=0.0036 Score=57.26 Aligned_cols=69 Identities=13% Similarity=0.086 Sum_probs=47.5
Q ss_pred CCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767 96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN 175 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D 175 (200)
+....++|||||+.||+..++.+.+.++.++...+.-.... +....+.|||||++||-. ..
T Consensus 19 g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~------------------~~v~~~~~spdg~~lasg-~~ 79 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHS------------------HQTTVAKTSPSGYYCASG-DV 79 (611)
T ss_dssp TCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCS------------------SCEEEEEECTTSSEEEEE-ET
T ss_pred CceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCC------------------CceEEEEECCCCcEEEEE-eC
Confidence 45677899999999999999999999987655433222111 123468999999988744 34
Q ss_pred CCcceEEE
Q psy7767 176 DARVHNMS 183 (200)
Q Consensus 176 ~s~v~~~~ 183 (200)
++.+.++.
T Consensus 80 d~~v~lWd 87 (611)
T 1nr0_A 80 HGNVRIWD 87 (611)
T ss_dssp TSEEEEEE
T ss_pred CCCEEEeE
Confidence 44455554
No 58
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.84 E-value=0.0072 Score=52.05 Aligned_cols=35 Identities=14% Similarity=0.206 Sum_probs=30.0
Q ss_pred eEECcCCCEEEEEE-----cCcEEEEECCCCCeEEEeeCC
Q psy7767 101 VQWSPVGHDLIFVK-----DNNLYQAYDDFRSINALTRDG 135 (200)
Q Consensus 101 ~~wSPDGk~IAFV~-----~gdLyv~~~~~g~~~rLT~dg 135 (200)
..|+|+|++|+|+. +..||.++++++..++|+...
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~ 148 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHY 148 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSC
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCC
Confidence 37999999999997 348999999988888999764
No 59
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.81 E-value=0.0056 Score=53.94 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=52.1
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCCC----CeEEEeeCCCcceEecccccceeeeeeeCC-CcceEEcc--CCC
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFR----SINALTRDGIKGVLFNGVADWVYEEEVFSS-TKTLWFSP--DGS 167 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g----~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~-~~~~~WSP--DGk 167 (200)
...+..++|||||+.||+..++.|.+.+++++ +..+...... +. ...+.||| ||+
T Consensus 18 ~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~------------------~~~v~~~~~sp~~~~~ 79 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHG------------------SSVVTTVKFSPIKGSQ 79 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTT------------------TSCEEEEEECSSTTCC
T ss_pred cCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCC------------------CceEEEEEECcCCCCC
Confidence 46789999999999999999999999999876 3332222111 12 35789999 999
Q ss_pred EEEEEEEcCCcceEEEEE
Q psy7767 168 ILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 168 ~Laf~r~D~s~v~~~~i~ 185 (200)
.|+.. ..++.+..+.+.
T Consensus 80 ~l~s~-~~dg~v~vw~~~ 96 (615)
T 1pgu_A 80 YLCSG-DESGKVIVWGWT 96 (615)
T ss_dssp EEEEE-ETTSEEEEEEEE
T ss_pred EEEEe-cCCCEEEEEeCC
Confidence 88754 455667777664
No 60
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.79 E-value=0.018 Score=47.88 Aligned_cols=83 Identities=16% Similarity=0.103 Sum_probs=52.4
Q ss_pred cCCCCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767 92 LDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY 171 (200)
Q Consensus 92 lt~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf 171 (200)
+.....+..++|||||..|+-..++.+.+.+++.+............. ..+. -.....+.|||||++|+
T Consensus 234 ~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~-~~~~---------~~~v~~~~~spdg~~l~- 302 (319)
T 3frx_A 234 LSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGY-SKAA---------EPHAVSLAWSADGQTLF- 302 (319)
T ss_dssp EECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTC-CGGG---------CCCEEEEEECTTSSEEE-
T ss_pred ecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCcccccc-ccCc---------CcceeEEEECCCCCEEE-
Confidence 334567889999999999999988888888776544332221110000 0000 01234689999999886
Q ss_pred EEEcCCcceEEEEE
Q psy7767 172 MKFNDARVHNMSYI 185 (200)
Q Consensus 172 ~r~D~s~v~~~~i~ 185 (200)
....++.+..+.+.
T Consensus 303 sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 303 AGYTDNVIRVWQVM 316 (319)
T ss_dssp EEETTSCEEEEEEE
T ss_pred EeecCceEEEEEEe
Confidence 44566778877764
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.78 E-value=0.023 Score=45.67 Aligned_cols=70 Identities=14% Similarity=0.031 Sum_probs=49.7
Q ss_pred CCCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
....+..++|+|||+.|+... ++.|++.++.+++..++.... +....+.|||||+.|+..
T Consensus 223 ~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l~~~ 283 (337)
T 1gxr_A 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHE-------------------SCVLSLKFAYCGKWFVST 283 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCS-------------------SCEEEEEECTTSSEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCc-------------------cceeEEEECCCCCEEEEe
Confidence 356688999999999999886 578999999877765544321 133578999999987644
Q ss_pred EEcCCcceEEE
Q psy7767 173 KFNDARVHNMS 183 (200)
Q Consensus 173 r~D~s~v~~~~ 183 (200)
..++.+..+.
T Consensus 284 -~~dg~i~~~~ 293 (337)
T 1gxr_A 284 -GKDNLLNAWR 293 (337)
T ss_dssp -ETTSEEEEEE
T ss_pred -cCCCcEEEEE
Confidence 4445454443
No 62
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.72 E-value=0.029 Score=46.94 Aligned_cols=70 Identities=19% Similarity=0.192 Sum_probs=48.8
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
+..+..++|||||+.||... ++.|.+.++.+++..+...... .....+.|||||+.|+..
T Consensus 164 ~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~------------------~~v~~l~~spd~~~l~s~- 224 (321)
T 3ow8_A 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA------------------MPIRSLTFSPDSQLLVTA- 224 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS------------------SCCCEEEECTTSCEEEEE-
T ss_pred CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccC------------------CceeEEEEcCCCCEEEEE-
Confidence 45678999999999998875 5689999998776543332111 134578999999987644
Q ss_pred EcCCcceEEE
Q psy7767 174 FNDARVHNMS 183 (200)
Q Consensus 174 ~D~s~v~~~~ 183 (200)
..++.+..+.
T Consensus 225 s~dg~i~iwd 234 (321)
T 3ow8_A 225 SDDGYIKIYD 234 (321)
T ss_dssp CTTSCEEEEE
T ss_pred cCCCeEEEEE
Confidence 4455555554
No 63
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.71 E-value=0.041 Score=44.60 Aligned_cols=74 Identities=11% Similarity=-0.024 Sum_probs=52.4
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|+|||+.|+... ++.|.+.++.+++..+....+. ....+.|+|||+.|+...
T Consensus 74 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------------~v~~~~~~~~~~~l~~~~ 134 (369)
T 3zwl_B 74 TGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPV-------------------PVKRVEFSPCGNYFLAIL 134 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS-------------------CEEEEEECTTSSEEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCC-------------------CeEEEEEccCCCEEEEec
Confidence 46789999999999998875 5679999998877655444221 234689999999887654
Q ss_pred Ec----CCcceEEEEEee
Q psy7767 174 FN----DARVHNMSYIHY 187 (200)
Q Consensus 174 ~D----~s~v~~~~i~~~ 187 (200)
.+ ++.+..+.+...
T Consensus 135 ~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 135 DNVMKNPGSINIYEIERD 152 (369)
T ss_dssp CCBTTBCCEEEEEEEEEC
T ss_pred CCccCCCCEEEEEEecCC
Confidence 43 155555555443
No 64
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.71 E-value=0.0054 Score=52.04 Aligned_cols=70 Identities=7% Similarity=-0.020 Sum_probs=48.1
Q ss_pred CCCCceeeEECcCCCEEEEEE---------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVK---------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP 164 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~---------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP 164 (200)
....+..++|+|||+.|+... ++.|++.++.+++.......+ +....+.|+|
T Consensus 252 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~-------------------~~~~~~~~~~ 312 (433)
T 3bws_A 252 KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP-------------------GNKRHIVSGN 312 (433)
T ss_dssp CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE-------------------ECEEEEEECS
T ss_pred CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC-------------------CCcceEEECC
Confidence 345578899999999998886 458999998877654443211 1234678999
Q ss_pred CCCEEEEEEEcCCcceEE
Q psy7767 165 DGSILAYMKFNDARVHNM 182 (200)
Q Consensus 165 DGk~Laf~r~D~s~v~~~ 182 (200)
||+.|++....++.+..+
T Consensus 313 ~g~~l~~~~~~~~~v~v~ 330 (433)
T 3bws_A 313 TENKIYVSDMCCSKIEVY 330 (433)
T ss_dssp STTEEEEEETTTTEEEEE
T ss_pred CCCEEEEEecCCCEEEEE
Confidence 999887765555444433
No 65
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.68 E-value=0.016 Score=49.37 Aligned_cols=77 Identities=19% Similarity=0.223 Sum_probs=52.5
Q ss_pred ecCCCCCceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767 91 DLDGSNFLQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG 166 (200)
Q Consensus 91 ~lt~~~~is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG 166 (200)
.+..+..+..+.|+|+|+.|+.+. ++.|.+.++.++....+.. .+. -+....+.|||||
T Consensus 299 ~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h-----------------~~~v~~~~~s~dg 361 (401)
T 4aez_A 299 TVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH-----------------DTRVLYSALSPDG 361 (401)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECC-----------------SSCCCEEEECTTS
T ss_pred EEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCC-----------------CCCEEEEEECCCC
Confidence 333456789999999999999986 6789998887765443322 111 0245678999999
Q ss_pred CEEEEEEEcCCcceEEEEE
Q psy7767 167 SILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 167 k~Laf~r~D~s~v~~~~i~ 185 (200)
+.|+.. ..++.+..+.+.
T Consensus 362 ~~l~s~-~~dg~i~iw~~~ 379 (401)
T 4aez_A 362 RILSTA-ASDENLKFWRVY 379 (401)
T ss_dssp SEEEEE-CTTSEEEEEECC
T ss_pred CEEEEE-eCCCcEEEEECC
Confidence 988654 455556666543
No 66
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.68 E-value=0.0062 Score=49.54 Aligned_cols=62 Identities=21% Similarity=0.205 Sum_probs=46.0
Q ss_pred CceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767 97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN 175 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D 175 (200)
.+..++|||||+.|+-.. ++.|.+.++.+++..+...... +....+.|||||+.|+....|
T Consensus 275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------------~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD------------------QPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS------------------SCEEEEEECTTSSCEEEEECC
T ss_pred ceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC------------------CCceEEEECCCCCeEEEEecc
Confidence 588999999999988875 5789999998776543332111 134578999999999987655
Q ss_pred C
Q psy7767 176 D 176 (200)
Q Consensus 176 ~ 176 (200)
+
T Consensus 337 ~ 337 (368)
T 3mmy_A 337 D 337 (368)
T ss_dssp C
T ss_pred c
Confidence 4
No 67
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.67 E-value=0.0069 Score=49.74 Aligned_cols=70 Identities=7% Similarity=0.081 Sum_probs=49.5
Q ss_pred CCCceeeEECcCCCEEEEE-EcCcEEEEECCCCCe---EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSI---NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~---~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
...+..++|+|||+.|+.. .++.|.+.++++++. ..+.... +....+.|+|||+.|+
T Consensus 8 ~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~-------------------~~v~~~~~~~~~~~l~ 68 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN-------------------GQVTGVDWAPDSNRIV 68 (372)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS-------------------SCEEEEEEETTTTEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCC-------------------CcccEEEEeCCCCEEE
Confidence 4678999999999999988 577899999887752 2222111 1345789999999887
Q ss_pred EEEEcCCcceEEEE
Q psy7767 171 YMKFNDARVHNMSY 184 (200)
Q Consensus 171 f~r~D~s~v~~~~i 184 (200)
.. ..++.+..+.+
T Consensus 69 ~~-~~dg~i~vwd~ 81 (372)
T 1k8k_C 69 TC-GTDRNAYVWTL 81 (372)
T ss_dssp EE-ETTSCEEEEEE
T ss_pred EE-cCCCeEEEEEC
Confidence 54 45556666654
No 68
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.67 E-value=0.018 Score=46.95 Aligned_cols=56 Identities=7% Similarity=0.057 Sum_probs=41.3
Q ss_pred ceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 98 LQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+.|||||+.+++.. ++.|++.+.++++..+... .+. ...++.|||||++|+..
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------------------~~~~~~~s~dg~~l~~~ 202 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK-------------------MSTGLALDSEGKRLYTT 202 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT-------------------TCCCCEEETTTTEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC-------------------ccceEEECCCCCEEEEE
Confidence 46789999999987776 3569999998777655443 221 24568999999987654
No 69
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.63 E-value=0.034 Score=46.69 Aligned_cols=73 Identities=21% Similarity=0.251 Sum_probs=47.4
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEE-EeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINA-LTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~r-LT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+..++|+|||+.|+-.. ++.|.+.+++.+.... +.. ..+.. .....+.|+|||+.|+-.
T Consensus 105 ~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-------~~~h~---------~~v~~~~~~p~~~~l~s~ 168 (345)
T 3fm0_A 105 ENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV-------LNSHT---------QDVKHVVWHPSQELLASA 168 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEE-------ECCCC---------SCEEEEEECSSSSCEEEE
T ss_pred CCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEE-------ecCcC---------CCeEEEEECCCCCEEEEE
Confidence 45789999999999998875 5688888887654322 211 00100 123468899999988654
Q ss_pred EEcCCcceEEEE
Q psy7767 173 KFNDARVHNMSY 184 (200)
Q Consensus 173 r~D~s~v~~~~i 184 (200)
..++.+..+.+
T Consensus 169 -s~d~~i~~w~~ 179 (345)
T 3fm0_A 169 -SYDDTVKLYRE 179 (345)
T ss_dssp -ETTSCEEEEEE
T ss_pred -eCCCcEEEEEe
Confidence 44455665543
No 70
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.62 E-value=0.053 Score=43.77 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=54.7
Q ss_pred eecCCCCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767 90 SDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL 169 (200)
Q Consensus 90 ~~lt~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L 169 (200)
..+.....+..+.|+|++..++-..++.|.+.+++++....-...........+.+ +....+.|||||++|
T Consensus 251 ~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~---------~~v~~l~~s~dg~~l 321 (340)
T 4aow_A 251 YTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEP---------PQCTSLAWSADGQTL 321 (340)
T ss_dssp EEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCC---------CCEEEEEECTTSSEE
T ss_pred eeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCC---------CCEEEEEECCCCCEE
Confidence 33434567889999999999988889999999988765433222111000011111 133578999999987
Q ss_pred EEEEEcCCcceEEEEE
Q psy7767 170 AYMKFNDARVHNMSYI 185 (200)
Q Consensus 170 af~r~D~s~v~~~~i~ 185 (200)
+ ....++.+.++.+.
T Consensus 322 ~-sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 322 F-AGYTDNLVRVWQVT 336 (340)
T ss_dssp E-EEETTSCEEEEEEE
T ss_pred E-EEeCCCEEEEEeCC
Confidence 5 55666778777654
No 71
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.61 E-value=0.014 Score=46.81 Aligned_cols=67 Identities=25% Similarity=0.272 Sum_probs=46.5
Q ss_pred ceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCC
Q psy7767 98 LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDA 177 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s 177 (200)
..-++|||++ .||.-.++.|.+.++++|+..++-...... .....+.|||||+.|+- ...++
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~----------------~~V~~v~~~~~~~~l~s-gs~Dg 89 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPG----------------EYISSVAWIKEGNYLAV-GTSSA 89 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTT----------------CCEEEEEECTTSSEEEE-EETTS
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCC----------------CeEEEEEECCCCCEEEE-EECCC
Confidence 3568999997 888888999999999988876554321100 12357899999998864 44455
Q ss_pred cceEE
Q psy7767 178 RVHNM 182 (200)
Q Consensus 178 ~v~~~ 182 (200)
.+..+
T Consensus 90 ~v~iw 94 (318)
T 4ggc_A 90 EVQLW 94 (318)
T ss_dssp EEEEE
T ss_pred cEEEe
Confidence 55544
No 72
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.58 E-value=0.0088 Score=52.74 Aligned_cols=69 Identities=26% Similarity=0.284 Sum_probs=46.0
Q ss_pred CCCceeeEECcCCCEEEEEEc-CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.||-... +.|.+.+..+.....+.... +....+.|||||++||-.
T Consensus 16 ~~~V~~~a~spdg~~las~~~d~~v~iWd~~~~~~~~l~gh~-------------------~~V~~l~fspdg~~las~- 75 (577)
T 2ymu_A 16 SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS-------------------SSVWGVAFSPDGQTIASA- 75 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCS-------------------SCEEEEEECTTSSEEEEE-
T ss_pred CCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCEEEEEeCCC-------------------CCEEEEEECCCCCEEEEE-
Confidence 567899999999999998764 56888886433333333211 123468999999988754
Q ss_pred EcCCcceEEE
Q psy7767 174 FNDARVHNMS 183 (200)
Q Consensus 174 ~D~s~v~~~~ 183 (200)
..++.+.++.
T Consensus 76 ~~d~~i~vWd 85 (577)
T 2ymu_A 76 SDDKTVKLWN 85 (577)
T ss_dssp ETTSCEEEEE
T ss_pred eCCCEEEEEE
Confidence 4445555553
No 73
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.056 Score=43.76 Aligned_cols=73 Identities=14% Similarity=0.056 Sum_probs=48.7
Q ss_pred CCCCceeeEECcCCCEEEEEEcC---------------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCc
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVKDN---------------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTK 158 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~~g---------------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~ 158 (200)
....+..+.|+|+|+.++..... .+.+.++..++......... +...
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~------------------~~v~ 319 (369)
T 3zwl_B 258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF------------------GPLN 319 (369)
T ss_dssp CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS------------------SCEE
T ss_pred CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc------------------CcEE
Confidence 45678899999999999998643 35666665554433322111 1345
Q ss_pred ceEEccCCCEEEEEEEcCCcceEEEEE
Q psy7767 159 TLWFSPDGSILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 159 ~~~WSPDGk~Laf~r~D~s~v~~~~i~ 185 (200)
.+.|||||+.|+- ...++.+..+.+.
T Consensus 320 ~~~~s~~~~~l~s-~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 320 TVAISPQGTSYAS-GGEDGFIRLHHFE 345 (369)
T ss_dssp EEEECTTSSEEEE-EETTSEEEEEEEC
T ss_pred EEEECCCCCEEEE-EcCCCeEEEEECc
Confidence 6899999998764 4556677777664
No 74
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.53 E-value=0.023 Score=49.64 Aligned_cols=73 Identities=10% Similarity=-0.034 Sum_probs=44.0
Q ss_pred eeecCCCCCceeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeEEEeeCC-CcceEecccccceeeeeeeCC
Q psy7767 89 VSDLDGSNFLQLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSINALTRDG-IKGVLFNGVADWVYEEEVFSS 156 (200)
Q Consensus 89 v~~lt~~~~is~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~rLT~dg-~~~~~~nG~pdwv~eEEi~~~ 156 (200)
+..+..+... .+.+||||+++.... ++.|.+.+..+.+...-..-+ .... ..| ..
T Consensus 60 ~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~-~~g-----------~~ 126 (373)
T 2mad_H 60 LGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRF-DVG-----------PY 126 (373)
T ss_pred EEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccc-ccC-----------CC
Confidence 3444444444 999999999987664 235778888766554322222 1100 000 13
Q ss_pred CcceEEccCCCEEEEEEE
Q psy7767 157 TKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 157 ~~~~~WSPDGk~Laf~r~ 174 (200)
..++.|||||++|+....
T Consensus 127 p~~~~~spDG~~l~v~n~ 144 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQF 144 (373)
T ss_pred ccceEECCCCCEEEEEec
Confidence 457899999999876643
No 75
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.52 E-value=0.0097 Score=51.72 Aligned_cols=31 Identities=16% Similarity=-0.048 Sum_probs=26.8
Q ss_pred CceeeEECcCCCEEEEEEcCcEEEEECCCCC
Q psy7767 97 FLQLVQWSPVGHDLIFVKDNNLYQAYDDFRS 127 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~ 127 (200)
.+..++|||||+.|+...++.|++.++.+|+
T Consensus 6 p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~ 36 (450)
T 2vdu_B 6 PLQNLLTSRDGSLVFAIIKNCILSFKYQSPN 36 (450)
T ss_dssp CCCEEEECSSSSEEEEEETTEEEEEEEETTT
T ss_pred cEEEEEecCCCCEEEEEeCCeEEEEECCCCC
Confidence 4677889999998887888999999988887
No 76
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.47 E-value=0.041 Score=45.98 Aligned_cols=72 Identities=13% Similarity=0.090 Sum_probs=50.6
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|+|||+.|+-.. ++.|.+.++.+++..+.-.... +...++.|||||+.|+ ..
T Consensus 248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~------------------~~v~~v~~s~~g~~l~-s~ 308 (321)
T 3ow8_A 248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ------------------DQVWGVKYNGNGSKIV-SV 308 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS------------------SCEEEEEECTTSSEEE-EE
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCC------------------CcEEEEEECCCCCEEE-EE
Confidence 45678999999999988775 5679999988766543322111 1234789999999886 55
Q ss_pred EcCCcceEEEEE
Q psy7767 174 FNDARVHNMSYI 185 (200)
Q Consensus 174 ~D~s~v~~~~i~ 185 (200)
.+++.+..+..|
T Consensus 309 ~~d~~i~vwd~p 320 (321)
T 3ow8_A 309 GDDQEIHIYDCP 320 (321)
T ss_dssp ETTCCEEEEECC
T ss_pred eCCCeEEEEeCC
Confidence 666777777643
No 77
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.45 E-value=0.027 Score=48.04 Aligned_cols=73 Identities=15% Similarity=0.036 Sum_probs=50.8
Q ss_pred CCCceeeEECcCCCE-EEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 95 SNFLQLVQWSPVGHD-LIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 95 ~~~is~~~wSPDGk~-IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+..++|||||.. ||-.. ++.|.+.++.+++..++. +-. +...++.|||||++|+..
T Consensus 257 ~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~--~H~-----------------~~V~~v~~sp~~~~llas 317 (344)
T 4gqb_B 257 SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQ--AHR-----------------DFVRDATWSPLNHSLLTT 317 (344)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEEC--CCS-----------------SCEEEEEECSSSTTEEEE
T ss_pred CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEc--CCC-----------------CCEEEEEEeCCCCeEEEE
Confidence 466889999999965 54443 578999998877654432 210 123578999999988777
Q ss_pred EEcCCcceEEEEEe
Q psy7767 173 KFNDARVHNMSYIH 186 (200)
Q Consensus 173 r~D~s~v~~~~i~~ 186 (200)
...++.+..+.++.
T Consensus 318 ~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 318 VGWDHQVVHHVVPT 331 (344)
T ss_dssp EETTSCEEEEECCC
T ss_pred EcCCCeEEEEECCC
Confidence 77777777776654
No 78
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.43 E-value=0.025 Score=48.67 Aligned_cols=68 Identities=25% Similarity=0.263 Sum_probs=48.1
Q ss_pred ceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCC
Q psy7767 98 LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDA 177 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s 177 (200)
..-+.||++ +.||...++.|++.++.+|+..++....... .....+.|||||++||-. ..++
T Consensus 108 ~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~----------------~~V~sv~fspdg~~lasg-s~Dg 169 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQPG----------------EYISSVAWIKEGNYLAVG-TSSA 169 (420)
T ss_dssp CBCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCSTT----------------CCEEEEEECTTSSEEEEE-ETTS
T ss_pred ceeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCCC----------------CcEEEEEECCCCCEEEEE-ECCC
Confidence 466899986 5888888999999999999877665422100 123578999999988744 4455
Q ss_pred cceEEE
Q psy7767 178 RVHNMS 183 (200)
Q Consensus 178 ~v~~~~ 183 (200)
.+.++.
T Consensus 170 ~v~iWd 175 (420)
T 4gga_A 170 EVQLWD 175 (420)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 565553
No 79
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.41 E-value=0.02 Score=48.49 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=52.5
Q ss_pred CCCceeeEECcCCCEEEEEE-cCc-EEEEECCCCCeEEEeeCC-CcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNN-LYQAYDDFRSINALTRDG-IKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY 171 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gd-Lyv~~~~~g~~~rLT~dg-~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf 171 (200)
...+..++|||||+.||-.. ++. |.+.++.+++..+....| .. +....+.|||||+.|+-
T Consensus 195 ~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~-----------------~~v~~~~~s~~~~~l~s 257 (355)
T 3vu4_A 195 TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR-----------------ADVVDMKWSTDGSKLAV 257 (355)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC-----------------SCEEEEEECTTSCEEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC-----------------CcEEEEEECCCCCEEEE
Confidence 56789999999999998876 456 999999887765433322 10 13357899999998875
Q ss_pred EEEcCCcceEEEEEe
Q psy7767 172 MKFNDARVHNMSYIH 186 (200)
Q Consensus 172 ~r~D~s~v~~~~i~~ 186 (200)
. .+++.+..+.+..
T Consensus 258 ~-s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 258 V-SDKWTLHVFEIFN 271 (355)
T ss_dssp E-ETTCEEEEEESSC
T ss_pred E-ECCCEEEEEEccC
Confidence 4 5556677776543
No 80
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.38 E-value=0.048 Score=43.59 Aligned_cols=72 Identities=22% Similarity=0.176 Sum_probs=51.1
Q ss_pred CCCCceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
....+....|+|+++.++... ++.|.+.++.+++..+....-. +....+.|||||+.|+
T Consensus 239 ~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~------------------~~V~~l~~spdg~~l~ 300 (318)
T 4ggc_A 239 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT------------------SRVLSLTMSPDGATVA 300 (318)
T ss_dssp CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS------------------SCEEEEEECTTSSCEE
T ss_pred ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCC------------------CCEEEEEEcCCCCEEE
Confidence 356678899999999998886 4689999998776654332111 1235789999999886
Q ss_pred EEEEcCCcceEEEE
Q psy7767 171 YMKFNDARVHNMSY 184 (200)
Q Consensus 171 f~r~D~s~v~~~~i 184 (200)
....++.+.++.+
T Consensus 301 -S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 301 -SAAADETLRLWRC 313 (318)
T ss_dssp -EEETTTEEEEECC
T ss_pred -EEecCCeEEEEEC
Confidence 4556666776653
No 81
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.36 E-value=0.0078 Score=57.32 Aligned_cols=74 Identities=12% Similarity=0.141 Sum_probs=48.3
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+...+|||||+.||-.. ++.|.+.+.++ ....+. ....+ . + ....++.|||||+.|| +.
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~--~~~~~-~---------~---~sv~svafSPDG~~LA-sg 147 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD--SKGNL-S---------S---RTYHCFEWNPIESSIV-VG 147 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC--CSSCS-T---------T---TCEEEEEECSSSSCEE-EE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc--CCCcc-c---------c---ccEEEEEEcCCCCEEE-EE
Confidence 46689999999999999875 56888887543 222222 11000 0 0 1245789999999886 55
Q ss_pred EcCCcceEEEEE
Q psy7767 174 FNDARVHNMSYI 185 (200)
Q Consensus 174 ~D~s~v~~~~i~ 185 (200)
.+++.+.++.+.
T Consensus 148 s~DGtVkIWd~~ 159 (588)
T 2j04_A 148 NEDGELQFFSIR 159 (588)
T ss_dssp ETTSEEEEEECC
T ss_pred cCCCEEEEEECC
Confidence 667777777643
No 82
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.34 E-value=0.032 Score=45.37 Aligned_cols=70 Identities=14% Similarity=0.067 Sum_probs=48.5
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|+|||+.|+... ++.|.+.++.+++..+...... .....+.|+|||+.|+..
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~------------------~~v~~~~~~~~~~~l~s~- 83 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK------------------LGISDVAWSSDSNLLVSA- 83 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS------------------SCEEEEEECTTSSEEEEE-
T ss_pred CCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCC------------------CceEEEEEcCCCCEEEEE-
Confidence 46789999999999998875 5688888888776654433221 123468999999988654
Q ss_pred EcCCcceEEE
Q psy7767 174 FNDARVHNMS 183 (200)
Q Consensus 174 ~D~s~v~~~~ 183 (200)
..++.+..+.
T Consensus 84 ~~d~~i~vwd 93 (312)
T 4ery_A 84 SDDKTLKIWD 93 (312)
T ss_dssp ETTSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 4445555443
No 83
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.33 E-value=0.023 Score=48.61 Aligned_cols=85 Identities=19% Similarity=0.099 Sum_probs=48.7
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeee---CCCcceEEccCCCEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVF---SSTKTLWFSPDGSILAY 171 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~---~~~~~~~WSPDGk~Laf 171 (200)
...+..++|||||+.||...++.+.+.++.++............ ...+.-....... .....+.|||||+.|+.
T Consensus 64 ~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 64 TSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAA---NKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp SSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC--------------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCcccc---ccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 45678999999999999988888888888877654332211100 0000000000000 01347899999998875
Q ss_pred EEEcCCcceEEE
Q psy7767 172 MKFNDARVHNMS 183 (200)
Q Consensus 172 ~r~D~s~v~~~~ 183 (200)
. ..++.+.++.
T Consensus 141 ~-~~d~~i~iwd 151 (393)
T 1erj_A 141 G-AEDRLIRIWD 151 (393)
T ss_dssp E-ETTSCEEEEE
T ss_pred E-cCCCeEEEEE
Confidence 4 4445555543
No 84
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.24 E-value=0.043 Score=47.15 Aligned_cols=73 Identities=23% Similarity=0.207 Sum_probs=51.9
Q ss_pred CCCCceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
....+....|+|+++.++... ++.|.+.++.+++..+.-. |-. +....+.|||||++|+
T Consensus 319 ~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~-gH~-----------------~~V~~l~~spdg~~l~ 380 (420)
T 4gga_A 319 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-GHT-----------------SRVLSLTMSPDGATVA 380 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-CCS-----------------SCEEEEEECTTSSCEE
T ss_pred cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc-CCC-----------------CCEEEEEEcCCCCEEE
Confidence 456778899999999999886 4689999998776543222 210 1335789999999886
Q ss_pred EEEEcCCcceEEEEE
Q psy7767 171 YMKFNDARVHNMSYI 185 (200)
Q Consensus 171 f~r~D~s~v~~~~i~ 185 (200)
....++.+..+.+.
T Consensus 381 -S~s~D~tvriWdv~ 394 (420)
T 4gga_A 381 -SAAADETLRLWRCF 394 (420)
T ss_dssp -EEETTTEEEEECCS
T ss_pred -EEecCCeEEEEECC
Confidence 44556667777653
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.23 E-value=0.065 Score=45.59 Aligned_cols=72 Identities=17% Similarity=0.197 Sum_probs=51.7
Q ss_pred CCCceeeEECcCCCEEEEEE----cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK----DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~----~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
...+..++|+|+|..++.+. ++.|.+.++.+++..+....+. ....+.|||||+.|+
T Consensus 259 ~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~-------------------~v~~~~~s~~~~~l~ 319 (401)
T 4aez_A 259 NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS-------------------QVTSLIWSPHSKEIM 319 (401)
T ss_dssp SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS-------------------CEEEEEECSSSSEEE
T ss_pred cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC-------------------cEEEEEECCCCCeEE
Confidence 46679999999998877774 5789999998877654443221 245789999999887
Q ss_pred EEEE-cCCcceEEEEE
Q psy7767 171 YMKF-NDARVHNMSYI 185 (200)
Q Consensus 171 f~r~-D~s~v~~~~i~ 185 (200)
.... +++.+..+.+.
T Consensus 320 ~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 320 STHGFPDNNLSIWSYS 335 (401)
T ss_dssp EEECTTTCEEEEEEEE
T ss_pred EEeecCCCcEEEEecC
Confidence 7643 45666666544
No 86
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.23 E-value=0.019 Score=52.84 Aligned_cols=69 Identities=7% Similarity=-0.026 Sum_probs=48.5
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.||... +|.|.+.++.++...+...... +....+.|||||+.|+..
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~------------------~~v~~~~~s~~~~~l~~~- 73 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTE------------------TPVRAGKFIARKNWIIVG- 73 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS------------------SCEEEEEEEGGGTEEEEE-
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCC------------------CcEEEEEEeCCCCEEEEE-
Confidence 46789999999999999987 5689999988776543322111 134578999999998865
Q ss_pred EcCCcceEE
Q psy7767 174 FNDARVHNM 182 (200)
Q Consensus 174 ~D~s~v~~~ 182 (200)
.+++.+..+
T Consensus 74 ~~dg~i~vw 82 (814)
T 3mkq_A 74 SDDFRIRVF 82 (814)
T ss_dssp ETTSEEEEE
T ss_pred eCCCeEEEE
Confidence 344444444
No 87
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.22 E-value=0.015 Score=49.98 Aligned_cols=86 Identities=12% Similarity=0.120 Sum_probs=52.0
Q ss_pred eEECcCCCEEEEEEc--CcEEEEECCCCCeEEEeeCCCcceEe-ccccccee------------------eeeeeCCCcc
Q psy7767 101 VQWSPVGHDLIFVKD--NNLYQAYDDFRSINALTRDGIKGVLF-NGVADWVY------------------EEEVFSSTKT 159 (200)
Q Consensus 101 ~~wSPDGk~IAFV~~--gdLyv~~~~~g~~~rLT~dg~~~~~~-nG~pdwv~------------------eEEi~~~~~~ 159 (200)
+.++|+|++|.|+.. ..||+++++++..++|+..+....+. .| .|++ ++.++.....
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~~~~~P~g--~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~ 227 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCYKPVVLDD--TNVYYMDVNRDNAIVHVNINNPNPVVLTEANI 227 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSCEEEEEEEET--TEEEEEEGGGTTEEEEECSSSCCCEECSCSCE
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCCccceeeecC--CEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc
Confidence 457899999999975 58999999988888886532211000 11 1111 0112333455
Q ss_pred eEEccCCCEEEEEEEcCCcceEEEEEeeCC
Q psy7767 160 LWFSPDGSILAYMKFNDARVHNMSYIHYGE 189 (200)
Q Consensus 160 ~~WSPDGk~Laf~r~D~s~v~~~~i~~~~~ 189 (200)
+||+|+|++|.|.. +.....++.+...+.
T Consensus 228 ~~~~~~g~~Iy~~~-~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 228 EHYNVYGSLIFYQR-GGDNPALCVVKNDGT 256 (302)
T ss_dssp EEEEEETTEEEEEE-CSSSCEEEEEETTSC
T ss_pred ceEEECCCEEEEEE-CCCCcEEEEEECCCC
Confidence 89999999996653 433445555555444
No 88
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.17 E-value=0.051 Score=47.79 Aligned_cols=69 Identities=26% Similarity=0.315 Sum_probs=46.4
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.||-.. ++.|.+.+..+.....+.... +....+.|||||++|+- .
T Consensus 467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~-------------------~~v~~l~~s~dg~~l~s-~ 526 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS-------------------SSVRGVAFSPDGQTIAS-A 526 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCS-------------------SCEEEEEECTTSSCEEE-E
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCC-------------------CCEEEEEEcCCCCEEEE-E
Confidence 46678999999999998875 457888886543333333211 12356899999998864 4
Q ss_pred EcCCcceEEE
Q psy7767 174 FNDARVHNMS 183 (200)
Q Consensus 174 ~D~s~v~~~~ 183 (200)
.+++.+..+.
T Consensus 527 ~~dg~v~lwd 536 (577)
T 2ymu_A 527 SDDKTVKLWN 536 (577)
T ss_dssp ETTSEEEEEC
T ss_pred ECcCEEEEEe
Confidence 5555565553
No 89
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.07 E-value=0.042 Score=46.13 Aligned_cols=72 Identities=22% Similarity=0.343 Sum_probs=47.3
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+..++|||||+.||-.. ++.+.+.++..+....+.. .+-. +....+.|||||+.|+-.
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~-----------------~~v~~v~~sp~~~~l~s~ 123 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHE-----------------NEVKSVAWAPSGNLLATC 123 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCS-----------------SCEEEEEECTTSSEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCC-----------------CCceEEEEeCCCCEEEEE
Confidence 45689999999999998876 5678887776654332222 1110 123578999999988754
Q ss_pred EEcCCcceEEEE
Q psy7767 173 KFNDARVHNMSY 184 (200)
Q Consensus 173 r~D~s~v~~~~i 184 (200)
..++.+..+.+
T Consensus 124 -s~D~~v~iwd~ 134 (345)
T 3fm0_A 124 -SRDKSVWVWEV 134 (345)
T ss_dssp -ETTSCEEEEEE
T ss_pred -ECCCeEEEEEC
Confidence 44555666654
No 90
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.02 E-value=0.067 Score=44.41 Aligned_cols=81 Identities=20% Similarity=0.130 Sum_probs=48.3
Q ss_pred CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCC-cceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGI-KGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL 169 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~-~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L 169 (200)
...+..++|+|||+.|+.... +.|.+.++..++..+...... ......+. +.. -+....+.|+|||+.|
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~v~~~~~~~~~~~l 306 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGE--FAH----SSWVMSLSFNDSGETL 306 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CC--BSB----SSCEEEEEECSSSSEE
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccc--ccc----CCcEEEEEECCCCCEE
Confidence 567899999999999988764 689999998776544332200 00000000 000 0133578999999987
Q ss_pred EEEEEcCCcceEE
Q psy7767 170 AYMKFNDARVHNM 182 (200)
Q Consensus 170 af~r~D~s~v~~~ 182 (200)
+.. ..++.+..+
T Consensus 307 ~~~-~~dg~i~iw 318 (397)
T 1sq9_A 307 CSA-GWDGKLRFW 318 (397)
T ss_dssp EEE-ETTSEEEEE
T ss_pred EEE-eCCCeEEEE
Confidence 654 444445444
No 91
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.00 E-value=0.031 Score=47.83 Aligned_cols=67 Identities=21% Similarity=0.143 Sum_probs=46.6
Q ss_pred CceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767 97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN 175 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D 175 (200)
.+..++|||||+.||... ++.|.+.++++++..+...... +....+.|+|||+.|+-. ..
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~------------------~~v~~~~~~p~~~~l~s~-s~ 185 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHE------------------QDIYSLDYFPSGDKLVSG-SG 185 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS------------------SCEEEEEECTTSSEEEEE-ET
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCC------------------CCEEEEEEcCCCCEEEEe-cC
Confidence 378999999999998875 5689999998776554433211 123468999999988644 44
Q ss_pred CCcceEE
Q psy7767 176 DARVHNM 182 (200)
Q Consensus 176 ~s~v~~~ 182 (200)
++.+..+
T Consensus 186 d~~v~iw 192 (393)
T 1erj_A 186 DRTVRIW 192 (393)
T ss_dssp TSEEEEE
T ss_pred CCcEEEE
Confidence 4555544
No 92
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.97 E-value=0.097 Score=43.61 Aligned_cols=75 Identities=12% Similarity=0.024 Sum_probs=50.9
Q ss_pred CCCceeeEECc-CCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+..++|+| ||+.|+... ++.|.+.++.+++......... +....+.|||||..+++.
T Consensus 262 ~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~------------------~~v~~~~~s~~~~~~l~s 323 (416)
T 2pm9_A 262 QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG------------------NWCFKTKFAPEAPDLFAC 323 (416)
T ss_dssp SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSS------------------SCCCCEEECTTCTTEEEE
T ss_pred cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCC------------------CceEEEEECCCCCCEEEE
Confidence 45678999999 888888775 5789999988776543332211 134578999999444445
Q ss_pred EEcCCcceEEEEEee
Q psy7767 173 KFNDARVHNMSYIHY 187 (200)
Q Consensus 173 r~D~s~v~~~~i~~~ 187 (200)
...++.+..+.+...
T Consensus 324 ~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 324 ASFDNKIEVQTLQNL 338 (416)
T ss_dssp CCSSSEEEEEESCCC
T ss_pred EecCCcEEEEEccCC
Confidence 555666777665443
No 93
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.96 E-value=0.21 Score=41.35 Aligned_cols=89 Identities=9% Similarity=-0.062 Sum_probs=51.7
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcce-----EecccccceeeeeeeCCCcceEEccCCC-
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGV-----LFNGVADWVYEEEVFSSTKTLWFSPDGS- 167 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~-----~~nG~pdwv~eEEi~~~~~~~~WSPDGk- 167 (200)
...+..+.|+|||+.|+... ++.|.+.++..++..+......... ..+|.. ...... -+....+.|+|||+
T Consensus 291 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~-~~~v~~~~~~~~g~~ 368 (397)
T 1sq9_A 291 SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDE-HGDSLA-EPGVFDVKFLKKGWR 368 (397)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCT-TSCBCS-SCCEEEEEEECTTTS
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccc-cccccc-CCceeEEEecccccc
Confidence 45678999999999988876 5689999998776554333110000 000000 000000 01345789999994
Q ss_pred --------EEEEEEEcCCcceEEEEE
Q psy7767 168 --------ILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 168 --------~Laf~r~D~s~v~~~~i~ 185 (200)
.+++....++.+..+.+.
T Consensus 369 ~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 369 SGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp BSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred ccccccccceEEEecCCCcEEEEEcC
Confidence 344456667777777654
No 94
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=95.94 E-value=0.023 Score=48.09 Aligned_cols=72 Identities=11% Similarity=-0.044 Sum_probs=43.9
Q ss_pred ceeeE-ECcCCCEEEEEE-c-C-----cEEEEECC-CCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEcc---
Q psy7767 98 LQLVQ-WSPVGHDLIFVK-D-N-----NLYQAYDD-FRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSP--- 164 (200)
Q Consensus 98 is~~~-wSPDGk~IAFV~-~-g-----dLyv~~~~-~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP--- 164 (200)
...++ |||||+.|+... + + .|.+.+++ +|+..++.. .+. .+ ....++.|||
T Consensus 256 ~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~-----~~-----------~~~~~~a~sp~~~ 319 (365)
T 1jof_A 256 RADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT-----PT-----------SGGHSNAVSPCPW 319 (365)
T ss_dssp EEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC-----SS-----------CCTTCCCEEECTT
T ss_pred cccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec-----CC-----------CCcccceecCCCc
Confidence 56788 999999985432 2 2 57777775 555544321 000 00 1234678999
Q ss_pred CCCEEEEEEEcCCcceEEEEE
Q psy7767 165 DGSILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 165 DGk~Laf~r~D~s~v~~~~i~ 185 (200)
||++|+....+...+.++.+.
T Consensus 320 dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 320 SDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp CTTEEEEECSSSCEEEEEEEE
T ss_pred CCCEEEEEEcCCCeEEEEEEc
Confidence 899987665555667766553
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.91 E-value=0.037 Score=46.08 Aligned_cols=70 Identities=10% Similarity=-0.069 Sum_probs=48.3
Q ss_pred CCCceeeEECcCCCEEEEE-EcCcEEEEECCCCCeE--EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSIN--ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY 171 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~~--rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf 171 (200)
...+..++|+|||+.||-. .++.|.+.++.++... .+.. +.. +....+.|||||+.|+-
T Consensus 170 ~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~-~h~-----------------~~v~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV-DEE-----------------AKIKEVKFADNGYWMVV 231 (343)
T ss_dssp SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC-CTT-----------------SCEEEEEECTTSSEEEE
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec-cCC-----------------CCEEEEEEeCCCCEEEE
Confidence 3458899999999998874 5778999999877654 2322 010 13457899999998876
Q ss_pred EEEcCCcceEEEE
Q psy7767 172 MKFNDARVHNMSY 184 (200)
Q Consensus 172 ~r~D~s~v~~~~i 184 (200)
.. ++ .+..+.+
T Consensus 232 ~~-~~-~v~iwd~ 242 (343)
T 3lrv_A 232 EC-DQ-TVVCFDL 242 (343)
T ss_dssp EE-SS-BEEEEET
T ss_pred Ee-CC-eEEEEEc
Confidence 55 44 5555543
No 96
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.90 E-value=0.045 Score=45.95 Aligned_cols=69 Identities=13% Similarity=-0.007 Sum_probs=47.4
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|+|||+.|+... ++.|.+.++..++..+...... +....+.|+|||+.|+..
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~------------------~~v~~~~~~~~~~~l~s~- 199 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHR------------------ATVTDIAIIDRGRNVLSA- 199 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCS------------------SCEEEEEEETTTTEEEEE-
T ss_pred cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCC------------------CcEEEEEEcCCCCEEEEE-
Confidence 56789999999999988776 4689999998765433222111 123568999999988754
Q ss_pred EcCCcceEE
Q psy7767 174 FNDARVHNM 182 (200)
Q Consensus 174 ~D~s~v~~~ 182 (200)
..++.+..+
T Consensus 200 ~~d~~v~iw 208 (420)
T 3vl1_A 200 SLDGTIRLW 208 (420)
T ss_dssp ETTSCEEEE
T ss_pred cCCCcEEEe
Confidence 444445544
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.85 E-value=0.11 Score=45.01 Aligned_cols=75 Identities=11% Similarity=0.072 Sum_probs=48.1
Q ss_pred CCCceeeEECcCCCEEEEEEc-CcEEEEECCCCCeEE-EeeCCCcceEecccccceeeeeeeCCCcceEEccC---CCEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSINA-LTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD---GSIL 169 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~~r-LT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD---Gk~L 169 (200)
...+..++|+|||+.|+.... +.|++.++.++.... .... ..|. .+....+.|||| |+.|
T Consensus 149 ~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~------~~~h---------~~~v~~~~~sp~~~~~~~l 213 (450)
T 2vdu_B 149 SKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEP------ILGH---------VSMLTDVHLIKDSDGHQFI 213 (450)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCC------SEEC---------SSCEEEEEEEECTTSCEEE
T ss_pred CCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccccccee------eecc---------cCceEEEEEcCCCCCCcEE
Confidence 456889999999999988864 789999887654321 0000 0010 013456899999 8766
Q ss_pred EEEEEcCCcceEEEEE
Q psy7767 170 AYMKFNDARVHNMSYI 185 (200)
Q Consensus 170 af~r~D~s~v~~~~i~ 185 (200)
+. ...++.+..+.+.
T Consensus 214 ~s-~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 214 IT-SDRDEHIKISHYP 228 (450)
T ss_dssp EE-EETTSCEEEEEES
T ss_pred EE-EcCCCcEEEEECC
Confidence 54 4555667766653
No 98
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.83 E-value=0.073 Score=44.25 Aligned_cols=77 Identities=9% Similarity=-0.069 Sum_probs=50.0
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
...+..++|||||+.|+-..++.|.+.++..+...+....-. + ++.--....+.|+|||++|+-...
T Consensus 214 ~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 214 EAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYT------I-------PEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp TSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCB------C------------CCEEEEECTTSSEEEEEET
T ss_pred CCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccc------c-------ccccccceEEEECCCCCEEEEecC
Confidence 467899999999999999998899999988664322111000 0 000001135899999999876544
Q ss_pred cCCcceEEEE
Q psy7767 175 NDARVHNMSY 184 (200)
Q Consensus 175 D~s~v~~~~i 184 (200)
.++.+..+.+
T Consensus 281 ~d~~i~v~~~ 290 (343)
T 3lrv_A 281 ESNSLTIYKF 290 (343)
T ss_dssp TTTEEEEEEE
T ss_pred CCCcEEEEEE
Confidence 3566666654
No 99
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.82 E-value=0.12 Score=43.72 Aligned_cols=74 Identities=18% Similarity=0.085 Sum_probs=49.0
Q ss_pred CCCceeeEECcCCCE-EEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc-CCCEEEE
Q psy7767 95 SNFLQLVQWSPVGHD-LIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP-DGSILAY 171 (200)
Q Consensus 95 ~~~is~~~wSPDGk~-IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP-DGk~Laf 171 (200)
...+..++|||||+. ||-.. ++.|.+.++++++..+..... +...++.||| ||+.|+
T Consensus 269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~-------------------~~V~~vafsP~d~~~l~- 328 (357)
T 4g56_B 269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHR-------------------DFVTGVAWSPLDHSKFT- 328 (357)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCS-------------------SCEEEEEECSSSTTEEE-
T ss_pred ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCC-------------------CCEEEEEEeCCCCCEEE-
Confidence 466889999999865 54443 578999998877655433211 1235789999 788776
Q ss_pred EEEcCCcceEEEEEeeC
Q psy7767 172 MKFNDARVHNMSYIHYG 188 (200)
Q Consensus 172 ~r~D~s~v~~~~i~~~~ 188 (200)
....++.+..+.++..+
T Consensus 329 s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 329 TVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEETTSCEEEEECC---
T ss_pred EEcCCCeEEEEECCCCC
Confidence 45666778888775543
No 100
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.80 E-value=0.061 Score=46.98 Aligned_cols=64 Identities=11% Similarity=0.123 Sum_probs=41.2
Q ss_pred ceeeEECcCCCEEEEEEc-----------CcEEEEECCCCCe-EEEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767 98 LQLVQWSPVGHDLIFVKD-----------NNLYQAYDDFRSI-NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD 165 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~~-----------gdLyv~~~~~g~~-~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD 165 (200)
.+.+.++|||+++..... ++|++.|+.+++. .+|. .|. ...++.||||
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~-------------------~p~~i~~s~D 328 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGH-------------------DVDAISVAQD 328 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCC-------------------CcCeEEECCC
Confidence 344678898887644332 4699998887765 3443 221 3567899999
Q ss_pred CCEEEEEEE-cCCcceE
Q psy7767 166 GSILAYMKF-NDARVHN 181 (200)
Q Consensus 166 Gk~Laf~r~-D~s~v~~ 181 (200)
|++++|+.. .++.+..
T Consensus 329 g~~~l~v~~~~~~~V~V 345 (373)
T 2mad_H 329 GGPDLYALSAGTEVLHI 345 (373)
T ss_pred CCeEEEEEcCCCCeEEE
Confidence 997778754 3443433
No 101
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.80 E-value=0.14 Score=42.57 Aligned_cols=71 Identities=17% Similarity=-0.035 Sum_probs=48.6
Q ss_pred CCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 96 NFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
..+..++|+|||+.|+... ++.|.+.++.+.....+.... +....+.|+|||+.+++...
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~-------------------~~v~~~~~~~~~~~~l~s~~ 224 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHK-------------------AKVTHAEFNPRCDWLMATSS 224 (383)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSS-------------------SCEEEEEECSSCTTEEEEEE
T ss_pred CCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCC-------------------CcEEEEEECCCCCCEEEEEe
Confidence 5578999999999988876 468999998544334443211 13457899999995555666
Q ss_pred cCCcceEEEEE
Q psy7767 175 NDARVHNMSYI 185 (200)
Q Consensus 175 D~s~v~~~~i~ 185 (200)
.++.+..+.+.
T Consensus 225 ~d~~i~iwd~~ 235 (383)
T 3ei3_B 225 VDATVKLWDLR 235 (383)
T ss_dssp TTSEEEEEEGG
T ss_pred CCCEEEEEeCC
Confidence 66666665543
No 102
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.77 E-value=0.1 Score=48.05 Aligned_cols=70 Identities=7% Similarity=-0.083 Sum_probs=49.5
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.|+... ++.|.+.++.+++..+...... +....+.|||||+.|+..
T Consensus 55 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~------------------~~v~~~~~s~~~~~l~~~- 115 (814)
T 3mkq_A 55 ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP------------------DYIRSIAVHPTKPYVLSG- 115 (814)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS------------------SCEEEEEECSSSSEEEEE-
T ss_pred CCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCC------------------CCEEEEEEeCCCCEEEEE-
Confidence 46789999999999999986 4689999998776543332111 134568999999988754
Q ss_pred EcCCcceEEE
Q psy7767 174 FNDARVHNMS 183 (200)
Q Consensus 174 ~D~s~v~~~~ 183 (200)
.+++.+..+.
T Consensus 116 ~~dg~i~vw~ 125 (814)
T 3mkq_A 116 SDDLTVKLWN 125 (814)
T ss_dssp ETTSEEEEEE
T ss_pred cCCCEEEEEE
Confidence 4445555443
No 103
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.72 E-value=0.041 Score=45.53 Aligned_cols=67 Identities=15% Similarity=0.136 Sum_probs=44.9
Q ss_pred CCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 96 NFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
..+..++|||||+.|+... ++.|.+.+..+.....+.... +....+.|+|||+.|+.. .
T Consensus 109 ~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l~~~-~ 168 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHR-------------------APIVSVKWNKDGTHIISM-D 168 (425)
T ss_dssp BCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCC-------------------SCEEEEEECTTSSEEEEE-E
T ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCC-------------------ccEEEEEECCCCCEEEEE-e
Confidence 4789999999999999886 467888885433333443211 133578999999988755 3
Q ss_pred cCCcceEE
Q psy7767 175 NDARVHNM 182 (200)
Q Consensus 175 D~s~v~~~ 182 (200)
.++.+..+
T Consensus 169 ~d~~i~iw 176 (425)
T 1r5m_A 169 VENVTILW 176 (425)
T ss_dssp TTCCEEEE
T ss_pred cCCeEEEE
Confidence 44444444
No 104
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.72 E-value=0.13 Score=42.71 Aligned_cols=81 Identities=14% Similarity=0.111 Sum_probs=51.1
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEE---EeeCCCcce-EecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINA---LTRDGIKGV-LFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~r---LT~dg~~~~-~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
+..+..++|+|||..++-..++.|.+.++.++.... +........ -..|. -+....+.|||||+.|+
T Consensus 255 ~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~sp~g~~l~ 325 (343)
T 2xzm_R 255 GSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGK---------NPQCTSLAWNALGKKLF 325 (343)
T ss_dssp SSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCS---------CCCEEEEEECSSSCCEE
T ss_pred CCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCC---------CCceEEEEECCCCCeEE
Confidence 456889999999999987778889999887654322 211110000 00000 01235789999999886
Q ss_pred EEEEcCCcceEEEEE
Q psy7767 171 YMKFNDARVHNMSYI 185 (200)
Q Consensus 171 f~r~D~s~v~~~~i~ 185 (200)
....++.+..+.+.
T Consensus 326 -sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 326 -AGFTDGVIRTFSFE 339 (343)
T ss_dssp -EEETTSEEEEEEEE
T ss_pred -EecCCceEEEEEEE
Confidence 45666777777654
No 105
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.72 E-value=0.073 Score=43.98 Aligned_cols=86 Identities=9% Similarity=-0.026 Sum_probs=48.0
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeE--EEeeCCCcceEecccccceeeeeee----C-CCcceEEccCC
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSIN--ALTRDGIKGVLFNGVADWVYEEEVF----S-STKTLWFSPDG 166 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~--rLT~dg~~~~~~nG~pdwv~eEEi~----~-~~~~~~WSPDG 166 (200)
...+..++|+|||+.|+... ++.|.+.++.++... .+..... .. .+-.+ ...-..+. + ....+.|||||
T Consensus 330 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-~~-~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~ 406 (425)
T 1r5m_A 330 GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRD-GI-LNPLP-IPLYASYQSSQDNDYIFDLSWNCAG 406 (425)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC----------------CEE-CCEEEEECCTTCCCCEEEEEECTTS
T ss_pred CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccc-cc-cCccc-chhhhhhcCcccCCceEEEEccCCC
Confidence 56789999999999998886 568999988765411 1110000 00 00000 00000000 1 34578999999
Q ss_pred CEEEEEEEcCCcceEEEE
Q psy7767 167 SILAYMKFNDARVHNMSY 184 (200)
Q Consensus 167 k~Laf~r~D~s~v~~~~i 184 (200)
+.|+.. ..++.+..+.+
T Consensus 407 ~~l~~~-~~dg~i~iw~~ 423 (425)
T 1r5m_A 407 NKISVA-YSLQEGSVVAI 423 (425)
T ss_dssp SEEEEE-ESSSCCEEEEC
T ss_pred ceEEEE-ecCceEEEEee
Confidence 988754 55566776654
No 106
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.71 E-value=0.19 Score=42.58 Aligned_cols=70 Identities=9% Similarity=-0.043 Sum_probs=47.4
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.|+-.. ++.|.+.++.+++..+...... +....+.|+|||+.++...
T Consensus 139 ~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~------------------~~v~~v~~s~~~~~~~~s~ 200 (357)
T 4g56_B 139 DDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHS------------------SEVNCVAACPGKDTIFLSC 200 (357)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCS------------------SCEEEEEECTTCSSCEEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC------------------CCEEEEEEccCCCceeeee
Confidence 45688999999999998765 5689999988776544332111 1234678999997655555
Q ss_pred EcCCcceEE
Q psy7767 174 FNDARVHNM 182 (200)
Q Consensus 174 ~D~s~v~~~ 182 (200)
..++.+..+
T Consensus 201 ~~dg~v~~w 209 (357)
T 4g56_B 201 GEDGRILLW 209 (357)
T ss_dssp ETTSCEEEC
T ss_pred ccCCceEEE
Confidence 555555544
No 107
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.69 E-value=0.043 Score=44.49 Aligned_cols=69 Identities=10% Similarity=0.063 Sum_probs=46.9
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCC----eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC-E
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRS----INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS-I 168 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~----~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk-~ 168 (200)
...+..++|+|||+.|+... ++.|.+.+++.+. ...+.... +....+.|+|||+ .
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~~ 71 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK-------------------HPLLCCNFIDNTDLQ 71 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECS-------------------SCEEEEEEEESSSEE
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecC-------------------CceEEEEECCCCCcE
Confidence 45789999999999998875 5678888887766 33222211 1345789999999 7
Q ss_pred EEEEEEcCCcceEEE
Q psy7767 169 LAYMKFNDARVHNMS 183 (200)
Q Consensus 169 Laf~r~D~s~v~~~~ 183 (200)
|+.. ..++.+..+.
T Consensus 72 l~~~-~~dg~i~~wd 85 (342)
T 1yfq_A 72 IYVG-TVQGEILKVD 85 (342)
T ss_dssp EEEE-ETTSCEEEEC
T ss_pred EEEE-cCCCeEEEEE
Confidence 7654 4445555543
No 108
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.60 E-value=0.28 Score=38.75 Aligned_cols=72 Identities=21% Similarity=0.224 Sum_probs=46.9
Q ss_pred CCCceeeEECc--CCCEEEEEE-cCcEEEEECCCCCe-------EEE-eeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767 95 SNFLQLVQWSP--VGHDLIFVK-DNNLYQAYDDFRSI-------NAL-TRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS 163 (200)
Q Consensus 95 ~~~is~~~wSP--DGk~IAFV~-~gdLyv~~~~~g~~-------~rL-T~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS 163 (200)
...+..++|+| ||+.|+... ++.|.+.++..+.. ..+ +..+. -+....+.|+
T Consensus 57 ~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~~~ 119 (351)
T 3f3f_A 57 DSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS-----------------KGSLYSVKFA 119 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCC-----------------SSCEEEEEEC
T ss_pred CCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeeccc-----------------CCceeEEEEc
Confidence 46789999999 699988876 56799988876542 111 11110 0134578899
Q ss_pred cC--CCEEEEEEEcCCcceEEEE
Q psy7767 164 PD--GSILAYMKFNDARVHNMSY 184 (200)
Q Consensus 164 PD--Gk~Laf~r~D~s~v~~~~i 184 (200)
|| |+.|+.. ..++.+..+.+
T Consensus 120 ~~~~~~~l~~~-~~dg~v~iwd~ 141 (351)
T 3f3f_A 120 PAHLGLKLACL-GNDGILRLYDA 141 (351)
T ss_dssp CGGGCSEEEEE-ETTCEEEEEEC
T ss_pred CCCCCcEEEEe-cCCCcEEEecC
Confidence 99 8877654 45555666654
No 109
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.58 E-value=0.074 Score=44.94 Aligned_cols=66 Identities=20% Similarity=0.004 Sum_probs=44.8
Q ss_pred CceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767 97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN 175 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D 175 (200)
.+..+.|||||+.|+-.. ++.|.+.++..+.......... +....+.|||||+.|+-. ..
T Consensus 286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~------------------~~v~~l~~spdg~~l~sg-s~ 346 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHE------------------NRVSTLRVSPDGTAFCSG-SW 346 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS------------------SCEEEEEECTTSSCEEEE-ET
T ss_pred ceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCC------------------CcEEEEEECCCCCEEEEE-cC
Confidence 467889999999987765 5689999987776543322111 133578999999988754 34
Q ss_pred CCcceE
Q psy7767 176 DARVHN 181 (200)
Q Consensus 176 ~s~v~~ 181 (200)
++.+.+
T Consensus 347 D~~v~v 352 (354)
T 2pbi_B 347 DHTLRV 352 (354)
T ss_dssp TSEEEE
T ss_pred CCCEEe
Confidence 444444
No 110
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.53 E-value=0.032 Score=45.29 Aligned_cols=71 Identities=11% Similarity=0.034 Sum_probs=47.7
Q ss_pred CCCceeeEECcCCCEEEEEE-----cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccC---C
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-----DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD---G 166 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-----~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD---G 166 (200)
...+..++|+|||+.++.+. ++.|.+.++++++...+...+.. +....+.|+|| |
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~ 80 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKA-----------------KPIKCGTFGATSLQQ 80 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEES-----------------SCEEEEECTTCCTTT
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeeccc-----------------CcEEEEEEcCCCCCC
Confidence 45789999999999888776 67899999988776544321110 12356889999 5
Q ss_pred CEEEEEEEcCCcceEEE
Q psy7767 167 SILAYMKFNDARVHNMS 183 (200)
Q Consensus 167 k~Laf~r~D~s~v~~~~ 183 (200)
+.|+.. ..++.+..+.
T Consensus 81 ~~l~~~-~~dg~i~iwd 96 (357)
T 3i2n_A 81 RYLATG-DFGGNLHIWN 96 (357)
T ss_dssp CCEEEE-ETTSCEEEEC
T ss_pred ceEEEe-cCCCeEEEEe
Confidence 766544 4445455443
No 111
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.51 E-value=0.085 Score=44.92 Aligned_cols=71 Identities=11% Similarity=-0.014 Sum_probs=49.5
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.|+-.. ++.|.+.++.+++..+.-.... +....+.|+|||+.++...
T Consensus 127 ~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~------------------~~V~~~~~~~~~~~~l~s~ 188 (344)
T 4gqb_B 127 DDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHA------------------AQVTCVAASPHKDSVFLSC 188 (344)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS------------------SCEEEEEECSSCTTEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcC------------------CceEEEEecCCCCCceeee
Confidence 45689999999999998875 5679999998776543332111 1234678999998766566
Q ss_pred EcCCcceEEE
Q psy7767 174 FNDARVHNMS 183 (200)
Q Consensus 174 ~D~s~v~~~~ 183 (200)
..++.+..+.
T Consensus 189 s~D~~v~iwd 198 (344)
T 4gqb_B 189 SEDNRILLWD 198 (344)
T ss_dssp ETTSCEEEEE
T ss_pred cccccccccc
Confidence 6666666553
No 112
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.47 E-value=0.078 Score=43.20 Aligned_cols=74 Identities=22% Similarity=0.181 Sum_probs=49.3
Q ss_pred CCCceeeEECcC---CCEEEEEE-cCcEEEEECCCCC---eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767 95 SNFLQLVQWSPV---GHDLIFVK-DNNLYQAYDDFRS---INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS 167 (200)
Q Consensus 95 ~~~is~~~wSPD---Gk~IAFV~-~gdLyv~~~~~g~---~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk 167 (200)
...+..++|+|| |+.|+... ++.|.+.++..+. ...+..... . -+....+.|||||+
T Consensus 206 ~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------~---------~~~v~~~~~s~~g~ 269 (379)
T 3jrp_A 206 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEK-------F---------PDVLWRASWSLSGN 269 (379)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSC-------C---------SSCEEEEEECSSSC
T ss_pred cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeecccc-------C---------CCcEEEEEEcCCCC
Confidence 456789999999 77777775 5678888887664 222222110 0 01335789999999
Q ss_pred EEEEEEEcCCcceEEEEE
Q psy7767 168 ILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 168 ~Laf~r~D~s~v~~~~i~ 185 (200)
.|+.. ..++.+..+.+.
T Consensus 270 ~l~~~-~~dg~i~iw~~~ 286 (379)
T 3jrp_A 270 VLALS-GGDNKVTLWKEN 286 (379)
T ss_dssp CEEEE-ESSSSEEEEEEE
T ss_pred EEEEe-cCCCcEEEEeCC
Confidence 88755 445677777766
No 113
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.46 E-value=0.32 Score=39.19 Aligned_cols=69 Identities=14% Similarity=0.089 Sum_probs=48.2
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEE--ccCCCEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF--SPDGSILAY 171 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W--SPDGk~Laf 171 (200)
...+..++|+|||+.|+-.. ++.|.+.+++++...++..... ....+.| +|||+.|+.
T Consensus 86 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-------------------~v~~~~~~~~~~~~~l~~ 146 (368)
T 3mmy_A 86 TGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDA-------------------PVKTIHWIKAPNYSCVMT 146 (368)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS-------------------CEEEEEEEECSSCEEEEE
T ss_pred cCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccC-------------------ceEEEEEEeCCCCCEEEE
Confidence 56789999999999998775 5689999998877665543221 2346788 999987754
Q ss_pred EEEcCCcceEEE
Q psy7767 172 MKFNDARVHNMS 183 (200)
Q Consensus 172 ~r~D~s~v~~~~ 183 (200)
. ..++.+..+.
T Consensus 147 ~-~~dg~i~vwd 157 (368)
T 3mmy_A 147 G-SWDKTLKFWD 157 (368)
T ss_dssp E-ETTSEEEEEC
T ss_pred c-cCCCcEEEEE
Confidence 4 4444444443
No 114
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.45 E-value=0.054 Score=49.41 Aligned_cols=71 Identities=14% Similarity=-0.016 Sum_probs=44.8
Q ss_pred CCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 96 NFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
..+..+++||||+.||-.. ++.|.+.++.++....+...+. + +....+.|||||++|+-. .
T Consensus 449 ~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h--------~---------~~v~~v~fspdg~~las~-s 510 (611)
T 1nr0_A 449 YNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH--------P---------AEITSVAFSNNGAFLVAT-D 510 (611)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEEC--------S---------SCEEEEEECTTSSEEEEE-E
T ss_pred CCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCC--------C---------CceEEEEECCCCCEEEEE-c
Confidence 3467789999999988776 4578888776654332221110 0 134578999999988744 4
Q ss_pred cCCcceEEEE
Q psy7767 175 NDARVHNMSY 184 (200)
Q Consensus 175 D~s~v~~~~i 184 (200)
.++.+..+.+
T Consensus 511 ~d~~v~~w~~ 520 (611)
T 1nr0_A 511 QSRKVIPYSV 520 (611)
T ss_dssp TTSCEEEEEG
T ss_pred CCCCEEEEEc
Confidence 4455555543
No 115
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.43 E-value=0.12 Score=42.78 Aligned_cols=59 Identities=17% Similarity=0.049 Sum_probs=42.8
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+..++|||||+.|+-.. ++.|.+.++..++......... ....+.|||||..|+..
T Consensus 196 ~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------------~v~~~~~sp~~~~la~~ 255 (319)
T 3frx_A 196 NSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD-------------------EVFSLAFSPNRYWLAAA 255 (319)
T ss_dssp CSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS-------------------CEEEEEECSSSSEEEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-------------------cEEEEEEcCCCCEEEEE
Confidence 45678999999999998775 5789999998766543322111 23468999999988754
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.43 E-value=0.24 Score=39.18 Aligned_cols=32 Identities=9% Similarity=0.126 Sum_probs=23.4
Q ss_pred CCCceeeEECcCC----CEEEEEE-cCcEEEEECCCC
Q psy7767 95 SNFLQLVQWSPVG----HDLIFVK-DNNLYQAYDDFR 126 (200)
Q Consensus 95 ~~~is~~~wSPDG----k~IAFV~-~gdLyv~~~~~g 126 (200)
...+..++|+|+| +.|+-.. ++.|.+.++..+
T Consensus 214 ~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 214 KSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp CSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred CcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 4678999999998 5555554 467888877654
No 117
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.40 E-value=0.15 Score=41.39 Aligned_cols=70 Identities=14% Similarity=0.019 Sum_probs=47.3
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|+|||+.|+... ++.|.+.++..++..+...... +....+.|+|||+.|+-.
T Consensus 65 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l~s~- 125 (312)
T 4ery_A 65 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS------------------NYVFCCNFNPQSNLIVSG- 125 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS------------------SCEEEEEECSSSSEEEEE-
T ss_pred CCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCC------------------CCEEEEEEcCCCCEEEEE-
Confidence 45688999999999998875 5689999998776544333211 123467899999877644
Q ss_pred EcCCcceEEE
Q psy7767 174 FNDARVHNMS 183 (200)
Q Consensus 174 ~D~s~v~~~~ 183 (200)
..++.+..+.
T Consensus 126 ~~d~~i~iwd 135 (312)
T 4ery_A 126 SFDESVRIWD 135 (312)
T ss_dssp ETTSCEEEEE
T ss_pred eCCCcEEEEE
Confidence 4444454443
No 118
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.39 E-value=0.1 Score=43.44 Aligned_cols=67 Identities=16% Similarity=-0.052 Sum_probs=45.4
Q ss_pred CceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767 97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN 175 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D 175 (200)
.+..++|||||+.|+-.. ++.|.+.++..+.....-.... +....+.|||||+.|+-. ..
T Consensus 272 ~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~------------------~~v~~~~~s~dg~~l~s~-s~ 332 (340)
T 1got_B 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD------------------NRVSCLGVTDDGMAVATG-SW 332 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS------------------SCEEEEEECTTSSCEEEE-ET
T ss_pred ceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCC------------------CcEEEEEEcCCCCEEEEE-cC
Confidence 578899999999988775 4679999987766543322111 123468999999988754 44
Q ss_pred CCcceEE
Q psy7767 176 DARVHNM 182 (200)
Q Consensus 176 ~s~v~~~ 182 (200)
++.+.++
T Consensus 333 D~~i~iW 339 (340)
T 1got_B 333 DSFLKIW 339 (340)
T ss_dssp TSCEEEE
T ss_pred CccEEec
Confidence 4545443
No 119
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.38 E-value=0.088 Score=43.02 Aligned_cols=72 Identities=18% Similarity=0.170 Sum_probs=50.9
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..+.|+|||+.|+... ++.|.+.++.+++......... .....+.|+|||+.|+- .
T Consensus 202 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l~~-~ 262 (372)
T 1k8k_C 202 CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET------------------LPLLAVTFITESSLVAA-G 262 (372)
T ss_dssp SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS------------------CCEEEEEEEETTEEEEE-E
T ss_pred CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCC------------------CCeEEEEEecCCCEEEE-E
Confidence 45688999999999988876 4679999998776544333221 12346899999986653 3
Q ss_pred EcCCcceEEEEEe
Q psy7767 174 FNDARVHNMSYIH 186 (200)
Q Consensus 174 ~D~s~v~~~~i~~ 186 (200)
.++.+..+.+..
T Consensus 263 -~d~~i~i~~~~~ 274 (372)
T 1k8k_C 263 -HDCFPVLFTYDS 274 (372)
T ss_dssp -TTSSCEEEEEET
T ss_pred -eCCeEEEEEccC
Confidence 667777777665
No 120
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.37 E-value=0.32 Score=39.26 Aligned_cols=72 Identities=14% Similarity=0.084 Sum_probs=50.3
Q ss_pred CCCceeeEECc-CCCEEEEEE-cCcEEEEECCCCCeEEEee--CCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDFRSINALTR--DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~g~~~rLT~--dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
...+..++|+| +|+.|+... ++.|.+.++..++...... .+.. +....+.|+|||+.|+
T Consensus 115 ~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~l~ 177 (366)
T 3k26_A 115 GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHR-----------------DEVLSADYDLLGEKIM 177 (366)
T ss_dssp CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCS-----------------SCEEEEEECTTSSEEE
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccccc-----------------CceeEEEECCCCCEEE
Confidence 56789999999 899888776 5789999998776654431 1110 1345789999999886
Q ss_pred EEEEcCCcceEEEE
Q psy7767 171 YMKFNDARVHNMSY 184 (200)
Q Consensus 171 f~r~D~s~v~~~~i 184 (200)
.. ..++.+..+.+
T Consensus 178 ~~-~~dg~i~i~d~ 190 (366)
T 3k26_A 178 SC-GMDHSLKLWRI 190 (366)
T ss_dssp EE-ETTSCEEEEES
T ss_pred Ee-cCCCCEEEEEC
Confidence 44 44556666654
No 121
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.34 E-value=0.1 Score=42.84 Aligned_cols=69 Identities=7% Similarity=-0.013 Sum_probs=46.4
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.|+-.. ++.|.+.+++++...+...... .....+.|+|||+.|+- .
T Consensus 13 ~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l~s-~ 73 (304)
T 2ynn_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTE------------------TPVRAGKFIARKNWIIV-G 73 (304)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS------------------SCEEEEEEEGGGTEEEE-E
T ss_pred CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccC------------------CcEEEEEEeCCCCEEEE-E
Confidence 45789999999999988775 5689999988776543322111 12346789999988764 3
Q ss_pred EcCCcceEE
Q psy7767 174 FNDARVHNM 182 (200)
Q Consensus 174 ~D~s~v~~~ 182 (200)
.+++.+..+
T Consensus 74 s~d~~i~vw 82 (304)
T 2ynn_A 74 SDDFRIRVF 82 (304)
T ss_dssp ETTSEEEEE
T ss_pred CCCCEEEEE
Confidence 444545444
No 122
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.33 E-value=0.082 Score=41.97 Aligned_cols=71 Identities=15% Similarity=0.104 Sum_probs=48.0
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
...+..++|+|||+.++-..++.|.+.++..++..+...... +....+.|+|||+.+ +..
T Consensus 225 ~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~------------------~~i~~~~~~~~~~~~--~~~ 284 (313)
T 3odt_A 225 ESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPA------------------ISIWSVDCMSNGDII--VGS 284 (313)
T ss_dssp SSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSS------------------SCEEEEEECTTSCEE--EEE
T ss_pred CceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccC------------------ceEEEEEEccCCCEE--EEe
Confidence 567899999999964433346789999998877654443221 123568999999833 356
Q ss_pred cCCcceEEEEE
Q psy7767 175 NDARVHNMSYI 185 (200)
Q Consensus 175 D~s~v~~~~i~ 185 (200)
.++.+..+.+.
T Consensus 285 ~dg~i~iw~~~ 295 (313)
T 3odt_A 285 SDNLVRIFSQE 295 (313)
T ss_dssp TTSCEEEEESC
T ss_pred CCCcEEEEeCC
Confidence 66667766644
No 123
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.33 E-value=0.11 Score=44.21 Aligned_cols=72 Identities=18% Similarity=0.066 Sum_probs=47.7
Q ss_pred ceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcC
Q psy7767 98 LQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFND 176 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~ 176 (200)
+..++|||+|+.|+-.. ++.|++.++..++...-...- .+|. -+....+.|||||+.|+ ....+
T Consensus 301 v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-----~~~h---------~~~v~~l~~s~dg~~l~-sgs~D 365 (380)
T 3iz6_a 301 VTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTL-----QNSH---------EGRISCLGLSSDGSALC-TGSWD 365 (380)
T ss_dssp CSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCS-----CSSC---------CCCCCEEEECSSSSEEE-EECTT
T ss_pred eEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecc-----cCCC---------CCceEEEEECCCCCEEE-EeeCC
Confidence 67899999999987764 568999998766654222100 0010 02456789999999886 44555
Q ss_pred CcceEEEE
Q psy7767 177 ARVHNMSY 184 (200)
Q Consensus 177 s~v~~~~i 184 (200)
+.+.++.+
T Consensus 366 ~~i~iW~~ 373 (380)
T 3iz6_a 366 KNLKIWAF 373 (380)
T ss_dssp SCEEEEEC
T ss_pred CCEEEEec
Confidence 66777654
No 124
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.33 E-value=0.072 Score=45.28 Aligned_cols=72 Identities=14% Similarity=0.086 Sum_probs=50.1
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.|+-.. ++.|.+.++.+++......... .....+.|||||+.|+- .
T Consensus 66 ~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~------------------~~v~~~~~s~~g~~las-~ 126 (380)
T 3iz6_a 66 SGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHC------------------PWVMECAFAPNGQSVAC-G 126 (380)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCC------------------TTCCCCEECTTSSEEEE-C
T ss_pred ccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCC------------------CCEEEEEECCCCCEEEE-e
Confidence 46789999999999988775 5689999988766543332111 12346789999998864 3
Q ss_pred EcCCcceEEEEE
Q psy7767 174 FNDARVHNMSYI 185 (200)
Q Consensus 174 ~D~s~v~~~~i~ 185 (200)
..++.+.++.+.
T Consensus 127 ~~d~~v~iw~~~ 138 (380)
T 3iz6_a 127 GLDSACSIFNLS 138 (380)
T ss_dssp CSSSCCEEEECC
T ss_pred eCCCcEEEEECC
Confidence 455667776654
No 125
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.32 E-value=0.008 Score=49.99 Aligned_cols=73 Identities=5% Similarity=-0.049 Sum_probs=46.4
Q ss_pred CCCceeeEECcCCCEEEEE-EcCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+..++|||||+.||.. .++.|.+.++.++....+.. .+. . +....+.|||||+.|+..
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h--------~---------~~v~~~~~s~~~~~l~s~ 73 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDH--------D---------KIVTCVDWAPKSNRIVTC 73 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCC--------S---------SCEEEEEECTTTCCEEEE
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecC--------C---------ceEEEEEEeCCCCEEEEE
Confidence 3568899999999999888 56778888877653222221 110 0 133578999999988755
Q ss_pred EEcCCcceEEEEE
Q psy7767 173 KFNDARVHNMSYI 185 (200)
Q Consensus 173 r~D~s~v~~~~i~ 185 (200)
..++.+..+.+.
T Consensus 74 -s~d~~v~vwd~~ 85 (377)
T 3dwl_C 74 -SQDRNAYVYEKR 85 (377)
T ss_dssp -ETTSSEEEC---
T ss_pred -eCCCeEEEEEcC
Confidence 444556655543
No 126
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.32 E-value=0.04 Score=46.28 Aligned_cols=72 Identities=7% Similarity=0.030 Sum_probs=48.2
Q ss_pred CCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 96 NFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
..+..++|||||+.|+... ++.|.+.++.++........+.. +....+.|+|||+.++++..
T Consensus 248 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~l~~g~ 310 (420)
T 3vl1_A 248 SKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT-----------------CSCNSLTVDGNNANYIYAGY 310 (420)
T ss_dssp CCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS-----------------SCEEEEEECSSCTTEEEEEE
T ss_pred CcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC-----------------CCceeEEEeCCCCCEEEEEe
Confidence 4456678899999998775 46799999987765443332210 13457899999994545666
Q ss_pred cCCcceEEEE
Q psy7767 175 NDARVHNMSY 184 (200)
Q Consensus 175 D~s~v~~~~i 184 (200)
.++.+..+.+
T Consensus 311 ~dg~i~vwd~ 320 (420)
T 3vl1_A 311 ENGMLAQWDL 320 (420)
T ss_dssp TTSEEEEEET
T ss_pred CCCeEEEEEc
Confidence 6666665543
No 127
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.27 E-value=0.12 Score=43.60 Aligned_cols=92 Identities=12% Similarity=0.148 Sum_probs=51.2
Q ss_pred CCCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcce--Eeccc-c--cceeeeeeeCCCcceEEccCC-
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGV--LFNGV-A--DWVYEEEVFSSTKTLWFSPDG- 166 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~--~~nG~-p--dwv~eEEi~~~~~~~~WSPDG- 166 (200)
....+..++|||||+.||... ++.|.+.++.++........+.... .+.|. + +++...++-+....+.|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 456789999999999999885 5789998887655211100000000 00010 0 001110111245689999998
Q ss_pred -CEEEEEEEcCCcceEEEEEe
Q psy7767 167 -SILAYMKFNDARVHNMSYIH 186 (200)
Q Consensus 167 -k~Laf~r~D~s~v~~~~i~~ 186 (200)
..|+ +...++.+..+.+..
T Consensus 107 ~~~l~-s~s~d~~i~iw~~~~ 126 (447)
T 3dw8_B 107 AAQFL-LSTNDKTIKLWKISE 126 (447)
T ss_dssp SSEEE-EEECSSCEEEEEEEE
T ss_pred cceEE-EeCCCCeEEEEeccc
Confidence 5665 446667788877654
No 128
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.15 E-value=0.17 Score=42.09 Aligned_cols=69 Identities=14% Similarity=-0.001 Sum_probs=46.3
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.|+-.. ++.|.+.++.++.......... +....+.|||||+.|+-.
T Consensus 55 ~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~------------------~~v~~~~~s~~~~~l~s~- 115 (340)
T 1got_B 55 LAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRS------------------SWVMTCAYAPSGNYVACG- 115 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS------------------SCEEEEEECTTSSEEEEE-
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCC------------------ccEEEEEECCCCCEEEEE-
Confidence 46789999999999987765 5689999988776543332211 123467899999988754
Q ss_pred EcCCcceEE
Q psy7767 174 FNDARVHNM 182 (200)
Q Consensus 174 ~D~s~v~~~ 182 (200)
..++.+..+
T Consensus 116 ~~d~~v~iw 124 (340)
T 1got_B 116 GLDNICSIY 124 (340)
T ss_dssp ETTCEEEEE
T ss_pred eCCCeEEEE
Confidence 334444444
No 129
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.14 E-value=0.13 Score=43.57 Aligned_cols=71 Identities=14% Similarity=0.071 Sum_probs=48.4
Q ss_pred CceeeEECcCCCEEEEE----EcCcEEEEECCCCCe-EEEee-CCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 97 FLQLVQWSPVGHDLIFV----KDNNLYQAYDDFRSI-NALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV----~~gdLyv~~~~~g~~-~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
.+..+.|+|||+.|+.. .++.|.+.++.++.. ..+.. +.. .....+.|||||+.|+
T Consensus 222 ~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------------------~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 222 RPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS------------------SGVLLPFFDPDTNIVY 283 (402)
T ss_dssp SCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCC------------------SSCEEEEEETTTTEEE
T ss_pred cceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCC------------------CceeEEEEcCCCCEEE
Confidence 36889999999988876 467899999886543 11211 111 1345689999999887
Q ss_pred EEEEcCCcceEEEEE
Q psy7767 171 YMKFNDARVHNMSYI 185 (200)
Q Consensus 171 f~r~D~s~v~~~~i~ 185 (200)
.....++.+..+.+.
T Consensus 284 ~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 284 LCGKGDSSIRYFEIT 298 (402)
T ss_dssp EEETTCSCEEEEEEC
T ss_pred EEEcCCCeEEEEEec
Confidence 665556667666654
No 130
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.07 E-value=0.16 Score=42.27 Aligned_cols=71 Identities=14% Similarity=0.003 Sum_probs=48.8
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|+|||+.|+-.. ++.|.+.++.+++..+...... +....+.|||||+.|+- .
T Consensus 76 ~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~------------------~~v~~v~~sp~~~~l~s-~ 136 (343)
T 2xzm_R 76 NHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ------------------SEVYSVAFSPDNRQILS-A 136 (343)
T ss_dssp SSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCC------------------SCEEEEEECSSTTEEEE-E
T ss_pred CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC------------------CcEEEEEECCCCCEEEE-E
Confidence 45689999999999987664 5689999998776543222111 12346899999998864 4
Q ss_pred EcCCcceEEEE
Q psy7767 174 FNDARVHNMSY 184 (200)
Q Consensus 174 ~D~s~v~~~~i 184 (200)
..++.+..+.+
T Consensus 137 ~~d~~i~~wd~ 147 (343)
T 2xzm_R 137 GAEREIKLWNI 147 (343)
T ss_dssp ETTSCEEEEES
T ss_pred cCCCEEEEEec
Confidence 55566666654
No 131
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.02 E-value=0.21 Score=40.34 Aligned_cols=70 Identities=10% Similarity=-0.041 Sum_probs=49.0
Q ss_pred CCCceeeEECcCCC-EEEEEE-cCcEEEEEC-CCCCeEEEee--CCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767 95 SNFLQLVQWSPVGH-DLIFVK-DNNLYQAYD-DFRSINALTR--DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL 169 (200)
Q Consensus 95 ~~~is~~~wSPDGk-~IAFV~-~gdLyv~~~-~~g~~~rLT~--dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L 169 (200)
...+..++|+|||+ .|+... ++.|.+.++ .++....+.. .. +....+.|+| ++.|
T Consensus 56 ~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~-------------------~~v~~l~~~~-~~~l 115 (342)
T 1yfq_A 56 KHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEAN-------------------LGICRICKYG-DDKL 115 (342)
T ss_dssp SSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCC-------------------SCEEEEEEET-TTEE
T ss_pred CCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCC-------------------CceEEEEeCC-CCEE
Confidence 46789999999999 887775 578999999 8777655543 11 1234688999 8877
Q ss_pred EEEEEcCCcceEEEEE
Q psy7767 170 AYMKFNDARVHNMSYI 185 (200)
Q Consensus 170 af~r~D~s~v~~~~i~ 185 (200)
+. ...++.+..+.+.
T Consensus 116 ~s-~~~d~~i~iwd~~ 130 (342)
T 1yfq_A 116 IA-ASWDGLIEVIDPR 130 (342)
T ss_dssp EE-EETTSEEEEECHH
T ss_pred EE-EcCCCeEEEEccc
Confidence 64 4555556655443
No 132
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.00 E-value=0.03 Score=46.42 Aligned_cols=68 Identities=16% Similarity=0.215 Sum_probs=41.5
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCC----eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRS----INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL 169 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~----~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L 169 (200)
...+..++|+|||+.|+... ++.|.+.++.++. ...+.... +....+.|+|||+.|
T Consensus 55 ~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l 115 (377)
T 3dwl_C 55 DKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN-------------------RAATFVRWSPNEDKF 115 (377)
T ss_dssp SSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCS-------------------SCEEEEECCTTSSCC
T ss_pred CceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccC-------------------CceEEEEECCCCCEE
Confidence 45689999999999998886 5789998887765 11111111 133568899999988
Q ss_pred EEEEEcCCcceEE
Q psy7767 170 AYMKFNDARVHNM 182 (200)
Q Consensus 170 af~r~D~s~v~~~ 182 (200)
+.... ++.+..+
T Consensus 116 ~~~~~-d~~i~iw 127 (377)
T 3dwl_C 116 AVGSG-ARVISVC 127 (377)
T ss_dssp EEEES-SSCEEEC
T ss_pred EEEec-CCeEEEE
Confidence 76543 3444443
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.95 E-value=0.46 Score=43.39 Aligned_cols=73 Identities=12% Similarity=0.057 Sum_probs=45.8
Q ss_pred eecCCCCCceeeEECcCCCEEEEEE-cCcEEEEEC--CCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc--
Q psy7767 90 SDLDGSNFLQLVQWSPVGHDLIFVK-DNNLYQAYD--DFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP-- 164 (200)
Q Consensus 90 ~~lt~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~--~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP-- 164 (200)
..+..+.....+++||||+.|+-.. ++.|.+.++ .+++..+-...|. ...++.|||
T Consensus 173 ~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~-------------------~p~~va~sp~~ 233 (543)
T 1nir_A 173 KVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI-------------------EARSVESSKFK 233 (543)
T ss_dssp EEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS-------------------EEEEEEECCST
T ss_pred EEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCC-------------------CcceEEeCCCc
Confidence 3343344477889999999986664 457999998 5554432222221 234688999
Q ss_pred --CCCEEEEEEEcCCcceE
Q psy7767 165 --DGSILAYMKFNDARVHN 181 (200)
Q Consensus 165 --DGk~Laf~r~D~s~v~~ 181 (200)
||++|+.....+..+.+
T Consensus 234 ~~dg~~l~v~~~~~~~v~v 252 (543)
T 1nir_A 234 GYEDRYTIAGAYWPPQFAI 252 (543)
T ss_dssp TCTTTEEEEEEEESSEEEE
T ss_pred CCCCCEEEEEEccCCeEEE
Confidence 99988655444444433
No 134
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=94.89 E-value=0.16 Score=43.48 Aligned_cols=69 Identities=10% Similarity=-0.009 Sum_probs=41.0
Q ss_pred ecCCCCCceeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCc
Q psy7767 91 DLDGSNFLQLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTK 158 (200)
Q Consensus 91 ~lt~~~~is~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~ 158 (200)
.+..+... .+++||||+.+.-+. ++.|.+.++.+++.. .+.-.+.. ...| ....
T Consensus 46 ~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~--~~~g-----------~~p~ 111 (361)
T 2oiz_A 46 MVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR--VQGL-----------NYDG 111 (361)
T ss_dssp EEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB--CCBC-----------CCGG
T ss_pred EecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc--cccC-----------CCcc
Confidence 33333334 889999999976553 234888888776654 33321110 0001 1356
Q ss_pred ceEEccCCCEEEEEE
Q psy7767 159 TLWFSPDGSILAYMK 173 (200)
Q Consensus 159 ~~~WSPDGk~Laf~r 173 (200)
.+.+||||++|+-..
T Consensus 112 ~i~~spdg~~l~v~n 126 (361)
T 2oiz_A 112 LFRQTTDGKFIVLQN 126 (361)
T ss_dssp GEEECTTSSEEEEEE
T ss_pred eEEECCCCCEEEEEC
Confidence 789999999875443
No 135
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=94.81 E-value=0.085 Score=50.21 Aligned_cols=70 Identities=19% Similarity=0.332 Sum_probs=45.6
Q ss_pred CceeeEECcCCCEEEEEE-cCcEEEEECCCCCe--------EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767 97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSI--------NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS 167 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~--------~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk 167 (200)
.+..++|||||+.||-.. +|.|-+.++.++.. ..+.... .|..+|+ ..+.|||||
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~------~gh~~~V---------~sVawSPdg- 194 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD------AGSKDWV---------THIVWYEDV- 194 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC------TTCCCCE---------EEEEEETTE-
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc------ccccccE---------EEEEEcCCc-
Confidence 588999999999999997 57888889887642 2222111 1222344 368999999
Q ss_pred EEEEEEEcCCcceEEEE
Q psy7767 168 ILAYMKFNDARVHNMSY 184 (200)
Q Consensus 168 ~Laf~r~D~s~v~~~~i 184 (200)
|+-. ..++.+..+.+
T Consensus 195 -Laas-s~D~tVrlWd~ 209 (588)
T 2j04_A 195 -LVAA-LSNNSVFSMTV 209 (588)
T ss_dssp -EEEE-ETTCCEEEECC
T ss_pred -EEEE-eCCCeEEEEEC
Confidence 5433 44455665543
No 136
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.76 E-value=0.29 Score=44.98 Aligned_cols=89 Identities=17% Similarity=0.084 Sum_probs=52.2
Q ss_pred CCCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEE-EeeCCCcce--EecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINA-LTRDGIKGV--LFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~r-LT~dg~~~~--~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
....+..+.|||||..|+-..++.|.+.++.++...+ +..+..... ..+..+.-. ... .....++.|||||+.|+
T Consensus 601 ~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~l~~spdg~~l~ 678 (694)
T 3dm0_A 601 ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAAT-KRK-VIYCTSLNWSADGSTLF 678 (694)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC-----------------C-CCCEEEEEECTTSSEEE
T ss_pred CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccC-Cce-eEEeeeEEEcCCCCEEE
Confidence 3556789999999999998888899999998776543 221111000 000000000 000 00135689999999886
Q ss_pred EEEEcCCcceEEEEE
Q psy7767 171 YMKFNDARVHNMSYI 185 (200)
Q Consensus 171 f~r~D~s~v~~~~i~ 185 (200)
....++.+..+.+.
T Consensus 679 -sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 679 -SGYTDGVIRVWGIG 692 (694)
T ss_dssp -EEETTSEEEEEEC-
T ss_pred -EEcCCCeEEEEecc
Confidence 55666777777653
No 137
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.65 E-value=0.16 Score=41.33 Aligned_cols=73 Identities=14% Similarity=0.068 Sum_probs=47.2
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccC--CCEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD--GSILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD--Gk~La 170 (200)
...+..++|||||+.||... ++.|.+.+++.+....+.. .+.. +....+.|+|+ |+.|+
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~-----------------~~v~~~~~~~~~~~~~l~ 73 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHE-----------------GPVWRVDWAHPKFGTILA 73 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCS-----------------SCEEEEEECCGGGCSEEE
T ss_pred cccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCC-----------------CcEEEEEeCCCCCCCEEE
Confidence 46789999999999999885 6778888886443332221 1110 12356889988 87765
Q ss_pred EEEEcCCcceEEEEE
Q psy7767 171 YMKFNDARVHNMSYI 185 (200)
Q Consensus 171 f~r~D~s~v~~~~i~ 185 (200)
- ...++.+..+.+.
T Consensus 74 s-~~~dg~v~iwd~~ 87 (379)
T 3jrp_A 74 S-CSYDGKVLIWKEE 87 (379)
T ss_dssp E-EETTSCEEEEEEE
T ss_pred E-eccCCEEEEEEcC
Confidence 4 4555666666543
No 138
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.61 E-value=0.087 Score=44.45 Aligned_cols=78 Identities=4% Similarity=0.000 Sum_probs=48.3
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCC-CCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCC-CEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDF-RSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG-SILAYM 172 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~-g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG-k~Laf~ 172 (200)
...+..++|+|||+.|+-..++.|.+.++.. +...++..-.... ..+.. +....+.|+||| +.|+ .
T Consensus 177 ~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~---------~~v~~~~~~p~~~~~l~-s 244 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPAN--MEELT---------EVITAAEFHPNSCNTFV-Y 244 (447)
T ss_dssp SSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSS--GGGCC---------CCEEEEEECSSCTTEEE-E
T ss_pred CcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeeccccc--ccccC---------cceEEEEECCCCCcEEE-E
Confidence 4668999999999999988778899999873 3333322100000 00100 134578999999 6665 4
Q ss_pred EEcCCcceEEEE
Q psy7767 173 KFNDARVHNMSY 184 (200)
Q Consensus 173 r~D~s~v~~~~i 184 (200)
...++.+..+.+
T Consensus 245 ~~~dg~i~iwd~ 256 (447)
T 3dw8_B 245 SSSKGTIRLCDM 256 (447)
T ss_dssp EETTSCEEEEET
T ss_pred EeCCCeEEEEEC
Confidence 455555666553
No 139
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.60 E-value=0.11 Score=42.55 Aligned_cols=59 Identities=15% Similarity=0.229 Sum_probs=36.8
Q ss_pred CCceeeEECcCCCEEEEEEc-------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767 96 NFLQLVQWSPVGHDLIFVKD-------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI 168 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~~-------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~ 168 (200)
..+..+.++|||+..+-... +.||..+.++++...+... +....++.|+|||+.
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------------------~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-------------------ISVANGIALSTDEKV 195 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-------------------ESSEEEEEECTTSSE
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-------------------CCcccceEECCCCCE
Confidence 34677889999864332221 4688877666555555431 113456889999988
Q ss_pred EEEEE
Q psy7767 169 LAYMK 173 (200)
Q Consensus 169 Laf~r 173 (200)
|++..
T Consensus 196 l~v~~ 200 (333)
T 2dg1_A 196 LWVTE 200 (333)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76553
No 140
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.60 E-value=0.3 Score=40.52 Aligned_cols=72 Identities=19% Similarity=0.196 Sum_probs=45.1
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCC-CCe-EEEee-CCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDF-RSI-NALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~-g~~-~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
...+..++|||||+.||-.. ++.|.+.++.. +.. ..+.. .+- . .....+.|+|||+.|+
T Consensus 107 ~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h--------~---------~~v~~v~~~p~~~~l~ 169 (330)
T 2hes_X 107 ENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH--------S---------QDVKHVIWHPSEALLA 169 (330)
T ss_dssp --CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC--------S---------SCEEEEEECSSSSEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC--------C---------CceEEEEECCCCCEEE
Confidence 45688999999999998775 57899988843 221 11111 110 0 1235689999999776
Q ss_pred EEEEcCCcceEEEE
Q psy7767 171 YMKFNDARVHNMSY 184 (200)
Q Consensus 171 f~r~D~s~v~~~~i 184 (200)
- ...++.+..+.+
T Consensus 170 s-~s~D~~i~iW~~ 182 (330)
T 2hes_X 170 S-SSYDDTVRIWKD 182 (330)
T ss_dssp E-EETTSCEEEEEE
T ss_pred E-EcCCCeEEEEEC
Confidence 4 455556666643
No 141
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.54 E-value=0.19 Score=48.90 Aligned_cols=69 Identities=16% Similarity=0.052 Sum_probs=48.2
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.||... ++.|.+.++.+++..+...... +....+.|||||+.|+-.
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~------------------~~v~~~~~s~~~~~l~s~- 675 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHE------------------DEVLCCAFSSDDSYIATC- 675 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS------------------SCEEEEEECTTSSEEEEE-
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCC------------------CCEEEEEEecCCCEEEEE-
Confidence 46789999999999998875 5689999998876543332111 123568999999988755
Q ss_pred EcCCcceEE
Q psy7767 174 FNDARVHNM 182 (200)
Q Consensus 174 ~D~s~v~~~ 182 (200)
..++.+.++
T Consensus 676 ~~d~~v~vw 684 (1249)
T 3sfz_A 676 SADKKVKIW 684 (1249)
T ss_dssp ETTSEEEEE
T ss_pred eCCCeEEEE
Confidence 344444444
No 142
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.53 E-value=0.43 Score=41.10 Aligned_cols=84 Identities=15% Similarity=0.157 Sum_probs=49.9
Q ss_pred CCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEee---CCCcce-E-ecccccceeeeeeeCCCcceEEccCCC
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTR---DGIKGV-L-FNGVADWVYEEEVFSSTKTLWFSPDGS 167 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~---dg~~~~-~-~nG~pdwv~eEEi~~~~~~~~WSPDGk 167 (200)
...+..++|+|+|+.+..+. ++.|.+.++......+... ++.... . ..|. -+....+.|+|+|+
T Consensus 321 ~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h---------~~~v~~~~~~p~~~ 391 (430)
T 2xyi_A 321 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH---------TAKISDFSWNPNEP 391 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCC---------SSCEEEEEECSSST
T ss_pred CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCC---------CCCceEEEECCCCC
Confidence 46789999999998755554 4678888876522111000 000000 0 0000 01346789999999
Q ss_pred EEEEEEEcCCcceEEEEEee
Q psy7767 168 ILAYMKFNDARVHNMSYIHY 187 (200)
Q Consensus 168 ~Laf~r~D~s~v~~~~i~~~ 187 (200)
.++....+++.+.++.+...
T Consensus 392 ~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 392 WIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TEEEEEETTSEEEEEEECHH
T ss_pred CEEEEEECCCCEEEeEcccc
Confidence 66666677788888887644
No 143
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.53 E-value=0.26 Score=41.51 Aligned_cols=71 Identities=10% Similarity=0.045 Sum_probs=47.3
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|+|||+.||-.. ++.|.+.+..++.......... .....+.|||||+.|+-.
T Consensus 64 ~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~------------------~~v~~~~~sp~g~~lasg- 124 (354)
T 2pbi_B 64 GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPC------------------TWVMACAYAPSGCAIACG- 124 (354)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS------------------SCCCEEEECTTSSEEEEE-
T ss_pred CCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCC------------------CCEEEEEECCCCCEEEEe-
Confidence 46789999999999987765 5678888887665543332221 124578999999988743
Q ss_pred EcCCcceEEEE
Q psy7767 174 FNDARVHNMSY 184 (200)
Q Consensus 174 ~D~s~v~~~~i 184 (200)
..++.+..+.+
T Consensus 125 ~~d~~i~v~~~ 135 (354)
T 2pbi_B 125 GLDNKCSVYPL 135 (354)
T ss_dssp STTSEEEEEEC
T ss_pred eCCCCEEEEEE
Confidence 33444444443
No 144
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.44 E-value=0.14 Score=43.29 Aligned_cols=70 Identities=9% Similarity=-0.002 Sum_probs=46.5
Q ss_pred CCCceeeEECc-CCCEEEEEE-cCcEEEEECCCCCe--------EEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767 95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDFRSI--------NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP 164 (200)
Q Consensus 95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~g~~--------~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP 164 (200)
...+..++|+| +|+.|+-.. ++.|.+.++..+.. ..+.... +....+.|+|
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~-------------------~~v~~~~~~p 141 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT-------------------KRVGIVAWHP 141 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS-------------------SCEEEEEECS
T ss_pred CCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC-------------------CeEEEEEECc
Confidence 46789999999 888887775 56799998887631 1222111 1345689999
Q ss_pred CCCEEEEEEEcCCcceEEE
Q psy7767 165 DGSILAYMKFNDARVHNMS 183 (200)
Q Consensus 165 DGk~Laf~r~D~s~v~~~~ 183 (200)
||+.+++....++.+.++.
T Consensus 142 ~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 142 TAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp SBTTEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEcCCCEEEEEE
Confidence 9965555666666565554
No 145
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.29 E-value=0.39 Score=42.02 Aligned_cols=71 Identities=14% Similarity=0.179 Sum_probs=49.9
Q ss_pred CCCceeeEECc----------CCCEEEEEE-cCcEEEEECCCCC-eEEEeeCCCcceEecccccceeeeeeeCCCcceEE
Q psy7767 95 SNFLQLVQWSP----------VGHDLIFVK-DNNLYQAYDDFRS-INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF 162 (200)
Q Consensus 95 ~~~is~~~wSP----------DGk~IAFV~-~gdLyv~~~~~g~-~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W 162 (200)
...+..++||| ||+.||... ++.|++.+++++. ..+... +.. +....+.|
T Consensus 531 ~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~h~-----------------~~v~~l~~ 592 (615)
T 1pgu_A 531 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN-AHK-----------------DGVNNLLW 592 (615)
T ss_dssp SSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETT-SST-----------------TCEEEEEE
T ss_pred CCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhh-cCc-----------------cceEEEEE
Confidence 45689999999 999999886 5689999998763 322221 110 13457899
Q ss_pred ccCCCEEEEEEEcCCcceEEEEE
Q psy7767 163 SPDGSILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 163 SPDGk~Laf~r~D~s~v~~~~i~ 185 (200)
||||+ |+ ....++.+..+.+.
T Consensus 593 s~~~~-l~-s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 593 ETPST-LV-SSGADACIKRWNVV 613 (615)
T ss_dssp EETTE-EE-EEETTSCEEEEEEC
T ss_pred cCCCC-eE-EecCCceEEEEeee
Confidence 99998 64 55666777777653
No 146
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=94.29 E-value=0.14 Score=45.28 Aligned_cols=69 Identities=14% Similarity=0.162 Sum_probs=44.8
Q ss_pred CCCceeeEECcC-CCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 95 SNFLQLVQWSPV-GHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 95 ~~~is~~~wSPD-Gk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
+..+..++|+|+ ++.||-.. ++.|.+.++..+.... ...+.. .....+.|||||++|+-.
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~-~~~~~~-----------------~~v~~v~wspdg~~lasg 210 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVC-ATLPST-----------------VAVTSVCWSPKGKQLAVG 210 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEE-EEECGG-----------------GCEEEEEECTTSSCEEEE
T ss_pred CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCccee-eccCCC-----------------CceeEEEEcCCCCEEEEE
Confidence 456899999998 67777654 6789999988763322 211100 134578999999988754
Q ss_pred EEcCCcceEE
Q psy7767 173 KFNDARVHNM 182 (200)
Q Consensus 173 r~D~s~v~~~ 182 (200)
. .++.+.++
T Consensus 211 s-~dg~v~iw 219 (434)
T 2oit_A 211 K-QNGTVVQY 219 (434)
T ss_dssp E-TTSCEEEE
T ss_pred c-CCCcEEEE
Confidence 3 44445444
No 147
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.28 E-value=0.18 Score=41.49 Aligned_cols=45 Identities=9% Similarity=0.158 Sum_probs=30.8
Q ss_pred ceeecCCC-CCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEee
Q psy7767 88 DVSDLDGS-NFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTR 133 (200)
Q Consensus 88 ~v~~lt~~-~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~ 133 (200)
.++.+..+ .....|.|+|||+.|.|+- ++.|+..+. ++....+..
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~ 83 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLD 83 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeC
Confidence 55555543 3447899999999998885 467888877 455544443
No 148
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.22 E-value=0.58 Score=45.58 Aligned_cols=68 Identities=18% Similarity=0.196 Sum_probs=49.0
Q ss_pred CceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcC
Q psy7767 97 FLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFND 176 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~ 176 (200)
.+...+|||||+.++...++.+.+.++.++........+.. +....+.|||||+.|+.. ..+
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~-----------------~~v~~~~~sp~~~~l~~~-~~d 861 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH-----------------STIQYCDFSPYDHLAVIA-LSQ 861 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSS-----------------SCCCEEEECSSTTEEEEE-CSS
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCC-----------------CceEEEEEcCCCCEEEEE-eCC
Confidence 56788999999999999999999999988776554443321 245678999999987654 333
Q ss_pred CcceEE
Q psy7767 177 ARVHNM 182 (200)
Q Consensus 177 s~v~~~ 182 (200)
+.+..+
T Consensus 862 g~v~vw 867 (1249)
T 3sfz_A 862 YCVELW 867 (1249)
T ss_dssp SCEEEE
T ss_pred CeEEEE
Confidence 334433
No 149
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.18 E-value=0.2 Score=41.59 Aligned_cols=78 Identities=8% Similarity=-0.051 Sum_probs=47.3
Q ss_pred CCCceeeEECcCC-CEEEEE-EcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 95 SNFLQLVQWSPVG-HDLIFV-KDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 95 ~~~is~~~wSPDG-k~IAFV-~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+..++|+|+| +.++-. .++.|.+.++..++.......... ..|.. .....+.|+|||..+++.
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~---------~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSP---NSGIK---------QQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCC---SSCCC---------CCEEEEEECSSCTTEEEE
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccc---ccccC---------CceEEEEECCCCCCEEEE
Confidence 4567899999995 555443 356899999987765443332110 00000 134578999999655556
Q ss_pred EEcCC---cceEEEE
Q psy7767 173 KFNDA---RVHNMSY 184 (200)
Q Consensus 173 r~D~s---~v~~~~i 184 (200)
..+++ .+..+.+
T Consensus 233 ~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 233 ATGSDNDPSILIWDL 247 (416)
T ss_dssp EECCSSSCCCCEEET
T ss_pred EECCCCCceEEEEeC
Confidence 55555 5666654
No 150
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.16 E-value=0.41 Score=43.31 Aligned_cols=72 Identities=10% Similarity=-0.078 Sum_probs=43.1
Q ss_pred ceeecCCCCCceeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeC
Q psy7767 88 DVSDLDGSNFLQLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFS 155 (200)
Q Consensus 88 ~v~~lt~~~~is~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~ 155 (200)
-+..+..+... .+.+||||+++.... ++.|.+.|..+++.. .|.-.+.+.. .-| .
T Consensus 111 vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~-~~g-----------~ 177 (426)
T 3c75_H 111 ILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRF-LVG-----------T 177 (426)
T ss_dssp EEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC-CBS-----------C
T ss_pred EEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccc-ccC-----------C
Confidence 34444444445 899999999975543 246888888877654 3332211100 000 1
Q ss_pred CCcceEEccCCCEEEEE
Q psy7767 156 STKTLWFSPDGSILAYM 172 (200)
Q Consensus 156 ~~~~~~WSPDGk~Laf~ 172 (200)
...++.+||||++|+..
T Consensus 178 ~P~~~~~spDGk~lyV~ 194 (426)
T 3c75_H 178 YQWMNALTPDNKNLLFY 194 (426)
T ss_dssp CGGGSEECTTSSEEEEE
T ss_pred CcceEEEcCCCCEEEEE
Confidence 34578999999987544
No 151
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.14 E-value=0.34 Score=39.57 Aligned_cols=70 Identities=7% Similarity=-0.069 Sum_probs=48.4
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+...+|+|||+.|+-.. ++.|.+.++.+++..+...... +....+.|+|||+.|+ ..
T Consensus 55 ~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~------------------~~v~~~~~~~~~~~l~-sg 115 (304)
T 2ynn_A 55 ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP------------------DYIRSIAVHPTKPYVL-SG 115 (304)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS------------------SCEEEEEECSSSSEEE-EE
T ss_pred CCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCC------------------CcEEEEEEcCCCCEEE-EE
Confidence 35678899999999988775 4679999998776543332111 1234688999998776 45
Q ss_pred EcCCcceEEE
Q psy7767 174 FNDARVHNMS 183 (200)
Q Consensus 174 ~D~s~v~~~~ 183 (200)
..++.+..+.
T Consensus 116 s~D~~v~lWd 125 (304)
T 2ynn_A 116 SDDLTVKLWN 125 (304)
T ss_dssp ETTSCEEEEE
T ss_pred CCCCeEEEEE
Confidence 5566666654
No 152
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.10 E-value=0.31 Score=40.45 Aligned_cols=78 Identities=18% Similarity=0.127 Sum_probs=43.4
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|+|||+.||-.. ++.|.+.+++.+..... .......+.|.. +....+.|||||++|+-.
T Consensus 58 ~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~--~~~~~~~~~~h~---------~~V~~v~~sp~g~~las~- 125 (330)
T 2hes_X 58 KKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTF--EMDLLAIIEGHE---------NEVKGVAWSNDGYYLATC- 125 (330)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEEC-------C--CCEEEEEEC-------------CEEEEEECTTSCEEEEE-
T ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccc--cceeEEEEcCCC---------CcEEEEEECCCCCEEEEE-
Confidence 45689999999999988775 56788887753211000 000000011110 123578999999988644
Q ss_pred EcCCcceEEEE
Q psy7767 174 FNDARVHNMSY 184 (200)
Q Consensus 174 ~D~s~v~~~~i 184 (200)
..++.+..+.+
T Consensus 126 s~D~~v~iwd~ 136 (330)
T 2hes_X 126 SRDKSVWIWET 136 (330)
T ss_dssp ETTSCEEEEEC
T ss_pred eCCCEEEEEec
Confidence 44555666654
No 153
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.10 E-value=0.28 Score=39.68 Aligned_cols=45 Identities=16% Similarity=0.229 Sum_probs=31.5
Q ss_pred ceeecCC-CCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEee
Q psy7767 88 DVSDLDG-SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTR 133 (200)
Q Consensus 88 ~v~~lt~-~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~ 133 (200)
+++.+.. ......++|+|||+.|.++. ++.|+..+.+++ ...+..
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~ 66 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMH 66 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEES
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEEC
Confidence 3444443 23457899999999888875 568999998877 555543
No 154
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=93.99 E-value=0.32 Score=41.84 Aligned_cols=71 Identities=14% Similarity=0.143 Sum_probs=48.8
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..+.|+|+|+.|+-.. ++.|.+.++++++..+...... +....+.|+|||+.|+ ..
T Consensus 108 ~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~------------------~~V~~v~~~~~~~~l~-sg 168 (410)
T 1vyh_C 108 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT------------------DSVQDISFDHSGKLLA-SC 168 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCS------------------SCEEEEEECTTSSEEE-EE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccC------------------CcEEEEEEcCCCCEEE-EE
Confidence 45688999999999887775 5689999998776543322111 1234688999999775 44
Q ss_pred EcCCcceEEEE
Q psy7767 174 FNDARVHNMSY 184 (200)
Q Consensus 174 ~D~s~v~~~~i 184 (200)
..++.+..+.+
T Consensus 169 s~D~~i~iwd~ 179 (410)
T 1vyh_C 169 SADMTIKLWDF 179 (410)
T ss_dssp ETTSCCCEEET
T ss_pred eCCCeEEEEeC
Confidence 55566666643
No 155
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=93.88 E-value=0.11 Score=44.46 Aligned_cols=59 Identities=8% Similarity=0.091 Sum_probs=39.4
Q ss_pred eecCCCCCceeeEECcCCCEEEEEEcCcEEEEECCCC--CeE-EEeeCCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767 90 SDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFR--SIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG 166 (200)
Q Consensus 90 ~~lt~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g--~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG 166 (200)
..+..+. ...+++||||+.|+-..++.|.+.+++++ +.. ++...|. ....+.++|||
T Consensus 300 ~~i~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~i~~~G~-------------------~P~~~~~~p~G 359 (361)
T 2oiz_A 300 ARIPGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRTIEGAAE-------------------ASLQVQFHPVG 359 (361)
T ss_dssp EEEECTT-CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEEETTSCS-------------------SEEEEEECCCS
T ss_pred EEEecCC-eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEEeccCCC-------------------CcEEEEecCCC
Confidence 3444455 88999999999654333468999999888 443 2222232 34567899999
Q ss_pred CE
Q psy7767 167 SI 168 (200)
Q Consensus 167 k~ 168 (200)
+.
T Consensus 360 ~~ 361 (361)
T 2oiz_A 360 GT 361 (361)
T ss_dssp CC
T ss_pred CC
Confidence 73
No 156
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=93.74 E-value=0.2 Score=43.24 Aligned_cols=73 Identities=10% Similarity=0.070 Sum_probs=49.4
Q ss_pred CCCceeeEECcCCCEEEEEE--cCcEEEEECCCCC-e-EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRS-I-NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~-~-~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
...+..++|+|+|+.+..+. ++.|.+.++.... . ..+.... +....+.|||||+.++
T Consensus 277 ~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~-------------------~~v~~i~~sp~~~~~l 337 (430)
T 2xyi_A 277 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-------------------DEIFQVQWSPHNETIL 337 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS-------------------SCEEEEEECSSCTTEE
T ss_pred CCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC-------------------CCEEEEEECCCCCCEE
Confidence 56688999999998655443 5679999987632 2 2222111 1335789999998876
Q ss_pred EEEEcCCcceEEEEEe
Q psy7767 171 YMKFNDARVHNMSYIH 186 (200)
Q Consensus 171 f~r~D~s~v~~~~i~~ 186 (200)
.....++.+.++.+..
T Consensus 338 ~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 338 ASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEEETTSCCEEEEGGG
T ss_pred EEEeCCCcEEEEeCCC
Confidence 6767777777776654
No 157
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=93.72 E-value=0.19 Score=44.36 Aligned_cols=71 Identities=10% Similarity=-0.044 Sum_probs=43.1
Q ss_pred eeecCCCCCceeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeEEEeeCC-CcceEecccccceeeeeeeCC
Q psy7767 89 VSDLDGSNFLQLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSINALTRDG-IKGVLFNGVADWVYEEEVFSS 156 (200)
Q Consensus 89 v~~lt~~~~is~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~rLT~dg-~~~~~~nG~pdwv~eEEi~~~ 156 (200)
+.++..+..- .+.+||||+++.... ++.|.+.|+.+++..+-..-| ... +.-| ..
T Consensus 59 ~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~-~~~g-----------~~ 125 (368)
T 1mda_H 59 LGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR-FSVG-----------PR 125 (368)
T ss_dssp EEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS-CCBS-----------CC
T ss_pred EEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc-cccC-----------CC
Confidence 3344434444 899999999975553 356999998887764332212 100 0000 13
Q ss_pred CcceEEccCCCEEEEE
Q psy7767 157 TKTLWFSPDGSILAYM 172 (200)
Q Consensus 157 ~~~~~WSPDGk~Laf~ 172 (200)
...+.+||||++|+..
T Consensus 126 P~~ia~SpDGk~lyVa 141 (368)
T 1mda_H 126 VHIIGNCASSACLLFF 141 (368)
T ss_dssp TTSEEECTTSSCEEEE
T ss_pred cceEEEcCCCCEEEEE
Confidence 5678999999987544
No 158
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.60 E-value=0.18 Score=42.29 Aligned_cols=55 Identities=20% Similarity=0.216 Sum_probs=35.1
Q ss_pred CceeeEECcCCCEEEEEEc--------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767 97 FLQLVQWSPVGHDLIFVKD--------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI 168 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~--------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~ 168 (200)
.+.++.++|||+. .+... +.||..+ +++..++.... ....++.|||||+.
T Consensus 135 ~~~~i~~d~~G~l-~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~-------------------~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 135 RSNDGRMHPSGAL-WIGTMGRKAETGAGSIYHVA--KGKVTKLFADI-------------------SIPNSICFSPDGTT 192 (326)
T ss_dssp EEEEEEECTTSCE-EEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE-------------------SSEEEEEECTTSCE
T ss_pred CCCCEEECCCCCE-EEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC-------------------cccCCeEEcCCCCE
Confidence 3578899999984 33332 4688877 35554443211 13457899999998
Q ss_pred EEEEE
Q psy7767 169 LAYMK 173 (200)
Q Consensus 169 Laf~r 173 (200)
|++..
T Consensus 193 lyv~~ 197 (326)
T 2ghs_A 193 GYFVD 197 (326)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87653
No 159
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=93.58 E-value=0.66 Score=43.09 Aligned_cols=72 Identities=11% Similarity=0.019 Sum_probs=44.7
Q ss_pred eeecCCCCCceeeEECcCCCEEEEEE-cCcEEEEECC--CCCeE-EEeeCCCcceEecccccceeeeeeeCCCcceEEc-
Q psy7767 89 VSDLDGSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDD--FRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS- 163 (200)
Q Consensus 89 v~~lt~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~--~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS- 163 (200)
+.++..+.....+.+||||+++.... ++.|.+.++. +++.. +|.. |. ...++.+|
T Consensus 190 ~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~-------------------~P~~ia~s~ 249 (567)
T 1qks_A 190 KTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GS-------------------EARSIETSK 249 (567)
T ss_dssp EEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CS-------------------EEEEEEECC
T ss_pred EEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CC-------------------CCceeEEcc
Confidence 33454555667899999999864433 3469999885 44433 2222 21 23467899
Q ss_pred ---cCCCEEEEEEEcCCcce
Q psy7767 164 ---PDGSILAYMKFNDARVH 180 (200)
Q Consensus 164 ---PDGk~Laf~r~D~s~v~ 180 (200)
|||++|+........+.
T Consensus 250 ~~~pDGk~l~v~n~~~~~v~ 269 (567)
T 1qks_A 250 MEGWEDKYAIAGAYWPPQYV 269 (567)
T ss_dssp STTCTTTEEEEEEEETTEEE
T ss_pred ccCCCCCEEEEEEccCCeEE
Confidence 79998866555444443
No 160
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.58 E-value=0.35 Score=44.48 Aligned_cols=69 Identities=16% Similarity=0.005 Sum_probs=47.8
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.|+-.. ++.|.+.++.++...+...... +....+.|||||+.|+-.
T Consensus 430 ~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~------------------~~v~~~~~s~~~~~l~s~- 490 (694)
T 3dm0_A 430 SHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHT------------------KDVLSVAFSLDNRQIVSA- 490 (694)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS------------------SCEEEEEECTTSSCEEEE-
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCC------------------CCEEEEEEeCCCCEEEEE-
Confidence 46688999999999988775 5789999998776543332111 123468899999988644
Q ss_pred EcCCcceEE
Q psy7767 174 FNDARVHNM 182 (200)
Q Consensus 174 ~D~s~v~~~ 182 (200)
..++.+..+
T Consensus 491 s~D~~i~iw 499 (694)
T 3dm0_A 491 SRDRTIKLW 499 (694)
T ss_dssp ETTSCEEEE
T ss_pred eCCCEEEEE
Confidence 444555554
No 161
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.41 E-value=0.7 Score=37.20 Aligned_cols=70 Identities=10% Similarity=-0.108 Sum_probs=47.7
Q ss_pred CceeeE----ECcCCCEEEEEEc-CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc---CCCE
Q psy7767 97 FLQLVQ----WSPVGHDLIFVKD-NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP---DGSI 168 (200)
Q Consensus 97 ~is~~~----wSPDGk~IAFV~~-gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP---DGk~ 168 (200)
.+..+. |+|+|+.++.... +.|.+.++.++.......... ....+.|+| ||+.
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------------~v~~~~~~~~~~~~~~ 226 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKN-------------------GVCSLEFDRKDISMNK 226 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSS-------------------CEEEEEESCSSSSCCE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCC-------------------ceEEEEcCCCCCCCCE
Confidence 455555 8999999998875 789999998777654433221 335789999 9988
Q ss_pred EEEEEEcCCcceEEEEEe
Q psy7767 169 LAYMKFNDARVHNMSYIH 186 (200)
Q Consensus 169 Laf~r~D~s~v~~~~i~~ 186 (200)
|+.. ..++.+..+.+..
T Consensus 227 l~~~-~~dg~i~i~d~~~ 243 (357)
T 3i2n_A 227 LVAT-SLEGKFHVFDMRT 243 (357)
T ss_dssp EEEE-ESTTEEEEEEEEE
T ss_pred EEEE-CCCCeEEEEeCcC
Confidence 7654 5556676666543
No 162
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=93.28 E-value=0.41 Score=38.97 Aligned_cols=75 Identities=20% Similarity=0.178 Sum_probs=46.3
Q ss_pred CCCceeeEECcCC---CEEEEEE-cCcEEEEECCCCC---eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767 95 SNFLQLVQWSPVG---HDLIFVK-DNNLYQAYDDFRS---INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS 167 (200)
Q Consensus 95 ~~~is~~~wSPDG---k~IAFV~-~gdLyv~~~~~g~---~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk 167 (200)
...+..++|||+| +.||-.. ++.|.+.+++.+. ...+.... +.+ +....+.|||||+
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~-------~~~---------~~v~~~~~s~~g~ 267 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEE-------KFP---------DVLWRASWSLSGN 267 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSS-------CCS---------SCEEEEEECSSSC
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecc-------cCC---------CcEEEEEECCCCC
Confidence 4567999999996 6666654 5678887776532 11222100 001 1234679999999
Q ss_pred EEEEEEEcCCcceEEEEEe
Q psy7767 168 ILAYMKFNDARVHNMSYIH 186 (200)
Q Consensus 168 ~Laf~r~D~s~v~~~~i~~ 186 (200)
.||-. ..++.+..+....
T Consensus 268 ~las~-~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 268 VLALS-GGDNKVTLWKENL 285 (297)
T ss_dssp CEEEE-ETTSCEEEEEECT
T ss_pred EEEEE-cCCCcEEEEEECC
Confidence 98754 5556677776543
No 163
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.23 E-value=0.4 Score=39.84 Aligned_cols=71 Identities=8% Similarity=0.120 Sum_probs=46.5
Q ss_pred CCCceeeEECcCC-CEEEEEE-cCcEEEEECCCCCeEEEeeC-CCcceEecccccceeeeeeeCCCcceEEcc-CCCEEE
Q psy7767 95 SNFLQLVQWSPVG-HDLIFVK-DNNLYQAYDDFRSINALTRD-GIKGVLFNGVADWVYEEEVFSSTKTLWFSP-DGSILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDG-k~IAFV~-~gdLyv~~~~~g~~~rLT~d-g~~~~~~nG~pdwv~eEEi~~~~~~~~WSP-DGk~La 170 (200)
...+..++|+||| +.|+... ++.|.+.++.++........ +.. +....+.||| ||+.|+
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~-----------------~~v~~~~~~~~~~~~l~ 135 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPG-----------------DAITGMKFNQFNTNQLF 135 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTT-----------------CBEEEEEEETTEEEEEE
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcC-----------------CceeEEEeCCCCCCEEE
Confidence 4678999999999 7777765 57899999987766544431 210 1234688999 555554
Q ss_pred EEEEcCCcceEEE
Q psy7767 171 YMKFNDARVHNMS 183 (200)
Q Consensus 171 f~r~D~s~v~~~~ 183 (200)
....++.+..+.
T Consensus 136 -s~~~d~~i~iwd 147 (383)
T 3ei3_B 136 -VSSIRGATTLRD 147 (383)
T ss_dssp -EEETTTEEEEEE
T ss_pred -EEeCCCEEEEEE
Confidence 445555555543
No 164
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=93.16 E-value=0.42 Score=38.59 Aligned_cols=64 Identities=23% Similarity=0.311 Sum_probs=37.2
Q ss_pred ceeeEECcCCCEEEEEE-------------------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCc
Q psy7767 98 LQLVQWSPVGHDLIFVK-------------------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTK 158 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~-------------------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~ 158 (200)
..+++++|||+.. ++- .+.||..+.+ +....+.... ....
T Consensus 117 ~~~i~~d~~G~l~-vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------------~~~~ 175 (296)
T 3e5z_A 117 PNDVCLAPDGSLW-FSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR-------------------VKPN 175 (296)
T ss_dssp CCCEEECTTSCEE-EEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-------------------SSEE
T ss_pred CCCEEECCCCCEE-EECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-------------------CCCc
Confidence 4568889998733 321 2467777655 4444443211 2345
Q ss_pred ceEEccCCCEEEEEEEcCCcceEEE
Q psy7767 159 TLWFSPDGSILAYMKFNDARVHNMS 183 (200)
Q Consensus 159 ~~~WSPDGk~Laf~r~D~s~v~~~~ 183 (200)
++.|||||+.| +.......+..+.
T Consensus 176 gi~~s~dg~~l-v~~~~~~~i~~~~ 199 (296)
T 3e5z_A 176 GLAFLPSGNLL-VSDTGDNATHRYC 199 (296)
T ss_dssp EEEECTTSCEE-EEETTTTEEEEEE
T ss_pred cEEECCCCCEE-EEeCCCCeEEEEE
Confidence 78999999988 6544334444443
No 165
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.14 E-value=0.25 Score=40.56 Aligned_cols=34 Identities=12% Similarity=0.008 Sum_probs=28.2
Q ss_pred CCCceeeEECc-CCCEEEEEE-cCcEEEEECCCCCe
Q psy7767 95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDFRSI 128 (200)
Q Consensus 95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~g~~ 128 (200)
...+..++|+| ||+.|+... ++.|.+.+++++..
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~ 78 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSR 78 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSS
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcc
Confidence 56789999999 999998886 67899999887653
No 166
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=93.14 E-value=0.38 Score=41.12 Aligned_cols=51 Identities=14% Similarity=0.041 Sum_probs=31.5
Q ss_pred cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEE
Q psy7767 115 DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 115 ~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~ 185 (200)
++.|.+.++..+.......... ....++.|||||++||... + .++-.+.+.
T Consensus 338 Dg~V~lwd~~~~~~~~~~~~~~------------------~~V~svafspdG~~LA~as-~-~Gv~lvrL~ 388 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSIPIQLG------------------MPIVDFCWHQDGSHLAIAT-E-GSVLLTRLM 388 (393)
T ss_dssp TTEEEEEETTCTTCCEEEEECS------------------SCEEEEEECTTSSEEEEEE-S-SEEEEEEEG
T ss_pred CCEEEEEECCCCcEEEEecCCC------------------CcEEEEEEcCCCCEEEEEe-C-CCeEEEEEe
Confidence 4678888887765543322111 1235789999999998763 3 345555543
No 167
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.08 E-value=0.42 Score=40.00 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=26.0
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCe
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSI 128 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~ 128 (200)
+.....++++|||+.| |+.++.|++.+.++++.
T Consensus 224 g~~p~~la~~~d~~~l-yv~~~~v~~~d~~t~~~ 256 (328)
T 3dsm_A 224 GDWPSEVQLNGTRDTL-YWINNDIWRMPVEADRV 256 (328)
T ss_dssp TCCCEEEEECTTSCEE-EEESSSEEEEETTCSSC
T ss_pred CCCceeEEEecCCCEE-EEEccEEEEEECCCCce
Confidence 4467889999999986 55566999999887664
No 168
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.05 E-value=0.29 Score=40.22 Aligned_cols=56 Identities=18% Similarity=0.236 Sum_probs=35.7
Q ss_pred ceeeEECcCCCEEEEEE-------------------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCc
Q psy7767 98 LQLVQWSPVGHDLIFVK-------------------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTK 158 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~-------------------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~ 158 (200)
..+++++|||+ |.|+- .+.||..+.++++..+++ + +....
T Consensus 133 ~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~------------------~~~p~ 191 (305)
T 3dr2_A 133 PNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D------------------LDHPN 191 (305)
T ss_dssp CCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E------------------ESSEE
T ss_pred CCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--c------------------CCCCc
Confidence 45688889887 33320 245777776666665554 1 12445
Q ss_pred ceEEccCCCEEEEEEE
Q psy7767 159 TLWFSPDGSILAYMKF 174 (200)
Q Consensus 159 ~~~WSPDGk~Laf~r~ 174 (200)
++.|||||+.|++.-.
T Consensus 192 gl~~spdg~~lyv~~~ 207 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQT 207 (305)
T ss_dssp EEEECTTSSEEEEEEC
T ss_pred ceEEcCCCCEEEEEec
Confidence 7899999998865533
No 169
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=92.93 E-value=0.37 Score=39.50 Aligned_cols=65 Identities=17% Similarity=0.235 Sum_probs=37.2
Q ss_pred ceeeEECcCCCEEEEEE-c------------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767 98 LQLVQWSPVGHDLIFVK-D------------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP 164 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~-~------------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP 164 (200)
..+++++|||+ +.+.. + +.||..+.+ +....+... +....++.|||
T Consensus 100 ~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~-------------------~~~pngi~~sp 158 (297)
T 3g4e_A 100 FNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQ-------------------VDISNGLDWSL 158 (297)
T ss_dssp EEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEE-------------------ESBEEEEEECT
T ss_pred CCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC-CCEEEEeec-------------------cccccceEEcC
Confidence 56788999998 44432 1 246666543 333333221 12456789999
Q ss_pred CCCEEEEEEEcCCcceEEE
Q psy7767 165 DGSILAYMKFNDARVHNMS 183 (200)
Q Consensus 165 DGk~Laf~r~D~s~v~~~~ 183 (200)
||+.|++.-.....+..+.
T Consensus 159 dg~~lyv~~~~~~~i~~~~ 177 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFD 177 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEE
T ss_pred CCCEEEEecCCCCcEEEEe
Confidence 9998866544444444443
No 170
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=92.88 E-value=0.4 Score=40.18 Aligned_cols=59 Identities=7% Similarity=-0.015 Sum_probs=38.3
Q ss_pred CCCCceeeEECcCCCEEEEEEc------------CcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCcce
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVKD------------NNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTL 160 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~~------------gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~ 160 (200)
.+.....+.++|||+ +.++.. +.|++.+.++++.. .+.-... ....++
T Consensus 170 ~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g------------------~~p~~l 230 (328)
T 3dsm_A 170 IGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG------------------DWPSEV 230 (328)
T ss_dssp CSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT------------------CCCEEE
T ss_pred cCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC------------------CCceeE
Confidence 344557788999997 555543 35999988777654 2322110 135678
Q ss_pred EEccCCCEEEE
Q psy7767 161 WFSPDGSILAY 171 (200)
Q Consensus 161 ~WSPDGk~Laf 171 (200)
.+||||++|.+
T Consensus 231 a~~~d~~~lyv 241 (328)
T 3dsm_A 231 QLNGTRDTLYW 241 (328)
T ss_dssp EECTTSCEEEE
T ss_pred EEecCCCEEEE
Confidence 99999998754
No 171
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.83 E-value=0.19 Score=43.36 Aligned_cols=70 Identities=10% Similarity=-0.017 Sum_probs=47.9
Q ss_pred CceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767 97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN 175 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D 175 (200)
.+..+.|+|||+.|+... ++.|.+.++++.....+.... +....+.|+|+|+.++.....
T Consensus 211 ~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~-------------------~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 211 WFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHK-------------------KKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp CCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCS-------------------SCEEEEEECTTCSSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEeccc-------------------ceEEeeeecCCCceEEEEecC
Confidence 356789999999988764 568999988654332222110 123468999999987777777
Q ss_pred CCcceEEEEE
Q psy7767 176 DARVHNMSYI 185 (200)
Q Consensus 176 ~s~v~~~~i~ 185 (200)
++.+.++.+.
T Consensus 272 d~~v~iwd~~ 281 (435)
T 4e54_B 272 DQTVKIWDLR 281 (435)
T ss_dssp TSBCCEEETT
T ss_pred cceeeEEecc
Confidence 7777777543
No 172
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=92.82 E-value=0.47 Score=42.50 Aligned_cols=70 Identities=11% Similarity=0.051 Sum_probs=40.9
Q ss_pred eecCCCCCceeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCC
Q psy7767 90 SDLDGSNFLQLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSST 157 (200)
Q Consensus 90 ~~lt~~~~is~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~ 157 (200)
..+..+.... +++||||+++.... .+.|.+.|..+++.. .|.-.+.+.. .-| ...
T Consensus 73 ~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~-~~g-----------~~P 139 (386)
T 3sjl_D 73 GMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRF-LVG-----------TYP 139 (386)
T ss_dssp EEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC-CBS-----------CCG
T ss_pred EEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccc-ccC-----------CCC
Confidence 3343343444 99999999975443 235888888877654 3322110000 000 145
Q ss_pred cceEEccCCCEEEEE
Q psy7767 158 KTLWFSPDGSILAYM 172 (200)
Q Consensus 158 ~~~~WSPDGk~Laf~ 172 (200)
..+.+||||++|...
T Consensus 140 ~~~a~spDGk~lyVa 154 (386)
T 3sjl_D 140 WMTSLTPDGKTLLFY 154 (386)
T ss_dssp GGEEECTTSSEEEEE
T ss_pred ceEEEcCCCCEEEEE
Confidence 678999999987544
No 173
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=92.71 E-value=0.53 Score=37.13 Aligned_cols=68 Identities=12% Similarity=0.024 Sum_probs=43.3
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
...+..+.|+|+|+.++-..++.|.+.++..++..+...... +....+.|+|||+ |+ ...
T Consensus 184 ~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~------------------~~i~~~~~~~~~~-l~-~~~ 243 (313)
T 3odt_A 184 NDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHE------------------SFVYCIKLLPNGD-IV-SCG 243 (313)
T ss_dssp SSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCS------------------SCEEEEEECTTSC-EE-EEE
T ss_pred cccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCC------------------ceEEEEEEecCCC-EE-EEe
Confidence 466799999999993333346789999998776554333111 1234688999994 54 334
Q ss_pred cCCcceEE
Q psy7767 175 NDARVHNM 182 (200)
Q Consensus 175 D~s~v~~~ 182 (200)
.++.+..+
T Consensus 244 ~dg~v~iw 251 (313)
T 3odt_A 244 EDRTVRIW 251 (313)
T ss_dssp TTSEEEEE
T ss_pred cCCEEEEE
Confidence 44444444
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=92.60 E-value=0.48 Score=38.61 Aligned_cols=37 Identities=14% Similarity=0.285 Sum_probs=27.5
Q ss_pred CCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEee
Q psy7767 96 NFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTR 133 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~ 133 (200)
.....++|+|||+ |.++. ++.|++.+.++++..++..
T Consensus 45 ~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 45 LQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred ccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcEEEEee
Confidence 3457899999998 54443 4679999988888776653
No 175
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.44 E-value=0.68 Score=38.05 Aligned_cols=71 Identities=20% Similarity=0.181 Sum_probs=45.2
Q ss_pred CCCceeeEECcCC----CEEEEEE-cCcEEEEECCCCCe-----EEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767 95 SNFLQLVQWSPVG----HDLIFVK-DNNLYQAYDDFRSI-----NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP 164 (200)
Q Consensus 95 ~~~is~~~wSPDG----k~IAFV~-~gdLyv~~~~~g~~-----~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP 164 (200)
...+..++|+|+| +.||-.. ++.|.+.++++... ..+.. .. +....+.|||
T Consensus 212 ~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~----------~~---------~~v~~v~~sp 272 (316)
T 3bg1_A 212 SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHK----------FN---------DVVWHVSWSI 272 (316)
T ss_dssp SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEE----------CS---------SCEEEEEECT
T ss_pred CCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhc----------CC---------CcEEEEEEcC
Confidence 3557899999997 6676654 56788888765211 11111 00 1234689999
Q ss_pred CCCEEEEEEEcCCcceEEEEE
Q psy7767 165 DGSILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 165 DGk~Laf~r~D~s~v~~~~i~ 185 (200)
||+.||.. ..++.+..+...
T Consensus 273 ~g~~las~-~~D~~v~lw~~~ 292 (316)
T 3bg1_A 273 TANILAVS-GGDNKVTLWKES 292 (316)
T ss_dssp TTCCEEEE-ESSSCEEEEEEC
T ss_pred CCCEEEEE-cCCCeEEEEEEC
Confidence 99988755 455667777654
No 176
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.39 E-value=1.9 Score=35.22 Aligned_cols=73 Identities=12% Similarity=-0.014 Sum_probs=48.4
Q ss_pred CCCCceeeEECcCC---CEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767 94 GSNFLQLVQWSPVG---HDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL 169 (200)
Q Consensus 94 ~~~~is~~~wSPDG---k~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L 169 (200)
....+....++|++ +.++... ++.|.+.++..+.......... +....+.|+|||++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l 201 (408)
T 4a11_B 140 FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR------------------QEILAVSWSPRYDYI 201 (408)
T ss_dssp CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC------------------SCEEEEEECSSCTTE
T ss_pred CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC------------------CcEEEEEECCCCCcE
Confidence 34567888888854 4666664 5689999988765433222111 123578999999987
Q ss_pred EEEEEcCCcceEEEE
Q psy7767 170 AYMKFNDARVHNMSY 184 (200)
Q Consensus 170 af~r~D~s~v~~~~i 184 (200)
++....++.+..+.+
T Consensus 202 l~~~~~dg~i~i~d~ 216 (408)
T 4a11_B 202 LATASADSRVKLWDV 216 (408)
T ss_dssp EEEEETTSCEEEEET
T ss_pred EEEEcCCCcEEEEEC
Confidence 667777777777665
No 177
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.39 E-value=2 Score=36.78 Aligned_cols=72 Identities=7% Similarity=-0.046 Sum_probs=45.1
Q ss_pred CCCceeeEECc-CCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+..++|+| ||+.|+-.. ++.|-+.++.++....+....... .....+.|+|||+.|+..
T Consensus 164 ~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~g 227 (435)
T 4e54_B 164 GGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTIN----------------IWFCSLDVSASSRMVVTG 227 (435)
T ss_dssp SCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCS----------------CCCCCEEEETTTTEEEEE
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCC----------------ccEEEEEECCCCCEEEEE
Confidence 46789999999 577765443 567888898765544443322100 124568899999987643
Q ss_pred EEcCCcceEEE
Q psy7767 173 KFNDARVHNMS 183 (200)
Q Consensus 173 r~D~s~v~~~~ 183 (200)
..++.+..+.
T Consensus 228 -~~dg~i~~wd 237 (435)
T 4e54_B 228 -DNVGNVILLN 237 (435)
T ss_dssp -CSSSBEEEEE
T ss_pred -eCCCcEeeec
Confidence 4444454443
No 178
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.05 E-value=1.3 Score=37.97 Aligned_cols=70 Identities=14% Similarity=0.078 Sum_probs=46.7
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|+|+|+.|+-.. ++.|.+.++.++...+...... . ....+.|+|||+.|+- .
T Consensus 192 ~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~---------~---------~v~~~~~~~~g~~l~s-~ 252 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR---------E---------WVRMVRPNQDGTLIAS-C 252 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS---------S---------CEEEEEECTTSSEEEE-E
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC---------c---------cEEEEEECCCCCEEEE-E
Confidence 45689999999999987765 5679999998776543222111 1 2245789999987754 4
Q ss_pred EcCCcceEEE
Q psy7767 174 FNDARVHNMS 183 (200)
Q Consensus 174 ~D~s~v~~~~ 183 (200)
..++.+..+.
T Consensus 253 s~D~~v~vwd 262 (410)
T 1vyh_C 253 SNDQTVRVWV 262 (410)
T ss_dssp ETTSCEEEEE
T ss_pred cCCCeEEEEE
Confidence 4455555553
No 179
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=91.89 E-value=4.4 Score=32.93 Aligned_cols=38 Identities=11% Similarity=-0.039 Sum_probs=28.9
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEee
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTR 133 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~ 133 (200)
...+..++++|||+. ....++.|++.+.++++...+..
T Consensus 53 ~~~~~~i~~~~dG~l-~v~~~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 53 DAPVSSVALRQSGGY-VATIGTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp SSCEEEEEEBTTSSE-EEEETTEEEEEETTTTEEEEEEE
T ss_pred CCceEEEEECCCCCE-EEEECCeEEEEECCCCcEEEEEe
Confidence 456788899999994 44457789999988887766654
No 180
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=91.78 E-value=0.72 Score=37.16 Aligned_cols=70 Identities=11% Similarity=-0.015 Sum_probs=45.5
Q ss_pred CCCceeeEECcC----CCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc-CCCE
Q psy7767 95 SNFLQLVQWSPV----GHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP-DGSI 168 (200)
Q Consensus 95 ~~~is~~~wSPD----Gk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP-DGk~ 168 (200)
...+..++|+|+ |+.|+... ++.|.+.++.+++..+...... +....+.|+| ||+.
T Consensus 69 ~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~------------------~~i~~~~~~~~~~~~ 130 (366)
T 3k26_A 69 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHG------------------NAINELKFHPRDPNL 130 (366)
T ss_dssp TCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCC------------------SCEEEEEECSSCTTE
T ss_pred CCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCC------------------CcEEEEEECCCCCCE
Confidence 356899999999 55666654 5679999988776654333111 1345789999 8887
Q ss_pred EEEEEEcCCcceEEE
Q psy7767 169 LAYMKFNDARVHNMS 183 (200)
Q Consensus 169 Laf~r~D~s~v~~~~ 183 (200)
|+. ...++.+..+.
T Consensus 131 l~s-~~~dg~i~iwd 144 (366)
T 3k26_A 131 LLS-VSKDHALRLWN 144 (366)
T ss_dssp EEE-EETTSCEEEEE
T ss_pred EEE-EeCCCeEEEEE
Confidence 754 44455555543
No 181
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=91.65 E-value=0.31 Score=40.77 Aligned_cols=35 Identities=6% Similarity=-0.033 Sum_probs=27.8
Q ss_pred ceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEe
Q psy7767 98 LQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALT 132 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT 132 (200)
...|.|+||++.+.|+- ++.|+..+.+++....++
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~ 87 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA 87 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 46899999999998885 568999998877665554
No 182
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=91.53 E-value=0.43 Score=42.15 Aligned_cols=63 Identities=10% Similarity=0.081 Sum_probs=40.3
Q ss_pred eEECcCCCEEEEEEc----------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 101 VQWSPVGHDLIFVKD----------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 101 ~~wSPDGk~IAFV~~----------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
..++|||+++..... +.+.+.|+.+.+..+-...|. ...++.|+|||++|+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-------------------~p~gi~~s~Dg~~l~ 329 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-------------------DSDAIIAAQDGASDN 329 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-------------------EECEEEECCSSSCEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-------------------CcceEEECCCCCEEE
Confidence 679999999755432 256688887765532222111 345789999999988
Q ss_pred EEEE-cCCcceEE
Q psy7767 171 YMKF-NDARVHNM 182 (200)
Q Consensus 171 f~r~-D~s~v~~~ 182 (200)
+... ..+.+..+
T Consensus 330 va~~~~~~~VsVI 342 (368)
T 1mda_H 330 YANSAGTEVLDIY 342 (368)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEccCCCCeEEEE
Confidence 7765 34444433
No 183
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=91.47 E-value=0.73 Score=38.73 Aligned_cols=33 Identities=12% Similarity=-0.088 Sum_probs=25.3
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCCCC
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRS 127 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~ 127 (200)
...+..++|||||+.||-..++.+.+.+++.+.
T Consensus 19 ~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~ 51 (355)
T 3vu4_A 19 SNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVA 51 (355)
T ss_dssp CCCCCEEEECTTSSEEEEECSSEEEEEEETTEE
T ss_pred CCceEEEEECCCCCEEEEEcCCEEEEEecCCcc
Confidence 467899999999999987766666666666443
No 184
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=91.39 E-value=2.1 Score=39.00 Aligned_cols=77 Identities=6% Similarity=-0.097 Sum_probs=46.4
Q ss_pred eecCCCCCceeeEECc----CCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767 90 SDLDGSNFLQLVQWSP----VGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS 163 (200)
Q Consensus 90 ~~lt~~~~is~~~wSP----DGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS 163 (200)
..+..+.....+++|| ||++++... .+.|.+.+..+++..+........ ..+ ..+. .+ .+..++.+|
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~--~~~-~~~~--~~--~~v~~i~~s 288 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT--VDT-QTYH--PE--PRVAAIIAS 288 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC--SSS-CCEE--SC--CCEEEEEEC
T ss_pred EEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcc--cCc-cccc--cC--CceEEEEEC
Confidence 3444566678999999 999986664 578989998887765444322100 000 0000 00 134578899
Q ss_pred cCCCEEEEEE
Q psy7767 164 PDGSILAYMK 173 (200)
Q Consensus 164 PDGk~Laf~r 173 (200)
|||+.+++.-
T Consensus 289 ~~~~~~~vs~ 298 (543)
T 1nir_A 289 HEHPEFIVNV 298 (543)
T ss_dssp SSSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 9998775543
No 185
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.31 E-value=0.86 Score=36.48 Aligned_cols=57 Identities=21% Similarity=0.085 Sum_probs=39.2
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La 170 (200)
...+..++|+|||+.|+-.. ++.|.+.++..+........+. ....+.|+|++..|+
T Consensus 215 ~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-------------------~v~~~~~~~~~~~~~ 272 (340)
T 4aow_A 215 TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-------------------IINALCFSPNRYWLC 272 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS-------------------CEEEEEECSSSSEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc-------------------eEEeeecCCCCceee
Confidence 45678899999999987764 5789999988665543333221 234578999886554
No 186
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=91.24 E-value=3.4 Score=36.51 Aligned_cols=69 Identities=12% Similarity=0.067 Sum_probs=39.6
Q ss_pred CceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
....++++|++..|.++. ++.|++.+.+++...++...+. .....++.|+|||++|.++-.
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-----------------~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-----------------SGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-----------------SSCCEEEEECTTSSEEEEEET
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-----------------CCcceeEEEcCCCCEEEEEEC
Confidence 446677888555554443 3567777776555433333221 013567899999997765533
Q ss_pred cCCcceEE
Q psy7767 175 NDARVHNM 182 (200)
Q Consensus 175 D~s~v~~~ 182 (200)
....+..+
T Consensus 290 ~~~~I~~~ 297 (430)
T 3tc9_A 290 NQHYILRS 297 (430)
T ss_dssp TTTEEEEE
T ss_pred CCCEEEEE
Confidence 33334333
No 187
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=91.17 E-value=0.78 Score=37.25 Aligned_cols=70 Identities=16% Similarity=0.109 Sum_probs=43.7
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCe---EEEeeCCCcceEecccccceeeeeeeCCCcceEEccC--CCE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSI---NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD--GSI 168 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~---~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD--Gk~ 168 (200)
...+..++|||||+.||-.. ++.|.+.+++++.. ..+. | .. +....+.|+|+ |+.
T Consensus 9 ~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~--g--------H~---------~~V~~v~~s~~~~g~~ 69 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT--G--------HE---------GPVWRVDWAHPKFGTI 69 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC--C--------CS---------SCEEEEEECCGGGCSE
T ss_pred cCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc--c--------cc---------CCeEEEEecCCCcCCE
Confidence 45678999999999988775 56788888764322 1221 1 10 12346789874 776
Q ss_pred EEEEEEcCCcceEEEE
Q psy7767 169 LAYMKFNDARVHNMSY 184 (200)
Q Consensus 169 Laf~r~D~s~v~~~~i 184 (200)
|+ ....++.+.++.+
T Consensus 70 l~-s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 70 LA-SCSYDGKVMIWKE 84 (297)
T ss_dssp EE-EEETTTEEEEEEB
T ss_pred EE-EEcCCCEEEEEEc
Confidence 65 4455555665544
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=91.16 E-value=1 Score=37.40 Aligned_cols=55 Identities=15% Similarity=0.164 Sum_probs=35.7
Q ss_pred CCceeeEECcCCCEEEEEEcC-------------------------cEEEEECCCCCeEEEeeCCCcceEecccccceee
Q psy7767 96 NFLQLVQWSPVGHDLIFVKDN-------------------------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYE 150 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~~g-------------------------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~e 150 (200)
+.+..++++|||+.++--.++ .|++.+.++|+..+....+.
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-------------- 89 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNL-------------- 89 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTT--------------
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCc--------------
Confidence 457888999999876544444 48888777666543322111
Q ss_pred eeeeCCCcceEEccCCC
Q psy7767 151 EEVFSSTKTLWFSPDGS 167 (200)
Q Consensus 151 EEi~~~~~~~~WSPDGk 167 (200)
+....++.++|||+
T Consensus 90 ---~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 90 ---FYLPHGLSIDTDGN 103 (329)
T ss_dssp ---CSSEEEEEECTTSC
T ss_pred ---cCCceEEEECCCCC
Confidence 23456788999998
No 189
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=90.79 E-value=0.49 Score=42.76 Aligned_cols=65 Identities=11% Similarity=0.048 Sum_probs=40.9
Q ss_pred eeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767 99 QLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS 167 (200)
Q Consensus 99 s~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk 167 (200)
....++|||+++.... .++|.+.|+.+.+..+-..-|. ...++.|+|||+
T Consensus 322 ~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-------------------~P~gia~spDg~ 382 (426)
T 3c75_H 322 QQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-------------------EIDSINVSQDAE 382 (426)
T ss_dssp SCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-------------------EECEEEECCSSS
T ss_pred eeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-------------------CcCeEEEccCCC
Confidence 3468999999864443 1369999988776542222121 245789999999
Q ss_pred EEEEEEE-cCCcceEE
Q psy7767 168 ILAYMKF-NDARVHNM 182 (200)
Q Consensus 168 ~Laf~r~-D~s~v~~~ 182 (200)
.++|+.. .++.+.++
T Consensus 383 ~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 383 PLLYALSAGTQTLHIY 398 (426)
T ss_dssp CEEEEEETTTTEEEEE
T ss_pred EEEEEEcCCCCeEEEE
Confidence 6667755 34444433
No 190
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=90.02 E-value=1.9 Score=34.45 Aligned_cols=58 Identities=17% Similarity=0.131 Sum_probs=33.0
Q ss_pred CceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
....++++|+++.|.++-. +.|++.++++...+.+...+ +....++.++|||++|.+.
T Consensus 123 ~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~------------------~~~P~gia~d~~~~~lyv~ 184 (267)
T 1npe_A 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDN------------------LGLPNGLTFDAFSSQLCWV 184 (267)
T ss_dssp SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTT------------------CSCEEEEEEETTTTEEEEE
T ss_pred CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECC------------------CCCCcEEEEcCCCCEEEEE
Confidence 3456677787776655532 35666666543333332211 1245678888988877554
No 191
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=90.00 E-value=0.53 Score=40.17 Aligned_cols=72 Identities=11% Similarity=0.009 Sum_probs=47.7
Q ss_pred CCCceeeEECc--------CCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767 95 SNFLQLVQWSP--------VGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD 165 (200)
Q Consensus 95 ~~~is~~~wSP--------DGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD 165 (200)
...+..++||| ||+.||-.. ++.|.+.++..+.......... +...++.|+|+
T Consensus 136 ~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~------------------~~v~~v~~~p~ 197 (393)
T 4gq1_A 136 HNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLS------------------SPGISVQFRPS 197 (393)
T ss_dssp SSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECS------------------SCEEEEEEETT
T ss_pred CCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCC------------------CCcEEEEECCC
Confidence 46689999998 899998875 4568888876554432222111 12246899999
Q ss_pred CCEEEEEEEcCCcceEEEE
Q psy7767 166 GSILAYMKFNDARVHNMSY 184 (200)
Q Consensus 166 Gk~Laf~r~D~s~v~~~~i 184 (200)
|..++.....++.+..+.+
T Consensus 198 ~~~~l~~~~~d~~v~~wd~ 216 (393)
T 4gq1_A 198 NPNQLIVGERNGNIRIFDW 216 (393)
T ss_dssp EEEEEEEEETTSEEEEEET
T ss_pred CCceEEecCCCCEEEEEEC
Confidence 9766556666666766643
No 192
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=89.63 E-value=0.66 Score=42.37 Aligned_cols=65 Identities=12% Similarity=0.040 Sum_probs=41.5
Q ss_pred CceeeEECcCCCEEEEEEc-CcEEEEECCCCCe-EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSI-NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~-~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
.+..++|||||+.++-... +.|.+.++..+.. ..+.... +...++.|||||+.|+- ..
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~-------------------~~V~sva~Sp~g~~l~S-gs 416 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE-------------------TTITAIGVSRLHPMVLA-GS 416 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS-------------------SCEEEEECCSSCCBCEE-EE
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC-------------------CceEEEEeCCCCCeEEE-EE
Confidence 3677899999998766543 3588888776653 3333211 13357899999998764 44
Q ss_pred cCCcceE
Q psy7767 175 NDARVHN 181 (200)
Q Consensus 175 D~s~v~~ 181 (200)
.++.+..
T Consensus 417 ~Dgtv~l 423 (524)
T 2j04_B 417 ADGSLII 423 (524)
T ss_dssp TTTEEEC
T ss_pred CCCEEEE
Confidence 4444443
No 193
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=89.35 E-value=1.1 Score=37.76 Aligned_cols=72 Identities=17% Similarity=0.061 Sum_probs=47.6
Q ss_pred CCCceeeEECc-CCCEEEEEE-cCcEEEEECCC---CCeE--EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767 95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDF---RSIN--ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS 167 (200)
Q Consensus 95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~---g~~~--rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk 167 (200)
...+..++|+| ||+.||-.. ++.|.+.++.+ +... .++.... +....+.|+|||+
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~------------------~~v~~~~~~~~~~ 124 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCS------------------STVTQITMIPNFD 124 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECS------------------SCEEEEEECTTSS
T ss_pred CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCC------------------CCEEEEEEeCCCC
Confidence 46789999999 999998875 46788887764 3211 1110000 1345789999999
Q ss_pred EEEEEEEcCCcceEEEEE
Q psy7767 168 ILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 168 ~Laf~r~D~s~v~~~~i~ 185 (200)
.|+ +...++.+..+.+.
T Consensus 125 ~l~-s~s~dg~i~vwd~~ 141 (437)
T 3gre_A 125 AFA-VSSKDGQIIVLKVN 141 (437)
T ss_dssp EEE-EEETTSEEEEEEEE
T ss_pred EEE-EEeCCCEEEEEEec
Confidence 876 44556677777664
No 194
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=88.92 E-value=1.3 Score=41.50 Aligned_cols=73 Identities=14% Similarity=0.077 Sum_probs=47.6
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccC--CCEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD--GSILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD--Gk~La 170 (200)
.+.+..++|||||+.|+... ++.|.+.++.++....+.. .+.. +....+.|||+ |+.|+
T Consensus 9 ~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~-----------------~~V~~l~~s~~~~~~~l~ 71 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHE-----------------GPVWRVDWAHPKFGTILA 71 (753)
T ss_dssp CCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCS-----------------SCEEEEEECCTTSCSEEE
T ss_pred cceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCc-----------------CceEEEEecCCCCCCEEE
Confidence 46789999999999988875 5778888876544333322 1110 13357889998 88776
Q ss_pred EEEEcCCcceEEEEE
Q psy7767 171 YMKFNDARVHNMSYI 185 (200)
Q Consensus 171 f~r~D~s~v~~~~i~ 185 (200)
.. ..++.+..+.+.
T Consensus 72 s~-s~Dg~I~vwd~~ 85 (753)
T 3jro_A 72 SC-SYDGKVLIWKEE 85 (753)
T ss_dssp EE-ETTSCEEEEEEE
T ss_pred EE-eCCCeEEEEECC
Confidence 44 445556666543
No 195
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=88.51 E-value=1.3 Score=43.01 Aligned_cols=69 Identities=13% Similarity=-0.023 Sum_probs=44.5
Q ss_pred CCCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 94 GSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 94 ~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
....+..++|||||+.||-.. ++.|.+.+..+++...... .. .....+.||| |++|+-
T Consensus 16 h~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~------------------~~V~~l~fsp-g~~L~S- 74 (902)
T 2oaj_A 16 MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DR------------------SAIKEMRFVK-GIYLVV- 74 (902)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SC------------------CCEEEEEEET-TTEEEE-
T ss_pred CCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CC------------------CCEEEEEEcC-CCEEEE-
Confidence 356789999999999998875 5688888776544332211 11 1234688999 886654
Q ss_pred EEcCCcceEEE
Q psy7767 173 KFNDARVHNMS 183 (200)
Q Consensus 173 r~D~s~v~~~~ 183 (200)
..+++.+..+.
T Consensus 75 ~s~D~~v~lWd 85 (902)
T 2oaj_A 75 INAKDTVYVLS 85 (902)
T ss_dssp EETTCEEEEEE
T ss_pred EECcCeEEEEE
Confidence 34445555443
No 196
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=88.22 E-value=1.9 Score=39.89 Aligned_cols=72 Identities=15% Similarity=-0.028 Sum_probs=40.0
Q ss_pred CCceeeEECcCCCEEEEEEc--CcEEEEECCC-CCeE---EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767 96 NFLQLVQWSPVGHDLIFVKD--NNLYQAYDDF-RSIN---ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL 169 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~~--gdLyv~~~~~-g~~~---rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L 169 (200)
....++.+||||+.|..... +.|.+.++.+ +..+ ++...|. ...+++.....+-+....+..||||++|
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~-----~~~~~~~~G~~~~ggPr~~~lSpDGk~L 395 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGI-----FHRADHPAGHKLTGAPQMLEISRDGRRV 395 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTT-----TTCBCCTTSCCCCSCCCCEEECTTSSEE
T ss_pred CceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCe-----eccccccccccCCCCCCEEEEcCCCCEE
Confidence 45688999999999754433 4788877753 2222 2222211 0001111001112346788999999988
Q ss_pred EEE
Q psy7767 170 AYM 172 (200)
Q Consensus 170 af~ 172 (200)
+..
T Consensus 396 yVa 398 (462)
T 2ece_A 396 YVT 398 (462)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 197
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=88.18 E-value=7.8 Score=32.93 Aligned_cols=57 Identities=7% Similarity=0.041 Sum_probs=35.9
Q ss_pred ceeeEECcCCCEEEEEEc---CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 98 LQLVQWSPVGHDLIFVKD---NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~~---gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+++.|++..|.++-. +.|+..++++.....+..++ +....++.++|++++|.++
T Consensus 161 P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~------------------~~~PnGla~d~~~~~lY~a 220 (349)
T 3v64_C 161 PRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH------------------LFWPNGLTIDYAGRRMYWV 220 (349)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSS------------------CSCEEEEEEETTTTEEEEE
T ss_pred cceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECC------------------CCCcceEEEeCCCCEEEEE
Confidence 456678887777766643 34777776655444443322 1345678999988888665
No 198
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=88.05 E-value=2.2 Score=34.95 Aligned_cols=33 Identities=12% Similarity=0.012 Sum_probs=25.8
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCC
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRS 127 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~ 127 (200)
...+..++|+|||+.||-.. ++.|.+.++.++.
T Consensus 13 ~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~ 46 (316)
T 3bg1_A 13 EDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG 46 (316)
T ss_dssp -CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE
T ss_pred cCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC
Confidence 45789999999999988775 4678888877654
No 199
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=87.84 E-value=5 Score=32.88 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=21.8
Q ss_pred cCCCCCceeeEECcCCCEEEEEE--cCcEEEEECCCC
Q psy7767 92 LDGSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFR 126 (200)
Q Consensus 92 lt~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g 126 (200)
+..+.....++|+|+|+ |.++- ++.|+..+.+++
T Consensus 28 ~p~~~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g~ 63 (306)
T 2p4o_A 28 FPVNTFLENLASAPDGT-IFVTNHEVGEIVSITPDGN 63 (306)
T ss_dssp ECTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTCC
T ss_pred CCCCCCcceEEECCCCC-EEEEeCCCCeEEEECCCCc
Confidence 33345567889999987 44442 357887776543
No 200
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=87.83 E-value=2.8 Score=35.25 Aligned_cols=70 Identities=3% Similarity=-0.050 Sum_probs=44.2
Q ss_pred CceeeE--ECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 97 FLQLVQ--WSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 97 ~is~~~--wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
.+..+. ++|||+.|+... ++.|.+.++.+++..+....... -+....+.|||||+.|+-.
T Consensus 170 ~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h----------------~~~v~~~~~s~~~~~l~s~- 232 (437)
T 3gre_A 170 YAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPR----------------HGAVSSICIDEECCVLILG- 232 (437)
T ss_dssp CEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGG----------------GCCEEEEEECTTSCEEEEE-
T ss_pred CceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC----------------CCceEEEEECCCCCEEEEE-
Confidence 344444 778999988876 47899999987776544332100 0134578899999887644
Q ss_pred EcCCcceEEE
Q psy7767 174 FNDARVHNMS 183 (200)
Q Consensus 174 ~D~s~v~~~~ 183 (200)
..++.+..+.
T Consensus 233 ~~dg~i~iwd 242 (437)
T 3gre_A 233 TTRGIIDIWD 242 (437)
T ss_dssp ETTSCEEEEE
T ss_pred cCCCeEEEEE
Confidence 4445455543
No 201
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=87.20 E-value=2.6 Score=40.80 Aligned_cols=75 Identities=11% Similarity=0.038 Sum_probs=48.3
Q ss_pred CCCceeeEECcCCCEEEEEEc-CcEEEEECCCCCeEEEeeCCCcceEec-ccccceeeeeeeCCCcceEEc-----cCC-
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSINALTRDGIKGVLFN-GVADWVYEEEVFSSTKTLWFS-----PDG- 166 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~~rLT~dg~~~~~~n-G~pdwv~eEEi~~~~~~~~WS-----PDG- 166 (200)
...+..++||||| .||.... +.|.+.+++++....-..- .. .. |... ....+.|| |||
T Consensus 575 ~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~--~~--~~~gh~~---------~V~sv~Fs~~~~~~Dg~ 640 (902)
T 2oaj_A 575 KGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENI--RE--ISGAQSA---------CVTCIEFVIMEYGDDGY 640 (902)
T ss_dssp SCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEG--GG--TCSSCCC---------CEEEEEEEEEECTTSSS
T ss_pred CCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeeh--hH--hcccccc---------ceEEEEEEEEecCCCCC
Confidence 5678999999999 9888864 5689999876544211010 00 00 2222 24578899 997
Q ss_pred --CEEEEEEEcCCcceEEEE
Q psy7767 167 --SILAYMKFNDARVHNMSY 184 (200)
Q Consensus 167 --k~Laf~r~D~s~v~~~~i 184 (200)
++| +...+++.+..+.+
T Consensus 641 ~~~~l-~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 641 SSILM-VCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEE-EEEETTSEEEEEEE
T ss_pred cceEE-EEEecCCcEEEEEE
Confidence 455 46677777888876
No 202
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=86.90 E-value=4 Score=35.76 Aligned_cols=70 Identities=13% Similarity=0.026 Sum_probs=42.4
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
...+..++|||||+.|+-.. ++.|.+.++. ++..+...... .. ..+.+ ....++.|+|++..|+...
T Consensus 192 ~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~-~~-~~~~~---------~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 192 TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPP-FY-ESDHP---------VRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp GGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCT-TC-CTTSC---------EEEEEEEEEETTEEEEEEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCc-cc-CCCCc---------eeEEEEEEecCceEEEEEc
Confidence 45688999999999998775 5689999887 44332221110 00 00000 0234789999998775544
Q ss_pred EcC
Q psy7767 174 FND 176 (200)
Q Consensus 174 ~D~ 176 (200)
..+
T Consensus 260 ~~d 262 (434)
T 2oit_A 260 AAD 262 (434)
T ss_dssp ETT
T ss_pred cCC
Confidence 433
No 203
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=86.90 E-value=1.4 Score=40.88 Aligned_cols=61 Identities=15% Similarity=0.078 Sum_probs=39.6
Q ss_pred eeEECcCCCEEEEEEc---CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcC
Q psy7767 100 LVQWSPVGHDLIFVKD---NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFND 176 (200)
Q Consensus 100 ~~~wSPDGk~IAFV~~---gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~ 176 (200)
.+.|++|...++||.+ +.|.+.|.++++...-...|. ....+.+||||++| |+..++
T Consensus 158 ~~~~~~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-------------------~p~~v~~SpDGr~l-yv~~~d 217 (567)
T 1qks_A 158 QQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-------------------AVHISRLSASGRYL-FVIGRD 217 (567)
T ss_dssp SCCSCCCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-------------------CEEEEEECTTSCEE-EEEETT
T ss_pred ccccccCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-------------------CccceEECCCCCEE-EEEcCC
Confidence 4567778666777764 589999998877653333332 12367899999976 555544
Q ss_pred Ccce
Q psy7767 177 ARVH 180 (200)
Q Consensus 177 s~v~ 180 (200)
..+.
T Consensus 218 g~V~ 221 (567)
T 1qks_A 218 GKVN 221 (567)
T ss_dssp SEEE
T ss_pred CeEE
Confidence 4333
No 204
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=86.79 E-value=5.6 Score=34.38 Aligned_cols=58 Identities=7% Similarity=0.021 Sum_probs=38.9
Q ss_pred CceeeEECcCCCEEEEEEc---CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVKD---NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~---gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
....+++.|++..|.++-. +.|+..++++.....+...+ +....++.++|++++|.++
T Consensus 203 ~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~------------------~~~PnGlavd~~~~~lY~a 263 (386)
T 3v65_B 203 KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH------------------LFWPNGLTIDYAGRRMYWV 263 (386)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS------------------CSCEEEEEEEGGGTEEEEE
T ss_pred CCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC------------------CCCeeeEEEeCCCCEEEEE
Confidence 3467788998888877653 45888887766555554332 1245678888888887665
No 205
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=86.75 E-value=3.1 Score=38.95 Aligned_cols=72 Identities=15% Similarity=0.239 Sum_probs=48.0
Q ss_pred CCCceeeEECcC--CCEEEEEE-cCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccC--CCE
Q psy7767 95 SNFLQLVQWSPV--GHDLIFVK-DNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD--GSI 168 (200)
Q Consensus 95 ~~~is~~~wSPD--Gk~IAFV~-~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD--Gk~ 168 (200)
...+..++|+|+ |+.|+... ++.|.+.++.++....+.. .+.. +....+.|||+ |+.
T Consensus 53 ~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~-----------------~~V~~v~~sp~~~~~~ 115 (753)
T 3jro_A 53 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS-----------------ASVNSVQWAPHEYGPL 115 (753)
T ss_dssp SSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS-----------------SCEEEEEECCGGGCSE
T ss_pred cCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCC-----------------CCeEEEEECCCCCCCE
Confidence 467899999998 99888876 5789999988775332222 1110 13457899999 887
Q ss_pred EEEEEEcCCcceEEEE
Q psy7767 169 LAYMKFNDARVHNMSY 184 (200)
Q Consensus 169 Laf~r~D~s~v~~~~i 184 (200)
|+.. ..++.+..+.+
T Consensus 116 l~sg-s~dg~I~vwdl 130 (753)
T 3jro_A 116 LLVA-SSDGKVSVVEF 130 (753)
T ss_dssp EEEE-ETTSEEEEEEC
T ss_pred EEEE-eCCCcEEEEEe
Confidence 7654 45555665554
No 206
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=86.64 E-value=2.8 Score=37.32 Aligned_cols=52 Identities=13% Similarity=-0.029 Sum_probs=32.2
Q ss_pred cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEE
Q psy7767 115 DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSY 184 (200)
Q Consensus 115 ~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i 184 (200)
++-|.+.++.+|+..+.-..... .....+.|||||++|+ ...+++.+.++.+
T Consensus 304 DgTIkIWDl~tGk~l~tL~gH~~-----------------~vvs~vafSPDG~~La-SGS~D~TIklWd~ 355 (356)
T 2w18_A 304 SGTIAIWDLLLGQCTALLPPVSD-----------------QHWSFVKWSGTDSHLL-AGQKDGNIFVYHY 355 (356)
T ss_dssp TSCEEEEETTTCSEEEEECCC-------------------CCCCEEEECSSSSEEE-EECTTSCEEEEEE
T ss_pred CCcEEEEECCCCcEEEEecCCCC-----------------CeEEEEEECCCCCEEE-EEECCCcEEEecC
Confidence 56788888888775433221110 0123478999999886 4456677777653
No 207
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=85.12 E-value=4.1 Score=33.98 Aligned_cols=88 Identities=8% Similarity=0.065 Sum_probs=47.1
Q ss_pred CCceeeEECcCCCEEEEE-----EcCcEEEEECCCCCeEEEeeC--CC----cceEecccccceeee--e---eeCCCcc
Q psy7767 96 NFLQLVQWSPVGHDLIFV-----KDNNLYQAYDDFRSINALTRD--GI----KGVLFNGVADWVYEE--E---VFSSTKT 159 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV-----~~gdLyv~~~~~g~~~rLT~d--g~----~~~~~nG~pdwv~eE--E---i~~~~~~ 159 (200)
....+++++|++..+.+. ..+.|++.+.++++..++... +. ..+...|..-+.... . +.....+
T Consensus 120 ~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~g 199 (343)
T 2qe8_A 120 SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNG 199 (343)
T ss_dssp CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEE
T ss_pred cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccce
Confidence 345788999987765444 235799999988877765532 00 011112211000000 0 0012467
Q ss_pred eEEccCCCEEEEEEEcCCcceEEEEE
Q psy7767 160 LWFSPDGSILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 160 ~~WSPDGk~Laf~r~D~s~v~~~~i~ 185 (200)
+.|||||+.|++...... .++.+.
T Consensus 200 ia~s~dg~~ly~~~~~~~--~l~~~~ 223 (343)
T 2qe8_A 200 IVLDAENEWLYLSPMHST--SMYRIK 223 (343)
T ss_dssp EEECTTSCEEEEEESSCS--EEEEEE
T ss_pred eEeccCCCEEEEEeCCCC--eEEEEE
Confidence 999999998876543322 444443
No 208
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=85.04 E-value=4.9 Score=31.88 Aligned_cols=36 Identities=6% Similarity=0.004 Sum_probs=23.8
Q ss_pred CceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEe
Q psy7767 97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALT 132 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT 132 (200)
....++|+|+++.|.++- ++.|++.+.+++....+.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 74 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII 74 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE
Confidence 356778888888876664 346888777765544433
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=84.99 E-value=4.6 Score=36.03 Aligned_cols=59 Identities=10% Similarity=0.088 Sum_probs=41.3
Q ss_pred ceeecCCCCCceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767 88 DVSDLDGSNFLQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP 164 (200)
Q Consensus 88 ~v~~lt~~~~is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP 164 (200)
-+.++..+.....+.+||||+...|+. +++|.+.|..+++..+-...+ +....+.+||
T Consensus 323 v~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-------------------~~p~~l~~s~ 383 (386)
T 3sjl_D 323 RLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-------------------GHGPQVITTA 383 (386)
T ss_dssp EEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-------------------CSSCCEEEEC
T ss_pred EEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-------------------CCCceeEECC
Confidence 344454455677899999999888886 357999999887765333322 2456678888
Q ss_pred C
Q psy7767 165 D 165 (200)
Q Consensus 165 D 165 (200)
|
T Consensus 384 d 384 (386)
T 3sjl_D 384 D 384 (386)
T ss_dssp C
T ss_pred c
Confidence 7
No 210
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=83.57 E-value=4.4 Score=34.31 Aligned_cols=57 Identities=11% Similarity=0.003 Sum_probs=35.3
Q ss_pred ceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 98 LQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+++.|++..|.++- .+.|+..++++...+.+...+ +....++.++|++++|.++
T Consensus 124 P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~------------------l~~Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 124 PRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE------------------IYWPNGLTLDYEEQKLYWA 183 (318)
T ss_dssp EEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS------------------CSCEEEEEEETTTTEEEEE
T ss_pred ccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC------------------CCCccEEEEeccCCEEEEE
Confidence 35567777777766664 245777766654444443222 2345678999998888665
No 211
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=82.82 E-value=18 Score=31.36 Aligned_cols=57 Identities=9% Similarity=0.044 Sum_probs=38.6
Q ss_pred ceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 98 LQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+++.|.+..|.++- .+.|+..++++.....+...+ +....++.++|++++|.++
T Consensus 204 P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~------------------l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 204 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN------------------IQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp EEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSS------------------CSCEEEEEEETTTTEEEEE
T ss_pred cceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECC------------------CCceEEEEEEeCCCEEEEE
Confidence 46678888888877765 246888887766555554322 1245678899988888665
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=82.72 E-value=5.5 Score=34.71 Aligned_cols=54 Identities=6% Similarity=-0.106 Sum_probs=34.7
Q ss_pred ceeeEECcCCCEEEEEEc--CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 98 LQLVQWSPVGHDLIFVKD--NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~~--gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...++|+|+|+ |.++-. +.|++.+.+++....+...+. ... +.|+|||+.|+..
T Consensus 133 P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~~~~~~~~~-------------------~~~-ia~~~~g~~l~~~ 188 (409)
T 3hrp_A 133 MWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTVHPGFK-------------------GGK-PAVTKDKQRVYSI 188 (409)
T ss_dssp EEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEEEETCC-------------------BCB-CEECTTSSEEEEE
T ss_pred ceEEEEeCCCC-EEEEecCCCcEEEEECCCCEEEEeeccCC-------------------CCc-eeEecCCCcEEEE
Confidence 46778899887 333322 468888877776665554321 223 7899999876443
No 213
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=82.48 E-value=16 Score=33.55 Aligned_cols=35 Identities=9% Similarity=-0.097 Sum_probs=25.0
Q ss_pred ceeeEECcCCCEEEEEE---------------------cCcEEEEECCCCCeEEEee
Q psy7767 98 LQLVQWSPVGHDLIFVK---------------------DNNLYQAYDDFRSINALTR 133 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~---------------------~gdLyv~~~~~g~~~rLT~ 133 (200)
..++.|+|+++ +.+++ ++.|.+.++++++..+-..
T Consensus 190 ~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~ 245 (462)
T 2ece_A 190 AYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT 245 (462)
T ss_dssp CCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred cceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence 35688999999 55666 4689999998775544333
No 214
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=82.34 E-value=6 Score=31.24 Aligned_cols=68 Identities=24% Similarity=0.138 Sum_probs=34.1
Q ss_pred CceeeEECcCCCEEEEEEc-C-cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVKD-N-NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~-g-dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
....++++|||+.++=... + .|.+.+.++.....+..... .....++.++|||+ |. +..
T Consensus 208 ~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~-----------------~~~~~~i~~~~~g~-l~-vs~ 268 (286)
T 1q7f_A 208 YPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVK-----------------HAQCFDVALMDDGS-VV-LAS 268 (286)
T ss_dssp SEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSC-----------------CSCEEEEEEETTTE-EE-EEE
T ss_pred CCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCC-----------------CCcceeEEECCCCc-EE-EEC
Confidence 3456677777753222222 2 56666544333333332111 01234789999995 53 434
Q ss_pred cCCcceEEE
Q psy7767 175 NDARVHNMS 183 (200)
Q Consensus 175 D~s~v~~~~ 183 (200)
.+..+..|.
T Consensus 269 ~~~~v~v~~ 277 (286)
T 1q7f_A 269 KDYRLYIYR 277 (286)
T ss_dssp TTTEEEEEE
T ss_pred CCCeEEEEE
Confidence 445555554
No 215
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=81.73 E-value=8.9 Score=31.89 Aligned_cols=57 Identities=9% Similarity=0.018 Sum_probs=34.4
Q ss_pred ceeeEECcCCCEEEEEEc---CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 98 LQLVQWSPVGHDLIFVKD---NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~~---gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+++.|++..|.++-. +.|+..++++...+.+...+ +....++.++|++++|.++
T Consensus 122 P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~------------------~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN------------------IQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS------------------CSCEEEEEEETTTTEEEEE
T ss_pred cceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECC------------------CCCceEEEEeccCCEEEEE
Confidence 456677777776655532 35676666554443333211 2345678899998888665
No 216
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=81.32 E-value=4.6 Score=38.43 Aligned_cols=57 Identities=19% Similarity=0.264 Sum_probs=34.2
Q ss_pred eeeEECcCCCEEEEEEcC--------------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767 99 QLVQWSPVGHDLIFVKDN--------------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP 164 (200)
Q Consensus 99 s~~~wSPDGk~IAFV~~g--------------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP 164 (200)
-++.+.|+|. |-|..++ .||..+.++|+.+++...+. +....++.|||
T Consensus 479 DnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~-----------------~aEpnGiafSP 540 (592)
T 4a9v_A 479 DGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-----------------GCEVTGISFSP 540 (592)
T ss_dssp EEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT-----------------TCEEEEEEECT
T ss_pred CceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC-----------------CccccCCEECC
Confidence 4567777764 4443321 56666666666666654221 01346889999
Q ss_pred CCCEEEEEEE
Q psy7767 165 DGSILAYMKF 174 (200)
Q Consensus 165 DGk~Laf~r~ 174 (200)
|+++| |+..
T Consensus 541 D~ktL-fV~v 549 (592)
T 4a9v_A 541 DQKTL-FVGI 549 (592)
T ss_dssp TSSEE-EEEE
T ss_pred CCCEE-EEEE
Confidence 99987 4543
No 217
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=81.04 E-value=5.8 Score=32.49 Aligned_cols=18 Identities=17% Similarity=0.019 Sum_probs=13.7
Q ss_pred CCCcceEEccCCCEEEEE
Q psy7767 155 SSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 155 ~~~~~~~WSPDGk~Laf~ 172 (200)
....++.|+|||+.|.+.
T Consensus 185 ~~p~gia~~~dg~~lyv~ 202 (322)
T 2fp8_A 185 HVPGGAEVSADSSFVLVA 202 (322)
T ss_dssp SCCCEEEECTTSSEEEEE
T ss_pred ccCcceEECCCCCEEEEE
Confidence 356678999999877554
No 218
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=80.28 E-value=7.4 Score=30.68 Aligned_cols=34 Identities=9% Similarity=0.039 Sum_probs=20.5
Q ss_pred CceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEe
Q psy7767 97 FLQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALT 132 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT 132 (200)
....++++|||+ | |+. ++.|++.+.++.....+.
T Consensus 165 ~p~~i~~~~~g~-l-~v~~~~~~~i~~~~~~g~~~~~~~ 201 (286)
T 1q7f_A 165 FPNGVVVNDKQE-I-FISDNRAHCVKVFNYEGQYLRQIG 201 (286)
T ss_dssp SEEEEEECSSSE-E-EEEEGGGTEEEEEETTCCEEEEES
T ss_pred CcEEEEECCCCC-E-EEEECCCCEEEEEcCCCCEEEEEc
Confidence 356778888887 3 343 356887776544334443
No 219
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=79.90 E-value=6.6 Score=30.42 Aligned_cols=27 Identities=11% Similarity=0.164 Sum_probs=16.5
Q ss_pred CCcceEEccCCCEEEEEEEcCCcceEEE
Q psy7767 156 STKTLWFSPDGSILAYMKFNDARVHNMS 183 (200)
Q Consensus 156 ~~~~~~WSPDGk~Laf~r~D~s~v~~~~ 183 (200)
...++.++|||+ |...-.....+..+.
T Consensus 235 ~p~~i~~~~~g~-l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 235 TPLAVAVDSDRT-VYVADRGNDRVVKLT 261 (270)
T ss_dssp CEEEEEECTTCC-EEEEEGGGTEEEEEC
T ss_pred CceeEEECCCCC-EEEEECCCCEEEEEc
Confidence 456789999996 544434444455444
No 220
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=79.73 E-value=22 Score=29.93 Aligned_cols=64 Identities=11% Similarity=-0.007 Sum_probs=43.7
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
........++|+|+.|+-..++.|.+.++.+++..+-...+.. +....+.|+ |+.|+....
T Consensus 391 ~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~~~~~~~-----------------~~v~~v~~~--~~~l~~~~~ 451 (464)
T 3v7d_B 391 TNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDA-----------------DQIWSVNFK--GKTLVAAVE 451 (464)
T ss_dssp TTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEESCTTTTC-----------------SEEEEEEEE--TTEEEEEEE
T ss_pred CCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEehhhccCC-----------------CcEEEEEec--CCEEEEEEE
Confidence 4456778999999999998999999999998876543211110 123356675 677776655
Q ss_pred cCC
Q psy7767 175 NDA 177 (200)
Q Consensus 175 D~s 177 (200)
+++
T Consensus 452 ~~g 454 (464)
T 3v7d_B 452 KDG 454 (464)
T ss_dssp ETT
T ss_pred eCC
Confidence 554
No 221
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=79.69 E-value=5.7 Score=37.59 Aligned_cols=58 Identities=21% Similarity=0.313 Sum_probs=35.2
Q ss_pred eeeEECcCCCEEEEEE-------------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767 99 QLVQWSPVGHDLIFVK-------------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD 165 (200)
Q Consensus 99 s~~~wSPDGk~IAFV~-------------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD 165 (200)
-.++++|+|+.+.-.= ++.+++.+...|+..|+...+. | ....+++||||
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~------g-----------aE~TG~~fspD 541 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI------G-----------CEVTGISFSPD 541 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT------T-----------CEEEEEEECTT
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC------C-----------ccCcCeeECCC
Confidence 4567888887322221 1246666666677776665331 0 12468999999
Q ss_pred CCEEEEEEE
Q psy7767 166 GSILAYMKF 174 (200)
Q Consensus 166 Gk~Laf~r~ 174 (200)
|++| |+..
T Consensus 542 g~tl-fvni 549 (592)
T 3zwu_A 542 QKTL-FVGI 549 (592)
T ss_dssp SSEE-EEEE
T ss_pred CCEE-EEEE
Confidence 9987 5543
No 222
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=78.12 E-value=13 Score=31.09 Aligned_cols=44 Identities=16% Similarity=0.320 Sum_probs=30.9
Q ss_pred ecCC-CCCceeeEECcCCCEEEEEEcC--cEEEEECCCCCeEEEeeC
Q psy7767 91 DLDG-SNFLQLVQWSPVGHDLIFVKDN--NLYQAYDDFRSINALTRD 134 (200)
Q Consensus 91 ~lt~-~~~is~~~wSPDGk~IAFV~~g--dLyv~~~~~g~~~rLT~d 134 (200)
.+.. ...++.++|+|+++.|.-|.+. .|+..+..+...+++.-+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~ 67 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLD 67 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECS
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecC
Confidence 4442 3578999999999998877654 699999884334455433
No 223
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=77.74 E-value=12 Score=30.63 Aligned_cols=35 Identities=14% Similarity=0.003 Sum_probs=24.0
Q ss_pred CceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEe
Q psy7767 97 FLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALT 132 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT 132 (200)
...++.++|||+.++ ..++.|+..+.++....++.
T Consensus 38 ~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~ 72 (276)
T 3no2_A 38 ECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIA 72 (276)
T ss_dssp CCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEE
T ss_pred CCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEc
Confidence 567888999998776 55677888887433333444
No 224
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=77.39 E-value=19 Score=31.69 Aligned_cols=59 Identities=8% Similarity=0.064 Sum_probs=32.9
Q ss_pred CceeeEECcCCCEEEEEE--cCcEEEEECCCCCe-EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSI-NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~-~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
....+++.|++..|.+.. ++.|+..+.+++.. ..+...+.. .....+.|+|||++|.++
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~-----------------~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTK-----------------GSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCC-----------------SSCEEEEECTTSSEEEEE
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCC-----------------CCcccEEEeCCCCEEEEE
Confidence 345667788544443332 24577776665554 333332210 123358999999977655
No 225
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=76.37 E-value=26 Score=30.93 Aligned_cols=59 Identities=12% Similarity=0.066 Sum_probs=37.0
Q ss_pred CceeeEECcCCCEEEEE-EcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767 97 FLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN 175 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D 175 (200)
.+.+.++.|.. +|-+ .+|.|++.++.++...++.. ..+.++|||+| ++....|
T Consensus 128 ~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~~~~----------------------~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 128 PVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQLAQ----------------------NVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp CEEEEEECSSE--EEEEETTSEEEEEETTTCCEEEEEE----------------------SEEEEEECSSE--EEEEETT
T ss_pred ceeeEEecCCC--EEEEECCCCEEEEEccCCccccccC----------------------CceEEEEcCCc--eEEEEcC
Confidence 35565666543 4444 57899999998777655432 23478999999 4444343
Q ss_pred CCcceEE
Q psy7767 176 DARVHNM 182 (200)
Q Consensus 176 ~s~v~~~ 182 (200)
+.+.+|
T Consensus 182 -g~i~~~ 187 (388)
T 1xip_A 182 -RSFQSF 187 (388)
T ss_dssp -SCEEEE
T ss_pred -CcEEEE
Confidence 445555
No 226
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=75.78 E-value=6.7 Score=31.06 Aligned_cols=13 Identities=8% Similarity=-0.184 Sum_probs=9.8
Q ss_pred CceeeEECcCCCE
Q psy7767 97 FLQLVQWSPVGHD 109 (200)
Q Consensus 97 ~is~~~wSPDGk~ 109 (200)
.+..++++|||+.
T Consensus 118 ~~~~i~~d~~g~l 130 (314)
T 1pjx_A 118 GCNDCAFDYEGNL 130 (314)
T ss_dssp CCCEEEECTTSCE
T ss_pred CCcCEEECCCCCE
Confidence 4577888999864
No 227
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=75.68 E-value=10 Score=29.27 Aligned_cols=53 Identities=15% Similarity=0.138 Sum_probs=31.5
Q ss_pred CCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767 96 NFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS 167 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk 167 (200)
.....++++|||+ |.+.. ++.|++.+.+++....+...+ +....++.++|||+
T Consensus 67 ~~p~~i~~~~~g~-l~v~~~~~~i~~~d~~~~~~~~~~~~~------------------~~~p~~i~~~~~g~ 120 (270)
T 1rwi_B 67 YQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSNNQTVLPFDG------------------LNYPEGLAVDTQGA 120 (270)
T ss_dssp CSCCCEEECTTCC-EEEEETTTEEEEECTTCSCCEECCCCS------------------CSSEEEEEECTTCC
T ss_pred CCcceeEECCCCC-EEEEcCCCEEEEEeCCCceEeeeecCC------------------cCCCcceEECCCCC
Confidence 3457788999988 33332 457888876655443332211 11345677888886
No 228
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=74.82 E-value=19 Score=29.41 Aligned_cols=31 Identities=13% Similarity=0.117 Sum_probs=19.9
Q ss_pred CCCcceEEccCCCEEEEEEEcCCcceEEEEEe
Q psy7767 155 SSTKTLWFSPDGSILAYMKFNDARVHNMSYIH 186 (200)
Q Consensus 155 ~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~ 186 (200)
....++.++||| .|...-.....+..+.+.-
T Consensus 292 ~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 292 DMPHDIVASEDG-TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp SSEEEEEECTTS-EEEEEESSSCCEEEEEEEE
T ss_pred CCeeEEEECCCC-CEEEEECCCCEEEEEeCCc
Confidence 456788999999 5644444445566665543
No 229
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=74.78 E-value=10 Score=33.33 Aligned_cols=56 Identities=9% Similarity=0.158 Sum_probs=32.9
Q ss_pred ceeeEECc-CCCEEEEEEc-CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 98 LQLVQWSP-VGHDLIFVKD-NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 98 is~~~wSP-DGk~IAFV~~-gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...++++| +++.|.++-. +.|++.+++++....+... +....++.|+|||++|...
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~-------------------~~~P~~ia~d~~G~~lyva 196 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSG-------------------LSKVRTICWTHEADSMIIT 196 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECC-------------------CSCEEEEEECTTSSEEEEE
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecC-------------------CCCcceEEEeCCCCEEEEE
Confidence 35667777 4555444433 4566666665554444331 1356678999999877444
No 230
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=74.03 E-value=7.9 Score=34.44 Aligned_cols=60 Identities=10% Similarity=-0.067 Sum_probs=32.5
Q ss_pred CceeeEECc---CCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767 97 FLQLVQWSP---VGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY 171 (200)
Q Consensus 97 ~is~~~wSP---DGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf 171 (200)
....++||| ||+.||=.. ++.|.+.++.+|+..+.-..+.... .......|||||+.++.
T Consensus 180 ~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v---------------~~v~~vafSpdG~~lvs 243 (356)
T 2w18_A 180 EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQ---------------ASVCHKAYSEMGLLFIV 243 (356)
T ss_dssp SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC------------------CCCEEEEEEETTEEEEE
T ss_pred ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcce---------------eeeEEEEECCCCCEEEE
Confidence 344556666 445555433 5678888888877543333221000 12234578898887754
No 231
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=73.87 E-value=15 Score=31.01 Aligned_cols=66 Identities=12% Similarity=-0.091 Sum_probs=39.5
Q ss_pred CCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEE-EeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767 96 NFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINA-LTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~r-LT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r 173 (200)
..+..+.| +|+.|+-.. ++.|.+.++.+++..+ +...... +. -+....+.|||||..||...
T Consensus 363 ~~v~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-----~~---------~~~v~~~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 363 SAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG-----GS---------GGVVWRIRASNTKLVCAVGS 426 (445)
T ss_dssp SCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTG-----GG---------TCEEEEEEECSSEEEEEEEC
T ss_pred CCEEEEEE--CCCEEEEEeCCCeEEEEECCCCceeeeeeccccC-----CC---------CceEEEEEecCCEEEEEEcc
Confidence 34566666 467776665 5679999998876543 3221100 00 01245789999998887665
Q ss_pred EcCC
Q psy7767 174 FNDA 177 (200)
Q Consensus 174 ~D~s 177 (200)
.|..
T Consensus 427 ~dg~ 430 (445)
T 2ovr_B 427 RNGT 430 (445)
T ss_dssp SSSS
T ss_pred cCCC
Confidence 5543
No 232
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=73.12 E-value=8.7 Score=33.72 Aligned_cols=30 Identities=17% Similarity=0.263 Sum_probs=21.1
Q ss_pred CCCcceEEccCCCEEEEEEEcCCcceEEEE
Q psy7767 155 SSTKTLWFSPDGSILAYMKFNDARVHNMSY 184 (200)
Q Consensus 155 ~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i 184 (200)
...+++.|||||++|.+.-.....+..|.+
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEK 250 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEE
Confidence 567889999999998766544444554544
No 233
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=72.20 E-value=9.4 Score=30.19 Aligned_cols=37 Identities=5% Similarity=-0.071 Sum_probs=26.1
Q ss_pred CceeeEECcCCCEEEE--------EEcCcEEEEECCCCCeEEEee
Q psy7767 97 FLQLVQWSPVGHDLIF--------VKDNNLYQAYDDFRSINALTR 133 (200)
Q Consensus 97 ~is~~~wSPDGk~IAF--------V~~gdLyv~~~~~g~~~rLT~ 133 (200)
....++|+|||+..+- ..++.|++.+..+++...+..
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 63 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK 63 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe
Confidence 4578899999964433 345679999877777665553
No 234
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=71.74 E-value=42 Score=27.85 Aligned_cols=115 Identities=13% Similarity=0.092 Sum_probs=58.6
Q ss_pred eeeeeeeeeeeeecceEEEEeccCcceeEEEEEeeeeeeeeeecCCCCccceeec--CCCCCceeeEECcCCCEEEEEE-
Q psy7767 38 SIRCLTWKQSEYWDYNLYLQRSTDIALKLSIRCLTWKQSHSLSGRPDTLTDVSDL--DGSNFLQLVQWSPVGHDLIFVK- 114 (200)
Q Consensus 38 ~~~~~~~~~~~~~~~~~y~~~~~~~~~kv~i~~n~~~~R~s~~a~~~~~~~v~~l--t~~~~is~~~wSPDGk~IAFV~- 114 (200)
-+.+|+|... ++.||++... .+ -.+.++.++. -++++ ....+.-.+++.++|. ++.+.
T Consensus 28 ~lSGla~~~~---~~~L~aV~d~-~~--~I~~ld~~g~------------v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E 88 (255)
T 3qqz_A 28 NISSLTWSAQ---SNTLFSTINK-PA--AIVEMTTNGD------------LIRTIPLDFVKDLETIEYIGDNQ-FVISDE 88 (255)
T ss_dssp CEEEEEEETT---TTEEEEEEET-TE--EEEEEETTCC------------EEEEEECSSCSSEEEEEECSTTE-EEEEET
T ss_pred CcceeEEeCC---CCEEEEEECC-CC--eEEEEeCCCC------------EEEEEecCCCCChHHeEEeCCCE-EEEEEC
Confidence 3567877643 4678876654 22 1333333311 11222 1224566778888885 44443
Q ss_pred -cCcEEEEECCCCCe-E---EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEE
Q psy7767 115 -DNNLYQAYDDFRSI-N---ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 115 -~gdLyv~~~~~g~~-~---rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~ 185 (200)
++.|++..++.... . +++..-. ....| ....+++|+|++++|.. ........+|.+.
T Consensus 89 ~~~~l~~~~v~~~~~i~~~~~~~~~~~-~~~~N------------~g~EGLA~d~~~~~L~v-a~E~~p~~i~~~~ 150 (255)
T 3qqz_A 89 RDYAIYVISLTPNSEVKILKKIKIPLQ-ESPTN------------CGFEGLAYSRQDHTFWF-FKEKNPIEVYKVN 150 (255)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEECCCS-SCCCS------------SCCEEEEEETTTTEEEE-EEESSSEEEEEEE
T ss_pred CCCcEEEEEcCCCCeeeeeeeeccccc-ccccc------------CCcceEEEeCCCCEEEE-EECcCCceEEEEc
Confidence 45788877664432 1 1211000 00001 12358999999998854 4444455666665
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=70.15 E-value=33 Score=32.55 Aligned_cols=25 Identities=8% Similarity=0.200 Sum_probs=17.6
Q ss_pred eeecCCCCCceeeEE-C-cCCCEEEEEE
Q psy7767 89 VSDLDGSNFLQLVQW-S-PVGHDLIFVK 114 (200)
Q Consensus 89 v~~lt~~~~is~~~w-S-PDGk~IAFV~ 114 (200)
+..+..+++...+++ + |||++| |+.
T Consensus 127 ii~ip~g~~phg~~~~~~p~~~~v-~~~ 153 (595)
T 1fwx_A 127 ILEIPNAKGIHGLRPQKWPRSNYV-FCN 153 (595)
T ss_dssp EEECSSCCSEEEEEECCSSBCSEE-EEE
T ss_pred EEeCCCCCCCcceeeeecCCCcEE-EEe
Confidence 334545677777777 6 999997 665
No 236
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=68.09 E-value=26 Score=30.29 Aligned_cols=63 Identities=13% Similarity=0.086 Sum_probs=37.0
Q ss_pred CCceeeEECcCCCEEEEEEc-CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCC-c-ceEEccCCCEEEEE
Q psy7767 96 NFLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSST-K-TLWFSPDGSILAYM 172 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~-~-~~~WSPDGk~Laf~ 172 (200)
.....++++|++..|.+... +.|+..+.+++....+...+. .|. .+.. . ++.|+|++..|.+.
T Consensus 219 ~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~-----~g~---------~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLEL-----SGS---------LGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp SCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCC-----CSC---------CCCSSCCEEEEETTTTEEEEE
T ss_pred CCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccc-----cCC---------CCCCccccEEEeCCCCEEEEE
Confidence 44577899997667666432 468888887776544422111 000 0112 3 78999977677544
No 237
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=67.16 E-value=26 Score=29.50 Aligned_cols=71 Identities=10% Similarity=-0.033 Sum_probs=44.1
Q ss_pred CCCceeeEECcCCCEEEEE-EcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEc--cCCCEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS--PDGSILAY 171 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS--PDGk~Laf 171 (200)
...+..++|+|++ .|+-. .++.|.+.++++++..+...... +....+.|+ |||+.|+
T Consensus 162 ~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~------------------~~v~~l~~~~~~~~~~l~- 221 (464)
T 3v7d_B 162 DGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHN------------------STVRCLDIVEYKNIKYIV- 221 (464)
T ss_dssp SSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCS------------------SCEEEEEEEESSSCEEEE-
T ss_pred CcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCC------------------CccEEEEEecCCCCCEEE-
Confidence 5678999999999 44433 36789999998776554333111 122345566 6776665
Q ss_pred EEEcCCcceEEEEE
Q psy7767 172 MKFNDARVHNMSYI 185 (200)
Q Consensus 172 ~r~D~s~v~~~~i~ 185 (200)
....++.+..+.+.
T Consensus 222 s~s~d~~i~vwd~~ 235 (464)
T 3v7d_B 222 TGSRDNTLHVWKLP 235 (464)
T ss_dssp EEETTSCEEEEECC
T ss_pred EEcCCCcEEEeeCC
Confidence 44555666666544
No 238
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=67.14 E-value=48 Score=32.03 Aligned_cols=58 Identities=9% Similarity=-0.001 Sum_probs=35.8
Q ss_pred CceeeEECcCCCEEEEEEc---CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVKD---NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~---gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
....+++.|.+..|.++-. +.|++.++++...+.|...+ +....++..+|++++|+++
T Consensus 515 ~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~------------------l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 515 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN------------------IQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS------------------CSCEEEEEEETTTTEEEEE
T ss_pred CcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCC------------------CCCceEEEEecCCCeEEEE
Confidence 3567788888888766642 35888888766555554422 1234556666666666443
No 239
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=66.56 E-value=5.1 Score=37.95 Aligned_cols=19 Identities=5% Similarity=-0.022 Sum_probs=14.7
Q ss_pred CCCcceEEccCCCEEEEEE
Q psy7767 155 SSTKTLWFSPDGSILAYMK 173 (200)
Q Consensus 155 ~~~~~~~WSPDGk~Laf~r 173 (200)
....++.|+|++++|.++-
T Consensus 540 ~~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp SSCCCEEECTTTCCEEEEE
T ss_pred CCccEEEEeccCCEEEEEe
Confidence 3567899999998886653
No 240
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=65.14 E-value=26 Score=30.06 Aligned_cols=38 Identities=3% Similarity=0.010 Sum_probs=25.7
Q ss_pred CCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEee
Q psy7767 96 NFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTR 133 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~ 133 (200)
.....++|.|+++.|.++- ++.|+..+++++....+..
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 4467788888888876663 4568877777666555443
No 241
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=64.04 E-value=40 Score=28.41 Aligned_cols=38 Identities=3% Similarity=0.010 Sum_probs=25.4
Q ss_pred CCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEee
Q psy7767 96 NFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTR 133 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~ 133 (200)
.....++|.|+++.|.++- ++.|+..+++++....+..
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 112 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 112 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe
Confidence 3457778888888876663 4567777777665555443
No 242
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=63.21 E-value=20 Score=32.96 Aligned_cols=27 Identities=11% Similarity=0.158 Sum_probs=17.1
Q ss_pred ceeeEECcCCCEEEEEE--cCcEEEEECC
Q psy7767 98 LQLVQWSPVGHDLIFVK--DNNLYQAYDD 124 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~--~gdLyv~~~~ 124 (200)
...++.+|+++.|.++. ++.|++.+++
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 35667788777765554 3457777665
No 243
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=62.58 E-value=73 Score=29.62 Aligned_cols=37 Identities=3% Similarity=0.122 Sum_probs=23.7
Q ss_pred CceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEee
Q psy7767 97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTR 133 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~ 133 (200)
....++|.|+++.|.++- ++.|+..+++++....+..
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~ 76 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE 76 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe
Confidence 456778888887765553 3567777776655554444
No 244
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=62.52 E-value=60 Score=26.19 Aligned_cols=24 Identities=13% Similarity=0.094 Sum_probs=13.3
Q ss_pred CcceEEccCCCEEEEEEEcCCcceEE
Q psy7767 157 TKTLWFSPDGSILAYMKFNDARVHNM 182 (200)
Q Consensus 157 ~~~~~WSPDGk~Laf~r~D~s~v~~~ 182 (200)
..++ ||||++|.+.-.....+..+
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~ 194 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRI 194 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEE
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEE
Confidence 4455 89988775543333333333
No 245
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=61.40 E-value=9.2 Score=33.94 Aligned_cols=62 Identities=11% Similarity=0.002 Sum_probs=34.5
Q ss_pred CCceeeEECcCCCEEEEEEcCcEEEEECCCCCe--E-EEeeCCCcceEecccccceeeeee--eCCCcceEEccCCCEEE
Q psy7767 96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSI--N-ALTRDGIKGVLFNGVADWVYEEEV--FSSTKTLWFSPDGSILA 170 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~--~-rLT~dg~~~~~~nG~pdwv~eEEi--~~~~~~~~WSPDGk~La 170 (200)
..++.++|||+|+.++ ..+|.+.+...+++.. + .|..... + +||+ -....++.|+++++.|+
T Consensus 163 ~~Vs~v~WSpkG~~vg-~~dg~i~~~~~~~~~~~~k~~I~~Pp~-----------~-~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 163 QNVTSFDVTNSQLAVL-LKDRSFQSFAWRNGEMEKQFEFSLPSE-----------L-EELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp ESEEEEEECSSEEEEE-ETTSCEEEEEEETTEEEEEEEECCCHH-----------H-HTSCTTTSEEEEEEESSSSEEEE
T ss_pred CCceEEEEcCCceEEE-EcCCcEEEEcCCCccccccceecCCcc-----------c-ccccCCCeeEEEEEEecCCeEEE
Confidence 4789999999993322 2356666666655552 2 2321100 0 0000 01346789999998764
No 246
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=61.35 E-value=71 Score=26.65 Aligned_cols=28 Identities=14% Similarity=-0.117 Sum_probs=18.5
Q ss_pred EECcCCCEEEEEE--cCcEEEEECCCCCeE
Q psy7767 102 QWSPVGHDLIFVK--DNNLYQAYDDFRSIN 129 (200)
Q Consensus 102 ~wSPDGk~IAFV~--~gdLyv~~~~~g~~~ 129 (200)
.++++|++|..+. ++.+++.|.++.+..
T Consensus 70 Gi~~~g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 70 GLTLLNEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp EEEEETTEEEEEETTCSEEEEEETTTTEEE
T ss_pred EEEEeCCEEEEEEecCCEEEEEECCCCcEE
Confidence 4566777765444 567999888766543
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=61.07 E-value=11 Score=35.78 Aligned_cols=30 Identities=13% Similarity=-0.043 Sum_probs=20.9
Q ss_pred CCCceeeEECcCCCEEEEEEc---CcEEEEECCC
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKD---NNLYQAYDDF 125 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~---gdLyv~~~~~ 125 (200)
+...-...+||||+++ |+.+ +.|.+.+++.
T Consensus 276 g~~PhGv~~sPDGk~v-~V~~~~s~~VsVid~~~ 308 (595)
T 1fwx_A 276 ANNPHGCNMAPDKKHL-CVAGKLSPTVTVLDVTR 308 (595)
T ss_dssp ESSCCCEEECTTSSEE-EEECTTSSBEEEEEGGG
T ss_pred CCCceEEEEcCCCCEE-EEeCCCCCeEEEEECcc
Confidence 3445667899999996 4443 4788887763
No 248
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=58.99 E-value=83 Score=29.24 Aligned_cols=57 Identities=11% Similarity=0.049 Sum_probs=36.4
Q ss_pred CceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
....+++.|.+..|.|+- .+.|+..++++.....+..+ +....++..+|++++|.++
T Consensus 124 ~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~-------------------~~~P~GlalD~~~~~LY~a 183 (628)
T 4a0p_A 124 SPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPN-------------------VGRANGLTIDYAKRRLYWT 183 (628)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS-------------------CSSEEEEEEETTTTEEEEE
T ss_pred CcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECC-------------------CCCcceEEEccccCEEEEE
Confidence 346778888777776664 34688777776665555432 1245567778877777554
No 249
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=58.97 E-value=43 Score=30.79 Aligned_cols=59 Identities=8% Similarity=0.076 Sum_probs=36.9
Q ss_pred eeeEECc-CCCEEEEEEc--CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEE-------ccCCCE
Q psy7767 99 QLVQWSP-VGHDLIFVKD--NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF-------SPDGSI 168 (200)
Q Consensus 99 s~~~wSP-DGk~IAFV~~--gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W-------SPDGk~ 168 (200)
..++++| +++.|..+.+ +.|++.+++++....+...+... +.+...++| ++||++
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~---------------~~~p~~ia~~~~~~~~d~~G~~ 206 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIP---------------TNRIRSIAFNKKIEGYADEAEY 206 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSS---------------CSBEEEEEECCCBTTTBCTTCE
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccc---------------cCCCcEEEEeecccccCCCCCE
Confidence 4667888 4555433333 35777787777766665443211 235678899 999997
Q ss_pred EEEE
Q psy7767 169 LAYM 172 (200)
Q Consensus 169 Laf~ 172 (200)
|.+.
T Consensus 207 lyva 210 (496)
T 3kya_A 207 MIVA 210 (496)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7544
No 250
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=57.41 E-value=17 Score=32.85 Aligned_cols=71 Identities=4% Similarity=-0.071 Sum_probs=40.6
Q ss_pred CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcce--EEccCC-CEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTL--WFSPDG-SILA 170 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~--~WSPDG-k~La 170 (200)
...+..++|+|++ .||-.. ++.|.+.++.++.....+-.+- . +...++ .|+||| +.||
T Consensus 266 ~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H--------~---------~~V~sv~~~~s~~g~~~la 327 (524)
T 2j04_B 266 DSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVH--------D---------SYILSVSTAYSDFEDTVVS 327 (524)
T ss_dssp TTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECS--------S---------SCEEEEEEECCTTSCCEEE
T ss_pred CCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecc--------c---------ccEEEEEEEcCCCCCeEEE
Confidence 3567899999975 555443 5789999987653221111110 0 012344 579998 5554
Q ss_pred EEEEcCCcceEEEE
Q psy7767 171 YMKFNDARVHNMSY 184 (200)
Q Consensus 171 f~r~D~s~v~~~~i 184 (200)
....++.+.++.+
T Consensus 328 -S~S~D~tvklWD~ 340 (524)
T 2j04_B 328 -TVAVDGYFYIFNP 340 (524)
T ss_dssp -EEETTSEEEEECG
T ss_pred -EeccCCeEEEEEC
Confidence 5555566666543
No 251
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=56.97 E-value=27 Score=28.84 Aligned_cols=45 Identities=11% Similarity=0.046 Sum_probs=27.4
Q ss_pred EEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 109 DLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 109 ~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
.|.|..+++|...+++++....+.... ....++.|+|++++|.++
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~~~-------------------~~p~g~~~d~~~~~ly~~ 47 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIPNL-------------------RNVVALDTEVASNRIYWS 47 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEECSC-------------------SSEEEEEEETTTTEEEEE
T ss_pred EEEEECCCeEEEEECCCcceEehhcCC-------------------CceEEEEEEeCCCEEEEE
Confidence 466777778888888766554444321 133456677766666554
No 252
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=56.43 E-value=28 Score=29.46 Aligned_cols=60 Identities=25% Similarity=0.272 Sum_probs=36.4
Q ss_pred CcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeee---eCCCcceEEccCCCEEEEE
Q psy7767 104 SPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEV---FSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 104 SPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi---~~~~~~~~WSPDGk~Laf~ 172 (200)
+|.| ++| .++++|+.+..++...++..++....+..+ ..+++ +++..++.+.|||. |.++
T Consensus 269 ap~G--~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~-----~~~~~~~~~~rp~~v~~~pdG~-lyv~ 331 (352)
T 2ism_A 269 PPGN--LAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVL-----RVETALSGFGRLREVQVGPDGA-LYVT 331 (352)
T ss_dssp CEEE--EEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEE-----EEEEEEESSCCEEEEEECTTSC-EEEE
T ss_pred CCcc--eEE-ECCEEEEEECCCCEEEEEEECCCCcceeec-----chheecccCCCeeEEEECCCCc-EEEE
Confidence 5555 555 688999999888777777754321110000 01221 35778899999994 6444
No 253
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=54.85 E-value=39 Score=29.65 Aligned_cols=56 Identities=13% Similarity=0.164 Sum_probs=33.2
Q ss_pred ceeeEECcC--CCEEEEEEc-CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767 98 LQLVQWSPV--GHDLIFVKD-NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF 174 (200)
Q Consensus 98 is~~~wSPD--Gk~IAFV~~-gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~ 174 (200)
...++|+|+ +..|.++-. +.|+..+.+++....+... +....++.++|||+ | |+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~-------------------~~~P~giavd~dG~-l-yVad 199 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTN-------------------IGQCADVNFTLNGD-M-VVVD 199 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCC-------------------CSCEEEEEECTTCC-E-EEEE
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecC-------------------CCCccEEEECCCCC-E-EEEc
Confidence 356788885 444433322 5677776665555544331 23466889999998 5 4443
No 254
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=53.80 E-value=67 Score=27.88 Aligned_cols=37 Identities=14% Similarity=0.003 Sum_probs=23.7
Q ss_pred CCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEe
Q psy7767 96 NFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALT 132 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT 132 (200)
.....+++.|||+.++=-+ .+.|++.+.+++....+.
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~ 69 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELG 69 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeec
Confidence 3457889999998433333 567888866556554443
No 255
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=52.73 E-value=33 Score=28.31 Aligned_cols=26 Identities=8% Similarity=0.115 Sum_probs=18.8
Q ss_pred ceeeEECcCCCEEEEEE--cCcEEEEEC
Q psy7767 98 LQLVQWSPVGHDLIFVK--DNNLYQAYD 123 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~--~gdLyv~~~ 123 (200)
...++|||||+.|.|.. ++.||..+.
T Consensus 197 ~~gia~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp EEEEEECTTSCEEEEEESSCSEEEEEEH
T ss_pred cceeEeccCCCEEEEEeCCCCeEEEEEH
Confidence 46689999999887664 346777653
No 256
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=52.58 E-value=91 Score=26.21 Aligned_cols=24 Identities=8% Similarity=0.133 Sum_probs=16.7
Q ss_pred CceeeEECcCCCEEEEEE--cCcEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVK--DNNLYQAY 122 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~--~gdLyv~~ 122 (200)
....++|.|||+ +||. .+.|++.+
T Consensus 32 ~P~~ia~~pdG~--l~V~e~~g~I~~i~ 57 (352)
T 2ism_A 32 VPWALAFLPDGG--MLIAERPGRIRLFR 57 (352)
T ss_dssp CEEEEEECTTSC--EEEEETTTEEEEEE
T ss_pred CceEEEEcCCCe--EEEEeCCCeEEEEE
Confidence 456789999998 3443 45777776
No 257
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=49.92 E-value=1.1e+02 Score=25.42 Aligned_cols=35 Identities=11% Similarity=0.180 Sum_probs=25.4
Q ss_pred CceeeEECcCCCEEEEEEc-----CcEEEEECCCCCeEEEee
Q psy7767 97 FLQLVQWSPVGHDLIFVKD-----NNLYQAYDDFRSINALTR 133 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~-----gdLyv~~~~~g~~~rLT~ 133 (200)
..+.+.++||| .+|+.. +.|.+.++++++..+-..
T Consensus 22 f~~Gl~~~~dg--~Lyvstg~~~~s~v~~iD~~tg~v~~~i~ 61 (266)
T 2iwa_A 22 FTQGLVYAEND--TLFESTGLYGRSSVRQVALQTGKVENIHK 61 (266)
T ss_dssp CEEEEEECSTT--EEEEEECSTTTCEEEEEETTTCCEEEEEE
T ss_pred CcccEEEeCCC--eEEEECCCCCCCEEEEEECCCCCEEEEEe
Confidence 45888999996 467653 479999999888765443
No 258
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=49.88 E-value=84 Score=24.02 Aligned_cols=29 Identities=10% Similarity=-0.037 Sum_probs=15.2
Q ss_pred ceeeEECcCCCEEEEEE---cCcEEEEECCCCCeE
Q psy7767 98 LQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSIN 129 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~ 129 (200)
...+.++|+|+ | |+. .+.|++.+. ++...
T Consensus 185 ~~~i~~~~~g~-l-~v~~~~~~~i~~~~~-~g~~~ 216 (299)
T 2z2n_A 185 PVGITKGNDDA-L-WFVEIIGNKIGRITT-SGEIT 216 (299)
T ss_dssp EEEEEECTTSS-E-EEEETTTTEEEEECT-TCCEE
T ss_pred ceeEEECCCCC-E-EEEccCCceEEEECC-CCcEE
Confidence 44566677766 2 332 245666665 44433
No 259
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=49.68 E-value=78 Score=27.46 Aligned_cols=12 Identities=8% Similarity=0.124 Sum_probs=10.0
Q ss_pred CCcceEEccCCC
Q psy7767 156 STKTLWFSPDGS 167 (200)
Q Consensus 156 ~~~~~~WSPDGk 167 (200)
...++.|.|+|+
T Consensus 203 Np~Gla~dp~G~ 214 (347)
T 3das_A 203 NVQGLAWDDKQR 214 (347)
T ss_dssp BCCEEEECTTCC
T ss_pred CcceEEECCCCC
Confidence 467899999986
No 260
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=49.11 E-value=85 Score=24.01 Aligned_cols=34 Identities=9% Similarity=0.228 Sum_probs=18.6
Q ss_pred CCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEE
Q psy7767 96 NFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINAL 131 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rL 131 (200)
.....+.+.|+|+ |.+.. ++.|++.+. +++...+
T Consensus 146 ~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~~~ 181 (300)
T 2qc5_A 146 SYPAFITLGSDNA-LWFTENQNNSIGRITN-TGKLEEY 181 (300)
T ss_dssp CCEEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEEE
T ss_pred CCceeEEECCCCC-EEEEecCCCeEEEECC-CCcEEEe
Confidence 3456667778877 33332 345777766 3444333
No 261
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=46.60 E-value=1.2e+02 Score=25.59 Aligned_cols=37 Identities=3% Similarity=-0.282 Sum_probs=24.2
Q ss_pred CceeeEECcCCCEEEEEE--cCcEEEEECCCCCeE-EEee
Q psy7767 97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSIN-ALTR 133 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~-rLT~ 133 (200)
.......+++|++|..+. ++.+++.|.++.+.. ++..
T Consensus 86 ~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~ 125 (262)
T 3nol_A 86 RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNY 125 (262)
T ss_dssp TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEEC
T ss_pred ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEEC
Confidence 333445677888875554 678999998876653 4443
No 262
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=46.05 E-value=1.6e+02 Score=26.05 Aligned_cols=83 Identities=7% Similarity=0.092 Sum_probs=51.2
Q ss_pred CCceeeEEC---cC---CCEEEEEEc---CcEEEEECCCCCeEEEeeCC---Cc--ceEecccccceeeeeeeCCCcceE
Q psy7767 96 NFLQLVQWS---PV---GHDLIFVKD---NNLYQAYDDFRSINALTRDG---IK--GVLFNGVADWVYEEEVFSSTKTLW 161 (200)
Q Consensus 96 ~~is~~~wS---PD---Gk~IAFV~~---gdLyv~~~~~g~~~rLT~dg---~~--~~~~nG~pdwv~eEEi~~~~~~~~ 161 (200)
..+.++++- |+ ++..||+.+ +.|.|.++.+++..|+.+.. +. .+..+|.+ +. +.....++.
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~-~~----~~~Gi~gIa 226 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKE-YE----FKAGIFGIT 226 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEE-EE----ECCCEEEEE
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEE-eE----eccCceEEE
Confidence 456777776 44 278999975 57999999999999998411 10 11122221 00 012456789
Q ss_pred EccC----CCEEEEEEEcCCcceEEEEE
Q psy7767 162 FSPD----GSILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 162 WSPD----Gk~Laf~r~D~s~v~~~~i~ 185 (200)
.||| ++.|.|.... ...+|.++
T Consensus 227 Lsp~~~~~~~~LYf~pls--s~~ly~V~ 252 (381)
T 3q6k_A 227 LGDRDSEGNRPAYYLAGS--AIKVYSVN 252 (381)
T ss_dssp ECCCCTTSCCEEEEEESS--CSEEEEEE
T ss_pred ecCCcCCCCeEEEEEECC--CCcEEEEE
Confidence 9999 8888776433 23556555
No 263
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=45.54 E-value=99 Score=23.60 Aligned_cols=34 Identities=12% Similarity=0.006 Sum_probs=19.4
Q ss_pred CCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEE
Q psy7767 96 NFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINAL 131 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rL 131 (200)
.....++++|+|+.. +.. ++.|+..+.+ ++...+
T Consensus 104 ~~~~~i~~~~~g~l~-v~~~~~~~i~~~~~~-g~~~~~ 139 (300)
T 2qc5_A 104 SGPYGITEGLNGDIW-FTQLNGDRIGKLTAD-GTIYEY 139 (300)
T ss_dssp CCEEEEEECSTTCEE-EEETTTTEEEEECTT-SCEEEE
T ss_pred CCCccceECCCCCEE-EEccCCCeEEEECCC-CCEEEc
Confidence 445677788887632 222 3467777665 444433
No 264
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=44.37 E-value=88 Score=27.73 Aligned_cols=36 Identities=8% Similarity=0.195 Sum_probs=22.4
Q ss_pred CceeeEECcCCCEEEEEEcC-cEEEEECCCCCeEEEe
Q psy7767 97 FLQLVQWSPVGHDLIFVKDN-NLYQAYDDFRSINALT 132 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~g-dLyv~~~~~g~~~rLT 132 (200)
....++|.|||+.++=-+.+ .|++.+..+|....+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~ 64 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVF 64 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEe
Confidence 45688999999743333333 5888765555555444
No 265
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=40.44 E-value=1.2e+02 Score=25.14 Aligned_cols=29 Identities=3% Similarity=-0.049 Sum_probs=14.6
Q ss_pred ceeeEECcCCCEEEEEE--cCcEEEEECCCC
Q psy7767 98 LQLVQWSPVGHDLIFVK--DNNLYQAYDDFR 126 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~--~gdLyv~~~~~g 126 (200)
...+.|.|.++.|.++- ++.|+..+.+++
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~ 67 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT 67 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSS
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCC
Confidence 34556666666554442 234555555443
No 266
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=40.44 E-value=1.2e+02 Score=25.56 Aligned_cols=17 Identities=0% Similarity=0.104 Sum_probs=11.1
Q ss_pred CCcceEEccCCCEEEEE
Q psy7767 156 STKTLWFSPDGSILAYM 172 (200)
Q Consensus 156 ~~~~~~WSPDGk~Laf~ 172 (200)
...++.|+|+...|...
T Consensus 198 np~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 198 NPQGIDWHRASGVMVAT 214 (354)
T ss_dssp CCCEEEECTTTCCEEEE
T ss_pred CcceEEEeCCCCCEEEE
Confidence 56789999944445433
No 267
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=40.35 E-value=1.2e+02 Score=23.09 Aligned_cols=36 Identities=17% Similarity=-0.056 Sum_probs=21.5
Q ss_pred CCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEe
Q psy7767 96 NFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALT 132 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT 132 (200)
..+..+.++|||+..+-.. ++.|++.+.+ +....+.
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~ 51 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYP 51 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEec
Confidence 4567788888887332222 3468877766 5544443
No 268
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=40.19 E-value=1.1e+02 Score=25.49 Aligned_cols=31 Identities=6% Similarity=-0.093 Sum_probs=23.0
Q ss_pred EECcCCCEEEEEE-cCcEEEEECCCCCeEEEe
Q psy7767 102 QWSPVGHDLIFVK-DNNLYQAYDDFRSINALT 132 (200)
Q Consensus 102 ~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT 132 (200)
.+++||+.|+... ++.|.+.++.+++..+..
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~ 169 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRIL 169 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEE
Confidence 5667999988875 568999998877655433
No 269
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=40.13 E-value=1.4e+02 Score=23.98 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=23.1
Q ss_pred CceeeEECcCCCEEEEEEc--CcEEEEECCCCCeEEEe
Q psy7767 97 FLQLVQWSPVGHDLIFVKD--NNLYQAYDDFRSINALT 132 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~~--gdLyv~~~~~g~~~rLT 132 (200)
.+..+.++|||+.++-..+ +.|+..+.++....++.
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~ 115 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTE 115 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEE
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEe
Confidence 4677889999998766654 35776665444333443
No 270
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=36.35 E-value=1.6e+02 Score=24.76 Aligned_cols=24 Identities=13% Similarity=-0.074 Sum_probs=15.8
Q ss_pred CceeeEECcCCCEEEEEE--cCcEEEEE
Q psy7767 97 FLQLVQWSPVGHDLIFVK--DNNLYQAY 122 (200)
Q Consensus 97 ~is~~~wSPDGk~IAFV~--~gdLyv~~ 122 (200)
....++|.|||+ .||. .+.|++.+
T Consensus 30 ~P~~ia~~pdG~--l~V~e~~g~I~~~d 55 (354)
T 3a9g_A 30 VPWSIAPLGGGR--YLVTERPGRLVLIS 55 (354)
T ss_dssp CEEEEEEEETTE--EEEEETTTEEEEEC
T ss_pred CCeEEEEcCCCe--EEEEeCCCEEEEEe
Confidence 456778999987 3333 45677765
No 271
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=35.93 E-value=1.4e+02 Score=27.61 Aligned_cols=57 Identities=11% Similarity=0.003 Sum_probs=33.6
Q ss_pred ceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 98 LQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
...+++.|.+..|.|+- .+.|+..++++.....+..+. +....++..+|++++|.++
T Consensus 129 P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~------------------~~~P~Glald~~~~~LY~a 188 (619)
T 3s94_A 129 PRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE------------------IYWPNGLTLDYEEQKLYWA 188 (619)
T ss_dssp CCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS------------------CSSEEEEEEETTTTEEEEE
T ss_pred CceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCC------------------CCCCcEEEEEccCCEEEEE
Confidence 34566777766665554 235666666655444443221 1245678888888877654
No 272
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=35.73 E-value=1.2e+02 Score=25.60 Aligned_cols=60 Identities=13% Similarity=0.195 Sum_probs=38.0
Q ss_pred cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeee----eCCCcceEEccCCCEEEEEEEcCCcceEEEEE
Q psy7767 115 DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEV----FSSTKTLWFSPDGSILAYMKFNDARVHNMSYI 185 (200)
Q Consensus 115 ~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi----~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~ 185 (200)
++++|+.+..++...++..++... +.++++ +++..++.+.|||. | |+..|...-.++.+.
T Consensus 288 ~g~l~v~~~~~~~v~~~~~~~~~~---------~~~~~~~~~~~~rp~~v~~~pdG~-l-yv~td~~~g~I~ri~ 351 (353)
T 2g8s_A 288 QQKLFIGALKDKDVIVMSVNGDKV---------TEDGRILTDRGQRIRDVRTGPDGY-L-YVLTDESSGELLKVS 351 (353)
T ss_dssp TTEEEEEETTTTEEEEEEEETTEE---------EEEEEESGGGCCCEEEEEECTTSC-E-EEEECSTTEEEEEEE
T ss_pred CCcEEEEEccCCEEEEEEeCCCeE---------eeeEEcccCCCCceeEEEECCCCc-E-EEEEeCCCCEEEEEe
Confidence 478999988877777777654210 112222 24678899999997 4 555555445666653
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=35.67 E-value=84 Score=27.01 Aligned_cols=46 Identities=11% Similarity=0.039 Sum_probs=30.1
Q ss_pred CEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767 108 HDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM 172 (200)
Q Consensus 108 k~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~ 172 (200)
-.|.|..+++|...+++++....+.... ....++.|+|++..|.++
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~~~-------------------~~~~~l~~d~~~~~lyws 129 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIPNL-------------------RNVVALDTEVASNRIYWS 129 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEECSC-------------------SCEEEEEEETTTTEEEEE
T ss_pred ceeEEeccceeEEEccCCcceeEecccc-------------------CcceEEeeeeccCceEEE
Confidence 4677777889999998877665555422 133456777766666554
No 274
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=30.41 E-value=53 Score=22.60 Aligned_cols=27 Identities=4% Similarity=0.079 Sum_probs=24.0
Q ss_pred CCCceeeEECcCCCEEEEEEcCcEEEE
Q psy7767 95 SNFLQLVQWSPVGHDLIFVKDNNLYQA 121 (200)
Q Consensus 95 ~~~is~~~wSPDGk~IAFV~~gdLyv~ 121 (200)
.+.+.-|.|.|....|+||.+|.+++.
T Consensus 45 ~gg~~~PH~hprA~ei~~V~~G~~~v~ 71 (79)
T 1dgw_X 45 EGALFVPHYNSRATVILVANEGRAEVE 71 (79)
T ss_dssp TTCEEEEEEESSCEEEEEEEESCEEEE
T ss_pred CCcCcCCccCCCCcEEEEEEeceEEEE
Confidence 467899999999999999999988875
No 275
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=30.13 E-value=2.3e+02 Score=25.94 Aligned_cols=71 Identities=20% Similarity=0.190 Sum_probs=44.8
Q ss_pred eeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCc
Q psy7767 99 QLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDAR 178 (200)
Q Consensus 99 s~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~ 178 (200)
+....+-+|..|.+..++.|-..++..+..-++-..... + .|+....+.-||+|+.||.+ .+..
T Consensus 24 R~~~~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~-i-------------~f~~i~qlvlSpsG~lLAl~--g~~~ 87 (452)
T 3pbp_A 24 RYIFSSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRH-L-------------VLDDTFHVISSTSGDLLCLF--NDNE 87 (452)
T ss_dssp EEEEEETTTTEEEEEETTEEEEEETTTCSSCEEEECTTT-C-------------CCCTTCEEEECTTSSEEEEE--CSSE
T ss_pred cEEEEEcCCCEEEEEECCEEEEEECCCCCcceEEecCcc-c-------------ccCceeEEEECCCCCEEEEe--cCCe
Confidence 344567789999888888888888764433333221100 0 02234458899999999976 3345
Q ss_pred ceEEEEE
Q psy7767 179 VHNMSYI 185 (200)
Q Consensus 179 v~~~~i~ 185 (200)
+.+..+|
T Consensus 88 V~Vv~LP 94 (452)
T 3pbp_A 88 IFVMEVP 94 (452)
T ss_dssp EEEEECC
T ss_pred EEEEEec
Confidence 6666666
No 276
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=30.08 E-value=1.7e+02 Score=23.96 Aligned_cols=29 Identities=14% Similarity=0.387 Sum_probs=22.8
Q ss_pred CCceeeEECcCCCEEEEEEcCcEEEEECC
Q psy7767 96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDD 124 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~~gdLyv~~~~ 124 (200)
..+..+.++|+|+.++...++.+|...-.
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~G~~~~S~d~ 191 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSRGSFYSTWEP 191 (327)
T ss_dssp CCEEEEEECTTSCEEEEETTSSEEEEECT
T ss_pred cceEEEEEcCCCcEEEEECCCcEEEEeCC
Confidence 45678889999998887778889887533
No 277
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=27.51 E-value=1.2e+02 Score=28.41 Aligned_cols=34 Identities=6% Similarity=0.030 Sum_probs=22.7
Q ss_pred eeeEECcCCCEEEEEEc--CcEEEEECCCCCeEEEe
Q psy7767 99 QLVQWSPVGHDLIFVKD--NNLYQAYDDFRSINALT 132 (200)
Q Consensus 99 s~~~wSPDGk~IAFV~~--gdLyv~~~~~g~~~rLT 132 (200)
..++|+|+++.|.++-. +.|++.+++++..+.+.
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~ 578 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 578 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEEC
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEE
Confidence 46789998888766643 36888777655444444
No 278
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=27.05 E-value=2e+02 Score=24.14 Aligned_cols=17 Identities=12% Similarity=0.085 Sum_probs=11.0
Q ss_pred CCcceEEccCCCEEEEE
Q psy7767 156 STKTLWFSPDGSILAYM 172 (200)
Q Consensus 156 ~~~~~~WSPDGk~Laf~ 172 (200)
...++.|.|+...|...
T Consensus 198 np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 198 NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp EEEEEEEETTTTEEEEE
T ss_pred CccceEEECCCCCEEEE
Confidence 45788999944456443
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=26.71 E-value=1.8e+02 Score=27.95 Aligned_cols=35 Identities=6% Similarity=-0.114 Sum_probs=20.3
Q ss_pred ceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEe
Q psy7767 98 LQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALT 132 (200)
Q Consensus 98 is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT 132 (200)
...+++.+.|+.|.++- .+.|++.+++++..+.|.
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~ 509 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF 509 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEE
Confidence 34566666676665553 245777766655544443
No 280
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=26.02 E-value=85 Score=27.45 Aligned_cols=15 Identities=20% Similarity=0.271 Sum_probs=12.0
Q ss_pred CcceEEccCCCEEEE
Q psy7767 157 TKTLWFSPDGSILAY 171 (200)
Q Consensus 157 ~~~~~WSPDGk~Laf 171 (200)
..++.+.|||+.|+-
T Consensus 187 ~nGIv~~pdg~~Liv 201 (334)
T 2p9w_A 187 YSGITFDPHSNKLIA 201 (334)
T ss_dssp CSEEEEETTTTEEEE
T ss_pred cceEEEeCCCCEEEE
Confidence 568899999987753
No 281
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=24.06 E-value=2.2e+02 Score=25.12 Aligned_cols=12 Identities=33% Similarity=0.744 Sum_probs=9.5
Q ss_pred CCcceEEccCCC
Q psy7767 156 STKTLWFSPDGS 167 (200)
Q Consensus 156 ~~~~~~WSPDGk 167 (200)
...++.|.|+|+
T Consensus 229 Np~gla~dp~G~ 240 (454)
T 1cru_A 229 NPQGLAFTPNGK 240 (454)
T ss_dssp EEEEEEECTTSC
T ss_pred CcceEEECCCCC
Confidence 456789999986
No 282
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=23.81 E-value=1.6e+02 Score=24.67 Aligned_cols=29 Identities=14% Similarity=0.198 Sum_probs=22.6
Q ss_pred CCceeeEECcCCCEEEEEEcCcEEEEECCC
Q psy7767 96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDF 125 (200)
Q Consensus 96 ~~is~~~wSPDGk~IAFV~~gdLyv~~~~~ 125 (200)
..+.+++++|||..-|- .+++||..+..+
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t 69 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPT 69 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCC
Confidence 35689999999996555 888999886544
No 283
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=22.95 E-value=3.4e+02 Score=22.80 Aligned_cols=33 Identities=9% Similarity=-0.034 Sum_probs=21.9
Q ss_pred eEECcCCCEEEEEE--cCcEEEEECCCCCeE-EEee
Q psy7767 101 VQWSPVGHDLIFVK--DNNLYQAYDDFRSIN-ALTR 133 (200)
Q Consensus 101 ~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~-rLT~ 133 (200)
...+++|++|.-+. ++.+++.|.++.+.. ++..
T Consensus 99 eGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 99 EGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeC
Confidence 34667888875554 578999998876653 4443
No 284
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=20.68 E-value=3.5e+02 Score=22.15 Aligned_cols=33 Identities=6% Similarity=-0.136 Sum_probs=21.0
Q ss_pred eeEECcCCCEEEEEE--cCcEEEEECCCCCeE-EEe
Q psy7767 100 LVQWSPVGHDLIFVK--DNNLYQAYDDFRSIN-ALT 132 (200)
Q Consensus 100 ~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~-rLT 132 (200)
....+++|++|.-+. ++.+++.|.++.+.. ++.
T Consensus 67 geGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~ 102 (243)
T 3mbr_X 67 GAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFR 102 (243)
T ss_dssp EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred eeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEe
Confidence 344566777764443 578999998776543 444
Done!