Query psy7769
Match_columns 355
No_of_seqs 320 out of 2141
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 18:22:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7769.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7769hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fzv_A Putative methyltransfer 100.0 3.2E-53 1.1E-57 417.2 18.7 238 116-354 98-358 (359)
2 2b9e_A NOL1/NOP2/SUN domain fa 100.0 4.4E-43 1.5E-47 338.8 16.0 259 72-354 7-301 (309)
3 3m4x_A NOL1/NOP2/SUN family pr 100.0 5.6E-42 1.9E-46 346.8 16.2 218 114-354 63-303 (456)
4 3m6w_A RRNA methylase; rRNA me 100.0 1.8E-41 6.1E-46 343.7 17.6 247 75-354 30-300 (464)
5 1ixk_A Methyltransferase; open 100.0 2.8E-40 9.5E-45 319.1 19.5 252 73-354 41-315 (315)
6 2frx_A Hypothetical protein YE 100.0 8.1E-40 2.8E-44 333.1 19.8 250 74-354 36-311 (479)
7 3ajd_A Putative methyltransfer 100.0 7.5E-38 2.6E-42 295.8 18.8 246 74-354 8-274 (274)
8 2yxl_A PH0851 protein, 450AA l 100.0 4.3E-38 1.5E-42 317.6 16.3 214 115-355 215-450 (450)
9 1sqg_A SUN protein, FMU protei 100.0 1.6E-37 5.6E-42 311.3 20.1 237 85-354 143-429 (429)
10 3id6_C Fibrillarin-like rRNA/T 99.5 3.2E-14 1.1E-18 131.8 10.6 123 163-298 73-206 (232)
11 4dmg_A Putative uncharacterize 99.5 7.7E-14 2.6E-18 138.5 9.9 131 148-297 198-346 (393)
12 1wxx_A TT1595, hypothetical pr 99.4 7.9E-13 2.7E-17 130.1 7.6 138 149-310 196-354 (382)
13 3njr_A Precorrin-6Y methylase; 99.3 1.7E-11 5.7E-16 110.2 14.1 121 151-298 40-170 (204)
14 3tfw_A Putative O-methyltransf 99.3 2.7E-12 9.3E-17 118.6 9.1 123 151-283 48-174 (248)
15 3c0k_A UPF0064 protein YCCW; P 99.3 2.6E-12 8.9E-17 126.9 9.1 132 148-297 205-359 (396)
16 2as0_A Hypothetical protein PH 99.3 6E-12 2E-16 124.2 10.4 140 150-310 203-364 (396)
17 2dul_A N(2),N(2)-dimethylguano 99.3 2.5E-13 8.5E-18 134.2 0.0 174 151-354 32-233 (378)
18 3duw_A OMT, O-methyltransferas 99.3 6.8E-12 2.3E-16 112.9 8.2 122 151-283 43-171 (223)
19 3e05_A Precorrin-6Y C5,15-meth 99.3 2.3E-11 7.8E-16 108.1 11.4 135 150-311 24-167 (204)
20 3lpm_A Putative methyltransfer 99.2 8.9E-11 3E-15 108.7 11.7 133 155-297 37-190 (259)
21 3v97_A Ribosomal RNA large sub 99.2 2.8E-11 9.4E-16 128.3 9.0 129 148-292 524-670 (703)
22 4df3_A Fibrillarin-like rRNA/T 99.2 6.2E-11 2.1E-15 109.8 10.2 114 155-279 60-182 (233)
23 2frn_A Hypothetical protein PH 99.2 6E-11 2.1E-15 111.7 9.3 114 164-308 123-253 (278)
24 3mti_A RRNA methylase; SAM-dep 99.2 4.3E-11 1.5E-15 104.4 7.3 112 163-285 19-141 (185)
25 3u81_A Catechol O-methyltransf 99.2 7.1E-11 2.4E-15 106.6 8.8 139 150-297 42-185 (221)
26 1i1n_A Protein-L-isoaspartate 99.1 6.2E-11 2.1E-15 106.8 7.4 130 148-289 56-192 (226)
27 3r3h_A O-methyltransferase, SA 99.1 1.6E-10 5.5E-15 106.7 10.2 123 150-282 44-173 (242)
28 3hm2_A Precorrin-6Y C5,15-meth 99.1 6.4E-10 2.2E-14 95.6 13.2 119 155-298 14-143 (178)
29 2b78_A Hypothetical protein SM 99.1 1.6E-10 5.5E-15 114.0 9.5 117 151-284 199-336 (385)
30 2igt_A SAM dependent methyltra 99.1 1.2E-10 4.1E-15 112.8 8.4 141 151-307 137-299 (332)
31 2gpy_A O-methyltransferase; st 99.1 1.8E-10 6.2E-15 104.4 8.9 125 149-283 37-164 (233)
32 3tma_A Methyltransferase; thum 99.1 3E-10 1E-14 110.2 10.7 131 156-296 193-328 (354)
33 3dou_A Ribosomal RNA large sub 99.1 3.9E-10 1.3E-14 100.5 9.3 109 164-298 23-155 (191)
34 3a27_A TYW2, uncharacterized p 99.0 3.2E-10 1.1E-14 106.4 8.2 132 161-308 114-247 (272)
35 1yb2_A Hypothetical protein TA 99.0 3.4E-10 1.2E-14 105.8 7.7 119 148-282 92-214 (275)
36 1xxl_A YCGJ protein; structura 99.0 4.8E-10 1.6E-14 102.2 7.8 121 150-282 5-127 (239)
37 2b3t_A Protein methyltransfera 99.0 9.8E-10 3.4E-14 102.6 10.0 137 153-297 94-252 (276)
38 1nt2_A Fibrillarin-like PRE-rR 99.0 7.8E-10 2.7E-14 99.9 8.6 117 162-291 53-176 (210)
39 3axs_A Probable N(2),N(2)-dime 99.0 4E-11 1.4E-15 119.0 0.1 156 165-354 51-227 (392)
40 3dh0_A SAM dependent methyltra 99.0 3.3E-09 1.1E-13 94.4 12.4 131 157-297 28-170 (219)
41 3k6r_A Putative transferase PH 99.0 1.1E-09 3.9E-14 103.8 9.6 116 164-310 123-255 (278)
42 4gek_A TRNA (CMO5U34)-methyltr 99.0 9.1E-10 3.1E-14 103.0 8.6 104 164-282 68-181 (261)
43 3evz_A Methyltransferase; NYSG 99.0 1.3E-09 4.5E-14 98.1 9.1 136 162-311 51-205 (230)
44 3eey_A Putative rRNA methylase 99.0 2.1E-09 7.1E-14 94.5 10.0 126 162-297 18-159 (197)
45 3fpf_A Mtnas, putative unchara 99.0 1.2E-09 4.2E-14 104.5 9.0 100 160-279 116-222 (298)
46 3dr5_A Putative O-methyltransf 98.9 2.2E-09 7.5E-14 97.8 9.3 109 163-282 53-166 (221)
47 2fca_A TRNA (guanine-N(7)-)-me 98.9 1.5E-09 5E-14 97.9 7.8 109 165-279 37-153 (213)
48 3jwh_A HEN1; methyltransferase 98.9 7.9E-09 2.7E-13 92.3 12.5 115 157-281 20-143 (217)
49 3kkz_A Uncharacterized protein 98.9 2.5E-09 8.4E-14 98.7 9.4 117 164-292 44-163 (267)
50 3g89_A Ribosomal RNA small sub 98.9 5.2E-10 1.8E-14 103.8 4.7 112 164-286 78-191 (249)
51 3c3y_A Pfomt, O-methyltransfer 98.9 3.7E-09 1.3E-13 96.9 10.3 124 151-283 55-185 (237)
52 3mq2_A 16S rRNA methyltransfer 98.9 5.9E-09 2E-13 93.1 11.3 117 158-279 19-140 (218)
53 3ntv_A MW1564 protein; rossman 98.9 1.8E-09 6.1E-14 98.4 7.9 120 151-282 56-179 (232)
54 1vl5_A Unknown conserved prote 98.9 2E-09 6.8E-14 98.9 8.2 121 149-281 20-142 (260)
55 3dxy_A TRNA (guanine-N(7)-)-me 98.9 7.6E-10 2.6E-14 100.7 5.2 121 165-296 33-161 (218)
56 3tr6_A O-methyltransferase; ce 98.9 2.3E-09 7.7E-14 96.2 8.3 124 151-282 49-177 (225)
57 3c3p_A Methyltransferase; NP_9 98.9 1E-09 3.6E-14 97.8 5.8 119 152-283 42-164 (210)
58 3f4k_A Putative methyltransfer 98.9 2.3E-09 7.7E-14 97.9 8.1 113 163-287 43-158 (257)
59 3vc1_A Geranyl diphosphate 2-C 98.9 5.5E-09 1.9E-13 99.1 10.8 116 157-284 107-226 (312)
60 2qm3_A Predicted methyltransfe 98.9 9.7E-09 3.3E-13 100.5 12.5 131 150-296 155-296 (373)
61 1dus_A MJ0882; hypothetical pr 98.9 6.3E-09 2.2E-13 89.9 9.9 124 153-297 39-172 (194)
62 1l3i_A Precorrin-6Y methyltran 98.9 4.6E-09 1.6E-13 90.6 8.9 132 151-311 18-159 (192)
63 3mb5_A SAM-dependent methyltra 98.9 2.9E-09 9.9E-14 97.5 8.0 107 153-281 80-196 (255)
64 1xdz_A Methyltransferase GIDB; 98.9 1.1E-09 3.9E-14 100.0 5.2 112 163-285 67-180 (240)
65 1yzh_A TRNA (guanine-N(7)-)-me 98.9 4.5E-09 1.5E-13 94.1 8.7 110 165-280 40-157 (214)
66 1nkv_A Hypothetical protein YJ 98.9 4.4E-09 1.5E-13 95.9 8.6 115 157-283 27-144 (256)
67 3hem_A Cyclopropane-fatty-acyl 98.9 6.5E-09 2.2E-13 97.9 9.9 116 157-283 63-187 (302)
68 3bt7_A TRNA (uracil-5-)-methyl 98.9 5.3E-09 1.8E-13 102.3 9.4 86 167-282 214-329 (369)
69 3lbf_A Protein-L-isoaspartate 98.9 3E-09 1E-13 94.4 6.7 109 148-281 59-176 (210)
70 3jwg_A HEN1, methyltransferase 98.9 2E-08 6.7E-13 89.7 12.1 115 157-281 20-143 (219)
71 2vdv_E TRNA (guanine-N(7)-)-me 98.8 2.3E-09 7.8E-14 98.4 5.8 125 164-296 47-184 (246)
72 1nv8_A HEMK protein; class I a 98.8 3.1E-09 1E-13 100.6 6.7 120 164-292 121-259 (284)
73 3dtn_A Putative methyltransfer 98.8 1.1E-08 3.7E-13 92.2 10.0 107 164-283 42-152 (234)
74 3p9n_A Possible methyltransfer 98.8 9.7E-09 3.3E-13 90.0 9.2 108 165-283 43-157 (189)
75 1inl_A Spermidine synthase; be 98.8 3.6E-09 1.2E-13 100.7 6.7 116 166-296 90-224 (296)
76 3ujc_A Phosphoethanolamine N-m 98.8 9.7E-09 3.3E-13 93.6 9.2 112 159-283 48-163 (266)
77 2hnk_A SAM-dependent O-methylt 98.8 1.3E-08 4.6E-13 92.6 10.1 125 152-283 46-185 (239)
78 1sui_A Caffeoyl-COA O-methyltr 98.8 8.6E-09 2.9E-13 95.3 8.7 120 151-280 64-191 (247)
79 1o54_A SAM-dependent O-methylt 98.8 9.2E-09 3.1E-13 95.9 8.8 105 156-282 102-216 (277)
80 3orh_A Guanidinoacetate N-meth 98.8 3.6E-09 1.2E-13 96.9 5.5 107 164-279 58-170 (236)
81 3kr9_A SAM-dependent methyltra 98.8 2.2E-08 7.7E-13 92.1 10.6 117 164-309 13-140 (225)
82 3cbg_A O-methyltransferase; cy 98.8 1.8E-08 6.1E-13 91.8 9.9 121 153-283 59-186 (232)
83 3p2e_A 16S rRNA methylase; met 98.8 9.8E-09 3.4E-13 93.7 7.7 109 164-279 22-139 (225)
84 3grz_A L11 mtase, ribosomal pr 98.8 1.5E-08 5E-13 89.7 8.4 119 155-297 47-174 (205)
85 2bm8_A Cephalosporin hydroxyla 98.8 6.3E-09 2.2E-13 95.6 5.9 128 157-298 72-207 (236)
86 2nyu_A Putative ribosomal RNA 98.8 6.3E-08 2.1E-12 84.6 12.0 110 164-297 20-160 (196)
87 4dzr_A Protein-(glutamine-N5) 98.8 6.2E-09 2.1E-13 91.6 5.6 124 165-296 29-178 (215)
88 2yx1_A Hypothetical protein MJ 98.8 1E-08 3.4E-13 99.2 7.4 91 164-283 193-295 (336)
89 3mgg_A Methyltransferase; NYSG 98.8 1.5E-08 5.1E-13 93.6 8.3 107 163-279 34-142 (276)
90 3lec_A NADB-rossmann superfami 98.8 2.6E-08 8.7E-13 92.0 9.7 118 164-310 19-147 (230)
91 3ofk_A Nodulation protein S; N 98.8 1E-08 3.5E-13 91.2 6.8 129 151-297 36-178 (216)
92 2plw_A Ribosomal RNA methyltra 98.8 4.3E-08 1.5E-12 86.2 10.7 38 164-201 20-59 (201)
93 2esr_A Methyltransferase; stru 98.8 2.6E-08 8.7E-13 86.0 9.1 102 164-284 29-143 (177)
94 3bus_A REBM, methyltransferase 98.8 9.4E-09 3.2E-13 94.7 6.8 115 157-282 52-169 (273)
95 2p41_A Type II methyltransfera 98.7 1.4E-08 4.9E-13 97.2 8.2 96 164-279 80-191 (305)
96 1pjz_A Thiopurine S-methyltran 98.7 2.3E-08 7.8E-13 89.3 9.0 115 162-283 18-144 (203)
97 3dlc_A Putative S-adenosyl-L-m 98.7 1.6E-08 5.5E-13 89.2 7.5 113 158-282 36-151 (219)
98 2p35_A Trans-aconitate 2-methy 98.7 2.4E-08 8.3E-13 90.9 8.9 109 157-281 24-134 (259)
99 2o57_A Putative sarcosine dime 98.7 2E-08 6.9E-13 93.9 8.5 109 163-282 79-190 (297)
100 4dcm_A Ribosomal RNA large sub 98.7 2.4E-08 8.3E-13 98.2 9.4 116 151-284 207-339 (375)
101 2pwy_A TRNA (adenine-N(1)-)-me 98.7 2.7E-08 9.2E-13 90.7 9.0 112 156-282 86-201 (258)
102 2fk8_A Methoxy mycolic acid sy 98.7 3.6E-08 1.2E-12 93.3 10.1 113 158-284 82-199 (318)
103 1wy7_A Hypothetical protein PH 98.7 4.2E-08 1.4E-12 86.7 9.9 115 163-308 46-171 (207)
104 1i9g_A Hypothetical protein RV 98.7 1.8E-08 6.3E-13 93.3 7.9 114 154-282 87-206 (280)
105 1fbn_A MJ fibrillarin homologu 98.7 8.1E-08 2.8E-12 87.0 11.9 102 162-278 70-177 (230)
106 2ift_A Putative methylase HI07 98.7 1.5E-08 5.1E-13 90.4 6.9 108 166-283 53-167 (201)
107 2fpo_A Methylase YHHF; structu 98.7 1.5E-08 5.3E-13 90.3 6.8 95 166-284 54-165 (202)
108 2avd_A Catechol-O-methyltransf 98.7 3E-08 1E-12 89.1 8.7 120 155-282 58-182 (229)
109 2h1r_A Dimethyladenosine trans 98.7 4.4E-09 1.5E-13 100.2 3.2 128 148-282 24-162 (299)
110 3ckk_A TRNA (guanine-N(7)-)-me 98.7 1.6E-08 5.5E-13 92.9 6.9 127 164-298 44-181 (235)
111 2xvm_A Tellurite resistance pr 98.7 3.5E-08 1.2E-12 86.0 8.7 114 153-279 19-136 (199)
112 3gu3_A Methyltransferase; alph 98.7 1.4E-08 4.9E-13 94.9 6.6 118 152-281 8-128 (284)
113 1dl5_A Protein-L-isoaspartate 98.7 4.1E-08 1.4E-12 93.8 9.7 109 151-282 60-178 (317)
114 1kpg_A CFA synthase;, cyclopro 98.7 4.4E-08 1.5E-12 91.1 9.6 110 159-282 57-171 (287)
115 2yxd_A Probable cobalt-precorr 98.7 8.3E-08 2.8E-12 82.1 10.2 133 153-311 22-156 (183)
116 2ozv_A Hypothetical protein AT 98.7 4.6E-08 1.6E-12 90.9 9.2 124 155-279 25-170 (260)
117 2pxx_A Uncharacterized protein 98.7 3.8E-08 1.3E-12 86.6 8.1 121 164-297 40-172 (215)
118 1jsx_A Glucose-inhibited divis 98.7 2E-08 7E-13 88.6 6.1 101 166-281 65-167 (207)
119 1vbf_A 231AA long hypothetical 98.7 3.3E-08 1.1E-12 88.9 7.5 107 149-282 53-168 (231)
120 3gnl_A Uncharacterized protein 98.7 6.4E-08 2.2E-12 90.1 9.6 111 163-298 18-139 (244)
121 3g5l_A Putative S-adenosylmeth 98.7 5.1E-08 1.7E-12 88.9 8.7 108 160-281 38-147 (253)
122 1jg1_A PIMT;, protein-L-isoasp 98.7 3.1E-08 1.1E-12 89.9 7.2 108 150-281 75-191 (235)
123 3ou2_A SAM-dependent methyltra 98.7 7.3E-08 2.5E-12 85.1 9.5 104 159-282 39-149 (218)
124 1g8a_A Fibrillarin-like PRE-rR 98.7 9.3E-08 3.2E-12 86.0 10.1 103 164-280 71-179 (227)
125 3bkw_A MLL3908 protein, S-aden 98.6 7.9E-08 2.7E-12 86.5 9.5 110 157-280 34-145 (243)
126 3g5t_A Trans-aconitate 3-methy 98.6 3.9E-08 1.3E-12 92.4 7.7 115 164-282 34-152 (299)
127 2yxe_A Protein-L-isoaspartate 98.6 3.6E-08 1.2E-12 87.7 6.8 105 154-281 65-179 (215)
128 1r18_A Protein-L-isoaspartate( 98.6 1.8E-08 6.2E-13 90.9 4.9 108 151-281 67-196 (227)
129 2yqz_A Hypothetical protein TT 98.6 7.7E-08 2.6E-12 87.6 9.0 103 163-278 36-140 (263)
130 3sm3_A SAM-dependent methyltra 98.6 8.5E-08 2.9E-12 85.6 9.0 104 164-283 28-145 (235)
131 1xtp_A LMAJ004091AAA; SGPP, st 98.6 9.1E-08 3.1E-12 86.8 9.2 109 160-281 87-199 (254)
132 3g07_A 7SK snRNA methylphospha 98.6 6.8E-08 2.3E-12 91.0 8.6 44 166-209 46-91 (292)
133 1zx0_A Guanidinoacetate N-meth 98.6 2E-08 7E-13 91.1 4.8 103 164-281 58-172 (236)
134 3gdh_A Trimethylguanosine synt 98.6 5.7E-08 2E-12 88.0 7.7 69 154-228 66-137 (241)
135 3ggd_A SAM-dependent methyltra 98.6 9.7E-08 3.3E-12 86.6 9.2 102 161-282 51-166 (245)
136 1zq9_A Probable dimethyladenos 98.6 2.2E-08 7.6E-13 94.6 5.0 80 148-233 10-92 (285)
137 2fhp_A Methylase, putative; al 98.6 9.8E-08 3.4E-12 82.4 8.5 112 164-284 42-159 (187)
138 3tm4_A TRNA (guanine N2-)-meth 98.6 1.3E-07 4.6E-12 92.5 10.5 122 164-297 215-341 (373)
139 2b25_A Hypothetical protein; s 98.6 9.7E-08 3.3E-12 91.6 9.2 125 155-296 94-230 (336)
140 3e23_A Uncharacterized protein 98.6 2.2E-07 7.6E-12 82.3 10.8 111 163-297 40-170 (211)
141 3ocj_A Putative exported prote 98.6 6.1E-08 2.1E-12 91.5 7.6 114 161-282 113-230 (305)
142 2pjd_A Ribosomal RNA small sub 98.6 6.5E-08 2.2E-12 93.4 7.8 120 152-284 182-308 (343)
143 3hnr_A Probable methyltransfer 98.6 8.4E-08 2.9E-12 85.3 7.9 106 160-282 39-148 (220)
144 3ccf_A Cyclopropane-fatty-acyl 98.6 6.7E-08 2.3E-12 89.7 7.4 102 157-282 48-157 (279)
145 4htf_A S-adenosylmethionine-de 98.6 8.6E-08 2.9E-12 89.2 8.1 105 166-281 68-175 (285)
146 2gb4_A Thiopurine S-methyltran 98.6 7.4E-08 2.5E-12 89.5 7.6 112 163-281 65-193 (252)
147 3thr_A Glycine N-methyltransfe 98.6 4.1E-08 1.4E-12 91.4 5.9 111 157-282 48-178 (293)
148 2yvl_A TRMI protein, hypotheti 98.6 1E-07 3.5E-12 86.3 8.2 110 155-282 80-193 (248)
149 3uwp_A Histone-lysine N-methyl 98.6 2.3E-07 7.7E-12 92.6 11.0 118 158-282 165-291 (438)
150 1ri5_A MRNA capping enzyme; me 98.6 1.6E-07 5.6E-12 87.0 9.3 109 164-282 62-177 (298)
151 2p8j_A S-adenosylmethionine-de 98.6 6.4E-08 2.2E-12 85.2 6.0 111 161-283 18-132 (209)
152 2ex4_A Adrenal gland protein A 98.6 9.8E-08 3.3E-12 86.6 7.4 107 165-282 78-188 (241)
153 4fsd_A Arsenic methyltransfera 98.6 9E-08 3.1E-12 93.8 7.6 115 164-282 81-206 (383)
154 2vdw_A Vaccinia virus capping 98.6 1.5E-07 5.1E-12 89.7 8.9 100 165-281 47-171 (302)
155 3dmg_A Probable ribosomal RNA 98.6 1.6E-07 5.4E-12 92.6 9.3 113 152-284 213-345 (381)
156 2p7i_A Hypothetical protein; p 98.6 1.2E-07 4.2E-12 85.0 7.8 101 164-281 40-143 (250)
157 2pbf_A Protein-L-isoaspartate 98.6 8.7E-08 3E-12 86.0 6.8 100 158-280 70-194 (227)
158 2nxc_A L11 mtase, ribosomal pr 98.6 1.9E-07 6.5E-12 86.4 9.2 117 155-297 107-233 (254)
159 2ipx_A RRNA 2'-O-methyltransfe 98.5 1.4E-07 4.6E-12 85.5 8.0 105 162-280 73-183 (233)
160 3lcc_A Putative methyl chlorid 98.5 2E-07 6.8E-12 84.1 9.1 114 167-297 67-196 (235)
161 3g2m_A PCZA361.24; SAM-depende 98.5 1.1E-07 3.9E-12 89.2 7.7 111 160-283 77-194 (299)
162 3m70_A Tellurite resistance pr 98.5 1.6E-07 5.5E-12 87.4 8.7 103 159-279 113-223 (286)
163 3h2b_A SAM-dependent methyltra 98.5 2.5E-07 8.6E-12 81.3 9.3 109 167-297 42-171 (203)
164 4hg2_A Methyltransferase type 98.5 1.1E-07 3.6E-12 88.9 7.2 96 166-285 39-141 (257)
165 2f8l_A Hypothetical protein LM 98.5 4.6E-08 1.6E-12 94.4 4.9 127 163-297 127-275 (344)
166 3l8d_A Methyltransferase; stru 98.5 2E-07 6.8E-12 83.9 8.8 104 164-282 51-156 (242)
167 1uwv_A 23S rRNA (uracil-5-)-me 98.5 2E-07 6.7E-12 93.2 9.4 63 160-228 280-344 (433)
168 3iv6_A Putative Zn-dependent a 98.5 2E-07 6.8E-12 87.5 8.8 104 157-280 36-149 (261)
169 3bkx_A SAM-dependent methyltra 98.5 3.2E-07 1.1E-11 84.4 10.1 122 155-284 32-164 (275)
170 2kw5_A SLR1183 protein; struct 98.5 1.4E-07 4.7E-12 82.9 7.3 102 164-283 28-135 (202)
171 1ej0_A FTSJ; methyltransferase 98.5 2.1E-07 7E-12 78.6 8.0 109 164-297 20-151 (180)
172 1ws6_A Methyltransferase; stru 98.5 1.3E-07 4.3E-12 80.4 6.7 99 166-286 41-154 (171)
173 1wzn_A SAM-dependent methyltra 98.5 1.9E-07 6.6E-12 84.8 8.3 106 163-280 38-146 (252)
174 1ve3_A Hypothetical protein PH 98.5 1.1E-07 3.8E-12 84.6 6.4 107 164-281 36-144 (227)
175 2jjq_A Uncharacterized RNA met 98.5 1.7E-07 5.7E-12 93.8 8.3 95 157-280 281-387 (425)
176 3cgg_A SAM-dependent methyltra 98.5 1.7E-06 5.8E-11 74.5 13.1 117 164-297 44-164 (195)
177 1u2z_A Histone-lysine N-methyl 98.5 3.9E-07 1.3E-11 91.4 9.7 101 160-278 236-358 (433)
178 2fyt_A Protein arginine N-meth 98.5 1.5E-07 5.1E-12 91.1 6.5 114 160-289 58-183 (340)
179 3d2l_A SAM-dependent methyltra 98.5 2.2E-07 7.5E-12 83.6 6.9 104 164-282 31-140 (243)
180 3i9f_A Putative type 11 methyl 98.5 1.3E-07 4.5E-12 80.8 5.2 100 160-283 11-116 (170)
181 3ege_A Putative methyltransfer 98.4 3.1E-07 1.1E-11 84.6 7.6 110 156-282 24-133 (261)
182 1y8c_A S-adenosylmethionine-de 98.4 2.8E-07 9.5E-12 82.7 6.9 102 166-281 37-144 (246)
183 3q87_B N6 adenine specific DNA 98.4 2.8E-07 9.6E-12 79.9 6.6 120 153-297 8-138 (170)
184 2okc_A Type I restriction enzy 98.4 1.4E-07 4.9E-12 94.3 5.2 141 148-295 153-325 (445)
185 3bxo_A N,N-dimethyltransferase 98.4 4.5E-07 1.5E-11 81.3 7.9 99 165-283 39-145 (239)
186 1o9g_A RRNA methyltransferase; 98.4 1.7E-07 5.7E-12 85.9 4.8 46 164-209 49-98 (250)
187 1m6y_A S-adenosyl-methyltransf 98.4 4.4E-07 1.5E-11 86.8 7.8 64 158-226 18-83 (301)
188 1mjf_A Spermidine synthase; sp 98.4 6.4E-07 2.2E-11 84.3 8.2 114 165-296 74-208 (281)
189 3r0q_C Probable protein argini 98.4 2.6E-07 9E-12 90.5 5.7 117 162-289 59-181 (376)
190 2ih2_A Modification methylase 98.4 1.6E-06 5.6E-11 84.9 11.0 136 148-297 21-183 (421)
191 2y1w_A Histone-arginine methyl 98.4 3.2E-07 1.1E-11 88.9 5.7 114 159-290 43-168 (348)
192 3opn_A Putative hemolysin; str 98.3 3.7E-07 1.3E-11 83.8 5.7 91 166-279 37-137 (232)
193 2oxt_A Nucleoside-2'-O-methylt 98.3 5.8E-07 2E-11 84.3 7.0 106 163-281 71-187 (265)
194 2aot_A HMT, histamine N-methyl 98.3 7.1E-07 2.4E-11 83.6 7.4 102 164-281 50-174 (292)
195 3hp7_A Hemolysin, putative; st 98.3 3.5E-07 1.2E-11 87.2 5.3 37 166-203 85-121 (291)
196 2qe6_A Uncharacterized protein 98.3 1.9E-06 6.5E-11 80.8 10.3 106 166-282 77-199 (274)
197 1qzz_A RDMB, aclacinomycin-10- 98.3 2.1E-06 7.1E-11 83.0 10.7 106 158-280 174-288 (374)
198 3m33_A Uncharacterized protein 98.3 5.7E-07 1.9E-11 81.0 6.2 108 164-297 46-156 (226)
199 2wa2_A Non-structural protein 98.3 7.6E-07 2.6E-11 84.0 7.3 105 164-281 80-195 (276)
200 3pfg_A N-methyltransferase; N, 98.3 6.8E-07 2.3E-11 81.9 6.6 96 165-280 49-152 (263)
201 3dli_A Methyltransferase; PSI- 98.3 7.8E-07 2.7E-11 80.5 6.6 92 164-282 39-143 (240)
202 3q7e_A Protein arginine N-meth 98.3 2.4E-07 8.3E-12 89.8 3.3 111 163-283 63-177 (349)
203 2a14_A Indolethylamine N-methy 98.3 3.3E-07 1.1E-11 84.8 3.9 116 163-280 52-198 (263)
204 1x19_A CRTF-related protein; m 98.3 2.1E-06 7.3E-11 82.8 9.6 113 159-283 183-299 (359)
205 1g6q_1 HnRNP arginine N-methyl 98.3 3.7E-07 1.3E-11 87.7 4.2 116 162-289 34-157 (328)
206 3e8s_A Putative SAM dependent 98.3 1.9E-06 6.5E-11 76.1 8.4 97 160-282 46-155 (227)
207 2pt6_A Spermidine synthase; tr 98.3 2.4E-06 8.2E-11 82.1 9.4 121 165-297 115-246 (321)
208 3cc8_A Putative methyltransfer 98.3 1.2E-06 4E-11 77.7 6.7 100 165-281 31-132 (230)
209 2g72_A Phenylethanolamine N-me 98.3 7.9E-07 2.7E-11 83.0 5.9 44 165-209 70-115 (289)
210 3dp7_A SAM-dependent methyltra 98.3 5.8E-06 2E-10 80.2 12.2 109 165-285 178-293 (363)
211 3bgv_A MRNA CAP guanine-N7 met 98.3 1.6E-06 5.4E-11 81.9 7.9 113 165-282 33-158 (313)
212 1p91_A Ribosomal RNA large sub 98.3 8.5E-07 2.9E-11 81.6 5.9 96 165-282 84-181 (269)
213 2i7c_A Spermidine synthase; tr 98.2 3.9E-06 1.3E-10 79.0 10.3 120 165-297 77-208 (283)
214 3adn_A Spermidine synthase; am 98.2 9.1E-07 3.1E-11 84.2 5.9 106 166-282 83-201 (294)
215 2i62_A Nicotinamide N-methyltr 98.2 5.6E-07 1.9E-11 81.9 4.3 111 163-280 53-199 (265)
216 2o07_A Spermidine synthase; st 98.2 1.7E-06 5.8E-11 82.5 7.7 102 165-282 94-212 (304)
217 2xyq_A Putative 2'-O-methyl tr 98.2 1.2E-06 4E-11 83.5 6.3 108 162-297 59-186 (290)
218 2gs9_A Hypothetical protein TT 98.2 9.2E-07 3.1E-11 78.1 5.2 97 166-282 36-135 (211)
219 1tw3_A COMT, carminomycin 4-O- 98.2 3E-06 1E-10 81.5 9.1 106 159-281 176-290 (360)
220 1iy9_A Spermidine synthase; ro 98.2 6.4E-06 2.2E-10 77.3 11.2 116 166-297 75-205 (275)
221 2r3s_A Uncharacterized protein 98.2 3E-06 1E-10 80.4 8.8 113 160-284 157-276 (335)
222 3htx_A HEN1; HEN1, small RNA m 98.2 2.7E-06 9.1E-11 91.1 9.2 118 158-282 713-837 (950)
223 2ip2_A Probable phenazine-spec 98.2 5.7E-06 2E-10 78.7 10.8 109 162-284 164-277 (334)
224 2avn_A Ubiquinone/menaquinone 98.2 3E-06 1E-10 77.8 8.5 99 166-282 54-155 (260)
225 4hc4_A Protein arginine N-meth 98.2 7.3E-07 2.5E-11 87.9 4.5 115 165-289 82-201 (376)
226 3mcz_A O-methyltransferase; ad 98.2 3.5E-06 1.2E-10 80.8 9.1 112 162-285 174-293 (352)
227 3gwz_A MMCR; methyltransferase 98.2 9.1E-06 3.1E-10 79.0 11.2 114 161-287 197-315 (369)
228 3i53_A O-methyltransferase; CO 98.2 4.3E-06 1.5E-10 79.7 8.6 108 164-284 167-279 (332)
229 3bzb_A Uncharacterized protein 98.1 1.1E-05 3.7E-10 75.6 10.7 44 164-208 77-123 (281)
230 2ar0_A M.ecoki, type I restric 98.1 2.8E-06 9.6E-11 87.4 7.2 141 148-297 151-332 (541)
231 3fzg_A 16S rRNA methylase; met 98.1 1.6E-06 5.4E-11 78.1 4.6 100 165-283 48-157 (200)
232 3tka_A Ribosomal RNA small sub 98.1 8.9E-06 3.1E-10 78.9 10.2 51 158-208 49-101 (347)
233 3b3j_A Histone-arginine methyl 98.1 2.7E-06 9.1E-11 86.3 6.7 116 161-289 153-275 (480)
234 3tqs_A Ribosomal RNA small sub 98.1 3.3E-06 1.1E-10 78.7 6.3 79 148-234 10-91 (255)
235 1xj5_A Spermidine synthase 1; 98.1 5.4E-06 1.9E-10 80.2 8.0 122 164-296 118-250 (334)
236 2b2c_A Spermidine synthase; be 98.1 7.2E-06 2.5E-10 78.7 8.7 108 166-283 108-226 (314)
237 2h00_A Methyltransferase 10 do 98.1 1.3E-05 4.4E-10 73.2 10.0 57 166-226 65-124 (254)
238 3bwc_A Spermidine synthase; SA 98.0 5.8E-06 2E-10 78.6 7.1 113 164-281 93-212 (304)
239 3lst_A CALO1 methyltransferase 98.0 1.3E-05 4.6E-10 77.0 9.3 112 160-284 178-291 (348)
240 1qam_A ERMC' methyltransferase 98.0 4.6E-06 1.6E-10 76.7 5.8 76 150-233 14-91 (244)
241 1ne2_A Hypothetical protein TA 98.0 1.4E-05 4.9E-10 70.1 8.8 102 163-297 48-160 (200)
242 3gru_A Dimethyladenosine trans 98.0 6.8E-06 2.3E-10 78.3 7.0 77 149-233 32-111 (295)
243 2qfm_A Spermine synthase; sper 98.0 1.6E-05 5.4E-10 77.9 9.7 110 166-284 188-319 (364)
244 1uir_A Polyamine aminopropyltr 98.0 5.6E-06 1.9E-10 79.1 6.3 107 165-282 76-198 (314)
245 3gjy_A Spermidine synthase; AP 98.0 9E-06 3.1E-10 78.3 7.5 102 168-282 91-203 (317)
246 3giw_A Protein of unknown func 98.0 1.4E-05 4.9E-10 75.5 8.7 107 168-282 80-203 (277)
247 4a6d_A Hydroxyindole O-methylt 98.0 3.5E-05 1.2E-09 74.5 11.3 114 161-287 174-291 (353)
248 3ldg_A Putative uncharacterize 98.0 2E-05 6.9E-10 77.7 9.7 66 160-229 188-294 (384)
249 3ldu_A Putative methylase; str 98.0 2E-05 6.7E-10 77.7 9.3 67 160-230 189-296 (385)
250 3ll7_A Putative methyltransfer 98.0 7.3E-06 2.5E-10 81.6 6.2 82 151-236 76-175 (410)
251 3fut_A Dimethyladenosine trans 97.9 1.5E-05 5E-10 75.1 7.7 76 148-233 28-106 (271)
252 4e2x_A TCAB9; kijanose, tetron 97.9 5.2E-06 1.8E-10 81.6 4.6 101 159-280 100-209 (416)
253 3uzu_A Ribosomal RNA small sub 97.9 1.6E-05 5.4E-10 75.1 7.3 79 148-234 23-106 (279)
254 1yub_A Ermam, rRNA methyltrans 97.9 2.8E-06 9.5E-11 77.9 1.9 124 148-279 11-145 (245)
255 1qyr_A KSGA, high level kasuga 97.9 1.3E-05 4.5E-10 74.5 6.5 71 155-233 10-82 (252)
256 3reo_A (ISO)eugenol O-methyltr 97.9 4.1E-05 1.4E-09 74.5 10.2 105 164-285 201-306 (368)
257 3p9c_A Caffeic acid O-methyltr 97.9 5.2E-05 1.8E-09 73.7 10.6 104 164-285 199-304 (364)
258 2cmg_A Spermidine synthase; tr 97.8 3.3E-05 1.1E-09 72.1 8.0 110 166-297 72-187 (262)
259 3k0b_A Predicted N6-adenine-sp 97.8 7.7E-05 2.6E-09 73.7 10.6 67 159-229 194-301 (393)
260 1vlm_A SAM-dependent methyltra 97.8 2.2E-05 7.5E-10 70.0 5.6 94 166-282 47-142 (219)
261 2zfu_A Nucleomethylin, cerebra 97.8 5.3E-05 1.8E-09 66.9 8.0 116 157-308 58-175 (215)
262 3lkd_A Type I restriction-modi 97.8 4E-05 1.4E-09 78.8 8.0 145 148-297 199-378 (542)
263 3sso_A Methyltransferase; macr 97.8 6.3E-05 2.2E-09 74.8 8.8 91 166-281 216-326 (419)
264 3evf_A RNA-directed RNA polyme 97.7 5.6E-05 1.9E-09 71.3 7.7 39 163-201 71-109 (277)
265 3ftd_A Dimethyladenosine trans 97.7 2.6E-05 8.8E-10 72.3 4.8 72 153-233 18-91 (249)
266 3eld_A Methyltransferase; flav 97.7 7.9E-05 2.7E-09 70.9 8.1 101 164-281 79-193 (300)
267 1fp1_D Isoliquiritigenin 2'-O- 97.7 7.9E-05 2.7E-09 72.2 7.8 99 164-283 207-310 (372)
268 2r6z_A UPF0341 protein in RSP 97.7 2.5E-05 8.6E-10 72.8 4.0 68 155-228 72-149 (258)
269 1af7_A Chemotaxis receptor met 97.6 7.9E-05 2.7E-09 70.1 7.1 104 166-278 105-251 (274)
270 3v97_A Ribosomal RNA large sub 97.6 0.00017 5.7E-09 76.4 10.3 115 160-280 184-348 (703)
271 3gcz_A Polyprotein; flavivirus 97.6 5.1E-05 1.7E-09 71.7 5.5 39 164-202 88-126 (282)
272 3khk_A Type I restriction-modi 97.6 2E-05 6.7E-10 81.2 2.5 145 148-297 227-416 (544)
273 4auk_A Ribosomal RNA large sub 97.6 0.00012 4.2E-09 71.8 7.8 57 164-231 209-265 (375)
274 2px2_A Genome polyprotein [con 97.5 6.8E-05 2.3E-09 70.0 4.8 35 164-198 71-109 (269)
275 1fp2_A Isoflavone O-methyltran 97.5 0.00017 6E-09 69.2 7.5 104 163-284 185-293 (352)
276 1wg8_A Predicted S-adenosylmet 97.5 0.00014 4.7E-09 68.9 6.5 49 158-209 14-64 (285)
277 2oyr_A UPF0341 protein YHIQ; a 97.4 9.9E-05 3.4E-09 69.0 4.4 73 155-229 75-156 (258)
278 3s1s_A Restriction endonucleas 97.3 0.0011 3.7E-08 71.0 11.3 132 165-297 320-486 (878)
279 1zg3_A Isoflavanone 4'-O-methy 97.2 0.00073 2.5E-08 64.9 8.4 102 164-283 191-297 (358)
280 2ld4_A Anamorsin; methyltransf 97.1 0.00011 3.9E-09 62.9 1.6 83 161-279 7-101 (176)
281 2qy6_A UPF0209 protein YFCK; s 97.1 0.0012 4E-08 61.5 8.5 130 164-308 58-231 (257)
282 3frh_A 16S rRNA methylase; met 97.1 0.00067 2.3E-08 63.1 6.8 104 165-283 104-211 (253)
283 3p8z_A Mtase, non-structural p 97.0 0.001 3.5E-08 61.5 7.0 125 163-303 75-206 (267)
284 3lcv_B Sisomicin-gentamicin re 97.0 0.0005 1.7E-08 64.7 4.4 106 165-283 131-241 (281)
285 3ufb_A Type I restriction-modi 96.9 0.0016 5.5E-08 66.7 7.6 141 148-297 199-382 (530)
286 3lkz_A Non-structural protein 96.7 0.0017 5.9E-08 61.7 5.6 39 163-201 91-129 (321)
287 3cvo_A Methyltransferase-like 96.7 0.0056 1.9E-07 55.1 8.7 118 165-296 29-169 (202)
288 4gqb_A Protein arginine N-meth 96.5 0.0014 4.6E-08 68.7 4.2 116 167-294 358-484 (637)
289 4azs_A Methyltransferase WBDD; 96.3 0.0042 1.4E-07 63.9 6.3 59 165-229 65-125 (569)
290 2zig_A TTHA0409, putative modi 95.9 0.0077 2.6E-07 56.6 5.2 43 165-209 234-278 (297)
291 3r24_A NSP16, 2'-O-methyl tran 95.8 0.011 3.6E-07 56.4 5.7 44 155-200 94-148 (344)
292 1i4w_A Mitochondrial replicati 95.6 0.01 3.5E-07 57.7 5.2 77 148-231 33-118 (353)
293 3ua3_A Protein arginine N-meth 95.4 0.0043 1.5E-07 65.4 1.5 120 168-295 411-552 (745)
294 3o4f_A Spermidine synthase; am 95.2 0.065 2.2E-06 50.8 8.8 123 158-297 76-214 (294)
295 2wk1_A NOVP; transferase, O-me 95.2 0.038 1.3E-06 52.1 7.1 104 166-281 107-246 (282)
296 3b5i_A S-adenosyl-L-methionine 95.1 0.035 1.2E-06 54.3 6.9 43 167-209 53-112 (374)
297 4eez_A Alcohol dehydrogenase 1 94.8 0.052 1.8E-06 51.3 7.1 46 162-207 159-206 (348)
298 2py6_A Methyltransferase FKBM; 94.7 0.031 1.1E-06 55.1 5.5 47 163-209 223-273 (409)
299 1g60_A Adenine-specific methyl 94.5 0.03 1E-06 51.5 4.5 44 164-209 210-255 (260)
300 3fpc_A NADP-dependent alcohol 94.5 0.094 3.2E-06 49.9 8.2 44 160-203 160-204 (352)
301 1g55_A DNA cytosine methyltran 94.5 0.022 7.6E-07 54.8 3.8 73 168-240 3-84 (343)
302 1pl8_A Human sorbitol dehydrog 94.1 0.23 7.8E-06 47.3 10.0 43 161-203 166-209 (356)
303 3g7u_A Cytosine-specific methy 94.0 0.045 1.5E-06 53.5 4.9 121 168-295 3-136 (376)
304 3c6k_A Spermine synthase; sper 93.8 0.26 9E-06 48.3 9.8 107 166-282 205-335 (381)
305 3s2e_A Zinc-containing alcohol 93.5 0.22 7.7E-06 46.9 8.6 41 162-203 162-203 (340)
306 2efj_A 3,7-dimethylxanthine me 93.4 0.17 5.8E-06 49.7 7.8 24 260-283 206-229 (384)
307 2c7p_A Modification methylase 93.2 0.07 2.4E-06 51.1 4.5 122 167-297 11-139 (327)
308 4a2c_A Galactitol-1-phosphate 93.0 0.44 1.5E-05 44.8 9.8 48 160-207 154-203 (346)
309 3jv7_A ADH-A; dehydrogenase, n 92.7 0.4 1.4E-05 45.3 9.0 41 163-203 168-209 (345)
310 4ej6_A Putative zinc-binding d 92.4 0.14 4.8E-06 49.3 5.5 44 160-203 176-220 (370)
311 2oo3_A Protein involved in cat 92.4 0.039 1.3E-06 52.1 1.4 105 166-298 91-213 (283)
312 1f8f_A Benzyl alcohol dehydrog 92.3 0.39 1.3E-05 45.8 8.6 42 162-203 186-228 (371)
313 3ubt_Y Modification methylase 92.2 0.79 2.7E-05 42.9 10.4 123 168-298 1-130 (331)
314 3m6i_A L-arabinitol 4-dehydrog 92.2 0.51 1.8E-05 44.8 9.1 43 161-203 174-217 (363)
315 3two_A Mannitol dehydrogenase; 92.2 0.27 9.1E-06 46.6 7.1 41 162-203 172-213 (348)
316 3uko_A Alcohol dehydrogenase c 92.1 0.52 1.8E-05 45.1 9.1 42 162-203 189-231 (378)
317 1m6e_X S-adenosyl-L-methionnin 91.8 0.15 5.1E-06 49.6 4.9 107 167-282 52-212 (359)
318 2k4m_A TR8_protein, UPF0146 pr 91.5 0.15 5E-06 43.8 3.9 39 164-203 33-72 (153)
319 1p0f_A NADP-dependent alcohol 91.1 0.86 2.9E-05 43.5 9.5 42 162-203 187-229 (373)
320 1e3j_A NADP(H)-dependent ketos 91.1 0.77 2.6E-05 43.4 9.0 42 161-203 163-205 (352)
321 1e3i_A Alcohol dehydrogenase, 91.0 0.89 3E-05 43.4 9.5 42 162-203 191-233 (376)
322 1cdo_A Alcohol dehydrogenase; 90.8 0.97 3.3E-05 43.1 9.5 42 162-203 188-230 (374)
323 1vj0_A Alcohol dehydrogenase, 90.7 0.73 2.5E-05 44.3 8.6 42 162-203 190-233 (380)
324 2jhf_A Alcohol dehydrogenase E 90.6 1 3.5E-05 43.0 9.5 42 162-203 187-229 (374)
325 2fzw_A Alcohol dehydrogenase c 90.6 1 3.4E-05 42.9 9.4 42 162-203 186-228 (373)
326 3uog_A Alcohol dehydrogenase; 88.5 0.86 3E-05 43.4 7.1 41 162-203 185-226 (363)
327 1boo_A Protein (N-4 cytosine-s 87.7 0.54 1.8E-05 44.5 5.0 44 164-209 250-295 (323)
328 2dq4_A L-threonine 3-dehydroge 87.6 1.3 4.5E-05 41.6 7.7 42 161-203 160-202 (343)
329 3me5_A Cytosine-specific methy 87.2 0.28 9.5E-06 49.6 2.8 41 167-208 88-130 (482)
330 3rih_A Short chain dehydrogena 86.2 5 0.00017 37.0 10.7 127 149-280 15-178 (293)
331 2dph_A Formaldehyde dismutase; 86.0 0.9 3.1E-05 43.8 5.7 42 162-203 181-223 (398)
332 2qrv_A DNA (cytosine-5)-methyl 85.7 0.59 2E-05 44.0 4.1 76 165-240 14-99 (295)
333 1rjw_A ADH-HT, alcohol dehydro 85.7 3.1 0.00011 39.0 9.2 41 162-203 160-201 (339)
334 1eg2_A Modification methylase 85.4 0.8 2.7E-05 43.5 4.9 45 164-210 240-289 (319)
335 3ip1_A Alcohol dehydrogenase, 85.1 2.3 7.8E-05 41.1 8.1 44 163-206 210-255 (404)
336 3gms_A Putative NADPH:quinone 84.7 2.1 7.1E-05 40.2 7.4 42 161-203 139-182 (340)
337 2h6e_A ADH-4, D-arabinose 1-de 84.3 1.8 6.3E-05 40.6 6.8 40 163-203 168-209 (344)
338 4dvj_A Putative zinc-dependent 84.2 2.3 7.8E-05 40.5 7.5 38 166-203 171-210 (363)
339 3qv2_A 5-cytosine DNA methyltr 84.0 0.91 3.1E-05 43.3 4.6 71 167-237 10-89 (327)
340 2d8a_A PH0655, probable L-thre 83.4 2.6 8.9E-05 39.6 7.5 41 162-203 164-205 (348)
341 1ja9_A 4HNR, 1,3,6,8-tetrahydr 83.1 8.8 0.0003 34.0 10.6 108 167-280 21-156 (274)
342 4eso_A Putative oxidoreductase 81.9 9.6 0.00033 34.0 10.4 106 166-280 7-139 (255)
343 3oig_A Enoyl-[acyl-carrier-pro 81.8 16 0.00054 32.4 11.8 110 167-280 7-148 (266)
344 1kol_A Formaldehyde dehydrogen 81.6 1.9 6.4E-05 41.5 5.8 42 162-203 181-223 (398)
345 4fs3_A Enoyl-[acyl-carrier-pro 81.5 13 0.00044 33.3 11.1 110 166-279 5-146 (256)
346 4b7c_A Probable oxidoreductase 81.2 3.7 0.00013 38.2 7.6 42 161-203 144-187 (336)
347 4h0n_A DNMT2; SAH binding, tra 79.9 1.4 4.9E-05 42.0 4.3 70 169-238 5-83 (333)
348 1pqw_A Polyketide synthase; ro 79.7 2.1 7.1E-05 36.6 4.9 41 162-203 34-76 (198)
349 3o38_A Short chain dehydrogena 79.6 15 0.00052 32.5 10.9 108 167-279 22-160 (266)
350 3jyn_A Quinone oxidoreductase; 78.8 3.5 0.00012 38.4 6.5 40 162-203 136-178 (325)
351 3pk0_A Short-chain dehydrogena 77.6 20 0.00067 32.0 11.0 110 167-281 10-148 (262)
352 3vyw_A MNMC2; tRNA wobble urid 76.7 14 0.00048 34.9 10.0 40 260-310 207-246 (308)
353 3ijr_A Oxidoreductase, short c 75.4 26 0.00087 31.8 11.4 108 167-280 47-183 (291)
354 3is3_A 17BETA-hydroxysteroid d 75.3 28 0.00095 31.1 11.4 110 167-282 18-155 (270)
355 4fgs_A Probable dehydrogenase 75.0 14 0.00047 34.1 9.4 105 166-279 28-159 (273)
356 3h7a_A Short chain dehydrogena 75.0 24 0.00082 31.2 10.8 107 167-279 7-141 (252)
357 4fn4_A Short chain dehydrogena 74.9 15 0.00053 33.4 9.6 107 167-279 7-143 (254)
358 4eye_A Probable oxidoreductase 74.7 5.4 0.00018 37.4 6.7 41 162-203 155-197 (342)
359 2b5w_A Glucose dehydrogenase; 74.7 4.3 0.00015 38.3 6.0 40 162-203 162-215 (357)
360 3qwb_A Probable quinone oxidor 74.7 6 0.0002 36.8 6.9 39 163-203 145-186 (334)
361 3grk_A Enoyl-(acyl-carrier-pro 74.4 23 0.00078 32.3 10.8 109 166-280 30-170 (293)
362 2c0c_A Zinc binding alcohol de 74.2 12 0.00041 35.3 9.0 41 162-203 159-201 (362)
363 3ek2_A Enoyl-(acyl-carrier-pro 74.1 15 0.0005 32.5 9.1 109 166-280 13-154 (271)
364 3k31_A Enoyl-(acyl-carrier-pro 74.1 19 0.00066 32.8 10.2 109 166-280 29-169 (296)
365 4g81_D Putative hexonate dehyd 74.1 15 0.0005 33.5 9.2 108 167-280 9-146 (255)
366 1uuf_A YAHK, zinc-type alcohol 73.9 4.4 0.00015 38.7 5.8 40 163-203 191-231 (369)
367 3pvc_A TRNA 5-methylaminomethy 73.5 8.2 0.00028 40.0 8.2 38 260-308 192-229 (689)
368 3ksu_A 3-oxoacyl-acyl carrier 73.4 25 0.00084 31.4 10.5 109 167-281 11-149 (262)
369 3imf_A Short chain dehydrogena 73.3 35 0.0012 30.1 11.5 109 167-281 6-144 (257)
370 3pgx_A Carveol dehydrogenase; 72.7 22 0.00075 31.9 10.1 109 166-280 14-165 (280)
371 3tjr_A Short chain dehydrogena 72.6 18 0.00063 33.0 9.7 109 166-280 30-168 (301)
372 3tfo_A Putative 3-oxoacyl-(acy 72.5 24 0.00084 31.7 10.4 107 167-279 4-139 (264)
373 3pxx_A Carveol dehydrogenase; 71.9 28 0.00096 31.0 10.6 107 167-280 10-154 (287)
374 3v2g_A 3-oxoacyl-[acyl-carrier 71.7 33 0.0011 30.8 11.1 110 166-281 30-167 (271)
375 3rkr_A Short chain oxidoreduct 71.5 36 0.0012 30.1 11.2 110 166-281 28-167 (262)
376 3gaf_A 7-alpha-hydroxysteroid 70.2 20 0.00069 31.8 9.1 108 167-280 12-147 (256)
377 1xa0_A Putative NADPH dependen 69.8 4.6 0.00016 37.4 4.9 40 163-203 145-187 (328)
378 3svt_A Short-chain type dehydr 69.7 41 0.0014 30.0 11.3 111 167-280 11-151 (281)
379 3r1i_A Short-chain type dehydr 69.3 23 0.00078 31.9 9.4 109 166-280 31-169 (276)
380 1xu9_A Corticosteroid 11-beta- 69.2 31 0.001 30.9 10.3 57 167-228 28-88 (286)
381 3nyw_A Putative oxidoreductase 69.2 23 0.00077 31.4 9.2 111 167-280 7-145 (250)
382 4dqx_A Probable oxidoreductase 69.0 35 0.0012 30.7 10.6 105 167-280 27-160 (277)
383 1iz0_A Quinone oxidoreductase; 68.7 7 0.00024 35.8 5.8 39 164-203 123-163 (302)
384 4ft4_B DNA (cytosine-5)-methyl 68.7 3.1 0.00011 43.9 3.8 44 165-208 210-260 (784)
385 3lyl_A 3-oxoacyl-(acyl-carrier 68.6 36 0.0012 29.6 10.4 108 167-280 5-141 (247)
386 1g0o_A Trihydroxynaphthalene r 68.4 42 0.0014 30.0 11.0 108 167-280 29-164 (283)
387 3u5t_A 3-oxoacyl-[acyl-carrier 68.2 28 0.00096 31.2 9.7 109 167-281 27-163 (267)
388 3f1l_A Uncharacterized oxidore 68.1 28 0.00096 30.7 9.6 109 167-280 12-152 (252)
389 3v8b_A Putative dehydrogenase, 67.6 39 0.0013 30.5 10.6 109 166-280 27-165 (283)
390 4e6p_A Probable sorbitol dehyd 67.6 33 0.0011 30.3 10.0 106 166-280 7-142 (259)
391 1v3u_A Leukotriene B4 12- hydr 67.5 7.2 0.00025 36.2 5.7 41 162-203 141-183 (333)
392 4egf_A L-xylulose reductase; s 67.4 20 0.00067 32.0 8.5 109 167-280 20-158 (266)
393 4dry_A 3-oxoacyl-[acyl-carrier 67.4 22 0.00074 32.2 8.8 110 166-280 32-173 (281)
394 3tox_A Short chain dehydrogena 67.0 27 0.00091 31.6 9.4 108 167-280 8-145 (280)
395 3ucx_A Short chain dehydrogena 66.8 30 0.001 30.7 9.6 110 166-281 10-148 (264)
396 3lf2_A Short chain oxidoreduct 66.8 39 0.0013 30.0 10.3 109 167-279 8-145 (265)
397 3i1j_A Oxidoreductase, short c 66.7 41 0.0014 29.1 10.3 110 167-281 14-155 (247)
398 2jah_A Clavulanic acid dehydro 66.7 34 0.0012 30.0 9.8 108 167-280 7-142 (247)
399 3ftp_A 3-oxoacyl-[acyl-carrier 65.9 26 0.00089 31.4 9.0 108 167-280 28-164 (270)
400 2zb4_A Prostaglandin reductase 65.9 17 0.00057 34.0 8.0 42 161-203 153-199 (357)
401 3sju_A Keto reductase; short-c 65.8 37 0.0013 30.5 10.1 108 167-280 24-162 (279)
402 3ioy_A Short-chain dehydrogena 65.6 32 0.0011 31.7 9.8 109 167-279 8-151 (319)
403 3edm_A Short chain dehydrogena 65.5 37 0.0013 30.1 9.9 109 167-281 8-145 (259)
404 1piw_A Hypothetical zinc-type 65.5 7.3 0.00025 36.7 5.3 41 162-203 175-216 (360)
405 3dii_A Short-chain dehydrogena 65.4 38 0.0013 29.7 9.9 102 169-280 4-133 (247)
406 4dkj_A Cytosine-specific methy 65.3 3.4 0.00012 40.6 3.0 42 168-209 11-59 (403)
407 3op4_A 3-oxoacyl-[acyl-carrier 65.2 47 0.0016 29.2 10.5 105 167-280 9-142 (248)
408 4fc7_A Peroxisomal 2,4-dienoyl 65.1 32 0.0011 30.8 9.5 109 167-280 27-164 (277)
409 3tsc_A Putative oxidoreductase 64.6 37 0.0013 30.3 9.8 108 167-280 11-161 (277)
410 3oid_A Enoyl-[acyl-carrier-pro 64.6 53 0.0018 29.0 10.8 107 167-279 4-140 (258)
411 4ibo_A Gluconate dehydrogenase 64.2 28 0.00096 31.2 8.9 108 167-280 26-162 (271)
412 1wma_A Carbonyl reductase [NAD 64.0 42 0.0014 29.2 9.8 108 167-280 4-139 (276)
413 3uve_A Carveol dehydrogenase ( 63.7 44 0.0015 29.9 10.2 108 167-280 11-165 (286)
414 3gvc_A Oxidoreductase, probabl 63.7 45 0.0015 30.0 10.2 105 167-280 29-162 (277)
415 4imr_A 3-oxoacyl-(acyl-carrier 63.5 42 0.0014 30.1 10.0 109 166-280 32-168 (275)
416 3l77_A Short-chain alcohol deh 63.5 37 0.0013 29.3 9.3 55 169-228 4-62 (235)
417 4da9_A Short-chain dehydrogena 63.4 32 0.0011 31.0 9.1 57 166-228 28-89 (280)
418 3r3s_A Oxidoreductase; structu 63.0 37 0.0013 30.7 9.6 108 167-280 49-186 (294)
419 1yb5_A Quinone oxidoreductase; 62.9 13 0.00044 35.0 6.6 40 162-203 166-208 (351)
420 2bgk_A Rhizome secoisolaricire 62.9 68 0.0023 28.1 11.2 107 167-280 16-153 (278)
421 2a4k_A 3-oxoacyl-[acyl carrier 62.3 50 0.0017 29.4 10.2 106 167-281 6-138 (263)
422 2ae2_A Protein (tropinone redu 62.1 71 0.0024 28.0 11.1 56 167-228 9-68 (260)
423 3fbg_A Putative arginate lyase 62.1 14 0.00049 34.4 6.7 36 166-203 150-188 (346)
424 1geg_A Acetoin reductase; SDR 61.8 44 0.0015 29.3 9.6 51 173-228 7-61 (256)
425 4a0s_A Octenoyl-COA reductase/ 61.8 8.9 0.0003 37.3 5.3 40 162-203 216-258 (447)
426 3swr_A DNA (cytosine-5)-methyl 61.5 5.1 0.00017 43.9 3.8 43 167-209 540-584 (1002)
427 1yb1_A 17-beta-hydroxysteroid 61.3 55 0.0019 29.0 10.3 56 167-228 31-90 (272)
428 3krt_A Crotonyl COA reductase; 61.3 15 0.0005 36.0 6.8 41 162-203 224-266 (456)
429 3l6e_A Oxidoreductase, short-c 61.1 47 0.0016 28.9 9.6 102 169-279 5-134 (235)
430 3pi7_A NADH oxidoreductase; gr 61.1 13 0.00046 34.6 6.3 38 165-203 162-202 (349)
431 1wly_A CAAR, 2-haloacrylate re 61.0 19 0.00067 33.2 7.3 40 162-203 141-183 (333)
432 4dup_A Quinone oxidoreductase; 60.8 16 0.00053 34.3 6.7 40 162-203 163-205 (353)
433 3oec_A Carveol dehydrogenase ( 60.7 56 0.0019 29.9 10.5 33 166-199 45-79 (317)
434 3qiv_A Short-chain dehydrogena 60.3 52 0.0018 28.6 9.8 56 167-228 9-68 (253)
435 2pd4_A Enoyl-[acyl-carrier-pro 60.2 37 0.0013 30.2 8.9 109 167-280 6-145 (275)
436 3t4x_A Oxidoreductase, short c 60.2 64 0.0022 28.5 10.5 109 167-279 10-143 (267)
437 1vl8_A Gluconate 5-dehydrogena 60.2 58 0.002 28.9 10.2 109 167-280 21-158 (267)
438 3t7c_A Carveol dehydrogenase; 59.8 63 0.0022 29.2 10.5 32 167-199 28-61 (299)
439 1spx_A Short-chain reductase f 59.6 48 0.0017 29.3 9.6 59 167-228 6-68 (278)
440 1qor_A Quinone oxidoreductase; 59.4 19 0.00065 33.1 6.9 40 162-203 136-178 (327)
441 4dyv_A Short-chain dehydrogena 59.1 53 0.0018 29.4 9.8 105 167-280 28-164 (272)
442 3f9i_A 3-oxoacyl-[acyl-carrier 58.9 55 0.0019 28.4 9.6 43 166-209 13-59 (249)
443 1tt7_A YHFP; alcohol dehydroge 58.3 5.4 0.00019 37.0 2.9 40 163-203 146-188 (330)
444 1edo_A Beta-keto acyl carrier 58.2 73 0.0025 27.3 10.3 54 169-228 3-61 (244)
445 3goh_A Alcohol dehydrogenase, 57.4 9.8 0.00034 35.0 4.5 40 162-203 138-178 (315)
446 3nx4_A Putative oxidoreductase 57.3 8.5 0.00029 35.5 4.1 40 163-203 142-184 (324)
447 3ged_A Short-chain dehydrogena 57.2 74 0.0025 28.6 10.3 98 173-279 7-132 (247)
448 2p91_A Enoyl-[acyl-carrier-pro 57.1 64 0.0022 28.8 10.0 36 166-201 20-58 (285)
449 3qlj_A Short chain dehydrogena 56.8 54 0.0019 30.0 9.6 33 166-199 26-60 (322)
450 2bd0_A Sepiapterin reductase; 56.7 76 0.0026 27.2 10.1 54 169-228 4-68 (244)
451 3sc4_A Short chain dehydrogena 56.5 69 0.0024 28.7 10.2 108 167-280 9-152 (285)
452 1fmc_A 7 alpha-hydroxysteroid 56.0 69 0.0024 27.6 9.8 56 167-228 11-70 (255)
453 3m1a_A Putative dehydrogenase; 55.9 58 0.002 28.8 9.4 36 167-203 5-42 (281)
454 2wyu_A Enoyl-[acyl carrier pro 55.6 43 0.0015 29.6 8.4 109 167-280 8-147 (261)
455 2h7i_A Enoyl-[acyl-carrier-pro 55.5 77 0.0026 27.9 10.2 38 166-203 6-46 (269)
456 3ojo_A CAP5O; rossmann fold, c 55.4 30 0.001 34.1 7.8 37 260-297 110-146 (431)
457 1zem_A Xylitol dehydrogenase; 55.0 75 0.0026 27.9 10.0 108 167-280 7-144 (262)
458 4dmm_A 3-oxoacyl-[acyl-carrier 55.0 82 0.0028 28.0 10.3 108 167-280 28-165 (269)
459 3s55_A Putative short-chain de 54.8 76 0.0026 28.1 10.1 32 167-199 10-43 (281)
460 3gaz_A Alcohol dehydrogenase s 54.5 14 0.00048 34.5 5.1 40 162-203 146-187 (343)
461 1gee_A Glucose 1-dehydrogenase 54.4 82 0.0028 27.3 10.1 56 167-228 7-67 (261)
462 3v2h_A D-beta-hydroxybutyrate 54.4 58 0.002 29.2 9.2 109 167-280 25-163 (281)
463 3osu_A 3-oxoacyl-[acyl-carrier 54.3 86 0.0029 27.2 10.2 106 169-280 6-141 (246)
464 4a27_A Synaptic vesicle membra 54.2 16 0.00054 34.2 5.4 40 162-203 138-180 (349)
465 3tos_A CALS11; methyltransfera 54.0 1.2E+02 0.0042 27.5 11.3 107 166-281 70-219 (257)
466 3grp_A 3-oxoacyl-(acyl carrier 53.9 77 0.0026 28.2 9.9 37 166-203 26-64 (266)
467 2j8z_A Quinone oxidoreductase; 53.9 24 0.00082 33.0 6.7 41 162-203 158-200 (354)
468 3tqh_A Quinone oxidoreductase; 53.7 34 0.0012 31.4 7.6 40 162-203 148-189 (321)
469 2pd6_A Estradiol 17-beta-dehyd 53.1 72 0.0025 27.7 9.4 42 167-209 7-52 (264)
470 3rwb_A TPLDH, pyridoxal 4-dehy 52.8 64 0.0022 28.2 9.1 36 167-203 6-43 (247)
471 2uvd_A 3-oxoacyl-(acyl-carrier 52.5 95 0.0033 26.9 10.1 56 167-228 4-64 (246)
472 1qsg_A Enoyl-[acyl-carrier-pro 52.5 46 0.0016 29.4 8.1 35 166-200 8-45 (265)
473 3av4_A DNA (cytosine-5)-methyl 52.5 8.4 0.00029 43.5 3.6 44 166-209 850-895 (1330)
474 3cxt_A Dehydrogenase with diff 52.4 71 0.0024 28.9 9.5 56 167-228 34-93 (291)
475 2b4q_A Rhamnolipids biosynthes 52.4 58 0.002 29.1 8.9 42 167-209 29-74 (276)
476 3awd_A GOX2181, putative polyo 52.1 83 0.0028 27.2 9.7 56 167-228 13-72 (260)
477 1yxm_A Pecra, peroxisomal tran 52.1 83 0.0028 28.1 9.9 61 167-228 18-82 (303)
478 3o26_A Salutaridine reductase; 52.1 72 0.0024 28.3 9.4 56 167-227 12-71 (311)
479 3afn_B Carbonyl reductase; alp 51.8 87 0.003 26.9 9.7 56 167-228 7-67 (258)
480 1nff_A Putative oxidoreductase 51.6 92 0.0031 27.4 10.0 36 167-203 7-44 (260)
481 1w6u_A 2,4-dienoyl-COA reducta 51.3 79 0.0027 28.2 9.6 57 167-228 26-86 (302)
482 3guy_A Short-chain dehydrogena 51.2 89 0.0031 26.7 9.6 31 173-203 6-38 (230)
483 3d3w_A L-xylulose reductase; u 50.2 96 0.0033 26.5 9.7 37 166-203 6-44 (244)
484 3uf0_A Short-chain dehydrogena 49.9 1.3E+02 0.0045 26.7 10.9 108 167-280 31-165 (273)
485 1wg8_A Predicted S-adenosylmet 49.4 8.6 0.00029 36.0 2.7 38 257-297 211-248 (285)
486 2rhc_B Actinorhodin polyketide 49.1 94 0.0032 27.6 9.7 56 167-228 22-81 (277)
487 1ae1_A Tropinone reductase-I; 48.9 97 0.0033 27.4 9.7 55 167-227 21-79 (273)
488 4iin_A 3-ketoacyl-acyl carrier 48.7 86 0.0029 27.7 9.3 108 167-280 29-166 (271)
489 1iy8_A Levodione reductase; ox 48.6 1E+02 0.0035 27.1 9.8 58 167-228 13-74 (267)
490 3gk3_A Acetoacetyl-COA reducta 48.5 1.1E+02 0.0037 27.0 9.9 108 167-280 25-162 (269)
491 1h2b_A Alcohol dehydrogenase; 48.2 24 0.00081 33.1 5.7 40 162-203 182-224 (359)
492 1hxh_A 3BETA/17BETA-hydroxyste 48.1 1.2E+02 0.0042 26.3 10.2 36 167-203 6-43 (253)
493 3ai3_A NADPH-sorbose reductase 47.7 1.3E+02 0.0044 26.3 10.3 57 167-228 7-67 (263)
494 3n74_A 3-ketoacyl-(acyl-carrie 47.3 1.2E+02 0.0042 26.2 10.1 36 167-203 9-46 (261)
495 1xhl_A Short-chain dehydrogena 47.0 1.2E+02 0.0041 27.3 10.2 57 167-228 26-88 (297)
496 4e3z_A Putative oxidoreductase 46.9 1.5E+02 0.0051 26.0 10.8 108 167-280 26-167 (272)
497 1xkq_A Short-chain reductase f 46.5 1.3E+02 0.0044 26.6 10.2 57 167-228 6-68 (280)
498 3e03_A Short chain dehydrogena 46.2 96 0.0033 27.5 9.3 108 167-280 6-149 (274)
499 2nwq_A Probable short-chain de 46.0 1.4E+02 0.0049 26.4 10.5 53 169-228 23-79 (272)
500 1xg5_A ARPG836; short chain de 45.8 1.3E+02 0.0045 26.5 10.1 57 167-228 32-93 (279)
No 1
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=3.2e-53 Score=417.18 Aligned_cols=238 Identities=37% Similarity=0.578 Sum_probs=201.5
Q ss_pred CCCCccceeEecCCCCcccCCCCCCCCcceeeEEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEE
Q psy7769 116 LHISPYLQAFSFPSGDISEFPSPKRGVTGVFNYYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCM 195 (355)
Q Consensus 116 ~~~p~~l~~~~~~~~~~~~~p~~~~g~~~~~~~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~A 195 (355)
+.+++.+.++.+++|++.++|+++.|..+++.||+||++||+++.+|+|+||++||||||||||||+|||++++.+.|+|
T Consensus 98 ~~~~~~l~~~~~~~g~~~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A 177 (359)
T 4fzv_A 98 WACSPNLRCFTFDRGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAA 177 (359)
T ss_dssp HHSCSSCCEEECCTTCCCCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEE
T ss_pred ccCCccceEEecCCCChhcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEE
Confidence 55778899999999999999999999999999999999999999999999999999999999999999999887789999
Q ss_pred EcCCchhh--HHhhcccccc--ccCcceEEEEEecce-------------eeecccCCCCC-ccCCc--cc--cchHHHH
Q psy7769 196 DGASLLPV--LALNIRPYDT--VLDIHALKLVKVGGS-------------VVYSTCSLSPI-QNDGV--VH--MSLKRIW 253 (355)
Q Consensus 196 vD~s~~Rl--l~~~l~r~~~--~~g~~~v~~~~~Da~-------------~lDaPCSgsG~-t~~~~--l~--~~~~~l~ 253 (355)
+|+++.|+ +++|++|+.. +....++.++..|+. +|||||||+|+ +.+++ +. |++..+.
T Consensus 178 ~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~ 257 (359)
T 4fzv_A 178 NDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQ 257 (359)
T ss_dssp ECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHH
T ss_pred EcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHH
Confidence 99999999 8999984320 011246788777653 39999999852 33444 33 6788899
Q ss_pred hhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccCceEEEecccccccccccccccccCCCccE
Q psy7769 254 EETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKDLSQALRPLKSLFSFANINLSYG 332 (355)
Q Consensus 254 ~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g 332 (355)
.+..+| +||.+|+++|||||+|||||||++++|||+||++||+++++...+.+.+.++......+.+.+.|.+.. ++|
T Consensus 258 ~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g 336 (359)
T 4fzv_A 258 ILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQVEDLTHFRRVFMDTFCFFSSC-QVG 336 (359)
T ss_dssp THHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHTTTCEECTTC-SSS
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCCCCcccccccccccccccccccccccCccc-cce
Confidence 999999 999999999999999999999999999999999999998766667777777655443344444555554 789
Q ss_pred EEEecCCCCCCCceEEEEEEEc
Q psy7769 333 HLVQPHLPSNFGPMYFCKFDKI 354 (355)
Q Consensus 333 ~~~~P~~~~~~~gfFia~l~r~ 354 (355)
.+++||.+.++||||+|+|+|.
T Consensus 337 ~r~~P~~~~~~gGFFiA~L~Kv 358 (359)
T 4fzv_A 337 ELVIPNLMANFGPMYFCKMRRL 358 (359)
T ss_dssp EEEECBTTBCCCCEEEEEEEEC
T ss_pred EEECCCCCCCCCCEEEEEEEEC
Confidence 9999999888999999999996
No 2
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=4.4e-43 Score=338.81 Aligned_cols=259 Identities=22% Similarity=0.237 Sum_probs=186.4
Q ss_pred CCCCCcceecccCCCChhhhhhh---ccccccCCCCCc--ceee-CCC---cCCCCCccceeEecCCCCcccCCCCCCCC
Q psy7769 72 STGLHDFIPATQLKGMEGFITDA---DYMDYYRPSPEV--DFKV-VPE---TELHISPYLQAFSFPSGDISEFPSPKRGV 142 (355)
Q Consensus 72 ~~~l~~~~rvn~lk~~~~~i~e~---~~~~~~~~~~~~--~~~v-~~~---~~~~~p~~l~~~~~~~~~~~~~p~~~~g~ 142 (355)
...+|.|+|||++|...+.+.+. +.+.... .+.. .++. ... -..++|..+.+ ....++..+|.++.|.
T Consensus 7 ~~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~l~~--~~~~~~~~~~~~~~G~ 83 (309)
T 2b9e_A 7 ASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQG-RASSLDDLRALKGKHFLLDPLMPELLVF--PAQTDLHEHPLYRAGH 83 (309)
T ss_dssp --CCCEEEEECTTTCCHHHHHHHHHHTTCEEEE-ECSSHHHHHTCCTTEEEECSSSTTEEEE--CTTCCCTTSHHHHTTS
T ss_pred CCCCCeEEEEeCCCCCHHHHHHHHHhCCCeeee-ccccccccccccccccccccCCCceEEe--CCCCCcccChHHHCCe
Confidence 35588999999999998866543 2332110 0000 0000 000 02346766655 2335788889999887
Q ss_pred cceeeEEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh--HHhhccccccccCcce
Q psy7769 143 TGVFNYYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV--LALNIRPYDTVLDIHA 219 (355)
Q Consensus 143 ~~~~~~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~ 219 (355)
||+||++|++++.+|++++|++|||+|||||+||+++|+.+ +.++|+|+|+++.|+ +++|+++ .|..+
T Consensus 84 -----~~~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r----~g~~~ 154 (309)
T 2b9e_A 84 -----LILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLAR----AGVSC 154 (309)
T ss_dssp -----EEECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----TTCCS
T ss_pred -----EEEECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH----cCCCe
Confidence 99999999999999999999999999999999999999986 458999999999999 9999984 45567
Q ss_pred EEEEEecc---------------eeeecccCCCCCccCCc--cc----cchHHHHhhhhHH-HHHHHHHhhccCCcEEEE
Q psy7769 220 LKLVKVGG---------------SVVYSTCSLSPIQNDGV--VH----MSLKRIWEETGCE-IEIKHALKLVKVGGSVVY 277 (355)
Q Consensus 220 v~~~~~Da---------------~~lDaPCSgsG~t~~~~--l~----~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVY 277 (355)
+.++..|+ ..+||||||+| +.+++ ++ |+++++..+..+| +||++|+++++ ||+|||
T Consensus 155 v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcSg~G-~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvY 232 (309)
T 2b9e_A 155 CELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSG-MPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVY 232 (309)
T ss_dssp EEEEECCGGGSCTTCGGGTTEEEEEECCCCCC-------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEE
T ss_pred EEEEeCChHhcCccccccCCCCEEEEcCCcCCCC-CCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEE
Confidence 77776553 34999999999 55553 43 4677889999999 99999999997 999999
Q ss_pred EeCCCCCCCCHHHHHHHHHhhhhccCceEEEeccccccc--ccccccccccCCCccEEEEecCCCCCCCceEEEEEEEc
Q psy7769 278 STCSLSPIQNDGVVHMSLKRIWEETGCEIEIKDLSQALR--PLKSLFSFANINLSYGHLVQPHLPSNFGPMYFCKFDKI 354 (355)
Q Consensus 278 sTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~g~~~~P~~~~~~~gfFia~l~r~ 354 (355)
||||++++|||+||++||++++ + .++++++.+.++ +.. .+ +. ...+.+++||.+ ++||||+|+|+|.
T Consensus 233 sTCs~~~~Ene~~v~~~l~~~~---~-~~~~~~~~~~~~~~~~~---~~-~~-~~~~~r~~P~~~-~~dGfF~A~l~k~ 301 (309)
T 2b9e_A 233 STCSLCQEENEDVVRDALQQNP---G-AFRLAPALPAWPHRGLS---TF-PG-AEHCLRASPETT-LSSGFFVAVIERV 301 (309)
T ss_dssp EESCCCGGGTHHHHHHHHTTST---T-TEEECCCCTTCCCBCCS---SS-TT-GGGSEEECHHHH-SSCSEEEEEEEEC
T ss_pred ECCCCChHHhHHHHHHHHHhCC---C-cEEEecccccccccccc---cc-CC-CCCeEEECCCCC-CCCCeEEEEEEEC
Confidence 9999999999999999998763 2 255565533221 111 11 11 246789999987 7899999999986
No 3
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=5.6e-42 Score=346.79 Aligned_cols=218 Identities=17% Similarity=0.187 Sum_probs=173.8
Q ss_pred cCCCCCccceeEecCCCCcccCCCCCCCCcceeeEEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCc
Q psy7769 114 TELHISPYLQAFSFPSGDISEFPSPKRGVTGVFNYYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDY 192 (355)
Q Consensus 114 ~~~~~p~~l~~~~~~~~~~~~~p~~~~g~~~~~~~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~ 192 (355)
+.++.|..+. . ..+...|.+..|. ||+||++|++++.+|++++|++|||+|||||+||+++|+.++ .|.
T Consensus 63 ~~~~~~~~~~---~--~~~~~~~~~~~G~-----~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~ 132 (456)
T 3m4x_A 63 PAPYSNEGFL---G--TVNGKSFLHQAGY-----EYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGL 132 (456)
T ss_dssp BCTTCTTEEE---S--CCCTTSHHHHTTS-----CEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSE
T ss_pred CCCCCcceEE---c--CCCCCChHHhCCc-----EEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCE
Confidence 4456676544 1 2356778888887 999999999999999999999999999999999999998764 489
Q ss_pred EEEEcCCchhh--HHhhccccccccCcceEEEEEecc-------------eeeecccCCCCCccCCc--c--ccchHHHH
Q psy7769 193 YCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG-------------SVVYSTCSLSPIQNDGV--V--HMSLKRIW 253 (355)
Q Consensus 193 V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da-------------~~lDaPCSgsG~t~~~~--l--~~~~~~l~ 253 (355)
|+|+|+++.|+ +++|+++ .|..++.+++.|+ ..+|+||||+| +.+++ + .|+++.+.
T Consensus 133 V~AvDis~~rl~~~~~n~~r----~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G-~~rr~p~~~~~~~~~~~~ 207 (456)
T 3m4x_A 133 LVTNEIFPKRAKILSENIER----WGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEG-MFRKDPNAIKEWTEESPL 207 (456)
T ss_dssp EEEECSSHHHHHHHHHHHHH----HTCSSEEEECCCHHHHHHHHTTCEEEEEEECCCCCGG-GTTTCHHHHHHCCTTHHH
T ss_pred EEEEeCCHHHHHHHHHHHHH----cCCCceEEEeCCHHHhhhhccccCCEEEECCCCCCcc-ccccCHHHhhhcCHHHHH
Confidence 99999999999 9999984 4666788876654 34999999999 55665 3 38889999
Q ss_pred hhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccCceEEEecccccccccccc-ccccc-CCCc
Q psy7769 254 EETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKDLSQALRPLKSL-FSFAN-INLS 330 (355)
Q Consensus 254 ~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~-~~~~ 330 (355)
.+..+| ++|.+|+++|||||+|||||||++++|||+||+++|+++ + ++++++.... ++... ..+.. ....
T Consensus 208 ~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~----~--~~l~~~~~~~-~~~~~~~~~~~~~~~~ 280 (456)
T 3m4x_A 208 YCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENY----P--VTIEEIPLTQ-SVSSGRSEWGSVAGLE 280 (456)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHS----S--EEEECCCCSS-CCEECCGGGSSSTTGG
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhC----C--CEEEeccccc-cccccccccccccccC
Confidence 999999 999999999999999999999999999999999999975 3 5555553211 11000 01110 0124
Q ss_pred cEEEEecCCCCCCCceEEEEEEEc
Q psy7769 331 YGHLVQPHLPSNFGPMYFCKFDKI 354 (355)
Q Consensus 331 ~g~~~~P~~~~~~~gfFia~l~r~ 354 (355)
.+.+++||.+ +++|||+|+|+|.
T Consensus 281 ~~~r~~P~~~-~~dGFF~A~l~k~ 303 (456)
T 3m4x_A 281 KTIRIWPHKD-QGEGHFVAKLTFH 303 (456)
T ss_dssp GSEEECTTTS-SSSCEEEEEEEEC
T ss_pred CeEEECCCCC-CCcCeEEEEEEEC
Confidence 5789999997 6799999999985
No 4
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=1.8e-41 Score=343.67 Aligned_cols=247 Identities=19% Similarity=0.180 Sum_probs=191.1
Q ss_pred CCcceecccCCCChhhhhhhccccccCCCCCcceeeCCCcCCCCCccceeEecCCCCcccCCCCCCCCcceeeEEEechh
Q psy7769 75 LHDFIPATQLKGMEGFITDADYMDYYRPSPEVDFKVVPETELHISPYLQAFSFPSGDISEFPSPKRGVTGVFNYYCMDGA 154 (355)
Q Consensus 75 l~~~~rvn~lk~~~~~i~e~~~~~~~~~~~~~~~~v~~~~~~~~p~~l~~~~~~~~~~~~~p~~~~g~~~~~~~~~QD~a 154 (355)
.+.++|||++|...+.+.+.-. + ..++.++.|..+.+. ....+...|.+..|. +|+||++
T Consensus 30 ~~~~lRvN~lk~~~~~~~~~l~---------~----~~~~~~~~~~g~~l~--~~~~~~~~~~~~~G~-----~~vQd~s 89 (464)
T 3m6w_A 30 RTYGLRVNTLKLPPEAFQRISP---------W----PLRPIPWCQEGFYYP--EEARPGPHPFFYAGL-----YYIQEPS 89 (464)
T ss_dssp CCCEEEECTTTCCHHHHHHHCS---------S----CCEEETTEEEEEECC--TTCCCSSSHHHHTTS-----EEECCTT
T ss_pred CCeEEEEcCCCCCHHHHHHHcC---------C----CceecCCCCceEEEC--CCCCcccChHHhCCe-----EEEECHH
Confidence 5679999999999887766321 1 123445667665542 233567788888887 9999999
Q ss_pred cHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc----
Q psy7769 155 SLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG---- 227 (355)
Q Consensus 155 S~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da---- 227 (355)
|++++.+|++++|++|||+|||||+||+++|+.++ .|.|+|+|+++.|+ +++|+++ .|.. +.+++.|+
T Consensus 90 s~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r----~G~~-v~~~~~Da~~l~ 164 (464)
T 3m6w_A 90 AQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVER----WGAP-LAVTQAPPRALA 164 (464)
T ss_dssp THHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH----HCCC-CEEECSCHHHHH
T ss_pred HHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH----cCCe-EEEEECCHHHhh
Confidence 99999999999999999999999999999999875 48999999999999 8999984 3555 66666553
Q ss_pred ---------eeeecccCCCCCccCCc--c--ccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHH
Q psy7769 228 ---------SVVYSTCSLSPIQNDGV--V--HMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHM 293 (355)
Q Consensus 228 ---------~~lDaPCSgsG~t~~~~--l--~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~ 293 (355)
..+||||||+|+ .+++ + .|+++.+..+..+| ++|++|+++|||||+|||||||++++|||+||++
T Consensus 165 ~~~~~~FD~Il~D~PcSg~G~-~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~ 243 (464)
T 3m6w_A 165 EAFGTYFHRVLLDAPCSGEGM-FRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAH 243 (464)
T ss_dssp HHHCSCEEEEEEECCCCCGGG-TTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHH
T ss_pred hhccccCCEEEECCCcCCccc-cccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHH
Confidence 449999999994 4444 3 47889999999999 9999999999999999999999999999999999
Q ss_pred HHHhhhhccCceEEEeccccc--c-cccccccccccCCCccEEEEecCCCCCCCceEEEEEEEc
Q psy7769 294 SLKRIWEETGCEIEIKDLSQA--L-RPLKSLFSFANINLSYGHLVQPHLPSNFGPMYFCKFDKI 354 (355)
Q Consensus 294 ~L~~~~~~~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~~g~~~~P~~~~~~~gfFia~l~r~ 354 (355)
||+++ .+ ++++++... . ++... +.-.......+.+++||.+ +++|||+|+|+|.
T Consensus 244 ~l~~~---~~--~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~P~~~-~~dGfF~A~l~k~ 300 (464)
T 3m6w_A 244 FLKAH---PE--FRLEDARLHPLFAPGVPE-WGEGNPELLKTARLWPHRL-EGEGHFLARFRKE 300 (464)
T ss_dssp HHHHC---TT--EEEECCCCSTTSEECCGG-GTTTCGGGGGSEEECTTTS-SSSCEEEEEEEEC
T ss_pred HHHHC---CC--cEEEecccccccccCccc-ccccccccCCeEEECCCCC-CceeEEEEEEEEC
Confidence 99976 23 455554321 1 11100 0000011245789999997 6799999999996
No 5
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=2.8e-40 Score=319.08 Aligned_cols=252 Identities=21% Similarity=0.265 Sum_probs=191.8
Q ss_pred CCCCcceecccCCCChhhhhhh-ccccccCCCCCcceeeCCCcCCCCCccceeEecCCCCcccCCCCCCCCcceeeEEEe
Q psy7769 73 TGLHDFIPATQLKGMEGFITDA-DYMDYYRPSPEVDFKVVPETELHISPYLQAFSFPSGDISEFPSPKRGVTGVFNYYCM 151 (355)
Q Consensus 73 ~~l~~~~rvn~lk~~~~~i~e~-~~~~~~~~~~~~~~~v~~~~~~~~p~~l~~~~~~~~~~~~~p~~~~g~~~~~~~~~Q 151 (355)
..+|.++|||++|...+.+.+. +. ..+.+ ++.+++|..+.+.. ...++..+|.+..|. +++|
T Consensus 41 ~~~p~~~RvN~~k~~~~~~~~~L~~-------~g~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~-----~~~q 103 (315)
T 1ixk_A 41 KPLPRCFRVNTLKISVQDLVKRLNK-------KGFQF----KRVPWAKEGFCLTR-EPFSITSTPEFLTGL-----IYIQ 103 (315)
T ss_dssp SCCCCEEEECTTTSCHHHHHHHHHH-------TTCEE----EEETTEEEEEEEEE-CSSCGGGSHHHHTTS-----EEEC
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHh-------CCCee----eECCCCCceEEEeC-CCCCcccChhHhcce-----EEEe
Confidence 4478899999999988876653 10 01111 12344666665532 224677888888887 9999
Q ss_pred chhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc-
Q psy7769 152 DGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG- 227 (355)
Q Consensus 152 D~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da- 227 (355)
|.+|++++.+|++++|++|||+|||||++|+++++.++ .++|+|+|+++.|+ +++|+++ .+..++.+++.|+
T Consensus 104 d~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~----~g~~~v~~~~~D~~ 179 (315)
T 1ixk_A 104 EASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSR----LGVLNVILFHSSSL 179 (315)
T ss_dssp CHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH----HTCCSEEEESSCGG
T ss_pred CHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHH----hCCCeEEEEECChh
Confidence 99999999999999999999999999999999999874 48999999999999 8888883 3555677776654
Q ss_pred -----------eeeecccCCCCCccCCc--c--ccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHH
Q psy7769 228 -----------SVVYSTCSLSPIQNDGV--V--HMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVV 291 (355)
Q Consensus 228 -----------~~lDaPCSgsG~t~~~~--l--~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV 291 (355)
..+|+||||+|+ .+++ + +|+++++..+..+| ++|++++++|||||+|||||||++++|||.||
T Consensus 180 ~~~~~~~~fD~Il~d~Pcsg~g~-~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v 258 (315)
T 1ixk_A 180 HIGELNVEFDKILLDAPCTGSGT-IHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVI 258 (315)
T ss_dssp GGGGGCCCEEEEEEECCTTSTTT-CC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHH
T ss_pred hcccccccCCEEEEeCCCCCccc-ccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHH
Confidence 339999999994 4443 3 37888999999999 99999999999999999999999999999999
Q ss_pred HHHHHhhhhccCceEEEeccccccccccc--ccccccCCCccEEEEecCCCCCCCceEEEEEEEc
Q psy7769 292 HMSLKRIWEETGCEIEIKDLSQALRPLKS--LFSFANINLSYGHLVQPHLPSNFGPMYFCKFDKI 354 (355)
Q Consensus 292 ~~~L~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~g~~~~P~~~~~~~gfFia~l~r~ 354 (355)
+++|+++ + ++++++....+++.. ...+.+. ...+.+++||.+ ++||||+|+|+|.
T Consensus 259 ~~~l~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~P~~~-~~dGfF~A~l~k~ 315 (315)
T 1ixk_A 259 QWALDNF----D--VELLPLKYGEPALTNPFGIELSEE-IKNARRLYPDVH-ETSGFFIAKIRKL 315 (315)
T ss_dssp HHHHHHS----S--EEEECCCSSEECCSSGGGCCCCGG-GGGSEEECTTTS-SSCSEEEEEEEEC
T ss_pred HHHHhcC----C--CEEecCCccccCcccccccccccc-cCCEEEECCCCC-CcccEEEEEEEEC
Confidence 9999863 4 555565432222211 0012222 246789999997 7899999999985
No 6
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=8.1e-40 Score=333.09 Aligned_cols=250 Identities=20% Similarity=0.178 Sum_probs=188.9
Q ss_pred CCCcceecccCCCChhhhhhh-ccccccCCCCCcceeeCCCcCCCCCccceeEecC--CCCcccCCCCCCCCcceeeEEE
Q psy7769 74 GLHDFIPATQLKGMEGFITDA-DYMDYYRPSPEVDFKVVPETELHISPYLQAFSFP--SGDISEFPSPKRGVTGVFNYYC 150 (355)
Q Consensus 74 ~l~~~~rvn~lk~~~~~i~e~-~~~~~~~~~~~~~~~v~~~~~~~~p~~l~~~~~~--~~~~~~~p~~~~g~~~~~~~~~ 150 (355)
.+|.++|||++|...+.+.+. +..+. ..++.+++|+.+.+.... ...+...|.++.|. +|+
T Consensus 36 ~~p~~lRvN~lk~~~~~~~~~L~~~g~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-----~~~ 99 (479)
T 2frx_A 36 PLRRSIRVNTLKISVADFLQLTAPYGW-----------TLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGL-----FYI 99 (479)
T ss_dssp CCCCCEEECTTTCCHHHHHHHHGGGCC-----------CCCEETTEEEEEC---------CGGGSHHHHTTS-----EEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHcCC-----------ceeecCCCCceEEEecCcccccCcccChHHhCcE-----EEE
Confidence 378899999999998876653 11110 112334556555442110 11566778888887 999
Q ss_pred echhcHHHHHhhCCC--CCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCcceEEEEEe
Q psy7769 151 MDGASLLPVLALNIR--PYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKV 225 (355)
Q Consensus 151 QD~aS~l~~~~L~~~--pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~ 225 (355)
||++|++++.+|+++ +|++|||+|||||+||+++|+.++ .|.|+|+|+++.|+ +++|+++ .|..++.+++.
T Consensus 100 Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r----~g~~nv~~~~~ 175 (479)
T 2frx_A 100 QEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISR----CGISNVALTHF 175 (479)
T ss_dssp CCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHH----HTCCSEEEECC
T ss_pred ECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH----cCCCcEEEEeC
Confidence 999999999999999 999999999999999999999874 58999999999999 9999984 45667888776
Q ss_pred cc-------------eeeecccCCCCCccCCc--c--ccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCC
Q psy7769 226 GG-------------SVVYSTCSLSPIQNDGV--V--HMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQN 287 (355)
Q Consensus 226 Da-------------~~lDaPCSgsG~t~~~~--l--~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~EN 287 (355)
|+ ..+||||||+| +.+++ + +|+++++..+..+| ++|.+|+++|||||+|||||||++++||
T Consensus 176 D~~~~~~~~~~~fD~Il~D~PcSg~G-~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~En 254 (479)
T 2frx_A 176 DGRVFGAAVPEMFDAILLDAPCSGEG-VVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEEN 254 (479)
T ss_dssp CSTTHHHHSTTCEEEEEEECCCCCGG-GGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTT
T ss_pred CHHHhhhhccccCCEEEECCCcCCcc-cccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccC
Confidence 65 33999999999 44443 3 48899999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhccCceEEEecccccccccccccccccCCCccEEEEecCCCCCCCceEEEEEEEc
Q psy7769 288 DGVVHMSLKRIWEETGCEIEIKDLSQALRPLKSLFSFANINLSYGHLVQPHLPSNFGPMYFCKFDKI 354 (355)
Q Consensus 288 E~vV~~~L~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~P~~~~~~~gfFia~l~r~ 354 (355)
|+||+++|++++ + .+++.++...+++.... . ....+.+++||.+ +++|||+|+|+|.
T Consensus 255 e~vv~~~l~~~~---~-~~~~~~~~~~~~~~~~~--~---~~~g~~r~~P~~~-~~dGfF~A~l~k~ 311 (479)
T 2frx_A 255 EAVCLWLKETYP---D-AVEFLPLGDLFPGANKA--L---TEEGFLHVFPQIY-DCEGFFVARLRKT 311 (479)
T ss_dssp HHHHHHHHHHST---T-TEEECCCTTSSTTGGGG--B---CTTSCEEECTTTT-TSCCEEEEEEEEC
T ss_pred HHHHHHHHHHCC---C-ceecccccccccccccc--c---ccCCeEEECCCCC-CcCccEEEEEEEc
Confidence 999999999763 2 23444443222221110 0 1123478999997 6789999999985
No 7
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=7.5e-38 Score=295.75 Aligned_cols=246 Identities=22% Similarity=0.237 Sum_probs=180.6
Q ss_pred CCCcceecccCCCChhhhhhhccccccCCCCCcceeeCCCcCCCCCccceeEecCCCCcccCCCCCCCCcceeeEEEech
Q psy7769 74 GLHDFIPATQLKGMEGFITDADYMDYYRPSPEVDFKVVPETELHISPYLQAFSFPSGDISEFPSPKRGVTGVFNYYCMDG 153 (355)
Q Consensus 74 ~l~~~~rvn~lk~~~~~i~e~~~~~~~~~~~~~~~~v~~~~~~~~p~~l~~~~~~~~~~~~~p~~~~g~~~~~~~~~QD~ 153 (355)
.+|.|+|+|++|..++.+.+. +. ... +.+++ .++|+.+.+. ....++...|.+..|. |++||.
T Consensus 8 ~~~~~~rvn~~~~~~~~~~~~-----l~-~~g--~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~G~-----~~~qd~ 70 (274)
T 3ajd_A 8 EKMQFIRVNTLKINPEVLKKR-----LE-NKG--VVLEK---TFLDYAFEVK-KSPFSIGSTPEYLFGY-----YMPQSI 70 (274)
T ss_dssp -CCEEEEECTTTCCHHHHHHH-----HH-TTT--CEEEE---CSSTTEEEEE-ECSSCTTSSHHHHTTS-----EEECCS
T ss_pred CCCeEEEEeCCCCCHHHHHHH-----HH-HCC--CeecC---CCCCceEEEe-cCCCCcccChhhhCCe-----EEEeCH
Confidence 378999999999998876653 10 011 22222 4567776652 2234667788888886 999999
Q ss_pred hcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCC-CcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc---
Q psy7769 154 ASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYP-DYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG--- 227 (355)
Q Consensus 154 aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~-g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da--- 227 (355)
+|++++.++++++|++|||+|||||++|.++++.+.+ ++|+|+|+++.++ +++|+++ .+..++.+++.|+
T Consensus 71 ~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~----~g~~~v~~~~~D~~~~ 146 (274)
T 3ajd_A 71 SSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINR----MGVLNTIIINADMRKY 146 (274)
T ss_dssp GGGHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHH----TTCCSEEEEESCHHHH
T ss_pred HHHHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHH----hCCCcEEEEeCChHhc
Confidence 9999999999999999999999999999999998754 8999999999999 8888883 3555677766543
Q ss_pred -------------eeeecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHH
Q psy7769 228 -------------SVVYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHM 293 (355)
Q Consensus 228 -------------~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~ 293 (355)
..+|+||||+| +.+++-+|+++++.++...| ++|++++++|||||+|||+|||++++|||++|++
T Consensus 147 ~~~~~~~~~~fD~Vl~d~Pcs~~g-~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~ 225 (274)
T 3ajd_A 147 KDYLLKNEIFFDKILLDAPCSGNI-IKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKY 225 (274)
T ss_dssp HHHHHHTTCCEEEEEEEECCC-------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHH
T ss_pred chhhhhccccCCEEEEcCCCCCCc-ccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHH
Confidence 34999999999 44444468888888888999 9999999999999999999999999999999999
Q ss_pred HHHhhhhccCceEEEeccc-ccccccccccccccCCCccEEEEecCCCCCCCceEEEEEEEc
Q psy7769 294 SLKRIWEETGCEIEIKDLS-QALRPLKSLFSFANINLSYGHLVQPHLPSNFGPMYFCKFDKI 354 (355)
Q Consensus 294 ~L~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~g~~~~P~~~~~~~gfFia~l~r~ 354 (355)
+|+++ . +++++++. +..+++. .+.... ..+.+++||.+ + ||+|+|+|.
T Consensus 226 ~l~~~---~--~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~P~~~---~-ff~a~l~k~ 274 (274)
T 3ajd_A 226 ILQKR---N--DVELIIIKANEFKGIN---IKEGYI-KGTLRVFPPNE---P-FFIAKLRKI 274 (274)
T ss_dssp HHHHC---S--SEEEECCCSTTCTTSC---EEECSS-TTCEEECTTSC---C-EEEEEEEEC
T ss_pred HHHhC---C--CcEEecCccccccCcc---cccccC-CCeEEECCCCC---C-EEEEEEEEC
Confidence 99875 2 35555553 2122211 111111 45789999975 3 999999984
No 8
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.3e-38 Score=317.61 Aligned_cols=214 Identities=19% Similarity=0.232 Sum_probs=173.6
Q ss_pred CCCCCccceeEecCCCCcccCCCCCCCCcceeeEEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCC-CcE
Q psy7769 115 ELHISPYLQAFSFPSGDISEFPSPKRGVTGVFNYYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYP-DYY 193 (355)
Q Consensus 115 ~~~~p~~l~~~~~~~~~~~~~p~~~~g~~~~~~~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~-g~V 193 (355)
.+++|+.+.+. ..+++..+|.+..|. +++||.+|++++.++++++|++|||+|||||+||+++++.+++ ++|
T Consensus 215 ~~~~~~~~~~~--~~~~~~~~~~~~~G~-----~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v 287 (450)
T 2yxl_A 215 SERVPTILKIK--GPYNFDTSSAFNEGK-----IIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKI 287 (450)
T ss_dssp CSSCTTEEEEE--SCCCTTSCHHHHTTS-----EEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEE
T ss_pred cCccCceEEeC--CCCCcccCchhhCce-----EEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEE
Confidence 35677777663 446788889999887 9999999999999999999999999999999999999998755 899
Q ss_pred EEEcCCchhh--HHhhccccccccCcceEEEEEec--------------ceeeecccCCCCCccCCc--cc--cchHHHH
Q psy7769 194 CMDGASLLPV--LALNIRPYDTVLDIHALKLVKVG--------------GSVVYSTCSLSPIQNDGV--VH--MSLKRIW 253 (355)
Q Consensus 194 ~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~D--------------a~~lDaPCSgsG~t~~~~--l~--~~~~~l~ 253 (355)
+|+|+++.|+ +++|+++ .|..++.++..| ...+|+||||+| +.+++ ++ |+++++.
T Consensus 288 ~a~D~s~~~l~~~~~~~~~----~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g-~~~~~pd~~~~~~~~~~~ 362 (450)
T 2yxl_A 288 YAFDVDKMRMKRLKDFVKR----MGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSG-TIGKNPELRWRLREDKIN 362 (450)
T ss_dssp EEECSCHHHHHHHHHHHHH----TTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGG-GTTTSTTHHHHCCTTSHH
T ss_pred EEEcCCHHHHHHHHHHHHH----cCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCe-eeccChhhhhhCCHHHHH
Confidence 9999999999 8888883 355566666544 334999999999 44444 44 6788899
Q ss_pred hhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccCceEEEecccccccccccccccccCCCccE
Q psy7769 254 EETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKDLSQALRPLKSLFSFANINLSYG 332 (355)
Q Consensus 254 ~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g 332 (355)
.+..+| ++|.+++++|||||+|||+|||++++|||++|.++|+++ .+ ++++++...++ .+ ....+
T Consensus 363 ~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~---~~--~~~~~~~~~~~------~~---~~~~~ 428 (450)
T 2yxl_A 363 EMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVH---PE--FKLVPLKSPYD------PG---FLEGT 428 (450)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC---SS--CEECCCCSSSE------EC---SSTTC
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhC---CC--CEEeecccccc------cc---cCCCe
Confidence 999999 999999999999999999999999999999999999975 23 44444432211 11 11346
Q ss_pred EEEecCCCCCCCceEEEEEEEcC
Q psy7769 333 HLVQPHLPSNFGPMYFCKFDKIK 355 (355)
Q Consensus 333 ~~~~P~~~~~~~gfFia~l~r~~ 355 (355)
.+++||.+ +++|||+|+|+|+|
T Consensus 429 ~~~~P~~~-~~dGff~a~l~k~~ 450 (450)
T 2yxl_A 429 MRAWPHRH-STIGFFYALLEKSK 450 (450)
T ss_dssp EEECHHHH-SSCCEEEEEEECC-
T ss_pred EEECCCCC-CCCceEEEEEEECC
Confidence 78999987 67999999999975
No 9
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=1.6e-37 Score=311.29 Aligned_cols=237 Identities=16% Similarity=0.181 Sum_probs=187.1
Q ss_pred CCChhhhhhh--cccc--------ccCCCCCcceeeCCC-------------------cCCCCCccceeEecCCCCcccC
Q psy7769 85 KGMEGFITDA--DYMD--------YYRPSPEVDFKVVPE-------------------TELHISPYLQAFSFPSGDISEF 135 (355)
Q Consensus 85 k~~~~~i~e~--~~~~--------~~~~~~~~~~~v~~~-------------------~~~~~p~~l~~~~~~~~~~~~~ 135 (355)
.+.|+|+.+. +.|+ +++.++++++|||+. +.+++|+.+.+ ...+++...
T Consensus 143 ~~~p~w~~~~~~~~~g~~~~~~~~~~~~~~~~~~Rvn~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~--~~~~~~~~~ 220 (429)
T 1sqg_A 143 YLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRL--ETPAPVHAL 220 (429)
T ss_dssp GCSCHHHHHHHHHHCTTTHHHHHHHHTSCCCEEEEECTTTCCHHHHHHHHHHTTCCEECCTTCTTEEEE--SSCCCGGGS
T ss_pred hcCcHHHHHHHHHHhhHHHHHHHHhCCCCCCeEEEEcCCCCCHHHHHHHHHhCCCceeecCCCCCEEEE--CCCCCcccC
Confidence 4577887764 2232 456777788888751 12456766655 344678889
Q ss_pred CCCCCCCcceeeEEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcccccc
Q psy7769 136 PSPKRGVTGVFNYYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDT 213 (355)
Q Consensus 136 p~~~~g~~~~~~~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~ 213 (355)
|.|..|. +++||.+|++++.++++++|++|||+|||||+||+++++.++.+.|+|+|+++.|+ +++|+++
T Consensus 221 ~~~~~G~-----~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~--- 292 (429)
T 1sqg_A 221 PGFEDGW-----VTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR--- 292 (429)
T ss_dssp TTGGGTS-----EEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHH---
T ss_pred hHHhCCC-----eEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHH---
Confidence 9999887 99999999999999999999999999999999999999988668999999999999 8888883
Q ss_pred ccCcceEEEEEec--------------ceeeecccCCCCCccCCc--cc--cchHHHHhhhhHH-HHHHHHHhhccCCcE
Q psy7769 214 VLDIHALKLVKVG--------------GSVVYSTCSLSPIQNDGV--VH--MSLKRIWEETGCE-IEIKHALKLVKVGGS 274 (355)
Q Consensus 214 ~~g~~~v~~~~~D--------------a~~lDaPCSgsG~t~~~~--l~--~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~ 274 (355)
.|. ++.++..| ...+|+||||+| +.+++ ++ |++.++..+..+| ++|.+++++|||||+
T Consensus 293 -~g~-~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g-~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~ 369 (429)
T 1sqg_A 293 -LGM-KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATG-VIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGT 369 (429)
T ss_dssp -TTC-CCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGG-GTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred -cCC-CeEEEeCchhhchhhcccCCCCEEEEeCCCCccc-ccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 233 24555544 344999999999 44444 44 6788899999999 999999999999999
Q ss_pred EEEEeCCCCCCCCHHHHHHHHHhhhhccCceEEEecccccccccccccccccCCCccEEEEecCCCCCCCceEEEEEEEc
Q psy7769 275 VVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKDLSQALRPLKSLFSFANINLSYGHLVQPHLPSNFGPMYFCKFDKI 354 (355)
Q Consensus 275 lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~P~~~~~~~gfFia~l~r~ 354 (355)
|||||||++++|||.+|.++|+++ .+ +++++ . +. .. ..|.+++||.+ +++|||+|+|+|.
T Consensus 370 lvystcs~~~~ene~~v~~~l~~~---~~--~~~~~-~----~~--------~~-~~~~~~~P~~~-~~dGff~a~l~k~ 429 (429)
T 1sqg_A 370 LVYATCSVLPEENSLQIKAFLQRT---AD--AELCE-T----GT--------PE-QPGKQNLPGAE-EGDGFFYAKLIKK 429 (429)
T ss_dssp EEEEESCCCGGGTHHHHHHHHHHC---TT--CEECS-S----BC--------SS-SBSEEECCCTT-SCCSEEEEEEEC-
T ss_pred EEEEECCCChhhHHHHHHHHHHhC---CC--CEEeC-C----CC--------CC-CCeEEECCCCC-CCCceEEEEEEEC
Confidence 999999999999999999999975 23 33333 1 11 11 45789999997 7799999999984
No 10
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.52 E-value=3.2e-14 Score=131.77 Aligned_cols=123 Identities=17% Similarity=-0.030 Sum_probs=82.4
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCC
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPI 239 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~ 239 (355)
.++||++|||+|||||++|.++|+.++ .|+|+|+|+++.++ +.+..+ . ..|+.++.+|+...+..-.-.+
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~--~----r~nv~~i~~Da~~~~~~~~~~~- 145 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQ--R----RPNIFPLLADARFPQSYKSVVE- 145 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHH--H----CTTEEEEECCTTCGGGTTTTCC-
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhh--h----cCCeEEEEcccccchhhhcccc-
Confidence 388999999999999999999998764 69999999999987 444443 1 1468888888764221110000
Q ss_pred ccCCccccchHHHHhhhhHH-HHH-HHHHhhccCCcEEEEE---eC---CCCCCCCHHHHHHHHHhh
Q psy7769 240 QNDGVVHMSLKRIWEETGCE-IEI-KHALKLVKVGGSVVYS---TC---SLSPIQNDGVVHMSLKRI 298 (355)
Q Consensus 240 t~~~~l~~~~~~l~~l~~lQ-~lL-~~A~~~LkpGG~lVYs---TC---Sl~~~ENE~vV~~~L~~~ 298 (355)
. -++.+.. .. ...| ++| ..+.++|||||+++++ +| ++.++||..++.++|+++
T Consensus 146 ~--~D~I~~d--~a--~~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~ 206 (232)
T 3id6_C 146 N--VDVLYVD--IA--QPDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENS 206 (232)
T ss_dssp C--EEEEEEC--CC--CTTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHT
T ss_pred c--eEEEEec--CC--ChhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHC
Confidence 0 0100100 00 0123 444 5566699999999977 89 999999999999999864
No 11
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.48 E-value=7.7e-14 Score=138.51 Aligned_cols=131 Identities=18% Similarity=0.155 Sum_probs=97.8
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEE-
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVK- 224 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~- 224 (355)
|+.|..+..++...+ ++|.+|||+|||+|++|+++|... ..|+|+|+|+.++ +++|++ . .+..+ .+.+
T Consensus 198 f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~--~--ng~~~-~~~~~ 268 (393)
T 4dmg_A 198 YLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAAL--R--LGLRV-DIRHG 268 (393)
T ss_dssp CGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHH--H--HTCCC-EEEES
T ss_pred CCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHH--H--hCCCC-cEEEc
Confidence 666888877776554 479999999999999999999864 4599999999999 888887 2 23221 2223
Q ss_pred ------------ecceeeecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCH--H
Q psy7769 225 ------------VGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQND--G 289 (355)
Q Consensus 225 ------------~Da~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE--~ 289 (355)
+|...+|+||-.. +...+......+ +++..++++|||||.|+|+|||....+++ .
T Consensus 269 D~~~~l~~~~~~fD~Ii~dpP~f~~----------~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~ 338 (393)
T 4dmg_A 269 EALPTLRGLEGPFHHVLLDPPTLVK----------RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLE 338 (393)
T ss_dssp CHHHHHHTCCCCEEEEEECCCCCCS----------SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHH
T ss_pred cHHHHHHHhcCCCCEEEECCCcCCC----------CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHH
Confidence 3444589998221 223344444455 99999999999999999999999988877 6
Q ss_pred HHHHHHHh
Q psy7769 290 VVHMSLKR 297 (355)
Q Consensus 290 vV~~~L~~ 297 (355)
+|..++..
T Consensus 339 ~v~~a~~~ 346 (393)
T 4dmg_A 339 VARRAAAD 346 (393)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 67666654
No 12
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.35 E-value=7.9e-13 Score=130.10 Aligned_cols=138 Identities=14% Similarity=0.074 Sum_probs=98.1
Q ss_pred EEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEec
Q psy7769 149 YCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVG 226 (355)
Q Consensus 149 ~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~D 226 (355)
+.|...+.+++ .. +|.+|||+|||+|+.+.++|.. ..+|+++|+++.++ +++|++ . .+..++.++.+|
T Consensus 196 ~~~~~~~~~~~---~~-~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~--~--n~~~~~~~~~~d 265 (382)
T 1wxx_A 196 LDQRENRLYME---RF-RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENAR--L--NGLGNVRVLEAN 265 (382)
T ss_dssp GGGHHHHHHGG---GC-CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHH--H--TTCTTEEEEESC
T ss_pred cchHHHHHHHH---hc-CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHH--H--cCCCCceEEECC
Confidence 34544444433 33 7899999999999999999987 37899999999999 888887 3 355557777766
Q ss_pred ce----------------eeecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCC--
Q psy7769 227 GS----------------VVYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQN-- 287 (355)
Q Consensus 227 a~----------------~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~EN-- 287 (355)
+. .+|+|+.+.+ ...+......+ +++..++++|+|||.|+++||+.+..++
T Consensus 266 ~~~~~~~~~~~~~~fD~Ii~dpP~~~~~----------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~ 335 (382)
T 1wxx_A 266 AFDLLRRLEKEGERFDLVVLDPPAFAKG----------KKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLF 335 (382)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSCCS----------TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHhcCCCeeEEEECCCCCCCC----------hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHH
Confidence 42 3888874332 22233333444 8999999999999999999999988765
Q ss_pred HHHHHHHHHhhhhccCceEEEec
Q psy7769 288 DGVVHMSLKRIWEETGCEIEIKD 310 (355)
Q Consensus 288 E~vV~~~L~~~~~~~~~~~~~~~ 310 (355)
+.++...+.. .|..++.+.
T Consensus 336 ~~~i~~~~~~----~g~~~~~i~ 354 (382)
T 1wxx_A 336 YAMVAEAAQD----AHRLLRVVE 354 (382)
T ss_dssp HHHHHHHHHH----TTCCEEEEE
T ss_pred HHHHHHHHHH----cCCeEEEEE
Confidence 4566555443 344455443
No 13
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.33 E-value=1.7e-11 Score=110.19 Aligned_cols=121 Identities=11% Similarity=0.039 Sum_probs=92.9
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc-eEEEEEecc
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH-ALKLVKVGG 227 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~-~v~~~~~Da 227 (355)
+..-..+....+++.+|++|||+|||+|..+..++.. .++|+++|+++.++ ++++++ . .+.. ++.++.+|+
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~--~--~g~~~~v~~~~~d~ 113 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNID--T--YGLSPRMRAVQGTA 113 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH--H--TTCTTTEEEEESCT
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHH--H--cCCCCCEEEEeCch
Confidence 3444556677788999999999999999999999987 48999999999999 788887 3 3555 789999887
Q ss_pred ee-------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhh
Q psy7769 228 SV-------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRI 298 (355)
Q Consensus 228 ~~-------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~ 298 (355)
.. .|...++.+ + ..+ +++.+.+.|||||++++++|+. ++...+..++++.
T Consensus 114 ~~~~~~~~~~D~v~~~~~-------------~----~~~-~l~~~~~~LkpgG~lv~~~~~~---~~~~~~~~~l~~~ 170 (204)
T 3njr_A 114 PAALADLPLPEAVFIGGG-------------G----SQA-LYDRLWEWLAPGTRIVANAVTL---ESETLLTQLHARH 170 (204)
T ss_dssp TGGGTTSCCCSEEEECSC-------------C----CHH-HHHHHHHHSCTTCEEEEEECSH---HHHHHHHHHHHHH
T ss_pred hhhcccCCCCCEEEECCc-------------c----cHH-HHHHHHHhcCCCcEEEEEecCc---ccHHHHHHHHHhC
Confidence 54 222221111 0 222 7999999999999999999987 6777777777753
No 14
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.33 E-value=2.7e-12 Score=118.61 Aligned_cols=123 Identities=11% Similarity=0.070 Sum_probs=85.8
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEec
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVG 226 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~D 226 (355)
+...+.+...++...++.+|||+|||+|..+..+|..++ .++|+++|+++.++ ++++++ . .+. .++.+..+|
T Consensus 48 ~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~--~--~g~~~~v~~~~~d 123 (248)
T 3tfw_A 48 AANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQ--L--AGVDQRVTLREGP 123 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHH--H--TTCTTTEEEEESC
T ss_pred CHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCcEEEEEcC
Confidence 455566666666777899999999999999999998875 58999999999999 888887 3 344 368999988
Q ss_pred ceeeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 227 GSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 227 a~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
+...-+.....+ ..+. +..... .......++.+.++|||||.|++.++...
T Consensus 124 ~~~~l~~~~~~~-~fD~-V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 124 ALQSLESLGECP-AFDL-IFIDAD----KPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp HHHHHHTCCSCC-CCSE-EEECSC----GGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred HHHHHHhcCCCC-CeEE-EEECCc----hHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 754211111101 1111 100000 11122679999999999999999888765
No 15
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.32 E-value=2.6e-12 Score=126.88 Aligned_cols=132 Identities=14% Similarity=0.026 Sum_probs=96.3
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-c-eEEEE
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-H-ALKLV 223 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~-~v~~~ 223 (355)
|..|.....++..+ .+|.+|||+|||+|+.++++|... ..+|+++|+++.++ +++|++ . .+. . +++++
T Consensus 205 f~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~--~--ngl~~~~v~~~ 276 (396)
T 3c0k_A 205 YLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVE--L--NKLDLSKAEFV 276 (396)
T ss_dssp CGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHH--H--TTCCGGGEEEE
T ss_pred CcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHH--H--cCCCccceEEE
Confidence 33565665565554 578999999999999999999864 36899999999999 888887 3 344 3 67777
Q ss_pred Eecc----------------eeeecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCC-
Q psy7769 224 KVGG----------------SVVYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPI- 285 (355)
Q Consensus 224 ~~Da----------------~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~- 285 (355)
.+|+ ..+|+|+.+.+ .. .+......+ +++..++++|+|||.+++++|+.+..
T Consensus 277 ~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~---~~-------~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 346 (396)
T 3c0k_A 277 RDDVFKLLRTYRDRGEKFDVIVMDPPKFVEN---KS-------QLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTS 346 (396)
T ss_dssp ESCHHHHHHHHHHTTCCEEEEEECCSSTTTC---SS-------SSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCH
T ss_pred ECCHHHHHHHHHhcCCCCCEEEECCCCCCCC---hh-------HHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCH
Confidence 7664 23888874322 11 111112233 88999999999999999999998877
Q ss_pred -CCHHHHHHHHHh
Q psy7769 286 -QNDGVVHMSLKR 297 (355)
Q Consensus 286 -ENE~vV~~~L~~ 297 (355)
++..++...+..
T Consensus 347 ~~~~~~i~~~~~~ 359 (396)
T 3c0k_A 347 DLFQKIIADAAID 359 (396)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 667777766654
No 16
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.30 E-value=6e-12 Score=124.20 Aligned_cols=140 Identities=18% Similarity=0.100 Sum_probs=97.1
Q ss_pred EechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc-eEEEEEec
Q psy7769 150 CMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH-ALKLVKVG 226 (355)
Q Consensus 150 ~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~-~v~~~~~D 226 (355)
.|.....++..+ .++|.+|||+|||+|+.+.++|.. +.++|+++|+++.++ +++|++ . .+.. ++.++..|
T Consensus 203 ~~~~~~~~~~~~--~~~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~--~--n~~~~~v~~~~~d 275 (396)
T 2as0_A 203 DQRENRLALEKW--VQPGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAK--L--NGVEDRMKFIVGS 275 (396)
T ss_dssp TTHHHHHHHGGG--CCTTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHH--H--TTCGGGEEEEESC
T ss_pred CHHHHHHHHHHH--hhCCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHH--H--cCCCccceEEECC
Confidence 344554454433 248999999999999999999986 336899999999999 888887 3 3444 67887766
Q ss_pred ce----------------eeecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCC--
Q psy7769 227 GS----------------VVYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQN-- 287 (355)
Q Consensus 227 a~----------------~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~EN-- 287 (355)
+. .+|+|+.+.. ...+......+ +++..++++|+|||.|+|++|+.+..++
T Consensus 276 ~~~~~~~~~~~~~~fD~Vi~dpP~~~~~----------~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~ 345 (396)
T 2as0_A 276 AFEEMEKLQKKGEKFDIVVLDPPAFVQH----------EKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMF 345 (396)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSCSS----------GGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHH
T ss_pred HHHHHHHHHhhCCCCCEEEECCCCCCCC----------HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHH
Confidence 42 2777763321 22233333334 8999999999999999999999876653
Q ss_pred HHHHHHHHHhhhhccCceEEEec
Q psy7769 288 DGVVHMSLKRIWEETGCEIEIKD 310 (355)
Q Consensus 288 E~vV~~~L~~~~~~~~~~~~~~~ 310 (355)
+.++...... .+..+..+.
T Consensus 346 ~~~v~~~~~~----~~~~~~~i~ 364 (396)
T 2as0_A 346 KDMIIAAGAK----AGKFLKMLE 364 (396)
T ss_dssp HHHHHHHHHH----TTEEEEESS
T ss_pred HHHHHHHHHH----cCCeEEEEe
Confidence 4555544432 344555544
No 17
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.29 E-value=2.5e-13 Score=134.19 Aligned_cols=174 Identities=16% Similarity=0.041 Sum_probs=107.4
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcccccc-----------ccCc
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDT-----------VLDI 217 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~-----------~~g~ 217 (355)
|.....+...++...+|.+|||+|||+|.+++++|...+..+|+++|+++.++ +++|+++... ..+.
T Consensus 32 ~~~nr~l~~~~l~~~~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl 111 (378)
T 2dul_A 32 MALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE 111 (378)
T ss_dssp GHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS
T ss_pred hHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC
Confidence 44445454333333378999999999999999999886556899999999999 8899883100 0044
Q ss_pred ceEEEEEecce-------------eeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 218 HALKLVKVGGS-------------VVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 218 ~~v~~~~~Da~-------------~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
.++++++.|+. .+||||+. ..+|..|++.||+|| ++|.||+-..
T Consensus 112 ~~i~v~~~Da~~~~~~~~~~fD~I~lDP~~~~----------------------~~~l~~a~~~lk~gG-~l~vt~td~~ 168 (378)
T 2dul_A 112 KTIVINHDDANRLMAERHRYFHFIDLDPFGSP----------------------MEFLDTALRSAKRRG-ILGVTATDGA 168 (378)
T ss_dssp SEEEEEESCHHHHHHHSTTCEEEEEECCSSCC----------------------HHHHHHHHHHEEEEE-EEEEEECCHH
T ss_pred CceEEEcCcHHHHHHhccCCCCEEEeCCCCCH----------------------HHHHHHHHHhcCCCC-EEEEEeecch
Confidence 55888877752 27777631 157899999999999 7889998655
Q ss_pred CCCHHHHHHHHHhhhhccCceEEEecccccc-ccccccc-ccccCCCccEEEEecCCCCCCCceEEEEEEEc
Q psy7769 285 IQNDGVVHMSLKRIWEETGCEIEIKDLSQAL-RPLKSLF-SFANINLSYGHLVQPHLPSNFGPMYFCKFDKI 354 (355)
Q Consensus 285 ~ENE~vV~~~L~~~~~~~~~~~~~~~l~~~~-~~~~~~~-~~~~~~~~~g~~~~P~~~~~~~gfFia~l~r~ 354 (355)
..+.......+.++ |.. +....... .++.-.. .......++|..+.|... ..+|||+++++|.
T Consensus 169 ~l~~~~~~~~~~~y----g~~--p~~~~~~~e~~~ri~l~~~~~~~~~~g~~i~P~~~-~~~~~y~rv~vrv 233 (378)
T 2dul_A 169 PLCGAHPRACLRKY----LAV--PLRGELCHEVGTRILVGVIARYAAKYDLGIDVILA-YYKDHYFRAFVKL 233 (378)
T ss_dssp HHTTSSHHHHHHHH----SSB--CCCSTTHHHHHHHHHHHHHHHHHHTTTEEEEEEEE-EEETTEEEEEEEE
T ss_pred hhccccHHHHHHHc----cCC--CcccccccchhHHHHHHHHHHhcCcCCcEEEEEEE-EecCCEEEEEEEE
Confidence 33333344444432 211 11111000 0000000 000001246778888653 4468999999874
No 18
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.27 E-value=6.8e-12 Score=112.86 Aligned_cols=122 Identities=12% Similarity=0.004 Sum_probs=83.5
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEec
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVG 226 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~D 226 (355)
+.....+...++...++.+|||+|||+|..+.++++.++ .++|+++|+++.++ +++++. . .+. +++.++.+|
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~v~~~~~d 118 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIE--R--ANLNDRVEVRTGL 118 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHH--H--TTCTTTEEEEESC
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCcEEEEEcC
Confidence 455566666666777889999999999999999998875 58999999999999 888887 3 344 348888888
Q ss_pred ceeeecc--cCCCCCccCCcccc-chHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 227 GSVVYST--CSLSPIQNDGVVHM-SLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 227 a~~lDaP--CSgsG~t~~~~l~~-~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
+...-+. -.+.+ . -++.+ ... ......+++.+.++|||||.|++..+...
T Consensus 119 ~~~~~~~~~~~~~~-~--fD~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 119 ALDSLQQIENEKYE-P--FDFIFIDAD----KQNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp HHHHHHHHHHTTCC-C--CSEEEECSC----GGGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred HHHHHHHHHhcCCC-C--cCEEEEcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 7431110 00000 0 11111 000 01122789999999999999998876654
No 19
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.27 E-value=2.3e-11 Score=108.09 Aligned_cols=135 Identities=12% Similarity=0.027 Sum_probs=99.4
Q ss_pred EechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc
Q psy7769 150 CMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG 227 (355)
Q Consensus 150 ~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da 227 (355)
.++....+....+.+++|++|||+|||+|..+..++...+.++|+++|+++.++ ++++++ . .+..++.++..|+
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~--~--~~~~~v~~~~~d~ 99 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLK--K--FVARNVTLVEAFA 99 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHH--H--HTCTTEEEEECCT
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH--H--hCCCcEEEEeCCh
Confidence 345555667777889999999999999999999999987668999999999999 888887 3 3456788988887
Q ss_pred ee-------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhh
Q psy7769 228 SV-------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWE 300 (355)
Q Consensus 228 ~~-------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~ 300 (355)
.. .|.-.+..+ . ....++++.+.++|||||++++++++. ++...+...+++
T Consensus 100 ~~~~~~~~~~D~i~~~~~----------~------~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l~~--- 157 (204)
T 3e05_A 100 PEGLDDLPDPDRVFIGGS----------G------GMLEEIIDAVDRRLKSEGVIVLNAVTL---DTLTKAVEFLED--- 157 (204)
T ss_dssp TTTCTTSCCCSEEEESCC----------T------TCHHHHHHHHHHHCCTTCEEEEEECBH---HHHHHHHHHHHH---
T ss_pred hhhhhcCCCCCEEEECCC----------C------cCHHHHHHHHHHhcCCCeEEEEEeccc---ccHHHHHHHHHH---
Confidence 42 222221111 0 023378999999999999999998887 566666677765
Q ss_pred ccCceEEEecc
Q psy7769 301 ETGCEIEIKDL 311 (355)
Q Consensus 301 ~~~~~~~~~~l 311 (355)
.|++++...+
T Consensus 158 -~g~~~~~~~~ 167 (204)
T 3e05_A 158 -HGYMVEVACV 167 (204)
T ss_dssp -TTCEEEEEEE
T ss_pred -CCCceeEEEE
Confidence 3545554443
No 20
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.19 E-value=8.9e-11 Score=108.73 Aligned_cols=133 Identities=11% Similarity=0.063 Sum_probs=87.4
Q ss_pred cHHHHHhhCCC-CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEeccee-
Q psy7769 155 SLLPVLALNIR-PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSV- 229 (355)
Q Consensus 155 S~l~~~~L~~~-pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~- 229 (355)
+.+.+..+.++ ++.+|||+|||+|..+..+++... +.|+|+|+++.++ +++|+. . .+. .++.+++.|...
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~--~--~~~~~~v~~~~~D~~~~ 111 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVA--Y--NQLEDQIEIIEYDLKKI 111 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHH--H--TTCTTTEEEECSCGGGG
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHH--H--CCCcccEEEEECcHHHh
Confidence 77888888888 999999999999999999998753 4999999999999 788887 3 233 357777766532
Q ss_pred -------------eecccCCC---CCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHH
Q psy7769 230 -------------VYSTCSLS---PIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHM 293 (355)
Q Consensus 230 -------------lDaPCSgs---G~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~ 293 (355)
+++|+... |... ..-.....+......+..+++.+.++|||||++++.. +.++...+..
T Consensus 112 ~~~~~~~~fD~Ii~npPy~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~----~~~~~~~~~~ 186 (259)
T 3lpm_A 112 TDLIPKERADIVTCNPPYFATPDTSLKN-TNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH----RPERLLDIID 186 (259)
T ss_dssp GGTSCTTCEEEEEECCCC------------------------HHHHHHHHHHHHHEEEEEEEEEEE----CTTTHHHHHH
T ss_pred hhhhccCCccEEEECCCCCCCccccCCC-CchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE----cHHHHHHHHH
Confidence 66666433 2100 0000000111111223389999999999999999943 3455555666
Q ss_pred HHHh
Q psy7769 294 SLKR 297 (355)
Q Consensus 294 ~L~~ 297 (355)
.+.+
T Consensus 187 ~l~~ 190 (259)
T 3lpm_A 187 IMRK 190 (259)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 21
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.19 E-value=2.8e-11 Score=128.32 Aligned_cols=129 Identities=12% Similarity=0.034 Sum_probs=92.2
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc--eEEEE
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH--ALKLV 223 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~--~v~~~ 223 (355)
|+-|.....++.... +|.+|||+|||+|+.+++++... ..+|+++|+|+.++ +++|++ . .+.. +++++
T Consensus 524 f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~--~--ngl~~~~v~~i 595 (703)
T 3v97_A 524 FLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLR--L--NGLTGRAHRLI 595 (703)
T ss_dssp CGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHH--H--TTCCSTTEEEE
T ss_pred cccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHH--H--cCCCccceEEE
Confidence 445777777766543 68999999999999999998743 35799999999999 888987 3 3443 68888
Q ss_pred Eecce-------------eeecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHH
Q psy7769 224 KVGGS-------------VVYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDG 289 (355)
Q Consensus 224 ~~Da~-------------~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~ 289 (355)
++|+. .+|+||.+.+. . ..........+ +++..+.++|+|||+|++|+|+-....++.
T Consensus 596 ~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~---~-----~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~ 667 (703)
T 3v97_A 596 QADCLAWLREANEQFDLIFIDPPTFSNSK---R-----MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLD 667 (703)
T ss_dssp ESCHHHHHHHCCCCEEEEEECCCSBC---------------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHH
T ss_pred ecCHHHHHHhcCCCccEEEECCccccCCc---c-----chhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHH
Confidence 76653 39999844320 0 00111122233 899999999999999999999977777754
Q ss_pred HHH
Q psy7769 290 VVH 292 (355)
Q Consensus 290 vV~ 292 (355)
..+
T Consensus 668 ~l~ 670 (703)
T 3v97_A 668 GLA 670 (703)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 22
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.19 E-value=6.2e-11 Score=109.79 Aligned_cols=114 Identities=13% Similarity=0.042 Sum_probs=75.5
Q ss_pred cHHHHHh------hCCCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEe
Q psy7769 155 SLLPVLA------LNIRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKV 225 (355)
Q Consensus 155 S~l~~~~------L~~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~ 225 (355)
|-|++.+ |.++||++|||+|||+|..+.++|... ..|+|+|+|+++.++ ++++++ . ..|+..+..
T Consensus 60 sklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~--~----~~ni~~V~~ 133 (233)
T 4df3_A 60 SKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVR--D----RRNIFPILG 133 (233)
T ss_dssp CHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHST--T----CTTEEEEES
T ss_pred hHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhH--h----hcCeeEEEE
Confidence 4455544 458999999999999999999999986 459999999999999 777776 2 246777777
Q ss_pred cceeeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEe
Q psy7769 226 GGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 226 Da~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsT 279 (355)
|....+.+--..+ .-++.+. .+..-...+.++.++.++|||||+++.+.
T Consensus 134 d~~~p~~~~~~~~---~vDvVf~--d~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 134 DARFPEKYRHLVE---GVDGLYA--DVAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp CTTCGGGGTTTCC---CEEEEEE--CCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eccCccccccccc---eEEEEEE--eccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 7654111100000 0000000 00000011167999999999999999874
No 23
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.17 E-value=6e-11 Score=111.66 Aligned_cols=114 Identities=18% Similarity=0.108 Sum_probs=84.3
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc-eEEEEEeccee-----------
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH-ALKLVKVGGSV----------- 229 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~-~v~~~~~Da~~----------- 229 (355)
+++|++|||+|||+|+.+..+|..... +|+|+|+++.++ +++|++ . .+.. +++++++|+..
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~--~--n~~~~~v~~~~~D~~~~~~~~~fD~Vi 197 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIH--L--NKVEDRMSAYNMDNRDFPGENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHH--H--TTCTTTEEEECSCTTTCCCCSCEEEEE
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHH--H--cCCCceEEEEECCHHHhcccCCccEEE
Confidence 568999999999999999999988643 799999999999 888887 3 3443 47888888753
Q ss_pred eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC---CCCCHHHHHHHHHhhhhccCceE
Q psy7769 230 VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS---PIQNDGVVHMSLKRIWEETGCEI 306 (355)
Q Consensus 230 lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~---~~ENE~vV~~~L~~~~~~~~~~~ 306 (355)
+|+|+ .. .+++..++++|||||.+++++|+-. ..+....+..++++ .|+++
T Consensus 198 ~~~p~-------------~~---------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~----~G~~~ 251 (278)
T 2frn_A 198 MGYVV-------------RT---------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKE----YGYDV 251 (278)
T ss_dssp ECCCS-------------SG---------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHH----TTCEE
T ss_pred ECCch-------------hH---------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHH----cCCee
Confidence 33332 00 1568899999999999999999853 34445555555554 46565
Q ss_pred EE
Q psy7769 307 EI 308 (355)
Q Consensus 307 ~~ 308 (355)
+.
T Consensus 252 ~~ 253 (278)
T 2frn_A 252 EK 253 (278)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 24
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.16 E-value=4.3e-11 Score=104.37 Aligned_cols=112 Identities=13% Similarity=0.063 Sum_probs=74.0
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee--------eec
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV--------VYS 232 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~--------lDa 232 (355)
.+++|++|||+|||+|..+..++.. .++|+|+|+++.++ ++++++ . .+..++.++..|... +|.
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~--~--~~~~~v~~~~~~~~~l~~~~~~~fD~ 92 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLS--D--LGIENTELILDGHENLDHYVREPIRA 92 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHH--H--HTCCCEEEEESCGGGGGGTCCSCEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHH--H--cCCCcEEEEeCcHHHHHhhccCCcCE
Confidence 4678999999999999999999987 48999999999999 888887 3 344678888755433 343
Q ss_pred ccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCC
Q psy7769 233 TCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPI 285 (355)
Q Consensus 233 PCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ 285 (355)
.++..|. +......+......+ .+|+.+.++|||||+++.+.++-++.
T Consensus 93 v~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 141 (185)
T 3mti_A 93 AIFNLGY-----LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDG 141 (185)
T ss_dssp EEEEEC----------------CHHHHHHHHHHHHHHEEEEEEEEEEEC-----
T ss_pred EEEeCCC-----CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCC
Confidence 3322221 001111111122223 78999999999999999988875543
No 25
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.15 E-value=7.1e-11 Score=106.58 Aligned_cols=139 Identities=6% Similarity=-0.089 Sum_probs=89.4
Q ss_pred EechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEe
Q psy7769 150 CMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKV 225 (355)
Q Consensus 150 ~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~ 225 (355)
+++..+.+...++...++.+|||+|||+|..|.++|+.++ .++|+++|+++.++ ++++++ . .+. ++++++.+
T Consensus 42 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~v~~~~~ 117 (221)
T 3u81_A 42 VGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLN--F--AGLQDKVTILNG 117 (221)
T ss_dssp CCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH--H--HTCGGGEEEEES
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHH--H--cCCCCceEEEEC
Confidence 3556667777777777889999999999999999998764 58999999999999 888887 3 344 46899999
Q ss_pred cceeeecccCC-CCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 226 GGSVVYSTCSL-SPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 226 Da~~lDaPCSg-sG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
|+...-+.... .+ ...-++.+............+++..+ ++|||||+||+.+|... +...+..++..
T Consensus 118 d~~~~l~~~~~~~~-~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~---~~~~~~~~l~~ 185 (221)
T 3u81_A 118 ASQDLIPQLKKKYD-VDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVP---GTPDFLAYVRG 185 (221)
T ss_dssp CHHHHGGGTTTTSC-CCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCC---CCHHHHHHHHH
T ss_pred CHHHHHHHHHHhcC-CCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCc---chHHHHHHHhh
Confidence 87442111100 00 00111111000001111111566666 99999999999999863 33444455544
No 26
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.13 E-value=6.2e-11 Score=106.75 Aligned_cols=130 Identities=15% Similarity=0.082 Sum_probs=83.8
Q ss_pred EEEechhcH-HHHHhh--CCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhcccccc-ccCcceE
Q psy7769 148 YYCMDGASL-LPVLAL--NIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDT-VLDIHAL 220 (355)
Q Consensus 148 ~~~QD~aS~-l~~~~L--~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~-~~g~~~v 220 (355)
.+++++... ....++ .+++|++|||+|||+|.++.++++.++ .++|+++|+++.++ +++++.+... ..+..++
T Consensus 56 ~~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v 135 (226)
T 1i1n_A 56 ATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRV 135 (226)
T ss_dssp EEECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSE
T ss_pred ceecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcE
Confidence 556665522 223344 378999999999999999999998863 47999999999999 7777762100 0013468
Q ss_pred EEEEecceeeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHH
Q psy7769 221 KLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDG 289 (355)
Q Consensus 221 ~~~~~Da~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~ 289 (355)
.+...|+.....+- + ..+. +... ..+..+++++.+.|||||++++++|+...+++..
T Consensus 136 ~~~~~d~~~~~~~~---~-~fD~-i~~~-------~~~~~~~~~~~~~LkpgG~lv~~~~~~~~~~~~~ 192 (226)
T 1i1n_A 136 QLVVGDGRMGYAEE---A-PYDA-IHVG-------AAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLE 192 (226)
T ss_dssp EEEESCGGGCCGGG---C-CEEE-EEEC-------SBBSSCCHHHHHTEEEEEEEEEEESCTTSCEEEE
T ss_pred EEEECCcccCcccC---C-CcCE-EEEC-------CchHHHHHHHHHhcCCCcEEEEEEecCCCceEEE
Confidence 88888864211100 0 0000 0000 0001346788899999999999999987666643
No 27
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.13 E-value=1.6e-10 Score=106.70 Aligned_cols=123 Identities=14% Similarity=-0.034 Sum_probs=84.0
Q ss_pred EechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEe
Q psy7769 150 CMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKV 225 (355)
Q Consensus 150 ~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~ 225 (355)
++.....+...++...++.+|||+|||+|..|..+|..++ .++|+++|+++.++ ++++++ . .+. .+++++.+
T Consensus 44 i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~--~--~g~~~~i~~~~g 119 (242)
T 3r3h_A 44 VAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWR--E--AKQEHKIKLRLG 119 (242)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHH--H--TTCTTTEEEEES
T ss_pred cCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCcEEEEEc
Confidence 4556666777777777788999999999999999999775 58999999999999 888887 3 344 47899988
Q ss_pred cceeeecccC--C-CCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 226 GGSVVYSTCS--L-SPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 226 Da~~lDaPCS--g-sG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
|+..+.+... + .+ +. ++.+.... .......++.++++|||||.|++..+.+
T Consensus 120 da~~~l~~~~~~~~~~-~f--D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 120 PALDTLHSLLNEGGEH-QF--DFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp CHHHHHHHHHHHHCSS-CE--EEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred CHHHHHHHHhhccCCC-CE--eEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 8753211100 0 00 00 11110000 0112267999999999999999876554
No 28
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.13 E-value=6.4e-10 Score=95.60 Aligned_cols=119 Identities=17% Similarity=0.143 Sum_probs=88.0
Q ss_pred cHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc-eEEEEEeccee--
Q psy7769 155 SLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH-ALKLVKVGGSV-- 229 (355)
Q Consensus 155 S~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~-~v~~~~~Da~~-- 229 (355)
.......+.+.+|++|||+|||+|..+..++...+.++|+++|+++.++ +++++. . .+.. ++ ++..|+..
T Consensus 14 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~~-~~~~d~~~~~ 88 (178)
T 3hm2_A 14 RALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAI--N--LGVSDRI-AVQQGAPRAF 88 (178)
T ss_dssp HHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHH--T--TTCTTSE-EEECCTTGGG
T ss_pred HHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHH--H--hCCCCCE-EEecchHhhh
Confidence 3455566788999999999999999999999876568999999999999 788877 3 3444 67 77777632
Q ss_pred ------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhh
Q psy7769 230 ------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRI 298 (355)
Q Consensus 230 ------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~ 298 (355)
+|.-.+..+ +.+ ..+++.+.++|||||++++++++. ++...+..+++++
T Consensus 89 ~~~~~~~D~i~~~~~------~~~-----------~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 89 DDVPDNPDVIFIGGG------LTA-----------PGVFAAAWKRLPVGGRLVANAVTV---ESEQMLWALRKQF 143 (178)
T ss_dssp GGCCSCCSEEEECC-------TTC-----------TTHHHHHHHTCCTTCEEEEEECSH---HHHHHHHHHHHHH
T ss_pred hccCCCCCEEEECCc------ccH-----------HHHHHHHHHhcCCCCEEEEEeecc---ccHHHHHHHHHHc
Confidence 222221111 001 267999999999999999999887 6666777777654
No 29
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.10 E-value=1.6e-10 Score=113.98 Aligned_cols=117 Identities=9% Similarity=0.006 Sum_probs=83.3
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc--eEEEEEec
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH--ALKLVKVG 226 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~--~v~~~~~D 226 (355)
|.....+....+ .+|.+|||+|||+|+.++++|... ..+|+++|+++.++ +++|++ . .+.. +++++.+|
T Consensus 199 ~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~--~--n~~~~~~v~~~~~D 271 (385)
T 2b78_A 199 QRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFE--A--NHLDMANHQLVVMD 271 (385)
T ss_dssp GHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHH--H--TTCCCTTEEEEESC
T ss_pred HHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHH--H--cCCCccceEEEECC
Confidence 444445555444 678999999999999999999753 25899999999999 888887 3 3443 68887766
Q ss_pred c----------------eeeecccCCCCCccCCccccchHHHHhhhh-HHHHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 227 G----------------SVVYSTCSLSPIQNDGVVHMSLKRIWEETG-CEIEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 227 a----------------~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~-lQ~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
+ ..+|||+.+.+ .+ ....... +.+++..+.++|+|||.|++++|+-..
T Consensus 272 ~~~~l~~~~~~~~~fD~Ii~DPP~~~~~---~~-------~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~ 336 (385)
T 2b78_A 272 VFDYFKYARRHHLTYDIIIIDPPSFARN---KK-------EVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM 336 (385)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCC---------------CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHhCCCccEEEECCCCCCCC---hh-------hHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC
Confidence 4 23888884321 00 0111111 227899999999999999999998775
No 30
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.10 E-value=1.2e-10 Score=112.85 Aligned_cols=141 Identities=10% Similarity=-0.087 Sum_probs=93.7
Q ss_pred echhcHHHHHhhC-CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc--eEEEEEe
Q psy7769 151 MDGASLLPVLALN-IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH--ALKLVKV 225 (355)
Q Consensus 151 QD~aS~l~~~~L~-~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~--~v~~~~~ 225 (355)
|.....++...+. ..+|.+|||+|||+|+.+..++... .+|+++|+|+.++ +++|++ . .+.. ++.+++.
T Consensus 137 q~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~--~--~gl~~~~v~~i~~ 210 (332)
T 2igt_A 137 QIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQV--L--AGLEQAPIRWICE 210 (332)
T ss_dssp GHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHH--H--HTCTTSCEEEECS
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHH--H--cCCCccceEEEEC
Confidence 4444444555553 4578899999999999999999864 4999999999999 888887 3 2333 3666655
Q ss_pred c----------------ceeeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcE-EEEEeCCCCCCCCH
Q psy7769 226 G----------------GSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGS-VVYSTCSLSPIQND 288 (355)
Q Consensus 226 D----------------a~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~-lVYsTCSl~~~ENE 288 (355)
| ...+|+||.+.+- ....|. ......+++..+.++|+|||. ++.++|+. ..++
T Consensus 211 D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~---~~~~~~-----~~~~~~~ll~~~~~~LkpgG~lli~~~~~~--~~~~ 280 (332)
T 2igt_A 211 DAMKFIQREERRGSTYDIILTDPPKFGRGT---HGEVWQ-----LFDHLPLMLDICREILSPKALGLVLTAYSI--RASF 280 (332)
T ss_dssp CHHHHHHHHHHHTCCBSEEEECCCSEEECT---TCCEEE-----HHHHHHHHHHHHHHTBCTTCCEEEEEECCT--TSCH
T ss_pred cHHHHHHHHHhcCCCceEEEECCccccCCc---hHHHHH-----HHHHHHHHHHHHHHhcCcCcEEEEEECCCC--CCCH
Confidence 4 3348888844330 000011 111222889999999999998 44455654 4566
Q ss_pred HHHHHHHHhhhhccCceEE
Q psy7769 289 GVVHMSLKRIWEETGCEIE 307 (355)
Q Consensus 289 ~vV~~~L~~~~~~~~~~~~ 307 (355)
.....++++...+.|..++
T Consensus 281 ~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 281 YSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp HHHHHHHHHHTTTSCSEEE
T ss_pred HHHHHHHHHHHHHcCCeEE
Confidence 7777777765445565555
No 31
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.10 E-value=1.8e-10 Score=104.43 Aligned_cols=125 Identities=11% Similarity=-0.015 Sum_probs=87.0
Q ss_pred EEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEe
Q psy7769 149 YCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKV 225 (355)
Q Consensus 149 ~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~ 225 (355)
++|...+.+...++.+.++.+|||+|||+|..+..++...+.++|+++|+++.++ +++++. . .+. .++.+...
T Consensus 37 ~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~v~~~~~ 112 (233)
T 2gpy_A 37 IMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVK--A--LGLESRIELLFG 112 (233)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHH--H--TTCTTTEEEECS
T ss_pred CcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCcEEEEEC
Confidence 4577777888888888899999999999999999999987668999999999999 788877 3 344 35788887
Q ss_pred cceeeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 226 GGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 226 Da~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
|+....+.....+ . -++.+.... ......+++.+.++|+|||+++++++.+.
T Consensus 113 d~~~~~~~~~~~~-~--fD~I~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 164 (233)
T 2gpy_A 113 DALQLGEKLELYP-L--FDVLFIDAA---KGQYRRFFDMYSPMVRPGGLILSDNVLFR 164 (233)
T ss_dssp CGGGSHHHHTTSC-C--EEEEEEEGG---GSCHHHHHHHHGGGEEEEEEEEEETTTC-
T ss_pred CHHHHHHhcccCC-C--ccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEEcCCcC
Confidence 7643111100000 0 011111000 01223789999999999999999976543
No 32
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.09 E-value=3e-10 Score=110.20 Aligned_cols=131 Identities=15% Similarity=0.036 Sum_probs=89.5
Q ss_pred HHHHHhhCCCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeec
Q psy7769 156 LLPVLALNIRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYS 232 (355)
Q Consensus 156 ~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDa 232 (355)
...+.++.++++..|||+|||+|..+..+|... ....|+++|+++.++ +++|++ . .+..++.+.+.|+..+..
T Consensus 193 ~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~--~--~g~~~i~~~~~D~~~~~~ 268 (354)
T 3tma_A 193 QALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAAL--A--SGLSWIRFLRADARHLPR 268 (354)
T ss_dssp HHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHH--H--TTCTTCEEEECCGGGGGG
T ss_pred HHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHH--H--cCCCceEEEeCChhhCcc
Confidence 334555678899999999999999999999887 568999999999999 888888 3 344467888877654222
Q ss_pred ccCCCCC-ccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHH
Q psy7769 233 TCSLSPI-QNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLK 296 (355)
Q Consensus 233 PCSgsG~-t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~ 296 (355)
+....++ ..+....+..........++ .+++.+.++|||||++++.|| |+..++.+++
T Consensus 269 ~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~------~~~~~~~~~~ 328 (354)
T 3tma_A 269 FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL------RPALLKRALP 328 (354)
T ss_dssp TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES------CHHHHHHHCC
T ss_pred ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC------CHHHHHHHhh
Confidence 2211110 00000001111123344555 899999999999999999998 4566666554
No 33
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.06 E-value=3.9e-10 Score=100.54 Aligned_cols=109 Identities=16% Similarity=0.160 Sum_probs=74.0
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhhHHhhccccccccCcceEEEEE-------------------
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPVLALNIRPYDTVLDIHALKLVK------------------- 224 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rll~~~l~r~~~~~g~~~v~~~~------------------- 224 (355)
+++|++|||+|||||++|..+++. .++|+|+|+++...+ .++.+++
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~~~-------------~~v~~~~~D~~~~~~~~~~~~~~~~~ 87 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEMEEI-------------AGVRFIRCDIFKETIFDDIDRALREE 87 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCCCC-------------TTCEEEECCTTSSSHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccccC-------------CCeEEEEccccCHHHHHHHHHHhhcc
Confidence 578999999999999999999987 589999999984220 1122222
Q ss_pred ----ecceeeecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhh
Q psy7769 225 ----VGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRI 298 (355)
Q Consensus 225 ----~Da~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~ 298 (355)
.|....|+++..+|. |..+.. ....++ .+|..|.++|||||++|..+ ...++...+.+.++..
T Consensus 88 ~~~~~D~Vlsd~~~~~~g~-------~~~d~~-~~~~l~~~~l~~a~~~LkpGG~lv~k~---~~~~~~~~~~~~l~~~ 155 (191)
T 3dou_A 88 GIEKVDDVVSDAMAKVSGI-------PSRDHA-VSYQIGQRVMEIAVRYLRNGGNVLLKQ---FQGDMTNDFIAIWRKN 155 (191)
T ss_dssp TCSSEEEEEECCCCCCCSC-------HHHHHH-HHHHHHHHHHHHHHHHEEEEEEEEEEE---ECSTHHHHHHHHHGGG
T ss_pred cCCcceEEecCCCcCCCCC-------cccCHH-HHHHHHHHHHHHHHHHccCCCEEEEEE---cCCCCHHHHHHHHHHh
Confidence 344445666655552 222222 222344 88999999999999999554 4456666777777654
No 34
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.04 E-value=3.2e-10 Score=106.45 Aligned_cols=132 Identities=17% Similarity=0.080 Sum_probs=84.8
Q ss_pred hhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCC
Q psy7769 161 ALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSP 238 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG 238 (355)
+..+.+|++|||+|||+|..+..+|.....++|+|+|+++.++ +++|++ . .+..++.++.+|+..+ +. .+
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~--~--n~l~~~~~~~~d~~~~-~~---~~ 185 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIK--L--NKLNNVIPILADNRDV-EL---KD 185 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHH--H--TTCSSEEEEESCGGGC-CC---TT
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH--H--cCCCCEEEEECChHHc-Cc---cC
Confidence 4457889999999999999999999986567999999999999 888887 3 3556788988887643 11 00
Q ss_pred CccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccCceEEE
Q psy7769 239 IQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEI 308 (355)
Q Consensus 239 ~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~ 308 (355)
..+. +...+-. ...+++..+++.|+|||.+++ +|.....+.++.....++...+..+..++.
T Consensus 186 -~~D~-Vi~d~p~-----~~~~~l~~~~~~LkpgG~l~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (272)
T 3a27_A 186 -VADR-VIMGYVH-----KTHKFLDKTFEFLKDRGVIHY-HETVAEKIMYERPIERLKFYAEKNGYKLID 247 (272)
T ss_dssp -CEEE-EEECCCS-----SGGGGHHHHHHHEEEEEEEEE-EEEEEGGGTTTHHHHHHHHHHHHTTEEEEE
T ss_pred -CceE-EEECCcc-----cHHHHHHHHHHHcCCCCEEEE-EEcCccccccccHHHHHHHHHHHhCCeeEE
Confidence 0010 1111100 112678899999999988774 555544433333333333322223434443
No 35
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.02 E-value=3.4e-10 Score=105.76 Aligned_cols=119 Identities=10% Similarity=0.038 Sum_probs=77.1
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh--HHhhcccccccc-CcceEEEE
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV--LALNIRPYDTVL-DIHALKLV 223 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl--l~~~l~r~~~~~-g~~~v~~~ 223 (355)
..+++..+.+++..+++.+|++|||+|||+|..+.++++.. +.++|+++|+++.++ ++++++ . . +..++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~--~--~~g~~~v~~~ 167 (275)
T 1yb2_A 92 QIISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLS--E--FYDIGNVRTS 167 (275)
T ss_dssp --------------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHH--T--TSCCTTEEEE
T ss_pred cccChhhHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHH--h--cCCCCcEEEE
Confidence 34566667788888899999999999999999999999874 448999999999999 888887 3 3 45678888
Q ss_pred EecceeeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 224 KVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 224 ~~Da~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
..|+.. +... + . -++.+. ......++|+++.++|||||++++++|+.
T Consensus 168 ~~d~~~---~~~~-~-~--fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 168 RSDIAD---FISD-Q-M--YDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp CSCTTT---CCCS-C-C--EEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred ECchhc---cCcC-C-C--ccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 888643 1100 0 0 010000 00011167999999999999999999876
No 36
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.01 E-value=4.8e-10 Score=102.17 Aligned_cols=121 Identities=10% Similarity=-0.002 Sum_probs=87.4
Q ss_pred EechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc
Q psy7769 150 CMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG 227 (355)
Q Consensus 150 ~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da 227 (355)
-|++++...+..+++.++.+|||+|||+|..+..++... ..|+++|+++.++ +++++. . .+..++.+...|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--~--~~~~~v~~~~~d~ 78 (239)
T 1xxl_A 5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQ--E--KGVENVRFQQGTA 78 (239)
T ss_dssp -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHH--H--HTCCSEEEEECBT
T ss_pred ccCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHH--H--cCCCCeEEEeccc
Confidence 378899999999999999999999999999999988775 5999999999999 777776 3 3445788888887
Q ss_pred eeeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 228 SVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 228 ~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
..++.+- + + -++.+....+........+|.++.++|||||+++.++...
T Consensus 79 ~~~~~~~---~-~--fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 79 ESLPFPD---D-S--FDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp TBCCSCT---T-C--EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred ccCCCCC---C-c--EEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 5432211 0 0 0111111111122233378999999999999999986654
No 37
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.01 E-value=9.8e-10 Score=102.59 Aligned_cols=137 Identities=13% Similarity=-0.006 Sum_probs=90.7
Q ss_pred hhcHHHHHhhCC--CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 153 GASLLPVLALNI--RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 153 ~aS~l~~~~L~~--~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
....++..+++. .++.+|||+|||+|..+..++...+..+|+|+|+|+.++ +++|++ . .+..++.+...|..
T Consensus 94 ~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~--~--~~~~~v~~~~~d~~ 169 (276)
T 2b3t_A 94 DTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQ--H--LAIKNIHILQSDWF 169 (276)
T ss_dssp THHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHH--H--HTCCSEEEECCSTT
T ss_pred hHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCceEEEEcchh
Confidence 344455444432 578899999999999999999877668999999999999 888887 3 34446777766643
Q ss_pred -----------eeecccCCCCCcc-CCc-cccchHH-----HHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHH
Q psy7769 229 -----------VVYSTCSLSPIQN-DGV-VHMSLKR-----IWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGV 290 (355)
Q Consensus 229 -----------~lDaPCSgsG~t~-~~~-l~~~~~~-----l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~v 290 (355)
..++||.+.+... ... +.+.|.. ...+.....++..+.++|||||.+++.++. .+...
T Consensus 170 ~~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~ 245 (276)
T 2b3t_A 170 SALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW----QQGEA 245 (276)
T ss_dssp GGGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS----SCHHH
T ss_pred hhcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc----hHHHH
Confidence 3777876543100 000 1111110 001112238999999999999999998654 34556
Q ss_pred HHHHHHh
Q psy7769 291 VHMSLKR 297 (355)
Q Consensus 291 V~~~L~~ 297 (355)
+..++++
T Consensus 246 ~~~~l~~ 252 (276)
T 2b3t_A 246 VRQAFIL 252 (276)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666664
No 38
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.00 E-value=7.8e-10 Score=99.93 Aligned_cols=117 Identities=19% Similarity=0.091 Sum_probs=73.4
Q ss_pred hCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeec--ccCCC
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYS--TCSLS 237 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDa--PCSgs 237 (355)
+.+++|++|||+|||+|..+.+++...+.++|+|+|+|+.++ +.++.+ . ..++.++..|+...+. |-.
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~--~----~~~v~~~~~d~~~~~~~~~~~-- 124 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVR--E----RNNIIPLLFDASKPWKYSGIV-- 124 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHH--H----CSSEEEECSCTTCGGGTTTTC--
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHh--c----CCCeEEEEcCCCCchhhcccc--
Confidence 356799999999999999999999887668999999999987 444444 1 1356777777643210 100
Q ss_pred CCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEe---CCCCCCCCHHHH
Q psy7769 238 PIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYST---CSLSPIQNDGVV 291 (355)
Q Consensus 238 G~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsT---CSl~~~ENE~vV 291 (355)
+ + -++.+.. +..-...+.+++++.++|||||+++++. |.-.....+.+.
T Consensus 125 ~-~--fD~V~~~--~~~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~ 176 (210)
T 1nt2_A 125 E-K--VDLIYQD--IAQKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVF 176 (210)
T ss_dssp C-C--EEEEEEC--CCSTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHH
T ss_pred c-c--eeEEEEe--ccChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHH
Confidence 0 0 0111110 0000011145899999999999999984 322333445554
No 39
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.00 E-value=4e-11 Score=118.95 Aligned_cols=156 Identities=13% Similarity=0.027 Sum_probs=100.0
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCC-CcEEEEcCCchhh--HHhhccccccccCcce--EEEEEeccee----------
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYP-DYYCMDGASLLPV--LALNIRPYDTVLDIHA--LKLVKVGGSV---------- 229 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~-g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~--v~~~~~Da~~---------- 229 (355)
++|.+|||+|||+|++++++|..... ++|+++|+++.++ +++|++ . .+..+ ++++++|+..
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~--~--Ngl~~~~v~v~~~Da~~~l~~~~~~~f 126 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFK--L--NNIPEDRYEIHGMEANFFLRKEWGFGF 126 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHH--H--TTCCGGGEEEECSCHHHHHHSCCSSCE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--H--hCCCCceEEEEeCCHHHHHHHhhCCCC
Confidence 67999999999999999999986533 6899999999999 999998 3 35544 7888777532
Q ss_pred ----eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccCce
Q psy7769 230 ----VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCE 305 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~ 305 (355)
+||+|+ ...++..|+++|++|| ++|+||+-........+...+.+ +|..
T Consensus 127 D~V~lDP~g~----------------------~~~~l~~a~~~Lk~gG-ll~~t~t~~~~l~g~~~~~~~rk----Yg~~ 179 (392)
T 3axs_A 127 DYVDLDPFGT----------------------PVPFIESVALSMKRGG-ILSLTATDTAPLSGTYPKTCMRR----YMAR 179 (392)
T ss_dssp EEEEECCSSC----------------------CHHHHHHHHHHEEEEE-EEEEEECCHHHHTTSSHHHHHHH----HSSB
T ss_pred cEEEECCCcC----------------------HHHHHHHHHHHhCCCC-EEEEEecchhhhccccHHHHHHH----hCCc
Confidence 555431 0157899999999998 88999976553322233444444 3422
Q ss_pred EEEecccccc-cccccc-cccccCCCccEEEEecCCCCCCCceEEEEEEEc
Q psy7769 306 IEIKDLSQAL-RPLKSL-FSFANINLSYGHLVQPHLPSNFGPMYFCKFDKI 354 (355)
Q Consensus 306 ~~~~~l~~~~-~~~~~~-~~~~~~~~~~g~~~~P~~~~~~~gfFia~l~r~ 354 (355)
+.++.... .+..-. ........++|..+.|... -..+||+-+|.|.
T Consensus 180 --p~r~~~~~e~~~r~~L~~~~~~a~~~~~~i~P~l~-~~~~~y~Rv~vrv 227 (392)
T 3axs_A 180 --PLRNEFKHEVGIRILIKKVIELAAQYDIAMIPIFA-YSHLHYFKLFFVK 227 (392)
T ss_dssp --CCCSTTHHHHHHHHHHHHHHHHHHTTTEEEEEEEE-EEETTEEEEEEEE
T ss_pred --ccccccccchhHHHHHHHHHHhcccCCCeEEeeEE-EEeCcEEEEEEEE
Confidence 22221000 000000 0001101257778888764 3457999988874
No 40
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.99 E-value=3.3e-09 Score=94.41 Aligned_cols=131 Identities=9% Similarity=-0.074 Sum_probs=89.6
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecc
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYST 233 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaP 233 (355)
.....+.+.++.+|||+|||+|..+..++... ..++|+++|+++.++ +++++. . .+..++.+...|...+..+
T Consensus 28 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~--~--~~~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 28 KVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVN--K--LGLKNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH--H--HTCTTEEEEECBTTBCSSC
T ss_pred HHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHH--H--cCCCcEEEEecccccCCCC
Confidence 34455678899999999999999999999887 447999999999999 777776 3 3445788988887542211
Q ss_pred cCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCC---------CCHHHHHHHHHh
Q psy7769 234 CSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPI---------QNDGVVHMSLKR 297 (355)
Q Consensus 234 CSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~---------ENE~vV~~~L~~ 297 (355)
- + + -++.+...-+........+|+++.++|||||.++++++..... -+...+...+++
T Consensus 104 ~---~-~--fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (219)
T 3dh0_A 104 D---N-T--VDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILED 170 (219)
T ss_dssp S---S-C--EEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHH
T ss_pred C---C-C--eeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHH
Confidence 1 0 0 0111111111122223378999999999999999998765433 235666777765
No 41
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.99 E-value=1.1e-09 Score=103.79 Aligned_cols=116 Identities=19% Similarity=0.133 Sum_probs=83.6
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEeccee-----------
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSV----------- 229 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~----------- 229 (355)
+++|++|||+|||+|+.++++|... ..+|+|+|+++..+ +++|++ . .+. .++++.++|+..
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~--~--N~v~~~v~~~~~D~~~~~~~~~~D~Vi 197 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIH--L--NKVEDRMSAYNMDNRDFPGENIADRIL 197 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHH--H--TTCTTTEEEECSCTTTCCCCSCEEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHH--H--cCCCCcEEEEeCcHHHhccccCCCEEE
Confidence 5789999999999999999999864 36899999999999 999998 3 344 458899988764
Q ss_pred eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEE-eC--CCCCCCCHHHHHHHHHhhhhccCceE
Q psy7769 230 VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYS-TC--SLSPIQNDGVVHMSLKRIWEETGCEI 306 (355)
Q Consensus 230 lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYs-TC--Sl~~~ENE~vV~~~L~~~~~~~~~~~ 306 (355)
+++|.++ . +.|..|+++||+||.|.|. .+ .....+..+.++.+.+. .|.++
T Consensus 198 ~~~p~~~-------------~---------~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~----~g~~v 251 (278)
T 3k6r_A 198 MGYVVRT-------------H---------EFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKE----YGYDV 251 (278)
T ss_dssp ECCCSSG-------------G---------GGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHH----TTCEE
T ss_pred ECCCCcH-------------H---------HHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHH----cCCcE
Confidence 3334311 0 4588899999999998653 32 23344455666666654 45555
Q ss_pred EEec
Q psy7769 307 EIKD 310 (355)
Q Consensus 307 ~~~~ 310 (355)
+...
T Consensus 252 ~~~~ 255 (278)
T 3k6r_A 252 EKLN 255 (278)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5433
No 42
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.98 E-value=9.1e-10 Score=103.03 Aligned_cols=104 Identities=12% Similarity=0.054 Sum_probs=75.2
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcC--CCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceee-----ecc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLY--PDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVV-----YST 233 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~--~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~l-----DaP 233 (355)
++||.+|||+|||+|..+..+++... ..+|+|+|+|+.++ +++++. . .+. .+++++++|...+ |.-
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~--~--~~~~~~v~~~~~D~~~~~~~~~d~v 143 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHID--A--YKAPTPVDVIEGDIRDIAIENASMV 143 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHH--T--SCCSSCEEEEESCTTTCCCCSEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHH--h--hccCceEEEeecccccccccccccc
Confidence 57899999999999999999998753 35899999999999 788877 3 222 5789999997542 222
Q ss_pred cCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 234 CSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 234 CSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
.+... ++|-+. ...+.+|+++.+.|||||+++.+.-..
T Consensus 144 ~~~~~------l~~~~~-----~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 144 VLNFT------LQFLEP-----SERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp EEESC------GGGSCH-----HHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eeeee------eeecCc-----hhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 21111 222111 112278999999999999999986544
No 43
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.97 E-value=1.3e-09 Score=98.10 Aligned_cols=136 Identities=13% Similarity=0.065 Sum_probs=84.9
Q ss_pred hCCCCCCeEeeeccc-CcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee---------
Q psy7769 162 LNIRPYDTVLDMCAA-PGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV--------- 229 (355)
Q Consensus 162 L~~~pG~~VLD~CAg-PGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~--------- 229 (355)
..+++|.+|||+||| +|..+..++... .++|+++|+++.++ +++|+. . .+. ++.++..|+..
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~--~--~~~-~v~~~~~d~~~~~~~~~~~f 124 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIE--R--NNS-NVRLVKSNGGIIKGVVEGTF 124 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHH--H--TTC-CCEEEECSSCSSTTTCCSCE
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHH--H--hCC-CcEEEeCCchhhhhcccCce
Confidence 346789999999999 999999999875 58999999999999 888887 3 243 67788777421
Q ss_pred ----eecccCCCCCccCCc--c-ccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhcc
Q psy7769 230 ----VYSTCSLSPIQNDGV--V-HMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEET 302 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~--l-~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~ 302 (355)
+++|+...+. .+.. . .|... .......+++++.+.++|||||++++.+++-. ++...+...+++ .
T Consensus 125 D~I~~npp~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~~~l~~----~ 196 (230)
T 3evz_A 125 DVIFSAPPYYDKPL-GRVLTEREAIGGG-KYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE--KLLNVIKERGIK----L 196 (230)
T ss_dssp EEEEECCCCC----------------CC-SSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH--HHHHHHHHHHHH----T
T ss_pred eEEEECCCCcCCcc-ccccChhhhhccC-ccchHHHHHHHHHHHHHhCCCeEEEEEecccH--hHHHHHHHHHHH----c
Confidence 5555432220 0000 0 00000 00011123889999999999999999765421 333444445543 4
Q ss_pred CceEEEecc
Q psy7769 303 GCEIEIKDL 311 (355)
Q Consensus 303 ~~~~~~~~l 311 (355)
|+.++.+..
T Consensus 197 g~~~~~~~~ 205 (230)
T 3evz_A 197 GYSVKDIKF 205 (230)
T ss_dssp TCEEEEEEE
T ss_pred CCceEEEEe
Confidence 655555443
No 44
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.97 E-value=2.1e-09 Score=94.51 Aligned_cols=126 Identities=15% Similarity=0.096 Sum_probs=82.9
Q ss_pred hCCCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceee-------
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVV------- 230 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~l------- 230 (355)
+.+++|++|||+|||+|..+..++... ..++|+++|+++.++ +++++. . .+. .++.++..|+..+
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~~~~ 93 (197)
T 3eey_A 18 MFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLT--D--LNLIDRVTLIKDGHQNMDKYIDCP 93 (197)
T ss_dssp HHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHH--H--TTCGGGEEEECSCGGGGGGTCCSC
T ss_pred hcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCCeEEEECCHHHHhhhccCC
Confidence 356789999999999999999999876 347999999999999 788877 3 344 5788888886432
Q ss_pred -ecccCCCCCcc--CCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCC--CHHHHHHHHHh
Q psy7769 231 -YSTCSLSPIQN--DGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQ--NDGVVHMSLKR 297 (355)
Q Consensus 231 -DaPCSgsG~t~--~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~E--NE~vV~~~L~~ 297 (355)
|.-.+..+... +..+...+. ...++++.+.++|||||++++++++-.+.. ....+..+++.
T Consensus 94 fD~v~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (197)
T 3eey_A 94 VKAVMFNLGYLPSGDHSISTRPE------TTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKG 159 (197)
T ss_dssp EEEEEEEESBCTTSCTTCBCCHH------HHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTT
T ss_pred ceEEEEcCCcccCcccccccCcc------cHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHh
Confidence 22221111000 000001111 111789999999999999999886654332 23344455543
No 45
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.97 E-value=1.2e-09 Score=104.48 Aligned_cols=100 Identities=11% Similarity=0.037 Sum_probs=75.7
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceee-----ec
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVV-----YS 232 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~l-----Da 232 (355)
.++++++|++|||+|||||+.|..++.....++|+++|+++.++ ++++++ . .|..+++++.+|+..+ |+
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~--~--~gl~~v~~v~gDa~~l~d~~FDv 191 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIE--G--LGVDGVNVITGDETVIDGLEFDV 191 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHH--H--HTCCSEEEEESCGGGGGGCCCSE
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHH--h--cCCCCeEEEECchhhCCCCCcCE
Confidence 35789999999999999999886655444458999999999999 788877 3 3446899999998653 22
Q ss_pred ccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEe
Q psy7769 233 TCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 233 PCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsT 279 (355)
-.+..+ ....+++++++.+.|||||+|+...
T Consensus 192 V~~~a~----------------~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 192 LMVAAL----------------AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp EEECTT----------------CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEECCC----------------ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 221111 1223388999999999999999876
No 46
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.94 E-value=2.2e-09 Score=97.79 Aligned_cols=109 Identities=14% Similarity=0.069 Sum_probs=75.5
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCc--ceEEEEEecceeeecccCCC
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDI--HALKLVKVGGSVVYSTCSLS 237 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~--~~v~~~~~Da~~lDaPCSgs 237 (355)
+++++.+|||+|||+|..|..+|..++ .++|+++|+++.++ ++++++ . .+. .+++++.+|+..+-+.-. .
T Consensus 53 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~g~~~~~i~~~~gda~~~l~~~~-~ 127 (221)
T 3dr5_A 53 NGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFR--E--AGYSPSRVRFLLSRPLDVMSRLA-N 127 (221)
T ss_dssp CCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHH--H--TTCCGGGEEEECSCHHHHGGGSC-T
T ss_pred CCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCcCcEEEEEcCHHHHHHHhc-C
Confidence 455667999999999999999998764 58999999999999 888887 3 344 479999988754211100 0
Q ss_pred CCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 238 PIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 238 G~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+ +. ++.|... ........++.++++|||||.|++..+.+
T Consensus 128 ~-~f--D~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 128 D-SY--QLVFGQV---SPMDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp T-CE--EEEEECC---CTTTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred C-Cc--CeEEEcC---cHHHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 0 10 1111000 00112267999999999999999988876
No 47
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.93 E-value=1.5e-09 Score=97.94 Aligned_cols=109 Identities=12% Similarity=0.052 Sum_probs=75.7
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQND 242 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~ 242 (355)
.++.+|||+|||+|..+..+|+..+...|+|+|+++.++ +++++. . .+..|+.++.+|+..++... ..+ +.+
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~--~--~~~~nv~~~~~d~~~l~~~~-~~~-~~d 110 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVK--D--SEAQNVKLLNIDADTLTDVF-EPG-EVK 110 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH--H--SCCSSEEEECCCGGGHHHHC-CTT-SCC
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHH--H--cCCCCEEEEeCCHHHHHhhc-CcC-CcC
Confidence 467899999999999999999987668999999999999 777777 3 35567999999986532100 001 111
Q ss_pred Cc-cc----cchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEe
Q psy7769 243 GV-VH----MSLKRIWEETGCE-IEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 243 ~~-l~----~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsT 279 (355)
.- +. |...+-....-.+ .+|+.+.++|||||.|+++|
T Consensus 111 ~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 111 RVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred EEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 11 11 2211111111123 88999999999999999987
No 48
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.93 E-value=7.9e-09 Score=92.27 Aligned_cols=115 Identities=11% Similarity=0.004 Sum_probs=77.9
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-----ceEEEEEeccee
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-----HALKLVKVGGSV 229 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-----~~v~~~~~Da~~ 229 (355)
.+...+...++.+|||+|||+|..+..+++......|+++|+++.++ +++++. . .+. .++.+...|...
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~~~~~v~~~~~d~~~ 95 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLD--R--LRLPRNQWERLQLIQGALTY 95 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHT--T--CCCCHHHHTTEEEEECCTTS
T ss_pred HHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHH--H--hcCCcccCcceEEEeCCccc
Confidence 44455566788999999999999999999876557999999999999 777776 2 232 268899888754
Q ss_pred eecccCCCCCccCCccccchHHHHhhh--hHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 230 VYSTCSLSPIQNDGVVHMSLKRIWEET--GCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 230 lDaPCSgsG~t~~~~l~~~~~~l~~l~--~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
.+.+-. .-++.+...-+..+. .++.+|+.+.++|||||.++.+.+.
T Consensus 96 ~~~~~~------~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 143 (217)
T 3jwh_A 96 QDKRFH------GYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNI 143 (217)
T ss_dssp CCGGGC------SCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBH
T ss_pred ccccCC------CcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCc
Confidence 332210 011111111111111 1237899999999999988877664
No 49
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.93 E-value=2.5e-09 Score=98.74 Aligned_cols=117 Identities=15% Similarity=0.087 Sum_probs=81.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCCCCc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLSPIQ 240 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgsG~t 240 (355)
+.+|.+|||+|||+|..+..++.. ..++|+++|+++.++ ++++++ . .+. +++.++..|...+..+- + +
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~---~-~ 114 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNAR--Q--SGLQNRVTGIVGSMDDLPFRN---E-E 114 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHH--H--TTCTTTEEEEECCTTSCCCCT---T-C
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHH--H--cCCCcCcEEEEcChhhCCCCC---C-C
Confidence 678999999999999999999987 446999999999999 777776 3 344 45899998875432211 0 0
Q ss_pred cCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHH
Q psy7769 241 NDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVH 292 (355)
Q Consensus 241 ~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~ 292 (355)
-++.+...-+... ....+|+.+.++|||||+++.+++++........+.
T Consensus 115 --fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 163 (267)
T 3kkz_A 115 --LDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEIN 163 (267)
T ss_dssp --EEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHH
T ss_pred --EEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHH
Confidence 0111111111122 234789999999999999999998876655544433
No 50
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.93 E-value=5.2e-10 Score=103.83 Aligned_cols=112 Identities=13% Similarity=0.001 Sum_probs=79.7
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCcc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~ 241 (355)
+.++.+|||+|||+|..++.+|...+.++|+++|+++.++ +++|++ . .+..++.++++|+..+...-...+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~--~--~~l~~v~~~~~d~~~~~~~~~~~~--- 150 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIE--V--LGLKGARALWGRAEVLAREAGHRE--- 150 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH--H--HTCSSEEEEECCHHHHTTSTTTTT---
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH--H--hCCCceEEEECcHHHhhcccccCC---
Confidence 4678999999999999999999887678999999999999 888887 3 456679999988754321100000
Q ss_pred CCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCC
Q psy7769 242 DGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQ 286 (355)
Q Consensus 242 ~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~E 286 (355)
.-++.++ .....+..+++.+.++|||||++++..+....+|
T Consensus 151 ~fD~I~s----~a~~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e 191 (249)
T 3g89_A 151 AYARAVA----RAVAPLCVLSELLLPFLEVGGAAVAMKGPRVEEE 191 (249)
T ss_dssp CEEEEEE----ESSCCHHHHHHHHGGGEEEEEEEEEEECSCCHHH
T ss_pred CceEEEE----CCcCCHHHHHHHHHHHcCCCeEEEEEeCCCcHHH
Confidence 0011111 0112334789999999999999999888754433
No 51
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.92 E-value=3.7e-09 Score=96.88 Aligned_cols=124 Identities=14% Similarity=0.102 Sum_probs=83.2
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEec
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVG 226 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~D 226 (355)
+.....+...++...++.+|||+|||+|+.+..++..++ .++|+++|+++.++ ++++++ . .+. ++++++.+|
T Consensus 55 ~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~--~--~g~~~~i~~~~gd 130 (237)
T 3c3y_A 55 SPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIR--K--AGVEHKINFIESD 130 (237)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHH--H--TTCGGGEEEEESC
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCcEEEEEcC
Confidence 344455555556666778999999999999999999875 58999999999999 888887 3 344 468898888
Q ss_pred ceeeeccc--CCCCCccCCcccc-chHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 227 GSVVYSTC--SLSPIQNDGVVHM-SLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 227 a~~lDaPC--SgsG~t~~~~l~~-~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
+..+-+.. .+.. ...-++.+ ... .......++.+.++|+|||.|++.+|.+.
T Consensus 131 a~~~l~~l~~~~~~-~~~fD~I~~d~~----~~~~~~~l~~~~~~L~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 131 AMLALDNLLQGQES-EGSYDFGFVDAD----KPNYIKYHERLMKLVKVGGIVAYDNTLWG 185 (237)
T ss_dssp HHHHHHHHHHSTTC-TTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECTTGG
T ss_pred HHHHHHHHHhccCC-CCCcCEEEECCc----hHHHHHHHHHHHHhcCCCeEEEEecCCcC
Confidence 75421110 0000 00011111 000 01122789999999999999999988553
No 52
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.92 E-value=5.9e-09 Score=93.15 Aligned_cols=117 Identities=9% Similarity=-0.041 Sum_probs=77.4
Q ss_pred HHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccC
Q psy7769 158 PVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCS 235 (355)
Q Consensus 158 ~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCS 235 (355)
....+.+++|.+|||+|||+|..+..++...+.++|+++|+++.++ +.++.++.....+..++.++..|+..++.+.
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~- 97 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLS- 97 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCC-
T ss_pred HHHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCC-
Confidence 3455567899999999999999999999986568999999999988 3333221000034467899999986644332
Q ss_pred CCCCccCCc---cccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEe
Q psy7769 236 LSPIQNDGV---VHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 236 gsG~t~~~~---l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsT 279 (355)
+ + +.- +.|.............+|+++.++|||||+++++.
T Consensus 98 --~-~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 98 --G-V-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp --C-E-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred --C-C-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 1 1 111 11222100111111288999999999999999854
No 53
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.92 E-value=1.8e-09 Score=98.39 Aligned_cols=120 Identities=8% Similarity=0.004 Sum_probs=83.0
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecc
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGG 227 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da 227 (355)
+.....+...++...++.+|||+|||+|..+..++.....++|+++|+++.++ ++++++ . .+. .++.++.+|+
T Consensus 56 ~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~v~~~~~d~ 131 (232)
T 3ntv_A 56 DRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLA--T--YHFENQVRIIEGNA 131 (232)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHH--H--TTCTTTEEEEESCG
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCcEEEEECCH
Confidence 44555666666677788999999999999999999865568999999999999 888887 3 344 4789999887
Q ss_pred eeeec-ccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 228 SVVYS-TCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 228 ~~lDa-PCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
....+ .. .+ ..+. +..... ......+++.+.++|||||.|++..+-+
T Consensus 132 ~~~~~~~~--~~-~fD~-V~~~~~----~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 132 LEQFENVN--DK-VYDM-IFIDAA----KAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp GGCHHHHT--TS-CEEE-EEEETT----SSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred HHHHHhhc--cC-CccE-EEEcCc----HHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 54322 11 00 1111 100000 1112278999999999999999855443
No 54
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.92 E-value=2e-09 Score=98.86 Aligned_cols=121 Identities=10% Similarity=-0.032 Sum_probs=82.0
Q ss_pred EEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEec
Q psy7769 149 YCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVG 226 (355)
Q Consensus 149 ~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~D 226 (355)
+.|.......+..+.+.++.+|||+|||+|..+..++... ++|+++|+++.++ +++++. . .+..++.+..+|
T Consensus 20 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~--~--~~~~~v~~~~~d 93 (260)
T 1vl5_A 20 HAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIE--G--NGHQQVEYVQGD 93 (260)
T ss_dssp ---CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHH--H--TTCCSEEEEECC
T ss_pred ccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHH--h--cCCCceEEEEec
Confidence 4455556666777788899999999999999999888775 5999999999999 777766 3 344578898888
Q ss_pred ceeeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 227 GSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 227 a~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
+..++.|- + + -++.+....+........+|.++.++|||||+++.++..
T Consensus 94 ~~~l~~~~---~-~--fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 94 AEQMPFTD---E-R--FHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp C-CCCSCT---T-C--EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHhCCCCC---C-C--EEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 76532221 0 0 011111111112223337899999999999999997543
No 55
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.91 E-value=7.6e-10 Score=100.66 Aligned_cols=121 Identities=10% Similarity=-0.019 Sum_probs=81.2
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQND 242 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~ 242 (355)
.++.+|||+|||+|..+..+|+..+...|+|+|+++.++ +++++. . .+..|+.++.+|+..+-+.+-..| +.+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~--~--~~l~nv~~~~~Da~~~l~~~~~~~-~~d 107 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAH--E--EGLSNLRVMCHDAVEVLHKMIPDN-SLR 107 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH--H--TTCSSEEEECSCHHHHHHHHSCTT-CEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHH--H--hCCCcEEEEECCHHHHHHHHcCCC-Chh
Confidence 468899999999999999999987668899999999999 777776 3 456789999999765211000011 111
Q ss_pred Cc-cc----cchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHH
Q psy7769 243 GV-VH----MSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLK 296 (355)
Q Consensus 243 ~~-l~----~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~ 296 (355)
.- +. |...+-....-.+ .+++.+.+.|||||+++++|- ++.-.+++++
T Consensus 108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td------~~~~~~~~~~ 161 (218)
T 3dxy_A 108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD------WEPYAEHMLE 161 (218)
T ss_dssp EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES------CHHHHHHHHH
T ss_pred eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC------CHHHHHHHHH
Confidence 11 11 2222111111123 689999999999999999884 3444555444
No 56
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.91 E-value=2.3e-09 Score=96.22 Aligned_cols=124 Identities=10% Similarity=0.024 Sum_probs=82.1
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEec
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVG 226 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~D 226 (355)
+.....+...++...++.+|||+|||+|..|.+++..++ .++|+++|+++.++ ++++++ . .+. +++.++.+|
T Consensus 49 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~v~~~~~d 124 (225)
T 3tr6_A 49 APEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWE--K--AGLSDKIGLRLSP 124 (225)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHH--H--TTCTTTEEEEESC
T ss_pred CHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHH--H--CCCCCceEEEeCC
Confidence 344455666666667888999999999999999998765 58999999999999 888887 3 344 358898888
Q ss_pred ceeeecccCCCCCccCCcccc-chHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 227 GSVVYSTCSLSPIQNDGVVHM-SLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 227 a~~lDaPCSgsG~t~~~~l~~-~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+...-+.....+....-++.+ ... ......+++.+.++|||||.|++..+.+
T Consensus 125 ~~~~~~~~~~~~~~~~fD~v~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 125 AKDTLAELIHAGQAWQYDLIYIDAD----KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp HHHHHHHHHTTTCTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHHHHHhhhccCCCCccEEEECCC----HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 743111100000000011111 110 1112278999999999999999876654
No 57
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.91 E-value=1e-09 Score=97.84 Aligned_cols=119 Identities=8% Similarity=-0.078 Sum_probs=79.9
Q ss_pred chhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecc
Q psy7769 152 DGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGG 227 (355)
Q Consensus 152 D~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da 227 (355)
.....+...++...++.+|||+|||+|..|..++.... .++|+++|+++.++ ++++++ . .+. .++.++.+|+
T Consensus 42 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~v~~~~~d~ 117 (210)
T 3c3p_A 42 RQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLH--D--NGLIDRVELQVGDP 117 (210)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH--H--HSGGGGEEEEESCH
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--H--CCCCceEEEEEecH
Confidence 33444544445555678999999999999999998765 58999999999999 777877 3 233 4588888887
Q ss_pred eeeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 228 SVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 228 ~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
...-+.. .. -++.+... .......+++.+.++|||||.+++.++.+.
T Consensus 118 ~~~~~~~-----~~-fD~v~~~~---~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 164 (210)
T 3c3p_A 118 LGIAAGQ-----RD-IDILFMDC---DVFNGADVLERMNRCLAKNALLIAVNALRR 164 (210)
T ss_dssp HHHHTTC-----CS-EEEEEEET---TTSCHHHHHHHHGGGEEEEEEEEEESSSSC
T ss_pred HHHhccC-----CC-CCEEEEcC---ChhhhHHHHHHHHHhcCCCeEEEEECcccc
Confidence 4311111 00 11111000 001222789999999999999999877653
No 58
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.90 E-value=2.3e-09 Score=97.86 Aligned_cols=113 Identities=15% Similarity=0.045 Sum_probs=78.4
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc-eEEEEEecceeeecccCCCCC
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH-ALKLVKVGGSVVYSTCSLSPI 239 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~-~v~~~~~Da~~lDaPCSgsG~ 239 (355)
.+.++.+|||+|||+|..+..+++..+ ++|+++|+++.++ +++++. . .+.. ++.++..|+..+..+- +
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~--~--~~~~~~~~~~~~d~~~~~~~~---~- 113 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAV--K--ANCADRVKGITGSMDNLPFQN---E- 113 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHH--H--TTCTTTEEEEECCTTSCSSCT---T-
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHH--H--cCCCCceEEEECChhhCCCCC---C-
Confidence 567899999999999999999998874 4999999999999 777776 3 3443 4889998875432110 0
Q ss_pred ccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCC
Q psy7769 240 QNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQN 287 (355)
Q Consensus 240 t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~EN 287 (355)
+ -++.+...-+... ....+|+++.++|||||+++++++++.....
T Consensus 114 ~--fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~ 158 (257)
T 3f4k_A 114 E--LDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSER 158 (257)
T ss_dssp C--EEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCC
T ss_pred C--EEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCC
Confidence 0 0111100001111 2237899999999999999999987555443
No 59
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.90 E-value=5.5e-09 Score=99.06 Aligned_cols=116 Identities=16% Similarity=0.061 Sum_probs=80.8
Q ss_pred HHHHhhC-CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeec
Q psy7769 157 LPVLALN-IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYS 232 (355)
Q Consensus 157 l~~~~L~-~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDa 232 (355)
.+...+. +++|.+|||+|||+|..+..+++.. ..+|+++|+++.++ +++++. . .+. .++.+...|+..+..
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~ 181 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRAR--E--LRIDDHVRSRVCNMLDTPF 181 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHH--H--TTCTTTEEEEECCTTSCCC
T ss_pred HHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHH--H--cCCCCceEEEECChhcCCC
Confidence 3445555 7889999999999999999999875 37899999999999 777777 3 344 368999998754321
Q ss_pred ccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 233 TCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 233 PCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
+- + . -++.+...-+... ....+|+.+.++|||||++++++.....
T Consensus 182 ~~---~-~--fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 182 DK---G-A--VTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp CT---T-C--EEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred CC---C-C--EeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 10 0 0 1111111111122 2338999999999999999998865544
No 60
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.89 E-value=9.7e-09 Score=100.50 Aligned_cols=131 Identities=4% Similarity=-0.034 Sum_probs=86.8
Q ss_pred EechhcHHHHHhh-CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEec
Q psy7769 150 CMDGASLLPVLAL-NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVG 226 (355)
Q Consensus 150 ~QD~aS~l~~~~L-~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~D 226 (355)
.|+.++.+..... ...+|.+|||+| |+|..+..++.....++|+++|+++.++ +++|++ . .|..++.++.+|
T Consensus 155 ~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~--~--~g~~~v~~~~~D 229 (373)
T 2qm3_A 155 PETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAAN--E--IGYEDIEIFTFD 229 (373)
T ss_dssp HHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHH--H--HTCCCEEEECCC
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCEEEEECh
Confidence 3555555554322 345789999999 9999999998775457999999999999 888887 3 344478888888
Q ss_pred cee-eecccCCCCCccCCccc---cchHHHHhhhhHHHHHHHHHhhccCCc-EEEEEeCCCCCCCCH---HHHHHHHH
Q psy7769 227 GSV-VYSTCSLSPIQNDGVVH---MSLKRIWEETGCEIEIKHALKLVKVGG-SVVYSTCSLSPIQND---GVVHMSLK 296 (355)
Q Consensus 227 a~~-lDaPCSgsG~t~~~~l~---~~~~~l~~l~~lQ~lL~~A~~~LkpGG-~lVYsTCSl~~~ENE---~vV~~~L~ 296 (355)
+.. +..... + ..+.-+. +... .+..+|..+.+.||||| .++|++|+ ..++. ..+..++.
T Consensus 230 ~~~~l~~~~~--~-~fD~Vi~~~p~~~~------~~~~~l~~~~~~LkpgG~~~~~~~~~--~~~~~~~~~~~~~~l~ 296 (373)
T 2qm3_A 230 LRKPLPDYAL--H-KFDTFITDPPETLE------AIRAFVGRGIATLKGPRCAGYFGITR--RESSLDKWREIQKLLL 296 (373)
T ss_dssp TTSCCCTTTS--S-CBSEEEECCCSSHH------HHHHHHHHHHHTBCSTTCEEEEEECT--TTCCHHHHHHHHHHHH
T ss_pred hhhhchhhcc--C-CccEEEECCCCchH------HHHHHHHHHHHHcccCCeEEEEEEec--CcCCHHHHHHHHHHHH
Confidence 754 211000 0 0010000 1111 12488999999999999 55898887 34555 56666665
No 61
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.89 E-value=6.3e-09 Score=89.88 Aligned_cols=124 Identities=13% Similarity=0.088 Sum_probs=86.8
Q ss_pred hhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcce--EEEEEecce
Q psy7769 153 GASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHA--LKLVKVGGS 228 (355)
Q Consensus 153 ~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~--v~~~~~Da~ 228 (355)
..+......+.+.++.+|||+|||+|..+..++.. ...|+++|+++.++ +++++. . .+..+ +.+...|..
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~--~--~~~~~~~~~~~~~d~~ 112 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIK--L--NNLDNYDIRVVHSDLY 112 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHH--H--TTCTTSCEEEEECSTT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHH--H--cCCCccceEEEECchh
Confidence 45566667777889999999999999999998877 47999999999999 777776 3 34454 888888864
Q ss_pred e------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 229 V------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 229 ~------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
. .|.-.+... +++... ....+++.+.++|+|||.++.++++. ++...+...+++
T Consensus 113 ~~~~~~~~D~v~~~~~------~~~~~~------~~~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~l~~ 172 (194)
T 1dus_A 113 ENVKDRKYNKIITNPP------IRAGKE------VLHRIIEEGKELLKDNGEIWVVIQTK---QGAKSLAKYMKD 172 (194)
T ss_dssp TTCTTSCEEEEEECCC------STTCHH------HHHHHHHHHHHHEEEEEEEEEEEEST---HHHHHHHHHHHH
T ss_pred cccccCCceEEEECCC------cccchh------HHHHHHHHHHHHcCCCCEEEEEECCC---CChHHHHHHHHH
Confidence 3 222221110 111111 12278999999999999999998876 233334444544
No 62
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.88 E-value=4.6e-09 Score=90.63 Aligned_cols=132 Identities=13% Similarity=0.120 Sum_probs=91.3
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecc
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGG 227 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da 227 (355)
++.-..+....+.+.++.+|||+|||+|..+..++... .+|+++|+++.++ +++++. . .+. .++.+...|.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~--~--~~~~~~~~~~~~d~ 91 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQ--R--HGLGDNVTLMEGDA 91 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHH--H--TTCCTTEEEEESCH
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHH--H--cCCCcceEEEecCH
Confidence 34444555666788899999999999999999998876 7999999999999 777776 3 344 5678888776
Q ss_pred ee-------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhh
Q psy7769 228 SV-------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWE 300 (355)
Q Consensus 228 ~~-------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~ 300 (355)
.. .|.-.+... + ..+..+++.+.++|+|||.+++++++. ++...+..++++
T Consensus 92 ~~~~~~~~~~D~v~~~~~-------------~---~~~~~~l~~~~~~l~~gG~l~~~~~~~---~~~~~~~~~l~~--- 149 (192)
T 1l3i_A 92 PEALCKIPDIDIAVVGGS-------------G---GELQEILRIIKDKLKPGGRIIVTAILL---ETKFEAMECLRD--- 149 (192)
T ss_dssp HHHHTTSCCEEEEEESCC-------------T---TCHHHHHHHHHHTEEEEEEEEEEECBH---HHHHHHHHHHHH---
T ss_pred HHhcccCCCCCEEEECCc-------------h---HHHHHHHHHHHHhcCCCcEEEEEecCc---chHHHHHHHHHH---
Confidence 43 222211100 0 112378999999999999999999875 344445555554
Q ss_pred ccCceEEEecc
Q psy7769 301 ETGCEIEIKDL 311 (355)
Q Consensus 301 ~~~~~~~~~~l 311 (355)
.|++++...+
T Consensus 150 -~g~~~~~~~~ 159 (192)
T 1l3i_A 150 -LGFDVNITEL 159 (192)
T ss_dssp -TTCCCEEEEE
T ss_pred -CCCceEEEEE
Confidence 3545554443
No 63
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.88 E-value=2.9e-09 Score=97.46 Aligned_cols=107 Identities=19% Similarity=0.023 Sum_probs=78.9
Q ss_pred hhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh--HHhhccccccccCcce-EEEEEecce
Q psy7769 153 GASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV--LALNIRPYDTVLDIHA-LKLVKVGGS 228 (355)
Q Consensus 153 ~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~-v~~~~~Da~ 228 (355)
..+......+++.+|++|||+|||+|..+.+++..+ +.++|+++|+++.++ ++++++ . .+..+ +.+...|+.
T Consensus 80 ~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~ 155 (255)
T 3mb5_A 80 KDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIK--W--AGFDDRVTIKLKDIY 155 (255)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH--H--HTCTTTEEEECSCGG
T ss_pred hHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHH--H--cCCCCceEEEECchh
Confidence 344566777889999999999999999999999884 458999999999999 888887 3 34444 888888765
Q ss_pred e------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 229 V------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 229 ~------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
. +|.-.+. + + ....++.++.++|+|||+++..+-+
T Consensus 156 ~~~~~~~~D~v~~~----------~-~-------~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 156 EGIEEENVDHVILD----------L-P-------QPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp GCCCCCSEEEEEEC----------S-S-------CGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred hccCCCCcCEEEEC----------C-C-------CHHHHHHHHHHHcCCCCEEEEEECC
Confidence 3 2222110 0 0 0115689999999999999976533
No 64
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.88 E-value=1.1e-09 Score=99.97 Aligned_cols=112 Identities=12% Similarity=0.003 Sum_probs=78.2
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCc
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQ 240 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t 240 (355)
.+.++.+|||+|||+|..+..++.....++|+++|+++.++ ++++++ . .+..++.++++|+..+..+-.-.+ .
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~--~--~~~~~v~~~~~d~~~~~~~~~~~~-~ 141 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSE--A--LQLENTTFCHDRAETFGQRKDVRE-S 141 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH--H--HTCSSEEEEESCHHHHTTCTTTTT-C
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH--H--cCCCCEEEEeccHHHhcccccccC-C
Confidence 44578899999999999999999865568999999999999 788877 3 355578999988754322100000 0
Q ss_pred cCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCC
Q psy7769 241 NDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPI 285 (355)
Q Consensus 241 ~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ 285 (355)
-++.+... ...++.+++.+.++|||||++++..+....+
T Consensus 142 --fD~V~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~ 180 (240)
T 1xdz_A 142 --YDIVTARA----VARLSVLSELCLPLVKKNGLFVALKAASAEE 180 (240)
T ss_dssp --EEEEEEEC----CSCHHHHHHHHGGGEEEEEEEEEEECC-CHH
T ss_pred --ccEEEEec----cCCHHHHHHHHHHhcCCCCEEEEEeCCCchH
Confidence 11111100 1234488999999999999999987766443
No 65
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.87 E-value=4.5e-09 Score=94.07 Aligned_cols=110 Identities=11% Similarity=0.025 Sum_probs=75.6
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQND 242 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~ 242 (355)
.++.+|||+|||+|..+..++...+...|+|+|+++.++ +++++. . .+..++.++.+|+..+..... .+ +.+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~--~--~~~~~v~~~~~d~~~~~~~~~-~~-~~D 113 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVL--E--VGVPNIKLLWVDGSDLTDYFE-DG-EID 113 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH--H--HCCSSEEEEECCSSCGGGTSC-TT-CCS
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHH--H--cCCCCEEEEeCCHHHHHhhcC-CC-CCC
Confidence 568899999999999999999987668999999999999 778877 3 345678999999865321010 01 111
Q ss_pred Cc-----cccchHHHHhh-hhHHHHHHHHHhhccCCcEEEEEeC
Q psy7769 243 GV-----VHMSLKRIWEE-TGCEIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 243 ~~-----l~~~~~~l~~l-~~lQ~lL~~A~~~LkpGG~lVYsTC 280 (355)
.- ..|...+.... .....+|..+.++|||||.+++.|-
T Consensus 114 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 114 RLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp EEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred EEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 11 01211111111 1122889999999999999999763
No 66
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.87 E-value=4.4e-09 Score=95.89 Aligned_cols=115 Identities=12% Similarity=0.061 Sum_probs=79.9
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecc
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYST 233 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaP 233 (355)
.....+.+.+|.+|||+|||+|..+..++... ...|+++|+++.++ +++++. . .+. .++.+...|+..+..
T Consensus 27 ~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~- 100 (256)
T 1nkv_A 27 TLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAE--E--LGVSERVHFIHNDAAGYVA- 100 (256)
T ss_dssp HHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHH--H--TTCTTTEEEEESCCTTCCC-
T ss_pred HHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHH--h--cCCCcceEEEECChHhCCc-
Confidence 44455678899999999999999999999876 46899999999999 777776 2 244 468888888754211
Q ss_pred cCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 234 CSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 234 CSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
.+ +. ++.+....+........+|+++.++|||||+++.++....
T Consensus 101 ---~~-~f--D~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~ 144 (256)
T 1nkv_A 101 ---NE-KC--DVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWR 144 (256)
T ss_dssp ---SS-CE--EEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEET
T ss_pred ---CC-CC--CEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCccc
Confidence 00 10 1111111111222234789999999999999999876543
No 67
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.86 E-value=6.5e-09 Score=97.86 Aligned_cols=116 Identities=16% Similarity=0.013 Sum_probs=81.2
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceee---
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVV--- 230 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~l--- 230 (355)
..+..+++++|.+|||+|||+|..+..+++..+ .+|+++|+|+.++ +++++. . .+. .++.+...|...+
T Consensus 63 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~ 137 (302)
T 3hem_A 63 LALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFD--E--VDSPRRKEVRIQGWEEFDEP 137 (302)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHH--H--SCCSSCEEEEECCGGGCCCC
T ss_pred HHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHH--h--cCCCCceEEEECCHHHcCCC
Confidence 345566788999999999999999999998754 7999999999999 777776 3 344 3688998887543
Q ss_pred -ecccCCCCCccCCccccchHH--HHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 231 -YSTCSLSPIQNDGVVHMSLKR--IWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 231 -DaPCSgsG~t~~~~l~~~~~~--l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
|...+... +.+-++. ......+..+|+++.++|||||+++..+.+..
T Consensus 138 fD~v~~~~~------~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 138 VDRIVSLGA------FEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp CSEEEEESC------GGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred ccEEEEcch------HHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 22221110 1111000 00001223789999999999999999988764
No 68
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.86 E-value=5.3e-09 Score=102.32 Aligned_cols=86 Identities=16% Similarity=0.215 Sum_probs=66.2
Q ss_pred CCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc-----------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG----------------- 227 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da----------------- 227 (355)
|.+|||+|||+|..|+.+|... .+|+|+|+++.++ +++|++ . .+..+++++.+|+
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~--~--ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~ 287 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIA--A--NHIDNVQIIRMAAEEFTQAMNGVREFNRLQ 287 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHH--H--TTCCSEEEECCCSHHHHHHHSSCCCCTTGG
T ss_pred CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHH--H--cCCCceEEEECCHHHHHHHHhhcccccccc
Confidence 6799999999999999988743 6899999999999 888887 3 3556777776554
Q ss_pred -----------eeeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 228 -----------SVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 228 -----------~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
..+|||..|. ...+++.|++||+|||.+|+.
T Consensus 288 ~~~~~~~~fD~Vv~dPPr~g~------------------------~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 288 GIDLKSYQCETIFVDPPRSGL------------------------DSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp GSCGGGCCEEEEEECCCTTCC------------------------CHHHHHHHTTSSEEEEEESCH
T ss_pred ccccccCCCCEEEECcCcccc------------------------HHHHHHHHhCCCEEEEEECCH
Confidence 2366665322 335566677999999999964
No 69
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.85 E-value=3e-09 Score=94.41 Aligned_cols=109 Identities=13% Similarity=0.076 Sum_probs=81.4
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEe
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKV 225 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~ 225 (355)
++.+..........+.++++++|||+|||+|..+..++... ++|+++|+++.++ +++++. . .+..++.+...
T Consensus 59 ~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~--~~v~~vD~~~~~~~~a~~~~~--~--~~~~~v~~~~~ 132 (210)
T 3lbf_A 59 TISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLV--QHVCSVERIKGLQWQARRRLK--N--LDLHNVSTRHG 132 (210)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHH--H--TTCCSEEEEES
T ss_pred EeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHH--H--cCCCceEEEEC
Confidence 45566556666778889999999999999999999999883 8999999999999 888887 3 35567899988
Q ss_pred ccee-------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 226 GGSV-------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 226 Da~~-------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
|+.. .|.-.+..+ +. .+...+.++|||||+++.+...
T Consensus 133 d~~~~~~~~~~~D~i~~~~~------~~-------------~~~~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 133 DGWQGWQARAPFDAIIVTAA------PP-------------EIPTALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CGGGCCGGGCCEEEEEESSB------CS-------------SCCTHHHHTEEEEEEEEEEECS
T ss_pred CcccCCccCCCccEEEEccc------hh-------------hhhHHHHHhcccCcEEEEEEcC
Confidence 8754 222221111 00 1123578899999999998876
No 70
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.85 E-value=2e-08 Score=89.66 Aligned_cols=115 Identities=10% Similarity=-0.039 Sum_probs=76.7
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-----ceEEEEEeccee
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-----HALKLVKVGGSV 229 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-----~~v~~~~~Da~~ 229 (355)
.+...+...++.+|||+|||+|..+..++......+|+++|+++.++ +++++. . .+. .++.+...|...
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~~~~~v~~~~~d~~~ 95 (219)
T 3jwg_A 20 TVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLK--I--DRLPEMQRKRISLFQSSLVY 95 (219)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHT--G--GGSCHHHHTTEEEEECCSSS
T ss_pred HHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHH--h--hccccccCcceEEEeCcccc
Confidence 34455556788999999999999999998876557999999999999 777766 2 122 268899888744
Q ss_pred eecccCCCCCccCCccccchHHHHhhh--hHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 230 VYSTCSLSPIQNDGVVHMSLKRIWEET--GCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 230 lDaPCSgsG~t~~~~l~~~~~~l~~l~--~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
.+.+-. .-++.+...-+..+. .+..+|+++.++|||||.++.+.+.
T Consensus 96 ~~~~~~------~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 96 RDKRFS------GYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp CCGGGT------TCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred cccccC------CCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccch
Confidence 322210 011111111111122 1237899999999999977776654
No 71
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.84 E-value=2.3e-09 Score=98.44 Aligned_cols=125 Identities=11% Similarity=0.015 Sum_probs=78.4
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcccccc--c--cCcceEEEEEeccee-eecccCC
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDT--V--LDIHALKLVKVGGSV-VYSTCSL 236 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~--~--~g~~~v~~~~~Da~~-lDaPCSg 236 (355)
+.++.+|||+|||+|+.+..+|.....+.|+++|+++.++ ++++++.... . .+..|+.++.+|+.. ++ .+-.
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~-~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLP-NFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGG-GTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHH-Hhcc
Confidence 4578899999999999999999987667899999999999 7776652100 0 044678999999864 22 1100
Q ss_pred CCCccCCc-cc----cchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHH
Q psy7769 237 SPIQNDGV-VH----MSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLK 296 (355)
Q Consensus 237 sG~t~~~~-l~----~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~ 296 (355)
.| +.+.. +. |...+.......+ .++..+.++|+|||.|+++| .++...+++.+
T Consensus 126 ~~-~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t------d~~~~~~~~~~ 184 (246)
T 2vdv_E 126 KG-QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT------DVKDLHEWMVK 184 (246)
T ss_dssp TT-CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE------SCHHHHHHHHH
T ss_pred cc-ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe------ccHHHHHHHHH
Confidence 11 11111 11 2111111111122 78999999999999999966 33454554443
No 72
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.84 E-value=3.1e-09 Score=100.56 Aligned_cols=120 Identities=12% Similarity=-0.022 Sum_probs=80.9
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc-eEEEEEecc-------------
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH-ALKLVKVGG------------- 227 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~-~v~~~~~Da------------- 227 (355)
..++.+|||+|||+|..+..++.. +..+|+|+|+|+.++ +++|++ . .+.. ++.++..|.
T Consensus 121 ~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~--~--~~l~~~v~~~~~D~~~~~~~~f~~~D~ 195 (284)
T 1nv8_A 121 KYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAE--R--HGVSDRFFVRKGEFLEPFKEKFASIEM 195 (284)
T ss_dssp HHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHH--H--TTCTTSEEEEESSTTGGGGGGTTTCCE
T ss_pred ccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHH--H--cCCCCceEEEECcchhhcccccCCCCE
Confidence 347789999999999999999988 668999999999999 888887 3 3443 377776543
Q ss_pred eeeecccCCCCCccCCccccchHHHHhhhhHH--HHHHHHH-hhccCCcEEEEEeCCCCCCCCHHHHH
Q psy7769 228 SVVYSTCSLSPIQNDGVVHMSLKRIWEETGCE--IEIKHAL-KLVKVGGSVVYSTCSLSPIQNDGVVH 292 (355)
Q Consensus 228 ~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ--~lL~~A~-~~LkpGG~lVYsTCSl~~~ENE~vV~ 292 (355)
...++||.+.+......++|.+..... .... .++++++ +.++|||.+++. +...+++.|.+
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~-~~~dgl~~~~~i~~~~l~pgG~l~~e---~~~~q~~~v~~ 259 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALF-GGEDGLDFYREFFGRYDTSGKIVLME---IGEDQVEELKK 259 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHB-CTTTSCHHHHHHHHHCCCTTCEEEEE---CCTTCHHHHTT
T ss_pred EEEcCCCCCcccccChhhccCcHHHhc-CCCcHHHHHHHHHHhcCCCCCEEEEE---ECchHHHHHHH
Confidence 446778766542111113343332111 1111 6789999 999999999973 33445444433
No 73
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.84 E-value=1.1e-08 Score=92.16 Aligned_cols=107 Identities=13% Similarity=0.032 Sum_probs=76.1
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCcc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~ 241 (355)
+.++.+|||+|||+|..+..++...+..+|+++|+++.++ +++++. . .+ ++.++..|...++.+ + +.
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--~--~~--~~~~~~~d~~~~~~~----~-~f 110 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFR--G--NL--KVKYIEADYSKYDFE----E-KY 110 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTC--S--CT--TEEEEESCTTTCCCC----S-CE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhc--c--CC--CEEEEeCchhccCCC----C-Cc
Confidence 5688999999999999999999987668999999999999 777776 2 22 688888887653332 1 11
Q ss_pred CCccccchHHHHhhhhHH--HHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 242 DGVVHMSLKRIWEETGCE--IEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 242 ~~~l~~~~~~l~~l~~lQ--~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
+- .+...-+..+...+ ++|+++.++|||||.++.++....
T Consensus 111 D~--v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 111 DM--VVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp EE--EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred eE--EEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 10 00001111111112 689999999999999999987764
No 74
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.83 E-value=9.7e-09 Score=89.98 Aligned_cols=108 Identities=17% Similarity=0.100 Sum_probs=72.7
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeeccc--CCCC-C
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTC--SLSP-I 239 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPC--SgsG-~ 239 (355)
.+|.+|||+|||+|..+..++.. +..+|+++|+++.++ +++|++ . .+..+++++++|+..+.... ...- +
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIE--A--LGLSGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHH--H--HTCSCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHH--H--cCCCceEEEEccHHHHHhhccCCCccEE
Confidence 57899999999999999987775 336899999999999 888887 3 34467889988865421100 0000 0
Q ss_pred ccCCccccchHHHHhhhhHHHHHHHHHh--hccCCcEEEEEeCCCC
Q psy7769 240 QNDGVVHMSLKRIWEETGCEIEIKHALK--LVKVGGSVVYSTCSLS 283 (355)
Q Consensus 240 t~~~~l~~~~~~l~~l~~lQ~lL~~A~~--~LkpGG~lVYsTCSl~ 283 (355)
..+....+.. ...++++..+.+ +|+|||.++..+.+-.
T Consensus 118 ~~~~p~~~~~------~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 118 LADPPYNVDS------ADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp EECCCTTSCH------HHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred EECCCCCcch------hhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 0000001111 122377888888 9999999999887653
No 75
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.83 E-value=3.6e-09 Score=100.68 Aligned_cols=116 Identities=14% Similarity=-0.020 Sum_probs=78.0
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------e
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV-------------V 230 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~-------------l 230 (355)
.+.+|||+|||+|+.+..++...+.++|+++|+++..+ +++++..+....+.+++.++..|+.. +
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 45799999999999999998865557999999999999 77777421000223568888877632 4
Q ss_pred ecccCCCCCccCCccccchHHHHhhhh-H-HHHHHHHHhhccCCcEEEEEeCC--CCCCCCHHHHHHHHH
Q psy7769 231 YSTCSLSPIQNDGVVHMSLKRIWEETG-C-EIEIKHALKLVKVGGSVVYSTCS--LSPIQNDGVVHMSLK 296 (355)
Q Consensus 231 DaPCSgsG~t~~~~l~~~~~~l~~l~~-l-Q~lL~~A~~~LkpGG~lVYsTCS--l~~~ENE~vV~~~L~ 296 (355)
|+++...| .... . +++++.+.++|+|||.+++.+|+ +.+.+...+++.+.+
T Consensus 170 d~~~~~~~---------------~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 224 (296)
T 1inl_A 170 DSTDPTAG---------------QGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISK 224 (296)
T ss_dssp EC-------------------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHH
T ss_pred cCCCcccC---------------chhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHH
Confidence 44442111 0011 1 27899999999999999999998 444555555555444
No 76
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.82 E-value=9.7e-09 Score=93.62 Aligned_cols=112 Identities=10% Similarity=-0.004 Sum_probs=78.0
Q ss_pred HHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCC
Q psy7769 159 VLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSL 236 (355)
Q Consensus 159 ~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSg 236 (355)
+..+.+.+|.+|||+|||+|..+..++... ..+|+++|+++.++ +++++. . . .++.+...|...++.|-
T Consensus 48 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~--~---~-~~~~~~~~d~~~~~~~~-- 118 (266)
T 3ujc_A 48 LSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVS--G---N-NKIIFEANDILTKEFPE-- 118 (266)
T ss_dssp TTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCC--S---C-TTEEEEECCTTTCCCCT--
T ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhh--c---C-CCeEEEECccccCCCCC--
Confidence 344567889999999999999999999875 47999999999999 666666 2 1 56888888875432211
Q ss_pred CCCccCCccccchHHHHhh--hhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 237 SPIQNDGVVHMSLKRIWEE--TGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 237 sG~t~~~~l~~~~~~l~~l--~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
+ + -++.+...-+... .....+|+++.++|||||+++.++.+..
T Consensus 119 -~-~--fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 119 -N-N--FDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp -T-C--EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred -C-c--EEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 0 0 0111111112222 2233889999999999999999876543
No 77
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.82 E-value=1.3e-08 Score=92.61 Aligned_cols=125 Identities=11% Similarity=-0.009 Sum_probs=81.6
Q ss_pred chhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCcc-eEEEEEecc
Q psy7769 152 DGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDIH-ALKLVKVGG 227 (355)
Q Consensus 152 D~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~-~v~~~~~Da 227 (355)
.....+...++...++.+|||+|||+|..+..++..++ .++|+++|+++.++ +++++. . .+.. ++.+..+|+
T Consensus 46 ~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~g~~~~v~~~~~d~ 121 (239)
T 2hnk_A 46 PEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWK--E--NGLENKIFLKLGSA 121 (239)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHH--H--TTCGGGEEEEESCH
T ss_pred HHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCCEEEEECCH
Confidence 33344555566677899999999999999999998865 48999999999999 777876 3 3443 488888887
Q ss_pred eeeec--ccC------CCCCc---cCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 228 SVVYS--TCS------LSPIQ---NDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 228 ~~lDa--PCS------gsG~t---~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
....+ +.. ..+.. ..-++.+... .......+++.+.++|+|||++++.++.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~---~~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 185 (239)
T 2hnk_A 122 LETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDA---DKENYPNYYPLILKLLKPGGLLIADNVLWD 185 (239)
T ss_dssp HHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEEEEECSSGG
T ss_pred HHHHHHHHhhcccccccccccCCCCCcCEEEEeC---CHHHHHHHHHHHHHHcCCCeEEEEEccccC
Confidence 43111 000 00000 0011111000 011222779999999999999999886554
No 78
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.81 E-value=8.6e-09 Score=95.30 Aligned_cols=120 Identities=12% Similarity=0.039 Sum_probs=80.8
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEec
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVG 226 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~D 226 (355)
+.....+...++...++.+|||+|||+|..+..++..++ .++|+++|+++.++ ++++++ . .+. .++.++.+|
T Consensus 64 ~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~--~--~g~~~~i~~~~gd 139 (247)
T 1sui_A 64 SADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIK--K--AGVDHKIDFREGP 139 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHH--H--TTCGGGEEEEESC
T ss_pred CHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCCeEEEECC
Confidence 344455555666666778999999999999999999875 58999999999999 888887 3 344 568899888
Q ss_pred ceeeeccc--CC--CCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeC
Q psy7769 227 GSVVYSTC--SL--SPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 227 a~~lDaPC--Sg--sG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTC 280 (355)
+...-+.. .+ .+ +. ++.+.... .......++.+.++|||||.|++..+
T Consensus 140 a~~~l~~l~~~~~~~~-~f--D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 140 ALPVLDEMIKDEKNHG-SY--DFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp HHHHHHHHHHSGGGTT-CB--SEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred HHHHHHHHHhccCCCC-CE--EEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 75421100 00 00 11 11110000 01122789999999999999998763
No 79
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.81 E-value=9.2e-09 Score=95.88 Aligned_cols=105 Identities=10% Similarity=0.015 Sum_probs=78.5
Q ss_pred HHHHHhhCCCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceee-
Q psy7769 156 LLPVLALNIRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVV- 230 (355)
Q Consensus 156 ~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~l- 230 (355)
...+..+++.+|.+|||+|||+|..+..++... ..++|+++|+++.++ ++++++ . .+. .++.+...|....
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~ 177 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLT--K--WGLIERVTIKVRDISEGF 177 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHH--H--TTCGGGEEEECCCGGGCC
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHH--H--cCCCCCEEEEECCHHHcc
Confidence 455667789999999999999999999999884 358999999999999 788877 3 243 4678877776431
Q ss_pred -----ecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 231 -----YSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 231 -----DaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
|.-.+ .+. ...++|.++.++|+|||++++.+++.
T Consensus 178 ~~~~~D~V~~------------~~~------~~~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 178 DEKDVDALFL------------DVP------DPWNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp SCCSEEEEEE------------CCS------CGGGTHHHHHHHEEEEEEEEEEESSH
T ss_pred cCCccCEEEE------------CCc------CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 11110 000 01156889999999999999998865
No 80
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.80 E-value=3.6e-09 Score=96.94 Aligned_cols=107 Identities=17% Similarity=0.059 Sum_probs=70.9
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCcc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~ 241 (355)
..+|.+|||+|||.|..+.++++.. ...|+++|+++..+ ++++.. . ...++.++.+|+..+..+... + +.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~--~---~~~~~~~~~~~a~~~~~~~~~-~-~F 129 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAP--R---QTHKVIPLKGLWEDVAPTLPD-G-HF 129 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGG--G---CSSEEEEEESCHHHHGGGSCT-T-CE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHh--h---CCCceEEEeehHHhhcccccc-c-CC
Confidence 4689999999999999998887653 36899999999999 777776 2 224677777776543222200 0 00
Q ss_pred CCccc----cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEe
Q psy7769 242 DGVVH----MSLKRIWEETGCEIEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 242 ~~~l~----~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsT 279 (355)
+. +. ............+.+++++.++|||||+++|.+
T Consensus 130 D~-i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 130 DG-ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EE-EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ce-EEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 00 00 011112222333478999999999999999965
No 81
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.79 E-value=2.2e-08 Score=92.10 Aligned_cols=117 Identities=9% Similarity=0.021 Sum_probs=87.7
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc-eEEEEEeccee-------eecc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH-ALKLVKVGGSV-------VYST 233 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~-~v~~~~~Da~~-------lDaP 233 (355)
+.+|++|||+|||+|..++.+|.....++|+|+|+++..+ +++|++ . .+.. +|++..+|+.. +|+-
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~--~--~gl~~~i~~~~~d~l~~l~~~~~~D~I 88 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVE--A--HGLKEKIQVRLANGLAAFEETDQVSVI 88 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHH--H--TTCTTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCceEEEEECchhhhcccCcCCCEE
Confidence 5689999999999999999999876557999999999999 899998 3 3553 58999999842 2222
Q ss_pred c-CCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccCceEEEe
Q psy7769 234 C-SLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIK 309 (355)
Q Consensus 234 C-SgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~ 309 (355)
. .|.| .. .+.+||..+...|++||++|.+.- .+...|..+|.++ |+.+.-.
T Consensus 89 viaG~G-----------g~-----~i~~Il~~~~~~L~~~~~lVlq~~-----~~~~~vr~~L~~~----Gf~i~~e 140 (225)
T 3kr9_A 89 TIAGMG-----------GR-----LIARILEEGLGKLANVERLILQPN-----NREDDLRIWLQDH----GFQIVAE 140 (225)
T ss_dssp EEEEEC-----------HH-----HHHHHHHHTGGGCTTCCEEEEEES-----SCHHHHHHHHHHT----TEEEEEE
T ss_pred EEcCCC-----------hH-----HHHHHHHHHHHHhCCCCEEEEECC-----CCHHHHHHHHHHC----CCEEEEE
Confidence 2 1212 00 122899999999999999999655 4788888888763 5555433
No 82
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.79 E-value=1.8e-08 Score=91.83 Aligned_cols=121 Identities=12% Similarity=0.006 Sum_probs=79.9
Q ss_pred hhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecce
Q psy7769 153 GASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGS 228 (355)
Q Consensus 153 ~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~ 228 (355)
....+...++...++.+|||+|||+|..+..++..++ .++|+++|+++.++ ++++++ . .+. .++.+..+|+.
T Consensus 59 ~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~--~--~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 59 EQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQ--K--AGVAEKISLRLGPAL 134 (232)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH--H--HTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCcEEEEEcCHH
Confidence 3344444555556788999999999999999998765 47999999999999 777776 3 244 45888888864
Q ss_pred ee--ecccCC-CCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 229 VV--YSTCSL-SPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 229 ~l--DaPCSg-sG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
.. ..+-.+ .+ . -++.+.... .......++.+.++|+|||.|++..+.+.
T Consensus 135 ~~l~~l~~~~~~~-~--fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 135 ATLEQLTQGKPLP-E--FDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp HHHHHHHTSSSCC-C--EEEEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred HHHHHHHhcCCCC-C--cCEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 21 001000 00 0 011110000 01222789999999999999999988764
No 83
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.78 E-value=9.8e-09 Score=93.69 Aligned_cols=109 Identities=7% Similarity=-0.083 Sum_probs=72.0
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCC-chhh--H---HhhccccccccCcceEEEEEecceeeecccCCC
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGAS-LLPV--L---ALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLS 237 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s-~~Rl--l---~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgs 237 (355)
.++|++|||+|||+|..+..+|+....+.|+++|+| +.++ + ++++. . .+..++.+...|+..++... .
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~--~--~~~~~v~~~~~d~~~l~~~~--~ 95 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPS--K--GGLSNVVFVIAAAESLPFEL--K 95 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGG--G--TCCSSEEEECCBTTBCCGGG--T
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHH--H--cCCCCeEEEEcCHHHhhhhc--c
Confidence 468999999999999999999976555789999999 6664 3 55554 2 35568899999987652111 1
Q ss_pred CCccCCcc--ccchHHHHhh-hhHHHHHHHHHhhccCCcEEEEEe
Q psy7769 238 PIQNDGVV--HMSLKRIWEE-TGCEIEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 238 G~t~~~~l--~~~~~~l~~l-~~lQ~lL~~A~~~LkpGG~lVYsT 279 (355)
+....-.+ .|... .... .....+|..+.++|||||+++.++
T Consensus 96 d~v~~i~~~~~~~~~-~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 96 NIADSISILFPWGTL-LEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp TCEEEEEEESCCHHH-HHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred CeEEEEEEeCCCcHH-hhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 11000001 12221 1111 111278999999999999999844
No 84
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.77 E-value=1.5e-08 Score=89.69 Aligned_cols=119 Identities=14% Similarity=0.001 Sum_probs=82.6
Q ss_pred cHHHHHhhC--CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-
Q psy7769 155 SLLPVLALN--IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV- 229 (355)
Q Consensus 155 S~l~~~~L~--~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~- 229 (355)
.......+. +.++.+|||+|||+|..+..++.. +..+|+++|+++.++ +++++. . .+..++.+...|...
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~--~--~~~~~v~~~~~d~~~~ 121 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAA--L--NGIYDIALQKTSLLAD 121 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHH--H--TTCCCCEEEESSTTTT
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHH--H--cCCCceEEEecccccc
Confidence 344444444 678999999999999999998875 346999999999999 777776 3 344457888888743
Q ss_pred ----eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 230 ----VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
+|.-.+. .... .+..+++.+.++|+|||++++++... +....+...+++
T Consensus 122 ~~~~fD~i~~~----------~~~~------~~~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~ 174 (205)
T 3grz_A 122 VDGKFDLIVAN----------ILAE------ILLDLIPQLDSHLNEDGQVIFSGIDY---LQLPKIEQALAE 174 (205)
T ss_dssp CCSCEEEEEEE----------SCHH------HHHHHGGGSGGGEEEEEEEEEEEEEG---GGHHHHHHHHHH
T ss_pred CCCCceEEEEC----------CcHH------HHHHHHHHHHHhcCCCCEEEEEecCc---ccHHHHHHHHHH
Confidence 2222211 0011 12378999999999999999976654 345556666654
No 85
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.76 E-value=6.3e-09 Score=95.57 Aligned_cols=128 Identities=9% Similarity=-0.095 Sum_probs=84.3
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHh----cCCCcEEEEcCCchhh-HHhhccccccccCcceEEEEEecceeee
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQT----LYPDYYCMDGASLLPV-LALNIRPYDTVLDIHALKLVKVGGSVVY 231 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~----~~~g~V~AvD~s~~Rl-l~~~l~r~~~~~g~~~v~~~~~Da~~lD 231 (355)
+...++...++.+|||+|||+|+.|..+|.. ...++|+++|+++.++ ..+.+. .+++++.+|+...+
T Consensus 72 ~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~--------~~v~~~~gD~~~~~ 143 (236)
T 2bm8_A 72 VYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDM--------ENITLHQGDCSDLT 143 (236)
T ss_dssp HHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGC--------TTEEEEECCSSCSG
T ss_pred HHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccC--------CceEEEECcchhHH
Confidence 3344455556789999999999999999987 3458999999999988 322211 46889999986531
Q ss_pred -cccCCCCCccCCccccchHHHHhhhhHHHHHHHHHh-hccCCcEEEEEe-CCCCCCCCHHHHHHHHHhh
Q psy7769 232 -STCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALK-LVKVGGSVVYST-CSLSPIQNDGVVHMSLKRI 298 (355)
Q Consensus 232 -aPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~-~LkpGG~lVYsT-CSl~~~ENE~vV~~~L~~~ 298 (355)
.|.-..+ ..+. +..... . .....+|.++.+ +|||||+||+.. |.+.+..+...+..+++.+
T Consensus 144 ~l~~~~~~-~fD~-I~~d~~---~-~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~ 207 (236)
T 2bm8_A 144 TFEHLREM-AHPL-IFIDNA---H-ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAF 207 (236)
T ss_dssp GGGGGSSS-CSSE-EEEESS---C-SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTT
T ss_pred HHHhhccC-CCCE-EEECCc---h-HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhC
Confidence 1210000 0011 110000 0 123378999997 999999999974 4555566777888888875
No 86
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.76 E-value=6.3e-08 Score=84.59 Aligned_cols=110 Identities=16% Similarity=0.121 Sum_probs=68.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCC---------CcEEEEcCCchhhHHhhccccccccCcceEEEE-Ee--------
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYP---------DYYCMDGASLLPVLALNIRPYDTVLDIHALKLV-KV-------- 225 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~---------g~V~AvD~s~~Rll~~~l~r~~~~~g~~~v~~~-~~-------- 225 (355)
+++|++|||+|||||..+..+++..+. ++|+++|+++.+.+ .++.++ ..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~-------------~~~~~~~~~d~~~~~~~ 86 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPL-------------EGATFLCPADVTDPRTS 86 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCC-------------TTCEEECSCCTTSHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccC-------------CCCeEEEeccCCCHHHH
Confidence 678999999999999999999988643 78999999985410 011222 22
Q ss_pred ------------cceeeecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHH
Q psy7769 226 ------------GGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVH 292 (355)
Q Consensus 226 ------------Da~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~ 292 (355)
|....|.++..+| .|..+.. ....++ .+++.+.++|||||+++.+++.. ++...+.
T Consensus 87 ~~~~~~~~~~~fD~V~~~~~~~~~~-------~~~~~~~-~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~---~~~~~~~ 155 (196)
T 2nyu_A 87 QRILEVLPGRRADVILSDMAPNATG-------FRDLDHD-RLISLCLTLLSVTPDILQPGGTFLCKTWAG---SQSRRLQ 155 (196)
T ss_dssp HHHHHHSGGGCEEEEEECCCCCCCS-------CHHHHHH-HHHHHHHHHHHHHHHHEEEEEEEEEEECCS---GGGHHHH
T ss_pred HHHHHhcCCCCCcEEEeCCCCCCCC-------CcccCHH-HHHHHHHHHHHHHHHHhcCCCEEEEEecCC---ccHHHHH
Confidence 2222333222222 1212211 112233 88999999999999999987644 3334444
Q ss_pred HHHHh
Q psy7769 293 MSLKR 297 (355)
Q Consensus 293 ~~L~~ 297 (355)
..+..
T Consensus 156 ~~l~~ 160 (196)
T 2nyu_A 156 RRLTE 160 (196)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 45544
No 87
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.76 E-value=6.2e-09 Score=91.57 Aligned_cols=124 Identities=8% Similarity=-0.083 Sum_probs=67.2
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEE----------------ec
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVK----------------VG 226 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~----------------~D 226 (355)
.++.+|||+|||+|..+..++......+|+++|+++.++ +++++. . .+. ++.++. .|
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~~~-~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAE--R--FGA-VVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH--H--hCC-ceEEEEcchHhhhhhhhhccCccc
Confidence 788999999999999999999987557999999999999 777776 2 222 344433 34
Q ss_pred ceeeecccCCCCCccC--Cccc-cchHHH-----HhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHH
Q psy7769 227 GSVVYSTCSLSPIQND--GVVH-MSLKRI-----WEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLK 296 (355)
Q Consensus 227 a~~lDaPCSgsG~t~~--~~l~-~~~~~l-----~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~ 296 (355)
....|+|+...+.... ..+. +.+... ..+..+..+++++.++|||||++++.++.. .....+..++.
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l~ 178 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH---NQADEVARLFA 178 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT---SCHHHHHHHTG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC---ccHHHHHHHHH
Confidence 4457777744331000 0000 111000 001111378999999999999966666553 45566666665
No 88
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.76 E-value=1e-08 Score=99.18 Aligned_cols=91 Identities=20% Similarity=0.163 Sum_probs=73.1
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEeccee---------ee
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSV---------VY 231 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~---------lD 231 (355)
..+|.+|||+|||+|+.+.. |. +..+|+|+|+++..+ +++|++ . .+. .++.++++|+.. +|
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~--~--n~l~~~v~~~~~D~~~~~~~fD~Vi~d 265 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIK--L--NKLEHKIIPILSDVREVDVKGNRVIMN 265 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHH--H--TTCTTTEEEEESCGGGCCCCEEEEEEC
T ss_pred cCCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHH--H--cCCCCcEEEEECChHHhcCCCcEEEEC
Confidence 35899999999999999999 76 357899999999999 888887 3 344 468888888743 44
Q ss_pred cccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 232 STCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 232 aPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
+|..+ . +++..+.++|+|||.++|++|+-.
T Consensus 266 pP~~~----------------~------~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 266 LPKFA----------------H------KFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp CTTTG----------------G------GGHHHHHHHEEEEEEEEEEEEESS
T ss_pred CcHhH----------------H------HHHHHHHHHcCCCCEEEEEEeecC
Confidence 44311 0 568899999999999999999987
No 89
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.76 E-value=1.5e-08 Score=93.61 Aligned_cols=107 Identities=14% Similarity=0.007 Sum_probs=76.1
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCc
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQ 240 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t 240 (355)
.+.++.+|||+|||+|..+..++...+.++|+++|+++.++ +++++. . .+..++.+...|...+..+- + +
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--~--~~~~~~~~~~~d~~~~~~~~---~-~ 105 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTE--K--NGIKNVKFLQANIFSLPFED---S-S 105 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH--H--TTCCSEEEEECCGGGCCSCT---T-C
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCcEEEEcccccCCCCC---C-C
Confidence 45789999999999999999999886568999999999999 777776 3 35567889988876432221 1 0
Q ss_pred cCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEe
Q psy7769 241 NDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 241 ~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsT 279 (355)
-++.+...-+........+|+++.++|||||.++..+
T Consensus 106 --fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 106 --FDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp --EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --eeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 0111111111122223378999999999999999986
No 90
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.75 E-value=2.6e-08 Score=92.03 Aligned_cols=118 Identities=12% Similarity=0.057 Sum_probs=88.0
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEeccee-------eecc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSV-------VYST 233 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~-------lDaP 233 (355)
+.+|++|||+|||+|..++.++.....++|+|+|+++..+ +++|++ . .+. .++.+..+|+.. +|+-
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~--~--~gl~~~I~~~~gD~l~~~~~~~~~D~I 94 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVS--E--HGLTSKIDVRLANGLSAFEEADNIDTI 94 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHH--H--TTCTTTEEEEECSGGGGCCGGGCCCEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCcEEEEECchhhccccccccCEE
Confidence 5689999999999999999999876557899999999999 899998 3 344 359999999753 2322
Q ss_pred c-CCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccCceEEEec
Q psy7769 234 C-SLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKD 310 (355)
Q Consensus 234 C-SgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~ 310 (355)
. .|.| .+ .+.+||..+...|+++|++|.+.- .++..|..+|.++ |+.+.-..
T Consensus 95 viaGmG----------g~------lI~~IL~~~~~~l~~~~~lIlqp~-----~~~~~lr~~L~~~----Gf~i~~E~ 147 (230)
T 3lec_A 95 TICGMG----------GR------LIADILNNDIDKLQHVKTLVLQPN-----NREDDLRKWLAAN----DFEIVAED 147 (230)
T ss_dssp EEEEEC----------HH------HHHHHHHHTGGGGTTCCEEEEEES-----SCHHHHHHHHHHT----TEEEEEEE
T ss_pred EEeCCc----------hH------HHHHHHHHHHHHhCcCCEEEEECC-----CChHHHHHHHHHC----CCEEEEEE
Confidence 1 1222 01 112889999999999999998763 4688888888764 55554433
No 91
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.75 E-value=1e-08 Score=91.16 Aligned_cols=129 Identities=12% Similarity=0.066 Sum_probs=88.1
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
+..-..+....+...++.+|||+|||+|..+..++... ..|+++|+++.++ +++++. . ..++.+...|..
T Consensus 36 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--~----~~~~~~~~~d~~ 107 (216)
T 3ofk_A 36 RERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTK--R----WSHISWAATDIL 107 (216)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTT--T----CSSEEEEECCTT
T ss_pred HHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcc--c----CCCeEEEEcchh
Confidence 43445556666777889999999999999999998875 6899999999999 777776 2 236889888875
Q ss_pred eee------cccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeC------CCCCCCCHHHHHHHHH
Q psy7769 229 VVY------STCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTC------SLSPIQNDGVVHMSLK 296 (355)
Q Consensus 229 ~lD------aPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTC------Sl~~~ENE~vV~~~L~ 296 (355)
.+. .-.+... +.+-+ ....+..+|.++.++|||||.++++|. .+....+...+..++.
T Consensus 108 ~~~~~~~fD~v~~~~~------l~~~~----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (216)
T 3ofk_A 108 QFSTAELFDLIVVAEV------LYYLE----DMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILT 177 (216)
T ss_dssp TCCCSCCEEEEEEESC------GGGSS----SHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCSCCHHHHHHHHH
T ss_pred hCCCCCCccEEEEccH------HHhCC----CHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhhhhHHHHHHHHH
Confidence 533 2211100 11111 111223789999999999999999873 3334555566666665
Q ss_pred h
Q psy7769 297 R 297 (355)
Q Consensus 297 ~ 297 (355)
.
T Consensus 178 ~ 178 (216)
T 3ofk_A 178 E 178 (216)
T ss_dssp H
T ss_pred h
Confidence 4
No 92
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.75 E-value=4.3e-08 Score=86.15 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=34.2
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcC--CCcEEEEcCCch
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLY--PDYYCMDGASLL 201 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~--~g~V~AvD~s~~ 201 (355)
+++|.+|||+|||||+.|..+++..+ .++|+|+|+++.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~ 59 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM 59 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc
Confidence 57899999999999999999998875 589999999984
No 93
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.75 E-value=2.6e-08 Score=85.96 Aligned_cols=102 Identities=16% Similarity=0.006 Sum_probs=70.5
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEeccee--------eec
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSV--------VYS 232 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~--------lDa 232 (355)
..++.+|||+|||+|..+..++.. +..+|+++|+++.++ ++++++ . .+. .++.++..|+.. .|.
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~~~~~~~d~~~~~~~~~~~fD~ 103 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNII--M--TKAENRFTLLKMEAERAIDCLTGRFDL 103 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHH--T--TTCGGGEEEECSCHHHHHHHBCSCEEE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHH--H--cCCCCceEEEECcHHHhHHhhcCCCCE
Confidence 568899999999999999999887 346999999999999 888887 3 344 368888877643 111
Q ss_pred ccCCCCCccCCccccchHHHHhhhhHHHHHHHH--HhhccCCcEEEEEeCCCCC
Q psy7769 233 TCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHA--LKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 233 PCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A--~~~LkpGG~lVYsTCSl~~ 284 (355)
-.+. .. +... ...+.++.. .++|+|||.+++++++-..
T Consensus 104 i~~~------~~--~~~~------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 104 VFLD------PP--YAKE------TIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp EEEC------CS--SHHH------HHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred EEEC------CC--CCcc------hHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 1100 00 1111 111344444 4999999999999887643
No 94
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.75 E-value=9.4e-09 Score=94.70 Aligned_cols=115 Identities=12% Similarity=0.058 Sum_probs=79.3
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecc
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYST 233 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaP 233 (355)
.....+.+.+|.+|||+|||+|..+..++... ..+|+++|+|+.++ +++++. . .+. .++.+...|...+..+
T Consensus 52 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 52 EMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARAT--A--AGLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHH--H--TTCTTTEEEEECCTTSCCSC
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHH--h--cCCCcceEEEECccccCCCC
Confidence 34455677899999999999999999998865 47999999999999 666665 2 233 3688888887543221
Q ss_pred cCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 234 CSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 234 CSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
- + + -++.+...-+........+|+++.++|||||+++.++...
T Consensus 127 ~---~-~--fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 127 D---A-S--FDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp T---T-C--EEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred C---C-C--ccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 1 0 0 0111111112222223478999999999999999988654
No 95
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.75 E-value=1.4e-08 Score=97.17 Aligned_cols=96 Identities=9% Similarity=-0.051 Sum_probs=61.9
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcC----Cchhh-HHhhccccccccCcceEEEEEe-ccee--------
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGA----SLLPV-LALNIRPYDTVLDIHALKLVKV-GGSV-------- 229 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~----s~~Rl-l~~~l~r~~~~~g~~~v~~~~~-Da~~-------- 229 (355)
+++|.+|||+|||||+.|..+++. ++|+++|+ ++.++ .. ..+ . .+.+++.++.. |...
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~-~~~--~--~~~~~v~~~~~~D~~~l~~~~fD~ 151 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPI-PMS--T--YGWNLVRLQSGVDVFFIPPERCDT 151 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCC-CCC--S--TTGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHH-Hhh--h--cCCCCeEEEeccccccCCcCCCCE
Confidence 578999999999999999999886 68999999 55444 11 112 1 22345777766 6542
Q ss_pred --eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEe
Q psy7769 230 --VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 230 --lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsT 279 (355)
.|.+|+ +|. |..+... .+ .+|..+.++|||||.++..+
T Consensus 152 V~sd~~~~-~g~-------~~~d~~~---~l-~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 152 LLCDIGES-SPN-------PTVEAGR---TL-RVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp EEECCCCC-CSS-------HHHHHHH---HH-HHHHHHHHHCCTTCEEEEEE
T ss_pred EEECCccc-cCc-------chhhHHH---HH-HHHHHHHHHhCCCCEEEEEe
Confidence 343332 231 1111110 01 47888999999999888643
No 96
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.75 E-value=2.3e-08 Score=89.27 Aligned_cols=115 Identities=11% Similarity=-0.108 Sum_probs=72.2
Q ss_pred hCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcccccc--------ccCcceEEEEEecceeee
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDT--------VLDIHALKLVKVGGSVVY 231 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~--------~~g~~~v~~~~~Da~~lD 231 (355)
+.+.+|.+|||+|||+|..+..+++.+ ..|+|+|+|+.++ ++++...... .....++.+.++|+..++
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~ 95 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQG--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT 95 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHHC--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHCC--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC
Confidence 456789999999999999999999874 5899999999999 6555431000 001246788888875432
Q ss_pred cccCCCCCccCCccccchHHHHhhh--hHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 232 STCSLSPIQNDGVVHMSLKRIWEET--GCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 232 aPCSgsG~t~~~~l~~~~~~l~~l~--~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
.+- .+ + -++.+...-+..+. ..+..++++.++|||||++++.|+...
T Consensus 96 ~~~--~~-~--fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~ 144 (203)
T 1pjz_A 96 ARD--IG-H--CAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYD 144 (203)
T ss_dssp HHH--HH-S--EEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSC
T ss_pred ccc--CC-C--EEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecC
Confidence 210 00 0 00001000011111 112689999999999999777776654
No 97
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.74 E-value=1.6e-08 Score=89.16 Aligned_cols=113 Identities=12% Similarity=0.054 Sum_probs=76.7
Q ss_pred HHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeeccc
Q psy7769 158 PVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTC 234 (355)
Q Consensus 158 ~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPC 234 (355)
....+.++++ +|||+|||+|..+..++.. ...+|+++|+++.++ +++++. . .+. .++.+...|...++.+-
T Consensus 36 ~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~--~--~~~~~~~~~~~~d~~~~~~~~ 109 (219)
T 3dlc_A 36 IINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIA--D--ANLNDRIQIVQGDVHNIPIED 109 (219)
T ss_dssp HHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHH--H--TTCTTTEEEEECBTTBCSSCT
T ss_pred HHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHH--h--ccccCceEEEEcCHHHCCCCc
Confidence 3445566677 9999999999999999987 447999999999999 777776 3 233 46889888875532211
Q ss_pred CCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 235 SLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 235 SgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+ .-++.+...-+........+|+++.++|||||.++.++...
T Consensus 110 ---~---~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 110 ---N---YADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp ---T---CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred ---c---cccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 0 00111111111122233378999999999999999986444
No 98
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.73 E-value=2.4e-08 Score=90.90 Aligned_cols=109 Identities=7% Similarity=-0.061 Sum_probs=73.5
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeeccc
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTC 234 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPC 234 (355)
-.+..+.+.++.+|||+|||+|..+..++...+.++|+++|+++.++ ++++.. ++.+...|+..+. +-
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~---------~~~~~~~d~~~~~-~~ 93 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLP---------NTNFGKADLATWK-PA 93 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHST---------TSEEEECCTTTCC-CS
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCC---------CcEEEECChhhcC-cc
Confidence 33445567789999999999999999999886568999999999999 555432 3466777765432 10
Q ss_pred CCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 235 SLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 235 SgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
+ +. ++.+...-+........+|+++.++|||||+++.++..
T Consensus 94 ---~-~f--D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 94 ---Q-KA--DLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp ---S-CE--EEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred ---C-Cc--CEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 0 00 11111111111223337899999999999999998853
No 99
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.73 E-value=2e-08 Score=93.87 Aligned_cols=109 Identities=7% Similarity=-0.078 Sum_probs=76.5
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCCCC
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLSPI 239 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgsG~ 239 (355)
.+.++.+|||+|||+|..+..++... ..+|+++|+++.++ +++++. . .+. .++.+...|...+..+- +
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~~~~~~~d~~~~~~~~---~- 149 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNN--Q--AGLADNITVKYGSFLEIPCED---N- 149 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHH--H--HTCTTTEEEEECCTTSCSSCT---T-
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHH--h--cCCCcceEEEEcCcccCCCCC---C-
Confidence 77899999999999999999999875 36999999999999 666665 2 233 46888888875432111 0
Q ss_pred ccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 240 QNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 240 t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+ -++.+...-+........+|+++.++|||||+++.++...
T Consensus 150 ~--fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 150 S--YDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp C--EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred C--EeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 0 0111111112222333488999999999999999997654
No 100
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.73 E-value=2.4e-08 Score=98.18 Aligned_cols=116 Identities=12% Similarity=0.032 Sum_probs=83.7
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc---ceEEEEEe
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI---HALKLVKV 225 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~---~~v~~~~~ 225 (355)
.|.++.+....+...++.+|||+|||+|..+..++...+..+|+++|+++.++ +++|+. . .+. .++.+...
T Consensus 207 ~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~--~--ngl~~~~~v~~~~~ 282 (375)
T 4dcm_A 207 LDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE--T--NMPEALDRCEFMIN 282 (375)
T ss_dssp CCHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH--H--HCGGGGGGEEEEEC
T ss_pred ccHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHH--H--cCCCcCceEEEEec
Confidence 45667777888888888999999999999999999987668999999999999 788877 3 232 25777777
Q ss_pred ccee-----------eecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 226 GGSV-----------VYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 226 Da~~-----------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
|+.. +++|..... +.. .... ++++.+.+.|||||++++++-+..+
T Consensus 283 D~~~~~~~~~fD~Ii~nppfh~~~--------~~~------~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~ 339 (375)
T 4dcm_A 283 NALSGVEPFRFNAVLCNPPFHQQH--------ALT------DNVAWEMFHHARRCLKINGELYIVANRHLD 339 (375)
T ss_dssp STTTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHHEEEEEEEEEEEETTSC
T ss_pred hhhccCCCCCeeEEEECCCcccCc--------ccC------HHHHHHHHHHHHHhCCCCcEEEEEEECCcC
Confidence 7542 333321000 000 0112 7899999999999999997655543
No 101
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.73 E-value=2.7e-08 Score=90.71 Aligned_cols=112 Identities=17% Similarity=0.076 Sum_probs=79.5
Q ss_pred HHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhcccccccc-CcceEEEEEecceeee
Q psy7769 156 LLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVL-DIHALKLVKVGGSVVY 231 (355)
Q Consensus 156 ~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~-g~~~v~~~~~Da~~lD 231 (355)
...+..+++.+|++|||+|||+|..+..++...+ .++|+++|+++.++ ++++++ . . +..++.+...|....+
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~--~--~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVR--A--FWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH--H--HCCCCCEEEEESCGGGCC
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH--H--hcCCCCEEEEECchhhcC
Confidence 4566677889999999999999999999998853 58999999999999 777776 3 2 4457888888875321
Q ss_pred cccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 232 STCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 232 aPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
.+- + ..+. +.... .....+|+++.++|+|||+++..+.+.
T Consensus 162 ~~~---~-~~D~-v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 162 LEE---A-AYDG-VALDL------MEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp CCT---T-CEEE-EEEES------SCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred CCC---C-CcCE-EEECC------cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 110 0 0000 10000 011157999999999999999988654
No 102
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.73 E-value=3.6e-08 Score=93.30 Aligned_cols=113 Identities=12% Similarity=0.066 Sum_probs=79.6
Q ss_pred HHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeeccc
Q psy7769 158 PVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTC 234 (355)
Q Consensus 158 ~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPC 234 (355)
....+.+.+|.+|||+|||+|..+..++... ..+|+++|+++.++ +++++. . .+. .++.+...|...++
T Consensus 82 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~--- 153 (318)
T 2fk8_A 82 NLDKLDLKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLA--S--IDTNRSRQVLLQGWEDFA--- 153 (318)
T ss_dssp HHTTSCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHH--T--SCCSSCEEEEESCGGGCC---
T ss_pred HHHhcCCCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHH--h--cCCCCceEEEECChHHCC---
Confidence 3445567899999999999999999999875 36999999999999 777776 3 233 45888888875432
Q ss_pred CCCCCccCCccccchHHHHhh--hhHHHHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 235 SLSPIQNDGVVHMSLKRIWEE--TGCEIEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 235 SgsG~t~~~~l~~~~~~l~~l--~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
+ +.+.- +...-+... .....+|+++.++|||||+++.++.+...
T Consensus 154 ---~-~fD~v--~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 154 ---E-PVDRI--VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp ---C-CCSEE--EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred ---C-CcCEE--EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 1 11111 111111112 22338899999999999999999887643
No 103
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.73 E-value=4.2e-08 Score=86.70 Aligned_cols=115 Identities=15% Similarity=-0.004 Sum_probs=78.3
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee---------ee
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV---------VY 231 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~---------lD 231 (355)
.+.+|.+|||+|||+|..+..++... .++|+++|+++.++ +++++. . .+. ++.++..|+.. +|
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~--~--~~~-~~~~~~~d~~~~~~~~D~v~~~ 119 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLG--E--FKG-KFKVFIGDVSEFNSRVDIVIMN 119 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTG--G--GTT-SEEEEESCGGGCCCCCSEEEEC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHH--H--cCC-CEEEEECchHHcCCCCCEEEEc
Confidence 46689999999999999999998873 35899999999999 788877 3 233 67777776643 55
Q ss_pred cccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccCceEEE
Q psy7769 232 STCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEI 308 (355)
Q Consensus 232 aPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~ 308 (355)
+|+.. +... ....+|+.+.+.+ || +|+.| +.+.++.+.+.+++++ .|++++.
T Consensus 120 ~p~~~----------~~~~------~~~~~l~~~~~~l--~~--~~~~~-~~~~~~~~~~~~~l~~----~g~~~~~ 171 (207)
T 1wy7_A 120 PPFGS----------QRKH------ADRPFLLKAFEIS--DV--VYSIH-LAKPEVRRFIEKFSWE----HGFVVTH 171 (207)
T ss_dssp CCCSS----------SSTT------TTHHHHHHHHHHC--SE--EEEEE-ECCHHHHHHHHHHHHH----TTEEEEE
T ss_pred CCCcc----------ccCC------chHHHHHHHHHhc--Cc--EEEEE-eCCcCCHHHHHHHHHH----CCCeEEE
Confidence 55411 1110 0115688888887 43 67777 3345667777777764 4544443
No 104
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.73 E-value=1.8e-08 Score=93.33 Aligned_cols=114 Identities=16% Similarity=0.029 Sum_probs=80.5
Q ss_pred hcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhcccccccc-C--cceEEEEEecc
Q psy7769 154 ASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVL-D--IHALKLVKVGG 227 (355)
Q Consensus 154 aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~-g--~~~v~~~~~Da 227 (355)
.....+..+++.+|++|||+|||+|..+.+++...+ .++|+++|+++.++ +++++. . . + ..++.+...|+
T Consensus 87 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 87 DAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVS--G--CYGQPPDNWRLVVSDL 162 (280)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH--H--HHTSCCTTEEEECSCG
T ss_pred HHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH--H--hcCCCCCcEEEEECch
Confidence 345666777899999999999999999999998653 58999999999999 777776 3 2 3 35688888887
Q ss_pred eeeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 228 SVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 228 ~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
.....+- + ..+.-+. . .....++|.++.++|+|||++++++++.
T Consensus 163 ~~~~~~~---~-~~D~v~~-~------~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 163 ADSELPD---G-SVDRAVL-D------MLAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp GGCCCCT---T-CEEEEEE-E------SSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred HhcCCCC---C-ceeEEEE-C------CcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 5421110 0 0010000 0 0011156999999999999999988765
No 105
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.72 E-value=8.1e-08 Score=87.01 Aligned_cols=102 Identities=14% Similarity=0.043 Sum_probs=71.9
Q ss_pred hCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee----eecccC
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV----VYSTCS 235 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~----lDaPCS 235 (355)
+.+.+|++|||+|||+|..+.+++...+.++|+++|+++.++ ++++++ . . .++.++..|+.. .+.+
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~--~---~-~~v~~~~~d~~~~~~~~~~~-- 141 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACA--E---R-ENIIPILGDANKPQEYANIV-- 141 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTT--T---C-TTEEEEECCTTCGGGGTTTS--
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhh--c---C-CCeEEEECCCCCcccccccC--
Confidence 346789999999999999999999886568999999999999 777776 3 2 578888888754 2111
Q ss_pred CCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEE
Q psy7769 236 LSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYS 278 (355)
Q Consensus 236 gsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYs 278 (355)
+ ..+--++.-+ .....+.+|+++.++|||||+++.+
T Consensus 142 --~-~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 142 --E-KVDVIYEDVA----QPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp --C-CEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --c-cEEEEEEecC----ChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 0 1010011000 0001126799999999999999987
No 106
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.72 E-value=1.5e-08 Score=90.36 Aligned_cols=108 Identities=13% Similarity=0.008 Sum_probs=70.4
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc--ceEEEEEecceeeecccCCCCCcc
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI--HALKLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~--~~v~~~~~Da~~lDaPCSgsG~t~ 241 (355)
+|.+|||+|||+|..+..++... .+.|+++|+|+.++ +++|++ . .+. .++.++.+|+........ .+ .
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~--~--~~~~~~~v~~~~~d~~~~~~~~~-~~-~- 124 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQ--T--LKCSSEQAEVINQSSLDFLKQPQ-NQ-P- 124 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHH--H--TTCCTTTEEEECSCHHHHTTSCC-SS-C-
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHH--H--hCCCccceEEEECCHHHHHHhhc-cC-C-
Confidence 78899999999999999877664 36899999999999 888887 3 344 578888877643211100 00 0
Q ss_pred CCc-cccchHHHHhhhhHHHHHHHH--HhhccCCcEEEEEeCCCC
Q psy7769 242 DGV-VHMSLKRIWEETGCEIEIKHA--LKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 242 ~~~-l~~~~~~l~~l~~lQ~lL~~A--~~~LkpGG~lVYsTCSl~ 283 (355)
.-+ +...+- . .....++++..+ .++|||||.+++++|+..
T Consensus 125 ~fD~I~~~~~-~-~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 125 HFDVVFLDPP-F-HFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CEEEEEECCC-S-SSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCEEEECCC-C-CCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 001 000000 0 001122556666 678999999999999875
No 107
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.72 E-value=1.5e-08 Score=90.34 Aligned_cols=95 Identities=15% Similarity=-0.008 Sum_probs=68.4
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------e
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV-------------V 230 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~-------------l 230 (355)
+|.+|||+|||+|..+..++... ..+|+++|+++.++ +++|++ . .+..++.+++.|+.. +
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~--~--~~~~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLA--T--LKAGNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHH--H--TTCCSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHH--H--cCCCcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 78899999999999999877764 25899999999999 888887 3 344578888877643 2
Q ss_pred ecccCCCCCccCCccccchHHHHhhhhHHHHHHHHH--hhccCCcEEEEEeCCCCC
Q psy7769 231 YSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHAL--KLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 231 DaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~--~~LkpGG~lVYsTCSl~~ 284 (355)
|+|. .. ....++++... ++|+|||.+++++|+...
T Consensus 129 ~~p~-------------~~------~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~ 165 (202)
T 2fpo_A 129 DPPF-------------RR------GLLEETINLLEDNGWLADEALIYVESEVENG 165 (202)
T ss_dssp CCSS-------------ST------TTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC
T ss_pred CCCC-------------CC------CcHHHHHHHHHhcCccCCCcEEEEEECCCcc
Confidence 2221 10 01114455554 469999999999998654
No 108
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.71 E-value=3e-08 Score=89.07 Aligned_cols=120 Identities=13% Similarity=0.054 Sum_probs=78.2
Q ss_pred cHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceee
Q psy7769 155 SLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVV 230 (355)
Q Consensus 155 S~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~l 230 (355)
..+...++...++.+|||+|||+|..+..++..+. .++|+++|+++.++ ++++++ . .+. .++.++.+|+...
T Consensus 58 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~g~~~~i~~~~~d~~~~ 133 (229)
T 2avd_A 58 AQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWR--Q--AEAEHKIDLRLKPALET 133 (229)
T ss_dssp HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHH--H--TTCTTTEEEEESCHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--H--CCCCCeEEEEEcCHHHH
Confidence 34445555667888999999999999999998765 58999999999999 777876 3 243 4688888886431
Q ss_pred ecccCCCCCccCCcccc-chHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 231 YSTCSLSPIQNDGVVHM-SLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 231 DaPCSgsG~t~~~~l~~-~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
-......|....-++.+ ... ......+++.+.++|+|||.+++..+..
T Consensus 134 ~~~~~~~~~~~~~D~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 134 LDELLAAGEAGTFDVAVVDAD----KENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp HHHHHHTTCTTCEEEEEECSC----STTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred HHHHHhcCCCCCccEEEECCC----HHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 00000000000001111 100 0111267999999999999999987654
No 109
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.71 E-value=4.4e-09 Score=100.20 Aligned_cols=128 Identities=13% Similarity=0.046 Sum_probs=80.8
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEe
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKV 225 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~ 225 (355)
|..++......+..+++.+|++|||+|||+|..|..+++.. ++|+|+|+++.++ +++++. . .+..++.++.+
T Consensus 24 fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~--~~v~~vDi~~~~~~~a~~~~~--~--~~~~~v~~~~~ 97 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLA--KKVITIDIDSRMISEVKKRCL--Y--EGYNNLEVYEG 97 (299)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTS--SEEEEECSCHHHHHHHHHHHH--H--TTCCCEEC---
T ss_pred eecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHH--H--cCCCceEEEEC
Confidence 44455666677788889999999999999999999998763 7999999999999 777775 2 24467888888
Q ss_pred cceeeecccCCCCCccCCccccchHHHHhhhhHH-H--------HHHHHHhhccCCcEEEEEeCCC
Q psy7769 226 GGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCE-I--------EIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 226 Da~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~--------lL~~A~~~LkpGG~lVYsTCSl 282 (355)
|+..++.+. -..+.......|....+..+...+ . -.+.|.++++++|...|+|||+
T Consensus 98 D~~~~~~~~-~D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~~~y~~ls~ 162 (299)
T 2h1r_A 98 DAIKTVFPK-FDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVGDSNYSRLTI 162 (299)
T ss_dssp -CCSSCCCC-CSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTSTTCCHHHH
T ss_pred chhhCCccc-CCEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCCCcchhHHHH
Confidence 875533220 000000000112222222111100 0 0156889999999999999987
No 110
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.71 E-value=1.6e-08 Score=92.92 Aligned_cols=127 Identities=9% Similarity=-0.062 Sum_probs=79.0
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccc--cccCcceEEEEEeccee-eecccCCCC
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYD--TVLDIHALKLVKVGGSV-VYSTCSLSP 238 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~--~~~g~~~v~~~~~Da~~-lDaPCSgsG 238 (355)
..++.+|||+|||+|..+..+|.......|+|+|+++.++ ++++++.++ ...+..|+.++.+|+.. ++... ..|
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~-~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFF-YKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHC-CTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhC-CCc
Confidence 4567799999999999999999877667899999999999 665554110 00234679999999864 32100 011
Q ss_pred CccCCc-cc----cchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhh
Q psy7769 239 IQNDGV-VH----MSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRI 298 (355)
Q Consensus 239 ~t~~~~-l~----~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~ 298 (355)
+.+.. +. |...+-......+ .+|+.+.++|||||.|+++|+ ++..+.++++..
T Consensus 123 -~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td------~~~~~~~~~~~l 181 (235)
T 3ckk_A 123 -QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD------VLELHDWMCTHF 181 (235)
T ss_dssp -CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES------CHHHHHHHHHHH
T ss_pred -CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC------CHHHHHHHHHHH
Confidence 11111 11 2111111111112 789999999999999999986 456666665543
No 111
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.71 E-value=3.5e-08 Score=85.99 Aligned_cols=114 Identities=11% Similarity=-0.045 Sum_probs=76.5
Q ss_pred hhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceee
Q psy7769 153 GASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVV 230 (355)
Q Consensus 153 ~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~l 230 (355)
.........+...++.+|||+|||+|..+..++.. ..+|+++|+++.++ +++++. . .+..++.+...|...+
T Consensus 19 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~--~--~~~~~~~~~~~d~~~~ 92 (199)
T 2xvm_A 19 RTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKS--I--ENLDNLHTRVVDLNNL 92 (199)
T ss_dssp CCCHHHHHHTTTSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH--H--HTCTTEEEEECCGGGC
T ss_pred cccHHHHHHhhccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHH--h--CCCCCcEEEEcchhhC
Confidence 33445566677778899999999999999999887 36999999999999 777765 2 2444688888887543
Q ss_pred ecccCCCCCccCCccccchHHHHhhh--hHHHHHHHHHhhccCCcEEEEEe
Q psy7769 231 YSTCSLSPIQNDGVVHMSLKRIWEET--GCEIEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 231 DaPCSgsG~t~~~~l~~~~~~l~~l~--~lQ~lL~~A~~~LkpGG~lVYsT 279 (355)
+.+ + .. ++.+...-+..+. ....+|+++.++|||||.+++.+
T Consensus 93 ~~~----~-~~--D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 93 TFD----R-QY--DFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CCC----C-CE--EEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCC----C-Cc--eEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 210 1 10 1000000011111 22378999999999999987754
No 112
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.71 E-value=1.4e-08 Score=94.88 Aligned_cols=118 Identities=15% Similarity=0.066 Sum_probs=81.8
Q ss_pred chhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCC-CcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 152 DGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYP-DYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 152 D~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~-g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
+..+.+.-.++.+.++.+|||+|||+|..+..++...+. .+|+++|+++.++ +++++. . .+ .++.+...|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~--~--~~-~~v~~~~~d~~ 82 (284)
T 3gu3_A 8 DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFR--L--LP-YDSEFLEGDAT 82 (284)
T ss_dssp HHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHH--S--SS-SEEEEEESCTT
T ss_pred HHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH--h--cC-CceEEEEcchh
Confidence 334445555567788999999999999999999987653 7999999999999 777766 2 22 27889998876
Q ss_pred eeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 229 VVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 229 ~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
.+..+ + +. ++.+...-+......+.+|+++.++|||||.++..+..
T Consensus 83 ~~~~~----~-~f--D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 83 EIELN----D-KY--DIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp TCCCS----S-CE--EEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcCcC----C-Ce--eEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 42211 1 11 11111111122223347899999999999999988776
No 113
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.70 E-value=4.1e-08 Score=93.75 Aligned_cols=109 Identities=15% Similarity=0.004 Sum_probs=78.3
Q ss_pred echhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc
Q psy7769 151 MDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG 227 (355)
Q Consensus 151 QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da 227 (355)
|..-.......+++++|++|||+|||+|..+..+++... .++|+++|+++.++ ++++++ . .+..++.+...|+
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~--~--~g~~~v~~~~~d~ 135 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVE--R--LGIENVIFVCGDG 135 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH--H--TTCCSEEEEESCG
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCCeEEEECCh
Confidence 334445566677889999999999999999999998875 37899999999999 777876 3 3556688888887
Q ss_pred ee-------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 228 SV-------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 228 ~~-------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
.. .|.-.+..+ +. .+...+.+.|||||+++.+..+.
T Consensus 136 ~~~~~~~~~fD~Iv~~~~------~~-------------~~~~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 136 YYGVPEFSPYDVIFVTVG------VD-------------EVPETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp GGCCGGGCCEEEEEECSB------BS-------------CCCHHHHHHEEEEEEEEEEBCBG
T ss_pred hhccccCCCeEEEEEcCC------HH-------------HHHHHHHHhcCCCcEEEEEECCC
Confidence 54 222221111 00 11245677999999999985443
No 114
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.70 E-value=4.4e-08 Score=91.12 Aligned_cols=110 Identities=14% Similarity=0.080 Sum_probs=77.4
Q ss_pred HHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccC
Q psy7769 159 VLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCS 235 (355)
Q Consensus 159 ~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCS 235 (355)
...+.+.+|.+|||+|||+|..+..+++..+ .+|+++|+++.++ +++++. . .+. .++.+...|...+ |
T Consensus 57 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~--~--~~~~~~~~~~~~d~~~~--~-- 127 (287)
T 1kpg_A 57 LGKLGLQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVA--N--SENLRSKRVLLAGWEQF--D-- 127 (287)
T ss_dssp HTTTTCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHH--T--CCCCSCEEEEESCGGGC--C--
T ss_pred HHHcCCCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHH--h--cCCCCCeEEEECChhhC--C--
Confidence 4455678999999999999999999996553 5999999999999 777776 2 233 4688888887532 2
Q ss_pred CCCCccCCccccchHHHHhh--hhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 236 LSPIQNDGVVHMSLKRIWEE--TGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 236 gsG~t~~~~l~~~~~~l~~l--~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+ +.+.- +...-+..+ .....+|+++.++|||||+++.++...
T Consensus 128 --~-~fD~v--~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 128 --E-PVDRI--VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp --C-CCSEE--EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred --C-CeeEE--EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 1 11111 111112222 123378999999999999999988765
No 115
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.68 E-value=8.3e-08 Score=82.14 Aligned_cols=133 Identities=14% Similarity=0.102 Sum_probs=87.7
Q ss_pred hhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceee
Q psy7769 153 GASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVV 230 (355)
Q Consensus 153 ~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~l 230 (355)
.-.......+.+.++.+|||+|||+|..+..++. ...+|+++|+++.++ +++++. . .+..++.+...|...
T Consensus 22 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~~~~~~d~~~- 94 (183)
T 2yxd_A 22 EIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLA--K--FNIKNCQIIKGRAED- 94 (183)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHH--H--TTCCSEEEEESCHHH-
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHH--H--cCCCcEEEEECCccc-
Confidence 3344555666788999999999999999999988 457999999999999 778877 3 344678888888754
Q ss_pred ecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccCceEEEec
Q psy7769 231 YSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKD 310 (355)
Q Consensus 231 DaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~ 310 (355)
..|- + ..+--+.... .....+++.+.++ |||.+++++|+. ++-..+...+++ .|+.++.+.
T Consensus 95 ~~~~---~-~~D~i~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~~~---~~~~~~~~~l~~----~g~~~~~~~ 155 (183)
T 2yxd_A 95 VLDK---L-EFNKAFIGGT------KNIEKIIEILDKK--KINHIVANTIVL---ENAAKIINEFES----RGYNVDAVN 155 (183)
T ss_dssp HGGG---C-CCSEEEECSC------SCHHHHHHHHHHT--TCCEEEEEESCH---HHHHHHHHHHHH----TTCEEEEEE
T ss_pred cccC---C-CCcEEEECCc------ccHHHHHHHHhhC--CCCEEEEEeccc---ccHHHHHHHHHH----cCCeEEEEE
Confidence 1111 0 0000010111 1223778888887 999999999875 233334444543 456666554
Q ss_pred c
Q psy7769 311 L 311 (355)
Q Consensus 311 l 311 (355)
.
T Consensus 156 ~ 156 (183)
T 2yxd_A 156 V 156 (183)
T ss_dssp E
T ss_pred e
Confidence 3
No 116
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.68 E-value=4.6e-08 Score=90.90 Aligned_cols=124 Identities=10% Similarity=0.019 Sum_probs=78.5
Q ss_pred cHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEeccee--
Q psy7769 155 SLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSV-- 229 (355)
Q Consensus 155 S~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~-- 229 (355)
+.+.+..+.+.++.+|||+|||+|..+..++.......|+++|+++.++ +++|+..+.. .+. .++.+++.|...
T Consensus 25 ~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~-~~l~~~v~~~~~D~~~~~ 103 (260)
T 2ozv_A 25 AMLLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDN-AAFSARIEVLEADVTLRA 103 (260)
T ss_dssp HHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGG-TTTGGGEEEEECCTTCCH
T ss_pred HHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhh-CCCcceEEEEeCCHHHHh
Confidence 6677777788889999999999999999999987667999999999999 8888872000 122 357777777543
Q ss_pred -----------------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEe
Q psy7769 230 -----------------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 230 -----------------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsT 279 (355)
.++|....+-....+......+......+..+++.+.++|||||++++..
T Consensus 104 ~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 104 KARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp HHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 33333211100000000000000001123388999999999999999854
No 117
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.68 E-value=3.8e-08 Score=86.61 Aligned_cols=121 Identities=9% Similarity=0.038 Sum_probs=76.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeee-------ccc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVY-------STC 234 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lD-------aPC 234 (355)
+.++.+|||+|||+|..+..++.... ..|+++|+++.++ +++++. . ..++.+...|+..++ ...
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~--~----~~~i~~~~~d~~~~~~~~~~fD~v~ 112 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYA--H----VPQLRWETMDVRKLDFPSASFDVVL 112 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTT--T----CTTCEEEECCTTSCCSCSSCEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhcc--c----CCCcEEEEcchhcCCCCCCcccEEE
Confidence 47889999999999999999988743 3899999999999 666665 2 235677777765432 111
Q ss_pred CCCCC--ccCCc-cccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 235 SLSPI--QNDGV-VHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 235 SgsG~--t~~~~-l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
+.... ....+ ..|... ........++|+++.++|||||++++++.+. ......++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~-----~~~~~~~~~~ 172 (215)
T 2pxx_A 113 EKGTLDALLAGERDPWTVS-SEGVHTVDQVLSEVSRVLVPGGRFISMTSAA-----PHFRTRHYAQ 172 (215)
T ss_dssp EESHHHHHTTTCSCTTSCC-HHHHHHHHHHHHHHHHHEEEEEEEEEEESCC-----HHHHHHHHCC
T ss_pred ECcchhhhccccccccccc-cchhHHHHHHHHHHHHhCcCCCEEEEEeCCC-----cHHHHHHHhc
Confidence 00000 00000 012110 0111223389999999999999999998764 3344455543
No 118
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.67 E-value=2e-08 Score=88.62 Aligned_cols=101 Identities=12% Similarity=-0.017 Sum_probs=73.0
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccCC
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQNDG 243 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~~ 243 (355)
++.+|||+|||+|..+..++...+..+|+++|+++.++ +++++. . .+..++.+...|.....++ + . -
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~--~--~~~~~v~~~~~d~~~~~~~----~-~--~ 133 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQH--E--LKLENIEPVQSRVEEFPSE----P-P--F 133 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH--H--TTCSSEEEEECCTTTSCCC----S-C--E
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH--H--cCCCCeEEEecchhhCCcc----C-C--c
Confidence 58899999999999999999876668999999999999 778877 3 3555688888887542211 0 0 0
Q ss_pred ccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 244 VVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 244 ~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
++.+.. .......++..+.++|+|||.++.....
T Consensus 134 D~i~~~----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 134 DGVISR----AFASLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp EEEECS----CSSSHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred CEEEEe----ccCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 111100 0112237899999999999999997654
No 119
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.67 E-value=3.3e-08 Score=88.94 Aligned_cols=107 Identities=11% Similarity=0.058 Sum_probs=77.0
Q ss_pred EEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEec
Q psy7769 149 YCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVG 226 (355)
Q Consensus 149 ~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~D 226 (355)
+.+..........+.+.++.+|||+|||+|..+..++... ++|+++|+++.++ +++++. . .+ ++.+...|
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~--~--~~--~v~~~~~d 124 (231)
T 1vbf_A 53 TTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLS--Y--YN--NIKLILGD 124 (231)
T ss_dssp ECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHT--T--CS--SEEEEESC
T ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHh--h--cC--CeEEEECC
Confidence 3344444456667788899999999999999999999876 7999999999999 777777 3 23 68888888
Q ss_pred cee-------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 227 GSV-------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 227 a~~-------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+.. .|.-.+..+ +. .+...+.+.|||||++++++.+-
T Consensus 125 ~~~~~~~~~~fD~v~~~~~------~~-------------~~~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 125 GTLGYEEEKPYDRVVVWAT------AP-------------TLLCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GGGCCGGGCCEEEEEESSB------BS-------------SCCHHHHHTEEEEEEEEEEECSS
T ss_pred cccccccCCCccEEEECCc------HH-------------HHHHHHHHHcCCCcEEEEEEcCC
Confidence 753 222111110 00 12346788999999999997654
No 120
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.67 E-value=6.4e-08 Score=90.13 Aligned_cols=111 Identities=6% Similarity=-0.036 Sum_probs=84.5
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEeccee-------eec
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSV-------VYS 232 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~-------lDa 232 (355)
-+.+|++|||+|||+|..++.++.....++|+|+|+++..+ +++|++ . .|. .+|.+..+|+.. +|+
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~--~--~gl~~~I~v~~gD~l~~~~~~~~~D~ 93 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVR--S--SGLTEQIDVRKGNGLAVIEKKDAIDT 93 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHH--H--TTCTTTEEEEECSGGGGCCGGGCCCE
T ss_pred hCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH--H--cCCCceEEEEecchhhccCccccccE
Confidence 35689999999999999999999876557899999999999 899998 3 355 358999999753 222
Q ss_pred cc-CCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhh
Q psy7769 233 TC-SLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRI 298 (355)
Q Consensus 233 PC-SgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~ 298 (355)
-. .|.| .+ .+.+||..+...|+++|++|.+.- .+...|..+|.++
T Consensus 94 IviagmG----------g~------lI~~IL~~~~~~L~~~~~lIlq~~-----~~~~~lr~~L~~~ 139 (244)
T 3gnl_A 94 IVIAGMG----------GT------LIRTILEEGAAKLAGVTKLILQPN-----IAAWQLREWSEQN 139 (244)
T ss_dssp EEEEEEC----------HH------HHHHHHHHTGGGGTTCCEEEEEES-----SCHHHHHHHHHHH
T ss_pred EEEeCCc----------hH------HHHHHHHHHHHHhCCCCEEEEEcC-----CChHHHHHHHHHC
Confidence 21 1111 01 112899999999999999998763 4788888888864
No 121
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.66 E-value=5.1e-08 Score=88.88 Aligned_cols=108 Identities=14% Similarity=-0.079 Sum_probs=73.2
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCC
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLS 237 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgs 237 (355)
..+...++.+|||+|||+|..+..++.... ..|+++|+++.++ +++++. ..++.+...|...++.+-
T Consensus 38 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~--- 106 (253)
T 3g5l_A 38 KMLPDFNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIEDIAIEP--- 106 (253)
T ss_dssp TTCCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGGCCCCT---
T ss_pred HhhhccCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhhCCCCC---
Confidence 344556899999999999999999988752 3899999999999 555554 235788888875432211
Q ss_pred CCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 238 PIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 238 G~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
+ + -++.+...-+..+...+++|+++.++|||||.++.++.+
T Consensus 107 ~-~--fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 107 D-A--YNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp T-C--EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred C-C--eEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 0 0 011111111222233448899999999999999998643
No 122
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.66 E-value=3.1e-08 Score=89.94 Aligned_cols=108 Identities=11% Similarity=0.077 Sum_probs=78.2
Q ss_pred EechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc
Q psy7769 150 CMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG 227 (355)
Q Consensus 150 ~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da 227 (355)
.+..........+.+.+|++|||+|||+|..+..++...+ ++|+++|+++.++ +++++. . .+..++.+...|+
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~--~--~~~~~v~~~~~d~ 149 (235)
T 1jg1_A 75 SAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLE--R--AGVKNVHVILGDG 149 (235)
T ss_dssp CCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHH--H--TTCCSEEEEESCG
T ss_pred ccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHH--H--cCCCCcEEEECCc
Confidence 3444445566677889999999999999999999998876 7999999999999 777776 3 3555688888886
Q ss_pred ee-------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 228 SV-------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 228 ~~-------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
.. .|.-.+..+ + +.+...+.+.|||||+++.++-.
T Consensus 150 ~~~~~~~~~fD~Ii~~~~------~-------------~~~~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 150 SKGFPPKAPYDVIIVTAG------A-------------PKIPEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp GGCCGGGCCEEEEEECSB------B-------------SSCCHHHHHTEEEEEEEEEEECS
T ss_pred ccCCCCCCCccEEEECCc------H-------------HHHHHHHHHhcCCCcEEEEEEec
Confidence 21 222221111 0 02234678899999999998754
No 123
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.66 E-value=7.3e-08 Score=85.14 Aligned_cols=104 Identities=12% Similarity=-0.094 Sum_probs=72.8
Q ss_pred HHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh-HHhhccccccccCcceEEEEEecceee------e
Q psy7769 159 VLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV-LALNIRPYDTVLDIHALKLVKVGGSVV------Y 231 (355)
Q Consensus 159 ~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl-l~~~l~r~~~~~g~~~v~~~~~Da~~l------D 231 (355)
..+....++.+|||+|||+|..+..++... .+|+++|+++.++ ..+. . +..++.++..|...+ |
T Consensus 39 ~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~-~------~~~~~~~~~~d~~~~~~~~~~D 109 (218)
T 3ou2_A 39 ERLRAGNIRGDVLELASGTGYWTRHLSGLA--DRVTALDGSAEMIAEAGR-H------GLDNVEFRQQDLFDWTPDRQWD 109 (218)
T ss_dssp HHHTTTTSCSEEEEESCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHGG-G------CCTTEEEEECCTTSCCCSSCEE
T ss_pred HHHhcCCCCCeEEEECCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHh-c------CCCCeEEEecccccCCCCCcee
Confidence 333347788899999999999999999873 6999999999998 3222 2 234678888887543 2
Q ss_pred cccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 232 STCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 232 aPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
.-.+... +.+-++ ..+..+|+++.++|||||.+++++.+.
T Consensus 110 ~v~~~~~------l~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 110 AVFFAHW------LAHVPD-----DRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp EEEEESC------GGGSCH-----HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEEech------hhcCCH-----HHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 2221111 111111 012378999999999999999998876
No 124
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.66 E-value=9.3e-08 Score=85.96 Aligned_cols=103 Identities=16% Similarity=0.052 Sum_probs=71.0
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeec--ccCCCC
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYS--TCSLSP 238 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDa--PCSgsG 238 (355)
+.+|++|||+|||+|..+..++...+ .++|+++|+++.++ ++++++ . . .++.++..|+...+. +.. +
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~--~--~--~~v~~~~~d~~~~~~~~~~~--~ 142 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVE--E--R--RNIVPILGDATKPEEYRALV--P 142 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHS--S--C--TTEEEEECCTTCGGGGTTTC--C
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHh--c--c--CCCEEEEccCCCcchhhccc--C
Confidence 67899999999999999999998764 48999999999998 777776 3 1 568888888754221 110 0
Q ss_pred CccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeC
Q psy7769 239 IQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 239 ~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTC 280 (355)
+.+.-+...+ ..... .++.++.++|||||+++++.+
T Consensus 143 -~~D~v~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 143 -KVDVIFEDVA-----QPTQAKILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp -CEEEEEECCC-----STTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CceEEEECCC-----CHhHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 0000010000 01111 459999999999999999843
No 125
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.65 E-value=7.9e-08 Score=86.50 Aligned_cols=110 Identities=12% Similarity=-0.084 Sum_probs=74.5
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeeccc
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTC 234 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPC 234 (355)
.....+...++.+|||+|||+|..+..++... ..+|+++|+++.++ ++++.. . .++.+...|...++.+-
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~--~-----~~~~~~~~d~~~~~~~~ 105 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGP--D-----TGITYERADLDKLHLPQ 105 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSC--S-----SSEEEEECCGGGCCCCT
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhcc--c-----CCceEEEcChhhccCCC
Confidence 34556666789999999999999999998873 24899999999999 666655 2 25778888875432110
Q ss_pred CCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeC
Q psy7769 235 SLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 235 SgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTC 280 (355)
+ .-++.+...-+........+|+++.++|||||++++++.
T Consensus 106 ---~---~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 106 ---D---SFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp ---T---CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---C---CceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 0 001111111122222334889999999999999999873
No 126
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.65 E-value=3.9e-08 Score=92.37 Aligned_cols=115 Identities=10% Similarity=-0.037 Sum_probs=76.7
Q ss_pred CCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCC-
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPI- 239 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~- 239 (355)
..++.+|||+|||+|..+..+++.. ...+|+++|+++.++ ++++++ .......++.++..|+..++.+-. .++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~--~~~~~~~~v~~~~~d~~~~~~~~~-~~~~ 110 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKE--GSPDTYKNVSFKISSSDDFKFLGA-DSVD 110 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHH--HCC-CCTTEEEEECCTTCCGGGCT-TTTT
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHH--hccCCCCceEEEEcCHHhCCcccc-cccc
Confidence 4589999999999999999999865 568999999999999 777766 210123578999999865433210 000
Q ss_pred ccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 240 QNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 240 t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
...-++.+...-+..+ ....+|.++.++|||||.|++.+++.
T Consensus 111 ~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~ 152 (299)
T 3g5t_A 111 KQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYAD 152 (299)
T ss_dssp SSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 0011111111112222 33488999999999999999866553
No 127
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.64 E-value=3.6e-08 Score=87.71 Aligned_cols=105 Identities=11% Similarity=0.068 Sum_probs=75.5
Q ss_pred hcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-
Q psy7769 154 ASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV- 229 (355)
Q Consensus 154 aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~- 229 (355)
........+.+.+|.+|||+|||+|..+..++...+ .++|+++|+++.++ +++++. . .+..++.+...|+..
T Consensus 65 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~v~~~~~d~~~~ 140 (215)
T 2yxe_A 65 MVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLR--K--LGYDNVIVIVGDGTLG 140 (215)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH--H--HTCTTEEEEESCGGGC
T ss_pred HHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH--H--cCCCCeEEEECCcccC
Confidence 334555667888999999999999999999998873 37999999999999 777776 3 345568888888632
Q ss_pred ------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 230 ------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 230 ------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
.|.-.+..+ +. .+...+.++|||||+++.++.+
T Consensus 141 ~~~~~~fD~v~~~~~------~~-------------~~~~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 141 YEPLAPYDRIYTTAA------GP-------------KIPEPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp CGGGCCEEEEEESSB------BS-------------SCCHHHHHTEEEEEEEEEEESS
T ss_pred CCCCCCeeEEEECCc------hH-------------HHHHHHHHHcCCCcEEEEEECC
Confidence 222221111 00 1234778899999999998754
No 128
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.64 E-value=1.8e-08 Score=90.90 Aligned_cols=108 Identities=13% Similarity=0.068 Sum_probs=75.9
Q ss_pred echhcHHHHHhh--CCCCCCeEeeecccCcchHHHHHHhcC------CCcEEEEcCCchhh--HHhhccccccccC----
Q psy7769 151 MDGASLLPVLAL--NIRPYDTVLDMCAAPGGKTLVALQTLY------PDYYCMDGASLLPV--LALNIRPYDTVLD---- 216 (355)
Q Consensus 151 QD~aS~l~~~~L--~~~pG~~VLD~CAgPGgKT~~la~~~~------~g~V~AvD~s~~Rl--l~~~l~r~~~~~g---- 216 (355)
|..........| .+++|++|||+|||+|..+..+++..+ .++|+++|+++.++ +++++. . .+
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~ 142 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLN--T--DDRSML 142 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHH--H--HHHHHH
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHH--h--cCcccc
Confidence 333334445555 578999999999999999999998654 36999999999999 777776 3 23
Q ss_pred -cceEEEEEeccee-------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 217 -IHALKLVKVGGSV-------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 217 -~~~v~~~~~Da~~-------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
..++.+...|+.. .|.-.+..+ +..+++++.+.|||||+++.++-.
T Consensus 143 ~~~~v~~~~~d~~~~~~~~~~fD~I~~~~~-------------------~~~~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 143 DSGQLLIVEGDGRKGYPPNAPYNAIHVGAA-------------------APDTPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp HHTSEEEEESCGGGCCGGGCSEEEEEECSC-------------------BSSCCHHHHHTEEEEEEEEEEESC
T ss_pred CCCceEEEECCcccCCCcCCCccEEEECCc-------------------hHHHHHHHHHHhcCCCEEEEEEec
Confidence 4578888888753 222211111 002356788999999999998654
No 129
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.63 E-value=7.7e-08 Score=87.59 Aligned_cols=103 Identities=11% Similarity=0.031 Sum_probs=70.8
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCc
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQ 240 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t 240 (355)
.+.++.+|||+|||+|..+..++... +.|+++|+++.++ +++++. .+..++.+...|+..+..+- + +
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~~~~d~~~~~~~~---~-~ 104 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARG--YRYIALDADAAMLEVFRQKIA-----GVDRKVQVVQADARAIPLPD---E-S 104 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTT--CEEEEEESCHHHHHHHHHHTT-----TSCTTEEEEESCTTSCCSCT---T-C
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCC--CEEEEEECCHHHHHHHHHHhh-----ccCCceEEEEcccccCCCCC---C-C
Confidence 56789999999999999999998763 7899999999999 666663 23356888888875432110 0 0
Q ss_pred cCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEE
Q psy7769 241 NDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYS 278 (355)
Q Consensus 241 ~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYs 278 (355)
-++.+...-+........+|+++.++|||||.++.+
T Consensus 105 --fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 105 --VHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp --EEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred --eeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 011111011111122237899999999999999987
No 130
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.63 E-value=8.5e-08 Score=85.55 Aligned_cols=104 Identities=11% Similarity=0.027 Sum_probs=72.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-----ceEEEEEecceee------
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-----HALKLVKVGGSVV------ 230 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-----~~v~~~~~Da~~l------ 230 (355)
++++.+|||+|||+|..+..++... .+|+++|+++.++ +++++. . .+. .++.+...|...+
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--~--~~~~~~~~~~~~~~~~d~~~~~~~~~~ 101 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKG--YSVTGIDINSEAIRLAETAAR--S--PGLNQKTGGKAEFKVENASSLSFHDSS 101 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTT--C--CSCCSSSSCEEEEEECCTTSCCSCTTC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHH--h--cCCccccCcceEEEEecccccCCCCCc
Confidence 4578999999999999999998873 6999999999999 777776 2 222 3678888887542
Q ss_pred -ecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 231 -YSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 231 -DaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
|.-++... +.+-+ .......+|+.+.++|||||+++.++....
T Consensus 102 ~D~v~~~~~------l~~~~----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 102 FDFAVMQAF------LTSVP----DPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp EEEEEEESC------GGGCC----CHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred eeEEEEcch------hhcCC----CHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 22221110 11110 001112789999999999999999987653
No 131
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.63 E-value=9.1e-08 Score=86.81 Aligned_cols=109 Identities=11% Similarity=-0.083 Sum_probs=75.1
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCC
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLS 237 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgs 237 (355)
..+...++.+|||+|||+|..+..++... ...|+++|+++.++ +++++. . . .++.+...|...++.+-
T Consensus 87 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~--~---~-~~~~~~~~d~~~~~~~~--- 156 (254)
T 1xtp_A 87 ASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELA--G---M-PVGKFILASMETATLPP--- 156 (254)
T ss_dssp HTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTT--T---S-SEEEEEESCGGGCCCCS---
T ss_pred HhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhc--c---C-CceEEEEccHHHCCCCC---
Confidence 34456788999999999999999998876 46799999999999 777766 2 1 56888888875432221
Q ss_pred CCccCCccccchHHHHhh--hhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 238 PIQNDGVVHMSLKRIWEE--TGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 238 G~t~~~~l~~~~~~l~~l--~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
+ .-++.+...-+..+ .....+|+++.++|||||++++++..
T Consensus 157 ~---~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 199 (254)
T 1xtp_A 157 N---TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENC 199 (254)
T ss_dssp S---CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred C---CeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 0 00111111112222 12238899999999999999999853
No 132
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.62 E-value=6.8e-08 Score=91.02 Aligned_cols=44 Identities=23% Similarity=0.076 Sum_probs=39.2
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcc
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
+|.+|||+|||+|..+..++...+..+|+++|+++.++ +++++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~ 91 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIR 91 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence 68899999999999999999987668999999999999 777766
No 133
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.62 E-value=2e-08 Score=91.10 Aligned_cols=103 Identities=17% Similarity=0.062 Sum_probs=71.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceee---------ec
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVV---------YS 232 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~l---------Da 232 (355)
++++.+|||+|||+|..+..++... ..+|+++|+|+.++ ++++.+ . .+ .++.++.+|+..+ |.
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~--~--~~-~~v~~~~~d~~~~~~~~~~~~fD~ 131 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAP--R--QT-HKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGG--G--CS-SEEEEEESCHHHHGGGSCTTCEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHH--h--cC-CCeEEEecCHHHhhcccCCCceEE
Confidence 5789999999999999999886643 24899999999999 777776 2 23 5788888886543 32
Q ss_pred ccC-CCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 233 TCS-LSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 233 PCS-gsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
..+ ..+. .... ........+++++.++|||||++++.+++
T Consensus 132 V~~d~~~~--------~~~~-~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 132 ILYDTYPL--------SEET-WHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp EEECCCCC--------BGGG-TTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred EEECCccc--------chhh-hhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 221 1110 0000 01112227799999999999999998765
No 134
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.62 E-value=5.7e-08 Score=88.00 Aligned_cols=69 Identities=14% Similarity=0.002 Sum_probs=55.5
Q ss_pred hcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecce
Q psy7769 154 ASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGS 228 (355)
Q Consensus 154 aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~ 228 (355)
+..++..+....+|.+|||+|||+|+.+..++... ++|+|+|+++.++ ++++++ . .+. .++.++.+|+.
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~--~--~~~~~~~~~~~~d~~ 137 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAE--V--YGIADKIEFICGDFL 137 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHH--H--TTCGGGEEEEESCHH
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHH--H--cCCCcCeEEEECChH
Confidence 45555555566689999999999999999999875 8999999999999 888887 3 344 47888887764
No 135
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.62 E-value=9.7e-08 Score=86.57 Aligned_cols=102 Identities=14% Similarity=0.002 Sum_probs=72.9
Q ss_pred hhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceee--------
Q psy7769 161 ALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVV-------- 230 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~l-------- 230 (355)
...+.++.+|||+|||+|..+..++.... +|+++|+++.++ +++++. . .++.++..|...+
T Consensus 51 ~~~~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~--~-----~~~~~~~~d~~~~~~~~~~~~ 121 (245)
T 3ggd_A 51 ELLFNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT--A-----ANISYRLLDGLVPEQAAQIHS 121 (245)
T ss_dssp TTTSCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC--C-----TTEEEEECCTTCHHHHHHHHH
T ss_pred hhccCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc--c-----cCceEEECccccccccccccc
Confidence 33467899999999999999999998763 899999999999 666554 1 3678888887652
Q ss_pred ----ecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 231 ----YSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 231 ----DaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
|.-++... +++-+. ...+.+|+++.+.|||||+++.+..+.
T Consensus 122 ~~~~d~v~~~~~------~~~~~~-----~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 122 EIGDANIYMRTG------FHHIPV-----EKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp HHCSCEEEEESS------STTSCG-----GGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred ccCccEEEEcch------hhcCCH-----HHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 22221110 111111 122378999999999999998887754
No 136
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.62 E-value=2.2e-08 Score=94.58 Aligned_cols=80 Identities=14% Similarity=0.017 Sum_probs=62.6
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEE
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVK 224 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~ 224 (355)
|..+.......+..+++.++++|||+|||+|..|..+++.. ++|+|+|+++.++ +++++. . .+. .+++++.
T Consensus 10 fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~v~~~~ 83 (285)
T 1zq9_A 10 ILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQ--G--TPVASKLQVLV 83 (285)
T ss_dssp EECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHT--T--STTGGGEEEEE
T ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHH--h--cCCCCceEEEE
Confidence 33344445566777888999999999999999999999875 6999999999999 777776 3 233 5789999
Q ss_pred ecceeeecc
Q psy7769 225 VGGSVVYST 233 (355)
Q Consensus 225 ~Da~~lDaP 233 (355)
+|+..++.|
T Consensus 84 ~D~~~~~~~ 92 (285)
T 1zq9_A 84 GDVLKTDLP 92 (285)
T ss_dssp SCTTTSCCC
T ss_pred cceecccch
Confidence 998654443
No 137
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.61 E-value=9.8e-08 Score=82.42 Aligned_cols=112 Identities=13% Similarity=0.058 Sum_probs=69.4
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccC-CCCC
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCS-LSPI 239 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCS-gsG~ 239 (355)
..++.+|||+|||+|..+..++.. +..+|+++|+++.++ +++++. . .+. .++.++..|+........ ..+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~~~~~~~d~~~~~~~~~~~~~- 115 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIA--I--TKEPEKFEVRKMDANRALEQFYEEKL- 115 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHH--H--HTCGGGEEEEESCHHHHHHHHHHTTC-
T ss_pred hcCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHH--H--hCCCcceEEEECcHHHHHHHHHhcCC-
Confidence 457899999999999999988874 336899999999999 777876 3 233 468888888643111000 000
Q ss_pred ccCCccccchHHHHhhhhHHHHHHH--HHhhccCCcEEEEEeCCCCC
Q psy7769 240 QNDGVVHMSLKRIWEETGCEIEIKH--ALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 240 t~~~~l~~~~~~l~~l~~lQ~lL~~--A~~~LkpGG~lVYsTCSl~~ 284 (355)
..+- +...+- . ........+.. +.++|+|||.+++++|+-..
T Consensus 116 ~fD~-i~~~~~-~-~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 116 QFDL-VLLDPP-Y-AKQEIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp CEEE-EEECCC-G-GGCCHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred CCCE-EEECCC-C-CchhHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 0000 000000 0 00011123333 38899999999999988754
No 138
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.61 E-value=1.3e-07 Score=92.51 Aligned_cols=122 Identities=8% Similarity=-0.016 Sum_probs=80.2
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCCCC-
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLSPI- 239 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgsG~- 239 (355)
+.+|.+|||+|||+|+.+..++.....++|+++|+++.++ +++|+. . .|. .++.+.+.|+..+..+-...++
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~--~--~gl~~~i~~~~~D~~~~~~~~~~fD~I 290 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNAL--A--AGVLDKIKFIQGDATQLSQYVDSVDFA 290 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHH--H--TTCGGGCEEEECCGGGGGGTCSCEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH--H--cCCCCceEEEECChhhCCcccCCcCEE
Confidence 7889999999999999999999887556999999999999 888887 3 354 5688888887542221100000
Q ss_pred ccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 240 QNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 240 t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
...............+..+. ++++.+.+.| ||.++|.||+ ...+...+.+
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~------~~~~~~~~~~ 341 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE------KKAIEEAIAE 341 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC------HHHHHHHHHH
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC------HHHHHHHHHH
Confidence 00000000011112233444 8889999988 7899999984 4566666654
No 139
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.61 E-value=9.7e-08 Score=91.56 Aligned_cols=125 Identities=17% Similarity=0.085 Sum_probs=80.0
Q ss_pred cHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhccccc------ccc-CcceEEEEE
Q psy7769 155 SLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYD------TVL-DIHALKLVK 224 (355)
Q Consensus 155 S~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~------~~~-g~~~v~~~~ 224 (355)
....+..+++.+|++|||+|||+|..+..++...+ .++|+++|+++.++ +++++.++. .+. ...++.+..
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 44556677899999999999999999999998754 48999999999999 777766210 000 024688888
Q ss_pred ecceeeecccCCCCCccCCcc-c-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHH
Q psy7769 225 VGGSVVYSTCSLSPIQNDGVV-H-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLK 296 (355)
Q Consensus 225 ~Da~~lDaPCSgsG~t~~~~l-~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~ 296 (355)
.|+.....+.. .+ ..+.-+ . ..+. .++.++.+.|||||+++..+. +...+..+++
T Consensus 174 ~d~~~~~~~~~-~~-~fD~V~~~~~~~~---------~~l~~~~~~LkpgG~lv~~~~------~~~~~~~~~~ 230 (336)
T 2b25_A 174 KDISGATEDIK-SL-TFDAVALDMLNPH---------VTLPVFYPHLKHGGVCAVYVV------NITQVIELLD 230 (336)
T ss_dssp SCTTCCC---------EEEEEECSSSTT---------TTHHHHGGGEEEEEEEEEEES------SHHHHHHHHH
T ss_pred CChHHcccccC-CC-CeeEEEECCCCHH---------HHHHHHHHhcCCCcEEEEEeC------CHHHHHHHHH
Confidence 88653211110 00 000000 0 0011 358899999999999995543 3345555554
No 140
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.60 E-value=2.2e-07 Score=82.27 Aligned_cols=111 Identities=9% Similarity=-0.069 Sum_probs=74.9
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------eeccc
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------VYSTC 234 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------lDaPC 234 (355)
.+.++.+|||+|||+|..+..++... ..|+++|+++.++ +++++. +.+...|... +|...
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~----------~~~~~~d~~~~~~~~~fD~v~ 107 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAAG--FDVDATDGSPELAAEASRRLG----------RPVRTMLFHQLDAIDAYDAVW 107 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHT----------SCCEECCGGGCCCCSCEEEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHcC--CeEEEECCCHHHHHHHHHhcC----------CceEEeeeccCCCCCcEEEEE
Confidence 45689999999999999999998873 6999999999998 555542 1233344332 23322
Q ss_pred CCCCCccCCccc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCC-----------CCHHHHHHHHHh
Q psy7769 235 SLSPIQNDGVVH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPI-----------QNDGVVHMSLKR 297 (355)
Q Consensus 235 SgsG~t~~~~l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~-----------ENE~vV~~~L~~ 297 (355)
+... +. +..+ ..+.+|+++.++|||||+++.+++..... -+.+.+..+|++
T Consensus 108 ~~~~------l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 170 (211)
T 3e23_A 108 AHAC------LLHVPRD------ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAE 170 (211)
T ss_dssp ECSC------GGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHH
T ss_pred ecCc------hhhcCHH------HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHh
Confidence 1111 11 1111 22378999999999999999997765432 256677777765
No 141
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.60 E-value=6.1e-08 Score=91.54 Aligned_cols=114 Identities=10% Similarity=-0.034 Sum_probs=75.7
Q ss_pred hhCCCCCCeEeeecccCcchHHHHH-HhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCC
Q psy7769 161 ALNIRPYDTVLDMCAAPGGKTLVAL-QTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSL 236 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAgPGgKT~~la-~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSg 236 (355)
...+.++.+|||+|||+|..+..++ .....++|+++|+++.++ +++++. . .+. .++.++..|+..+..+.+-
T Consensus 113 ~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~~f 188 (305)
T 3ocj_A 113 QRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAA--G--HALAGQITLHRQDAWKLDTREGY 188 (305)
T ss_dssp HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHT--T--STTGGGEEEEECCGGGCCCCSCE
T ss_pred HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHH--h--cCCCCceEEEECchhcCCccCCe
Confidence 3346789999999999999999886 334457999999999999 888887 3 344 3589999998653322100
Q ss_pred CCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 237 SPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 237 sG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
..+.....+.+-++. ....++|+++.++|||||+++.++.+.
T Consensus 189 D~v~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 189 DLLTSNGLNIYEPDD----ARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEEECCSSGGGCCCH----HHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred EEEEECChhhhcCCH----HHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 000000001111110 011168999999999999999987553
No 142
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.60 E-value=6.5e-08 Score=93.42 Aligned_cols=120 Identities=14% Similarity=0.069 Sum_probs=83.0
Q ss_pred chhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee
Q psy7769 152 DGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV 229 (355)
Q Consensus 152 D~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~ 229 (355)
|..+.+....+.+.++.+|||+|||+|..+..++......+|+++|+++.++ +++++. . .+. ++.+...|...
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~--~--~~~-~~~~~~~d~~~ 256 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLA--A--NGV-EGEVFASNVFS 256 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHH--H--TTC-CCEEEECSTTT
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH--H--hCC-CCEEEEccccc
Confidence 5567777777877788899999999999999999887667999999999999 777776 2 222 23556666532
Q ss_pred -----eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 230 -----VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
+|.-.+.. .+++... .......++++.+.+.|||||.++..+.+..+
T Consensus 257 ~~~~~fD~Iv~~~------~~~~g~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 308 (343)
T 2pjd_A 257 EVKGRFDMIISNP------PFHDGMQ--TSLDAAQTLIRGAVRHLNSGGELRIVANAFLP 308 (343)
T ss_dssp TCCSCEEEEEECC------CCCSSSH--HHHHHHHHHHHHHGGGEEEEEEEEEEEETTSS
T ss_pred cccCCeeEEEECC------CcccCcc--CCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCC
Confidence 22222110 0111100 01112238999999999999999999887754
No 143
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.59 E-value=8.4e-08 Score=85.31 Aligned_cols=106 Identities=14% Similarity=0.061 Sum_probs=71.1
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCC
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLS 237 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgs 237 (355)
..+.+.++.+|||+|||+|..+..++... ..|+++|+++.++ +++++. .++.+...|+..+..+
T Consensus 39 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~~~~~~---- 104 (220)
T 3hnr_A 39 EDVVNKSFGNVLEFGVGTGNLTNKLLLAG--RTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFLSFEVP---- 104 (220)
T ss_dssp HHHHHTCCSEEEEECCTTSHHHHHHHHTT--CEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSSSCCCC----
T ss_pred HHhhccCCCeEEEeCCCCCHHHHHHHhCC--CeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChhhcCCC----
Confidence 33445689999999999999999998873 7999999999998 555443 2356677776543322
Q ss_pred CCccCCccccchHHHHhhhhHH--HHHHHHHhhccCCcEEEEEeCCC
Q psy7769 238 PIQNDGVVHMSLKRIWEETGCE--IEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 238 G~t~~~~l~~~~~~l~~l~~lQ--~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+ +.+. .+...-+..+...+ .+|+++.++|||||.++.++...
T Consensus 105 ~-~fD~--v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 105 T-SIDT--IVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp S-CCSE--EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred C-CeEE--EEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 1 1111 11111111122222 58999999999999999998655
No 144
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.59 E-value=6.7e-08 Score=89.73 Aligned_cols=102 Identities=18% Similarity=0.059 Sum_probs=71.5
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceee----
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVV---- 230 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~l---- 230 (355)
.....+.+.++.+|||+|||+|..+..++. ..+.|+++|+++.++ +++++. ++.+...|+..+
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~---------~~~~~~~d~~~~~~~~ 116 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYP---------HLHFDVADARNFRVDK 116 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCT---------TSCEEECCTTTCCCSS
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCC---------CCEEEECChhhCCcCC
Confidence 345666788999999999999999999988 347999999999999 555443 234566665432
Q ss_pred --ecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 231 --YSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 231 --DaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
|...+... +.| +.....+|+++.++|||||+++.++...
T Consensus 117 ~fD~v~~~~~------l~~-------~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 117 PLDAVFSNAM------LHW-------VKEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp CEEEEEEESC------GGG-------CSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CcCEEEEcch------hhh-------CcCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 22221111 112 1223378999999999999999987653
No 145
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.59 E-value=8.6e-08 Score=89.16 Aligned_cols=105 Identities=9% Similarity=0.012 Sum_probs=72.3
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCCCCccC
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLSPIQND 242 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgsG~t~~ 242 (355)
++.+|||+|||+|..+..++.. ...|+++|+++.++ +++++. . .+. .++.++..|...+...- .+ +
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~--~~-~-- 136 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAE--A--KGVSDNMQFIHCAAQDVASHL--ET-P-- 136 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH--C---CCGGGEEEEESCGGGTGGGC--SS-C--
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHH--h--cCCCcceEEEEcCHHHhhhhc--CC-C--
Confidence 4789999999999999999887 37999999999999 777776 3 344 57889998875432100 00 0
Q ss_pred CccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 243 GVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 243 ~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
-++.+...-+........+|+++.++|||||+++.++..
T Consensus 137 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 137 VDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred ceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 011111111222223347899999999999999998763
No 146
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.59 E-value=7.4e-08 Score=89.51 Aligned_cols=112 Identities=6% Similarity=-0.229 Sum_probs=70.7
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccc---------cc----cccCcceEEEEEecc
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRP---------YD----TVLDIHALKLVKVGG 227 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r---------~~----~~~g~~~v~~~~~Da 227 (355)
.+.++.+|||++||+|.-+..||+.+ ..|+|+|+|+.++ ++++... .. +.....++.+.++|+
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~G--~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADRG--HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHTT--CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHCC--CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 45688999999999999999999874 5899999999999 5444320 00 000124688999998
Q ss_pred eeeeccc-CCCCCccCCc-cccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 228 SVVYSTC-SLSPIQNDGV-VHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 228 ~~lDaPC-SgsG~t~~~~-l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
..++.+- ..+-+..... +.+-+. ...+..++++.++|||||+++..|..
T Consensus 143 ~~l~~~~~~~FD~V~~~~~l~~l~~-----~~~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 143 FDLPRANIGKFDRIWDRGALVAINP-----GDHDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp TTGGGGCCCCEEEEEESSSTTTSCG-----GGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ccCCcccCCCEEEEEEhhhhhhCCH-----HHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 6543321 0000000000 111111 11227899999999999999876644
No 147
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.59 E-value=4.1e-08 Score=91.43 Aligned_cols=111 Identities=11% Similarity=0.006 Sum_probs=74.8
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-----
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV----- 229 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~----- 229 (355)
+....+...++.+|||+|||+|..+..++... .+|+++|+|+.++ +++++..........++.+...|...
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 125 (293)
T 3thr_A 48 WLLGLLRQHGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV 125 (293)
T ss_dssp HHHHHHHHTTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS
T ss_pred HHHHHhcccCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccc
Confidence 44455566788999999999999999998874 5999999999999 66655210100122456777776533
Q ss_pred -----eecccC-CCCCccCCccccchHHHHhhhh-------HHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 230 -----VYSTCS-LSPIQNDGVVHMSLKRIWEETG-------CEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 230 -----lDaPCS-gsG~t~~~~l~~~~~~l~~l~~-------lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
.|.-.+ |.. +..+.. ...+|+++.++|||||+++.+++..
T Consensus 126 ~~~~~fD~V~~~g~~-------------l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 126 PAGDGFDAVICLGNS-------------FAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp CCTTCEEEEEECTTC-------------GGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred ccCCCeEEEEEcChH-------------HhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 332221 111 111112 2388999999999999999998763
No 148
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.58 E-value=1e-07 Score=86.29 Aligned_cols=110 Identities=14% Similarity=0.030 Sum_probs=77.4
Q ss_pred cHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeee
Q psy7769 155 SLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVY 231 (355)
Q Consensus 155 S~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lD 231 (355)
.......+++.+|++|||+|||+|..+..++.. .++|+++|+++.++ +++++. . .+. .++.+...|.....
T Consensus 80 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 80 SFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLK--K--FNLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHH--H--TTCCTTEEEECSCTTTSC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHH--H--cCCCCcEEEEEcChhhcc
Confidence 346666778889999999999999999999987 48999999999999 777776 3 243 46788777764311
Q ss_pred cccCCCCCccCCcccc-chHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 232 STCSLSPIQNDGVVHM-SLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 232 aPCSgsG~t~~~~l~~-~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
.+ . + .-++.+ ... ....+++++.++|+|||+++..+.+.
T Consensus 154 ~~--~-~---~~D~v~~~~~------~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 154 VP--E-G---IFHAAFVDVR------EPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp CC--T-T---CBSEEEECSS------CGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred cC--C-C---cccEEEECCc------CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 00 0 0 011111 000 11156889999999999999988654
No 149
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.57 E-value=2.3e-07 Score=92.62 Aligned_cols=118 Identities=11% Similarity=-0.007 Sum_probs=75.4
Q ss_pred HHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccc---cccCc--ceEEEEEecceee
Q psy7769 158 PVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYD---TVLDI--HALKLVKVGGSVV 230 (355)
Q Consensus 158 ~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~---~~~g~--~~v~~~~~Da~~l 230 (355)
++..+++++|++|||+|||.|..++.+|...+..+|+|+|+++.++ +++++++++ ...|. .+|.++++|+..+
T Consensus 165 il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~l 244 (438)
T 3uwp_A 165 MIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSE 244 (438)
T ss_dssp HHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSH
T ss_pred HHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCC
Confidence 3456688999999999999999999999765545699999999988 544432100 00233 5799999998653
Q ss_pred eccc--CCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 231 YSTC--SLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 231 DaPC--SgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+.+- ...-+..-....|.+ .+.+.|.+.++.|||||+||.+-...
T Consensus 245 p~~d~~~~aDVVf~Nn~~F~p-------dl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 245 EWRERIANTSVIFVNNFAFGP-------EVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp HHHHHHHTCSEEEECCTTCCH-------HHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred ccccccCCccEEEEcccccCc-------hHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 3210 000000000011222 22255778889999999999764433
No 150
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.56 E-value=1.6e-07 Score=86.98 Aligned_cols=109 Identities=14% Similarity=0.076 Sum_probs=73.4
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCCCCc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLSPIQ 240 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgsG~t 240 (355)
+.++.+|||+|||+|..+..++... .+.|+++|+++.++ +++++. . .+. .++.++..|......+. .+ .
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~--~~-~ 133 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRAR--N--MKRRFKVFFRAQDSYGRHMDL--GK-E 133 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHH--T--SCCSSEEEEEESCTTTSCCCC--SS-C
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHH--h--cCCCccEEEEECCccccccCC--CC-C
Confidence 4688999999999999999988763 35899999999999 777776 3 233 46888888875432110 00 0
Q ss_pred cCCccccchHHH----HhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 241 NDGVVHMSLKRI----WEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 241 ~~~~l~~~~~~l----~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
-++.+....+ ........+|+++.++|||||+++.+++..
T Consensus 134 --fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 134 --FDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp --EEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred --cCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 0111000001 111222388999999999999999998763
No 151
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.56 E-value=6.4e-08 Score=85.25 Aligned_cols=111 Identities=15% Similarity=-0.022 Sum_probs=70.9
Q ss_pred hhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCC
Q psy7769 161 ALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSP 238 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG 238 (355)
+....++.+|||+|||+|..+..++... ..+|+++|+++.++ +++++. . .+ .++.+...|+..++.+- +
T Consensus 18 ~~~~~~~~~vLDiGcG~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~--~--~~-~~~~~~~~d~~~~~~~~---~ 88 (209)
T 2p8j_A 18 CNESNLDKTVLDCGAGGDLPPLSIFVED-GYKTYGIEISDLQLKKAENFSR--E--NN-FKLNISKGDIRKLPFKD---E 88 (209)
T ss_dssp HHHSSSCSEEEEESCCSSSCTHHHHHHT-TCEEEEEECCHHHHHHHHHHHH--H--HT-CCCCEEECCTTSCCSCT---T
T ss_pred HhccCCCCEEEEECCCCCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHH--h--cC-CceEEEECchhhCCCCC---C
Confidence 3345678999999999999866554332 36899999999999 666665 2 12 34677777765432111 0
Q ss_pred CccCCccccchHHHHhh--hhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 239 IQNDGVVHMSLKRIWEE--TGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 239 ~t~~~~l~~~~~~l~~l--~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
+ -++.+...-+..+ .....+++++.+.|||||.+++++.+..
T Consensus 89 -~--fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 89 -S--MSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp -C--EEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred -c--eeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 0 0010100001111 1223889999999999999999998763
No 152
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.56 E-value=9.8e-08 Score=86.59 Aligned_cols=107 Identities=13% Similarity=-0.103 Sum_probs=72.5
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQND 242 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~ 242 (355)
.++.+|||+|||+|..+..++... ...|+++|+++.++ +++++. . .+..++.+...|...++.+- + .
T Consensus 78 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~--~--~~~~~~~~~~~d~~~~~~~~---~---~ 146 (241)
T 2ex4_A 78 TGTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLG--E--EGKRVRNYFCCGLQDFTPEP---D---S 146 (241)
T ss_dssp CCCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTG--G--GGGGEEEEEECCGGGCCCCS---S---C
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhh--h--cCCceEEEEEcChhhcCCCC---C---C
Confidence 368899999999999999888765 46899999999999 777776 3 23456888888865432221 0 0
Q ss_pred CccccchHHHHhhhh--HHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 243 GVVHMSLKRIWEETG--CEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 243 ~~l~~~~~~l~~l~~--lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
-++.+...-+..+.. +..+|+.+.++|||||++++++...
T Consensus 147 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 147 YDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred EEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 111111111111111 2278999999999999999987543
No 153
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.56 E-value=9e-08 Score=93.76 Aligned_cols=115 Identities=11% Similarity=-0.047 Sum_probs=75.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh--HHhhcccccc---c-cCcceEEEEEecceeeec----
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV--LALNIRPYDT---V-LDIHALKLVKVGGSVVYS---- 232 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl--l~~~l~r~~~---~-~g~~~v~~~~~Da~~lDa---- 232 (355)
+.+|.+|||+|||+|..+..++... ..++|+++|+++.++ +++++++... . ....++.++..|...++.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 5689999999999999999999876 457999999999999 7777651100 0 112578999988765311
Q ss_pred ccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 233 TCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 233 PCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
|-. .+ .-++.+...-+........+|+++.++|||||.|++++...
T Consensus 161 ~~~-~~---~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 161 GVP-DS---SVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp CCC-TT---CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCC-CC---CEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 210 00 01111111111112223388999999999999999986544
No 154
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.55 E-value=1.5e-07 Score=89.71 Aligned_cols=100 Identities=10% Similarity=0.015 Sum_probs=65.8
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc------eEEEEEecce--------
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH------ALKLVKVGGS-------- 228 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~------~v~~~~~Da~-------- 228 (355)
.+|.+|||+|||+|+-+..++... .+.|+++|+|+.++ ++++.. . .+.. ++.+...|..
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~--~--~~~~~~~~~~~~~f~~~d~~~d~~~~~l 121 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYN--K--LNSGIKTKYYKFDYIQETIRSDTFVSSV 121 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHH--H--HCC----CCCEEEEEECCTTSSSHHHHH
T ss_pred CCCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHH--h--ccccccccccccchhhhhcccchhhhhh
Confidence 358899999999998777665532 36899999999999 666554 2 1111 2455555541
Q ss_pred -------eeecccCCCCCccCCcccc--chHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 229 -------VVYSTCSLSPIQNDGVVHM--SLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 229 -------~lDaPCSgsG~t~~~~l~~--~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
..|+.++... ++| .... .+.+|+++.++|||||+++.+|+.
T Consensus 122 ~~~~~~~~FD~V~~~~~------lhy~~~~~~------~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 122 REVFYFGKFNIIDWQFA------IHYSFHPRH------YATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp HTTCCSSCEEEEEEESC------GGGTCSTTT------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hccccCCCeeEEEECch------HHHhCCHHH------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 1344332221 222 2221 237899999999999999999874
No 155
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.55 E-value=1.6e-07 Score=92.63 Aligned_cols=113 Identities=18% Similarity=0.057 Sum_probs=77.8
Q ss_pred chhcHHHHHhh------CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEE
Q psy7769 152 DGASLLPVLAL------NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLV 223 (355)
Q Consensus 152 D~aS~l~~~~L------~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~ 223 (355)
|..+.+....+ ...+|.+|||+|||+|..+..++... .+|+++|+++.++ +++|+. . .+. ++.++
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g--~~V~gvDis~~al~~A~~n~~--~--~~~-~v~~~ 285 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMG--AEVVGVEDDLASVLSLQKGLE--A--NAL-KAQAL 285 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTT--CEEEEEESBHHHHHHHHHHHH--H--TTC-CCEEE
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHH--H--cCC-CeEEE
Confidence 44455444444 23478899999999999999999873 6999999999999 888887 3 232 25677
Q ss_pred Eeccee------------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 224 KVGGSV------------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 224 ~~Da~~------------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
..|+.. +++|....+ . ......+++++.+.+.|||||+++++++...+
T Consensus 286 ~~D~~~~~~~~~~fD~Ii~npp~~~~~-----------~--~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~ 345 (381)
T 3dmg_A 286 HSDVDEALTEEARFDIIVTNPPFHVGG-----------A--VILDVAQAFVNVAAARLRPGGVFFLVSNPFLK 345 (381)
T ss_dssp ECSTTTTSCTTCCEEEEEECCCCCTTC-----------S--SCCHHHHHHHHHHHHHEEEEEEEEEEECTTSC
T ss_pred EcchhhccccCCCeEEEEECCchhhcc-----------c--ccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCC
Confidence 776533 333331111 0 00111227899999999999999999887753
No 156
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.55 E-value=1.2e-07 Score=84.96 Aligned_cols=101 Identities=8% Similarity=-0.069 Sum_probs=69.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCcc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~ 241 (355)
..++.+|||+|||+|..+..++... ..|+++|+++.++ +++++. . ++.+...|...+.++. +.
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~-----~---~v~~~~~d~~~~~~~~-----~f 104 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLK-----D---GITYIHSRFEDAQLPR-----RY 104 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSC-----S---CEEEEESCGGGCCCSS-----CE
T ss_pred hcCCCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhh-----C---CeEEEEccHHHcCcCC-----cc
Confidence 4578899999999999999988765 4899999999999 666554 1 5778888865431111 10
Q ss_pred CCccccchHHHHhhhhHHHHHHHHH-hhccCCcEEEEEeCC
Q psy7769 242 DGVVHMSLKRIWEETGCEIEIKHAL-KLVKVGGSVVYSTCS 281 (355)
Q Consensus 242 ~~~l~~~~~~l~~l~~lQ~lL~~A~-~~LkpGG~lVYsTCS 281 (355)
++.+...-+..+.....+|+++. ++|||||+++.++..
T Consensus 105 --D~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 105 --DNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp --EEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred --cEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 11111111222223347899999 999999999998854
No 157
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.55 E-value=8.7e-08 Score=86.01 Aligned_cols=100 Identities=14% Similarity=0.069 Sum_probs=72.2
Q ss_pred HHHhh--CCCCCCeEeeecccCcchHHHHHHhcC-----CCcEEEEcCCchhh--HHhhccccccccC-----cceEEEE
Q psy7769 158 PVLAL--NIRPYDTVLDMCAAPGGKTLVALQTLY-----PDYYCMDGASLLPV--LALNIRPYDTVLD-----IHALKLV 223 (355)
Q Consensus 158 ~~~~L--~~~pG~~VLD~CAgPGgKT~~la~~~~-----~g~V~AvD~s~~Rl--l~~~l~r~~~~~g-----~~~v~~~ 223 (355)
....+ .+++|.+|||+|||+|..+..++.... .++|+++|+++.++ +++++. . .+ ..++.+.
T Consensus 70 ~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~--~--~~~~~~~~~~v~~~ 145 (227)
T 2pbf_A 70 SLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIK--R--DKPELLKIDNFKII 145 (227)
T ss_dssp HHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHH--H--HCGGGGSSTTEEEE
T ss_pred HHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHH--H--cCccccccCCEEEE
Confidence 33444 578999999999999999999998763 36999999999999 777776 3 23 3568888
Q ss_pred Eecceee-----------ecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeC
Q psy7769 224 KVGGSVV-----------YSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 224 ~~Da~~l-----------DaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTC 280 (355)
..|+... |.-.+..+ +..++..+.++|||||+++.++-
T Consensus 146 ~~d~~~~~~~~~~~~~~fD~I~~~~~-------------------~~~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 146 HKNIYQVNEEEKKELGLFDAIHVGAS-------------------ASELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp ECCGGGCCHHHHHHHCCEEEEEECSB-------------------BSSCCHHHHHHEEEEEEEEEEEE
T ss_pred ECChHhcccccCccCCCcCEEEECCc-------------------hHHHHHHHHHhcCCCcEEEEEEc
Confidence 8886531 21111100 00346788899999999998754
No 158
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.55 E-value=1.9e-07 Score=86.41 Aligned_cols=117 Identities=13% Similarity=0.066 Sum_probs=80.1
Q ss_pred cHHHHHhhC--CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-
Q psy7769 155 SLLPVLALN--IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV- 229 (355)
Q Consensus 155 S~l~~~~L~--~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~- 229 (355)
..+....+. +.+|.+|||+|||+|..+..++... .+|+++|+++.++ +++|+. . .+.. +.+...|...
T Consensus 107 t~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g--~~v~gvDi~~~~v~~a~~n~~--~--~~~~-v~~~~~d~~~~ 179 (254)
T 2nxc_A 107 TRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLG--GKALGVDIDPMVLPQAEANAK--R--NGVR-PRFLEGSLEAA 179 (254)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCGGGHHHHHHHHH--H--TTCC-CEEEESCHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhC--CeEEEEECCHHHHHHHHHHHH--H--cCCc-EEEEECChhhc
Confidence 334444432 5789999999999999999888764 3999999999999 788877 3 2333 6777776543
Q ss_pred -----eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 230 -----VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
.|.-.+. .... .+..++..+.++|||||+++.+.... +....+...+++
T Consensus 180 ~~~~~fD~Vv~n----------~~~~------~~~~~l~~~~~~LkpgG~lils~~~~---~~~~~v~~~l~~ 233 (254)
T 2nxc_A 180 LPFGPFDLLVAN----------LYAE------LHAALAPRYREALVPGGRALLTGILK---DRAPLVREAMAG 233 (254)
T ss_dssp GGGCCEEEEEEE----------CCHH------HHHHHHHHHHHHEEEEEEEEEEEEEG---GGHHHHHHHHHH
T ss_pred CcCCCCCEEEEC----------CcHH------HHHHHHHHHHHHcCCCCEEEEEeecc---CCHHHHHHHHHH
Confidence 1221100 0011 12378999999999999999987654 345566666654
No 159
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.55 E-value=1.4e-07 Score=85.46 Aligned_cols=105 Identities=16% Similarity=0.054 Sum_probs=69.3
Q ss_pred hCCCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeee-cccCCC
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVY-STCSLS 237 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lD-aPCSgs 237 (355)
+.+++|++|||+|||+|..+.++++.. ..++|+++|+++.++ +.++.+ . . .++.++.+|+...+ .|...
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~--~---~-~~v~~~~~d~~~~~~~~~~~- 145 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAK--K---R-TNIIPVIEDARHPHKYRMLI- 145 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHH--H---C-TTEEEECSCTTCGGGGGGGC-
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhh--c---c-CCeEEEEcccCChhhhcccC-
Confidence 357789999999999999999999886 348999999999877 555555 2 1 45778888775421 11100
Q ss_pred CCccCCccccc-hHHHHhhhhH-HHHHHHHHhhccCCcEEEEEeC
Q psy7769 238 PIQNDGVVHMS-LKRIWEETGC-EIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 238 G~t~~~~l~~~-~~~l~~l~~l-Q~lL~~A~~~LkpGG~lVYsTC 280 (355)
+ . -++.+. .. .... +.++.++.++|||||+++.++.
T Consensus 146 ~-~--~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 146 A-M--VDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp C-C--EEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-c--EEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 0 0 011000 00 0011 1568889999999999999543
No 160
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.55 E-value=2e-07 Score=84.08 Aligned_cols=114 Identities=9% Similarity=-0.045 Sum_probs=78.3
Q ss_pred CCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeee------cccCCCC
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVY------STCSLSP 238 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lD------aPCSgsG 238 (355)
+.+|||+|||+|..+..++.. ...|+++|+++.++ +++++. .. ....++.+...|...+. ...+...
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~--~~-~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 141 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYG--SS-PKAEYFSFVKEDVFTWRPTELFDLIFDYVF 141 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHT--TS-GGGGGEEEECCCTTTCCCSSCEEEEEEESS
T ss_pred CCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhh--cc-CCCcceEEEECchhcCCCCCCeeEEEEChh
Confidence 349999999999999988763 36899999999999 777776 21 12357899988876532 2221100
Q ss_pred CccCCccc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCC-------CHHHHHHHHHh
Q psy7769 239 IQNDGVVH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQ-------NDGVVHMSLKR 297 (355)
Q Consensus 239 ~t~~~~l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~E-------NE~vV~~~L~~ 297 (355)
+. +.++ ....+|+.+.++|||||+++..+.+..... ....+...|+.
T Consensus 142 ------l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 196 (235)
T 3lcc_A 142 ------FCAIEPE------MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVP 196 (235)
T ss_dssp ------TTTSCGG------GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGG
T ss_pred ------hhcCCHH------HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHH
Confidence 11 1111 222789999999999999998776654332 45677777764
No 161
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.55 E-value=1.1e-07 Score=89.19 Aligned_cols=111 Identities=15% Similarity=-0.030 Sum_probs=75.1
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc---ceEEEEEecceeeeccc
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI---HALKLVKVGGSVVYSTC 234 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~---~~v~~~~~Da~~lDaPC 234 (355)
..+.+.++ +|||+|||+|..+..++... .+|+++|+++.++ +++++. . .+. .++.++..|...++.+-
T Consensus 77 ~~~~~~~~-~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~~~v~~~~~d~~~~~~~~ 149 (299)
T 3g2m_A 77 TRTGPVSG-PVLELAAGMGRLTFPFLDLG--WEVTALELSTSVLAAFRKRLA--E--APADVRDRCTLVQGDMSAFALDK 149 (299)
T ss_dssp HHHCCCCS-CEEEETCTTTTTHHHHHTTT--CCEEEEESCHHHHHHHHHHHH--T--SCHHHHTTEEEEECBTTBCCCSC
T ss_pred HhhCCCCC-cEEEEeccCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHh--h--cccccccceEEEeCchhcCCcCC
Confidence 34444444 99999999999999998873 6899999999999 777776 3 232 46899999986532211
Q ss_pred CCCCCccCCccccchHHHHhhh--hHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 235 SLSPIQNDGVVHMSLKRIWEET--GCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 235 SgsG~t~~~~l~~~~~~l~~l~--~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
..+. +.....-+.... .+..+|+++.++|||||+|+.++....
T Consensus 150 -----~fD~-v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 150 -----RFGT-VVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp -----CEEE-EEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred -----CcCE-EEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 1110 100111111111 123889999999999999999988764
No 162
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.55 E-value=1.6e-07 Score=87.36 Aligned_cols=103 Identities=15% Similarity=-0.017 Sum_probs=72.2
Q ss_pred HHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------e
Q psy7769 159 VLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------V 230 (355)
Q Consensus 159 ~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------l 230 (355)
...+...++.+|||+|||+|..+..++... .+|+++|+++.++ +++++. . .+. ++.+...|... .
T Consensus 113 ~~~~~~~~~~~vLD~GcG~G~~~~~l~~~g--~~v~~vD~s~~~~~~a~~~~~--~--~~~-~~~~~~~d~~~~~~~~~f 185 (286)
T 3m70_A 113 VDAAKIISPCKVLDLGCGQGRNSLYLSLLG--YDVTSWDHNENSIAFLNETKE--K--ENL-NISTALYDINAANIQENY 185 (286)
T ss_dssp HHHHHHSCSCEEEEESCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHH--H--TTC-CEEEEECCGGGCCCCSCE
T ss_pred HHHhhccCCCcEEEECCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHH--H--cCC-ceEEEEeccccccccCCc
Confidence 344455589999999999999999999874 6999999999999 777776 3 243 68888888754 2
Q ss_pred ecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEe
Q psy7769 231 YSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 231 DaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsT 279 (355)
|...+... +.+-.. ..+..+|+++.++|||||.++..+
T Consensus 186 D~i~~~~~------~~~~~~-----~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 186 DFIVSTVV------FMFLNR-----ERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp EEEEECSS------GGGSCG-----GGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEEccc------hhhCCH-----HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 22221110 111111 122278999999999999977643
No 163
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.54 E-value=2.5e-07 Score=81.27 Aligned_cols=109 Identities=10% Similarity=-0.127 Sum_probs=74.0
Q ss_pred CCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceee-------ecccCCC
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVV-------YSTCSLS 237 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~l-------DaPCSgs 237 (355)
+.+|||+|||+|..+..++... .+|+++|+++.++ ++++.. ++.++..|+..+ |.-.+..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~---------~~~~~~~d~~~~~~~~~~fD~v~~~~ 110 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG--HQIEGLEPATRLVELARQTHP---------SVTFHHGTITDLSDSPKRWAGLLAWY 110 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT--CCEEEECCCHHHHHHHHHHCT---------TSEEECCCGGGGGGSCCCEEEEEEES
T ss_pred CCeEEEecCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhCC---------CCeEEeCcccccccCCCCeEEEEehh
Confidence 8899999999999999998873 6899999999998 555533 246667776442 2222111
Q ss_pred CCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCC------------CCCHHHHHHHHHh
Q psy7769 238 PIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSP------------IQNDGVVHMSLKR 297 (355)
Q Consensus 238 G~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~------------~ENE~vV~~~L~~ 297 (355)
. +.+-+ ......+|+++.++|||||.++.++..... .-....+...|++
T Consensus 111 ~------l~~~~-----~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 171 (203)
T 3h2b_A 111 S------LIHMG-----PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALET 171 (203)
T ss_dssp S------STTCC-----TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHH
T ss_pred h------HhcCC-----HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHH
Confidence 0 11111 012237899999999999999998866532 1235666667764
No 164
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.54 E-value=1.1e-07 Score=88.86 Aligned_cols=96 Identities=9% Similarity=0.012 Sum_probs=69.0
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhhHHhhccccccccCcceEEEEEeccee-------eecccCCCC
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPVLALNIRPYDTVLDIHALKLVKVGGSV-------VYSTCSLSP 238 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rll~~~l~r~~~~~g~~~v~~~~~Da~~-------lDaPCSgsG 238 (355)
.+.+|||+|||+|..+..++... .+|+|+|+|+.++ +..+ + ..++.+..+|+.. +|...++..
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml--~~a~--~----~~~v~~~~~~~e~~~~~~~sfD~v~~~~~ 108 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQI--RQAL--R----HPRVTYAVAPAEDTGLPPASVDVAIAAQA 108 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHH--HTCC--C----CTTEEEEECCTTCCCCCSSCEEEEEECSC
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhh--hhhh--h----cCCceeehhhhhhhcccCCcccEEEEeee
Confidence 46799999999999999998875 6899999999887 1122 1 1357888888754 444432221
Q ss_pred CccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCC
Q psy7769 239 IQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPI 285 (355)
Q Consensus 239 ~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ 285 (355)
++|.. .++.+.++.++|||||+|+..+.+....
T Consensus 109 ------~h~~~--------~~~~~~e~~rvLkpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 109 ------MHWFD--------LDRFWAELRRVARPGAVFAAVTYGLTRV 141 (257)
T ss_dssp ------CTTCC--------HHHHHHHHHHHEEEEEEEEEEEECCCBC
T ss_pred ------hhHhh--------HHHHHHHHHHHcCCCCEEEEEECCCCCC
Confidence 33432 1257899999999999999988776543
No 165
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.54 E-value=4.6e-08 Score=94.45 Aligned_cols=127 Identities=13% Similarity=0.081 Sum_probs=82.0
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCC-----CcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce-------
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYP-----DYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS------- 228 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~-----g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~------- 228 (355)
.+.++.+|||.|||+|+.+..++..+.. ..|+|+|+++..+ ++.|+. . .+. ++.+..+|..
T Consensus 127 ~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~--~--~g~-~~~i~~~D~l~~~~~~~ 201 (344)
T 2f8l_A 127 QKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGAD--L--QRQ-KMTLLHQDGLANLLVDP 201 (344)
T ss_dssp TTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHH--H--HTC-CCEEEESCTTSCCCCCC
T ss_pred CCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHH--h--CCC-CceEEECCCCCccccCC
Confidence 5678899999999999999999876532 6899999999999 666665 2 233 3556666542
Q ss_pred ----eeecccCCCCCccCCc--cccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEe-CCCCCCCCHHHHHHHHHh
Q psy7769 229 ----VVYSTCSLSPIQNDGV--VHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYST-CSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 229 ----~lDaPCSgsG~t~~~~--l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsT-CSl~~~ENE~vV~~~L~~ 297 (355)
..++|.+... ... .+|.+.........+ .++.++++.|+|||++++.+ .++...+....+...|.+
T Consensus 202 fD~Ii~NPPfg~~~---~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~ 275 (344)
T 2f8l_A 202 VDVVISDLPVGYYP---DDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKK 275 (344)
T ss_dssp EEEEEEECCCSEES---CHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHH
T ss_pred ccEEEECCCCCCcC---chhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHh
Confidence 2566651100 000 011111011122344 68999999999999999886 344444556666666654
No 166
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.54 E-value=2e-07 Score=83.93 Aligned_cols=104 Identities=13% Similarity=-0.059 Sum_probs=70.9
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCcc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~ 241 (355)
+.++.+|||+|||+|..+..++... .+|+++|+++.++ ++++.. ..++.++..|...++.+- + +
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~---~-~- 116 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTG--YKAVGVDISEVMIQKGKERGE-------GPDLSFIKGDLSSLPFEN---E-Q- 116 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHTTTC-------BTTEEEEECBTTBCSSCT---T-C-
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhcc-------cCCceEEEcchhcCCCCC---C-C-
Confidence 4588999999999999999999873 6899999999998 554433 245788888876532221 0 0
Q ss_pred CCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 242 DGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 242 ~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
-++.+...-+........+|+++.++|+|||+++.++...
T Consensus 117 -fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 117 -FEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp -EEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred -ccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 0111111111112223378999999999999999998544
No 167
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.53 E-value=2e-07 Score=93.16 Aligned_cols=63 Identities=19% Similarity=0.084 Sum_probs=52.1
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
..+++.++++|||+|||+|..+..+|.. .++|+|+|+++.++ +++|++ . .+..++.+..+|+.
T Consensus 280 ~~l~~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~--~--~~~~~v~f~~~d~~ 344 (433)
T 1uwv_A 280 EWLDVQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNAR--L--NGLQNVTFYHENLE 344 (433)
T ss_dssp HHHTCCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHH--H--TTCCSEEEEECCTT
T ss_pred HhhcCCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHH--H--cCCCceEEEECCHH
Confidence 4456778999999999999999999987 37999999999999 888887 3 35557888877763
No 168
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.53 E-value=2e-07 Score=87.52 Aligned_cols=104 Identities=18% Similarity=0.036 Sum_probs=68.2
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc---e---
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG---S--- 228 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da---~--- 228 (355)
.....+.+.+|.+|||+|||+|..+..+++.. +.|+|+|+|+.++ +++++. . ...+..+...+. .
T Consensus 36 ~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g--~~V~gvD~S~~ml~~Ar~~~~--~---~~v~~~~~~~~~~~~~~~~ 108 (261)
T 3iv6_A 36 NDIFLENIVPGSTVAVIGASTRFLIEKALERG--ASVTVFDFSQRMCDDLAEALA--D---RCVTIDLLDITAEIPKELA 108 (261)
T ss_dssp HHHHTTTCCTTCEEEEECTTCHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTS--S---SCCEEEECCTTSCCCGGGT
T ss_pred HHHHhcCCCCcCEEEEEeCcchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHH--h---ccceeeeeecccccccccC
Confidence 34556678899999999999999999999875 6899999999999 777776 3 111222222221 0
Q ss_pred -eeecccCCCCCccCCccc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeC
Q psy7769 229 -VVYSTCSLSPIQNDGVVH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 229 -~lDaPCSgsG~t~~~~l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTC 280 (355)
..|...+... ++ |..+ ....++..+.++| |||+|+.|..
T Consensus 109 ~~fD~Vv~~~~------l~~~~~~------~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 109 GHFDFVLNDRL------INRFTTE------EARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp TCCSEEEEESC------GGGSCHH------HHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred CCccEEEEhhh------hHhCCHH------HHHHHHHHHHHhC-cCcEEEEEec
Confidence 0222221111 11 2221 1226788999999 9999998754
No 169
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.53 E-value=3.2e-07 Score=84.45 Aligned_cols=122 Identities=11% Similarity=0.016 Sum_probs=77.1
Q ss_pred cHHHHHhhCCCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCch------hh--HHhhccccccccCc-ceEEEEE
Q psy7769 155 SLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLL------PV--LALNIRPYDTVLDI-HALKLVK 224 (355)
Q Consensus 155 S~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~------Rl--l~~~l~r~~~~~g~-~~v~~~~ 224 (355)
....+..+.+.+|.+|||+|||+|..+..++... ..++|+++|+++. ++ +++++. . .+. .++.+..
T Consensus 32 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~--~--~~~~~~v~~~~ 107 (275)
T 3bkx_A 32 RLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLL--A--GPLGDRLTVHF 107 (275)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHH--T--STTGGGEEEEC
T ss_pred HHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHH--h--cCCCCceEEEE
Confidence 3344556678899999999999999999999886 3489999999997 77 777776 3 233 5788888
Q ss_pred ec-ceeeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 225 VG-GSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 225 ~D-a~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
.| ....+.|.. .+ +. ++.+...-+........+++....+++|||+++.++.+...
T Consensus 108 ~d~~~~~~~~~~-~~-~f--D~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 108 NTNLSDDLGPIA-DQ-HF--DRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQP 164 (275)
T ss_dssp SCCTTTCCGGGT-TC-CC--SEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSC
T ss_pred CChhhhccCCCC-CC-CE--EEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 87 211122210 00 01 11111111111111224566666777789999998877643
No 170
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.53 E-value=1.4e-07 Score=82.93 Aligned_cols=102 Identities=10% Similarity=0.024 Sum_probs=70.5
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCcc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~ 241 (355)
..++ +|||+|||+|..+..++... ..|+++|+++.++ +++++. . .+. ++.+...|...++.+- + ..
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--~--~~~-~~~~~~~d~~~~~~~~---~-~f 95 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLG--YEVTAVDQSSVGLAKAKQLAQ--E--KGV-KITTVQSNLADFDIVA---D-AW 95 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHH--H--HTC-CEEEECCBTTTBSCCT---T-TC
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCC--CeEEEEECCHHHHHHHHHHHH--h--cCC-ceEEEEcChhhcCCCc---C-Cc
Confidence 5677 99999999999998888763 6999999999999 666665 2 222 5778877765432221 0 00
Q ss_pred CCc----cccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 242 DGV----VHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 242 ~~~----l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
+-- .++... ....+|+.+.++|||||.++.++.+..
T Consensus 96 D~v~~~~~~~~~~------~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 96 EGIVSIFCHLPSS------LRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp SEEEEECCCCCHH------HHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred cEEEEEhhcCCHH------HHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 100 112111 222789999999999999999987643
No 171
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.52 E-value=2.1e-07 Score=78.61 Aligned_cols=109 Identities=14% Similarity=0.076 Sum_probs=71.6
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh-HHhhccccccccCcceEEEEEec---------------
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV-LALNIRPYDTVLDIHALKLVKVG--------------- 226 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl-l~~~l~r~~~~~g~~~v~~~~~D--------------- 226 (355)
++++.+|||+|||+|..+..+++..+ .++|+++|+++ ++ + . ++.+...|
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-~------------~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-V------------GVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-T------------TEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-C------------cEEEEEcccccchhhhhhhccCC
Confidence 67899999999999999999998853 47999999998 55 3 1 12333333
Q ss_pred -----ceeeecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 227 -----GSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 227 -----a~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
....+.|+...|. + .........++ .+++.+.++|+|||.++.++... ++...+...+..
T Consensus 86 ~~~~D~i~~~~~~~~~~~-------~-~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~---~~~~~~~~~~~~ 151 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGT-------P-AVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG---EGFDEYLREIRS 151 (180)
T ss_dssp TCCEEEEEECCCCCCCSC-------H-HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS---TTHHHHHHHHHH
T ss_pred CCceeEEEECCCccccCC-------C-ccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC---CcHHHHHHHHHH
Confidence 3334444433331 0 11111122233 88999999999999999876543 555556556654
No 172
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.52 E-value=1.3e-07 Score=80.40 Aligned_cols=99 Identities=17% Similarity=0.080 Sum_probs=66.6
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-----------eec
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV-----------VYS 232 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~-----------lDa 232 (355)
++.+|||+|||+|..+..++.... .|+++|+++.++ +++++. . .+. ++.+.+.|+.. +|.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~--~--~~~-~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVR--R--TGL-GARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHH--H--HTC-CCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHH--H--cCC-ceEEEeccHHHHHHhhhccCCceEE
Confidence 788999999999999999998753 499999999999 777776 2 233 56777666533 111
Q ss_pred ccCCCCCccCCccccchHHHHhhhhHHHHHHHH--HhhccCCcEEEEEeCCCCCCC
Q psy7769 233 TCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHA--LKLVKVGGSVVYSTCSLSPIQ 286 (355)
Q Consensus 233 PCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A--~~~LkpGG~lVYsTCSl~~~E 286 (355)
-.+.. . +. . ...++++.. .++|||||.+++++++.....
T Consensus 114 i~~~~------~--~~-~------~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~~~ 154 (171)
T 1ws6_A 114 AFMAP------P--YA-M------DLAALFGELLASGLVEAGGLYVLQHPKDLYLP 154 (171)
T ss_dssp EEECC------C--TT-S------CTTHHHHHHHHHTCEEEEEEEEEEEETTSCCT
T ss_pred EEECC------C--Cc-h------hHHHHHHHHHhhcccCCCcEEEEEeCCccCCc
Confidence 11000 0 11 0 011334444 499999999999888775544
No 173
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.52 E-value=1.9e-07 Score=84.80 Aligned_cols=106 Identities=13% Similarity=0.050 Sum_probs=69.9
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCc
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQ 240 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t 240 (355)
...++.+|||+|||+|..+..++... ..|+++|+|+.++ +++++. . .+. ++.++..|...++.+- .
T Consensus 38 ~~~~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~--~--~~~-~v~~~~~d~~~~~~~~-----~ 105 (252)
T 1wzn_A 38 AKREVRRVLDLACGTGIPTLELAERG--YEVVGLDLHEEMLRVARRKAK--E--RNL-KIEFLQGDVLEIAFKN-----E 105 (252)
T ss_dssp CSSCCCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHH--H--TTC-CCEEEESCGGGCCCCS-----C
T ss_pred cccCCCEEEEeCCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHH--h--cCC-ceEEEECChhhcccCC-----C
Confidence 34678899999999999999998863 6899999999999 777765 2 222 5778888875432211 0
Q ss_pred cCCccc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeC
Q psy7769 241 NDGVVH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 241 ~~~~l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTC 280 (355)
.+--+. +............++|+++.++|||||.++..+.
T Consensus 106 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 106 FDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 000000 0000000011223889999999999999998653
No 174
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.51 E-value=1.1e-07 Score=84.61 Aligned_cols=107 Identities=11% Similarity=0.035 Sum_probs=71.0
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCcc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~ 241 (355)
+.++.+|||+|||+|..+..++... .+|+++|+++.++ +++++. . .+ .++.++..|...++.+- + ..
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--~--~~-~~~~~~~~d~~~~~~~~---~-~~ 104 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYG--FEVVGVDISEDMIRKAREYAK--S--RE-SNVEFIVGDARKLSFED---K-TF 104 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHH--H--TT-CCCEEEECCTTSCCSCT---T-CE
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHH--h--cC-CCceEEECchhcCCCCC---C-cE
Confidence 3458899999999999999888875 3999999999999 777765 2 22 56788888875432110 0 00
Q ss_pred CCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 242 DGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 242 ~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
+--+....-.........++|+++.++|||||+++..++.
T Consensus 105 D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 105 DYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 0000000000111112237899999999999999998775
No 175
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.51 E-value=1.7e-07 Score=93.78 Aligned_cols=95 Identities=14% Similarity=0.082 Sum_probs=66.8
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce------
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS------ 228 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~------ 228 (355)
+...++.+.++++|||+|||+|..+..+|... .+|+++|+++.++ +++|++ . .+.. +.+..+|+.
T Consensus 281 l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~~--~~V~gvD~s~~ai~~A~~n~~--~--ngl~-v~~~~~d~~~~~~~~ 353 (425)
T 2jjq_A 281 LVRKVSELVEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVE--I--NNVD-AEFEVASDREVSVKG 353 (425)
T ss_dssp HHHHHHHHCCSSEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHH--H--HTCC-EEEEECCTTTCCCTT
T ss_pred HHHHhhccCCCCEEEEeeccchHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHH--H--cCCc-EEEEECChHHcCccC
Confidence 33444446789999999999999999999864 6899999999999 888887 3 2444 677766653
Q ss_pred ----eeecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeC
Q psy7769 229 ----VVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 229 ----~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTC 280 (355)
.+|+|..|.. +.+..+++.++||| ++|.+|
T Consensus 354 fD~Vv~dPPr~g~~---------------------~~~~~~l~~l~p~g-ivyvsc 387 (425)
T 2jjq_A 354 FDTVIVDPPRAGLH---------------------PRLVKRLNREKPGV-IVYVSC 387 (425)
T ss_dssp CSEEEECCCTTCSC---------------------HHHHHHHHHHCCSE-EEEEES
T ss_pred CCEEEEcCCccchH---------------------HHHHHHHHhcCCCc-EEEEEC
Confidence 3677764332 11223334589976 566677
No 176
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.49 E-value=1.7e-06 Score=74.47 Aligned_cols=117 Identities=12% Similarity=-0.048 Sum_probs=74.3
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCC-Cc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSP-IQ 240 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG-~t 240 (355)
+.++.+|||+|||+|..+..++... ..|+++|+++.++ +++++. ++.+...|...++.+....- +.
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~---------~~~~~~~d~~~~~~~~~~~D~i~ 112 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQG--HDVLGTDLDPILIDYAKQDFP---------EARWVVGDLSVDQISETDFDLIV 112 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTSCCCCCCEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCC--CcEEEEcCCHHHHHHHHHhCC---------CCcEEEcccccCCCCCCceeEEE
Confidence 4688999999999999999998873 6899999999998 666554 13556666543221110000 00
Q ss_pred cCCc-cccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 241 NDGV-VHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 241 ~~~~-l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
...+ +.+... .....+|..+.++|+|||.+++++..... -....+...+++
T Consensus 113 ~~~~~~~~~~~-----~~~~~~l~~~~~~l~~~G~l~~~~~~~~~-~~~~~~~~~l~~ 164 (195)
T 3cgg_A 113 SAGNVMGFLAE-----DGREPALANIHRALGADGRAVIGFGAGRG-WVFGDFLEVAER 164 (195)
T ss_dssp ECCCCGGGSCH-----HHHHHHHHHHHHHEEEEEEEEEEEETTSS-CCHHHHHHHHHH
T ss_pred ECCcHHhhcCh-----HHHHHHHHHHHHHhCCCCEEEEEeCCCCC-cCHHHHHHHHHH
Confidence 0000 111100 11227899999999999999998765432 345556666654
No 177
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.47 E-value=3.9e-07 Score=91.43 Aligned_cols=101 Identities=10% Similarity=-0.007 Sum_probs=72.9
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--H-------HhhccccccccC--cceEEEEEecce
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--L-------ALNIRPYDTVLD--IHALKLVKVGGS 228 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l-------~~~l~r~~~~~g--~~~v~~~~~Da~ 228 (355)
..+++++|++|||+|||+|..+..+|...+..+|+++|+++..+ + ++++. . .| ..++.++.+|+.
T Consensus 236 ~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~--~--~Gl~~~nV~~i~gD~~ 311 (433)
T 1u2z_A 236 QQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCK--L--YGMRLNNVEFSLKKSF 311 (433)
T ss_dssp HHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHH--H--TTBCCCCEEEEESSCS
T ss_pred HhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHH--H--cCCCCCceEEEEcCcc
Confidence 45678899999999999999999999877556899999999988 5 66666 3 35 467888887654
Q ss_pred e-----------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEE
Q psy7769 229 V-----------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYS 278 (355)
Q Consensus 229 ~-----------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYs 278 (355)
. .|+..++.- + +. ..+...|..+.+.|||||+||.+
T Consensus 312 ~~~~~~~~~~~~FDvIvvn~~------l-~~-------~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 312 VDNNRVAELIPQCDVILVNNF------L-FD-------EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp TTCHHHHHHGGGCSEEEECCT------T-CC-------HHHHHHHHHHHTTCCTTCEEEES
T ss_pred ccccccccccCCCCEEEEeCc------c-cc-------ccHHHHHHHHHHhCCCCeEEEEe
Confidence 2 111111000 0 11 12236788999999999999987
No 178
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.47 E-value=1.5e-07 Score=91.06 Aligned_cols=114 Identities=18% Similarity=0.051 Sum_probs=76.3
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceee------
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVV------ 230 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~l------ 230 (355)
..+.+.+|.+|||+|||+|..+..+++.. ..+|+|+|+++ ++ ++++++ . .+. .++.++.+|+..+
T Consensus 58 ~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~--~--~~~~~~i~~~~~d~~~~~~~~~~ 131 (340)
T 2fyt_A 58 QNPHIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIR--L--NKLEDTITLIKGKIEEVHLPVEK 131 (340)
T ss_dssp HCGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHH--H--TTCTTTEEEEESCTTTSCCSCSC
T ss_pred hhhhhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHH--H--cCCCCcEEEEEeeHHHhcCCCCc
Confidence 34456789999999999999999888873 35899999996 77 777776 3 243 5788998887543
Q ss_pred -ecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC--CCCCHH
Q psy7769 231 -YSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS--PIQNDG 289 (355)
Q Consensus 231 -DaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~--~~ENE~ 289 (355)
|.-.|. |-..-+.....+..+|..+.++|||||+++.+.|++. +.++..
T Consensus 132 ~D~Ivs~----------~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~ 183 (340)
T 2fyt_A 132 VDVIISE----------WMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVAVSDVN 183 (340)
T ss_dssp EEEEEEC----------CCBTTBTTTCHHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHH
T ss_pred EEEEEEc----------CchhhccCHHHHHHHHHHHHhhcCCCcEEEcccceEEEEEecchh
Confidence 322211 1000011111233789999999999999996555442 345544
No 179
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.46 E-value=2.2e-07 Score=83.55 Aligned_cols=104 Identities=11% Similarity=0.019 Sum_probs=69.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCcc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~ 241 (355)
+.++.+|||+|||+|..+..++.. .+|+++|+++.++ +++++. . .+ .++.+...|...++.+- ..
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~--~--~~-~~~~~~~~d~~~~~~~~-----~f 97 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAM--E--TN-RHVDFWVQDMRELELPE-----PV 97 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHH--H--TT-CCCEEEECCGGGCCCSS-----CE
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhh--h--cC-CceEEEEcChhhcCCCC-----Cc
Confidence 456789999999999999888766 6999999999999 777665 2 12 35678888865432210 00
Q ss_pred CCccccc-hHHHHhh---hhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 242 DGVVHMS-LKRIWEE---TGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 242 ~~~l~~~-~~~l~~l---~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
++.+. ...+..+ .....+|+++.++|||||+++.++.+.
T Consensus 98 --D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 98 --DAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp --EEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred --CEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCH
Confidence 00000 0011111 122378999999999999999877653
No 180
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.46 E-value=1.3e-07 Score=80.78 Aligned_cols=100 Identities=8% Similarity=-0.011 Sum_probs=69.2
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce----eeecc
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS----VVYST 233 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~----~lDaP 233 (355)
..+.+.++.+|||+|||+|..+..++... .+|+++|+++.++ ++++.. ++.+...|.. ..|.-
T Consensus 11 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~---------~v~~~~~d~~~~~~~~D~v 79 (170)
T 3i9f_A 11 PNIFEGKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEKFD---------SVITLSDPKEIPDNSVDFI 79 (170)
T ss_dssp HHHHSSCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHHCT---------TSEEESSGGGSCTTCEEEE
T ss_pred HhcCcCCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHhCC---------CcEEEeCCCCCCCCceEEE
Confidence 34457789999999999999999999877 4999999999988 555422 3455555510 02322
Q ss_pred cCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 234 CSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 234 CSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
.+... +......+.+|+++.+.|||||+++.++....
T Consensus 80 ~~~~~-------------l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 80 LFANS-------------FHDMDDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp EEESC-------------STTCSCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred EEccc-------------hhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 21111 11112233789999999999999999976654
No 181
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.44 E-value=3.1e-07 Score=84.59 Aligned_cols=110 Identities=12% Similarity=0.062 Sum_probs=72.2
Q ss_pred HHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhhHHhhccccccccCcceEEEEEecceeeecccC
Q psy7769 156 LLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPVLALNIRPYDTVLDIHALKLVKVGGSVVYSTCS 235 (355)
Q Consensus 156 ~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rll~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCS 235 (355)
......+.+.++.+|||+|||+|..+..+++. ..+|+++|+|+.++ ...+ . . .++.+...|+..+..+-
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~--~~a~--~---~-~~~~~~~~d~~~~~~~~- 92 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGGYSVALANQ--GLFVYAVEPSIVMR--QQAV--V---H-PQVEWFTGYAENLALPD- 92 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSHHHHHHHTT--TCEEEEECSCHHHH--HSSC--C---C-TTEEEECCCTTSCCSCT-
T ss_pred HHHHHHhCCCCCCEEEEEcCcccHHHHHHHhC--CCEEEEEeCCHHHH--HHHH--h---c-cCCEEEECchhhCCCCC-
Confidence 34455667788999999999999999999873 37999999999877 1122 1 0 15778888875432211
Q ss_pred CCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 236 LSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 236 gsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+ + -++.+...-+........+|+++.+.|| ||.++..++..
T Consensus 93 --~-~--fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 93 --K-S--VDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp --T-C--BSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred --C-C--EeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 1 1 1111111112222333488999999999 99998888763
No 182
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.43 E-value=2.8e-07 Score=82.72 Aligned_cols=102 Identities=14% Similarity=0.019 Sum_probs=69.3
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccCC
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQNDG 243 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~~ 243 (355)
++.+|||+|||+|..+..+++.. .+|+++|+++.++ +++++. . .+. ++.+...|...++.+. . -
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~s~~~~~~a~~~~~--~--~~~-~~~~~~~d~~~~~~~~-----~--f 102 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKF--KNTWAVDLSQEMLSEAENKFR--S--QGL-KPRLACQDISNLNINR-----K--F 102 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGS--SEEEEECSCHHHHHHHHHHHH--H--TTC-CCEEECCCGGGCCCSC-----C--E
T ss_pred CCCeEEEeCCCCCHHHHHHHHCC--CcEEEEECCHHHHHHHHHHHh--h--cCC-CeEEEecccccCCccC-----C--c
Confidence 78899999999999999988774 6899999999999 666665 2 222 5677777765432220 0 0
Q ss_pred ccccchH-HHHhh---hhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 244 VVHMSLK-RIWEE---TGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 244 ~l~~~~~-~l~~l---~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
++.+... -+..+ .....+|+++.++|||||.++.++..
T Consensus 103 D~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred eEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 0111111 12222 22338899999999999999986643
No 183
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.43 E-value=2.8e-07 Score=79.86 Aligned_cols=120 Identities=14% Similarity=0.001 Sum_probs=73.6
Q ss_pred hhcHHHHHhhCC--CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh-HHhhccccccccCcceEEEEEeccee
Q psy7769 153 GASLLPVLALNI--RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV-LALNIRPYDTVLDIHALKLVKVGGSV 229 (355)
Q Consensus 153 ~aS~l~~~~L~~--~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl-l~~~l~r~~~~~g~~~v~~~~~Da~~ 229 (355)
+.+.+.+..+.. .++.+|||+|||+|..+..++... +|+|+|+++.++ . . .++.++.+|+..
T Consensus 8 ~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~----~--------~~~~~~~~d~~~ 72 (170)
T 3q87_B 8 EDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES----H--------RGGNLVRADLLC 72 (170)
T ss_dssp HHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT----C--------SSSCEEECSTTT
T ss_pred ccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc----c--------cCCeEEECChhh
Confidence 334444444655 678899999999999999988765 999999999988 5 1 123455555532
Q ss_pred ------eecccCCCCCccCCccccchHHHHhhhh--HHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 230 ------VYSTCSLSPIQNDGVVHMSLKRIWEETG--CEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 230 ------lDaPCSgsG~t~~~~l~~~~~~l~~l~~--lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
.|.-.+... +.|..+....... ..+++..+++.+ |||+++.++.+. .+...+..++++
T Consensus 73 ~~~~~~fD~i~~n~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~---~~~~~l~~~l~~ 138 (170)
T 3q87_B 73 SINQESVDVVVFNPP------YVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA---NRPKEVLARLEE 138 (170)
T ss_dssp TBCGGGCSEEEECCC------CBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG---GCHHHHHHHHHH
T ss_pred hcccCCCCEEEECCC------CccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC---CCHHHHHHHHHH
Confidence 222221111 1111110000000 015677777777 999999988766 556667777764
No 184
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.42 E-value=1.4e-07 Score=94.35 Aligned_cols=141 Identities=16% Similarity=0.100 Sum_probs=90.1
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhc-------------CCCcEEEEcCCchhh--HHhhccccc
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTL-------------YPDYYCMDGASLLPV--LALNIRPYD 212 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~-------------~~g~V~AvD~s~~Rl--l~~~l~r~~ 212 (355)
||--..-+.+.+.++.+.+|.+|||.|||+|+....++..+ ....++++|+++..+ ++.|+. .
T Consensus 153 fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~--l 230 (445)
T 2okc_A 153 YFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY--L 230 (445)
T ss_dssp GCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH--H
T ss_pred ccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH--H
Confidence 45444555667778889999999999999999999888753 236899999999988 566654 1
Q ss_pred cccCcc--eEEEEEecc-----------eeeecccCCCCCccCCc-cccchHHHHhhhhHH-HHHHHHHhhccCCcEEEE
Q psy7769 213 TVLDIH--ALKLVKVGG-----------SVVYSTCSLSPIQNDGV-VHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVY 277 (355)
Q Consensus 213 ~~~g~~--~v~~~~~Da-----------~~lDaPCSgsG~t~~~~-l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVY 277 (355)
.|.. ++.+.++|. ...+||.++... .... .+.... ......+ ..+.+++++|||||++++
T Consensus 231 --~g~~~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~-~~~~~~~~~~~--~~~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 231 --HGIGTDRSPIVCEDSLEKEPSTLVDVILANPPFGTRPA-GSVDINRPDFY--VETKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp --TTCCSSCCSEEECCTTTSCCSSCEEEEEECCCSSCCCT-TCCCCCCTTSS--SCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred --hCCCcCCCCEeeCCCCCCcccCCcCEEEECCCCCCccc-ccchhhHhhcC--CCCcchHHHHHHHHHHHhccCCEEEE
Confidence 2332 344555443 347778765441 1111 110000 0012234 779999999999999999
Q ss_pred EeCC--CCCCCCHHHHHHHH
Q psy7769 278 STCS--LSPIQNDGVVHMSL 295 (355)
Q Consensus 278 sTCS--l~~~ENE~vV~~~L 295 (355)
.++. ++....+..+.+.|
T Consensus 306 V~p~~~L~~~~~~~~iR~~L 325 (445)
T 2okc_A 306 VLPDNVLFEAGAGETIRKRL 325 (445)
T ss_dssp EEEHHHHHCSTHHHHHHHHH
T ss_pred EECCcccccCcHHHHHHHHH
Confidence 8865 33333344555544
No 185
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.42 E-value=4.5e-07 Score=81.30 Aligned_cols=99 Identities=11% Similarity=-0.018 Sum_probs=68.2
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceee------ecccCC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVV------YSTCSL 236 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~l------DaPCSg 236 (355)
.++.+|||+|||+|..+..++... ..|+++|+++.++ +++++. ++.+...|...+ |.-.+.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~~~---------~~~~~~~d~~~~~~~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF--GDTAGLELSEDMLTHARKRLP---------DATLHQGDMRDFRLGRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH--SEEEEEESCHHHHHHHHHHCT---------TCEEEECCTTTCCCSSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhCC---------CCEEEECCHHHcccCCCCcEEEEc
Confidence 578899999999999999999876 4899999999999 555543 246666676432 222211
Q ss_pred CCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 237 SPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 237 sG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
.+ .+.+-+ .......+|+++.++|||||.++.+++...
T Consensus 108 ~~-----~~~~~~----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 108 FS-----SVGYLK----TTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp TT-----GGGGCC----SHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred Cc-----hHhhcC----CHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 11 011110 001223789999999999999999887653
No 186
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.41 E-value=1.7e-07 Score=85.85 Aligned_cols=46 Identities=17% Similarity=0.003 Sum_probs=38.9
Q ss_pred CCCCCeEeeecccCcchHHHHHHh--cCCCcEEEEcCCchhh--HHhhcc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQT--LYPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~--~~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
..++.+|||+|||+|..+..++.. ....+|+|+|+|+.++ +++++.
T Consensus 49 ~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 49 GDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp CCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHH
T ss_pred cCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHH
Confidence 346789999999999999999887 3346899999999999 777766
No 187
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.40 E-value=4.4e-07 Score=86.80 Aligned_cols=64 Identities=14% Similarity=0.103 Sum_probs=52.3
Q ss_pred HHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEec
Q psy7769 158 PVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVG 226 (355)
Q Consensus 158 ~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~D 226 (355)
++..|++++|.+|||+|||+|+.|..++..++.++|+|+|.|+.++ ++++++ . .+ .++.++++|
T Consensus 18 ~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~--~--~g-~~v~~v~~d 83 (301)
T 1m6y_A 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLK--E--FS-DRVSLFKVS 83 (301)
T ss_dssp HHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTG--G--GT-TTEEEEECC
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH--h--cC-CcEEEEECC
Confidence 4566788999999999999999999999987568999999999999 788887 3 23 456665544
No 188
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.38 E-value=6.4e-07 Score=84.27 Aligned_cols=114 Identities=18% Similarity=-0.044 Sum_probs=76.0
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcccccccc-------CcceEEEEEeccee------
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVL-------DIHALKLVKVGGSV------ 229 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~-------g~~~v~~~~~Da~~------ 229 (355)
..+.+|||+|||+|+.+..++.. +.++|+++|+++..+ +++++ ++.... ..++++++..|+..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~ 151 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNR 151 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccC
Confidence 45679999999999999999887 557999999999999 77776 221001 23568888777632
Q ss_pred ------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHH
Q psy7769 230 ------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLK 296 (355)
Q Consensus 230 ------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~ 296 (355)
+|+|+. .| + ...+ -..++++.+.+.|+|||.++..+++.. .+...+..+.+
T Consensus 152 ~fD~Ii~d~~~~-~~----------~--~~~l-~~~~~l~~~~~~L~pgG~lv~~~~~~~--~~~~~~~~~~~ 208 (281)
T 1mjf_A 152 GFDVIIADSTDP-VG----------P--AKVL-FSEEFYRYVYDALNNPGIYVTQAGSVY--LFTDELISAYK 208 (281)
T ss_dssp CEEEEEEECCCC-C-----------------T-TSHHHHHHHHHHEEEEEEEEEEEEETT--TSHHHHHHHHH
T ss_pred CeeEEEECCCCC-CC----------c--chhh-hHHHHHHHHHHhcCCCcEEEEEcCCcc--cCHHHHHHHHH
Confidence 444431 11 1 0000 012789999999999999999887753 24444444444
No 189
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.38 E-value=2.6e-07 Score=90.51 Aligned_cols=117 Identities=14% Similarity=0.049 Sum_probs=76.4
Q ss_pred hCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCCC
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLSP 238 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgsG 238 (355)
+...+|.+|||+|||+|..+..+++.. ..+|+|+|++ .++ ++++++ . .+. .+++++.+|...++.|-
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~---- 128 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVK--A--NNLDHIVEVIEGSVEDISLPE---- 128 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHH--H--TTCTTTEEEEESCGGGCCCSS----
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHH--H--cCCCCeEEEEECchhhcCcCC----
Confidence 456789999999999999999998874 3599999999 888 777776 3 233 34889998886543331
Q ss_pred CccCCc-cccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC--CCCCCHH
Q psy7769 239 IQNDGV-VHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL--SPIQNDG 289 (355)
Q Consensus 239 ~t~~~~-l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl--~~~ENE~ 289 (355)
..+-- ..|-..-+.....+..++..+.++|||||.++.+.+++ .+.+.+.
T Consensus 129 -~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~ 181 (376)
T 3r0q_C 129 -KVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNI 181 (376)
T ss_dssp -CEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTH
T ss_pred -cceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchH
Confidence 00000 00100000000122378889999999999999877664 3444443
No 190
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.36 E-value=1.6e-06 Score=84.89 Aligned_cols=136 Identities=11% Similarity=-0.045 Sum_probs=85.1
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh-HHhhccccccccCcceEEEEE-
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV-LALNIRPYDTVLDIHALKLVK- 224 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl-l~~~l~r~~~~~g~~~v~~~~- 224 (355)
||--..-..+.+..+.+.++.+|||+|||+|+.+..+++.. ....|+|+|+++.++ +..+ +.+.+
T Consensus 21 ~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a~~------------~~~~~~ 88 (421)
T 2ih2_A 21 VETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPW------------AEGILA 88 (421)
T ss_dssp CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCTT------------EEEEES
T ss_pred EeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhCCC------------CcEEeC
Confidence 55445555566666666667899999999999999999875 447999999999887 3222 23333
Q ss_pred ----------ecceeeecccCCCCCccCCcc--ccchHHHH----------hhhhHH-HHHHHHHhhccCCcEEEEEeCC
Q psy7769 225 ----------VGGSVVYSTCSLSPIQNDGVV--HMSLKRIW----------EETGCE-IEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 225 ----------~Da~~lDaPCSgsG~t~~~~l--~~~~~~l~----------~l~~lQ-~lL~~A~~~LkpGG~lVYsTCS 281 (355)
.|....+||....+.. .++ +...+... ...+++ .++.++.++|+|||++++.++.
T Consensus 89 D~~~~~~~~~fD~Ii~NPPy~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 89 DFLLWEPGEAFDLILGNPPYGIVGEA--SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CGGGCCCSSCEEEEEECCCCCCBSCT--TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred ChhhcCccCCCCEEEECcCccCcccc--cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 3444477887544310 000 01111100 112345 7899999999999999999876
Q ss_pred C-CCCCCHHHHHHHHHh
Q psy7769 282 L-SPIQNDGVVHMSLKR 297 (355)
Q Consensus 282 l-~~~ENE~vV~~~L~~ 297 (355)
- ...+....+...|.+
T Consensus 167 ~~l~~~~~~~lr~~l~~ 183 (421)
T 2ih2_A 167 TWLVLEDFALLREFLAR 183 (421)
T ss_dssp GGGTCGGGHHHHHHHHH
T ss_pred HHhcCccHHHHHHHHHh
Confidence 2 222233445555543
No 191
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.36 E-value=3.2e-07 Score=88.90 Aligned_cols=114 Identities=14% Similarity=0.047 Sum_probs=77.2
Q ss_pred HHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecc--
Q psy7769 159 VLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYST-- 233 (355)
Q Consensus 159 ~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaP-- 233 (355)
...+...+|.+|||+|||+|..+..+++. +.++|+|+|.++ ++ ++++++ . .+. .++.++..|...++.|
T Consensus 43 ~~~l~~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~--~--~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 43 LQNHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVK--S--NNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHTGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHH--H--TTCTTTEEEEESCTTTCCCSSC
T ss_pred HhccccCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHH--H--cCCCCcEEEEEcchhhCCCCCc
Confidence 34455678999999999999999988876 336999999996 66 777776 3 244 5688988887653322
Q ss_pred ----cCC-CCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC--CCCCHHH
Q psy7769 234 ----CSL-SPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS--PIQNDGV 290 (355)
Q Consensus 234 ----CSg-sG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~--~~ENE~v 290 (355)
.|. .+ .++..+ ...+.+.++.++|||||.++.+++++. +.+.+..
T Consensus 117 ~D~Ivs~~~~------~~~~~~------~~~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~ 168 (348)
T 2y1w_A 117 VDIIISEPMG------YMLFNE------RMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQL 168 (348)
T ss_dssp EEEEEECCCB------TTBTTT------SHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHH
T ss_pred eeEEEEeCch------hcCChH------HHHHHHHHHHhhcCCCeEEEEecCcEEEEEecchHH
Confidence 211 00 011111 112567788999999999998877764 4455543
No 192
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.35 E-value=3.7e-07 Score=83.81 Aligned_cols=91 Identities=12% Similarity=0.042 Sum_probs=58.0
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEE-e-------cceeeecccC
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVK-V-------GGSVVYSTCS 235 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~-~-------Da~~lDaPCS 235 (355)
+|.+|||+|||+|+.|..+++.. ..+|+|+|+++.++ .+++..+... .+..++.... . |...+|...+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~D~v~~ 114 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERVVV-MEQFNFRNAVLADFEQGRPSFTSIDVSFI 114 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTEEE-ECSCCGGGCCGGGCCSCCCSEEEECCSSS
T ss_pred CCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccccc-cccceEEEeCHhHcCcCCCCEEEEEEEhh
Confidence 57799999999999999998873 35999999999999 3444331100 0001111111 1 1111333221
Q ss_pred CCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEe
Q psy7769 236 LSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 236 gsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsT 279 (355)
. +..+|..+.++|||||+++..+
T Consensus 115 ~---------------------l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 115 S---------------------LDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp C---------------------GGGTHHHHHHHSCTTCEEEEEE
T ss_pred h---------------------HHHHHHHHHHhccCCCEEEEEE
Confidence 1 1267999999999999999964
No 193
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.34 E-value=5.8e-07 Score=84.26 Aligned_cols=106 Identities=11% Similarity=-0.069 Sum_probs=63.8
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEE--Eeccee-----eecc
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLV--KVGGSV-----VYST 233 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~--~~Da~~-----lDaP 233 (355)
.+++|++|||+|||||+.|..+++. ++|+|+|+++ ++ ++++..... ..+ .++.++ ++|+.. +|..
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~-~~~-~~v~~~~~~~D~~~l~~~~fD~V 144 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITE-SYG-WNIVKFKSRVDIHTLPVERTDVI 144 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCC-BTT-GGGEEEECSCCTTTSCCCCCSEE
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhh-ccC-CCeEEEecccCHhHCCCCCCcEE
Confidence 3678999999999999999988876 7999999998 43 221111000 011 156777 677653 3333
Q ss_pred cCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCc--EEEEEeCC
Q psy7769 234 CSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGG--SVVYSTCS 281 (355)
Q Consensus 234 CSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG--~lVYsTCS 281 (355)
.|..+ ... ..|..+ ....+ .+|..+.++||||| .++..+-.
T Consensus 145 ~sd~~-~~~--~~~~~d---~~~~l-~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 145 MCDVG-ESS--PKWSVE---SERTI-KILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EECCC-CCC--SCHHHH---HHHHH-HHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEeCc-ccC--Cccchh---HHHHH-HHHHHHHHHhccCCCeEEEEEeCC
Confidence 32211 000 001111 10001 37889999999999 99986644
No 194
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.34 E-value=7.1e-07 Score=83.61 Aligned_cols=102 Identities=11% Similarity=0.032 Sum_probs=64.5
Q ss_pred CCCCCeEeeecccCcchHHHHHHh----cCCCcE--EEEcCCchhh--HHhhccccccccCcceEEEE--Eeccee----
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQT----LYPDYY--CMDGASLLPV--LALNIRPYDTVLDIHALKLV--KVGGSV---- 229 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~----~~~g~V--~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~--~~Da~~---- 229 (355)
+.++.+|||+|||+|..|..++.. .....| +++|.|+.++ +++++.. . .+..++.+. ..|+..
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~-~--~~~~~v~~~~~~~~~~~~~~~ 126 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAK-T--SNLENVKFAWHKETSSEYQSR 126 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHT-C--SSCTTEEEEEECSCHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHh-c--cCCCcceEEEEecchhhhhhh
Confidence 467889999999999887755432 233544 9999999999 6666641 1 133445443 333211
Q ss_pred ---------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 230 ---------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 230 ---------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
.|...+... +......+..|+++.++|||||+++.++.+
T Consensus 127 ~~~~~~~~~fD~V~~~~~-------------l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 127 MLEKKELQKWDFIHMIQM-------------LYYVKDIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp HHTTTCCCCEEEEEEESC-------------GGGCSCHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hccccCCCceeEEEEeee-------------eeecCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence 222221111 222233347899999999999999988644
No 195
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.33 E-value=3.5e-07 Score=87.16 Aligned_cols=37 Identities=22% Similarity=0.111 Sum_probs=33.4
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
+|.+|||+|||+|+.|..+++.. .++|+|+|+++.++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL 121 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQL 121 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCS
T ss_pred cccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHH
Confidence 57899999999999999988873 46999999999999
No 196
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.33 E-value=1.9e-06 Score=80.77 Aligned_cols=106 Identities=8% Similarity=-0.088 Sum_probs=69.4
Q ss_pred CCCeEeeecccC---cchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeec----c---
Q psy7769 166 PYDTVLDMCAAP---GGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYS----T--- 233 (355)
Q Consensus 166 pG~~VLD~CAgP---GgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDa----P--- 233 (355)
+..+|||+|||+ |..+..+++....++|+++|+|+.++ +++++. . ..++.++.+|....+. |
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~--~----~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA--K----DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT--T----CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC--C----CCCeEEEEeeCCCchhhhccchhh
Confidence 447999999999 98665555555558999999999999 666665 2 2468899999754211 0
Q ss_pred ----c-CCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 234 ----C-SLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 234 ----C-SgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
. +-..+.....++|-++. ..+.+|+++.+.|||||+|+.++...
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~-----~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPD-----VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTT-----THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred ccCCCCCCEEEEEechhhhCCcH-----HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 0 00000000012222211 12378999999999999999998765
No 197
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.33 E-value=2.1e-06 Score=82.96 Aligned_cols=106 Identities=12% Similarity=0.008 Sum_probs=75.8
Q ss_pred HHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEeccee-----
Q psy7769 158 PVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSV----- 229 (355)
Q Consensus 158 ~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~----- 229 (355)
.+..++..++.+|||+|||+|..+..++......+++++|+ +..+ +++++. . .+. .++.+...|...
T Consensus 174 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~ 248 (374)
T 1qzz_A 174 PADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFA--D--AGLADRVTVAEGDFFKPLPVT 248 (374)
T ss_dssp HHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH--H--TTCTTTEEEEECCTTSCCSCC
T ss_pred HHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHH--h--cCCCCceEEEeCCCCCcCCCC
Confidence 34455677889999999999999999998876679999999 8888 777776 2 233 368899888743
Q ss_pred eecccCCCCCccCCccc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeC
Q psy7769 230 VYSTCSLSPIQNDGVVH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 lDaPCSgsG~t~~~~l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTC 280 (355)
.|.-.+. ..++ |..... .++|+++.+.|||||+++....
T Consensus 249 ~D~v~~~------~vl~~~~~~~~------~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 249 ADVVLLS------FVLLNWSDEDA------LTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEEE------SCGGGSCHHHH------HHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEEe------ccccCCCHHHH------HHHHHHHHHhcCCCcEEEEEec
Confidence 2222110 0021 332211 1789999999999999998876
No 198
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.32 E-value=5.7e-07 Score=81.04 Aligned_cols=108 Identities=14% Similarity=-0.005 Sum_probs=69.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-eecccCCCCCc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV-VYSTCSLSPIQ 240 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~-lDaPCSgsG~t 240 (355)
+.+|.+|||+|||+|..+..++... .+|+++|+++.++ ++++.. ++.++..|... +..+. .+
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~d~~~~~~~~~--~~-- 110 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQA--ARWAAYDFSPELLKLARANAP---------HADVYEWNGKGELPAGL--GA-- 110 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHCT---------TSEEEECCSCSSCCTTC--CC--
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhCC---------CceEEEcchhhccCCcC--CC--
Confidence 4688999999999999999998873 7999999999999 555522 35677777631 11110 00
Q ss_pred cCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 241 NDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 241 ~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
.-++.+.. .....+|+++.++|||||+++.... ..+...+...+.+
T Consensus 111 -~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~~~~----~~~~~~~~~~l~~ 156 (226)
T 3m33_A 111 -PFGLIVSR------RGPTSVILRLPELAAPDAHFLYVGP----RLNVPEVPERLAA 156 (226)
T ss_dssp -CEEEEEEE------SCCSGGGGGHHHHEEEEEEEEEEES----SSCCTHHHHHHHH
T ss_pred -CEEEEEeC------CCHHHHHHHHHHHcCCCcEEEEeCC----cCCHHHHHHHHHH
Confidence 00111111 0111668899999999999993222 2344456666664
No 199
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.32 E-value=7.6e-07 Score=83.98 Aligned_cols=105 Identities=10% Similarity=-0.017 Sum_probs=63.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEE--Eeccee-----eeccc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLV--KVGGSV-----VYSTC 234 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~--~~Da~~-----lDaPC 234 (355)
+++|.+|||+|||||+.|..+++. ++|+|+|+++ ++ ++++...... .+ .++.++ ++|... +|...
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~-~~-~~v~~~~~~~D~~~l~~~~fD~Vv 153 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVET-FG-WNLITFKSKVDVTKMEPFQADTVL 153 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCC-TT-GGGEEEECSCCGGGCCCCCCSEEE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhh-cC-CCeEEEeccCcHhhCCCCCcCEEE
Confidence 578999999999999999998876 7999999998 44 2222110000 11 156777 777654 33333
Q ss_pred CCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCc--EEEEEeCC
Q psy7769 235 SLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGG--SVVYSTCS 281 (355)
Q Consensus 235 SgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG--~lVYsTCS 281 (355)
|..+ .... .|..+ ....+ .+|..+.++||||| .++..+.+
T Consensus 154 sd~~-~~~~--~~~~d---~~~~l-~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 154 CDIG-ESNP--TAAVE---ASRTL-TVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp ECCC-CCCS--CHHHH---HHHHH-HHHHHHHHHHHHSTTCEEEEEESC
T ss_pred ECCC-cCCC--chhhh---HHHHH-HHHHHHHHHhccCCCcEEEEEeCC
Confidence 2211 0000 01111 10001 37889999999999 99986654
No 200
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.31 E-value=6.8e-07 Score=81.90 Aligned_cols=96 Identities=9% Similarity=-0.075 Sum_probs=66.0
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------eecccCC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------VYSTCSL 236 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------lDaPCSg 236 (355)
.++.+|||+|||+|..+..++... ..|+++|+++.++ +++++. ++.++..|... .|+..+.
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~---------~~~~~~~d~~~~~~~~~fD~v~~~ 117 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP---------DAVLHHGDMRDFSLGRRFSAVTCM 117 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTCCCSCCEEEEEEC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC---------CCEEEECChHHCCccCCcCEEEEc
Confidence 467899999999999999988764 5899999999999 555544 24667777643 3333221
Q ss_pred CCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeC
Q psy7769 237 SPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 237 sG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTC 280 (355)
.+ .+.+- .....+..+|+++.++|||||.++.++.
T Consensus 118 ~~-----~l~~~----~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 118 FS-----SIGHL----AGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp TT-----GGGGS----CHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred Cc-----hhhhc----CCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 11 01111 0111233789999999999999999754
No 201
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.30 E-value=7.8e-07 Score=80.53 Aligned_cols=92 Identities=9% Similarity=-0.107 Sum_probs=63.7
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee---------eec
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV---------VYS 232 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~---------lDa 232 (355)
++++.+|||+|||+|..+..+++.. .+|+++|+|+.++ +++++ .++..|... +|.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~------------~~~~~d~~~~~~~~~~~~fD~ 104 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEG--IESIGVDINEDMIKFCEGKF------------NVVKSDAIEYLKSLPDKYLDG 104 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHT--CCEEEECSCHHHHHHHHTTS------------EEECSCHHHHHHTSCTTCBSE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCC--CcEEEEECCHHHHHHHHhhc------------ceeeccHHHHhhhcCCCCeeE
Confidence 5688999999999999999888873 6899999999988 44442 233344322 222
Q ss_pred ccCCCCCccCCccccchHHHHhhh--hHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 233 TCSLSPIQNDGVVHMSLKRIWEET--GCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 233 PCSgsG~t~~~~l~~~~~~l~~l~--~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
-.+.. -+..+. .+..+|+++.++|||||.++.++...
T Consensus 105 i~~~~-------------~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 105 VMISH-------------FVEHLDPERLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp EEEES-------------CGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred EEECC-------------chhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 22111 111112 23378999999999999999988653
No 202
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.30 E-value=2.4e-07 Score=89.80 Aligned_cols=111 Identities=13% Similarity=0.032 Sum_probs=72.2
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCCCC
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLSPI 239 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgsG~ 239 (355)
.+.+|.+|||+|||+|..+..+++. +..+|+|+|++ .++ ++++++ . .+. .++.++.+|...+..|- +
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s-~~l~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~---~- 132 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECS-SISDYAVKIVK--A--NKLDHVVTIIKGKVEEVELPV---E- 132 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECS-THHHHHHHHHH--H--TTCTTTEEEEESCTTTCCCSS---S-
T ss_pred ccCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcH-HHHHHHHHHHH--H--cCCCCcEEEEECcHHHccCCC---C-
Confidence 3568899999999999999999887 34699999999 477 777776 3 243 34889998876533220 0
Q ss_pred ccCCcc-ccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 240 QNDGVV-HMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 240 t~~~~l-~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
..+--+ .|-..-+.....+..++..+.++|||||.++.+.+++.
T Consensus 133 ~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~ 177 (349)
T 3q7e_A 133 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATLY 177 (349)
T ss_dssp CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEEEEE
T ss_pred ceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccceEE
Confidence 000000 01000011111233788999999999999997777654
No 203
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.29 E-value=3.3e-07 Score=84.84 Aligned_cols=116 Identities=16% Similarity=0.114 Sum_probs=67.0
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccC------------------------
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLD------------------------ 216 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g------------------------ 216 (355)
.+.+|.+|||+|||+|..+..++... -..|+|+|+|+.++ ++++++.......
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 46689999999999998776655442 14799999999999 6666541000000
Q ss_pred -cceEE-EEEecceeeecccC-CCCCccCCcc-ccchHHH-HhhhhHHHHHHHHHhhccCCcEEEEEeC
Q psy7769 217 -IHALK-LVKVGGSVVYSTCS-LSPIQNDGVV-HMSLKRI-WEETGCEIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 217 -~~~v~-~~~~Da~~lDaPCS-gsG~t~~~~l-~~~~~~l-~~l~~lQ~lL~~A~~~LkpGG~lVYsTC 280 (355)
..++. ++..|....++.-. ..+ +.+--+ .+....+ .....+..+|+++.++|||||+++.++.
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~-~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLP-LADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCC-CEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHhhhheEEeccccCCCCCCccccC-CCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 01243 66777543221100 001 111100 0111111 1112333889999999999999999974
No 204
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.28 E-value=2.1e-06 Score=82.79 Aligned_cols=113 Identities=9% Similarity=0.045 Sum_probs=77.4
Q ss_pred HHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccC
Q psy7769 159 VLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCS 235 (355)
Q Consensus 159 ~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCS 235 (355)
+..++..++.+|||+|||+|..+..++...+..+++++|+ +..+ +++++. . .+. .++++..+|......|-
T Consensus 183 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~- 256 (359)
T 1x19_A 183 LEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAA--E--KGVADRMRGIAVDIYKESYPE- 256 (359)
T ss_dssp HHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHH--H--TTCTTTEEEEECCTTTSCCCC-
T ss_pred HHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHH--h--cCCCCCEEEEeCccccCCCCC-
Confidence 3445677889999999999999999999876679999999 8888 777776 3 233 34899999875432111
Q ss_pred CCCCccCCccc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 236 LSPIQNDGVVH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 236 gsG~t~~~~l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
+.-+.....++ |..+. ..++|+++.+.|||||+++.......
T Consensus 257 ~D~v~~~~vlh~~~d~~------~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 257 ADAVLFCRILYSANEQL------STIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp CSEEEEESCGGGSCHHH------HHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred CCEEEEechhccCCHHH------HHHHHHHHHHhcCCCCEEEEEecccC
Confidence 00000000011 33221 22789999999999999988776553
No 205
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.28 E-value=3.7e-07 Score=87.68 Aligned_cols=116 Identities=11% Similarity=0.004 Sum_probs=74.3
Q ss_pred hCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCCC
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLSP 238 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgsG 238 (355)
+...++.+|||+|||+|..+..+++.. ..+|+|+|++ .++ ++++++ . .+. .++.++.+|+..++.|-.
T Consensus 34 ~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~--~--~~~~~~i~~~~~d~~~~~~~~~--- 104 (328)
T 1g6q_1 34 KDLFKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVE--L--NGFSDKITLLRGKLEDVHLPFP--- 104 (328)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHH--H--TTCTTTEEEEESCTTTSCCSSS---
T ss_pred HhhcCCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHH--H--cCCCCCEEEEECchhhccCCCC---
Confidence 445678999999999999998888763 3589999999 567 777776 2 233 458888888754332210
Q ss_pred CccCCccc---cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC--CCCCHH
Q psy7769 239 IQNDGVVH---MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS--PIQNDG 289 (355)
Q Consensus 239 ~t~~~~l~---~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~--~~ENE~ 289 (355)
.-++. |-...+.....+..+|..+.++|||||.++.+++++. +.+...
T Consensus 105 ---~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~ 157 (328)
T 1g6q_1 105 ---KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPDKCSIHLAGLEDSQ 157 (328)
T ss_dssp ---CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHH
T ss_pred ---cccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEeeceEEEEEecCch
Confidence 00000 0000011111233778889999999999997766643 335443
No 206
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.28 E-value=1.9e-06 Score=76.09 Aligned_cols=97 Identities=14% Similarity=-0.023 Sum_probs=65.1
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee--------
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV-------- 229 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~-------- 229 (355)
..+...++.+|||+|||+|..+..++... .+|+++|+++.++ ++++ . . +.+...|...
T Consensus 46 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-~--~-------~~~~~~~~~~~~~~~~~~ 113 (227)
T 3e8s_A 46 LAILGRQPERVLDLGCGEGWLLRALADRG--IEAVGVDGDRTLVDAARAA-G--A-------GEVHLASYAQLAEAKVPV 113 (227)
T ss_dssp HHHHHTCCSEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHT-C--S-------SCEEECCHHHHHTTCSCC
T ss_pred HHhhcCCCCEEEEeCCCCCHHHHHHHHCC--CEEEEEcCCHHHHHHHHHh-c--c-------cccchhhHHhhccccccc
Confidence 33445677999999999999999988773 6899999999998 5444 2 1 1233333322
Q ss_pred ---eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 230 ---VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 230 ---lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+|.-.+... +. ....+.+|+++.++|||||+++.++...
T Consensus 114 ~~~fD~v~~~~~-------------l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 114 GKDYDLICANFA-------------LL-HQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp CCCEEEEEEESC-------------CC-SSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCccEEEECch-------------hh-hhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 222221111 01 1223378999999999999999988644
No 207
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.26 E-value=2.4e-06 Score=82.11 Aligned_cols=121 Identities=12% Similarity=-0.031 Sum_probs=77.6
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee--------eeccc
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV--------VYSTC 234 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~--------lDaPC 234 (355)
..+.+|||+|||+|+.+..++...+..+|+++|+++..+ +++++..+....+.++++++..|+.. .|.-.
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 356799999999999999988764457999999999999 77887621000123568888888643 22222
Q ss_pred CCCCCccCCccccchHHHHhhhhH-HHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 235 SLSPIQNDGVVHMSLKRIWEETGC-EIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 235 SgsG~t~~~~l~~~~~~l~~l~~l-Q~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
+... + .+.+. . ... .++++.+.+.|+|||.++..+.+.. -+...+..+++.
T Consensus 195 ~d~~---~---p~~~~--~--~l~~~~~l~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~~~~~ 246 (321)
T 2pt6_A 195 VDSS---D---PIGPA--E--TLFNQNFYEKIYNALKPNGYCVAQCESLW--IHVGTIKNMIGY 246 (321)
T ss_dssp EECC---C---SSSGG--G--GGSSHHHHHHHHHHEEEEEEEEEEECCTT--TCHHHHHHHHHH
T ss_pred ECCc---C---CCCcc--h--hhhHHHHHHHHHHhcCCCcEEEEEcCCcc--cCHHHHHHHHHH
Confidence 1100 0 01111 0 011 2789999999999999999865532 234445555444
No 208
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.26 E-value=1.2e-06 Score=77.67 Aligned_cols=100 Identities=10% Similarity=-0.074 Sum_probs=64.2
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQND 242 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~ 242 (355)
.++.+|||+|||+|..+..++.. + .+|+++|+++.++ ++++.. .+...|....+.|... + .
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~-----------~~~~~d~~~~~~~~~~-~---~ 93 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD-----------HVVLGDIETMDMPYEE-E---Q 93 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS-----------EEEESCTTTCCCCSCT-T---C
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC-----------cEEEcchhhcCCCCCC-C---c
Confidence 68899999999999999999887 3 8999999999988 544433 2444454321111100 0 0
Q ss_pred CccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 243 GVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 243 ~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
-++.+...-+........+|+++.++|+|||.++.++-.
T Consensus 94 fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 94 FDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred cCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 001111111122222337899999999999999998744
No 209
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.26 E-value=7.9e-07 Score=82.95 Aligned_cols=44 Identities=11% Similarity=-0.034 Sum_probs=33.2
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcc
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
.+|.+|||+|||+|. +..++.......|+++|+|+.++ ++++++
T Consensus 70 ~~~~~vLDiGcG~G~-~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 70 VSGRTLIDIGSGPTV-YQLLSACSHFEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp SCCSEEEEETCTTCC-GGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcCh-HHHHhhccCCCeEEEeCCCHHHHHHHHHHHh
Confidence 378899999999999 44333332346899999999999 666554
No 210
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.26 E-value=5.8e-06 Score=80.17 Aligned_cols=109 Identities=6% Similarity=-0.141 Sum_probs=77.2
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeee--cccCCCCC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVY--STCSLSPI 239 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lD--aPCSgsG~ 239 (355)
..+.+|||+|||+|..+..+++..+..+++++|+ +..+ +++++. . .+. .++++..+|....+ .|- +.-+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~p~-~~D~ 251 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTA--G--LSGSERIHGHGANLLDRDVPFPT-GFDA 251 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHT--T--CTTGGGEEEEECCCCSSSCCCCC-CCSE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHH--h--cCcccceEEEEccccccCCCCCC-CcCE
Confidence 4567999999999999999999876689999999 8888 777776 3 233 57899999986433 231 1111
Q ss_pred ccCCc-cc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCC
Q psy7769 240 QNDGV-VH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPI 285 (355)
Q Consensus 240 t~~~~-l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ 285 (355)
..-.. ++ |..... .++|+++.+.|||||+|+.....+...
T Consensus 252 v~~~~vlh~~~~~~~------~~~l~~~~~~L~pgG~l~i~e~~~~~~ 293 (363)
T 3dp7_A 252 VWMSQFLDCFSEEEV------ISILTRVAQSIGKDSKVYIMETLWDRQ 293 (363)
T ss_dssp EEEESCSTTSCHHHH------HHHHHHHHHHCCTTCEEEEEECCTTSC
T ss_pred EEEechhhhCCHHHH------HHHHHHHHHhcCCCcEEEEEeeccCCc
Confidence 11111 22 443322 278999999999999999987766543
No 211
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.26 E-value=1.6e-06 Score=81.94 Aligned_cols=113 Identities=15% Similarity=0.081 Sum_probs=70.8
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcccccc---ccCcceEEEEEecceeeec--ccC-C
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDT---VLDIHALKLVKVGGSVVYS--TCS-L 236 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~---~~g~~~v~~~~~Da~~lDa--PCS-g 236 (355)
.++.+|||+|||+|..+..++.. ....|+++|+++.++ ++++...... ..+..++.++..|...++. +.. .
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 47889999999999999998874 347899999999999 6666541000 0022468888888754320 010 0
Q ss_pred CCCccCCc-----cccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 237 SPIQNDGV-----VHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 237 sG~t~~~~-----l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
.+ +.+-- ++|.. ........+|.++.++|||||.++.+|...
T Consensus 112 ~~-~fD~V~~~~~l~~~~---~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 112 QM-CFDICSCQFVCHYSF---ESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TC-CEEEEEEETCGGGGG---GSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CC-CEEEEEEecchhhcc---CCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 00 00000 22321 111222388999999999999999988754
No 212
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.26 E-value=8.5e-07 Score=81.55 Aligned_cols=96 Identities=15% Similarity=0.027 Sum_probs=64.5
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQND 242 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~ 242 (355)
.++.+|||+|||+|..+..++.....+.|+++|+++.++ ++++.. ++.+...|+..+..+- + +
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~d~~~~~~~~---~-~-- 148 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP---------QVTFCVASSHRLPFSD---T-S-- 148 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTSCSBCT---T-C--
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC---------CcEEEEcchhhCCCCC---C-c--
Confidence 678999999999999999999876557999999999999 554443 2355666654321110 0 0
Q ss_pred CccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 243 GVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 243 ~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
-++.+.... ...++++.++|||||+++.++...
T Consensus 149 fD~v~~~~~-------~~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 149 MDAIIRIYA-------PCKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp EEEEEEESC-------CCCHHHHHHHEEEEEEEEEEEECT
T ss_pred eeEEEEeCC-------hhhHHHHHHhcCCCcEEEEEEcCH
Confidence 000000000 034788999999999999987654
No 213
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.25 E-value=3.9e-06 Score=79.04 Aligned_cols=120 Identities=10% Similarity=-0.042 Sum_probs=76.9
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee--------eeccc
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV--------VYSTC 234 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~--------lDaPC 234 (355)
.++.+|||+|||.|+.+..++......+|+++|+++..+ +++++.........+++.++..|+.. .|+-.
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 456799999999999999988765457999999999999 77777621000113578888888643 22222
Q ss_pred CCCCCccCCccccchHHHHhhhhH--HHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 235 SLSPIQNDGVVHMSLKRIWEETGC--EIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 235 SgsG~t~~~~l~~~~~~l~~l~~l--Q~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
+..- ..+.+. ..+ ++.++.+.+.|+|||.++..+++... +...+..+++.
T Consensus 157 ~d~~------~~~~~~-----~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~--~~~~~~~~~~~ 208 (283)
T 2i7c_A 157 VDSS------DPIGPA-----ETLFNQNFYEKIYNALKPNGYCVAQCESLWI--HVGTIKNMIGY 208 (283)
T ss_dssp EECC------CTTTGG-----GGGSSHHHHHHHHHHEEEEEEEEEECCCTTT--CHHHHHHHHHH
T ss_pred EcCC------CCCCcc-----hhhhHHHHHHHHHHhcCCCcEEEEECCCccc--CHHHHHHHHHH
Confidence 1000 001111 111 27899999999999999998776432 33344444443
No 214
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.24 E-value=9.1e-07 Score=84.16 Aligned_cols=106 Identities=13% Similarity=-0.051 Sum_probs=68.9
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccc-cccCcceEEEEEeccee--------eeccc
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYD-TVLDIHALKLVKVGGSV--------VYSTC 234 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~-~~~g~~~v~~~~~Da~~--------lDaPC 234 (355)
+..+|||+|||+|+.+..++...+..+|+++|+++..+ +++++.... ...+.++++++.+|+.. .|+-.
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 45699999999999999998765457899999999999 777765210 00123467788777653 22221
Q ss_pred CCCCCccCCccccchHHHHhhhhH--HHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 235 SLSPIQNDGVVHMSLKRIWEETGC--EIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 235 SgsG~t~~~~l~~~~~~l~~l~~l--Q~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+.. ..+... ...+ .+.++.+.+.|+|||+++..++|.
T Consensus 163 ~D~---------~~p~~~--~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~ 201 (294)
T 3adn_A 163 SDC---------TDPIGP--GESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp ECC---------------------CCHHHHHHHHHTEEEEEEEEEEEEEC
T ss_pred ECC---------CCccCc--chhccHHHHHHHHHHhcCCCCEEEEecCCc
Confidence 100 001000 0111 278999999999999999987654
No 215
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.24 E-value=5.6e-07 Score=81.91 Aligned_cols=111 Identities=12% Similarity=0.082 Sum_probs=70.7
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccC------------------------
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLD------------------------ 216 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g------------------------ 216 (355)
...+|.+|||+|||+|..+..++.... ..|+++|+++.++ +++++. .. .+
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLK--KE-PGAFDWSPVVTYVCDLEGNRMKGPEK 128 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHT--TC-TTCCCCHHHHHHHHHHTTTCSCHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHh--cC-CccccchhhhhhhhcccccccchHHH
Confidence 346788999999999999888876542 5899999999999 766665 21 00
Q ss_pred ----cceE-EEEEecceeeec-ccCCCCCccCCccccchHHHH----hhhhHHHHHHHHHhhccCCcEEEEEeC
Q psy7769 217 ----IHAL-KLVKVGGSVVYS-TCSLSPIQNDGVVHMSLKRIW----EETGCEIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 217 ----~~~v-~~~~~Da~~lDa-PCSgsG~t~~~~l~~~~~~l~----~l~~lQ~lL~~A~~~LkpGG~lVYsTC 280 (355)
..++ .+...|....++ +-...+ .-++.+...-+. .......+|+++.++|||||+++.++.
T Consensus 129 ~~~l~~~v~~~~~~d~~~~~~~~~~~~~---~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 129 EEKLRRAIKQVLKCDVTQSQPLGGVSLP---PADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCC---CEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHhhhhheeEEEeeeccCCCCCccccC---CccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 0126 778888755332 110001 111111111112 122233889999999999999999874
No 216
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.24 E-value=1.7e-06 Score=82.54 Aligned_cols=102 Identities=11% Similarity=-0.074 Sum_probs=69.8
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
..+.+|||+|||.|+.+..++......+|+++|+++..+ +++++.........++++++..|+..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 456799999999999999998765457999999999999 77776521000123568888888743
Q ss_pred eecccCCCCCccCCccccchHHHHhhhhH-H-HHHHHHHhhccCCcEEEEEeCCC
Q psy7769 230 VYSTCSLSPIQNDGVVHMSLKRIWEETGC-E-IEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 230 lDaPCSgsG~t~~~~l~~~~~~l~~l~~l-Q-~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+|++.. +.+ ...+ . ++++.+.++|+|||.++..+.+.
T Consensus 174 ~d~~~~-----------~~~-----~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 212 (304)
T 2o07_A 174 TDSSDP-----------MGP-----AESLFKESYYQLMKTALKEDGVLCCQGECQ 212 (304)
T ss_dssp EECC---------------------------CHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ECCCCC-----------CCc-----chhhhHHHHHHHHHhccCCCeEEEEecCCc
Confidence 222210 001 0112 2 78999999999999999987553
No 217
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.23 E-value=1.2e-06 Score=83.52 Aligned_cols=108 Identities=14% Similarity=0.002 Sum_probs=64.2
Q ss_pred hCCCCCCeEeeecc------cCcchHHHHHHhcC-CCcEEEEcCCchhhHHhhccccccccCcceEEE-EEecc------
Q psy7769 162 LNIRPYDTVLDMCA------APGGKTLVALQTLY-PDYYCMDGASLLPVLALNIRPYDTVLDIHALKL-VKVGG------ 227 (355)
Q Consensus 162 L~~~pG~~VLD~CA------gPGgKT~~la~~~~-~g~V~AvD~s~~Rll~~~l~r~~~~~g~~~v~~-~~~Da------ 227 (355)
+.+++|++|||+|| |||+ ..+++..+ .++|+|+|+++. + . ++++ +++|.
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-----~---------~v~~~i~gD~~~~~~~ 121 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-----S---------DADSTLIGDCATVHTA 121 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-----C---------SSSEEEESCGGGCCCS
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-----C---------CCEEEEECccccCCcc
Confidence 46789999999999 7788 55566665 489999999986 2 1 1223 33333
Q ss_pred -----eeeecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 228 -----SVVYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 228 -----~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
...|.++..+|. |..+.... ..+. ++|+.+.++|||||+++..+-.. ... ..+...+++
T Consensus 122 ~~fD~Vvsn~~~~~~g~-------~~~d~~~~-~~l~~~~l~~a~r~LkpGG~~v~~~~~~--~~~-~~l~~~l~~ 186 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKH-------VTKENDSK-EGFFTYLCGFIKQKLALGGSIAVKITEH--SWN-ADLYKLMGH 186 (290)
T ss_dssp SCEEEEEECCCCCC----------CCSCCCCC-CTHHHHHHHHHHHHEEEEEEEEEEECSS--SCC-HHHHHHHTT
T ss_pred CcccEEEEcCCcccccc-------ccccccch-HHHHHHHHHHHHHhcCCCcEEEEEEecc--CCH-HHHHHHHHH
Confidence 223333322221 11110000 1122 78999999999999999875433 233 345555654
No 218
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.23 E-value=9.2e-07 Score=78.11 Aligned_cols=97 Identities=14% Similarity=0.031 Sum_probs=61.9
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCC-cEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccC
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPD-YYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQND 242 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g-~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~ 242 (355)
++.+|||+|||+|..+..+ .. +|+++|+++.++ +++++. ++.+...|...+..+- + .
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~d~~~~~~~~---~---~ 95 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAP---------EATWVRAWGEALPFPG---E---S 95 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCT---------TSEEECCCTTSCCSCS---S---C
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCC---------CcEEEEcccccCCCCC---C---c
Confidence 8899999999999988766 34 899999999998 555543 2345555553321110 0 0
Q ss_pred CccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 243 GVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 243 ~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
-++.+...-+.......++|+++.++|||||.++.++..-
T Consensus 96 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 96 FDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp EEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 0000000111112233378999999999999999987643
No 219
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.22 E-value=3e-06 Score=81.51 Aligned_cols=106 Identities=11% Similarity=-0.001 Sum_probs=75.5
Q ss_pred HHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEeccee-----e
Q psy7769 159 VLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSV-----V 230 (355)
Q Consensus 159 ~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~-----l 230 (355)
+..++..++.+|||+|||+|..+..++......+++++|+ +..+ +++++. . .+. .++.+...|... .
T Consensus 176 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~~ 250 (360)
T 1tw3_A 176 AAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLK--D--EGLSDRVDVVEGDFFEPLPRKA 250 (360)
T ss_dssp HHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHH--H--TTCTTTEEEEECCTTSCCSSCE
T ss_pred HHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHH--h--cCCCCceEEEeCCCCCCCCCCc
Confidence 3445667889999999999999999998876678999999 8888 777776 3 233 368899988753 2
Q ss_pred ecccCCCCCccCCccc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 231 YSTCSLSPIQNDGVVH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 231 DaPCSgsG~t~~~~l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
|.-.+. ..++ |..... .++|+++.+.|||||+++.+...
T Consensus 251 D~v~~~------~vl~~~~~~~~------~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILS------FVLLNWPDHDA------VRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEE------SCGGGSCHHHH------HHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEc------ccccCCCHHHH------HHHHHHHHHhcCCCcEEEEEEEe
Confidence 221100 0011 322211 17899999999999999988766
No 220
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.22 E-value=6.4e-06 Score=77.27 Aligned_cols=116 Identities=14% Similarity=-0.040 Sum_probs=75.9
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------e
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV-------------V 230 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~-------------l 230 (355)
.+.+|||+|||.|+.+..++...+..+|+++|+++..+ +++++..+......++++++.+|+.. +
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 45799999999999999888764447999999999999 77777411000223578888888753 3
Q ss_pred ecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 231 YSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 231 DaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
|++.. .+ .+..+ -.+++++.+.+.|+|||.++..+.+. ..+...+..+++.
T Consensus 155 d~~~~-~~---------~~~~l----~~~~~~~~~~~~L~pgG~lv~~~~~~--~~~~~~~~~~~~~ 205 (275)
T 1iy9_A 155 DSTEP-VG---------PAVNL----FTKGFYAGIAKALKEDGIFVAQTDNP--WFTPELITNVQRD 205 (275)
T ss_dssp SCSSC-CS---------CCCCC----STTHHHHHHHHHEEEEEEEEEECCCT--TTCHHHHHHHHHH
T ss_pred CCCCC-CC---------cchhh----hHHHHHHHHHHhcCCCcEEEEEcCCc--cccHHHHHHHHHH
Confidence 33320 01 00000 00177899999999999999987653 2344455544443
No 221
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.22 E-value=3e-06 Score=80.39 Aligned_cols=113 Identities=14% Similarity=-0.012 Sum_probs=76.9
Q ss_pred HhhCC--CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeeccc
Q psy7769 160 LALNI--RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTC 234 (355)
Q Consensus 160 ~~L~~--~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPC 234 (355)
..++. .++.+|||+|||+|..+..+++..+..+++++|++ ..+ +++++. . .+. .++.+...|....+.|-
T Consensus 157 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~ 231 (335)
T 2r3s_A 157 QLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENAR--I--QGVASRYHTIAGSAFEVDYGN 231 (335)
T ss_dssp HHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHH--H--HTCGGGEEEEESCTTTSCCCS
T ss_pred HhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHH--h--cCCCcceEEEecccccCCCCC
Confidence 34455 78899999999999999999988766799999999 888 777766 2 233 35889988875422221
Q ss_pred CCCCCccCCc-cc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 235 SLSPIQNDGV-VH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 235 SgsG~t~~~~-l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
+.-+..-.+ ++ |.... ..++|+++.+.|+|||+++........
T Consensus 232 -~~D~v~~~~~l~~~~~~~------~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 232 -DYDLVLLPNFLHHFDVAT------CEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp -CEEEEEEESCGGGSCHHH------HHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred -CCcEEEEcchhccCCHHH------HHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 000000001 11 32221 227899999999999999988776644
No 222
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.21 E-value=2.7e-06 Score=91.13 Aligned_cols=118 Identities=12% Similarity=-0.071 Sum_probs=77.9
Q ss_pred HHHhhCCCCCCeEeeecccCcchHHHHHHhcC-CCcEEEEcCCchhh--HHhhcccccc--ccCcceEEEEEecceeeec
Q psy7769 158 PVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-PDYYCMDGASLLPV--LALNIRPYDT--VLDIHALKLVKVGGSVVYS 232 (355)
Q Consensus 158 ~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-~g~V~AvD~s~~Rl--l~~~l~r~~~--~~g~~~v~~~~~Da~~lDa 232 (355)
+...+...+|.+|||+|||+|..+..+++... ..+|+++|+++.++ +++++..... ..+..++.+..+|+..++.
T Consensus 713 LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~ 792 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS 792 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT
T ss_pred HHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc
Confidence 34555566899999999999999999988763 36999999999999 6664431000 0245689999999866443
Q ss_pred ccCCCCCccCCccccchHHHHhhhhHH--HHHHHHHhhccCCcEEEEEeCCC
Q psy7769 233 TCSLSPIQNDGVVHMSLKRIWEETGCE--IEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 233 PCSgsG~t~~~~l~~~~~~l~~l~~lQ--~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+- + . -++.+...-+..+..-+ .+++.+.++|||| .++.+|+..
T Consensus 793 ~d---~-s--FDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 793 RL---H-D--VDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp TS---C-S--CCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred cc---C-C--eeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 31 1 1 11111111122222222 6899999999998 888888753
No 223
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.21 E-value=5.7e-06 Score=78.67 Aligned_cols=109 Identities=17% Similarity=0.019 Sum_probs=75.6
Q ss_pred hCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCCC
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLSP 238 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgsG 238 (355)
++..+ .+|||+|||+|..+..+++..+..+++++|+ +..+ +++++. . .+. .++.+..+|... +.| .+.-
T Consensus 164 ~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~-~~~-~~~D 235 (334)
T 2ip2_A 164 LDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLS--S--LLAGERVSLVGGDMLQ-EVP-SNGD 235 (334)
T ss_dssp SCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTH--H--HHHTTSEEEEESCTTT-CCC-SSCS
T ss_pred CCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHh--h--cCCCCcEEEecCCCCC-CCC-CCCC
Confidence 34555 8999999999999999998876679999999 8888 777765 2 232 468899988754 223 1111
Q ss_pred CccCCc-cc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 239 IQNDGV-VH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 239 ~t~~~~-l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
+..-.+ ++ |..... .++|+++.+.|||||+++.....+..
T Consensus 236 ~v~~~~vl~~~~~~~~------~~~l~~~~~~L~pgG~l~i~e~~~~~ 277 (334)
T 2ip2_A 236 IYLLSRIIGDLDEAAS------LRLLGNCREAMAGDGRVVVIERTISA 277 (334)
T ss_dssp EEEEESCGGGCCHHHH------HHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred EEEEchhccCCCHHHH------HHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 111111 22 443322 27899999999999999998776543
No 224
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.21 E-value=3e-06 Score=77.80 Aligned_cols=99 Identities=9% Similarity=-0.031 Sum_probs=65.0
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccCC
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQNDG 243 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~~ 243 (355)
++.+|||+|||+|..+..+++.. ..|+++|+++.++ ++++.. . + +...|+..++.+- + + -
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~--~------~--~~~~d~~~~~~~~---~-~--f 115 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERG--FEVVLVDPSKEMLEVAREKGV--K------N--VVEAKAEDLPFPS---G-A--F 115 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHHTC--S------C--EEECCTTSCCSCT---T-C--E
T ss_pred CCCeEEEeCCCcCHHHHHHHHcC--CeEEEEeCCHHHHHHHHhhcC--C------C--EEECcHHHCCCCC---C-C--E
Confidence 78899999999999999988763 6899999999999 555443 1 1 4555654322110 0 0 0
Q ss_pred ccccchHHHHhh-hhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 244 VVHMSLKRIWEE-TGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 244 ~l~~~~~~l~~l-~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
++.+....+... .....+|+++.++|||||+++.++.+.
T Consensus 116 D~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 116 EAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp EEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred EEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 000000011111 223388999999999999999988764
No 225
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.21 E-value=7.3e-07 Score=87.87 Aligned_cols=115 Identities=17% Similarity=0.068 Sum_probs=74.4
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCCCCcc
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgsG~t~ 241 (355)
.+|.+|||++||+|..+..+|+.+ ..+|+|+|.++ ++ ++++++ . .+. .+|+++.+|...++.|..-.-+..
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~-~~~~a~~~~~--~--n~~~~~i~~i~~~~~~~~lpe~~Dvivs 155 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASA-IWQQAREVVR--F--NGLEDRVHVLPGPVETVELPEQVDAIVS 155 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-THHHHHHHHH--H--TTCTTTEEEEESCTTTCCCSSCEEEEEC
T ss_pred cCCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChH-HHHHHHHHHH--H--cCCCceEEEEeeeeeeecCCccccEEEe
Confidence 478999999999999888777764 35899999996 55 777766 3 233 468999998876555531000000
Q ss_pred CCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC--CCCCHH
Q psy7769 242 DGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS--PIQNDG 289 (355)
Q Consensus 242 ~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~--~~ENE~ 289 (355)
.|--.-+..-..+..++....++|||||.++-+.|+++ +.|.+.
T Consensus 156 ----E~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~atly~apie~~~ 201 (376)
T 4hc4_A 156 ----EWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIVPISDQM 201 (376)
T ss_dssp ----CCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHH
T ss_pred ----ecccccccccchhhhHHHHHHhhCCCCceECCccceEEEEEeccch
Confidence 01100011111233677778899999999998877754 556644
No 226
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.20 E-value=3.5e-06 Score=80.79 Aligned_cols=112 Identities=16% Similarity=0.081 Sum_probs=76.7
Q ss_pred hCCCC-CCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeee--cccC
Q psy7769 162 LNIRP-YDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVY--STCS 235 (355)
Q Consensus 162 L~~~p-G~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lD--aPCS 235 (355)
++..+ +.+|||+|||+|..+..+++..+..+++++|+ +..+ +++++. . .+. .++++..+|....+ .|-
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~~~~~~~~~- 247 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIH--A--HDLGGRVEFFEKNLLDARNFEGG- 247 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHH--H--TTCGGGEEEEECCTTCGGGGTTC-
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHH--h--cCCCCceEEEeCCcccCcccCCC-
Confidence 34556 88999999999999999998877789999999 7777 666666 2 233 46899999875433 221
Q ss_pred CCCCccCCc-cc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCC
Q psy7769 236 LSPIQNDGV-VH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPI 285 (355)
Q Consensus 236 gsG~t~~~~-l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ 285 (355)
+.-+..-.+ ++ |..... ..+|+++.+.|||||+|+.....+...
T Consensus 248 ~~D~v~~~~vlh~~~~~~~------~~~l~~~~~~L~pgG~l~i~e~~~~~~ 293 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREA------REVIGHAAGLVKPGGALLILTMTMNDD 293 (352)
T ss_dssp CEEEEEEESCGGGSCHHHH------HHHHHHHHHTEEEEEEEEEEEECCCTT
T ss_pred CccEEEEecccccCCHHHH------HHHHHHHHHHcCCCCEEEEEEeccCCC
Confidence 000000011 22 333221 278999999999999999987766544
No 227
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.16 E-value=9.1e-06 Score=78.96 Aligned_cols=114 Identities=6% Similarity=-0.092 Sum_probs=78.7
Q ss_pred hhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCC
Q psy7769 161 ALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLS 237 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgs 237 (355)
.++..++.+|||+|||+|..+..+++..+..+++++|+ +..+ +++++. . .+. .++++...|.. -+.|- +.
T Consensus 197 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~--~--~~l~~~v~~~~~d~~-~~~p~-~~ 269 (369)
T 3gwz_A 197 AYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLT--G--RGLADRCEILPGDFF-ETIPD-GA 269 (369)
T ss_dssp HSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH--H--TTCTTTEEEEECCTT-TCCCS-SC
T ss_pred hCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhh--h--cCcCCceEEeccCCC-CCCCC-Cc
Confidence 34567789999999999999999998876679999999 8888 777766 2 233 56899999875 12221 11
Q ss_pred CCccCCc-cc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCC
Q psy7769 238 PIQNDGV-VH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQN 287 (355)
Q Consensus 238 G~t~~~~-l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~EN 287 (355)
-+..-++ ++ |..... .++|+++.+.|||||+|+.....+.....
T Consensus 270 D~v~~~~vlh~~~d~~~------~~~L~~~~~~L~pgG~l~i~e~~~~~~~~ 315 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDDDV------VRILRRIATAMKPDSRLLVIDNLIDERPA 315 (369)
T ss_dssp SEEEEESCGGGSCHHHH------HHHHHHHHTTCCTTCEEEEEEEBCCSSCC
T ss_pred eEEEhhhhhccCCHHHH------HHHHHHHHHHcCCCCEEEEEEeccCCCCC
Confidence 1011111 22 333221 17899999999999999998877654433
No 228
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.16 E-value=4.3e-06 Score=79.66 Aligned_cols=108 Identities=11% Similarity=-0.053 Sum_probs=74.9
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCCCCc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLSPIQ 240 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgsG~t 240 (355)
..++.+|||+|||+|..+..+++..+..+++++|+ +..+ +++++. . .+. .++++..+|.. -+.|- +.-+.
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~--~--~~~~~~v~~~~~d~~-~~~p~-~~D~v 239 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFL--D--TGLSGRAQVVVGSFF-DPLPA-GAGGY 239 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH--H--TTCTTTEEEEECCTT-SCCCC-SCSEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhh--h--cCcCcCeEEecCCCC-CCCCC-CCcEE
Confidence 35578999999999999999998877789999999 8888 777766 2 233 56899999875 12221 11101
Q ss_pred cCCc-cc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 241 NDGV-VH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 241 ~~~~-l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
.-++ ++ |.... .+++|+++.+.|||||+|+........
T Consensus 240 ~~~~vlh~~~~~~------~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 240 VLSAVLHDWDDLS------AVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp EEESCGGGSCHHH------HHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred EEehhhccCCHHH------HHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 1111 22 43321 127899999999999999998766543
No 229
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.13 E-value=1.1e-05 Score=75.60 Aligned_cols=44 Identities=23% Similarity=0.147 Sum_probs=37.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcC-Cchhh--HHhhc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGA-SLLPV--LALNI 208 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~-s~~Rl--l~~~l 208 (355)
..+|.+|||+|||+|..+..++... .++|+++|+ ++.++ +++|+
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHH
T ss_pred hcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHH
Confidence 4578899999999999999888763 358999999 89999 78887
No 230
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.13 E-value=2.8e-06 Score=87.37 Aligned_cols=141 Identities=12% Similarity=-0.005 Sum_probs=90.4
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC------------------CCcEEEEcCCchhh--HHhh
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY------------------PDYYCMDGASLLPV--LALN 207 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~------------------~g~V~AvD~s~~Rl--l~~~ 207 (355)
||--..-+.+.+.++.+.+|.+|||.|||+|+..+.++..+. ...++++|+++..+ ++.|
T Consensus 151 fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~n 230 (541)
T 2ar0_A 151 YFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMN 230 (541)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHH
T ss_pred eeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHH
Confidence 555555566677888999999999999999999998886531 13799999999998 5556
Q ss_pred ccccccccCcce-----EEEEEecc-------------eeeecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhh
Q psy7769 208 IRPYDTVLDIHA-----LKLVKVGG-------------SVVYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKL 268 (355)
Q Consensus 208 l~r~~~~~g~~~-----v~~~~~Da-------------~~lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~ 268 (355)
+. . .+..+ +.+.++|. ...+||.++......+. .+.. .....+ ..+.+++++
T Consensus 231 l~--l--~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~-~~~~----~~~~~~~~Fl~~~l~~ 301 (541)
T 2ar0_A 231 CL--L--HDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITR-TFVH----PTSNKQLCFMQHIIET 301 (541)
T ss_dssp HH--T--TTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCS-CCSS----CCSCHHHHHHHHHHHH
T ss_pred HH--H--hCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHh-hcCC----CCCchHHHHHHHHHHH
Confidence 54 1 23322 44555543 33778886543110000 0100 012233 679999999
Q ss_pred ccCCcEEEEEeCC--CCCCCCHHHHHHHHHh
Q psy7769 269 VKVGGSVVYSTCS--LSPIQNDGVVHMSLKR 297 (355)
Q Consensus 269 LkpGG~lVYsTCS--l~~~ENE~vV~~~L~~ 297 (355)
|||||++++.+.. ++....+..+.+.|-+
T Consensus 302 Lk~gGr~a~V~p~~~L~~~~~~~~iR~~L~~ 332 (541)
T 2ar0_A 302 LHPGGRAAVVVPDNVLFEGGKGTDIRRDLMD 332 (541)
T ss_dssp EEEEEEEEEEEEHHHHHCCTHHHHHHHHHHH
T ss_pred hCCCCEEEEEecCcceecCcHHHHHHHHHhh
Confidence 9999999988653 3333335566555543
No 231
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.13 E-value=1.6e-06 Score=78.12 Aligned_cols=100 Identities=14% Similarity=0.061 Sum_probs=68.3
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc-eEEEEEeccee------eecccC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH-ALKLVKVGGSV------VYSTCS 235 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~-~v~~~~~Da~~------lDaPCS 235 (355)
.+.++|||++||.|..++.++...+..+|+|+|+|+.++ +++++. . .|.. ++.+ .|... .|+.++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~--~--~g~~~~v~~--~d~~~~~~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIG--K--LKTTIKYRF--LNKESDVYKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHH--H--SCCSSEEEE--ECCHHHHTTSEEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHH--h--cCCCccEEE--ecccccCCCCCcChhhH
Confidence 457799999999999999888776667999999999999 888887 3 3554 6666 44322 233331
Q ss_pred CCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEE-eCCCC
Q psy7769 236 LSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYS-TCSLS 283 (355)
Q Consensus 236 gsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYs-TCSl~ 283 (355)
++ -+.-+.+.+..+...++.|+|||.+|-- |-|+.
T Consensus 122 -----------~k--~LHlL~~~~~al~~v~~~L~pggvfISfptksl~ 157 (200)
T 3fzg_A 122 -----------LK--MLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLS 157 (200)
T ss_dssp -----------ET--CHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC
T ss_pred -----------hh--HHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhc
Confidence 11 1222211224455899999999888743 56764
No 232
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.13 E-value=8.9e-06 Score=78.87 Aligned_cols=51 Identities=25% Similarity=0.258 Sum_probs=43.6
Q ss_pred HHHhhCCCCCCeEeeecccCcchHHHHHHhc-CCCcEEEEcCCchhh-HHhhc
Q psy7769 158 PVLALNIRPYDTVLDMCAAPGGKTLVALQTL-YPDYYCMDGASLLPV-LALNI 208 (355)
Q Consensus 158 ~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~-~~g~V~AvD~s~~Rl-l~~~l 208 (355)
++..|.++||+.++|+|+|.||.|..|++.+ +.|+|+|+|.++..+ ..+++
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL 101 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTI 101 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTC
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhh
Confidence 4567789999999999999999999999876 459999999999999 43343
No 233
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.12 E-value=2.7e-06 Score=86.29 Aligned_cols=116 Identities=15% Similarity=0.034 Sum_probs=74.8
Q ss_pred hhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeeecccCCC
Q psy7769 161 ALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLS 237 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgs 237 (355)
.+...++.+|||+|||+|..+..+++. +..+|+|+|+++ ++ ++++++ . .+. .+++++.+|...++.|-
T Consensus 153 ~l~~~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~--~--~gl~~~v~~~~~d~~~~~~~~--- 223 (480)
T 3b3j_A 153 NHTDFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVK--S--NNLTDRIVVIPGKVEEVSLPE--- 223 (480)
T ss_dssp TGGGTTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHH--H--TTCTTTEEEEESCTTTCCCSS---
T ss_pred hhhhcCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHH--H--cCCCCcEEEEECchhhCccCC---
Confidence 344567899999999999999988874 346899999998 77 777776 3 344 57899999876533221
Q ss_pred CCccCCccccchHHHHhh--hhHHHHHHHHHhhccCCcEEEEEeCCCC--CCCCHH
Q psy7769 238 PIQNDGVVHMSLKRIWEE--TGCEIEIKHALKLVKVGGSVVYSTCSLS--PIQNDG 289 (355)
Q Consensus 238 G~t~~~~l~~~~~~l~~l--~~lQ~lL~~A~~~LkpGG~lVYsTCSl~--~~ENE~ 289 (355)
. -++.++..-.... ....+.+..+.++|||||.++.+.+++. +.+.+.
T Consensus 224 --~--fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~ 275 (480)
T 3b3j_A 224 --Q--VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQ 275 (480)
T ss_dssp --C--EEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHH
T ss_pred --C--eEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEeceeeeeccCchH
Confidence 0 0111110000111 1112567788999999999997665543 344443
No 234
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.10 E-value=3.3e-06 Score=78.71 Aligned_cols=79 Identities=14% Similarity=0.053 Sum_probs=63.7
Q ss_pred EEEechh-cHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEE
Q psy7769 148 YYCMDGA-SLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVK 224 (355)
Q Consensus 148 ~~~QD~a-S~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~ 224 (355)
-++.|+. ....+..+++.+|++|||+|||+|..|..++... ++|+|+|+++.++ +++++. . ..++++++
T Consensus 10 nFL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~--~----~~~v~~i~ 81 (255)
T 3tqs_A 10 HFLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYN--Q----QKNITIYQ 81 (255)
T ss_dssp CEECCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHT--T----CTTEEEEE
T ss_pred ccccCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHh--h----CCCcEEEE
Confidence 3455543 4456677889999999999999999999999875 7999999999999 777776 2 35789999
Q ss_pred ecceeeeccc
Q psy7769 225 VGGSVVYSTC 234 (355)
Q Consensus 225 ~Da~~lDaPC 234 (355)
+|+..+|.+-
T Consensus 82 ~D~~~~~~~~ 91 (255)
T 3tqs_A 82 NDALQFDFSS 91 (255)
T ss_dssp SCTTTCCGGG
T ss_pred cchHhCCHHH
Confidence 9998776553
No 235
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.09 E-value=5.4e-06 Score=80.24 Aligned_cols=122 Identities=14% Similarity=-0.026 Sum_probs=76.9
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee---------eec
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV---------VYS 232 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~---------lDa 232 (355)
...+.+|||+|||+|+.+..++...+..+|+++|+++.++ +++++.++.......+++++.+|+.. .|.
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 3456799999999999999998765457999999999999 77777521000122568888888643 222
Q ss_pred ccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHH
Q psy7769 233 TCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLK 296 (355)
Q Consensus 233 PCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~ 296 (355)
-.+.. ..+.......-..++++.+.++|+|||.++..+.+... ....++..++
T Consensus 198 Ii~d~---------~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~~~~ 250 (334)
T 1xj5_A 198 VIVDS---------SDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL--HMDIIEDIVS 250 (334)
T ss_dssp EEECC---------CCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT--CHHHHHHHHH
T ss_pred EEECC---------CCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccc--cHHHHHHHHH
Confidence 22100 00000000000128899999999999999998655432 3333444443
No 236
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.09 E-value=7.2e-06 Score=78.66 Aligned_cols=108 Identities=12% Similarity=-0.070 Sum_probs=70.0
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee--------eecccC
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV--------VYSTCS 235 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~--------lDaPCS 235 (355)
.+.+|||+|||.|+.+..++...+.++|+++|+++..+ +++++..+......++++++.+|+.. .|.-.+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 45799999999999999998765458999999999999 77777621000113568888888743 222221
Q ss_pred CCCCccCCccccchHHHHhhhhH-HHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 236 LSPIQNDGVVHMSLKRIWEETGC-EIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 236 gsG~t~~~~l~~~~~~l~~l~~l-Q~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
..- -.+.+. . ... +++++.+.++|+|||.++..+.+..
T Consensus 188 d~~------~~~~~~--~--~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 188 DSS------DPVGPA--E--SLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp CCC-----------------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred cCC------CCCCcc--h--hhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 100 001110 0 011 2789999999999999999876543
No 237
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.09 E-value=1.3e-05 Score=73.17 Aligned_cols=57 Identities=16% Similarity=0.117 Sum_probs=46.0
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc-eEEEEEec
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH-ALKLVKVG 226 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~-~v~~~~~D 226 (355)
++.+|||+|||+|..+..++.....++|+++|+++.++ +++|++ . .+.. ++.++++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~--~--~~~~~~v~~~~~d 124 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVE--Q--NNLSDLIKVVKVP 124 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH--H--TTCTTTEEEEECC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH--H--cCCCccEEEEEcc
Confidence 57899999999999999998876558999999999999 788876 3 2333 37777665
No 238
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.05 E-value=5.8e-06 Score=78.60 Aligned_cols=113 Identities=13% Similarity=-0.014 Sum_probs=69.3
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcccc-ccccCcceEEEEEecceeeecccCCCCCc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPY-DTVLDIHALKLVKVGGSVVYSTCSLSPIQ 240 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~-~~~~g~~~v~~~~~Da~~lDaPCSgsG~t 240 (355)
..++.+|||+|||.|+.+..++......+|+++|+++..+ +++++..+ .. ...+++.++..|+....... ..+ .
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~-~~~-~ 169 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRS-LADPRATVRVGDGLAFVRQT-PDN-T 169 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGG-GGCTTEEEEESCHHHHHHSS-CTT-C
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcc-cCCCcEEEEECcHHHHHHhc-cCC-c
Confidence 3567899999999999999998764457999999999999 66666310 10 12356888888875311100 000 0
Q ss_pred cCCccc--cchHHHHhhhhH--HHHHHHHHhhccCCcEEEEEeCC
Q psy7769 241 NDGVVH--MSLKRIWEETGC--EIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 241 ~~~~l~--~~~~~l~~l~~l--Q~lL~~A~~~LkpGG~lVYsTCS 281 (355)
.+--+. ..+. .....+ .++++.+.+.|||||+++..+.+
T Consensus 170 fDvIi~d~~~~~--~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 170 YDVVIIDTTDPA--GPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEEEEEECC-----------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred eeEEEECCCCcc--ccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 000000 0000 000111 27899999999999999987654
No 239
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.03 E-value=1.3e-05 Score=76.98 Aligned_cols=112 Identities=13% Similarity=0.020 Sum_probs=73.2
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhhHHhhccccccccCc-ceEEEEEecceeeecccCCCC
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPVLALNIRPYDTVLDI-HALKLVKVGGSVVYSTCSLSP 238 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rll~~~l~r~~~~~g~-~~v~~~~~Da~~lDaPCSgsG 238 (355)
..++..++.+|||+|||+|..+..+++..+..+++++|++. .+.+.+++ . .+. .++++..+|.. -..| +-..
T Consensus 178 ~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~~~~~~--~--~~~~~~v~~~~~d~~-~~~p-~~D~ 250 (348)
T 3lst_A 178 RAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVARHRLD--A--PDVAGRWKVVEGDFL-REVP-HADV 250 (348)
T ss_dssp HHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHTTCCCC--C--GGGTTSEEEEECCTT-TCCC-CCSE
T ss_pred HhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhhccccc--c--cCCCCCeEEEecCCC-CCCC-CCcE
Confidence 34466788999999999999999999987667899999842 22323333 1 122 46899999975 2223 1111
Q ss_pred CccCCccc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 239 IQNDGVVH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 239 ~t~~~~l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
+.....++ |..... .++|+++.+.|||||+|+.....+..
T Consensus 251 v~~~~vlh~~~d~~~------~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 251 HVLKRILHNWGDEDS------VRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp EEEESCGGGSCHHHH------HHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred EEEehhccCCCHHHH------HHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 11111122 433221 27899999999999999998765543
No 240
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.03 E-value=4.6e-06 Score=76.75 Aligned_cols=76 Identities=8% Similarity=0.001 Sum_probs=60.7
Q ss_pred EechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc
Q psy7769 150 CMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG 227 (355)
Q Consensus 150 ~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da 227 (355)
++.......+..+++.+|++|||+|||+|..|..+++.. ++|+|+|+++.++ +++++. . ..+++++++|+
T Consensus 14 ~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~--~----~~~v~~~~~D~ 85 (244)
T 1qam_A 14 TSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLV--D----HDNFQVLNKDI 85 (244)
T ss_dssp CCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTT--T----CCSEEEECCCG
T ss_pred CCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhc--c----CCCeEEEEChH
Confidence 333444555666778899999999999999999999886 7999999999999 777776 2 24789999998
Q ss_pred eeeecc
Q psy7769 228 SVVYST 233 (355)
Q Consensus 228 ~~lDaP 233 (355)
..++.+
T Consensus 86 ~~~~~~ 91 (244)
T 1qam_A 86 LQFKFP 91 (244)
T ss_dssp GGCCCC
T ss_pred HhCCcc
Confidence 776554
No 241
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.03 E-value=1.4e-05 Score=70.07 Aligned_cols=102 Identities=10% Similarity=-0.031 Sum_probs=65.4
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee---------ee
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV---------VY 231 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~---------lD 231 (355)
.+.+|.+|||+|||+|..+..++.. +..+|+++|+++.++ +++++. ++.++..|+.. +|
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~~~~~~D~v~~~ 117 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSEISGKYDTWIMN 117 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGGCCCCEEEEEEC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHHCCCCeeEEEEC
Confidence 4668899999999999999999887 335799999999999 666654 23555555432 33
Q ss_pred cccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 232 STCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 232 aPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
+|. .+.... ....+++.+++.+ |+ +|+.|.. .+...+...+..
T Consensus 118 ~p~-----------~~~~~~-----~~~~~l~~~~~~~--g~--~~~~~~~---~~~~~~~~~~~~ 160 (200)
T 1ne2_A 118 PPF-----------GSVVKH-----SDRAFIDKAFETS--MW--IYSIGNA---KARDFLRREFSA 160 (200)
T ss_dssp CCC-----------------------CHHHHHHHHHHE--EE--EEEEEEG---GGHHHHHHHHHH
T ss_pred CCc-----------hhccCc-----hhHHHHHHHHHhc--Cc--EEEEEcC---chHHHHHHHHHH
Confidence 332 111110 0015688888887 43 7777743 345556666654
No 242
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.03 E-value=6.8e-06 Score=78.34 Aligned_cols=77 Identities=12% Similarity=-0.044 Sum_probs=61.7
Q ss_pred EEechh-cHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEe
Q psy7769 149 YCMDGA-SLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKV 225 (355)
Q Consensus 149 ~~QD~a-S~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~ 225 (355)
|+.|+. ....+..+++.+|++|||+|||+|..|..+++.. ++|+|+|+++.++ +++++. +..+++++++
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~--~~V~aVEid~~li~~a~~~~~------~~~~v~vi~g 103 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNA--KKVYVIEIDKSLEPYANKLKE------LYNNIEIIWG 103 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCGGGHHHHHHHHH------HCSSEEEEES
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHhc------cCCCeEEEEC
Confidence 455543 4455677788999999999999999999999874 7999999999999 777765 2357899999
Q ss_pred cceeeecc
Q psy7769 226 GGSVVYST 233 (355)
Q Consensus 226 Da~~lDaP 233 (355)
|+..+|.+
T Consensus 104 D~l~~~~~ 111 (295)
T 3gru_A 104 DALKVDLN 111 (295)
T ss_dssp CTTTSCGG
T ss_pred chhhCCcc
Confidence 99766554
No 243
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.02 E-value=1.6e-05 Score=77.95 Aligned_cols=110 Identities=14% Similarity=0.022 Sum_probs=72.6
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcccccc-ccCc---ceEEEEEeccee----------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDT-VLDI---HALKLVKVGGSV---------- 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~-~~g~---~~v~~~~~Da~~---------- 229 (355)
.+.+|||+|+|.|+.+..++... ..+|+++|+++..+ +++++..+.. .... .+++++.+|+..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~-~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 46799999999999988887764 37899999999999 7777762110 0011 258888777642
Q ss_pred ------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCC
Q psy7769 230 ------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSP 284 (355)
Q Consensus 230 ------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~ 284 (355)
+|+|-...| ..+..+....-++.+++.+.+.|+|||.++.-+||.+.
T Consensus 267 ~fDvII~D~~d~P~~--------~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~ 319 (364)
T 2qfm_A 267 EFDYVINDLTAVPIS--------TSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL 319 (364)
T ss_dssp CEEEEEEECCSSCCC--------CC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC
T ss_pred CceEEEECCCCcccC--------cCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch
Confidence 666531111 01211211111126677789999999999999999887
No 244
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.01 E-value=5.6e-06 Score=79.13 Aligned_cols=107 Identities=11% Similarity=-0.085 Sum_probs=70.6
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccc-cCcceEEEEEeccee--------eecc
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTV-LDIHALKLVKVGGSV--------VYST 233 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~-~g~~~v~~~~~Da~~--------lDaP 233 (355)
..+.+|||+|||.|+.+..+++.....+|+++|+++..+ +++++..+... .+.++++++.+|+.. .|.-
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 345799999999999999988765457999999999999 67776511000 113568888888743 2222
Q ss_pred cCCCCCccCCcccc---chHHHHhhhhH--HHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 234 CSLSPIQNDGVVHM---SLKRIWEETGC--EIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 234 CSgsG~t~~~~l~~---~~~~l~~l~~l--Q~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
.+... ..+ .+ ...+ .+.++.+.+.|||||.++..+.+.
T Consensus 156 i~d~~------~~~~~~~~-----~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 198 (314)
T 1uir_A 156 IIDLT------DPVGEDNP-----ARLLYTVEFYRLVKAHLNPGGVMGMQTGMI 198 (314)
T ss_dssp EEECC------CCBSTTCG-----GGGGSSHHHHHHHHHTEEEEEEEEEEEEEE
T ss_pred EECCC------CcccccCc-----chhccHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 11000 001 11 0112 278999999999999999886554
No 245
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.00 E-value=9e-06 Score=78.32 Aligned_cols=102 Identities=6% Similarity=-0.144 Sum_probs=70.8
Q ss_pred CeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee---------eecccCC
Q psy7769 168 DTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV---------VYSTCSL 236 (355)
Q Consensus 168 ~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~---------lDaPCSg 236 (355)
.+|||+|||.|+.+..+++.....+|+++|+++..+ +++++. . ....+++++..|+.. .|+-.+.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~--~--~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFD--I--PRAPRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSC--C--CCTTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcc--c--cCCCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 499999999999999999876567999999999999 677776 2 234678888888753 2222211
Q ss_pred CCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 237 SPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 237 sG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
.- ... ..+..+ . .++.++.+.+.|+|||.++..+.+-
T Consensus 167 ~~-~~~----~~~~~L---~-t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 167 VF-AGA----ITPQNF---T-TVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp CS-TTS----CCCGGG---S-BHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred CC-Ccc----ccchhh---h-HHHHHHHHHHhcCCCcEEEEEecCC
Confidence 00 000 001101 0 1278999999999999999888764
No 246
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.00 E-value=1.4e-05 Score=75.51 Aligned_cols=107 Identities=9% Similarity=-0.035 Sum_probs=71.2
Q ss_pred CeEeeecccC--cchHHHHHHhc-CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeee----cc--cCC
Q psy7769 168 DTVLDMCAAP--GGKTLVALQTL-YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVY----ST--CSL 236 (355)
Q Consensus 168 ~~VLD~CAgP--GgKT~~la~~~-~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lD----aP--CSg 236 (355)
..|||++||. |+.+..+++.. ...+|+++|.|+.++ .+.++. . .+..++.++..|....+ .| -.+
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~--~--~~~~~~~~v~aD~~~~~~~l~~~~~~~~ 155 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLA--S--TPEGRTAYVEADMLDPASILDAPELRDT 155 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHC--C--CSSSEEEEEECCTTCHHHHHTCHHHHTT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhc--c--CCCCcEEEEEecccChhhhhcccccccc
Confidence 6899999997 66677777754 458999999999999 666665 2 22347899999986532 11 011
Q ss_pred CC------CccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 237 SP------IQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 237 sG------~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+- +.....++|-++.- ..+.+|+...+.|+|||+|+.++-+-
T Consensus 156 ~D~~~p~av~~~avLH~l~d~~----~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 156 LDLTRPVALTVIAIVHFVLDED----DAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp CCTTSCCEEEEESCGGGSCGGG----CHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred cCcCCcchHHhhhhHhcCCchh----hHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 10 00000033433210 01278999999999999999998664
No 247
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.98 E-value=3.5e-05 Score=74.55 Aligned_cols=114 Identities=8% Similarity=-0.043 Sum_probs=78.5
Q ss_pred hhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCC
Q psy7769 161 ALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSP 238 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG 238 (355)
.++..++.+|||++||+|..+..+++..+..+++..|. +..+ +++++. . .+..+|+++.+|... |++-.+.-
T Consensus 174 ~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~--~--~~~~rv~~~~gD~~~-~~~~~~D~ 247 (353)
T 4a6d_A 174 AFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFS--F--QEEEQIDFQEGDFFK-DPLPEADL 247 (353)
T ss_dssp SSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSC--C----CCSEEEEESCTTT-SCCCCCSE
T ss_pred hcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhh--h--cccCceeeecCcccc-CCCCCceE
Confidence 33556778999999999999999999887778888887 5556 666665 2 345789999999753 22211111
Q ss_pred CccCCc-cc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCC
Q psy7769 239 IQNDGV-VH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQN 287 (355)
Q Consensus 239 ~t~~~~-l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~EN 287 (355)
..-++ ++ |..+... +||+++.+.|+|||+|+....-+.+..+
T Consensus 248 -~~~~~vlh~~~d~~~~------~iL~~~~~al~pgg~lli~e~~~~~~~~ 291 (353)
T 4a6d_A 248 -YILARVLHDWADGKCS------HLLERIYHTCKPGGGILVIESLLDEDRR 291 (353)
T ss_dssp -EEEESSGGGSCHHHHH------HHHHHHHHHCCTTCEEEEEECCCCTTSC
T ss_pred -EEeeeecccCCHHHHH------HHHHHHHhhCCCCCEEEEEEeeeCCCCC
Confidence 11111 32 5544322 7899999999999999998876655443
No 248
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.98 E-value=2e-05 Score=77.69 Aligned_cols=66 Identities=17% Similarity=-0.008 Sum_probs=52.5
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCC--------------------------------------CcEEEEcCCch
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYP--------------------------------------DYYCMDGASLL 201 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~--------------------------------------g~V~AvD~s~~ 201 (355)
.+.+.++++.|||.+||+|+..+.+|.+..+ ..|+++|+++.
T Consensus 188 ~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~ 267 (384)
T 3ldg_A 188 LLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGR 267 (384)
T ss_dssp HHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHH
T ss_pred HHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHH
Confidence 4456788999999999999999988876432 46999999999
Q ss_pred hh--HHhhccccccccCcc-eEEEEEeccee
Q psy7769 202 PV--LALNIRPYDTVLDIH-ALKLVKVGGSV 229 (355)
Q Consensus 202 Rl--l~~~l~r~~~~~g~~-~v~~~~~Da~~ 229 (355)
++ +++|++ . .|.. .+.+.+.|+..
T Consensus 268 al~~Ar~Na~--~--~gl~~~I~~~~~D~~~ 294 (384)
T 3ldg_A 268 MVEIARKNAR--E--VGLEDVVKLKQMRLQD 294 (384)
T ss_dssp HHHHHHHHHH--H--TTCTTTEEEEECCGGG
T ss_pred HHHHHHHHHH--H--cCCCCceEEEECChHH
Confidence 99 888988 3 3553 48888888754
No 249
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.97 E-value=2e-05 Score=77.67 Aligned_cols=67 Identities=6% Similarity=-0.122 Sum_probs=53.3
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcCC--------------------------------------CcEEEEcCCch
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLYP--------------------------------------DYYCMDGASLL 201 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~--------------------------------------g~V~AvD~s~~ 201 (355)
.+.+..+|..|||.|||+|+.++.+|.+..+ ..|+++|+++.
T Consensus 189 ~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ 268 (385)
T 3ldu_A 189 YLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEE 268 (385)
T ss_dssp HTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHH
T ss_pred HhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHH
Confidence 4456778999999999999999998876422 57999999999
Q ss_pred hh--HHhhccccccccCc-ceEEEEEecceee
Q psy7769 202 PV--LALNIRPYDTVLDI-HALKLVKVGGSVV 230 (355)
Q Consensus 202 Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~l 230 (355)
++ ++.|+. . .|. .++.+.+.|+..+
T Consensus 269 ai~~Ar~Na~--~--~gl~~~i~~~~~D~~~l 296 (385)
T 3ldu_A 269 SIDIARENAE--I--AGVDEYIEFNVGDATQF 296 (385)
T ss_dssp HHHHHHHHHH--H--HTCGGGEEEEECCGGGC
T ss_pred HHHHHHHHHH--H--cCCCCceEEEECChhhc
Confidence 99 888887 3 344 3688888887653
No 250
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.96 E-value=7.3e-06 Score=81.59 Aligned_cols=82 Identities=10% Similarity=-0.066 Sum_probs=58.7
Q ss_pred echhcHHHHHhh--CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEec
Q psy7769 151 MDGASLLPVLAL--NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVG 226 (355)
Q Consensus 151 QD~aS~l~~~~L--~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~D 226 (355)
|..++..++..- ...+|.+|||+|||+|..++.++... ++|+++|+|+.++ +++|++ .+..|..+++++++|
T Consensus 76 eQat~e~vA~~~a~~l~~g~~VLDLgcG~G~~al~LA~~g--~~V~~VD~s~~~l~~Ar~N~~--~~~~gl~~i~~i~~D 151 (410)
T 3ll7_A 76 EQSSGAVTSSYKSRFIREGTKVVDLTGGLGIDFIALMSKA--SQGIYIERNDETAVAARHNIP--LLLNEGKDVNILTGD 151 (410)
T ss_dssp HHSCCHHHHHHGGGGSCTTCEEEESSCSSSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHH--HHSCTTCEEEEEESC
T ss_pred hhcCHHHHHHHHHHhcCCCCEEEEeCCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHhHH--HhccCCCcEEEEECc
Confidence 344454444321 13359999999999999999988764 7999999999999 888887 310145678888777
Q ss_pred ce--------------eeecccCC
Q psy7769 227 GS--------------VVYSTCSL 236 (355)
Q Consensus 227 a~--------------~lDaPCSg 236 (355)
+. .+|||-.+
T Consensus 152 a~~~L~~~~~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 152 FKEYLPLIKTFHPDYIYVDPARRS 175 (410)
T ss_dssp GGGSHHHHHHHCCSEEEECCEEC-
T ss_pred HHHhhhhccCCCceEEEECCCCcC
Confidence 53 27888754
No 251
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.95 E-value=1.5e-05 Score=75.09 Aligned_cols=76 Identities=13% Similarity=-0.047 Sum_probs=61.7
Q ss_pred EEEech-hcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEE
Q psy7769 148 YYCMDG-ASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVK 224 (355)
Q Consensus 148 ~~~QD~-aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~ 224 (355)
-++.|+ -....+..+++.+| +|||+|||+|..|..+++.. ++|+|+|+++.++ +++++. . .++++++
T Consensus 28 nfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~--~-----~~v~vi~ 97 (271)
T 3fut_A 28 NFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLS--G-----LPVRLVF 97 (271)
T ss_dssp CEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTT--T-----SSEEEEE
T ss_pred cccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcC--C-----CCEEEEE
Confidence 455554 34556677789999 99999999999999999875 7999999999999 777765 2 4689999
Q ss_pred ecceeeecc
Q psy7769 225 VGGSVVYST 233 (355)
Q Consensus 225 ~Da~~lDaP 233 (355)
+|+..+|.+
T Consensus 98 ~D~l~~~~~ 106 (271)
T 3fut_A 98 QDALLYPWE 106 (271)
T ss_dssp SCGGGSCGG
T ss_pred CChhhCChh
Confidence 999877665
No 252
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.94 E-value=5.2e-06 Score=81.57 Aligned_cols=101 Identities=7% Similarity=-0.113 Sum_probs=65.7
Q ss_pred HHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc-------ee
Q psy7769 159 VLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG-------SV 229 (355)
Q Consensus 159 ~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da-------~~ 229 (355)
...+.+.++.+|||+|||+|..+..++... ..|+++|+|+.++ ++++-. ......+...|+ ..
T Consensus 100 ~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~~~~~~l~~~~~~ 171 (416)
T 4e2x_A 100 LATELTGPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREKGI------RVRTDFFEKATADDVRRTEGP 171 (416)
T ss_dssp HHTTTCSSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTTTC------CEECSCCSHHHHHHHHHHHCC
T ss_pred HHHhCCCCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHcCC------CcceeeechhhHhhcccCCCC
Confidence 344566789999999999999999998864 5899999999998 443311 100000111111 11
Q ss_pred eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeC
Q psy7769 230 VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-.+... +..+.....+|+++.++|||||+++.++-
T Consensus 172 fD~I~~~~v-------------l~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 172 ANVIYAANT-------------LCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEEEEEESC-------------GGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEECCh-------------HHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 444442211 22222334889999999999999999864
No 253
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.92 E-value=1.6e-05 Score=75.10 Aligned_cols=79 Identities=11% Similarity=-0.035 Sum_probs=60.9
Q ss_pred EEEech-hcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCC--CcEEEEcCCchhh--HHhhccccccccCcceEEE
Q psy7769 148 YYCMDG-ASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYP--DYYCMDGASLLPV--LALNIRPYDTVLDIHALKL 222 (355)
Q Consensus 148 ~~~QD~-aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~--g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~ 222 (355)
-++.|+ -....+..+++.+|++|||+|||+|..|..++..... ++|+|+|+++.++ ++++. ..++++
T Consensus 23 ~fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--------~~~v~~ 94 (279)
T 3uzu_A 23 NFLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--------GELLEL 94 (279)
T ss_dssp CEECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--------GGGEEE
T ss_pred cccCCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--------CCCcEE
Confidence 345553 3445567778899999999999999999999987632 5599999999999 66552 135889
Q ss_pred EEecceeeeccc
Q psy7769 223 VKVGGSVVYSTC 234 (355)
Q Consensus 223 ~~~Da~~lDaPC 234 (355)
+++|+..+|.+-
T Consensus 95 i~~D~~~~~~~~ 106 (279)
T 3uzu_A 95 HAGDALTFDFGS 106 (279)
T ss_dssp EESCGGGCCGGG
T ss_pred EECChhcCChhH
Confidence 999998776654
No 254
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.91 E-value=2.8e-06 Score=77.90 Aligned_cols=124 Identities=10% Similarity=-0.012 Sum_probs=78.9
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEe
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKV 225 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~ 225 (355)
|..+.......+..+++.+|++|||+|||+|..|..++... ++|+|+|+++.++ +++++. +..+++++.+
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~------~~~~v~~~~~ 82 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLK------LNTRVTLIHQ 82 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTT------TCSEEEECCS
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhc------cCCceEEEEC
Confidence 44455556667778888999999999999999999999875 7999999999998 655554 2357888888
Q ss_pred cceeeecccC-CCCCccCCccccchHHHHhhh---hHH-HHH----HHHHhhccCCcEEEEEe
Q psy7769 226 GGSVVYSTCS-LSPIQNDGVVHMSLKRIWEET---GCE-IEI----KHALKLVKVGGSVVYST 279 (355)
Q Consensus 226 Da~~lDaPCS-gsG~t~~~~l~~~~~~l~~l~---~lQ-~lL----~~A~~~LkpGG~lVYsT 279 (355)
|+..++.+-. ..-+........+...+.... ... ..+ +.+.++|+|||+++..+
T Consensus 83 D~~~~~~~~~~~f~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 83 DILQFQFPNKQRYKIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CCTTTTCCCSSEEEEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred ChhhcCcccCCCcEEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 8765443210 000000000001111111111 111 334 77999999999876654
No 255
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.91 E-value=1.3e-05 Score=74.49 Aligned_cols=71 Identities=10% Similarity=-0.130 Sum_probs=54.6
Q ss_pred cHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeec
Q psy7769 155 SLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYS 232 (355)
Q Consensus 155 S~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDa 232 (355)
....+..+++.+|++|||+|||+|..|. ++. ...++|+|+|+++.++ +++++. . .++++++++|+..+|.
T Consensus 10 ~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~--~----~~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 10 IDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPF--L----GPKLTIYQQDAMTFNF 81 (252)
T ss_dssp HHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTT--T----GGGEEEECSCGGGCCH
T ss_pred HHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhc--c----CCceEEEECchhhCCH
Confidence 3345566788999999999999999999 653 3223399999999999 777766 2 2578999999977654
Q ss_pred c
Q psy7769 233 T 233 (355)
Q Consensus 233 P 233 (355)
+
T Consensus 82 ~ 82 (252)
T 1qyr_A 82 G 82 (252)
T ss_dssp H
T ss_pred H
Confidence 3
No 256
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.90 E-value=4.1e-05 Score=74.47 Aligned_cols=105 Identities=10% Similarity=-0.002 Sum_probs=70.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhhHHhhccccccccCcceEEEEEecceeeecccCCCCCccCC
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPVLALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQNDG 243 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rll~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~~ 243 (355)
..++.+|||+|||+|..+..+++..+..+++++|+ +..+ ...+ . ..+++++.+|... +.| .+.-+....
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~--~~a~--~----~~~v~~~~~d~~~-~~p-~~D~v~~~~ 269 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVI--QDAP--A----FSGVEHLGGDMFD-GVP-KGDAIFIKW 269 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH--TTCC--C----CTTEEEEECCTTT-CCC-CCSEEEEES
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHH--Hhhh--h----cCCCEEEecCCCC-CCC-CCCEEEEec
Confidence 45678999999999999999999887788999999 6555 1122 1 1457888888753 223 111100000
Q ss_pred ccc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCC
Q psy7769 244 VVH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPI 285 (355)
Q Consensus 244 ~l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ 285 (355)
.++ |...... ++|+++.+.|||||+|+.....+...
T Consensus 270 vlh~~~~~~~~------~~l~~~~~~L~pgG~l~i~e~~~~~~ 306 (368)
T 3reo_A 270 ICHDWSDEHCL------KLLKNCYAALPDHGKVIVAEYILPPS 306 (368)
T ss_dssp CGGGBCHHHHH------HHHHHHHHHSCTTCEEEEEECCCCSS
T ss_pred hhhcCCHHHHH------HHHHHHHHHcCCCCEEEEEEeccCCC
Confidence 022 4433221 78999999999999999988776443
No 257
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.88 E-value=5.2e-05 Score=73.67 Aligned_cols=104 Identities=12% Similarity=-0.036 Sum_probs=71.5
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhhHHhhccccccccCcceEEEEEecceeeecccCCCCCccCC
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPVLALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQNDG 243 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rll~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~~ 243 (355)
..++.+|||+|||+|..+..+++..+..+++++|+ +..+ ...+ . ..+++++.+|... +.|- +.- ..-.
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~--~~a~--~----~~~v~~~~~D~~~-~~p~-~D~-v~~~ 266 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVI--SEAP--Q----FPGVTHVGGDMFK-EVPS-GDT-ILMK 266 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH--TTCC--C----CTTEEEEECCTTT-CCCC-CSE-EEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHH--Hhhh--h----cCCeEEEeCCcCC-CCCC-CCE-EEeh
Confidence 56788999999999999999999877788999999 6554 1122 1 1458899999754 3331 111 0111
Q ss_pred c-cc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCC
Q psy7769 244 V-VH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPI 285 (355)
Q Consensus 244 ~-l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ 285 (355)
+ ++ |..+... ++|+++.+.|||||+|+.....+...
T Consensus 267 ~vlh~~~d~~~~------~~L~~~~~~L~pgG~l~i~e~~~~~~ 304 (364)
T 3p9c_A 267 WILHDWSDQHCA------TLLKNCYDALPAHGKVVLVQCILPVN 304 (364)
T ss_dssp SCGGGSCHHHHH------HHHHHHHHHSCTTCEEEEEECCBCSS
T ss_pred HHhccCCHHHHH------HHHHHHHHHcCCCCEEEEEEeccCCC
Confidence 1 22 4433222 78999999999999999988776443
No 258
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.84 E-value=3.3e-05 Score=72.08 Aligned_cols=110 Identities=10% Similarity=-0.077 Sum_probs=74.1
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee----eecccCCCCC
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV----VYSTCSLSPI 239 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~----lDaPCSgsG~ 239 (355)
.+.+|||+|||.|+.+..++.. + ++|+++|+++..+ +++++..+......+++.++.+|+.. .|+-.+...
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d~~- 148 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQE- 148 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEESSC-
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEECCC-
Confidence 4579999999999999988877 6 8999999999999 66666511000112468888888753 344432110
Q ss_pred ccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 240 QNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 240 t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
.+. ..++.+.+.|+|||.++..+++.. .+...+..+++.
T Consensus 149 --------dp~---------~~~~~~~~~L~pgG~lv~~~~~~~--~~~~~~~~~~~~ 187 (262)
T 2cmg_A 149 --------PDI---------HRIDGLKRMLKEDGVFISVAKHPL--LEHVSMQNALKN 187 (262)
T ss_dssp --------CCH---------HHHHHHHTTEEEEEEEEEEEECTT--TCHHHHHHHHHH
T ss_pred --------ChH---------HHHHHHHHhcCCCcEEEEEcCCcc--cCHHHHHHHHHH
Confidence 111 368899999999999999876643 233444444443
No 259
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.82 E-value=7.7e-05 Score=73.67 Aligned_cols=67 Identities=10% Similarity=-0.019 Sum_probs=52.9
Q ss_pred HHhhCCCCCCeEeeecccCcchHHHHHHhcCC--------------------------------------CcEEEEcCCc
Q psy7769 159 VLALNIRPYDTVLDMCAAPGGKTLVALQTLYP--------------------------------------DYYCMDGASL 200 (355)
Q Consensus 159 ~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~--------------------------------------g~V~AvD~s~ 200 (355)
+.+.+..++..|||.|||+|..++.+|.+..+ ..|+++|+++
T Consensus 194 l~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~ 273 (393)
T 3k0b_A 194 VLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDA 273 (393)
T ss_dssp HHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCH
T ss_pred HHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCH
Confidence 34556788999999999999999988876432 4699999999
Q ss_pred hhh--HHhhccccccccCcc-eEEEEEeccee
Q psy7769 201 LPV--LALNIRPYDTVLDIH-ALKLVKVGGSV 229 (355)
Q Consensus 201 ~Rl--l~~~l~r~~~~~g~~-~v~~~~~Da~~ 229 (355)
.++ ++.|+. . .|.. ++.+.+.|+..
T Consensus 274 ~al~~Ar~Na~--~--~gl~~~I~~~~~D~~~ 301 (393)
T 3k0b_A 274 RLIEIAKQNAV--E--AGLGDLITFRQLQVAD 301 (393)
T ss_dssp HHHHHHHHHHH--H--TTCTTCSEEEECCGGG
T ss_pred HHHHHHHHHHH--H--cCCCCceEEEECChHh
Confidence 999 888888 3 3543 47888888754
No 260
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.79 E-value=2.2e-05 Score=69.97 Aligned_cols=94 Identities=12% Similarity=0.010 Sum_probs=58.9
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccCC
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQNDG 243 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~~ 243 (355)
++.+|||+|||+|..+..++.. +++|+++.++ ++++ ++.+...|...++.+- + .-
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~~~~~---~---~f 103 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------GVFVLKGTAENLPLKD---E---SF 103 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------TCEEEECBTTBCCSCT---T---CE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------CCEEEEcccccCCCCC---C---Ce
Confidence 4889999999999998877543 9999999988 4433 1345555553322110 0 00
Q ss_pred ccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCC
Q psy7769 244 VVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 244 ~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
++.+...-+..+...+.+|+.+.++|+|||.++.++...
T Consensus 104 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 104 DFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp EEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred eEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 011111111122233478999999999999999987643
No 261
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.78 E-value=5.3e-05 Score=66.93 Aligned_cols=116 Identities=10% Similarity=-0.019 Sum_probs=70.0
Q ss_pred HHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeeccc
Q psy7769 157 LPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTC 234 (355)
Q Consensus 157 l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPC 234 (355)
+...+....++.+|||+|||+|..+..++ ..|+++|+++..+ ....+. . ... .++ .+|.-.
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~~~~~~~~d~~--~--~~~-------~~~-~fD~v~ 120 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR-----NPVHCFDLASLDPRVTVCDMA--Q--VPL-------EDE-SVDVAV 120 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCSSTTEEESCTT--S--CSC-------CTT-CEEEEE
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCCCceEEEeccc--c--CCC-------CCC-CEeEEE
Confidence 44444445688999999999999877662 6899999998643 111111 0 000 000 123222
Q ss_pred CCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccCceEEE
Q psy7769 235 SLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEI 308 (355)
Q Consensus 235 SgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~ 308 (355)
+... +++ .....+|+++.++|+|||.++.+++... ..+...+...|++ .|+++..
T Consensus 121 ~~~~------l~~--------~~~~~~l~~~~~~L~~gG~l~i~~~~~~-~~~~~~~~~~l~~----~Gf~~~~ 175 (215)
T 2zfu_A 121 FCLS------LMG--------TNIRDFLEEANRVLKPGGLLKVAEVSSR-FEDVRTFLRAVTK----LGFKIVS 175 (215)
T ss_dssp EESC------CCS--------SCHHHHHHHHHHHEEEEEEEEEEECGGG-CSCHHHHHHHHHH----TTEEEEE
T ss_pred Eehh------ccc--------cCHHHHHHHHHHhCCCCeEEEEEEcCCC-CCCHHHHHHHHHH----CCCEEEE
Confidence 1111 111 1223789999999999999999887642 2366677777765 3544433
No 262
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.77 E-value=4e-05 Score=78.82 Aligned_cols=145 Identities=12% Similarity=0.010 Sum_probs=87.9
Q ss_pred EEEechhcHHHHHhhC----CCCCCeEeeecccCcchHHHHHHhcC---CCcEEEEcCCchhh--HHhhccccccccCc-
Q psy7769 148 YYCMDGASLLPVLALN----IRPYDTVLDMCAAPGGKTLVALQTLY---PDYYCMDGASLLPV--LALNIRPYDTVLDI- 217 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~----~~pG~~VLD~CAgPGgKT~~la~~~~---~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~- 217 (355)
||--..-+.+.+.++. +.+|.+|||.|||+|+..+.++..+. ...++|+|+++..+ ++.|+. . .|.
T Consensus 199 fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~--l--~gi~ 274 (542)
T 3lkd_A 199 FYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMI--L--HGVP 274 (542)
T ss_dssp CCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHH--H--TTCC
T ss_pred ecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHH--H--cCCC
Confidence 4444444555566665 67899999999999999998887642 46899999999988 555654 1 233
Q ss_pred -ceEEEEEecce---------------eeecccCCCCCccCCc----cccchHH-HHhhhhHH-HHHHHHHhhcc-CCcE
Q psy7769 218 -HALKLVKVGGS---------------VVYSTCSLSPIQNDGV----VHMSLKR-IWEETGCE-IEIKHALKLVK-VGGS 274 (355)
Q Consensus 218 -~~v~~~~~Da~---------------~lDaPCSgsG~t~~~~----l~~~~~~-l~~l~~lQ-~lL~~A~~~Lk-pGG~ 274 (355)
.++.+.++|.. ...||.++.. ..... .+|.... +....... ..+.++++.|+ +||+
T Consensus 275 ~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~-~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr 353 (542)
T 3lkd_A 275 IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKW-SASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGV 353 (542)
T ss_dssp GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCC-CCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCE
T ss_pred cCccceEecceecccccccccccccEEEecCCcCCcc-ccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCcee
Confidence 45566665542 2566664321 11100 0111100 11112223 57999999999 9999
Q ss_pred EEEEeCC--CCCCCCHHHHHHHHHh
Q psy7769 275 VVYSTCS--LSPIQNDGVVHMSLKR 297 (355)
Q Consensus 275 lVYsTCS--l~~~ENE~vV~~~L~~ 297 (355)
+++.+-. ++..-.+..+++.|-+
T Consensus 354 ~a~VlP~g~Lf~~~~~~~iRk~Lle 378 (542)
T 3lkd_A 354 MAIVLPHGVLFRGNAEGTIRKALLE 378 (542)
T ss_dssp EEEEEETHHHHCCTHHHHHHHHHHH
T ss_pred EEEEecchHhhCCchhHHHHHHHHh
Confidence 9876543 2222225667766654
No 263
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.76 E-value=6.3e-05 Score=74.77 Aligned_cols=91 Identities=12% Similarity=0.019 Sum_probs=64.4
Q ss_pred CCCeEeeeccc------CcchHHHHHHhc-CCCcEEEEcCCchhhHHhhccccccccCcceEEEEEeccee---------
Q psy7769 166 PYDTVLDMCAA------PGGKTLVALQTL-YPDYYCMDGASLLPVLALNIRPYDTVLDIHALKLVKVGGSV--------- 229 (355)
Q Consensus 166 pG~~VLD~CAg------PGgKT~~la~~~-~~g~V~AvD~s~~Rll~~~l~r~~~~~g~~~v~~~~~Da~~--------- 229 (355)
++.+|||+||| +|+.++.++... ..++|+++|+++.+. . ...+++++++|+..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-----~------~~~rI~fv~GDa~dlpf~~~l~~ 284 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-----V------DELRIRTIQGDQNDAEFLDRIAR 284 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-----G------CBTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-----h------cCCCcEEEEecccccchhhhhhc
Confidence 56899999999 788888888754 568999999999763 1 12467888888754
Q ss_pred ----eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 230 ----VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
+|...+. | .++ ....+..|++++++|||||+++.....
T Consensus 285 ~d~sFDlVisd-g------sH~-------~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 285 RYGPFDIVIDD-G------SHI-------NAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHCCEEEEEEC-S------CCC-------HHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ccCCccEEEEC-C------ccc-------chhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 2333211 1 011 112237899999999999999998554
No 264
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.73 E-value=5.6e-05 Score=71.28 Aligned_cols=39 Identities=13% Similarity=-0.082 Sum_probs=31.0
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCch
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLL 201 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~ 201 (355)
.++++.+|||+||||||++..+++..+.+.|+++|+...
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvD 109 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRD 109 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEecc
Confidence 357899999999999999988877644457788887743
No 265
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.70 E-value=2.6e-05 Score=72.28 Aligned_cols=72 Identities=22% Similarity=0.099 Sum_probs=57.2
Q ss_pred hhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceee
Q psy7769 153 GASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVV 230 (355)
Q Consensus 153 ~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~l 230 (355)
.-....+..+++.+|++|||+|||+|..|..++.. +.++|+|+|+++.++ ++++ . . .+++++++|+..+
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~--~-----~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G--D-----ERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C--C-----TTEEEECSCTTTC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c--C-----CCeEEEEcchhhC
Confidence 33445567778889999999999999999999876 237999999999998 6555 3 1 3688999998776
Q ss_pred ecc
Q psy7769 231 YST 233 (355)
Q Consensus 231 DaP 233 (355)
|.+
T Consensus 89 ~~~ 91 (249)
T 3ftd_A 89 PFC 91 (249)
T ss_dssp CGG
T ss_pred Chh
Confidence 655
No 266
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.69 E-value=7.9e-05 Score=70.90 Aligned_cols=101 Identities=12% Similarity=-0.043 Sum_probs=59.2
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhhHHhh-ccccccccCcceEEEE-----------Eecceeee
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPVLALN-IRPYDTVLDIHALKLV-----------KVGGSVVY 231 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rll~~~-l~r~~~~~g~~~v~~~-----------~~Da~~lD 231 (355)
.++|.+|||+||||||++..+++..+-..|+++|+......... .. . .+...+.+. ..|....|
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~--~--~~~~iv~~~~~~di~~l~~~~~DlVlsD 154 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQ--T--LGWNIVKFKDKSNVFTMPTEPSDTLLCD 154 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCC--B--TTGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccccc--c--cCCceEEeecCceeeecCCCCcCEEeec
Confidence 46899999999999999999987654357889999754220000 00 0 011111111 11222244
Q ss_pred cccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCC-cEEEEEeCC
Q psy7769 232 STCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVG-GSVVYSTCS 281 (355)
Q Consensus 232 aPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpG-G~lVYsTCS 281 (355)
.-.+ +|. |. +.+ ..+ .||.-|..+|+|| |.+|.-.--
T Consensus 155 ~APn-sG~-------~~---~D~--~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 155 IGES-SSN-------PL---VER--DRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCC-CSS-------HH---HHH--HHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CcCC-CCC-------HH---HHH--HHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 4444 552 11 111 123 6799999999999 999986444
No 267
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.66 E-value=7.9e-05 Score=72.24 Aligned_cols=99 Identities=13% Similarity=0.033 Sum_probs=67.5
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhhHHhhccccccccCcceEEEEEeccee----eecccCCCCC
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPVLALNIRPYDTVLDIHALKLVKVGGSV----VYSTCSLSPI 239 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rll~~~l~r~~~~~g~~~v~~~~~Da~~----lDaPCSgsG~ 239 (355)
..++.+|||+|||+|..+..+++..+..+++++|+ +..+ +..+ . ..++.++.+|... .|+-.+..
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~--~~a~--~----~~~v~~~~~d~~~~~~~~D~v~~~~-- 275 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVI--ENAP--P----LSGIEHVGGDMFASVPQGDAMILKA-- 275 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH--TTCC--C----CTTEEEEECCTTTCCCCEEEEEEES--
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHH--Hhhh--h----cCCCEEEeCCcccCCCCCCEEEEec--
Confidence 56788999999999999999999876678999999 7665 1122 1 1347888888743 22222110
Q ss_pred ccCCccc-cchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 240 QNDGVVH-MSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 240 t~~~~l~-~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
.++ |.... ..++|+++.+.|||||+|+.+...+.
T Consensus 276 ----~lh~~~d~~------~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 276 ----VCHNWSDEK------CIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp ----SGGGSCHHH------HHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred ----ccccCCHHH------HHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 022 32221 11789999999999999998865543
No 268
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.66 E-value=2.5e-05 Score=72.78 Aligned_cols=68 Identities=21% Similarity=0.022 Sum_probs=51.8
Q ss_pred cHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCc-------hhh--HHhhccccccccCcce-EEEEE
Q psy7769 155 SLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASL-------LPV--LALNIRPYDTVLDIHA-LKLVK 224 (355)
Q Consensus 155 S~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~-------~Rl--l~~~l~r~~~~~g~~~-v~~~~ 224 (355)
..+...++.+.+|++|||+|||+|..++.+|... ++|+++|+++ ..+ +++|++ . .+..+ +++++
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~--~--~~~~~ri~~~~ 145 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASLG--LTVTAFEQHPAVACLLSDGIRRALLNPE--T--QDTAARINLHF 145 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHTT--CCEEEEECCHHHHHHHHHHHHHHHHSHH--H--HHHHTTEEEEE
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHhC--CEEEEEECChhhhHHHHHHHHHHHhHHH--h--hCCccCeEEEE
Confidence 3455555677788999999999999999999864 7999999999 777 666665 2 23433 78887
Q ss_pred ecce
Q psy7769 225 VGGS 228 (355)
Q Consensus 225 ~Da~ 228 (355)
+|+.
T Consensus 146 ~d~~ 149 (258)
T 2r6z_A 146 GNAA 149 (258)
T ss_dssp SCHH
T ss_pred CCHH
Confidence 7764
No 269
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.63 E-value=7.9e-05 Score=70.13 Aligned_cols=104 Identities=9% Similarity=-0.044 Sum_probs=63.2
Q ss_pred CCCeEeeecccCcc----hHHHHHHhcC----CCcEEEEcCCchhh--HHhhcccc------------ccc-------cC
Q psy7769 166 PYDTVLDMCAAPGG----KTLVALQTLY----PDYYCMDGASLLPV--LALNIRPY------------DTV-------LD 216 (355)
Q Consensus 166 pG~~VLD~CAgPGg----KT~~la~~~~----~g~V~AvD~s~~Rl--l~~~l~r~------------~~~-------~g 216 (355)
++.+|||+|||+|- .+..+++..+ ..+|+|+|+|+.++ +++++... +|. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45699999999998 4445555533 24899999999999 66654200 000 00
Q ss_pred ---c-----ceEEEEEecceeeecccCCCC---CccCCc-cc-cchHHHHhhhhHH-HHHHHHHhhccCCcEEEEE
Q psy7769 217 ---I-----HALKLVKVGGSVVYSTCSLSP---IQNDGV-VH-MSLKRIWEETGCE-IEIKHALKLVKVGGSVVYS 278 (355)
Q Consensus 217 ---~-----~~v~~~~~Da~~lDaPCSgsG---~t~~~~-l~-~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYs 278 (355)
+ .+|.|...|... .|....| +...++ +. +.+. .| +++....+.|+|||.|+..
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~--~~~~~~~~fDlI~crnvliyf~~~-------~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLE--KQYNVPGPFDAIFCRNVMIYFDKT-------TQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTC--SSCCCCCCEEEEEECSSGGGSCHH-------HHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCC--CCCCcCCCeeEEEECCchHhCCHH-------HHHHHHHHHHHHhCCCcEEEEE
Confidence 0 257788887643 2221111 011122 22 3322 23 8999999999999999873
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.63 E-value=0.00017 Score=76.42 Aligned_cols=115 Identities=9% Similarity=-0.041 Sum_probs=75.3
Q ss_pred HhhCCCCCCeEeeecccCcchHHHHHHhcC------------------------------------------CCcEEEEc
Q psy7769 160 LALNIRPYDTVLDMCAAPGGKTLVALQTLY------------------------------------------PDYYCMDG 197 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgKT~~la~~~~------------------------------------------~g~V~AvD 197 (355)
.+.+..++..|||.|||+|+..+.+|.+.. ...|+++|
T Consensus 184 ~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~D 263 (703)
T 3v97_A 184 MRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSD 263 (703)
T ss_dssp HHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred HhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEE
Confidence 444678899999999999999988886531 25799999
Q ss_pred CCchhh--HHhhccccccccCcc-eEEEEEecceeeecccC--CCCC-ccCCc--cccchHHHHhhhhHHHHHHHHHhhc
Q psy7769 198 ASLLPV--LALNIRPYDTVLDIH-ALKLVKVGGSVVYSTCS--LSPI-QNDGV--VHMSLKRIWEETGCEIEIKHALKLV 269 (355)
Q Consensus 198 ~s~~Rl--l~~~l~r~~~~~g~~-~v~~~~~Da~~lDaPCS--gsG~-t~~~~--l~~~~~~l~~l~~lQ~lL~~A~~~L 269 (355)
+++.++ ++.|+. . .|.. .+.+.+.|+..+..|.. ..|+ ...++ .++. ....+..+.+.+...++.+
T Consensus 264 id~~av~~A~~N~~--~--agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg--~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 264 SDARVIQRARTNAR--L--AGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLD--SEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp SCHHHHHHHHHHHH--H--TTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC-----CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH--H--cCCCCceEEEECChhhCccccccCCCCEEEeCCCcccccc--chhHHHHHHHHHHHHHHhh
Confidence 999999 888988 3 4554 48899999876655531 1221 11111 1111 1112222334566777777
Q ss_pred cCCcEEEEEeC
Q psy7769 270 KVGGSVVYSTC 280 (355)
Q Consensus 270 kpGG~lVYsTC 280 (355)
.|||+++.-|-
T Consensus 338 ~~g~~~~ilt~ 348 (703)
T 3v97_A 338 FGGWNLSLFSA 348 (703)
T ss_dssp CTTCEEEEEES
T ss_pred CCCCeEEEEeC
Confidence 79998887653
No 271
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.62 E-value=5.1e-05 Score=71.70 Aligned_cols=39 Identities=15% Similarity=0.127 Sum_probs=32.3
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchh
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLP 202 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~R 202 (355)
++++.+|||+||||||++..++...+...|+++|+....
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~ 126 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQG 126 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCc
Confidence 578999999999999999888865544678999998653
No 272
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.59 E-value=2e-05 Score=81.16 Aligned_cols=145 Identities=14% Similarity=0.062 Sum_probs=87.2
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC---------------CCcEEEEcCCchhh--HHhhccc
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY---------------PDYYCMDGASLLPV--LALNIRP 210 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~---------------~g~V~AvD~s~~Rl--l~~~l~r 210 (355)
||--..-+.+.+.++.+++| +|||.|||+|+..+.++..+. ...++++|+++..+ ++.|+.
T Consensus 227 fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~- 304 (544)
T 3khk_A 227 YYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMV- 304 (544)
T ss_dssp TCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHH-
T ss_pred EeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHH-
Confidence 55555556777788888888 999999999999887765321 35799999999988 555553
Q ss_pred cccccCc-ceEEEEE-------------ecceeeecccCCCCCccCC--c-cccchHH-------HHhhhhHH-HHHHHH
Q psy7769 211 YDTVLDI-HALKLVK-------------VGGSVVYSTCSLSPIQNDG--V-VHMSLKR-------IWEETGCE-IEIKHA 265 (355)
Q Consensus 211 ~~~~~g~-~~v~~~~-------------~Da~~lDaPCSgsG~t~~~--~-l~~~~~~-------l~~l~~lQ-~lL~~A 265 (355)
. .|. .++.+.+ +|.....||-+........ . .+|.... +......+ ..+.++
T Consensus 305 -l--~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~ 381 (544)
T 3khk_A 305 -I--RGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHM 381 (544)
T ss_dssp -H--TTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHH
T ss_pred -H--hCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHH
Confidence 1 122 1121122 3444577887543211000 0 1121000 11111223 579999
Q ss_pred HhhccCCcEEEEEeCC--CCCC-CCHHHHHHHHHh
Q psy7769 266 LKLVKVGGSVVYSTCS--LSPI-QNDGVVHMSLKR 297 (355)
Q Consensus 266 ~~~LkpGG~lVYsTCS--l~~~-ENE~vV~~~L~~ 297 (355)
++.|+|||++++.+-. ++.. -.+..+++.|-+
T Consensus 382 l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle 416 (544)
T 3khk_A 382 LYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVE 416 (544)
T ss_dssp HHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHH
T ss_pred HHHhccCceEEEEecchhhhcCcchHHHHHHHHHh
Confidence 9999999998887642 3332 256677777654
No 273
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.58 E-value=0.00012 Score=71.77 Aligned_cols=57 Identities=16% Similarity=0.141 Sum_probs=42.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhhHHhhccccccccCcceEEEEEecceeee
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPVLALNIRPYDTVLDIHALKLVKVGGSVVY 231 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rll~~~l~r~~~~~g~~~v~~~~~Da~~lD 231 (355)
+++|++|||+||+|||+|..+++.. ++|+|+|..+ +...+. ..++|+++..|+...+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg--~~V~aVD~~~---l~~~l~------~~~~V~~~~~d~~~~~ 265 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRN--MWVYSVDNGP---MAQSLM------DTGQVTWLREDGFKFR 265 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTT--CEEEEECSSC---CCHHHH------TTTCEEEECSCTTTCC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCC--CEEEEEEhhh---cChhhc------cCCCeEEEeCcccccc
Confidence 6799999999999999999998875 8999999764 112221 2246788888876533
No 274
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.52 E-value=6.8e-05 Score=70.04 Aligned_cols=35 Identities=20% Similarity=0.298 Sum_probs=29.3
Q ss_pred CCCCCeEeeecccCcchHHHHHHh--cC--CCcEEEEcC
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQT--LY--PDYYCMDGA 198 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~--~~--~g~V~AvD~ 198 (355)
++||++|||+||||||++..+++. .. .|.|+|+|.
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~ 109 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG 109 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc
Confidence 689999999999999999998887 42 367788884
No 275
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.49 E-value=0.00017 Score=69.17 Aligned_cols=104 Identities=13% Similarity=0.044 Sum_probs=69.1
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhhHHhhccccccccCcceEEEEEecceeeecccCCCCCccC
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPVLALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQND 242 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rll~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~ 242 (355)
+..++.+|||+|||+|..+..+++..+..+++++|+ +..+ +..+ . ..++.+..+|... +.|- .-+..-
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~--~~a~--~----~~~v~~~~~d~~~-~~p~--~D~v~~ 252 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVV--ENLS--G----SNNLTYVGGDMFT-SIPN--ADAVLL 252 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHH--TTCC--C----BTTEEEEECCTTT-CCCC--CSEEEE
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHH--hhcc--c----CCCcEEEeccccC-CCCC--ccEEEe
Confidence 345778999999999999999998876678999999 7766 1122 1 1247888888743 2220 100001
Q ss_pred Cc-cc-cchHHHHhhhhHHHHHHHHHhhccC---CcEEEEEeCCCCC
Q psy7769 243 GV-VH-MSLKRIWEETGCEIEIKHALKLVKV---GGSVVYSTCSLSP 284 (355)
Q Consensus 243 ~~-l~-~~~~~l~~l~~lQ~lL~~A~~~Lkp---GG~lVYsTCSl~~ 284 (355)
.. ++ |.... ..++|+++.+.||| ||+|+.+......
T Consensus 253 ~~~lh~~~d~~------~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~ 293 (352)
T 1fp2_A 253 KYILHNWTDKD------CLRILKKCKEAVTNDGKRGKVTIIDMVIDK 293 (352)
T ss_dssp ESCGGGSCHHH------HHHHHHHHHHHHSGGGCCCEEEEEECEECT
T ss_pred ehhhccCCHHH------HHHHHHHHHHhCCCCCCCcEEEEEEeecCC
Confidence 11 22 43221 11789999999999 9999998776543
No 276
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.49 E-value=0.00014 Score=68.94 Aligned_cols=49 Identities=14% Similarity=0.036 Sum_probs=43.1
Q ss_pred HHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcc
Q psy7769 158 PVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 158 ~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
++..|++++|+.+||+++|.||.|..|++. .|+|+|+|.++..+ +++ +.
T Consensus 14 ~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~ 64 (285)
T 1wg8_A 14 ALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LH 64 (285)
T ss_dssp HHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TC
T ss_pred HHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hc
Confidence 456778999999999999999999999987 58999999999999 555 54
No 277
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.40 E-value=9.9e-05 Score=68.97 Aligned_cols=73 Identities=15% Similarity=0.052 Sum_probs=53.5
Q ss_pred cHHHHHhhCCCCC--CeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccc---cccC-c-ceEEEEEe
Q psy7769 155 SLLPVLALNIRPY--DTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYD---TVLD-I-HALKLVKV 225 (355)
Q Consensus 155 S~l~~~~L~~~pG--~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~---~~~g-~-~~v~~~~~ 225 (355)
......++.+++| ++|||++||.|.-++.+|... ++|+++|+++..+ +++++++++ ...+ . .+++++++
T Consensus 75 ~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~ 152 (258)
T 2oyr_A 75 GEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVG--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHA 152 (258)
T ss_dssp GSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHT--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEES
T ss_pred HHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEEC
Confidence 4455667777788 999999999999999999874 6899999999876 555554221 0012 3 46888887
Q ss_pred ccee
Q psy7769 226 GGSV 229 (355)
Q Consensus 226 Da~~ 229 (355)
|+..
T Consensus 153 D~~~ 156 (258)
T 2oyr_A 153 SSLT 156 (258)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 7643
No 278
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.30 E-value=0.0011 Score=70.97 Aligned_cols=132 Identities=14% Similarity=0.068 Sum_probs=75.5
Q ss_pred CCCCeEeeecccCcchHHHHHHhcC---CCcEEEEcCCchhh--H--HhhccccccccCcceEEEEEe------------
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLY---PDYYCMDGASLLPV--L--ALNIRPYDTVLDIHALKLVKV------------ 225 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~---~g~V~AvD~s~~Rl--l--~~~l~r~~~~~g~~~v~~~~~------------ 225 (355)
.++.+|||.|||+|+..+.++..+. +..++|+|+++..+ + +.|+.......+.....+...
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 4689999999999999999988653 36899999999988 4 444431001122222223222
Q ss_pred -cceeeecccCCCCCccCCccccchHHHH-----------hhhhHH-HHHHHHHhhccCCcEEEEEeCC-CCCCC--CHH
Q psy7769 226 -GGSVVYSTCSLSPIQNDGVVHMSLKRIW-----------EETGCE-IEIKHALKLVKVGGSVVYSTCS-LSPIQ--NDG 289 (355)
Q Consensus 226 -Da~~lDaPCSgsG~t~~~~l~~~~~~l~-----------~l~~lQ-~lL~~A~~~LkpGG~lVYsTCS-l~~~E--NE~ 289 (355)
|....+||-++.. .......-...++. ....+. ..+.+++++|++||++++.+-. +.... ...
T Consensus 400 FDVVIgNPPYg~~~-~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~k 478 (878)
T 3s1s_A 400 VSVVVMNPPYVSGV-TDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESK 478 (878)
T ss_dssp EEEEEECCBCCSSC-CCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHH
T ss_pred CCEEEECCCccccc-cchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHH
Confidence 2233666763321 00000000000011 011344 7899999999999999987654 32222 255
Q ss_pred HHHHHHHh
Q psy7769 290 VVHMSLKR 297 (355)
Q Consensus 290 vV~~~L~~ 297 (355)
-++++|-+
T Consensus 479 kLRk~LLe 486 (878)
T 3s1s_A 479 AFREFLVG 486 (878)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 66666643
No 279
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.23 E-value=0.00073 Score=64.95 Aligned_cols=102 Identities=14% Similarity=0.052 Sum_probs=67.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhhHHhhccccccccCcceEEEEEecceeeecccCCCCCccCC
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPVLALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQNDG 243 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rll~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~~ 243 (355)
..++.+|||+|||+|..+..+++..+..+++++|+ +..+ ...+ . ..++.+..+|... +.| + .-+..-.
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~--~~a~--~----~~~v~~~~~d~~~-~~~-~-~D~v~~~ 258 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVV--GNLT--G----NENLNFVGGDMFK-SIP-S-ADAVLLK 258 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHH--SSCC--C----CSSEEEEECCTTT-CCC-C-CSEEEEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHH--hhcc--c----CCCcEEEeCccCC-CCC-C-ceEEEEc
Confidence 34678999999999999999999876678999998 5554 1122 1 1347888888754 323 1 1100111
Q ss_pred c-cc-cchHHHHhhhhHHHHHHHHHhhccC---CcEEEEEeCCCC
Q psy7769 244 V-VH-MSLKRIWEETGCEIEIKHALKLVKV---GGSVVYSTCSLS 283 (355)
Q Consensus 244 ~-l~-~~~~~l~~l~~lQ~lL~~A~~~Lkp---GG~lVYsTCSl~ 283 (355)
+ ++ |.... ..++|+++.+.||| ||+|+.....+.
T Consensus 259 ~vlh~~~d~~------~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 259 WVLHDWNDEQ------SLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp SCGGGSCHHH------HHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred ccccCCCHHH------HHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 1 22 33221 11789999999999 999998877654
No 280
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.14 E-value=0.00011 Score=62.87 Aligned_cols=83 Identities=10% Similarity=-0.076 Sum_probs=53.8
Q ss_pred hhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceee--------
Q psy7769 161 ALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVV-------- 230 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~l-------- 230 (355)
-+++++|++|||+++|. +++|+++.++ ++++.. . ++.+...|...+
T Consensus 7 ~~g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~--~------~~~~~~~d~~~~~~~~~~~~ 62 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG--N------EGRVSVENIKQLLQSAHKES 62 (176)
T ss_dssp TTTCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT--T------TSEEEEEEGGGGGGGCCCSS
T ss_pred ccCCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc--c------CcEEEEechhcCccccCCCC
Confidence 34678999999999875 2389999988 665554 1 246666666432
Q ss_pred --ecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEe
Q psy7769 231 --YSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 231 --DaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsT 279 (355)
|.-.+... ++|-. ...+++|+++.+.|||||+++.+.
T Consensus 63 ~fD~V~~~~~------l~~~~------~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 63 SFDIILSGLV------PGSTT------LHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp CEEEEEECCS------TTCCC------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEeEEEECCh------hhhcc------cCHHHHHHHHHHHCCCCEEEEEEc
Confidence 22221111 12210 122378999999999999999864
No 281
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.14 E-value=0.0012 Score=61.52 Aligned_cols=130 Identities=14% Similarity=0.029 Sum_probs=73.3
Q ss_pred CCCCCeEeeecccCcchHHHHHHhc------CC------CcEEEEcCCc---hhh-------------HHhhcccc----
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTL------YP------DYYCMDGASL---LPV-------------LALNIRPY---- 211 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~------~~------g~V~AvD~s~---~Rl-------------l~~~l~r~---- 211 (355)
.+++.+|||+|.|.|.-++.+++.. ++ .+++++|..+ .++ ++.+++..
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 4566799999999999998877643 22 4799999987 222 22232210
Q ss_pred ------ccccCcceEEEEEecceeeecccCCCCCccCCc---cc-cchHHHHhhhhH-H-HHHHHHHhhccCCcEEEEEe
Q psy7769 212 ------DTVLDIHALKLVKVGGSVVYSTCSLSPIQNDGV---VH-MSLKRIWEETGC-E-IEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 212 ------~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~~~---l~-~~~~~l~~l~~l-Q-~lL~~A~~~LkpGG~lVYsT 279 (355)
.+..+..++++..+|+..+-+-..+.+ ...-+ +. |.+.+. ..+ + ++|..+.++|+|||+|+.-|
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~-~~~~D~iflD~fsp~~~---p~lw~~~~l~~l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSL-NQKVDAWFLDGFAPAKN---PDMWTQNLFNAMARLARPGGTLATFT 213 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGG-TTCEEEEEECSSCTTTC---GGGCCHHHHHHHHHHEEEEEEEEESC
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhccccc-CCeEEEEEECCCCcccC---hhhcCHHHHHHHHHHcCCCcEEEEEe
Confidence 000122456778888754211110000 00011 11 333221 122 1 78999999999999998433
Q ss_pred CCCCCCCCHHHHHHHHHhhhhccCceEEE
Q psy7769 280 CSLSPIQNDGVVHMSLKRIWEETGCEIEI 308 (355)
Q Consensus 280 CSl~~~ENE~vV~~~L~~~~~~~~~~~~~ 308 (355)
++ .+|.+.|.. .|+.++.
T Consensus 214 aa-------~~vrr~L~~----aGF~v~~ 231 (257)
T 2qy6_A 214 SA-------GFVRRGLQE----AGFTMQK 231 (257)
T ss_dssp CB-------HHHHHHHHH----HTEEEEE
T ss_pred CC-------HHHHHHHHH----CCCEEEe
Confidence 32 478888875 3655543
No 282
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.14 E-value=0.00067 Score=63.09 Aligned_cols=104 Identities=12% Similarity=-0.113 Sum_probs=63.1
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQND 242 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~ 242 (355)
.+..+|||++||.|-.+..++ ...+++|+|+++.++ +++++. . .+ .+..+...|.....+|- ..+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~--~--~g-~~~~~~v~D~~~~~~~~-----~~D 170 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAR--E--KD-WDFTFALQDVLCAPPAE-----AGD 170 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHH--H--TT-CEEEEEECCTTTSCCCC-----BCS
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHH--h--cC-CCceEEEeecccCCCCC-----Ccc
Confidence 457799999999998887665 568999999999999 888876 2 23 45677777765433332 111
Q ss_pred CccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEE-eCCCC
Q psy7769 243 GVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYS-TCSLS 283 (355)
Q Consensus 243 ~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYs-TCSl~ 283 (355)
--+.+. -+..+...+ ..+.+.+..|+++|.+|-. |-|+.
T Consensus 171 vvLllk--~lh~LE~q~~~~~~~ll~aL~~~~vvVsfPtksl~ 211 (253)
T 3frh_A 171 LALIFK--LLPLLEREQAGSAMALLQSLNTPRMAVSFPTRSLG 211 (253)
T ss_dssp EEEEES--CHHHHHHHSTTHHHHHHHHCBCSEEEEEEECC---
T ss_pred hHHHHH--HHHHhhhhchhhHHHHHHHhcCCCEEEEcChHHhc
Confidence 111111 112222223 3333788899998666633 55664
No 283
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.04 E-value=0.001 Score=61.51 Aligned_cols=125 Identities=11% Similarity=-0.034 Sum_probs=71.2
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh-HHhhccccccccCcceEEEEEe-ccee-----eecccC
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV-LALNIRPYDTVLDIHALKLVKV-GGSV-----VYSTCS 235 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl-l~~~l~r~~~~~g~~~v~~~~~-Da~~-----lDaPCS 235 (355)
.++||+.|||++|||||++..++...+..+|+|+|+-..-. --..++ . .|.+.|++... |... +|.--|
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~--s--~gwn~v~fk~gvDv~~~~~~~~Dtllc 150 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMS--T--YGWNIVKLMSGKDVFYLPPEKCDTLLC 150 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCC--C--TTTTSEEEECSCCGGGCCCCCCSEEEE
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhh--h--cCcCceEEEeccceeecCCccccEEEE
Confidence 46799999999999999998888765556899999986544 112233 2 35566788776 7321 333222
Q ss_pred CCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccC
Q psy7769 236 LSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETG 303 (355)
Q Consensus 236 gsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~ 303 (355)
-.|- ..+. +. +.+ ..--+.|+-|-++|++ |.++. =+..-+.++|+ .+|++....++
T Consensus 151 DIge-Ss~~----~~-vE~-~RtlrvLela~~wL~~-~~fc~---KVl~py~p~v~-e~l~~lq~~fg 206 (267)
T 3p8z_A 151 DIGE-SSPS----PT-VEE-SRTIRVLKMVEPWLKN-NQFCI---KVLNPYMPTVI-EHLERLQRKHG 206 (267)
T ss_dssp CCCC-CCSC----HH-HHH-HHHHHHHHHHGGGCSS-CEEEE---EESCCCSHHHH-HHHHHHHHHHC
T ss_pred ecCC-CCCC----hh-hhh-hHHHHHHHHHHHhccc-CCEEE---EEccCCChhHH-HHHHHHHHHhC
Confidence 2231 1110 11 111 0000578888899998 54443 33333455555 44544332344
No 284
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.98 E-value=0.0005 Score=64.69 Aligned_cols=106 Identities=13% Similarity=-0.009 Sum_probs=65.5
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecceeeecccCCCCCccC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQND 242 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~~ 242 (355)
.+-.+|||++||.|-.++.++...+..+++|+|+++.++ ++.|+. . .|.. ..+...|- +|...+ ..
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~--~--~g~~-~~~~v~D~-----~~~~p~--~~ 198 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALT--R--LNVP-HRTNVADL-----LEDRLD--EP 198 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHH--H--TTCC-EEEEECCT-----TTSCCC--SC
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHH--h--cCCC-ceEEEeee-----cccCCC--CC
Confidence 335699999999999998887766668999999999999 888887 3 3443 45555554 332211 11
Q ss_pred CccccchHHHHhhhhHH--HHHHHHHhhccCCcEEEEE-eCCCC
Q psy7769 243 GVVHMSLKRIWEETGCE--IEIKHALKLVKVGGSVVYS-TCSLS 283 (355)
Q Consensus 243 ~~l~~~~~~l~~l~~lQ--~lL~~A~~~LkpGG~lVYs-TCSl~ 283 (355)
.++.....-+..+...| .++ ..+..|++||.+|-- |-|+.
T Consensus 199 ~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~ 241 (281)
T 3lcv_B 199 ADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLG 241 (281)
T ss_dssp CSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC---
T ss_pred cchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhc
Confidence 22111111122222222 455 899999998877733 55553
No 285
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.89 E-value=0.0016 Score=66.66 Aligned_cols=141 Identities=13% Similarity=0.114 Sum_probs=83.2
Q ss_pred EEEechhcHHHHHhhCCCCCCeEeeecccCcchHHHHHHhcC-------------CCcEEEEcCCchhh--HHhhccccc
Q psy7769 148 YYCMDGASLLPVLALNIRPYDTVLDMCAAPGGKTLVALQTLY-------------PDYYCMDGASLLPV--LALNIRPYD 212 (355)
Q Consensus 148 ~~~QD~aS~l~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~-------------~g~V~AvD~s~~Rl--l~~~l~r~~ 212 (355)
||-=..-+.+.+.+++|++|++|+|-|||+||..+.+...+. ...++++|+++... ++-|+- -
T Consensus 199 fyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~--l 276 (530)
T 3ufb_A 199 FYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL--L 276 (530)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH--H
T ss_pred ECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH--h
Confidence 554445566778889999999999999999999887765321 24699999999887 444443 1
Q ss_pred cccCcceEEEEE----------------ecceeeecccCCCCCccCCc-c-ccchHHHHhhhhHH-HHHHHHHhhcc---
Q psy7769 213 TVLDIHALKLVK----------------VGGSVVYSTCSLSPIQNDGV-V-HMSLKRIWEETGCE-IEIKHALKLVK--- 270 (355)
Q Consensus 213 ~~~g~~~v~~~~----------------~Da~~lDaPCSgsG~t~~~~-l-~~~~~~l~~l~~lQ-~lL~~A~~~Lk--- 270 (355)
.|.....+.. +|...-.||.++.. ... . ++.. .......+ -.+.++++.||
T Consensus 277 --hg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~---~~~~~~~~~~--~~~~~~~~~~Fl~~~l~~Lk~~~ 349 (530)
T 3ufb_A 277 --HGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEE---EKGILGNFPE--DMQTAETAMLFLQLIMRKLKRPG 349 (530)
T ss_dssp --HTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBC---CHHHHTTSCG--GGCCCBHHHHHHHHHHHHBCCTT
T ss_pred --cCCccccccccccccCchhhhcccccceEEEecCCCCccc---cccccccCch--hcccchhHHHHHHHHHHHhhhhh
Confidence 2322112222 34444677774321 111 0 0100 00112223 44667777776
Q ss_pred ----CCcEEEEEeC--CCCCCCCHHHHHHHHHh
Q psy7769 271 ----VGGSVVYSTC--SLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 271 ----pGG~lVYsTC--Sl~~~ENE~vV~~~L~~ 297 (355)
+||++++.+- .++..-.+.-+++.|-+
T Consensus 350 ~~l~~gGr~avVlP~g~Lf~~~~~~~iRk~Lle 382 (530)
T 3ufb_A 350 HGSDNGGRAAVVVPNGTLFSDGISARIKEELLK 382 (530)
T ss_dssp SSSSSCCEEEEEEEHHHHHCCTHHHHHHHHHHH
T ss_pred hccCCCceEEEEecchhhhccchHHHHHHHHhh
Confidence 7999988765 34433335567666654
No 286
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.70 E-value=0.0017 Score=61.72 Aligned_cols=39 Identities=13% Similarity=0.002 Sum_probs=33.0
Q ss_pred CCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCch
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLL 201 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~ 201 (355)
.+++|+.|||++|||||++..++...+..+|+|+|+-..
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~ 129 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGP 129 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCST
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCC
Confidence 467899999999999999987776654468999999876
No 287
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=96.69 E-value=0.0056 Score=55.09 Aligned_cols=118 Identities=11% Similarity=-0.080 Sum_probs=73.7
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccC---cceEEEEEecceeee---cccCC
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLD---IHALKLVKVGGSVVY---STCSL 236 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g---~~~v~~~~~Da~~lD---aPCSg 236 (355)
+...+||++++ |+-|+.+|++. .|+|+++|.++.+. ++++++ + .| ..+|.++.+|+.... .|-+.
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~--~--~g~~~~~~I~~~~gda~~~~~wg~p~~~ 101 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAELP-GKHVTSVESDRAWARMMKAWLA--A--NPPAEGTEVNIVWTDIGPTGDWGHPVSD 101 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTST-TCEEEEEESCHHHHHHHHHHHH--H--SCCCTTCEEEEEECCCSSBCGGGCBSSS
T ss_pred hCCCEEEEECc--hHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHH--H--cCCCCCCceEEEEeCchhhhcccccccc
Confidence 45679999997 67777777743 59999999999999 888898 3 34 467899988864321 11111
Q ss_pred CCC---------------ccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHH
Q psy7769 237 SPI---------------QNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLK 296 (355)
Q Consensus 237 sG~---------------t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~ 296 (355)
++. ...-++.+-..+ ..+.-+..++++|+|||+||.=..+.. .....|..|++
T Consensus 102 ~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~DNv~~r--~~y~~v~~~~~ 169 (202)
T 3cvo_A 102 AKWRSYPDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFDDYSQR--RWQHQVEEFLG 169 (202)
T ss_dssp TTGGGTTHHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEETTGGGC--SSGGGGHHHHC
T ss_pred hhhhhHHHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEeCCcCC--cchHHHHHHHh
Confidence 100 000111110000 011446668899999999987554433 44567788876
No 288
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.55 E-value=0.0014 Score=68.65 Aligned_cols=116 Identities=11% Similarity=-0.055 Sum_probs=73.1
Q ss_pred CCeEeeecccCcchH---HHHHHhcCC-CcEEEEcCCchhh-HHhhccccccccCcceEEEEEecceeeecccCCCCCcc
Q psy7769 167 YDTVLDMCAAPGGKT---LVALQTLYP-DYYCMDGASLLPV-LALNIRPYDTVLDIHALKLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 167 G~~VLD~CAgPGgKT---~~la~~~~~-g~V~AvD~s~~Rl-l~~~l~r~~~~~g~~~v~~~~~Da~~lDaPCSgsG~t~ 241 (355)
+..|||+|||.|-.. +.+++.... .+|+|+|.++... +++..+ ...++ +.|+++++|.+.++.|.-
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~--~N~~~-dkVtVI~gd~eev~LPEK------ 428 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQ--FEEWG-SQVTVVSSDMREWVAPEK------ 428 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHH--HHTTG-GGEEEEESCTTTCCCSSC------
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHH--hccCC-CeEEEEeCcceeccCCcc------
Confidence 347999999999884 444444322 3799999998766 555555 21122 569999999988777641
Q ss_pred CCccc---cc-hHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCC--CCCCHHHHHHH
Q psy7769 242 DGVVH---MS-LKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLS--PIQNDGVVHMS 294 (355)
Q Consensus 242 ~~~l~---~~-~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~--~~ENE~vV~~~ 294 (355)
-++. |- ---+.+.. + ++|.++-++|||||.++=+.|+++ |.+.+..-+..
T Consensus 429 -VDIIVSEwMG~fLl~E~m-l-evL~Ardr~LKPgGimiPs~atlyiapi~~~~l~~e~ 484 (637)
T 4gqb_A 429 -ADIIVSELLGSFADNELS-P-ECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYNEV 484 (637)
T ss_dssp -EEEEECCCCBTTBGGGCH-H-HHHHHHGGGEEEEEEEESCEEEEEEEEEECHHHHHHH
T ss_pred -cCEEEEEcCcccccccCC-H-HHHHHHHHhcCCCcEEccccceEEEEEecCHHHHHHH
Confidence 1111 11 00112211 1 678899999999999995555543 56766654443
No 289
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.33 E-value=0.0042 Score=63.85 Aligned_cols=59 Identities=12% Similarity=-0.181 Sum_probs=46.7
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV 229 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~ 229 (355)
..+-+|||+|||.|..+..||+.+ +.|+++|.++..+ ++.... . .+..++.+.+.|+..
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~g--a~V~giD~~~~~i~~a~~~a~--~--~~~~~~~~~~~~~~~ 125 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKG--ATIVGIDFQQENINVCRALAE--E--NPDFAAEFRVGRIEE 125 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHH--T--STTSEEEEEECCHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHhCC--CEEEEECCCHHHHHHHHHHHH--h--cCCCceEEEECCHHH
Confidence 345799999999999999999986 7899999999999 555554 2 243468888877643
No 290
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.86 E-value=0.0077 Score=56.62 Aligned_cols=43 Identities=16% Similarity=-0.127 Sum_probs=37.3
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcc
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
.+|+.|||.+||+|..+..++.++ .+++++|+++..+ ++++++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHH
Confidence 689999999999999877776654 6899999999999 777776
No 291
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.79 E-value=0.011 Score=56.43 Aligned_cols=44 Identities=23% Similarity=0.098 Sum_probs=32.2
Q ss_pred cHHHHHh----hCCCCCCeEeeecc------cCcchHHHHHHhcCC-CcEEEEcCCc
Q psy7769 155 SLLPVLA----LNIRPYDTVLDMCA------APGGKTLVALQTLYP-DYYCMDGASL 200 (355)
Q Consensus 155 S~l~~~~----L~~~pG~~VLD~CA------gPGgKT~~la~~~~~-g~V~AvD~s~ 200 (355)
.||.-++ |.+.-|++|||++| |||+ ..+.+.++. +.|+++|+.+
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~ 148 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLND 148 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSC
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcc
Confidence 4555444 23557999999997 9999 345556655 5999999987
No 292
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.64 E-value=0.01 Score=57.72 Aligned_cols=77 Identities=14% Similarity=0.070 Sum_probs=57.6
Q ss_pred EEEechhc-HHHHHhhCCC------CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcc
Q psy7769 148 YYCMDGAS-LLPVLALNIR------PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIH 218 (355)
Q Consensus 148 ~~~QD~aS-~l~~~~L~~~------pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~ 218 (355)
-|+.|+.- .-++..++++ +++.||+++.|+|..|..|++.....+|+|+|+++..+ |++.+. .+
T Consensus 33 nFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~-------~~ 105 (353)
T 1i4w_A 33 KYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE-------GS 105 (353)
T ss_dssp CCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTT-------TS
T ss_pred CccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhcc-------CC
Confidence 35566553 3445566665 46999999999999999999875557899999999876 665542 14
Q ss_pred eEEEEEecceeee
Q psy7769 219 ALKLVKVGGSVVY 231 (355)
Q Consensus 219 ~v~~~~~Da~~lD 231 (355)
+++++.+|+..+|
T Consensus 106 ~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 106 PLQILKRDPYDWS 118 (353)
T ss_dssp SCEEECSCTTCHH
T ss_pred CEEEEECCccchh
Confidence 6899999996655
No 293
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=95.37 E-value=0.0043 Score=65.43 Aligned_cols=120 Identities=5% Similarity=-0.080 Sum_probs=72.8
Q ss_pred CeEeeecccCcchHHHH---HH-hc---------CCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecceeee
Q psy7769 168 DTVLDMCAAPGGKTLVA---LQ-TL---------YPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGSVVY 231 (355)
Q Consensus 168 ~~VLD~CAgPGgKT~~l---a~-~~---------~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~~lD 231 (355)
-.|||+|||.|-.+..+ ++ .. ...+|+|+|.++... ++.+.. .+. ..|+++.+|.+.+.
T Consensus 411 ~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-----Ng~~d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 411 VVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-----RTWKRRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-----HTTTTCSEEEESCGGGHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-----cCCCCeEEEEeCchhhcc
Confidence 47999999999997432 22 11 124999999998766 444333 122 34899999998876
Q ss_pred cccCCCCCccCCccc---cchHHHHhhhhHH-HHHHHHHhhccCCcEEEEE--eCCCCCCCCHHHHHHHH
Q psy7769 232 STCSLSPIQNDGVVH---MSLKRIWEETGCE-IEIKHALKLVKVGGSVVYS--TCSLSPIQNDGVVHMSL 295 (355)
Q Consensus 232 aPCSgsG~t~~~~l~---~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYs--TCSl~~~ENE~vV~~~L 295 (355)
.|-...| ...-++. |--. .-..++. ++|..+-++|||||.++=+ |..+.|.+.+..-+.+.
T Consensus 486 lp~~~~~-~ekVDIIVSElmGs--fl~nEL~pe~Ld~v~r~Lkp~Gi~iP~~~t~ylaPi~~~~l~~~v~ 552 (745)
T 3ua3_A 486 GIAKDRG-FEQPDIIVSELLGS--FGDNELSPECLDGVTGFLKPTTISIPQKYTSYVKPIMSTHIHQTIK 552 (745)
T ss_dssp HHHHHTT-CCCCSEEEECCCBT--TBGGGSHHHHHHTTGGGSCTTCEEESCEEEEEEEEEECHHHHHHHH
T ss_pred cccccCC-CCcccEEEEecccc--ccchhccHHHHHHHHHhCCCCcEEECCccEEEEEEecCHHHHHHHH
Confidence 6421101 0111111 2110 0011234 7899999999999999944 44455677776655443
No 294
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=95.15 E-value=0.065 Score=50.80 Aligned_cols=123 Identities=13% Similarity=-0.057 Sum_probs=76.1
Q ss_pred HHHhhCCCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcccc-ccccCcceEEEEEeccee-----
Q psy7769 158 PVLALNIRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPY-DTVLDIHALKLVKVGGSV----- 229 (355)
Q Consensus 158 ~~~~L~~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~-~~~~g~~~v~~~~~Da~~----- 229 (355)
+++++.+.| .+||=+|.|-|+.+-.++...+-.+|+.+|+++.-+ .++.+... ......++++++..||..
T Consensus 76 ~~l~~~p~p-k~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~ 154 (294)
T 3o4f_A 76 VPLLAHGHA-KHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT 154 (294)
T ss_dssp HHHHHSSCC-CEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS
T ss_pred HHHhhCCCC-CeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc
Confidence 345556665 499999999999888887654446899999999888 55444210 000233678999888864
Q ss_pred --------eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 230 --------VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 230 --------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
+|.+-. .|. . .-.++. +.++.+.+.|+|||.+|.-+-|.. -+...+...++.
T Consensus 155 ~~~yDvIi~D~~dp-~~~-~--~~L~t~----------eFy~~~~~~L~p~Gv~v~q~~sp~--~~~~~~~~~~~~ 214 (294)
T 3o4f_A 155 SQTFDVIISDCTDP-IGP-G--ESLFTS----------AFYEGCKRCLNPGGIFVAQNGVCF--LQQEEAIDSHRK 214 (294)
T ss_dssp SCCEEEEEESCCCC-CCT-T--CCSSCC----------HHHHHHHHTEEEEEEEEEEEEESS--SCCHHHHHHHHH
T ss_pred cccCCEEEEeCCCc-CCC-c--hhhcCH----------HHHHHHHHHhCCCCEEEEecCCcc--cChHHHHHHHHH
Confidence 554431 110 0 000111 678889999999999997533322 233344444443
No 295
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=95.15 E-value=0.038 Score=52.06 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=66.6
Q ss_pred CCCeEeeecccCcchHHHHHHhc-----CCCcEEEEcCCch--------------------------hh--HHhhccccc
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL-----YPDYYCMDGASLL--------------------------PV--LALNIRPYD 212 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~-----~~g~V~AvD~s~~--------------------------Rl--l~~~l~r~~ 212 (355)
|| .||+++++.|+-++.++..+ ..++|+++|.... ++ +++|++ +
T Consensus 107 pg-~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~--~ 183 (282)
T 2wk1_A 107 PG-DLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFR--N 183 (282)
T ss_dssp CC-EEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHH--H
T ss_pred CC-cEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHH--H
Confidence 55 99999999999999988765 2588999996421 33 677887 3
Q ss_pred cccCc--ceEEEEEecceeeecccCCCCCccCCc-cccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 213 TVLDI--HALKLVKVGGSVVYSTCSLSPIQNDGV-VHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 213 ~~~g~--~~v~~~~~Da~~lDaPCSgsG~t~~~~-l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
.|. .+|+++.+|+...= |. -.+ ..-. +..+.+ .. ......|+.++..|+|||.||+=...
T Consensus 184 --~gl~~~~I~li~Gda~etL-~~-~~~--~~~d~vfIDaD-~y--~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 184 --YDLLDEQVRFLPGWFKDTL-PT-API--DTLAVLRMDGD-LY--ESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp --TTCCSTTEEEEESCHHHHS-TT-CCC--CCEEEEEECCC-SH--HHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred --cCCCcCceEEEEeCHHHHH-hh-CCC--CCEEEEEEcCC-cc--ccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 343 67999999885311 11 000 0011 112221 10 01116789999999999999986653
No 296
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=95.05 E-value=0.035 Score=54.33 Aligned_cols=43 Identities=12% Similarity=-0.006 Sum_probs=31.2
Q ss_pred CCeEeeecccCcchHHHHHHh--------c-------CCCcEEEEcCCchhh--HHhhcc
Q psy7769 167 YDTVLDMCAAPGGKTLVALQT--------L-------YPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~--------~-------~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
..+|+|+|||+|.-|+.++.. . +.-.|+.+|.-.... +-+.+.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 579999999999999987421 1 235789999888776 434443
No 297
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.79 E-value=0.052 Score=51.31 Aligned_cols=46 Identities=13% Similarity=0.059 Sum_probs=34.5
Q ss_pred hCCCCCCeEeeecccCcch-HHHHHHhcCCCcEEEEcCCchhh-HHhh
Q psy7769 162 LNIRPYDTVLDMCAAPGGK-TLVALQTLYPDYYCMDGASLLPV-LALN 207 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgK-T~~la~~~~~g~V~AvD~s~~Rl-l~~~ 207 (355)
..+++|++||=.+||++|- +.++|......+|+++|.+++|+ +.+.
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh
Confidence 4688999999999887653 44455555558999999999998 4433
No 298
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.72 E-value=0.031 Score=55.07 Aligned_cols=47 Identities=15% Similarity=0.075 Sum_probs=40.9
Q ss_pred CCCCCCeEeeecccCcchHHHHH-HhcCC-CcEEEEcCCchhh--HHhhcc
Q psy7769 163 NIRPYDTVLDMCAAPGGKTLVAL-QTLYP-DYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT~~la-~~~~~-g~V~AvD~s~~Rl--l~~~l~ 209 (355)
.+++|+.|+|++|.-|..|..++ ....+ ++|+|+|.++... +++|++
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~ 273 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLR 273 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHH
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 46899999999999999999888 45544 8999999999988 888887
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.51 E-value=0.03 Score=51.53 Aligned_cols=44 Identities=20% Similarity=0.160 Sum_probs=36.3
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
..+|+.|||.+||+|..+..++.++ .+++++|+++..+ +++|++
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKLG--RNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHH
Confidence 3789999999999998666655553 6899999999988 777776
No 300
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.50 E-value=0.094 Score=49.89 Aligned_cols=44 Identities=20% Similarity=0.084 Sum_probs=32.0
Q ss_pred HhhCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 160 LALNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
...++++|++||=.+||+ |..++++|...+-.+|+++|.++.|+
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~ 204 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCC 204 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH
Confidence 344689999999997654 44445566555434899999999988
No 301
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.50 E-value=0.022 Score=54.83 Aligned_cols=73 Identities=11% Similarity=0.109 Sum_probs=44.4
Q ss_pred CeEeeecccCcchHHHHHHhcCC-CcEEEEcCCchhh--HHhhccccccc-cCcceEE---EE--EecceeeecccCCCC
Q psy7769 168 DTVLDMCAAPGGKTLVALQTLYP-DYYCMDGASLLPV--LALNIRPYDTV-LDIHALK---LV--KVGGSVVYSTCSLSP 238 (355)
Q Consensus 168 ~~VLD~CAgPGgKT~~la~~~~~-g~V~AvD~s~~Rl--l~~~l~r~~~~-~g~~~v~---~~--~~Da~~lDaPCSgsG 238 (355)
.+|||++||.||.+..+...+.. ..|+|+|+++..+ .+.|....... .++..+. +. ..|....++||.++.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS 82 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT 82 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC-----
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcchh
Confidence 47999999999999988876422 3699999999999 77777521100 1111111 11 356667999998876
Q ss_pred Cc
Q psy7769 239 IQ 240 (355)
Q Consensus 239 ~t 240 (355)
..
T Consensus 83 ~a 84 (343)
T 1g55_A 83 RI 84 (343)
T ss_dssp --
T ss_pred hc
Confidence 43
No 302
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.12 E-value=0.23 Score=47.29 Aligned_cols=43 Identities=19% Similarity=0.098 Sum_probs=32.1
Q ss_pred hhCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 161 ALNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
..++++|++||-.+||+ |..++++|...+-.+|+++|.++.++
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~ 209 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRL 209 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 34789999999998754 44455666655434899999999988
No 303
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.05 E-value=0.045 Score=53.47 Aligned_cols=121 Identities=13% Similarity=0.085 Sum_probs=65.3
Q ss_pred CeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccc-cCcceEE----------EEEecceeeeccc
Q psy7769 168 DTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTV-LDIHALK----------LVKVGGSVVYSTC 234 (355)
Q Consensus 168 ~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~-~g~~~v~----------~~~~Da~~lDaPC 234 (355)
.+|||+|||.||.+..+.+.+. -.|+|+|+++..+ .+.|......+ .++..+. .-..|....++||
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPC 81 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPC 81 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCC
Confidence 5899999999999998877652 3578999999998 77776511100 1111110 0134555689999
Q ss_pred CCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHH
Q psy7769 235 SLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSL 295 (355)
Q Consensus 235 SgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L 295 (355)
.++...+.+. .. +- ...+-.-.-..++.++|--.|+=..--+....+..+.+.++
T Consensus 82 Q~fS~ag~~~--~~--d~--r~~L~~~~~~~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~ 136 (376)
T 3g7u_A 82 QGFSSIGKGN--PD--DS--RNQLYMHFYRLVSELQPLFFLAENVPGIMQEKYSGIRNKAF 136 (376)
T ss_dssp CTTC---------C--HH--HHHHHHHHHHHHHHHCCSEEEEEECTTTTCGGGHHHHHHHH
T ss_pred CCcccccCCC--CC--Cc--hHHHHHHHHHHHHHhCCCEEEEecchHhhccCcHHHHHHHH
Confidence 8776433321 11 11 11121112234445688533333444444445556666665
No 304
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=93.78 E-value=0.26 Score=48.27 Aligned_cols=107 Identities=15% Similarity=0.075 Sum_probs=64.8
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcccc-ccccC---cceEEEEEeccee----------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPY-DTVLD---IHALKLVKVGGSV---------- 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~-~~~~g---~~~v~~~~~Da~~---------- 229 (355)
+..+||=+|.|-|+....+++. +..+|+.+|+++.-+ .++.+... ....+ .++++++..||..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 4579999999999988877764 347899999999988 45544310 00011 1347787777642
Q ss_pred ------eecccCCCCCccCCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEE-EeCCC
Q psy7769 230 ------VYSTCSLSPIQNDGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVY-STCSL 282 (355)
Q Consensus 230 ------lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVY-sTCSl 282 (355)
+|++-...+ + .+..... .-+. +.++.+.+.|+|||.+|. +.|-.
T Consensus 284 ~yDvIIvDl~D~~~s-~-------~p~g~a~-~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~ 335 (381)
T 3c6k_A 284 EFDYVINDLTAVPIS-T-------SPEEDST-WEFLRLILDLSMKVLKQDGKYFTQGNCVN 335 (381)
T ss_dssp CEEEEEEECCSSCCC-C-------C----CH-HHHHHHHHHHHHHTEEEEEEEEEEEEETT
T ss_pred ceeEEEECCCCCccc-C-------cccCcch-HHHHHHHHHHHHHhcCCCCEEEEecCCCc
Confidence 665431111 0 0100000 1122 778999999999999986 34433
No 305
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.51 E-value=0.22 Score=46.92 Aligned_cols=41 Identities=10% Similarity=-0.080 Sum_probs=32.2
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
..+++|++||-.+||+ |..++++|...+ .+|+++|.++.++
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~ 203 (340)
T 3s2e_A 162 TDTRPGQWVVISGIGGLGHVAVQYARAMG-LRVAAVDIDDAKL 203 (340)
T ss_dssp TTCCTTSEEEEECCSTTHHHHHHHHHHTT-CEEEEEESCHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCCHHHH
Confidence 4678999999988765 555566666553 5999999999998
No 306
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=93.43 E-value=0.17 Score=49.69 Aligned_cols=24 Identities=4% Similarity=-0.022 Sum_probs=21.1
Q ss_pred HHHHHHHhhccCCcEEEEEeCCCC
Q psy7769 260 IEIKHALKLVKVGGSVVYSTCSLS 283 (355)
Q Consensus 260 ~lL~~A~~~LkpGG~lVYsTCSl~ 283 (355)
..|+.-.+-|+|||++|.++..-.
T Consensus 206 ~FL~~Ra~eL~pGG~mvl~~~gr~ 229 (384)
T 2efj_A 206 TFLRIHSEELISRGRMLLTFICKE 229 (384)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHhccCCeEEEEEecCC
Confidence 679999999999999999987653
No 307
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=93.17 E-value=0.07 Score=51.10 Aligned_cols=122 Identities=10% Similarity=-0.014 Sum_probs=68.0
Q ss_pred CCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceE---EEEEecceeeecccCCCCCcc
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHAL---KLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v---~~~~~Da~~lDaPCSgsG~t~ 241 (355)
+.+|+|++||.||.+..+.+.+ -..|+|+|+++..+ .+.|..... ..++..+ .+-..|....++||.++...+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~~~~~-~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~ag 88 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG-AECVYSNEWDKYAQEVYEMNFGEKP-EGDITQVNEKTIPDHDILCAGFPCQAFSISG 88 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-CEEEEEECCCHHHHHHHHHHHSCCC-BSCGGGSCGGGSCCCSEEEEECCCTTTCTTS
T ss_pred CCcEEEECCCcCHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHcCCCC-cCCHHHcCHhhCCCCCEEEECCCCCCcchhc
Confidence 5689999999999998887764 24589999999988 777765210 0111111 011346666999998876444
Q ss_pred CCc-cccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 242 DGV-VHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 242 ~~~-l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
.+. +. . ....+- +.+ .+++.++|--.++=..-.+....+....+.+++.
T Consensus 89 ~~~g~~-d-----~r~~L~~~~~-r~i~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~ 139 (327)
T 2c7p_A 89 KQKGFE-D-----SRGTLFFDIA-RIVREKKPKVVFMENVKNFASHDNGNTLEVVKNT 139 (327)
T ss_dssp CCCGGG-S-----TTSCHHHHHH-HHHHHHCCSEEEEEEEGGGGTGGGGHHHHHHHHH
T ss_pred ccCCCc-c-----hhhHHHHHHH-HHHHhccCcEEEEeCcHHHHhccccHHHHHHHHH
Confidence 332 11 0 111111 222 2334467854444444444433344444555443
No 308
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.03 E-value=0.44 Score=44.79 Aligned_cols=48 Identities=15% Similarity=-0.061 Sum_probs=33.9
Q ss_pred HhhCCCCCCeEeeecccCcch-HHHHHHhcCCCcEEEEcCCchhh-HHhh
Q psy7769 160 LALNIRPYDTVLDMCAAPGGK-TLVALQTLYPDYYCMDGASLLPV-LALN 207 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgPGgK-T~~la~~~~~g~V~AvD~s~~Rl-l~~~ 207 (355)
....+++|++||=.+||+.|. ++++|...+...++++|.+++|+ +.+.
T Consensus 154 ~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~ 203 (346)
T 4a2c_A 154 HLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS 203 (346)
T ss_dssp HHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred HHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH
Confidence 334678999999998866543 34555555445689999999998 4433
No 309
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.70 E-value=0.4 Score=45.26 Aligned_cols=41 Identities=10% Similarity=-0.018 Sum_probs=32.6
Q ss_pred CCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 163 NIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 163 ~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.+++|++||=.+||+ |..++++|...+..+|+++|.++.|+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~ 209 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRL 209 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 578999999998755 55556677665557999999999998
No 310
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.40 E-value=0.14 Score=49.26 Aligned_cols=44 Identities=11% Similarity=-0.104 Sum_probs=32.4
Q ss_pred HhhCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 160 LALNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 160 ~~L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
...++++|++||=.+||+ |..++++|...+-.+|+++|.++.++
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~ 220 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKR 220 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 345789999999988754 44445566655434899999999998
No 311
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=92.39 E-value=0.039 Score=52.08 Aligned_cols=105 Identities=11% Similarity=0.034 Sum_probs=69.5
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee--------------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV-------------- 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~-------------- 229 (355)
.+..+||+.||+|..++.++.. ..+++.+|.++..+ +++|++ . ..++++.+.|+..
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~--~----~~~~~V~~~D~~~~L~~l~~~~~~fdL 162 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPH--F----NKKVYVNHTDGVSKLNALLPPPEKRGL 162 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCC--T----TSCEEEECSCHHHHHHHHCSCTTSCEE
T ss_pred cCCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhC--c----CCcEEEEeCcHHHHHHHhcCCCCCccE
Confidence 4667999999999999887762 37899999999999 899997 2 2467888888632
Q ss_pred --eecccCCCCCccCCccccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhh
Q psy7769 230 --VYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRI 298 (355)
Q Consensus 230 --lDaPCSgsG~t~~~~l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~ 298 (355)
+|||--- ..... ..-+.|..+.+ +.|+|+++. ++|.-+...++.+++..
T Consensus 163 VfiDPPYe~------------k~~~~---~vl~~L~~~~~-r~~~Gi~v~----WYPi~~~~~~~~~~~~l 213 (283)
T 2oo3_A 163 IFIDPSYER------------KEEYK---EIPYAIKNAYS-KFSTGLYCV----WYPVVNKAWTEQFLRKM 213 (283)
T ss_dssp EEECCCCCS------------TTHHH---HHHHHHHHHHH-HCTTSEEEE----EEEESSHHHHHHHHHHH
T ss_pred EEECCCCCC------------CcHHH---HHHHHHHHhCc-cCCCeEEEE----EEeccchHHHHHHHHHH
Confidence 6666410 01111 11133444333 446788775 55666677777777665
No 312
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.34 E-value=0.39 Score=45.85 Aligned_cols=42 Identities=14% Similarity=0.098 Sum_probs=32.3
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+||+ |..++++|...+-.+|+++|.++.++
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~ 228 (371)
T 1f8f_A 186 LKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRL 228 (371)
T ss_dssp TCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH
Confidence 4688999999998765 55556666665433699999999998
No 313
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=92.21 E-value=0.79 Score=42.89 Aligned_cols=123 Identities=11% Similarity=0.026 Sum_probs=65.7
Q ss_pred CeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhccccccc-cCcceE---EEEEecceeeecccCCCCCcc
Q psy7769 168 DTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIRPYDTV-LDIHAL---KLVKVGGSVVYSTCSLSPIQN 241 (355)
Q Consensus 168 ~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~r~~~~-~g~~~v---~~~~~Da~~lDaPCSgsG~t~ 241 (355)
.+|||++||.||.+..+-+.+- -.|.|+|+++... .+.|... ..+ .++..+ .+-..|...--+||.++-+.+
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~~~-~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag 78 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNHSA-KLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGG 78 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHCCS-EEEESCGGGCCGGGSCCCSEEECCCCGGGTEETT
T ss_pred CeEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHCCC-CcccCChhhCCHhhCCcccEEEecCCCCCcCCCC
Confidence 4799999999999988766542 3578999999988 6666541 000 000000 011123333557997765332
Q ss_pred CCccccchHHHHhhhhHH-HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhh
Q psy7769 242 DGVVHMSLKRIWEETGCE-IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRI 298 (355)
Q Consensus 242 ~~~l~~~~~~l~~l~~lQ-~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~ 298 (355)
.+. ... + ....+- +++ ..++.++|--.|+=..--+....+..+.+.+++..
T Consensus 79 ~~~-g~~--d--~R~~L~~~~~-r~i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l 130 (331)
T 3ubt_Y 79 SLR-GID--D--PRGKLFYEYI-RILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEF 130 (331)
T ss_dssp EEC-CTT--C--GGGHHHHHHH-HHHHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHH
T ss_pred Ccc-CCC--C--chhHHHHHHH-HHHhccCCeEEEeeeecccccccccchhhhhhhhh
Confidence 211 010 1 111122 222 34455788655554555555555556666666544
No 314
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.19 E-value=0.51 Score=44.83 Aligned_cols=43 Identities=19% Similarity=0.076 Sum_probs=31.3
Q ss_pred hhCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 161 ALNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
..++++|++||=.+||+ |..++++|...+-..|+++|.++.++
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~ 217 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRL 217 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 34689999999987644 44445566655433599999999999
No 315
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.18 E-value=0.27 Score=46.61 Aligned_cols=41 Identities=5% Similarity=-0.202 Sum_probs=31.1
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+||+ |..++++|...+ .+|+++|.++.++
T Consensus 172 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~ 213 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKK 213 (348)
T ss_dssp TTCCTTCEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSTTH
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCHHHH
Confidence 3688999999987654 444455665543 6899999999998
No 316
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.05 E-value=0.52 Score=45.15 Aligned_cols=42 Identities=10% Similarity=-0.111 Sum_probs=31.2
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||=.+||+ |..++++|...+-.+|+++|.++.|+
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~ 231 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKY 231 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 4678999999997753 44445566555434899999999998
No 317
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=91.84 E-value=0.15 Score=49.62 Aligned_cols=107 Identities=8% Similarity=-0.037 Sum_probs=62.7
Q ss_pred CCeEeeecccCcchHHHHHHh----------------cCCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQT----------------LYPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~----------------~~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
.-+|+|+||+.|.-|+.+... .+.-.|+.+|.-.... +-+.+. ......++ .++.+.+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~--~~~~~~~~-~f~~gvpg 128 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLP--IENDVDGV-CFINGVPG 128 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTT--TSCSCTTC-EEEEEEES
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcc--hhcccCCC-EEEEecch
Confidence 358999999999999865432 1125799999998888 666655 11000112 23322221
Q ss_pred e----------eecccCCCCCccCCccccc--------------------hHHHHhhh--hHH----HHHHHHHhhccCC
Q psy7769 229 V----------VYSTCSLSPIQNDGVVHMS--------------------LKRIWEET--GCE----IEIKHALKLVKVG 272 (355)
Q Consensus 229 ~----------lDaPCSgsG~t~~~~l~~~--------------------~~~l~~l~--~lQ----~lL~~A~~~LkpG 272 (355)
. +|.-+|... ++|- +..+.+.- +.| ..|+.-.+-|+||
T Consensus 129 SFy~rlfp~~S~d~v~Ss~a------LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pG 202 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYS------LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPG 202 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESC------TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTT
T ss_pred hhhhccCCCCceEEEEehhh------hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1 444444333 2331 11121111 122 6799999999999
Q ss_pred cEEEEEeCCC
Q psy7769 273 GSVVYSTCSL 282 (355)
Q Consensus 273 G~lVYsTCSl 282 (355)
|++|.++..-
T Consensus 203 G~mvl~~~gr 212 (359)
T 1m6e_X 203 GRMVLTILGR 212 (359)
T ss_dssp CEEEEEEEEC
T ss_pred ceEEEEEecC
Confidence 9999998755
No 318
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=91.50 E-value=0.15 Score=43.78 Aligned_cols=39 Identities=8% Similarity=-0.178 Sum_probs=30.6
Q ss_pred CCCCCeEeeecccCc-chHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 164 IRPYDTVLDMCAAPG-GKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 164 ~~pG~~VLD~CAgPG-gKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
..++++|||+|||+| ..+..|+... .-.|+|+|+++..+
T Consensus 33 ~~~~~rVlEVG~G~g~~vA~~La~~~-g~~V~atDInp~Av 72 (153)
T 2k4m_A 33 SGPGTRVVEVGAGRFLYVSDYIRKHS-KVDLVLTDIKPSHG 72 (153)
T ss_dssp SCSSSEEEEETCTTCCHHHHHHHHHS-CCEEEEECSSCSST
T ss_pred CCCCCcEEEEccCCChHHHHHHHHhC-CCeEEEEECCcccc
Confidence 456789999999999 4788888633 14699999998654
No 319
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=91.12 E-value=0.86 Score=43.47 Aligned_cols=42 Identities=12% Similarity=-0.016 Sum_probs=30.9
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+||+ |..++++|...+..+|+++|.++.++
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~ 229 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKF 229 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH
Confidence 4688999999998654 33445566555433799999999998
No 320
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=91.05 E-value=0.77 Score=43.43 Aligned_cols=42 Identities=19% Similarity=0.169 Sum_probs=30.5
Q ss_pred hhCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 161 ALNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
..++++|++||-.+||+ |..++++|...+ .+|+++|.++.++
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~ 205 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYG-AFVVCTARSPRRL 205 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEcCCHHHH
Confidence 34789999999988643 334445555443 5699999999988
No 321
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=91.04 E-value=0.89 Score=43.42 Aligned_cols=42 Identities=7% Similarity=-0.081 Sum_probs=30.4
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+||+ |..++++|...+-.+|+++|.++.++
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~ 233 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKF 233 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 4678999999998654 33344555555333799999999998
No 322
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=90.78 E-value=0.97 Score=43.11 Aligned_cols=42 Identities=7% Similarity=-0.047 Sum_probs=30.6
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+||+ |..++++|...+-.+|+++|.++.++
T Consensus 188 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~ 230 (374)
T 1cdo_A 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKF 230 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 4678999999998644 33445566555323799999999998
No 323
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.71 E-value=0.73 Score=44.26 Aligned_cols=42 Identities=19% Similarity=0.021 Sum_probs=30.0
Q ss_pred hC-CCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LN-IRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~-~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
++ +++|++||-.++|+ |..++++|...+..+|+++|.++.++
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~ 233 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRL 233 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHH
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHH
Confidence 36 88999999998543 33344555554324899999999988
No 324
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.63 E-value=1 Score=42.96 Aligned_cols=42 Identities=5% Similarity=-0.150 Sum_probs=30.6
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+||+ |..++++|...+-.+|+++|.++.++
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~ 229 (374)
T 2jhf_A 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKF 229 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 4678999999998654 33445556555323799999999998
No 325
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=90.58 E-value=1 Score=42.95 Aligned_cols=42 Identities=5% Similarity=-0.108 Sum_probs=30.5
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+||+ |..++++|...+-.+|+++|.++.++
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~ 228 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKF 228 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 4678999999998644 33344555555423799999999998
No 326
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=88.49 E-value=0.86 Score=43.40 Aligned_cols=41 Identities=12% Similarity=-0.085 Sum_probs=30.6
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||=.++|+ |..++++|...+ .+|+++|.++.++
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~ 226 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKATG-AEVIVTSSSREKL 226 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHTT-CEEEEEESCHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEecCchhH
Confidence 3578999999998655 444455565543 6999999999988
No 327
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=87.68 E-value=0.54 Score=44.55 Aligned_cols=44 Identities=18% Similarity=0.095 Sum_probs=34.8
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
..+|+.|||-+||+|..+.. |..++ -+.+++|+++..+ ++++++
T Consensus 250 ~~~~~~VlDpF~GsGtt~~a-a~~~g-r~~ig~e~~~~~~~~~~~r~~ 295 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLV-AERES-RKWISFEMKPEYVAASAFRFL 295 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHH-HHHTT-CEEEEEESCHHHHHHHHGGGS
T ss_pred CCCCCEEEECCCCCCHHHHH-HHHcC-CCEEEEeCCHHHHHHHHHHHH
Confidence 47899999999999974444 44332 5799999999988 777887
No 328
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=87.64 E-value=1.3 Score=41.61 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=29.6
Q ss_pred hhCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 161 ALNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
..++ +|++||-.+||+ |..++++|...+-.+|+++|.++.++
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~ 202 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRL 202 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 4467 999999998843 33344555544323899999999887
No 329
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=87.16 E-value=0.28 Score=49.55 Aligned_cols=41 Identities=15% Similarity=-0.086 Sum_probs=32.9
Q ss_pred CCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhc
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNI 208 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l 208 (355)
.-+|+|+|||.||.+..+.+.+. -.|+|+|+++... .+.|.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHS
T ss_pred cceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhc
Confidence 45899999999999988765532 3489999999988 66665
No 330
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=86.19 E-value=5 Score=36.98 Aligned_cols=127 Identities=13% Similarity=0.119 Sum_probs=62.6
Q ss_pred EEechhcHHHHHhhCCC--------CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccC
Q psy7769 149 YCMDGASLLPVLALNIR--------PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLD 216 (355)
Q Consensus 149 ~~QD~aS~l~~~~L~~~--------pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g 216 (355)
..||+++++......+. .|.+|| +.-|.||...+++..+ ...+|+.+|.+..++ +...+. . .+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~m~~l~~k~vl-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--~--~~ 89 (293)
T 3rih_A 15 QTQGPGSMLVVESAEPAERKVMFDLSARSVL-VTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELG--E--LG 89 (293)
T ss_dssp -------------------CCTTCCTTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHT--T--SS
T ss_pred hhcCCceeeeecCCCCcccccccCCCCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--h--hC
Confidence 45666666654333221 343444 5667788888888654 336899999999888 555555 2 23
Q ss_pred cceEEEEEeccee-----------------eecccCCCCCccCCcc-ccchHHHHhhhh--HH---HHHHHHHhhcc--C
Q psy7769 217 IHALKLVKVGGSV-----------------VYSTCSLSPIQNDGVV-HMSLKRIWEETG--CE---IEIKHALKLVK--V 271 (355)
Q Consensus 217 ~~~v~~~~~Da~~-----------------lDaPCSgsG~t~~~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lk--p 271 (355)
..++.++..|... +|.-....|+.....+ ..+.+....... +. .+++.++..++ .
T Consensus 90 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~ 169 (293)
T 3rih_A 90 AGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG 169 (293)
T ss_dssp SSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS
T ss_pred CCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 2457777777643 5665555554332222 234443332222 11 45555555443 3
Q ss_pred CcEEEEEeC
Q psy7769 272 GGSVVYSTC 280 (355)
Q Consensus 272 GG~lVYsTC 280 (355)
+|+||+.+.
T Consensus 170 ~g~iV~isS 178 (293)
T 3rih_A 170 RGRVILTSS 178 (293)
T ss_dssp SCEEEEECC
T ss_pred CCEEEEEeC
Confidence 478887654
No 331
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=86.03 E-value=0.9 Score=43.84 Aligned_cols=42 Identities=14% Similarity=0.110 Sum_probs=33.7
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+||+ |..++++|...+-.+|+++|.++.|+
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~ 223 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERL 223 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 4688999999999766 66667777765434899999999988
No 332
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=85.71 E-value=0.59 Score=44.02 Aligned_cols=76 Identities=14% Similarity=-0.013 Sum_probs=46.8
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCCCc-EEEEcCCchhh--HHhhcccccc-ccCcceEE---E---EEecceeeeccc
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYPDY-YCMDGASLLPV--LALNIRPYDT-VLDIHALK---L---VKVGGSVVYSTC 234 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~g~-V~AvD~s~~Rl--l~~~l~r~~~-~~g~~~v~---~---~~~Da~~lDaPC 234 (355)
+.+.+|+|+|||.||.+..+.+.+-... |+|+|+++... .+.|...... ..++..+. + -..|...-.+||
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~ggpPC 93 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGSPC 93 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEECCCC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEecCCC
Confidence 3466999999999999988877653322 69999999988 5666541000 00111110 0 024555588999
Q ss_pred CCCCCc
Q psy7769 235 SLSPIQ 240 (355)
Q Consensus 235 SgsG~t 240 (355)
.++-+.
T Consensus 94 Q~fS~a 99 (295)
T 2qrv_A 94 NDLSIV 99 (295)
T ss_dssp GGGBTT
T ss_pred cccccc
Confidence 776533
No 333
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=85.67 E-value=3.1 Score=38.99 Aligned_cols=41 Identities=7% Similarity=-0.127 Sum_probs=29.9
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+||+ |..+.++|...+ .+|+++|.++.++
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~~~~~~ 201 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKL 201 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEeCCHHHH
Confidence 3688999999998843 333344444443 6999999999988
No 334
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=85.42 E-value=0.8 Score=43.47 Aligned_cols=45 Identities=24% Similarity=0.115 Sum_probs=34.0
Q ss_pred CCCCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCc---hhh--HHhhccc
Q psy7769 164 IRPYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASL---LPV--LALNIRP 210 (355)
Q Consensus 164 ~~pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~---~Rl--l~~~l~r 210 (355)
..+|+.|||-+||+|..+..+..+. -+.+++|+++ .-+ +++++++
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCCCCEEEecCCCCCHHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHHH
Confidence 4689999999999997555444443 5799999999 777 7777773
No 335
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=85.11 E-value=2.3 Score=41.08 Aligned_cols=44 Identities=25% Similarity=0.260 Sum_probs=30.8
Q ss_pred CCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh-HHh
Q psy7769 163 NIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV-LAL 206 (355)
Q Consensus 163 ~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl-l~~ 206 (355)
++++|++||=.+||+ |..++++|...+-.+|+++|.++.|+ +.+
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~ 255 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAK 255 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 578999999887643 33344555554434899999999998 443
No 336
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=84.69 E-value=2.1 Score=40.19 Aligned_cols=42 Identities=17% Similarity=-0.027 Sum_probs=31.9
Q ss_pred hhCCCCCCeEeeeccc--CcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 161 ALNIRPYDTVLDMCAA--PGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAg--PGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
..++++|++||-.+|| -|.-++++|...+ .+|+++|.++.++
T Consensus 139 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~ 182 (340)
T 3gms_A 139 TLNLQRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHT 182 (340)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSSTTH
T ss_pred hcccCCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCHHHH
Confidence 3468899999998876 3555556666543 6899999999988
No 337
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=84.25 E-value=1.8 Score=40.63 Aligned_cols=40 Identities=13% Similarity=-0.130 Sum_probs=30.6
Q ss_pred CCCCCCeEeeecccC-cchHHHHHHhcC-CCcEEEEcCCchhh
Q psy7769 163 NIRPYDTVLDMCAAP-GGKTLVALQTLY-PDYYCMDGASLLPV 203 (355)
Q Consensus 163 ~~~pG~~VLD~CAgP-GgKT~~la~~~~-~g~V~AvD~s~~Rl 203 (355)
++ +|++||-.+||+ |..++++|.... ..+|+++|.++.++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~ 209 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHR 209 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHH
Confidence 77 999999999854 444556666551 36899999999988
No 338
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=84.17 E-value=2.3 Score=40.50 Aligned_cols=38 Identities=8% Similarity=-0.097 Sum_probs=27.6
Q ss_pred CCCeEeeec-cc-CcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 166 PYDTVLDMC-AA-PGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 166 pG~~VLD~C-Ag-PGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
+|++||=.+ +| -|..++++|+.....+|+++|.++.++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~ 210 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ 210 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence 899998776 22 244455666654457999999999988
No 339
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=84.00 E-value=0.91 Score=43.33 Aligned_cols=71 Identities=8% Similarity=0.029 Sum_probs=45.8
Q ss_pred CCeEeeecccCcchHHHHHHhcCCC-cE-EEEcCCchhh--HHhhccccccccCcceEE---EE--EecceeeecccCCC
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTLYPD-YY-CMDGASLLPV--LALNIRPYDTVLDIHALK---LV--KVGGSVVYSTCSLS 237 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~~~g-~V-~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~---~~--~~Da~~lDaPCSgs 237 (355)
.-+|+|++||.||.+..+.+.+-.. .| +|+|+++... .+.|....-+..++..+. +. ..|.....+||.++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEEECCCCTTC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEEecCCccCc
Confidence 3589999999999998887764223 46 6999999988 677765110001111111 11 24555578999887
No 340
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=83.40 E-value=2.6 Score=39.63 Aligned_cols=41 Identities=17% Similarity=-0.026 Sum_probs=28.8
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++ +|++||-.+||+ |..++++|...+-.+|+++|.++.++
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~ 205 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRR 205 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 357 999999998843 33344555544323899999999888
No 341
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=83.07 E-value=8.8 Score=33.99 Aligned_cols=108 Identities=12% Similarity=0.011 Sum_probs=59.9
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcC-Cchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGA-SLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~-s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|.+|| +.-|.|+...+++..+ ...+|++++. +...+ +...++ . .+ .++.++..|...
T Consensus 21 ~k~vl-ItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~--~--~~-~~~~~~~~D~~~~~~~~~~~~~~~ 94 (274)
T 1ja9_A 21 GKVAL-TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELK--K--LG-AQGVAIQADISKPSEVVALFDKAV 94 (274)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--H--TT-CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHH--h--cC-CcEEEEEecCCCHHHHHHHHHHHH
Confidence 55666 5666788888888654 2367999888 66665 444443 1 12 235666666432
Q ss_pred -----eecccCCCCCccCCcc-ccchHHHHhhh--hHH---HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQNDGVV-HMSLKRIWEET--GCE---IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+...... ++. .+++.+.+.++.||++|+.+.
T Consensus 95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS 156 (274)
T 1ja9_A 95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS 156 (274)
T ss_dssp HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcC
Confidence 5666555553222221 22222222211 122 667777777766788888643
No 342
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=81.90 E-value=9.6 Score=33.99 Aligned_cols=106 Identities=9% Similarity=0.111 Sum_probs=61.9
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
.|.+|| +.-|.||...+++..+ ...+|+.+|.++.++ +.+.+. .++.++..|...
T Consensus 7 ~gk~~l-VTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 7 QGKKAI-VIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--------PRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--------CcceEEEccCCCHHHHHHHHHHHH
Confidence 355555 4556678888887654 336899999998887 443332 134556666432
Q ss_pred -----eecccCCCCCccCCcc-ccchHHHHhhhhH--H---HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQNDGVV-HMSLKRIWEETGC--E---IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l-~~~~~~l~~l~~l--Q---~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+........ . .+++.+...++.+|+||+.+.
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 5655544553322222 2333333322221 1 677888888888999998654
No 343
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=81.76 E-value=16 Score=32.43 Aligned_cols=110 Identities=14% Similarity=0.032 Sum_probs=59.6
Q ss_pred CCeEeeecccCc-chHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPG-GKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPG-gKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|.+||=.+++.| |...+++..+ ...+|++++.+.... +.+... . .+..++.++..|...
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAG--T--LDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH--T--SSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHH--h--cCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 556665555432 4677777543 336799998886554 433333 2 122246677777543
Q ss_pred -----eecccCCCCCccC----Cc-cccchHHHHhhhh--HH---HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQND----GV-VHMSLKRIWEETG--CE---IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~----~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+... .. ...+.+....... +. .+++.++..++.+|+||+.+.
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 4544444443221 11 1122332222211 11 678888888888999998654
No 344
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=81.58 E-value=1.9 Score=41.47 Aligned_cols=42 Identities=17% Similarity=0.107 Sum_probs=31.8
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+||+ |..++++|...+-.+|+++|.++.|+
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~ 223 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL 223 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence 4688999999988655 44555666665434799999999998
No 345
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=81.46 E-value=13 Score=33.32 Aligned_cols=110 Identities=16% Similarity=0.066 Sum_probs=61.2
Q ss_pred CCCeEeeecccCc-chHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-----------
Q psy7769 166 PYDTVLDMCAAPG-GKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV----------- 229 (355)
Q Consensus 166 pG~~VLD~CAgPG-gKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~----------- 229 (355)
.|..+|=-+|+.+ |....+|+.+ ...+|+.+|.+...+ +.+.++ . .+..++.++..|...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~--~--~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLE--Q--LNQPEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHG--G--GTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--h--cCCCcEEEEEccCCCHHHHHHHHHHH
Confidence 3666776666543 6666666543 337899999998877 666565 2 233345666777543
Q ss_pred ------eecccCCCCCccCCcc-----ccchHHHHhh--hhHH---HHHHHHHhhccCCcEEEEEe
Q psy7769 230 ------VYSTCSLSPIQNDGVV-----HMSLKRIWEE--TGCE---IEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 230 ------lDaPCSgsG~t~~~~l-----~~~~~~l~~l--~~lQ---~lL~~A~~~LkpGG~lVYsT 279 (355)
+|.-....|+.....+ ....+..... .++. .+...+....+.||.||..+
T Consensus 81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis 146 (256)
T 4fs3_A 81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT 146 (256)
T ss_dssp HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence 6655444443221111 1112222111 1111 45666778888999998754
No 346
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=81.22 E-value=3.7 Score=38.21 Aligned_cols=42 Identities=12% Similarity=-0.190 Sum_probs=29.1
Q ss_pred hhCCCCCCeEeeeccc--CcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 161 ALNIRPYDTVLDMCAA--PGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 161 ~L~~~pG~~VLD~CAg--PGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
..++++|++||-.+|+ -|.-+.+++... ..+|++++.++.++
T Consensus 144 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~ 187 (336)
T 4b7c_A 144 VGQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKC 187 (336)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHH
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHH
Confidence 3468899999987762 233334444443 36999999999888
No 347
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=79.89 E-value=1.4 Score=42.00 Aligned_cols=70 Identities=11% Similarity=0.157 Sum_probs=44.8
Q ss_pred eEeeecccCcchHHHHHHhcCC-CcEEEEcCCchhh--HHhhccccccc-cCcceEE---EE--EecceeeecccCCCC
Q psy7769 169 TVLDMCAAPGGKTLVALQTLYP-DYYCMDGASLLPV--LALNIRPYDTV-LDIHALK---LV--KVGGSVVYSTCSLSP 238 (355)
Q Consensus 169 ~VLD~CAgPGgKT~~la~~~~~-g~V~AvD~s~~Rl--l~~~l~r~~~~-~g~~~v~---~~--~~Da~~lDaPCSgsG 238 (355)
+|+|+|||.||.+..+.+.+-. -.|+|+|+++... .+.|....... .++..+. +. ..|.....+||.++.
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSE
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchh
Confidence 7999999999999888766432 3488999999988 67776411000 0111111 00 235555789997764
No 348
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=79.66 E-value=2.1 Score=36.60 Aligned_cols=41 Identities=20% Similarity=0.121 Sum_probs=28.0
Q ss_pred hCCCCCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl 203 (355)
.++++|++||..+| .|+....+++.. ...+|+++|.++.++
T Consensus 34 ~~~~~g~~vlV~Ga-~ggiG~~~~~~~~~~G~~V~~~~~~~~~~ 76 (198)
T 1pqw_A 34 GRLSPGERVLIHSA-TGGVGMAAVSIAKMIGARIYTTAGSDAKR 76 (198)
T ss_dssp SCCCTTCEEEETTT-TSHHHHHHHHHHHHHTCEEEEEESSHHHH
T ss_pred hCCCCCCEEEEeeC-CChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 36789999998875 344444443321 126899999998887
No 349
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=79.60 E-value=15 Score=32.54 Aligned_cols=108 Identities=14% Similarity=0.078 Sum_probs=60.2
Q ss_pred CCeEeeecccCc-chHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPG-GKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPG-gKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|.+||=.++ .| |...+++..+ ...+|+++|.+..++ +.+.++ . .+..++.++..|...
T Consensus 22 ~k~vlITGa-sg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~--~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (266)
T 3o38_A 22 GKVVLVTAA-AGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLA--D--LGLGRVEAVVCDVTSTEAVDALITQTV 96 (266)
T ss_dssp TCEEEESSC-SSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--T--TCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHH--h--cCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 555665444 44 5677776543 336899999998887 555554 2 223457777777643
Q ss_pred -----eecccCCCCCccCCcc-ccchHHHHhhhh--HH---HHHHHHHhhcc---CCcEEEEEe
Q psy7769 230 -----VYSTCSLSPIQNDGVV-HMSLKRIWEETG--CE---IEIKHALKLVK---VGGSVVYST 279 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lk---pGG~lVYsT 279 (355)
+|.-....|+.....+ ..+.+.+..... +. .+++.++..++ .+|+||+.+
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~s 160 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNA 160 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEEC
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 5665555553332222 233333332221 11 56666666654 567888754
No 350
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=78.79 E-value=3.5 Score=38.36 Aligned_cols=40 Identities=18% Similarity=0.076 Sum_probs=28.2
Q ss_pred hCCCCCCeEeeecccCcchH---HHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAPGGKT---LVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT---~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+| .|+.. .++|...+ .+|++++.++.++
T Consensus 136 ~~~~~g~~VlV~Ga-~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~ 178 (325)
T 3jyn_A 136 YQVKPGEIILFHAA-AGGVGSLACQWAKALG-AKLIGTVSSPEKA 178 (325)
T ss_dssp SCCCTTCEEEESST-TSHHHHHHHHHHHHHT-CEEEEEESSHHHH
T ss_pred cCCCCCCEEEEEcC-CcHHHHHHHHHHHHCC-CEEEEEeCCHHHH
Confidence 36789999997663 33333 44454443 6899999999988
No 351
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=77.59 E-value=20 Score=31.99 Aligned_cols=110 Identities=13% Similarity=0.108 Sum_probs=62.3
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.++.+...+ +.+.++ . .+..++.++..|...
T Consensus 10 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~--~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 10 GRSVV-VTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLD--Q--LGSGKVIGVQTDVSDRAQCDALAGRAVE 84 (262)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--T--TSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--hCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 44555 5556788888888654 336899999998887 555554 2 232456777777543
Q ss_pred ----eecccCCCCCccCCc-cccchHHHHhhhh--HH---HHHHHHHhhcc--CCcEEEEEeCC
Q psy7769 230 ----VYSTCSLSPIQNDGV-VHMSLKRIWEETG--CE---IEIKHALKLVK--VGGSVVYSTCS 281 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~Lk--pGG~lVYsTCS 281 (355)
+|.-....|+..... ...+.+....... +. .+++.+++.++ .+|++|+.+..
T Consensus 85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~ 148 (262)
T 3pk0_A 85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSI 148 (262)
T ss_dssp HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCS
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEech
Confidence 555554455332222 2233333332221 11 55666666653 45788876543
No 352
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=76.70 E-value=14 Score=34.95 Aligned_cols=40 Identities=18% Similarity=0.024 Sum_probs=31.7
Q ss_pred HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccCceEEEec
Q psy7769 260 IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEIKD 310 (355)
Q Consensus 260 ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~~~ 310 (355)
++++..+++++|||+++--||+ +.|++.|.. .|+.|+.++
T Consensus 207 e~f~~l~~~~~pgg~laTYtaa-------g~VRR~L~~----aGF~V~k~~ 246 (308)
T 3vyw_A 207 DFLSLIKERIDEKGYWVSYSSS-------LSVRKSLLT----LGFKVGSSR 246 (308)
T ss_dssp HHHHHHHTTEEEEEEEEESCCC-------HHHHHHHHH----TTCEEEEEE
T ss_pred HHHHHHHHHhCCCcEEEEEeCc-------HHHHHHHHH----CCCEEEecC
Confidence 6899999999999998854554 899999986 577776554
No 353
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=75.38 E-value=26 Score=31.84 Aligned_cols=108 Identities=10% Similarity=-0.051 Sum_probs=61.0
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh---HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV---LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl---l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.++.+.... +.+.++ . .+ .++.++..|...
T Consensus 47 gk~vl-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 47 GKNVL-ITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE--K--EG-VKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--T--TT-CCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH--h--cC-CcEEEEECCCCCHHHHHHHHHHHH
Confidence 54555 4556677888887654 336799999887644 333333 2 12 346677777543
Q ss_pred -----eecccCCCCCccCC-ccc-cchHHHHhhhh--HH---HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQNDG-VVH-MSLKRIWEETG--CE---IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~-~l~-~~~~~l~~l~~--lQ---~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+.... .+. .+.+....... +. .+++.+++.++.+|+||+.+.
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 45544444432221 121 23333322221 11 778888899999999998654
No 354
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=75.30 E-value=28 Score=31.06 Aligned_cols=110 Identities=13% Similarity=0.087 Sum_probs=60.9
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCC-chhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGAS-LLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s-~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.++.+ ...+ +.+.++ . .+ .++.++..|...
T Consensus 18 ~k~~l-VTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 18 GKVAL-VTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK--A--LG-SDAIAIKADIRQVPEIVKLFDQAV 91 (270)
T ss_dssp TCEEE-ESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--H--TT-CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH--h--cC-CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 44555 4556677788877643 23678877764 3334 444444 1 12 345666667543
Q ss_pred -----eecccCCCCCccCCcc-ccchHHHHhhhh--HH---HHHHHHHhhccCCcEEEEEeCCC
Q psy7769 230 -----VYSTCSLSPIQNDGVV-HMSLKRIWEETG--CE---IEIKHALKLVKVGGSVVYSTCSL 282 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~LkpGG~lVYsTCSl 282 (355)
+|.-....|+.....+ ..+.+....... +. .+++.+++.++.+|+||+.+.+.
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 5555555554322222 223333332221 11 67888889888899999875543
No 355
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=74.98 E-value=14 Score=34.08 Aligned_cols=105 Identities=12% Similarity=0.053 Sum_probs=62.8
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
.|..+| +..|.+|....+|..+ ...+|+.+|.+.+++ +.+.+. .++..+..|...
T Consensus 28 ~gKval-VTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g--------~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 28 NAKIAV-ITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG--------GGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp TTCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--------TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--------CCeEEEEecCCCHHHHHHHHHHHH
Confidence 354444 5556677788887654 347899999999888 433333 123445566533
Q ss_pred -----eecccCCCCCccCCcc-ccchHHHHhhhhH--H---HHHHHHHhhccCCcEEEEEe
Q psy7769 230 -----VYSTCSLSPIQNDGVV-HMSLKRIWEETGC--E---IEIKHALKLVKVGGSVVYST 279 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l-~~~~~~l~~l~~l--Q---~lL~~A~~~LkpGG~lVYsT 279 (355)
+|.-.-..|+.....+ ..+.+...+..+. - .+.+.+++.++.+|.+|..+
T Consensus 99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 6666555553333332 2344433333222 2 77888999999999988754
No 356
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=74.97 E-value=24 Score=31.24 Aligned_cols=107 Identities=8% Similarity=-0.048 Sum_probs=59.7
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+++|.+..++ +...++ . .+ .++.++..|...
T Consensus 7 ~k~vl-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 7 NATVA-VIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIE--A--AG-GRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp SCEEE-EECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHH--H--TT-CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CeEEEEECcCCCHHHHHHHHHHHHh
Confidence 44455 5556778888887653 336899999999888 555555 2 12 356777777543
Q ss_pred ---eecccCCCCCccCCc-cccchHHHHhhhh--HH---HHHHHHHhhcc--CCcEEEEEe
Q psy7769 230 ---VYSTCSLSPIQNDGV-VHMSLKRIWEETG--CE---IEIKHALKLVK--VGGSVVYST 279 (355)
Q Consensus 230 ---lDaPCSgsG~t~~~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~Lk--pGG~lVYsT 279 (355)
+|.-....|+..... ...+.+....... +. .+++.++..++ .+|+||+.+
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~is 141 (252)
T 3h7a_A 81 HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTG 141 (252)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred hCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 455544445332222 2233333332221 11 55666666553 357888754
No 357
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=74.94 E-value=15 Score=33.35 Aligned_cols=107 Identities=12% Similarity=0.076 Sum_probs=63.8
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|..+| +.-|.+|....+|..+ ...+|+.+|.+++++ +.+.++ . .+ .++.++..|...
T Consensus 7 gKval-VTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~--~--~g-~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 7 NKVVI-VTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR--G--MG-KEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TT-CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHH--h--cC-CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 44444 4556667788777654 347899999999998 666665 2 23 346777777643
Q ss_pred ----eecccCCCCCccC-Ccc-ccchHHHHhhhhHH-----HHHHHHHhhcc--CCcEEEEEe
Q psy7769 230 ----VYSTCSLSPIQND-GVV-HMSLKRIWEETGCE-----IEIKHALKLVK--VGGSVVYST 279 (355)
Q Consensus 230 ----lDaPCSgsG~t~~-~~l-~~~~~~l~~l~~lQ-----~lL~~A~~~Lk--pGG~lVYsT 279 (355)
+|.-....|+... ..+ ..+.+...+..+.- .+.+.+++.++ .+|+||..+
T Consensus 81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnis 143 (254)
T 4fn4_A 81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTA 143 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEe
Confidence 7777766664332 222 23444333332221 55666666553 368888743
No 358
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=74.75 E-value=5.4 Score=37.41 Aligned_cols=41 Identities=15% Similarity=0.010 Sum_probs=29.0
Q ss_pred hCCCCCCeEeeecc--cCcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCA--APGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CA--gPGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
..+++|++||=.+| |-|.-++++|...+ .+|++++.++.++
T Consensus 155 ~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~ 197 (342)
T 4eye_A 155 GQLRAGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAAT 197 (342)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHH
Confidence 35789999997775 22334445555443 6899999999888
No 359
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=74.72 E-value=4.3 Score=38.32 Aligned_cols=40 Identities=8% Similarity=-0.102 Sum_probs=27.9
Q ss_pred hCCCCC------CeEeeecccCcchHHHH-HHhc-C--CCc-EEEEcCCch---hh
Q psy7769 162 LNIRPY------DTVLDMCAAPGGKTLVA-LQTL-Y--PDY-YCMDGASLL---PV 203 (355)
Q Consensus 162 L~~~pG------~~VLD~CAgPGgKT~~l-a~~~-~--~g~-V~AvD~s~~---Rl 203 (355)
+++++| ++||-.+| |+....+ +++. . ..+ |+++|.++. ++
T Consensus 162 ~~~~~g~~~~~~~~VlV~Ga--G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~ 215 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGN--GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI 215 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECC--SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH
T ss_pred cCCCCCcccCCCCEEEEECC--CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH
Confidence 357899 99999987 4444444 3332 2 245 999999988 77
No 360
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=74.71 E-value=6 Score=36.81 Aligned_cols=39 Identities=18% Similarity=0.068 Sum_probs=28.1
Q ss_pred CCCCCCeEeeecccCcchH---HHHHHhcCCCcEEEEcCCchhh
Q psy7769 163 NIRPYDTVLDMCAAPGGKT---LVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 163 ~~~pG~~VLD~CAgPGgKT---~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.+++|++||-.+| .|+.. ++++... ..+|++++.++.++
T Consensus 145 ~~~~g~~vlV~Ga-~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~ 186 (334)
T 3qwb_A 145 HVKKGDYVLLFAA-AGGVGLILNQLLKMK-GAHTIAVASTDEKL 186 (334)
T ss_dssp CCCTTCEEEESST-TBHHHHHHHHHHHHT-TCEEEEEESSHHHH
T ss_pred cCCCCCEEEEECC-CCHHHHHHHHHHHHC-CCEEEEEeCCHHHH
Confidence 6789999998874 33333 3444443 36899999999988
No 361
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=74.38 E-value=23 Score=32.25 Aligned_cols=109 Identities=11% Similarity=-0.047 Sum_probs=60.5
Q ss_pred CCCeEeeecccCc-chHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-----------
Q psy7769 166 PYDTVLDMCAAPG-GKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV----------- 229 (355)
Q Consensus 166 pG~~VLD~CAgPG-gKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~----------- 229 (355)
.|.+||=.+++.| |...+++..+ ...+|+.++.+.... +.+... . ..++.++..|...
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~----~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAE--E----LGAFVAGHCDVADAASIDAVFETL 103 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHH--H----HTCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH--h----cCCceEEECCCCCHHHHHHHHHHH
Confidence 4667777666643 4777776543 236799999886544 333222 1 1235666666543
Q ss_pred ------eecccCCCCCcc----CCc-cccchHHHHhhh--hHH---HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 ------VYSTCSLSPIQN----DGV-VHMSLKRIWEET--GCE---IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 ------lDaPCSgsG~t~----~~~-l~~~~~~l~~l~--~lQ---~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+.. ... ...+.+...... ++. .+++.+++.++.+|+||+.+.
T Consensus 104 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 104 EKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 565555555332 122 122233222221 111 678888888888999998654
No 362
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=74.18 E-value=12 Score=35.34 Aligned_cols=41 Identities=12% Similarity=-0.122 Sum_probs=29.0
Q ss_pred hCCCCCCeEeeecc-c-CcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCA-A-PGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CA-g-PGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+| | -|..++++|... ..+|++++.++.++
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~ 201 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKS 201 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHH
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHH
Confidence 46889999998874 2 233344555544 35899999998888
No 363
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=74.11 E-value=15 Score=32.48 Aligned_cols=109 Identities=6% Similarity=-0.108 Sum_probs=58.7
Q ss_pred CCCeEeeeccc-CcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-----------
Q psy7769 166 PYDTVLDMCAA-PGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV----------- 229 (355)
Q Consensus 166 pG~~VLD~CAg-PGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~----------- 229 (355)
.+.+||=.+++ .||...+++..+ ...+|++++.+.... +.+... . . ..+.++..|...
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~--~~~~~~~~Dv~~~~~v~~~~~~~ 86 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAA--E--F--GSELVFPCDVADDAQIDALFASL 86 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH--H--T--TCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHH--H--c--CCcEEEECCCCCHHHHHHHHHHH
Confidence 46677766653 377888877643 236788888875443 333222 1 1 124455555432
Q ss_pred ------eecccCCCCCccC----Cc-cc-cchHHHHhhhhHH-----HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 ------VYSTCSLSPIQND----GV-VH-MSLKRIWEETGCE-----IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 ------lDaPCSgsG~t~~----~~-l~-~~~~~l~~l~~lQ-----~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+... .. .. .+.+.+......- .+++.+++.++.+|+||+.+.
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 4555444443222 11 21 2333333222211 677888888888899888654
No 364
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=74.10 E-value=19 Score=32.75 Aligned_cols=109 Identities=14% Similarity=-0.000 Sum_probs=61.0
Q ss_pred CCCeEeeecccC-cchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-----------
Q psy7769 166 PYDTVLDMCAAP-GGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV----------- 229 (355)
Q Consensus 166 pG~~VLD~CAgP-GgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~----------- 229 (355)
.|.+||=.+++. +|...+++..+ ...+|+++|.+.... +.+... . . ..+.++..|...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~--~--~~~~~~~~Dv~d~~~v~~~~~~~ 102 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAE--S--L--GVKLTVPCDVSDAESVDNMFKVL 102 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHH--H--H--TCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH--h--c--CCeEEEEcCCCCHHHHHHHHHHH
Confidence 356677666653 47777777643 336899999987655 333333 1 1 123556666533
Q ss_pred ------eecccCCCCCccC----Cc-cccchHHHHhhhh--HH---HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 ------VYSTCSLSPIQND----GV-VHMSLKRIWEETG--CE---IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 ------lDaPCSgsG~t~~----~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+... .. ...+.+....... +. .+++.++..++.+|+||+.+.
T Consensus 103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 5665555553321 12 1223332222221 11 678888888888999998654
No 365
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=74.08 E-value=15 Score=33.53 Aligned_cols=108 Identities=12% Similarity=0.040 Sum_probs=63.4
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|..+| +.-|.+|....+|..+ ...+|+.+|++..++ ..+.+. . .+ .++..+..|...
T Consensus 9 gKval-VTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~--~--~g-~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 9 GKTAL-VTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLT--R--KG-YDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHH--H--TT-CCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--h--cC-CcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 44444 5556677888887654 347899999999888 555554 2 12 245566666543
Q ss_pred ----eecccCCCCCccCCcc-ccchHHHHhhhhHH-----HHHHHHHhhc---cCCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGVV-HMSLKRIWEETGCE-----IEIKHALKLV---KVGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l-~~~~~~l~~l~~lQ-----~lL~~A~~~L---kpGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+...+..+.- .+.+++++.+ ..||+||..+.
T Consensus 83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS 146 (255)
T 4g81_D 83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGS 146 (255)
T ss_dssp TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEee
Confidence 6666655664433332 34444443332222 5666777766 24688887543
No 366
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=73.90 E-value=4.4 Score=38.66 Aligned_cols=40 Identities=10% Similarity=-0.100 Sum_probs=30.6
Q ss_pred CCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 163 NIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 163 ~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
++++|++||-.+||+ |..++++|... ..+|+++|.++.++
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~ 231 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKR 231 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHH
Confidence 688999999998754 44445566554 35799999999988
No 367
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=73.47 E-value=8.2 Score=39.96 Aligned_cols=38 Identities=18% Similarity=0.340 Sum_probs=28.0
Q ss_pred HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHhhhhccCceEEE
Q psy7769 260 IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKRIWEETGCEIEI 308 (355)
Q Consensus 260 ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~~~~~~~~~~~~ 308 (355)
+++...+++++|||++...||. ..|+..|.+ .|+.+..
T Consensus 192 ~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~l~~----aGf~~~~ 229 (689)
T 3pvc_A 192 QLFNAMARMTRPGGTFSTFTAA-------GFVRRGLQQ----AGFNVTK 229 (689)
T ss_dssp HHHHHHHHHEEEEEEEEESCCC-------HHHHHHHHH----TTCEEEE
T ss_pred HHHHHHHHHhCCCCEEEeccCc-------HHHHHHHHh----CCeEEEe
Confidence 6788888999999988777776 577777765 3555544
No 368
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=73.36 E-value=25 Score=31.37 Aligned_cols=109 Identities=12% Similarity=0.019 Sum_probs=61.7
Q ss_pred CCeEeeecccCcchHHHHHHhcC--CCcEEEEcCCch---hh--HHhhccccccccCcceEEEEEeccee----------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTLY--PDYYCMDGASLL---PV--LALNIRPYDTVLDIHALKLVKVGGSV---------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~~--~g~V~AvD~s~~---Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~---------- 229 (355)
|.+|| +.-|.||...+++..+. ..+|+.++.+.. ++ +...+. . .+ .++.++..|...
T Consensus 11 ~k~vl-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 11 NKVIV-IAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELE--D--QG-AKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp TCEEE-EETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHH--T--TT-CEEEEEECCCCSHHHHHHHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHH--h--cC-CcEEEEECCCCCHHHHHHHHHH
Confidence 44555 45566778888887542 257888766533 33 333343 1 12 356677777543
Q ss_pred -------eecccCCCCCccCCcc-ccchHHHHhhh--hHH---HHHHHHHhhccCCcEEEEEeCC
Q psy7769 230 -------VYSTCSLSPIQNDGVV-HMSLKRIWEET--GCE---IEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 230 -------lDaPCSgsG~t~~~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~LkpGG~lVYsTCS 281 (355)
+|.-....|+.....+ ..+.+...... ++. .+++.+++.++.+|++|+.+.+
T Consensus 85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~ 149 (262)
T 3ksu_A 85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS 149 (262)
T ss_dssp HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence 6665555554333332 23333333222 222 6788888888888999986543
No 369
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=73.33 E-value=35 Score=30.12 Aligned_cols=109 Identities=8% Similarity=-0.014 Sum_probs=60.8
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+++|.+...+ +...++ . .+ .++.++..|...
T Consensus 6 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 6 EKVVI-ITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIE--Q--FP-GQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--C--ST-TCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 44455 5556788888888654 336899999999888 555555 2 12 356777777543
Q ss_pred ----eecccCCCCCccCCcc-ccchHHHHhhh--hHH---HHHHHHHhhc---cCCcEEEEEeCC
Q psy7769 230 ----VYSTCSLSPIQNDGVV-HMSLKRIWEET--GCE---IEIKHALKLV---KVGGSVVYSTCS 281 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~L---kpGG~lVYsTCS 281 (355)
+|.-....|+.....+ ..+.+...... ++. .+++.+++.+ +.+|+||+.+.+
T Consensus 80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 144 (257)
T 3imf_A 80 KFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVAT 144 (257)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCG
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECch
Confidence 5655544553322221 22333222221 111 4555665554 236888886543
No 370
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=72.68 E-value=22 Score=31.90 Aligned_cols=109 Identities=12% Similarity=0.007 Sum_probs=58.8
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcC-------------Cchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGA-------------SLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~-------------s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
.|.+|| +.-|.||...+++..+ ...+|+++|. +..++ +.+.+. . .+ .++.++..|..
T Consensus 14 ~gk~~l-VTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~ 87 (280)
T 3pgx_A 14 QGRVAF-ITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE--D--QG-RKALTRVLDVR 87 (280)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH--T--TT-CCEEEEECCTT
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHH--h--cC-CeEEEEEcCCC
Confidence 354555 4556677888887654 3368999987 45555 444443 1 12 34566666754
Q ss_pred e-----------------eecccCCCCCccCCcc-ccchHHHHhhhh--HH---HHHHHHHhhcc---CCcEEEEEeC
Q psy7769 229 V-----------------VYSTCSLSPIQNDGVV-HMSLKRIWEETG--CE---IEIKHALKLVK---VGGSVVYSTC 280 (355)
Q Consensus 229 ~-----------------lDaPCSgsG~t~~~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lk---pGG~lVYsTC 280 (355)
. +|.-....|+.....+ ..+.+...+... +. .+++.+++.++ .+|+||+.+.
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS 165 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS 165 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence 3 5655555554332222 233333332221 11 56666666653 2688888654
No 371
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=72.58 E-value=18 Score=33.00 Aligned_cols=109 Identities=11% Similarity=0.031 Sum_probs=60.9
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
.|..||= .-|.||...+++..+ ...+|+.++.+..++ +.+.+. . .+ .++.++..|...
T Consensus 30 ~gk~vlV-TGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 30 DGRAAVV-TGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLR--G--QG-FDAHGVVCDVRHLDEMVRLADEAF 103 (301)
T ss_dssp TTCEEEE-ETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEE-eCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--h--cC-CceEEEEccCCCHHHHHHHHHHHH
Confidence 4556664 555688888887643 336899999999888 555554 2 12 246666777543
Q ss_pred -----eecccCCCCCccCCcc-ccchHHHHhhhhH--H---HHHHHHHhhccC---CcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQNDGVV-HMSLKRIWEETGC--E---IEIKHALKLVKV---GGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l-~~~~~~l~~l~~l--Q---~lL~~A~~~Lkp---GG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+........ . .+++.++..++. +|+||+.+.
T Consensus 104 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS 168 (301)
T 3tjr_A 104 RLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTAS 168 (301)
T ss_dssp HHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 5555444453322221 2333333322211 1 566666665543 678888643
No 372
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=72.53 E-value=24 Score=31.66 Aligned_cols=107 Identities=11% Similarity=0.072 Sum_probs=58.8
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.++.+..++ +.+.+. . .+ .++.++..|...
T Consensus 4 ~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 4 DKVIL-ITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIR--D--AG-GTALAQVLDVTDRHSVAAFAQAAVD 77 (264)
T ss_dssp TCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH--H--TT-CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--h--cC-CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 33444 4556688888887654 336899999998888 555554 2 12 345666666543
Q ss_pred ----eecccCCCCCccCCcc-ccchHHHHhhhhH--H---HHHHHHHhhc--cCCcEEEEEe
Q psy7769 230 ----VYSTCSLSPIQNDGVV-HMSLKRIWEETGC--E---IEIKHALKLV--KVGGSVVYST 279 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l-~~~~~~l~~l~~l--Q---~lL~~A~~~L--kpGG~lVYsT 279 (355)
+|.-....|+.....+ ..+.+........ . .+.+.+++.+ +.+|+||+.+
T Consensus 78 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~is 139 (264)
T 3tfo_A 78 TWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIG 139 (264)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 5555544553322222 2233333222211 1 4556666655 2467888754
No 373
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=71.90 E-value=28 Score=30.99 Aligned_cols=107 Identities=12% Similarity=0.078 Sum_probs=58.8
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCC------------chhh--HHhhccccccccCcceEEEEEeccee-
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGAS------------LLPV--LALNIRPYDTVLDIHALKLVKVGGSV- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s------------~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.+|.+ ..++ +...+. . .+ .++.++..|...
T Consensus 10 gk~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~~~ 83 (287)
T 3pxx_A 10 DKVVL-VTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE--K--TG-RKAYTAEVDVRDR 83 (287)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHH--H--TT-SCEEEEECCTTCH
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHH--h--cC-CceEEEEccCCCH
Confidence 44555 4556678888887654 33689999887 4444 333333 1 11 346666666543
Q ss_pred ----------------eecccCCCCCccCCccccchHHHHhhh--hHH---HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 ----------------VYSTCSLSPIQNDGVVHMSLKRIWEET--GCE---IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 ----------------lDaPCSgsG~t~~~~l~~~~~~l~~l~--~lQ---~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+.... ...+.+...... ++. .+++.+++.++.+|+||+.+.
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLG-AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCC-TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCccc-CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 55544444432111 112222222221 111 678888888888999998654
No 374
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=71.70 E-value=33 Score=30.75 Aligned_cols=110 Identities=9% Similarity=0.060 Sum_probs=61.3
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCc-hhh--HHhhccccccccCcceEEEEEeccee-----------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASL-LPV--LALNIRPYDTVLDIHALKLVKVGGSV----------- 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~-~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~----------- 229 (355)
.|.+|| +.-|.||...+++..+ ...+|+.++.+. .++ +...++ . .+ .++.++..|...
T Consensus 30 ~gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 30 AGKTAF-VTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE--Q--AG-GRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--H--TT-CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH--h--cC-CcEEEEECCCCCHHHHHHHHHHH
Confidence 354555 4555677888887644 236788876554 444 444444 1 12 245666666543
Q ss_pred ------eecccCCCCCccCCcc-ccchHHHHhhh--hHH---HHHHHHHhhccCCcEEEEEeCC
Q psy7769 230 ------VYSTCSLSPIQNDGVV-HMSLKRIWEET--GCE---IEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 230 ------lDaPCSgsG~t~~~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~LkpGG~lVYsTCS 281 (355)
+|.-....|+.....+ ..+.+...... ++. .+++.+.+.++.+|++|+.+.+
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~ 167 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN 167 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence 5555444453322222 23333333222 122 6788888888889999987654
No 375
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=71.48 E-value=36 Score=30.06 Aligned_cols=110 Identities=7% Similarity=-0.015 Sum_probs=60.8
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
.|.+|| +.-|.||...+++..+ ...+|++++.+..++ +.+.+. . .+ .++.++..|...
T Consensus 28 ~~k~vl-ITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 28 SGQVAV-VTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIV--A--AG-GEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TT-CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--H--hC-CceeEEEecCCCHHHHHHHHHHHH
Confidence 355566 4556788888888643 336899999999887 555554 2 12 356777777543
Q ss_pred -----eecccCCCCC-ccCCcc-ccchHHHHhhhhHH-----HHHHHHHhhc--cCCcEEEEEeCC
Q psy7769 230 -----VYSTCSLSPI-QNDGVV-HMSLKRIWEETGCE-----IEIKHALKLV--KVGGSVVYSTCS 281 (355)
Q Consensus 230 -----lDaPCSgsG~-t~~~~l-~~~~~~l~~l~~lQ-----~lL~~A~~~L--kpGG~lVYsTCS 281 (355)
+|.-....|+ .....+ ..+.+......... .+++.++..+ +.+|+||+.+..
T Consensus 102 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~ 167 (262)
T 3rkr_A 102 AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSL 167 (262)
T ss_dssp HHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred HhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEech
Confidence 4554444442 111221 12333333222111 5566666655 346888886543
No 376
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=70.17 E-value=20 Score=31.78 Aligned_cols=108 Identities=9% Similarity=-0.046 Sum_probs=59.5
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.+|.+..++ +.+.+. . .+ .++.++..|...
T Consensus 12 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 12 DAVAI-VTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIR--Q--AG-GKAIGLECNVTDEQHREAVIKAALD 85 (256)
T ss_dssp TCEEE-ECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHH--H--TT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 44455 5556778888887643 236899999998887 555554 2 12 346666666543
Q ss_pred ----eecccCCCCCccCCccccchHHHHhhh--hHH---HHHHHHHhhcc--CCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGVVHMSLKRIWEET--GCE---IEIKHALKLVK--VGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l~~~~~~l~~l~--~lQ---~lL~~A~~~Lk--pGG~lVYsTC 280 (355)
+|.-....|+.....+..+.+...... ++. .+++.+++.++ .+|+||+.+.
T Consensus 86 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS 147 (256)
T 3gaf_A 86 QFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISS 147 (256)
T ss_dssp HHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 555544444322222222333322221 111 56666666653 3578887544
No 377
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=69.83 E-value=4.6 Score=37.42 Aligned_cols=40 Identities=15% Similarity=-0.001 Sum_probs=28.2
Q ss_pred CCCCCC-eEeeecc--cCcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 163 NIRPYD-TVLDMCA--APGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 163 ~~~pG~-~VLD~CA--gPGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
++++|+ +||=.+| |-|..+.++|...+ .+|++++.++.++
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~ 187 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEH 187 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCH
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHH
Confidence 578886 8988776 23334455555543 6899999998888
No 378
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=69.74 E-value=41 Score=30.01 Aligned_cols=111 Identities=13% Similarity=0.047 Sum_probs=61.2
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.+|.+...+ +.+.++ .......++.++..|...
T Consensus 11 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 11 DRTYL-VTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELE--ALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--TTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--HhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 44555 4556788888888653 346899999998887 555554 210111257777777643
Q ss_pred ----eecccCCCCCccC-Ccc-ccchHHHHhhh--hHH---HHHHHHHhhc--cCCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQND-GVV-HMSLKRIWEET--GCE---IEIKHALKLV--KVGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~-~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~L--kpGG~lVYsTC 280 (355)
+|.-....|+... ..+ ..+.+...... ++. .+++.+++.+ +.+|+||+.+.
T Consensus 88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS 151 (281)
T 3svt_A 88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISS 151 (281)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeC
Confidence 5655544553121 121 22333222221 121 5666666665 34678887543
No 379
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=69.32 E-value=23 Score=31.95 Aligned_cols=109 Identities=10% Similarity=0.071 Sum_probs=60.0
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
.|.+|| +.-|.||...+++..+ ...+|+.++.+..++ +.+.+. . .+ .++.++..|...
T Consensus 31 ~gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 31 SGKRAL-ITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIA--G--VG-GKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHH--H--TT-CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CeEEEEEcCCCCHHHHHHHHHHHH
Confidence 355555 5556688888888654 336899999998887 555554 2 12 235566666543
Q ss_pred -----eecccCCCCCccCCc-cccchHHHHhhh--hHH---HHHHHHHhhccC---CcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQNDGV-VHMSLKRIWEET--GCE---IEIKHALKLVKV---GGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~-l~~~~~~l~~l~--~lQ---~lL~~A~~~Lkp---GG~lVYsTC 280 (355)
+|.-....|+..... ...+.+.+.... ++. .+++.+++.++. ||+||+.+.
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS 169 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTAS 169 (276)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECc
Confidence 555554455333222 222333332221 111 556666665543 578887643
No 380
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=69.24 E-value=31 Score=30.94 Aligned_cols=57 Identities=11% Similarity=-0.002 Sum_probs=36.6
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +.-|.||.+.+++..+ ...+|++++.++.++ +...+. . .+..++.++..|..
T Consensus 28 ~k~vl-ITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~~~~~~~~~~Dl~ 88 (286)
T 1xu9_A 28 GKKVI-VTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL--E--LGAASAHYIAGTME 88 (286)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--HTCSEEEEEECCTT
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--H--hCCCceEEEeCCCC
Confidence 55666 5556788888887643 236899999998887 444443 1 12235666666654
No 381
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=69.17 E-value=23 Score=31.37 Aligned_cols=111 Identities=11% Similarity=0.029 Sum_probs=59.3
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...++++.+ ...+|+.++.+..++ +.+.+. ....+..++.++..|...
T Consensus 7 ~k~~l-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 7 KGLAI-ITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIM--RSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCEEE-EESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHH--HHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--HhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 44444 5556788888877643 236899999998887 444443 100122345666666543
Q ss_pred ----eecccCCCCCccCCccccchHHHHhhhh--HH---HHHHHHHhhcc--CCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGVVHMSLKRIWEETG--CE---IEIKHALKLVK--VGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l~~~~~~l~~l~~--lQ---~lL~~A~~~Lk--pGG~lVYsTC 280 (355)
+|.-....|+.....+..+.+....... +. .+++.++..++ .+|+||+.+.
T Consensus 84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS 145 (250)
T 3nyw_A 84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVAS 145 (250)
T ss_dssp HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 6666555554322222222222222111 11 55666666553 4578887544
No 382
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=69.04 E-value=35 Score=30.69 Aligned_cols=105 Identities=14% Similarity=0.109 Sum_probs=57.5
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+++|.+..++ +...+. ..+.++..|...
T Consensus 27 ~k~vl-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (277)
T 4dqx_A 27 QRVCI-VTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG--------SKAFGVRVDVSSAKDAESMVEKTTA 97 (277)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--------TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--------CceEEEEecCCCHHHHHHHHHHHHH
Confidence 44555 5556788888888654 336899999998777 333322 124555556432
Q ss_pred ----eecccCCCCCccCCc-cccchHHHHhhhh--HH---HHHHHHHhhccC--CcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGV-VHMSLKRIWEETG--CE---IEIKHALKLVKV--GGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~Lkp--GG~lVYsTC 280 (355)
+|.-....|+..... ...+.+....... +. .+++.+++.++. +|+||+.+.
T Consensus 98 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS 160 (277)
T 4dqx_A 98 KWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTS 160 (277)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECC
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECc
Confidence 555544445332222 2233333332221 11 566777776654 578888654
No 383
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=68.72 E-value=7 Score=35.76 Aligned_cols=39 Identities=15% Similarity=0.077 Sum_probs=28.6
Q ss_pred CCCCCeEeeecc-c-CcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 164 IRPYDTVLDMCA-A-PGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 164 ~~pG~~VLD~CA-g-PGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
+++|++||-.+| | -|..+.++|...+ .+|+++|.++.++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~ 163 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEKL 163 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHH
Confidence 789999999886 2 2334445555443 5899999999888
No 384
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=68.69 E-value=3.1 Score=43.89 Aligned_cols=44 Identities=16% Similarity=0.052 Sum_probs=33.8
Q ss_pred CCCCeEeeecccCcchHHHHHHhcCC-----CcEEEEcCCchhh--HHhhc
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQTLYP-----DYYCMDGASLLPV--LALNI 208 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~~~~~-----g~V~AvD~s~~Rl--l~~~l 208 (355)
+.-.+|||++||.||.++-+-+.+.. -.++|+|+++..+ .+.|.
T Consensus 210 ~k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 210 TRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp CEEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 34458999999999999887665311 2589999999998 66664
No 385
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=68.62 E-value=36 Score=29.56 Aligned_cols=108 Identities=12% Similarity=0.043 Sum_probs=59.1
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|++++.+...+ +.+.++ . .+ .++.++..|...
T Consensus 5 ~k~vl-ITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 5 EKVAL-VTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMK--E--KG-FKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH--H--TT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CceEEEEecCCCHHHHHHHHHHHHH
Confidence 34455 4556788888887643 336899999998887 555554 2 12 246667767543
Q ss_pred ----eecccCCCCCccCCcc-ccchHHHHhhhh--HH---HHHHHHHhhc--cCCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGVV-HMSLKRIWEETG--CE---IEIKHALKLV--KVGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~L--kpGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+....... +. .+++.+++.+ +.+|++|+.+.
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS 141 (247)
T 3lyl_A 79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGS 141 (247)
T ss_dssp TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcc
Confidence 4555544553322221 223333322211 11 4556666554 34578887654
No 386
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=68.39 E-value=42 Score=30.01 Aligned_cols=108 Identities=17% Similarity=0.109 Sum_probs=58.1
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh---HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV---LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl---l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|.+|| +.-|.||...+++..+ ...+|++++.+.... +.+.+. . .+ .++.++..|...
T Consensus 29 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~~~~~~~~~~~~~~ 102 (283)
T 1g0o_A 29 GKVAL-VTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK--K--NG-SDAACVKANVGVVEDIVRMFEEAV 102 (283)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--H--TT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH--H--hC-CCeEEEEcCCCCHHHHHHHHHHHH
Confidence 44455 5556788888887654 236789988886543 333333 1 12 235566666432
Q ss_pred -----eecccCCCCCccCCcc-ccchHHHHhhh--hHH---HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQNDGVV-HMSLKRIWEET--GCE---IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+...... ++. .+++.+.+.++.+|+||+.+.
T Consensus 103 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 103 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 4554444443222221 12233222221 122 677788888777889988643
No 387
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=68.24 E-value=28 Score=31.16 Aligned_cols=109 Identities=12% Similarity=0.021 Sum_probs=60.0
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEc-CCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDG-ASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD-~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|..|| +.-|.||...+++..+ ...+|+.++ .+...+ +.+.+. . .+ .++.++..|...
T Consensus 27 ~k~~l-VTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dl~~~~~v~~~~~~~~ 100 (267)
T 3u5t_A 27 NKVAI-VTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE--A--AG-GKALTAQADVSDPAAVRRLFATAE 100 (267)
T ss_dssp CCEEE-EESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHH--H--TT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH--h--cC-CeEEEEEcCCCCHHHHHHHHHHHH
Confidence 54555 5556777888877643 225677764 444444 444444 1 12 245666666543
Q ss_pred -----eecccCCCCCccCCcc-ccchHHHHhhh--hHH---HHHHHHHhhccCCcEEEEEeCC
Q psy7769 230 -----VYSTCSLSPIQNDGVV-HMSLKRIWEET--GCE---IEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~LkpGG~lVYsTCS 281 (355)
+|.-....|+.....+ ..+.+.+.... ++. .+++.+++.++.+|+||+.+.+
T Consensus 101 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~ 163 (267)
T 3u5t_A 101 EAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS 163 (267)
T ss_dssp HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence 6666555554322222 22333332221 222 6788888888889999987643
No 388
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=68.13 E-value=28 Score=30.67 Aligned_cols=109 Identities=14% Similarity=0.081 Sum_probs=57.7
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc--ee-----------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG--SV----------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da--~~----------- 229 (355)
|..|| +.-|.||...+++..+ ...+|+.+|.+..++ +.+.+. . .+...+.++..|. ..
T Consensus 12 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (252)
T 3f1l_A 12 DRIIL-VTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHIN--E--ETGRQPQWFILDLLTCTSENCQQLAQRI 86 (252)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--HHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--hcCCCceEEEEecccCCHHHHHHHHHHH
Confidence 44455 5556778888887643 336899999998887 444443 1 1112345555554 21
Q ss_pred ------eecccCCCCCccCC-c-cccchHHHHhhhh--HH---HHHHHHHhhc--cCCcEEEEEeC
Q psy7769 230 ------VYSTCSLSPIQNDG-V-VHMSLKRIWEETG--CE---IEIKHALKLV--KVGGSVVYSTC 280 (355)
Q Consensus 230 ------lDaPCSgsG~t~~~-~-l~~~~~~l~~l~~--lQ---~lL~~A~~~L--kpGG~lVYsTC 280 (355)
+|.-....|+.... . ...+++....... +. .+++.+++.+ +.+|+||+.+.
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS 152 (252)
T 3f1l_A 87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSS 152 (252)
T ss_dssp HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 45544444432221 1 1233333322221 11 5666776666 34688888544
No 389
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=67.63 E-value=39 Score=30.52 Aligned_cols=109 Identities=15% Similarity=0.069 Sum_probs=61.3
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
.|..|| +.-|.||...+++..+ ...+|+++|.+..++ +...+. . .+ .++.++..|...
T Consensus 27 ~~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (283)
T 3v8b_A 27 PSPVAL-ITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIV--G--AG-GQAIALEADVSDELQMRNAVRDLV 100 (283)
T ss_dssp CCCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHT--T--TT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CcEEEEEccCCCHHHHHHHHHHHH
Confidence 354555 4556778888888643 336899999998887 555555 2 12 346677777543
Q ss_pred -----eecccCCCCCccC-Ccc-ccchHHHHhhhh--HH---HHHHHHHhhcc--CCcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQND-GVV-HMSLKRIWEETG--CE---IEIKHALKLVK--VGGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~-~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lk--pGG~lVYsTC 280 (355)
+|.-....|+... ..+ ..+.+....... +. .+++.+++.++ .+|+||+.+.
T Consensus 101 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS 165 (283)
T 3v8b_A 101 LKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSS 165 (283)
T ss_dssp HHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcC
Confidence 5665555553222 121 123332222211 11 55666666553 3688888654
No 390
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=67.57 E-value=33 Score=30.28 Aligned_cols=106 Identities=9% Similarity=0.054 Sum_probs=57.7
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
.|.+|| +.-|.||...+++..+ ...+|+.+|.+..++ +...+. .++.++..|...
T Consensus 7 ~~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSAL-ITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG--------PAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--------TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--------CCceEEEeeCCCHHHHHHHHHHHH
Confidence 355555 4556788888888654 336899999998877 333332 124555566432
Q ss_pred -----eecccCCCCCccCCc-cccchHHHHhhh--hHH---HHHHHHHhhccC---CcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQNDGV-VHMSLKRIWEET--GCE---IEIKHALKLVKV---GGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~-l~~~~~~l~~l~--~lQ---~lL~~A~~~Lkp---GG~lVYsTC 280 (355)
+|.-....|+..... ...+.+...+.. ++. .+++.+.+.++. +|+||+.+.
T Consensus 78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS 142 (259)
T 4e6p_A 78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMAS 142 (259)
T ss_dssp HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECC
Confidence 555544445332222 222333333221 111 556666665533 688888543
No 391
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=67.46 E-value=7.2 Score=36.17 Aligned_cols=41 Identities=20% Similarity=-0.015 Sum_probs=28.7
Q ss_pred hCCCCCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+| .|+....+++.. ...+|+++|.++.++
T Consensus 141 ~~~~~g~~vlV~Ga-~ggiG~~~~~~~~~~G~~V~~~~~~~~~~ 183 (333)
T 1v3u_A 141 CGVKGGETVLVSAA-AGAVGSVVGQIAKLKGCKVVGAAGSDEKI 183 (333)
T ss_dssp SCCCSSCEEEEEST-TBHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred hCCCCCCEEEEecC-CCcHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 36789999999886 344444444322 236899999998888
No 392
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=67.38 E-value=20 Score=32.05 Aligned_cols=109 Identities=9% Similarity=0.051 Sum_probs=58.8
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.++.+..++ +.+.+.. . .+ .++.++..|...
T Consensus 20 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~--~~-~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 20 GKRAL-ITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGE-Q--FG-TDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-H--HC-CCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-h--cC-CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 44555 5556788888888654 336899999998887 4444431 0 11 246667766543
Q ss_pred ----eecccCCCCCccCCc-cccchHHHHhhhh--HH---HHHHHHHhhcc---CCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGV-VHMSLKRIWEETG--CE---IEIKHALKLVK---VGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~Lk---pGG~lVYsTC 280 (355)
+|.-....|+..... ...+.+....... +. .+++.+.+.++ .+|+||+.+.
T Consensus 95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS 158 (266)
T 4egf_A 95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVAS 158 (266)
T ss_dssp HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcc
Confidence 455444444322222 2233333322211 11 55566666554 3688888644
No 393
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=67.37 E-value=22 Score=32.20 Aligned_cols=110 Identities=12% Similarity=0.040 Sum_probs=59.1
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
.|.+|| +.-|.||...+++..+ ...+|+++|.+..++ +.+.+. . .+...+.++..|...
T Consensus 32 ~gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (281)
T 4dry_A 32 EGRIAL-VTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIG--G--RTGNIVRAVVCDVGDPDQVAALFAAVR 106 (281)
T ss_dssp --CEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--HHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--h--cCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 354555 5556788888888654 346899999998887 444443 1 122234666667543
Q ss_pred -----eecccCCCCCccC-Ccc-ccchHHHHhhhhH--H---HHHHHHHhhccC----CcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQND-GVV-HMSLKRIWEETGC--E---IEIKHALKLVKV----GGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~-~~l-~~~~~~l~~l~~l--Q---~lL~~A~~~Lkp----GG~lVYsTC 280 (355)
+|.-....|+... ..+ ..+.+........ . .+.+.+++.++. +|+||+.+.
T Consensus 107 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS 173 (281)
T 4dry_A 107 AEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGS 173 (281)
T ss_dssp HHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence 4555444453222 122 2333333322211 1 456666665543 688888643
No 394
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=67.00 E-value=27 Score=31.61 Aligned_cols=108 Identities=11% Similarity=0.069 Sum_probs=59.3
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+++|.+..++ +...+. . .+ .++.++..|...
T Consensus 8 gk~vl-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (280)
T 3tox_A 8 GKIAI-VTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIA--G--GG-GEAAALAGDVGDEALHEALVELAVR 81 (280)
T ss_dssp TCEEE-ESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHT--T--TT-CCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--h--cC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 44555 4556788888887643 336899999999888 555554 2 12 345666666532
Q ss_pred ----eecccCCCCCccC-Ccc-ccchHHHHhhhh--HH---HHHHHHHhhccC--CcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQND-GVV-HMSLKRIWEETG--CE---IEIKHALKLVKV--GGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~-~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lkp--GG~lVYsTC 280 (355)
+|.-....|+... ..+ ..+.+....... +. .+++.+++.++. +|+||+.+.
T Consensus 82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS 145 (280)
T 3tox_A 82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSS 145 (280)
T ss_dssp HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 5555444453221 222 233333322221 11 556666665543 678888654
No 395
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=66.83 E-value=30 Score=30.73 Aligned_cols=110 Identities=8% Similarity=-0.026 Sum_probs=59.9
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
.|.+|| +.-|.||...+++..+ ...+|+.+|.+..++ +.+.+. . .+ .++.++..|...
T Consensus 10 ~~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 10 TDKVVV-ISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVT--D--TG-RRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTCEEE-EESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcEEE-EECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHH--h--cC-CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 355555 4556677888887644 336899999998888 555554 2 12 346677777543
Q ss_pred -----eecccCCCCCccC-Ccc-ccchHHHHhhhh--HH---HHHHHHHhhcc-CCcEEEEEeCC
Q psy7769 230 -----VYSTCSLSPIQND-GVV-HMSLKRIWEETG--CE---IEIKHALKLVK-VGGSVVYSTCS 281 (355)
Q Consensus 230 -----lDaPCSgsG~t~~-~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lk-pGG~lVYsTCS 281 (355)
+|.-....|+... ..+ ..+.+....... +. .+++.+...++ .+|+||+.+..
T Consensus 84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~ 148 (264)
T 3ucx_A 84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSM 148 (264)
T ss_dssp HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCG
T ss_pred HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcc
Confidence 5555544443211 222 223333222211 11 45555555543 36888886543
No 396
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=66.77 E-value=39 Score=29.98 Aligned_cols=109 Identities=8% Similarity=-0.057 Sum_probs=59.7
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|..|| +.-|.||...+++..+ ...+|+.+|.+..++ +.+.+.. . .+..++.++..|...
T Consensus 8 ~k~~l-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 8 EAVAV-VTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQ-R--FPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp TCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-H--STTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-h--cCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 43444 5556778888887654 336899999998887 4444431 0 122246677777543
Q ss_pred ----eecccCCCCCccCCcc-ccchHHHHhhh--hHH---HHHHHHHhhccC--CcEEEEEe
Q psy7769 230 ----VYSTCSLSPIQNDGVV-HMSLKRIWEET--GCE---IEIKHALKLVKV--GGSVVYST 279 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~Lkp--GG~lVYsT 279 (355)
+|.-....|+.....+ ..+.+...... ++. .+++.+++.++. +|+||+.+
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~is 145 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVN 145 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEE
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEEC
Confidence 5555544553222222 22333332221 122 667777776644 57888754
No 397
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=66.73 E-value=41 Score=29.11 Aligned_cols=110 Identities=11% Similarity=0.111 Sum_probs=58.9
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc--ee-----------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG--SV----------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da--~~----------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.++.+..++ +.+.++ . .+..++.++..|. ..
T Consensus 14 ~k~vl-ITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~~~~~~~~~~d~d~~~~~~~~~~~~~~ 88 (247)
T 3i1j_A 14 GRVIL-VTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIK--S--AGQPQPLIIALNLENATAQQYRELAARV 88 (247)
T ss_dssp TCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHH--h--cCCCCceEEEeccccCCHHHHHHHHHHH
Confidence 44555 5556788888888654 336899999998888 555554 2 1222344444443 21
Q ss_pred ------eecccCCCCCccCCc-c-ccchHHHHhhhh--HH---HHHHHHHhhcc--CCcEEEEEeCC
Q psy7769 230 ------VYSTCSLSPIQNDGV-V-HMSLKRIWEETG--CE---IEIKHALKLVK--VGGSVVYSTCS 281 (355)
Q Consensus 230 ------lDaPCSgsG~t~~~~-l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lk--pGG~lVYsTCS 281 (355)
+|.-....|+..... + ..+.+....... +. .+++.+++.++ .+|++|+.+.+
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~ 155 (247)
T 3i1j_A 89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSS 155 (247)
T ss_dssp HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCG
T ss_pred HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcch
Confidence 455544444322211 2 123333332221 11 56677776664 35788886543
No 398
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=66.72 E-value=34 Score=29.98 Aligned_cols=108 Identities=12% Similarity=0.051 Sum_probs=57.5
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|++++.+..++ +.+.+. . .+ .++.++..|...
T Consensus 7 ~k~~l-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~--~--~~-~~~~~~~~Dv~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 7 GKVAL-ITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELT--A--AG-AKVHVLELDVADRQGVDAAVASTVE 80 (247)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--h--cC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 44555 4456788888887643 236899999998877 544444 1 12 245666666532
Q ss_pred ----eecccCCCCCccCCcc-ccchHHHHhhh--hHH---HHHHHHHhhc-cCCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGVV-HMSLKRIWEET--GCE---IEIKHALKLV-KVGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~L-kpGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+...... ++. .+++.+.+.+ +.||+||+.+.
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS 142 (247)
T 2jah_A 81 ALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSS 142 (247)
T ss_dssp HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 4554444443222221 12333222221 111 5566666655 34588888643
No 399
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=65.91 E-value=26 Score=31.43 Aligned_cols=108 Identities=10% Similarity=0.014 Sum_probs=58.0
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|..|| +.-|.||...+++..+ ...+|++++.+..++ +...+. . .+ .++.++..|...
T Consensus 28 ~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 28 KQVAI-VTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK--Q--AG-LEGRGAVLNVNDATAVDALVESTLK 101 (270)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH--H--HT-CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CcEEEEEEeCCCHHHHHHHHHHHHH
Confidence 44455 5667788888888653 336899999998877 544444 1 11 124455555432
Q ss_pred ----eecccCCCCCccCCc-cccchHHHHhhhh--HH---HHHHHHHhhc--cCCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGV-VHMSLKRIWEETG--CE---IEIKHALKLV--KVGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~L--kpGG~lVYsTC 280 (355)
+|.-....|+..... ...+.+....... +. .+++.+++.+ +.+|+||+.+.
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS 164 (270)
T 3ftp_A 102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITS 164 (270)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECc
Confidence 555554455332222 1223333322211 11 4555555544 35688888654
No 400
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=65.86 E-value=17 Score=34.01 Aligned_cols=42 Identities=17% Similarity=-0.162 Sum_probs=29.1
Q ss_pred hhCCCCC--CeEeeecccCcchHHHHHHhc--CCC-cEEEEcCCchhh
Q psy7769 161 ALNIRPY--DTVLDMCAAPGGKTLVALQTL--YPD-YYCMDGASLLPV 203 (355)
Q Consensus 161 ~L~~~pG--~~VLD~CAgPGgKT~~la~~~--~~g-~V~AvD~s~~Rl 203 (355)
..++++| ++||-.+| .|+....+++.. ... +|+++|.++.++
T Consensus 153 ~~~~~~g~~~~vlI~Ga-sggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~ 199 (357)
T 2zb4_A 153 KGHITAGSNKTMVVSGA-AGACGSVAGQIGHFLGCSRVVGICGTHEKC 199 (357)
T ss_dssp HSCCCTTSCCEEEESST-TBHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred hcCCCCCCccEEEEECC-CcHHHHHHHHHHHHCCCCeEEEEeCCHHHH
Confidence 3468899 99998776 355555444332 234 899999998887
No 401
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=65.80 E-value=37 Score=30.46 Aligned_cols=108 Identities=11% Similarity=-0.001 Sum_probs=58.9
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|++++.+..++ +.+.+. . .+ .++.++..|...
T Consensus 24 ~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (279)
T 3sju_A 24 PQTAF-VTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLR--A--AG-HDVDGSSCDVTSTDEVHAAVAAAVE 97 (279)
T ss_dssp -CEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--T--TT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 44555 4556777888887643 336899999998887 555554 2 12 346677777543
Q ss_pred ----eecccCCCCCccCCc-cccchHHHHhhhh--HH---HHHHHHHh---hc-cCCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGV-VHMSLKRIWEETG--CE---IEIKHALK---LV-KVGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~-l~~~~~~l~~l~~--lQ---~lL~~A~~---~L-kpGG~lVYsTC 280 (355)
+|.-....|+..... ...+.+....... +. .+++.+++ +. +.+|+||+.+.
T Consensus 98 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS 162 (279)
T 3sju_A 98 RFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIAS 162 (279)
T ss_dssp HHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECC
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECC
Confidence 565555555333232 2233333332211 11 55566655 22 23478887643
No 402
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=65.60 E-value=32 Score=31.72 Aligned_cols=109 Identities=11% Similarity=0.010 Sum_probs=60.2
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||.+.+++..+ ...+|++++.+..++ +...+. .. ....++.++..|...
T Consensus 8 ~k~vl-VTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~--~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 8 GRTAF-VTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLE--AE-GSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp TCEEE-EETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--HH-TCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH--hc-CCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 44565 4556688898888654 336899999999887 545444 10 111256777777543
Q ss_pred ----eecccCCCCCccCCccc-cchHHHHhhhh--HH---HHHHHHHhhcc--------CCcEEEEEe
Q psy7769 230 ----VYSTCSLSPIQNDGVVH-MSLKRIWEETG--CE---IEIKHALKLVK--------VGGSVVYST 279 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l~-~~~~~l~~l~~--lQ---~lL~~A~~~Lk--------pGG~lVYsT 279 (355)
+|.-....|+.....+. .+.+....... +. .+++.++..++ .+|+||+.+
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~is 151 (319)
T 3ioy_A 84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTA 151 (319)
T ss_dssp HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEEC
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEec
Confidence 56655555532222221 23333322221 11 55666666553 378888854
No 403
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=65.54 E-value=37 Score=30.08 Aligned_cols=109 Identities=11% Similarity=0.052 Sum_probs=58.9
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEE-cCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMD-GASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~Av-D~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.+ +.+.... +...++ . .+ .++.++..|...
T Consensus 8 ~k~vl-VTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 8 NRTIV-VAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE--K--LG-RSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHH--T--TT-SCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH--h--cC-CceEEEEcCCCCHHHHHHHHHHHH
Confidence 44555 4556677788777643 23577777 6666655 444444 2 12 234566666532
Q ss_pred -----eecccCCCCCc-cCCcc-ccchHHHHhhh--hHH---HHHHHHHhhccCCcEEEEEeCC
Q psy7769 230 -----VYSTCSLSPIQ-NDGVV-HMSLKRIWEET--GCE---IEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 230 -----lDaPCSgsG~t-~~~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~LkpGG~lVYsTCS 281 (355)
+|.-....|+. ....+ ..+.+...... ++. .+++.+++.++.+|+||+.+..
T Consensus 82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~ 145 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQ 145 (259)
T ss_dssp HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCH
Confidence 55554444432 12222 23333322221 122 6788888888888999886543
No 404
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=65.46 E-value=7.3 Score=36.70 Aligned_cols=41 Identities=10% Similarity=-0.139 Sum_probs=30.6
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
+++++|++||-.+||+ |..++++|...+ .+|+++|.++.++
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~~~~~~~ 216 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG-AETYVISRSSRKR 216 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSSTTH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHH
Confidence 4688999999999844 334445555443 5899999999888
No 405
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=65.38 E-value=38 Score=29.67 Aligned_cols=102 Identities=8% Similarity=-0.045 Sum_probs=54.3
Q ss_pred eEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee---------------
Q psy7769 169 TVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV--------------- 229 (355)
Q Consensus 169 ~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~--------------- 229 (355)
+|| +.-|.||...+++..+ ...+|+++|.+..++ +...+. ++.++..|...
T Consensus 4 ~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~Dv~~~~~v~~~~~~~~~~~ 73 (247)
T 3dii_A 4 GVI-VTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERP---------NLFYFHGDVADPLTLKKFVEYAMEKL 73 (247)
T ss_dssp EEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCT---------TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred EEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc---------cCCeEEeeCCCHHHHHHHHHHHHHHc
Confidence 344 4556788888888653 336899999998777 333332 23455555432
Q ss_pred --eecccCCCCCccCCcc-ccchHHHHhhhh--HH---HHHHHHHhhcc-CCcEEEEEeC
Q psy7769 230 --VYSTCSLSPIQNDGVV-HMSLKRIWEETG--CE---IEIKHALKLVK-VGGSVVYSTC 280 (355)
Q Consensus 230 --lDaPCSgsG~t~~~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lk-pGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+....... +. .+++.+.+.++ .+|+||+.+.
T Consensus 74 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS 133 (247)
T 3dii_A 74 QRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIAS 133 (247)
T ss_dssp SCCCEEEECCC-CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEcc
Confidence 5555544453322222 223333222211 11 55666666543 3789888643
No 406
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=65.32 E-value=3.4 Score=40.57 Aligned_cols=42 Identities=10% Similarity=-0.051 Sum_probs=32.1
Q ss_pred CeEeeecccCcchHHHHHHhcCC-Cc----EEEEcCCchhh--HHhhcc
Q psy7769 168 DTVLDMCAAPGGKTLVALQTLYP-DY----YCMDGASLLPV--LALNIR 209 (355)
Q Consensus 168 ~~VLD~CAgPGgKT~~la~~~~~-g~----V~AvD~s~~Rl--l~~~l~ 209 (355)
-+|||+|||.||.+..+-+.+.+ .. |.|+|+++... .+.|..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 48999999999998887765411 23 89999999888 555553
No 407
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=65.24 E-value=47 Score=29.15 Aligned_cols=105 Identities=14% Similarity=0.015 Sum_probs=56.5
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+++|.+..++ +.+.+. . ++.++..|...
T Consensus 9 gk~~l-VTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~------~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (248)
T 3op4_A 9 GKVAL-VTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG--D------NGKGMALNVTNPESIEAVLKAITD 79 (248)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--G------GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--c------cceEEEEeCCCHHHHHHHHHHHHH
Confidence 44555 4556778888887654 336899999998877 444433 1 23445555432
Q ss_pred ----eecccCCCCCccCCc-cccchHHHHhhhh--HH---HHHHHHHhhc--cCCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGV-VHMSLKRIWEETG--CE---IEIKHALKLV--KVGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~L--kpGG~lVYsTC 280 (355)
+|.-....|+..... ...+.+....... +. .+++.+++.+ +.+|+||+.+.
T Consensus 80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS 142 (248)
T 3op4_A 80 EFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGS 142 (248)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 555544445333322 2233333332221 11 5566666654 34688888643
No 408
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=65.14 E-value=32 Score=30.82 Aligned_cols=109 Identities=9% Similarity=-0.039 Sum_probs=58.7
Q ss_pred CCeEeeecccCcchHHHHHHhc-C-CCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL-Y-PDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~-~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ . ..+|+.++.+..++ +...+.. . .+ .++.++..|...
T Consensus 27 ~k~~l-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~--~~-~~~~~~~~Dv~~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 27 DKVAF-ITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG-A--TG-RRCLPLSMDVRAPPAVMAAVDQALK 101 (277)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-H--HS-SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-h--cC-CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 44555 4556788888888754 2 35799999998877 3333321 1 11 246667767543
Q ss_pred ----eecccCCCCCccCCc-cccchHHHHhhhh--HH---HHHHHHHhhc--cCCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGV-VHMSLKRIWEETG--CE---IEIKHALKLV--KVGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~L--kpGG~lVYsTC 280 (355)
+|.-....|+..... ...+.+....... +. .+++.++..+ +.+|+||+.+.
T Consensus 102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS 164 (277)
T 4fc7_A 102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITA 164 (277)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC
T ss_pred HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECc
Confidence 555554445322222 2233333332222 11 5556666554 34688888654
No 409
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=64.61 E-value=37 Score=30.28 Aligned_cols=108 Identities=6% Similarity=-0.016 Sum_probs=56.7
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcC-------------Cchhh--HHhhccccccccCcceEEEEEeccee
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGA-------------SLLPV--LALNIRPYDTVLDIHALKLVKVGGSV 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~-------------s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~ 229 (355)
|..|| +.-|.||...+++..+ ...+|+++|. +...+ +.+.+. . .+ ..+.++..|...
T Consensus 11 ~k~~l-VTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~~ 84 (277)
T 3tsc_A 11 GRVAF-ITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE--A--AN-RRIVAAVVDTRD 84 (277)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHH--H--TT-CCEEEEECCTTC
T ss_pred CCEEE-EECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHH--h--cC-CeEEEEECCCCC
Confidence 44555 5556777888877643 3368999988 44444 333333 1 11 345666666543
Q ss_pred -----------------eecccCCCCCccCCcc-ccchHHHHhhhhH--H---HHHHHHHhhccC---CcEEEEEeC
Q psy7769 230 -----------------VYSTCSLSPIQNDGVV-HMSLKRIWEETGC--E---IEIKHALKLVKV---GGSVVYSTC 280 (355)
Q Consensus 230 -----------------lDaPCSgsG~t~~~~l-~~~~~~l~~l~~l--Q---~lL~~A~~~Lkp---GG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+........ . .+++.++..++. +|+||+.+.
T Consensus 85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS 161 (277)
T 3tsc_A 85 FDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS 161 (277)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence 5655555554332222 2333333322211 1 456666665532 678888654
No 410
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=64.59 E-value=53 Score=29.01 Aligned_cols=107 Identities=15% Similarity=0.055 Sum_probs=57.6
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEE-cCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMD-GASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~Av-D~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.+ +.+..++ +.+.++ . .+ .++.++..|...
T Consensus 4 ~k~vl-VTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (258)
T 3oid_A 4 NKCAL-VTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE--K--LG-VKVLVVKANVGQPAKIKEMFQQID 77 (258)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--T--TT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH--h--cC-CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 44455 5556788888888654 23567775 7887776 545454 2 12 346677777543
Q ss_pred -----eecccCCCCCccCCc-cccchHHHHhhhh--HH---HHHHHHHhhccC--CcEEEEEe
Q psy7769 230 -----VYSTCSLSPIQNDGV-VHMSLKRIWEETG--CE---IEIKHALKLVKV--GGSVVYST 279 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~Lkp--GG~lVYsT 279 (355)
+|.-....|+..... ...+.+....... +. .+++.+++.++. +|+||+.+
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~is 140 (258)
T 3oid_A 78 ETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSIS 140 (258)
T ss_dssp HHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence 455554445322222 2233333222211 11 566666666544 57888753
No 411
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=64.20 E-value=28 Score=31.24 Aligned_cols=108 Identities=15% Similarity=0.051 Sum_probs=59.6
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.+|.+..++ +.+.++ . .+ .++.++..|...
T Consensus 26 gk~~l-VTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 26 GRTAL-VTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFR--N--VG-HDAEAVAFDVTSESEIIEAFARLDE 99 (271)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHH--H--TT-CCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 44555 5556788888888654 336899999998887 444444 1 12 245666666532
Q ss_pred ----eecccCCCCCccCCcc-ccchHHHHhhhh--HH---HHHHHHHhhcc--CCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGVV-HMSLKRIWEETG--CE---IEIKHALKLVK--VGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lk--pGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+....... +. .+.+.+++.++ .+|+||+.+.
T Consensus 100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS 162 (271)
T 4ibo_A 100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGS 162 (271)
T ss_dssp HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 5655555554333322 233333322221 11 55566666553 3578888543
No 412
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=63.95 E-value=42 Score=29.20 Aligned_cols=108 Identities=11% Similarity=0.002 Sum_probs=58.5
Q ss_pred CCeEeeecccCcchHHHHHHhc-C--CCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL-Y--PDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~-~--~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|.+|| +.-|.|+.+.+++..+ . ..+|++++.+..++ +.+.+. . .+ .++.++..|...
T Consensus 4 ~k~vl-ITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~--~--~~-~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (276)
T 1wma_A 4 IHVAL-VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQ--A--EG-LSPRFHQLDIDDLQSIRALRDFLR 77 (276)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHH--H--TT-CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHH--h--cC-CeeEEEECCCCCHHHHHHHHHHHH
Confidence 44555 5667888888888643 2 36799999988776 444443 1 11 234555556432
Q ss_pred -----eecccCCCCCccCCccccc-hHHHHhh--hhHH---HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQNDGVVHMS-LKRIWEE--TGCE---IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l~~~-~~~l~~l--~~lQ---~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+......... .+..... .++. .+++.+.+.++++|+|||.+.
T Consensus 78 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 78 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 4443333332111111001 1222111 1122 678888888887889998754
No 413
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=63.75 E-value=44 Score=29.87 Aligned_cols=108 Identities=13% Similarity=0.044 Sum_probs=57.2
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCC----------------chhh--HHhhccccccccCcceEEEEEec
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGAS----------------LLPV--LALNIRPYDTVLDIHALKLVKVG 226 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s----------------~~Rl--l~~~l~r~~~~~g~~~v~~~~~D 226 (355)
|..|| +.-|.||...+++..+ ...+|+++|.+ ..++ +.+.+. . .+ .++.++..|
T Consensus 11 ~k~~l-VTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~D 84 (286)
T 3uve_A 11 GKVAF-VTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK--G--HN-RRIVTAEVD 84 (286)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHH--T--TT-CCEEEEECC
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHh--h--cC-CceEEEEcC
Confidence 44455 5556677888887654 34689999887 3444 333333 1 12 346677777
Q ss_pred cee-----------------eecccCCCCCccCCc-c-ccchHHHHhhhh--HH---HHHHHHHhhcc---CCcEEEEEe
Q psy7769 227 GSV-----------------VYSTCSLSPIQNDGV-V-HMSLKRIWEETG--CE---IEIKHALKLVK---VGGSVVYST 279 (355)
Q Consensus 227 a~~-----------------lDaPCSgsG~t~~~~-l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lk---pGG~lVYsT 279 (355)
... +|.-....|+..... + ..+.+....... +. .+++.++..++ .+|+||+.+
T Consensus 85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is 164 (286)
T 3uve_A 85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS 164 (286)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence 543 555554555322222 2 123333322221 11 56666666653 368888865
Q ss_pred C
Q psy7769 280 C 280 (355)
Q Consensus 280 C 280 (355)
.
T Consensus 165 S 165 (286)
T 3uve_A 165 S 165 (286)
T ss_dssp C
T ss_pred c
Confidence 4
No 414
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=63.74 E-value=45 Score=30.00 Aligned_cols=105 Identities=14% Similarity=0.055 Sum_probs=56.2
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+++|.+..++ +.+.+. .++.++..|...
T Consensus 29 gk~vl-VTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 29 GKVAI-VTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG--------CGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp TCEEE-ETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--------SSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--------CcceEEEecCCCHHHHHHHHHHHHH
Confidence 44555 5556778888887643 336899999998877 333332 123455555432
Q ss_pred ----eecccCCCCCccCCc-cccchHHHHhhh--hHH---HHHHHHHhhc--cCCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGV-VHMSLKRIWEET--GCE---IEIKHALKLV--KVGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~-l~~~~~~l~~l~--~lQ---~lL~~A~~~L--kpGG~lVYsTC 280 (355)
+|.-....|+..... ...+.+...... ++. .+++.+++.+ +.+|+||+.+.
T Consensus 100 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS 162 (277)
T 3gvc_A 100 AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSS 162 (277)
T ss_dssp HHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 455444444322222 122333333221 111 5566666655 45688887543
No 415
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=63.50 E-value=42 Score=30.12 Aligned_cols=109 Identities=13% Similarity=-0.008 Sum_probs=59.1
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
.|..|| +.-|.||...+++..+ ...+|+.+|.+..++ +...+. . .+ .++.++..|...
T Consensus 32 ~gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 32 RGRTAL-VTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRII--A--SG-GTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp TTCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHH--H--TT-CCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH--h--cC-CeEEEEEecCCCHHHHHHHHHHHH
Confidence 354555 5556788888888654 336899999998887 555444 1 12 345666666532
Q ss_pred ----eecccCCCCCccCCcc-ccchHHHHhhhh--HH---HHHHHHHhhc--cCCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGVV-HMSLKRIWEETG--CE---IEIKHALKLV--KVGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~L--kpGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+....... +. .+++.++..+ +.+|+||+.+.
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS 168 (275)
T 4imr_A 106 AIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGS 168 (275)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECC
Confidence 3444433443222221 233333322211 11 5666666655 34688887643
No 416
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=63.45 E-value=37 Score=29.26 Aligned_cols=55 Identities=11% Similarity=0.051 Sum_probs=34.0
Q ss_pred eEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 169 TVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 169 ~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
+|| +.-|.||...++++.+ ...+|+.++.+..++ +.+.+.. . .+ .++.++..|..
T Consensus 4 ~vl-ITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~--~~-~~~~~~~~D~~ 62 (235)
T 3l77_A 4 VAV-ITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ-E--QG-VEVFYHHLDVS 62 (235)
T ss_dssp EEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-H--HC-CCEEEEECCTT
T ss_pred EEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-h--cC-CeEEEEEeccC
Confidence 344 4556788888888654 336799999998887 4444320 1 11 24566666654
No 417
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=63.37 E-value=32 Score=30.97 Aligned_cols=57 Identities=11% Similarity=0.084 Sum_probs=34.1
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcC-Cchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGA-SLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~-s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
.|..|| +.-|.||...+++..+ ...+|+.+|. +..++ +...+. . .+ .++.++..|..
T Consensus 28 ~~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~ 89 (280)
T 4da9_A 28 ARPVAI-VTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELS--G--LG-ARVIFLRADLA 89 (280)
T ss_dssp CCCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH--H--TT-CCEEEEECCTT
T ss_pred CCCEEE-EecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHH--h--cC-CcEEEEEecCC
Confidence 454555 5556778888887653 3368999986 55555 444444 1 12 34667776754
No 418
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=63.01 E-value=37 Score=30.74 Aligned_cols=108 Identities=10% Similarity=0.020 Sum_probs=58.5
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCch--hh--HHhhccccccccCcceEEEEEeccee-----------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLL--PV--LALNIRPYDTVLDIHALKLVKVGGSV----------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~--Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~----------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.++.+.. .. +...++ . .+ .++.++..|...
T Consensus 49 ~k~vl-VTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 49 DRKAL-VTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIE--E--CG-RKAVLLPGDLSDESFARSLVHKA 122 (294)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHH--H--TT-CCEEECCCCTTSHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHH--H--cC-CcEEEEEecCCCHHHHHHHHHHH
Confidence 44555 4556778888888654 2367888888733 22 333333 1 12 245555556432
Q ss_pred ------eecccCCCCCccC-Ccc-ccchHHHHhhhh--HH---HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 ------VYSTCSLSPIQND-GVV-HMSLKRIWEETG--CE---IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 ------lDaPCSgsG~t~~-~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+... ..+ ..+.+....... +. .+++.++..++.+|+||+.+.
T Consensus 123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 4555444443221 112 123333322221 11 778888899999999998654
No 419
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=62.92 E-value=13 Score=34.97 Aligned_cols=40 Identities=15% Similarity=0.022 Sum_probs=28.5
Q ss_pred hCCCCCCeEeeecccCcchHHH---HHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLV---ALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~---la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+| .|+.... ++... ..+|++++.++.++
T Consensus 166 ~~~~~g~~vlV~Ga-sggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~ 208 (351)
T 1yb5_A 166 ACVKAGESVLVHGA-SGGVGLAACQIARAY-GLKILGTAGTEEGQ 208 (351)
T ss_dssp SCCCTTCEEEEETC-SSHHHHHHHHHHHHT-TCEEEEEESSHHHH
T ss_pred hCCCCcCEEEEECC-CChHHHHHHHHHHHC-CCEEEEEeCChhHH
Confidence 46789999998876 3444444 44333 36899999999888
No 420
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=62.87 E-value=68 Score=28.09 Aligned_cols=107 Identities=11% Similarity=0.108 Sum_probs=57.6
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.|+.+.+++..+ ...+|++++.+..+. +.+.+. . . .++.++..|...
T Consensus 16 ~k~vl-ITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~---~-~~~~~~~~D~~~~~~~~~~~~~~~~ 88 (278)
T 2bgk_A 16 DKVAI-ITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG--S---P-DVISFVHCDVTKDEDVRNLVDTTIA 88 (278)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--C---T-TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhC--C---C-CceEEEECCCCCHHHHHHHHHHHHH
Confidence 55666 5556788888888643 336899999887766 433333 1 1 145666666532
Q ss_pred ----eecccCCCCCccC--Ccc-ccchHHHHhhh--hHH---HHHHHHHhhccC--CcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQND--GVV-HMSLKRIWEET--GCE---IEIKHALKLVKV--GGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~--~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~Lkp--GG~lVYsTC 280 (355)
+|.-....|+... ..+ ..+.+...... ++. .+++.+.+.++. +|++|+.+.
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS 153 (278)
T 2bgk_A 89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTAS 153 (278)
T ss_dssp HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECC
T ss_pred HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEee
Confidence 4555444443211 111 12223222221 112 566667666543 578888654
No 421
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=62.33 E-value=50 Score=29.36 Aligned_cols=106 Identities=13% Similarity=0.102 Sum_probs=56.2
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|++++.+..++ +.+.+. .++.++..|...
T Consensus 6 ~k~vl-ITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (263)
T 2a4k_A 6 GKTIL-VTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--------AEAIAVVADVSDPKAVEAVFAEALE 76 (263)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--------SSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--------CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 44555 5556788888888654 336899999998777 333332 234556666432
Q ss_pred ----eecccCCCCCccCCcc-ccchHHHHhh--hhHH---HHHHHHHhhccCCcEEEEEeCC
Q psy7769 230 ----VYSTCSLSPIQNDGVV-HMSLKRIWEE--TGCE---IEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~l-~~~~~~l~~l--~~lQ---~lL~~A~~~LkpGG~lVYsTCS 281 (355)
+|.-....|+.....+ ..+.+..... .++. .+++.+.+.++.+|+||+.+..
T Consensus 77 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 138 (263)
T 2a4k_A 77 EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV 138 (263)
T ss_dssp HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 3444333332211111 1222222221 1222 5667777766557898886543
No 422
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=62.08 E-value=71 Score=28.00 Aligned_cols=56 Identities=11% Similarity=-0.049 Sum_probs=35.1
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +.-|.||...+++..+ ...+|++++.++.++ +.+.+. . .+ .++.++..|..
T Consensus 9 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~ 68 (260)
T 2ae2_A 9 GCTAL-VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR--S--KG-FKVEASVCDLS 68 (260)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TT-CEEEEEECCTT
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CcEEEEEcCCC
Confidence 45566 5556788888887643 336899999998877 444443 1 12 24566666643
No 423
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=62.08 E-value=14 Score=34.41 Aligned_cols=36 Identities=11% Similarity=-0.035 Sum_probs=25.2
Q ss_pred CCCeEeeecccCcchH---HHHHHhcCCCcEEEEcCCchhh
Q psy7769 166 PYDTVLDMCAAPGGKT---LVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT---~~la~~~~~g~V~AvD~s~~Rl 203 (355)
+|++||=.+ |.|+.. +++|...+ .+|++++.++.++
T Consensus 150 ~g~~VlV~g-g~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~ 188 (346)
T 3fbg_A 150 EGKTLLIIN-GAGGVGSIATQIAKAYG-LRVITTASRNETI 188 (346)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTT-CEEEEECCSHHHH
T ss_pred CCCEEEEEc-CCCHHHHHHHHHHHHcC-CEEEEEeCCHHHH
Confidence 899998663 334444 44555443 6999999999988
No 424
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=61.79 E-value=44 Score=29.29 Aligned_cols=51 Identities=18% Similarity=-0.016 Sum_probs=31.9
Q ss_pred ecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 173 MCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 173 ~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
+.-|.||...+++..+ ...+|++++.+..++ +.+.+. . .+ .++.++..|..
T Consensus 7 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~ 61 (256)
T 1geg_A 7 VTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN--Q--AG-GHAVAVKVDVS 61 (256)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TT-CCEEEEECCTT
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CcEEEEEecCC
Confidence 4556788888887643 236899999998777 444443 1 12 23556666643
No 425
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=61.77 E-value=8.9 Score=37.29 Aligned_cols=40 Identities=18% Similarity=-0.020 Sum_probs=28.3
Q ss_pred hCCCCCCeEeeecccCcchHH---HHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTL---VALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~---~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||=.+| .|+... ++|... ..+|++++.++.++
T Consensus 216 ~~~~~g~~VlV~Ga-sG~iG~~a~qla~~~-Ga~vi~~~~~~~~~ 258 (447)
T 4a0s_A 216 AQMKQGDIVLIWGA-SGGLGSYAIQFVKNG-GGIPVAVVSSAQKE 258 (447)
T ss_dssp TCCCTTCEEEETTT-TSHHHHHHHHHHHHT-TCEEEEEESSHHHH
T ss_pred cCCCCCCEEEEECC-CCHHHHHHHHHHHHc-CCEEEEEeCCHHHH
Confidence 46789999997665 344444 444443 36899999999888
No 426
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=61.50 E-value=5.1 Score=43.92 Aligned_cols=43 Identities=19% Similarity=-0.039 Sum_probs=33.3
Q ss_pred CCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcc
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
.-+++|++||.||.+..+.+.+-.-.|.|+|+++... .+.|..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p 584 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP 584 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC
Confidence 4489999999999998887664112588999999988 666653
No 427
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=61.32 E-value=55 Score=29.03 Aligned_cols=56 Identities=14% Similarity=0.064 Sum_probs=36.0
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +..|.|+.+.+++..+ ...+|+++|.+..++ +.+.++ . .+ .++.++..|..
T Consensus 31 ~k~vl-ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~--~--~~-~~~~~~~~Dl~ 90 (272)
T 1yb1_A 31 GEIVL-ITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCK--G--LG-AKVHTFVVDCS 90 (272)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TT-CCEEEEECCTT
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHH--h--cC-CeEEEEEeeCC
Confidence 44555 5556788888888643 336899999998877 544444 2 12 24666666654
No 428
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=61.27 E-value=15 Score=35.97 Aligned_cols=41 Identities=15% Similarity=-0.121 Sum_probs=28.7
Q ss_pred hCCCCCCeEeeecc-c-CcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCA-A-PGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CA-g-PGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||=.+| | -|..++++|... ..+|++++.++.++
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~ 266 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKA 266 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHH
Confidence 46789999997765 2 233344555544 36899999999888
No 429
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=61.12 E-value=47 Score=28.89 Aligned_cols=102 Identities=12% Similarity=0.037 Sum_probs=54.1
Q ss_pred eEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee---------------
Q psy7769 169 TVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV--------------- 229 (355)
Q Consensus 169 ~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~--------------- 229 (355)
+|| +.-|.||...+++..+ ...+|++++.+..++ +.+.+. .++.++..|...
T Consensus 5 ~vl-VTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 5 HII-VTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG--------NAVIGIVADLAHHEDVDVAFAAAVEWG 75 (235)
T ss_dssp EEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------GGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred EEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--------CCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 444 4556788888887643 336899999998887 443333 125566666532
Q ss_pred --eecccCCCCCccCCc-cccchHHHHhhhh--HH---HHHHHHHhhcc-CCcEEEEEe
Q psy7769 230 --VYSTCSLSPIQNDGV-VHMSLKRIWEETG--CE---IEIKHALKLVK-VGGSVVYST 279 (355)
Q Consensus 230 --lDaPCSgsG~t~~~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~Lk-pGG~lVYsT 279 (355)
+|.-.-..|+..... ...+.+....... +. .+++.++..++ .||+||+.+
T Consensus 76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~is 134 (235)
T 3l6e_A 76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVL 134 (235)
T ss_dssp CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 444443334322222 1233333332221 11 56677777664 456777654
No 430
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=61.09 E-value=13 Score=34.64 Aligned_cols=38 Identities=5% Similarity=-0.175 Sum_probs=26.6
Q ss_pred CCCCeEeeecccCcchHHHHHH---hcCCCcEEEEcCCchhh
Q psy7769 165 RPYDTVLDMCAAPGGKTLVALQ---TLYPDYYCMDGASLLPV 203 (355)
Q Consensus 165 ~pG~~VLD~CAgPGgKT~~la~---~~~~g~V~AvD~s~~Rl 203 (355)
++|+.++=+.+|.|+....+++ ..+ .+|+++|.++.++
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~~~~~~ 202 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEG-FRPIVTVRRDEQI 202 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESCGGGH
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHH
Confidence 5675555566677777665444 333 6999999999988
No 431
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=61.04 E-value=19 Score=33.20 Aligned_cols=40 Identities=20% Similarity=0.107 Sum_probs=28.0
Q ss_pred hCCCCCCeEeeecccCcchHHH---HHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLV---ALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~---la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+| .|+.... ++... ..+|+++|.++.++
T Consensus 141 ~~~~~g~~vlV~Ga-~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~ 183 (333)
T 1wly_A 141 HKVKPGDYVLIHAA-AGGMGHIMVPWARHL-GATVIGTVSTEEKA 183 (333)
T ss_dssp SCCCTTCEEEETTT-TSTTHHHHHHHHHHT-TCEEEEEESSHHHH
T ss_pred hCCCCCCEEEEECC-ccHHHHHHHHHHHHC-CCEEEEEeCCHHHH
Confidence 36789999997764 3444444 34333 36899999999887
No 432
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=60.81 E-value=16 Score=34.33 Aligned_cols=40 Identities=10% Similarity=-0.038 Sum_probs=27.9
Q ss_pred hCCCCCCeEeeecccCcchHH---HHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTL---VALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~---~la~~~~~g~V~AvD~s~~Rl 203 (355)
..+++|++||=.+ |.|+... ++|... ..+|+++|.++.++
T Consensus 163 ~~~~~g~~VlV~G-g~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~ 205 (353)
T 4dup_A 163 AGLTEGESVLIHG-GTSGIGTTAIQLARAF-GAEVYATAGSTGKC 205 (353)
T ss_dssp TCCCTTCEEEESS-TTSHHHHHHHHHHHHT-TCEEEEEESSHHHH
T ss_pred cCCCCCCEEEEEc-CCCHHHHHHHHHHHHc-CCEEEEEeCCHHHH
Confidence 3578999999663 3444444 444443 36899999999998
No 433
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=60.74 E-value=56 Score=29.94 Aligned_cols=33 Identities=9% Similarity=-0.058 Sum_probs=22.4
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCC
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGAS 199 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s 199 (355)
.|.+|| +.-|.||...+++..+ ...+|+++|.+
T Consensus 45 ~gk~~l-VTGas~GIG~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 45 QGKVAF-ITGAARGQGRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp TTCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCCCeEEEEecc
Confidence 354555 5566788888887654 33689999876
No 434
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=60.31 E-value=52 Score=28.61 Aligned_cols=56 Identities=14% Similarity=0.008 Sum_probs=36.6
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +.-|.||...+++..+ ...+|+++|.+...+ +.+.+. . .+ .++.++..|..
T Consensus 9 ~k~vl-ITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~ 68 (253)
T 3qiv_A 9 NKVGI-VTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIV--A--DG-GTAISVAVDVS 68 (253)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TT-CEEEEEECCTT
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH--h--cC-CcEEEEEccCC
Confidence 44555 4556788888888654 336899999998887 555554 2 12 34667777754
No 435
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=60.25 E-value=37 Score=30.21 Aligned_cols=109 Identities=11% Similarity=-0.063 Sum_probs=56.5
Q ss_pred CCeEeeeccc-CcchHHHHHHhc-C-CCcEEEEcCCchhh-HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAA-PGGKTLVALQTL-Y-PDYYCMDGASLLPV-LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAg-PGgKT~~la~~~-~-~g~V~AvD~s~~Rl-l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+||=.+++ +||...+++..+ . ..+|++++.+...- ..+.+.. . .+ ++.++..|...
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~-~--~~--~~~~~~~D~~~~~~v~~~~~~~~~ 80 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQ-E--LN--SPYVYELDVSKEEHFKSLYNSVKK 80 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHH-H--TT--CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-h--cC--CcEEEEcCCCCHHHHHHHHHHHHH
Confidence 5567766664 388888888754 2 36799998887511 1111210 0 01 13444445322
Q ss_pred ----eecccCCCCCccC----Ccc-ccchHHHHhhh--hHH---HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQND----GVV-HMSLKRIWEET--GCE---IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~----~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+... ..+ ..+.+...... ++. .+++.+++.++.+|+||+.+.
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (275)
T 2pd4_A 81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY 145 (275)
T ss_dssp HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 4555444443221 121 22333222221 111 677788888877889987654
No 436
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=60.19 E-value=64 Score=28.53 Aligned_cols=109 Identities=15% Similarity=0.040 Sum_probs=58.7
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+++|.+...+ +.+.+.. . .....+.++..|...
T Consensus 10 ~k~~l-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~--~~~~~~~~~~~D~~~~~~~~~~~~~~g~ 85 (267)
T 3t4x_A 10 GKTAL-VTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRA-Q--YPDAILQPVVADLGTEQGCQDVIEKYPK 85 (267)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-H--CTTCEEEEEECCTTSHHHHHHHHHHCCC
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-h--CCCceEEEEecCCCCHHHHHHHHHhcCC
Confidence 44555 5556788888888654 336899999998887 4444431 1 111345566666532
Q ss_pred eecccCCCCCccCCc-cccchHHHHhhhhH--H---HHHHHHHhhc--cCCcEEEEEe
Q psy7769 230 VYSTCSLSPIQNDGV-VHMSLKRIWEETGC--E---IEIKHALKLV--KVGGSVVYST 279 (355)
Q Consensus 230 lDaPCSgsG~t~~~~-l~~~~~~l~~l~~l--Q---~lL~~A~~~L--kpGG~lVYsT 279 (355)
+|.-....|+..... ...+.+...+.... . .+.+.+++.+ +.+|+||+.+
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~is 143 (267)
T 3t4x_A 86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIA 143 (267)
T ss_dssp CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEEC
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEc
Confidence 555555555332222 22233332222211 1 4566666655 3457888754
No 437
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=60.17 E-value=58 Score=28.93 Aligned_cols=109 Identities=11% Similarity=0.034 Sum_probs=57.3
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|..|| +.-|.||...+++..+ ...+|++++.+..++ +.+.+.+ . .+ .++.++..|...
T Consensus 21 ~k~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~--~~-~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 21 GRVAL-VTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE-K--YG-VETMAFRCDVSNYEEVKKLLEAVKE 95 (267)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-H--HC-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-h--cC-CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 44555 5556788888887653 236899999998877 4444410 1 11 235556666432
Q ss_pred ----eecccCCCCCccCCc-cccchHHHHhhh--hHH---HHHHHHHhhccC--CcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQNDGV-VHMSLKRIWEET--GCE---IEIKHALKLVKV--GGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~~~-l~~~~~~l~~l~--~lQ---~lL~~A~~~Lkp--GG~lVYsTC 280 (355)
+|.-....|+..... ...+.+...... ++. .+++.+++.++. +|+||+.+.
T Consensus 96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS 158 (267)
T 1vl8_A 96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS 158 (267)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence 455444444322222 123333332221 122 556666666543 478887543
No 438
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=59.80 E-value=63 Score=29.21 Aligned_cols=32 Identities=13% Similarity=-0.041 Sum_probs=21.7
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCC
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGAS 199 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s 199 (355)
|..|| +.-|.||...+++..+ ...+|+++|.+
T Consensus 28 gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 28 GKVAF-ITGAARGQGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 44555 4556677788877643 33689999887
No 439
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=59.57 E-value=48 Score=29.33 Aligned_cols=59 Identities=7% Similarity=0.004 Sum_probs=34.9
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|..|| +.-|.||...+++..+ ...+|++++.++.++ +.+.+.... ....++.++..|..
T Consensus 6 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~ 68 (278)
T 1spx_A 6 EKVAI-ITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAG--VSEQNVNSVVADVT 68 (278)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCGGGEEEEECCTT
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc--cCCCceeEEecccC
Confidence 44454 4556788888888643 336899999998877 444441000 01134666666653
No 440
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=59.35 E-value=19 Score=33.11 Aligned_cols=40 Identities=23% Similarity=0.234 Sum_probs=28.3
Q ss_pred hCCCCCCeEeeecccCcchHHHHH---HhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLVAL---QTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~la---~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+| .|+....++ ... ..+|+++|.++.++
T Consensus 136 ~~~~~g~~vlV~Ga-~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~ 178 (327)
T 1qor_A 136 YEIKPDEQFLFHAA-AGGVGLIACQWAKAL-GAKLIGTVGTAQKA 178 (327)
T ss_dssp SCCCTTCEEEESST-TBHHHHHHHHHHHHH-TCEEEEEESSHHHH
T ss_pred hCCCCCCEEEEECC-CCHHHHHHHHHHHHc-CCEEEEEeCCHHHH
Confidence 46789999998774 344444444 333 26899999999888
No 441
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=59.14 E-value=53 Score=29.42 Aligned_cols=105 Identities=12% Similarity=0.081 Sum_probs=57.3
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|..|| +.-|.||...+++..+ ...+|+++|.+..++ +.+.+. .++.++..|...
T Consensus 28 ~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~~~~~~ 98 (272)
T 4dyv_A 28 KKIAI-VTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG--------DDALCVPTDVTDPDSVRALFTATVE 98 (272)
T ss_dssp CCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT--------SCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--------CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 44444 6667788888888654 336899999998877 433332 123555555432
Q ss_pred ----eecccCCCCCccC-Ccc-ccchHHHHhhhh--HH---HHHHHHHhhccC----CcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQND-GVV-HMSLKRIWEETG--CE---IEIKHALKLVKV----GGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~-~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lkp----GG~lVYsTC 280 (355)
+|.-....|+... ..+ ..+.+....... +. .+.+.+++.++. +|+||+.+.
T Consensus 99 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS 164 (272)
T 4dyv_A 99 KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGS 164 (272)
T ss_dssp HHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECc
Confidence 5555444453222 122 233333332221 11 556666666643 588888643
No 442
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=58.85 E-value=55 Score=28.37 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=29.6
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhcc
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
++.+|| +.-|.||...+++..+ ...+|++++.+..++ +.+.+.
T Consensus 13 ~~k~vl-VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 59 (249)
T 3f9i_A 13 TGKTSL-ITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK 59 (249)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc
Confidence 455666 5556788888888653 336899999998887 444443
No 443
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=58.34 E-value=5.4 Score=36.98 Aligned_cols=40 Identities=18% Similarity=0.103 Sum_probs=27.8
Q ss_pred CCCCCC-eEeeecc--cCcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 163 NIRPYD-TVLDMCA--APGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 163 ~~~pG~-~VLD~CA--gPGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
++++|+ +||=.+| |-|..++++|...+ .+|++++.++.++
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~ 188 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAA 188 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTH
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHH
Confidence 578886 8988876 22333445555443 6899999998887
No 444
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=58.21 E-value=73 Score=27.27 Aligned_cols=54 Identities=13% Similarity=-0.044 Sum_probs=32.1
Q ss_pred eEeeecccCcchHHHHHHhc--CCCcEEE-EcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 169 TVLDMCAAPGGKTLVALQTL--YPDYYCM-DGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 169 ~VLD~CAgPGgKT~~la~~~--~~g~V~A-vD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
+|| +.-|.|+...++++.+ ...+|++ .+.+...+ +.+.++ . .+ .++.++..|..
T Consensus 3 ~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~ 61 (244)
T 1edo_A 3 VVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIE--A--YG-GQAITFGGDVS 61 (244)
T ss_dssp EEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--H--HT-CEEEEEECCTT
T ss_pred EEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH--h--cC-CcEEEEeCCCC
Confidence 344 5667888888888654 2357877 47777666 444443 1 12 24566666653
No 445
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=57.36 E-value=9.8 Score=34.97 Aligned_cols=40 Identities=10% Similarity=-0.069 Sum_probs=29.7
Q ss_pred hCCCCCCeEeeecccC-cchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAP-GGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgP-GgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||=.+||+ |..++++|...+ .+|++++ ++.++
T Consensus 138 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~-~~~~~ 178 (315)
T 3goh_A 138 IPLTKQREVLIVGFGAVNNLLTQMLNNAG-YVVDLVS-ASLSQ 178 (315)
T ss_dssp SCCCSCCEEEEECCSHHHHHHHHHHHHHT-CEEEEEC-SSCCH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEE-ChhhH
Confidence 3578999999888843 444556666554 5999999 88888
No 446
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=57.26 E-value=8.5 Score=35.47 Aligned_cols=40 Identities=23% Similarity=0.163 Sum_probs=25.6
Q ss_pred CCCCCC-eEeeecc--cCcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 163 NIRPYD-TVLDMCA--APGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 163 ~~~pG~-~VLD~CA--gPGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
++++++ +||=.+| +-|..++++|+..+ .+|++++.++.++
T Consensus 142 ~~~~~~g~VlV~Ga~G~vG~~aiqla~~~G-a~Vi~~~~~~~~~ 184 (324)
T 3nx4_A 142 GIRPQDGEVVVTGASGGVGSTAVALLHKLG-YQVAAVSGRESTH 184 (324)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCGGGH
T ss_pred ccCCCCCeEEEECCCcHHHHHHHHHHHHcC-CEEEEEeCCHHHH
Confidence 355532 4776554 23444455665543 5999999999998
No 447
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=57.16 E-value=74 Score=28.57 Aligned_cols=98 Identities=8% Similarity=-0.042 Sum_probs=54.7
Q ss_pred ecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-----------------ee
Q psy7769 173 MCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV-----------------VY 231 (355)
Q Consensus 173 ~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~-----------------lD 231 (355)
+.-|.+|....+|..+ ...+|+.+|++..++ +.+.. .++..+..|... +|
T Consensus 7 VTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 7 VTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER---------PNLFYFHGDVADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC---------TTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred EecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---------CCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5566777888877654 347899999998877 33222 234556666543 66
Q ss_pred cccCCCCCccCCcc-ccchHHHHhhhhH--H---HHHHHHHhhc-cCCcEEEEEe
Q psy7769 232 STCSLSPIQNDGVV-HMSLKRIWEETGC--E---IEIKHALKLV-KVGGSVVYST 279 (355)
Q Consensus 232 aPCSgsG~t~~~~l-~~~~~~l~~l~~l--Q---~lL~~A~~~L-kpGG~lVYsT 279 (355)
.-....|+.....+ ..+.+...+..+. . .+.+.+.+.+ +.+|.+|..+
T Consensus 78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInis 132 (247)
T 3ged_A 78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIA 132 (247)
T ss_dssp EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEe
Confidence 66655564333332 2333333332221 1 4445555544 4578888643
No 448
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=57.13 E-value=64 Score=28.80 Aligned_cols=36 Identities=8% Similarity=-0.145 Sum_probs=25.4
Q ss_pred CCCeEeeecccC-cchHHHHHHhc--CCCcEEEEcCCch
Q psy7769 166 PYDTVLDMCAAP-GGKTLVALQTL--YPDYYCMDGASLL 201 (355)
Q Consensus 166 pG~~VLD~CAgP-GgKT~~la~~~--~~g~V~AvD~s~~ 201 (355)
.|.+||=.+++. ||...+++..+ ...+|++++.+..
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~ 58 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK 58 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 466777666653 88888887643 3368999998875
No 449
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=56.82 E-value=54 Score=30.02 Aligned_cols=33 Identities=12% Similarity=0.068 Sum_probs=22.8
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCC
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGAS 199 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s 199 (355)
.|.+|| +.-|.||...+++..+ ...+|+++|.+
T Consensus 26 ~gk~vl-VTGas~GIG~aia~~la~~G~~Vv~~~r~ 60 (322)
T 3qlj_A 26 DGRVVI-VTGAGGGIGRAHALAFAAEGARVVVNDIG 60 (322)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCc
Confidence 355555 5556788888888654 33689999887
No 450
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=56.72 E-value=76 Score=27.22 Aligned_cols=54 Identities=11% Similarity=0.087 Sum_probs=34.0
Q ss_pred eEeeecccCcchHHHHHHhc-CC-C-------cEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 169 TVLDMCAAPGGKTLVALQTL-YP-D-------YYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 169 ~VLD~CAgPGgKT~~la~~~-~~-g-------~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
+|| +.-|.|+...+++..+ .. . .|++++.+...+ +...+. . .+ .++.++..|..
T Consensus 4 ~vl-ITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~ 68 (244)
T 2bd0_A 4 ILL-ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR--A--EG-ALTDTITADIS 68 (244)
T ss_dssp EEE-EETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHH--T--TT-CEEEEEECCTT
T ss_pred EEE-EECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHH--c--cC-CeeeEEEecCC
Confidence 344 5567888888887643 22 3 799999998777 544444 1 12 34667777753
No 451
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=56.49 E-value=69 Score=28.69 Aligned_cols=108 Identities=12% Similarity=0.038 Sum_probs=59.7
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchh-------h--HHhhccccccccCcceEEEEEeccee------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLP-------V--LALNIRPYDTVLDIHALKLVKVGGSV------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~R-------l--l~~~l~r~~~~~g~~~v~~~~~Da~~------ 229 (355)
|..|| +.-|.||...+++..+ ...+|++++.+... + +.+.+. . .+ .++.++..|...
T Consensus 9 ~k~vl-VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~~~~~v~~ 82 (285)
T 3sc4_A 9 GKTMF-ISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE--E--AG-GQALPIVGDIRDGDAVAA 82 (285)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH--H--HT-SEEEEEECCTTSHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH--h--cC-CcEEEEECCCCCHHHHHH
Confidence 44555 4556678888888654 23689999998763 2 222232 1 11 346677777543
Q ss_pred -----------eecccCCCCCccCCcc-ccchHHHHhhh--hHH---HHHHHHHhhcc--CCcEEEEEeC
Q psy7769 230 -----------VYSTCSLSPIQNDGVV-HMSLKRIWEET--GCE---IEIKHALKLVK--VGGSVVYSTC 280 (355)
Q Consensus 230 -----------lDaPCSgsG~t~~~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~Lk--pGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+.+.... ++. .+++.+++.++ .+|+||+.+.
T Consensus 83 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS 152 (285)
T 3sc4_A 83 AVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSP 152 (285)
T ss_dssp HHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence 5655555554322222 23333333222 222 67778888776 3578888654
No 452
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=56.02 E-value=69 Score=27.57 Aligned_cols=56 Identities=9% Similarity=-0.026 Sum_probs=35.5
Q ss_pred CCeEeeecccCcchHHHHHHhc-C-CCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL-Y-PDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~-~-~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +.-|.|+...+++..+ . ..+|++++.+..++ +.+.+. . .+ .++.++..|..
T Consensus 11 ~~~vl-VtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~ 70 (255)
T 1fmc_A 11 GKCAI-ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ--Q--LG-GQAFACRCDIT 70 (255)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHH--H--TT-CCEEEEECCTT
T ss_pred CCEEE-EECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH--H--hC-CceEEEEcCCC
Confidence 44555 5557788898888754 2 36799999998777 444444 1 11 24556666643
No 453
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=55.87 E-value=58 Score=28.84 Aligned_cols=36 Identities=11% Similarity=-0.046 Sum_probs=26.1
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV 203 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl 203 (355)
+.+|| +.-|.|+...+++..+ ...+|++++.+...+
T Consensus 5 ~k~vl-VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~ 42 (281)
T 3m1a_A 5 AKVWL-VTGASSGFGRAIAEAAVAAGDTVIGTARRTEAL 42 (281)
T ss_dssp CCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGG
T ss_pred CcEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 33444 5667888898888754 336899999998777
No 454
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=55.59 E-value=43 Score=29.57 Aligned_cols=109 Identities=12% Similarity=-0.004 Sum_probs=56.4
Q ss_pred CCeEeeeccc-CcchHHHHHHhc--CCCcEEEEcCCchhh-HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAA-PGGKTLVALQTL--YPDYYCMDGASLLPV-LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAg-PGgKT~~la~~~--~~g~V~AvD~s~~Rl-l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+||=.+++ .||...+++..+ ...+|++++.+...- ..+.+.. . .+ .+.++..|...
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~-~--~~--~~~~~~~D~~~~~~v~~~~~~~~~ 82 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAE-A--LG--GALLFRADVTQDEELDALFAGVKE 82 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHH-H--TT--CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH-h--cC--CcEEEECCCCCHHHHHHHHHHHHH
Confidence 5567766664 288888887643 236799999887522 1122210 1 11 13455555432
Q ss_pred ----eecccCCCCCccC----Ccc-ccchHHHHhhh--hHH---HHHHHHHhhccCCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQND----GVV-HMSLKRIWEET--GCE---IEIKHALKLVKVGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t~~----~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~LkpGG~lVYsTC 280 (355)
+|.-....|+... ..+ ..+.+...... ++. .+++.+.+.++.+|+||+.+.
T Consensus 83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 147 (261)
T 2wyu_A 83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTY 147 (261)
T ss_dssp HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEEC
T ss_pred HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 5555444443221 111 12233222221 122 677778887777789987653
No 455
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=55.53 E-value=77 Score=27.94 Aligned_cols=38 Identities=8% Similarity=-0.014 Sum_probs=27.1
Q ss_pred CCCeEeeecc-cCcchHHHHHHhc--CCCcEEEEcCCchhh
Q psy7769 166 PYDTVLDMCA-APGGKTLVALQTL--YPDYYCMDGASLLPV 203 (355)
Q Consensus 166 pG~~VLD~CA-gPGgKT~~la~~~--~~g~V~AvD~s~~Rl 203 (355)
.|.+||=.++ |.||...+++..+ ...+|++++.+..+.
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~ 46 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL 46 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH
Confidence 3556776676 4888888888654 336799999887653
No 456
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=55.36 E-value=30 Score=34.10 Aligned_cols=37 Identities=16% Similarity=0.368 Sum_probs=27.9
Q ss_pred HHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 260 IEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 260 ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
...+...+.+++|-.+|+ ..|+.|.-.+.+.+.+++.
T Consensus 110 ~~~~~i~~~l~~g~iVV~-~STV~pgtt~~v~~~i~e~ 146 (431)
T 3ojo_A 110 RALDSILPFLKKGNTIIV-ESTIAPKTMDDFVKPVIEN 146 (431)
T ss_dssp HHHHHHGGGCCTTEEEEE-CSCCCTTHHHHTHHHHHHT
T ss_pred HHHHHHHHhCCCCCEEEE-ecCCChhHHHHHHHHHHHH
Confidence 345667778898765555 4599999999998888874
No 457
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=55.00 E-value=75 Score=27.92 Aligned_cols=108 Identities=10% Similarity=-0.017 Sum_probs=58.6
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEeccee-------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|++++.+..++ +.+.+. . .+ .++.++..|...
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (262)
T 1zem_A 7 GKVCL-VTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVR--E--KG-VEARSYVCDVTSEEAVIGTVDSVVR 80 (262)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--T--TT-SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 44555 5566788888888654 336799999998877 544444 2 12 245666666532
Q ss_pred ----eecccCCCCCc-cCCcc-ccchHHHHhhh--hHH---HHHHHHHhhcc--CCcEEEEEeC
Q psy7769 230 ----VYSTCSLSPIQ-NDGVV-HMSLKRIWEET--GCE---IEIKHALKLVK--VGGSVVYSTC 280 (355)
Q Consensus 230 ----lDaPCSgsG~t-~~~~l-~~~~~~l~~l~--~lQ---~lL~~A~~~Lk--pGG~lVYsTC 280 (355)
+|.-....|+. ....+ ..+.+...... ++. .+++.+.+.++ .+|+||+.+.
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS 144 (262)
T 1zem_A 81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTAS 144 (262)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 45544444432 11121 22333322221 111 55666666553 3578888643
No 458
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=54.95 E-value=82 Score=27.96 Aligned_cols=108 Identities=15% Similarity=0.048 Sum_probs=56.1
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcC-Cchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGA-SLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~-s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|..|| +.-|.||...+++..+ ...+|+.++. +..++ +.+.+. . .+ .++.++..|...
T Consensus 28 ~k~vl-VTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 28 DRIAL-VTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIA--A--AG-GEAFAVKADVSQESEVEALFAAVI 101 (269)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--H--TT-CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH--h--cC-CcEEEEECCCCCHHHHHHHHHHHH
Confidence 44455 4556788888887654 2367888887 55555 444444 1 12 245666666543
Q ss_pred -----eecccCCCCCccCCc-cccchHHHHhhhh--HH---HHHHHHHhhc--cCCcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQNDGV-VHMSLKRIWEETG--CE---IEIKHALKLV--KVGGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~L--kpGG~lVYsTC 280 (355)
+|.-....|+..... ...+.+....... +. .+++.+++.+ +.+|+||+.+.
T Consensus 102 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS 165 (269)
T 4dmm_A 102 ERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIAS 165 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECc
Confidence 555544445332222 1223333322221 11 5566666655 34678888653
No 459
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=54.81 E-value=76 Score=28.14 Aligned_cols=32 Identities=13% Similarity=-0.006 Sum_probs=22.0
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCC
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGAS 199 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s 199 (355)
|.+|| +.-|.||...+++..+ ...+|+.+|.+
T Consensus 10 ~k~~l-VTGas~gIG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 10 GKTAL-ITGGARGMGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 54555 4556678888887654 33689999986
No 460
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=54.47 E-value=14 Score=34.51 Aligned_cols=40 Identities=13% Similarity=-0.053 Sum_probs=27.2
Q ss_pred hCCCCCCeEeeecc-c-CcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCA-A-PGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CA-g-PGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
..+++|++||=.+| | -|..++++|... ..+|+++ .++.++
T Consensus 146 ~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~ 187 (343)
T 3gaz_A 146 AQVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDL 187 (343)
T ss_dssp TCCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHH
T ss_pred cCCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHH
Confidence 35789999998874 2 233344555544 3689999 888887
No 461
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=54.39 E-value=82 Score=27.29 Aligned_cols=56 Identities=9% Similarity=-0.047 Sum_probs=34.3
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcC-Cchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGA-SLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~-s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +.-|.|+...+++..+ ...+|++++. +...+ +.+.+. . .+ .++.++..|..
T Consensus 7 ~k~vl-ITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~--~--~~-~~~~~~~~D~~ 67 (261)
T 1gee_A 7 GKVVV-ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK--K--VG-GEAIAVKGDVT 67 (261)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--H--TT-CEEEEEECCTT
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH--h--cC-CceEEEECCCC
Confidence 44555 4556788888888643 3367999998 76665 444443 1 12 24566666653
No 462
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=54.38 E-value=58 Score=29.19 Aligned_cols=109 Identities=11% Similarity=0.057 Sum_probs=57.0
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcC-Cchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGA-SLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~-s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|.+|| +.-|.||...+++..+ ...+|+.+|. +...+ +...+. . ....++.++..|...
T Consensus 25 ~k~~l-VTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 25 TKTAV-ITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVA--G--LSSGTVLHHPADMTKPSEIADMMAMVA 99 (281)
T ss_dssp TCEEE-EETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHH--T--TCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHh--h--ccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 44555 4556778888888654 3368999998 45555 444443 1 112346666666543
Q ss_pred -----eecccCCCCCccCCcc-ccchHHHHhhhh--HH---HHHHHHHhhcc--CCcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQNDGVV-HMSLKRIWEETG--CE---IEIKHALKLVK--VGGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lk--pGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+....... +. .+++.+++.++ .+|+||+.+.
T Consensus 100 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS 163 (281)
T 3v2h_A 100 DRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIAS 163 (281)
T ss_dssp HHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 5555544453322222 123333322211 11 56666666553 3478887543
No 463
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=54.35 E-value=86 Score=27.23 Aligned_cols=106 Identities=11% Similarity=0.035 Sum_probs=54.7
Q ss_pred eEeeecccCcchHHHHHHhc--CCCcEEEEcCC-chhh--HHhhccccccccCcceEEEEEeccee--------------
Q psy7769 169 TVLDMCAAPGGKTLVALQTL--YPDYYCMDGAS-LLPV--LALNIRPYDTVLDIHALKLVKVGGSV-------------- 229 (355)
Q Consensus 169 ~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s-~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~-------------- 229 (355)
+|| +.-|.||...+++..+ ...+|+.++.. ..++ +.+.++ . .+ .++.++..|...
T Consensus 6 ~~l-VTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 6 SAL-VTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIK--A--KG-VDSFAIQANVADADEVKAMIKEVVSQ 79 (246)
T ss_dssp EEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--H--TT-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred EEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH--h--cC-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 344 5666788888888653 23678787764 4554 444444 1 12 245666666532
Q ss_pred ---eecccCCCCCccCCc-cccchHHHHhhh--hHH---HHHHHHHhhc--cCCcEEEEEeC
Q psy7769 230 ---VYSTCSLSPIQNDGV-VHMSLKRIWEET--GCE---IEIKHALKLV--KVGGSVVYSTC 280 (355)
Q Consensus 230 ---lDaPCSgsG~t~~~~-l~~~~~~l~~l~--~lQ---~lL~~A~~~L--kpGG~lVYsTC 280 (355)
+|.-....|+..... ...+.+...... ++. .+++.+++.+ +.+|+||+.+.
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS 141 (246)
T 3osu_A 80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSS 141 (246)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 555544445332222 122333322221 111 5666666654 35678888654
No 464
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=54.19 E-value=16 Score=34.20 Aligned_cols=40 Identities=23% Similarity=0.056 Sum_probs=25.7
Q ss_pred hCCCCCCeEeeecccCcchH---HHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAPGGKT---LVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT---~~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||=.+|+ |+.. .++|...+..+|++.+ +..+.
T Consensus 138 ~~~~~g~~VlV~Ga~-G~vG~~a~qla~~~g~~~V~~~~-~~~~~ 180 (349)
T 4a27_A 138 ANLREGMSVLVHSAG-GGVGQAVAQLCSTVPNVTVFGTA-STFKH 180 (349)
T ss_dssp SCCCTTCEEEESSTT-SHHHHHHHHHHTTSTTCEEEEEE-CGGGH
T ss_pred cCCCCCCEEEEEcCC-cHHHHHHHHHHHHcCCcEEEEeC-CHHHH
Confidence 467899999987773 3333 3444444346788888 55555
No 465
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=54.02 E-value=1.2e+02 Score=27.50 Aligned_cols=107 Identities=9% Similarity=-0.051 Sum_probs=59.7
Q ss_pred CCCeEeeecccCcchHHHHHHh---c----CCCcEEEEc-----CCch----------------------hh-----HHh
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQT---L----YPDYYCMDG-----ASLL----------------------PV-----LAL 206 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~---~----~~g~V~AvD-----~s~~----------------------Rl-----l~~ 206 (355)
|| .|++++..-|+-+..++.+ + ...+|+++| .... .+ ..+
T Consensus 70 pG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 70 PG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp CS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 55 9999999999988887753 1 247899999 2210 01 112
Q ss_pred hccccccccCc--ceEEEEEeccee-eecccCCCCCccCCc-cccchHHHHhhhhHHHHHHHHHhhccCCcEEEEEeCC
Q psy7769 207 NIRPYDTVLDI--HALKLVKVGGSV-VYSTCSLSPIQNDGV-VHMSLKRIWEETGCEIEIKHALKLVKVGGSVVYSTCS 281 (355)
Q Consensus 207 ~l~r~~~~~g~--~~v~~~~~Da~~-lDaPCSgsG~t~~~~-l~~~~~~l~~l~~lQ~lL~~A~~~LkpGG~lVYsTCS 281 (355)
+.++ .+. .+++++.+++.. +..-..... ...-. ++.+.+ . .......++.++..|+|||.||+=...
T Consensus 149 ~~~~----~g~~~~~i~li~G~~~dTL~~~l~~~~-~~~~dlv~ID~D-~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 149 CSDF----FGHVTQRSVLVEGDVRETVPRYLAENP-QTVIALAYFDLD-L--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TTST----TTTSCCSEEEEESCHHHHHHHHHHHCT-TCCEEEEEECCC-C--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhh----cCCCCCcEEEEEecHHHHHHHHHHhCC-CCceEEEEEcCc-c--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 2332 222 678999888754 111000000 00001 111111 1 011115688999999999999988763
No 466
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=53.93 E-value=77 Score=28.16 Aligned_cols=37 Identities=14% Similarity=0.089 Sum_probs=26.0
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV 203 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl 203 (355)
.|.+|| +.-|.||...+++..+ ...+|+.+|.+..++
T Consensus 26 ~gk~vl-VTGas~gIG~aia~~la~~G~~V~~~~r~~~~~ 64 (266)
T 3grp_A 26 TGRKAL-VTGATGGIGEAIARCFHAQGAIVGLHGTREDKL 64 (266)
T ss_dssp TTCEEE-ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 355555 4556778888887654 336899999988877
No 467
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=53.86 E-value=24 Score=33.04 Aligned_cols=41 Identities=20% Similarity=0.045 Sum_probs=28.3
Q ss_pred hCCCCCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl 203 (355)
.++++|++||-.+| .|+....+++.. ...+|+++|.++.++
T Consensus 158 ~~~~~g~~vlV~Ga-~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~ 200 (354)
T 2j8z_A 158 GNVQAGDYVLIHAG-LSGVGTAAIQLTRMAGAIPLVTAGSQKKL 200 (354)
T ss_dssp SCCCTTCEEEESST-TSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred cCCCCCCEEEEECC-ccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 35789999998764 344554444322 236899999999888
No 468
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=53.66 E-value=34 Score=31.40 Aligned_cols=40 Identities=15% Similarity=-0.008 Sum_probs=25.2
Q ss_pred hCCCCCCeEeeec-cc-CcchHHHHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMC-AA-PGGKTLVALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~C-Ag-PGgKT~~la~~~~~g~V~AvD~s~~Rl 203 (355)
..+++|++||=.+ +| -|..+.++|...+ .+|++++ +..++
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G-a~vi~~~-~~~~~ 189 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQKG-TTVITTA-SKRNH 189 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEE-CHHHH
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcC-CEEEEEe-ccchH
Confidence 4689999999764 22 2333445555543 5899887 44555
No 469
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=53.11 E-value=72 Score=27.70 Aligned_cols=42 Identities=10% Similarity=-0.110 Sum_probs=28.4
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhcc
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
|.+|| +.-|.|+...+++..+ ...+|++++.+...+ +.+.+.
T Consensus 7 ~k~vl-ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 52 (264)
T 2pd6_A 7 SALAL-VTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLG 52 (264)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC-
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHH
Confidence 44555 5566788888888643 236899999998877 444443
No 470
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=52.80 E-value=64 Score=28.18 Aligned_cols=36 Identities=14% Similarity=-0.021 Sum_probs=25.6
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV 203 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl 203 (355)
|.+|| +.-|.||...+++..+ ...+|+.+|.+..++
T Consensus 6 gk~vl-VTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~ 43 (247)
T 3rwb_A 6 GKTAL-VTGAAQGIGKAIAARLAADGATVIVSDINAEGA 43 (247)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 44555 4556778888887654 336899999998877
No 471
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=52.46 E-value=95 Score=26.87 Aligned_cols=56 Identities=14% Similarity=0.042 Sum_probs=33.9
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcC-Cchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGA-SLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~-s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +.-|.||...+++..+ ...+|++++. ++.++ +.+.++ . .+ .++.++..|..
T Consensus 4 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~ 64 (246)
T 2uvd_A 4 GKVAL-VTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIK--K--LG-SDAIAVRADVA 64 (246)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--H--TT-CCEEEEECCTT
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH--h--cC-CcEEEEEcCCC
Confidence 44455 5567788888888654 2367999888 77666 444443 1 12 23556666653
No 472
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=52.46 E-value=46 Score=29.36 Aligned_cols=35 Identities=9% Similarity=-0.149 Sum_probs=24.0
Q ss_pred CCCeEeeecccC-cchHHHHHHhc--CCCcEEEEcCCc
Q psy7769 166 PYDTVLDMCAAP-GGKTLVALQTL--YPDYYCMDGASL 200 (355)
Q Consensus 166 pG~~VLD~CAgP-GgKT~~la~~~--~~g~V~AvD~s~ 200 (355)
.|.+||=.+++. ||...+++..+ ...+|++++.+.
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 355677666542 88888888643 236799998877
No 473
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=52.45 E-value=8.4 Score=43.49 Aligned_cols=44 Identities=18% Similarity=0.005 Sum_probs=33.6
Q ss_pred CCCeEeeecccCcchHHHHHHhcCCCcEEEEcCCchhh--HHhhcc
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTLYPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
...+|+|++||.||.+..+-+.+..-.|.|+|+++..+ .+.|..
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p 895 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP 895 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC
Confidence 34589999999999998876653112488999999988 666653
No 474
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=52.39 E-value=71 Score=28.86 Aligned_cols=56 Identities=7% Similarity=-0.112 Sum_probs=34.4
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|..|| +.-|.||...+++..+ ...+|++++.++.++ +.+.+. . .+ .++.++..|..
T Consensus 34 ~k~vl-VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~--~--~~-~~~~~~~~Dv~ 93 (291)
T 3cxt_A 34 GKIAL-VTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYK--A--AG-INAHGYVCDVT 93 (291)
T ss_dssp TCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH--H--TT-CCCEEEECCTT
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CeEEEEEecCC
Confidence 54555 5556788888888644 236899999998777 444443 1 11 23455566643
No 475
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=52.38 E-value=58 Score=29.10 Aligned_cols=42 Identities=12% Similarity=-0.009 Sum_probs=28.9
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhcc
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIR 209 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~ 209 (355)
|..|| +.-|.||...+++..+ ...+|+++|.+..++ +.+.+.
T Consensus 29 ~k~vl-VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~ 74 (276)
T 2b4q_A 29 GRIAL-VTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLS 74 (276)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHT
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 44555 5556788888888654 336899999998877 444444
No 476
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=52.12 E-value=83 Score=27.21 Aligned_cols=56 Identities=9% Similarity=0.033 Sum_probs=35.7
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +.-|.|+...+++..+ ...+|++++.+..++ +.+.++ . .+ .++.++..|..
T Consensus 13 ~k~vl-ItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~--~--~~-~~~~~~~~D~~ 72 (260)
T 3awd_A 13 NRVAI-VTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLR--M--EG-HDVSSVVMDVT 72 (260)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TT-CCEEEEECCTT
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CceEEEEecCC
Confidence 44566 4556788888888654 336899999998776 444443 1 11 24566666653
No 477
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=52.12 E-value=83 Score=28.08 Aligned_cols=61 Identities=7% Similarity=-0.005 Sum_probs=36.0
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +.-|.|+.+.+++..+ ...+|++++.+..++ +.+.+..........++.++..|..
T Consensus 18 ~k~vl-VTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~ 82 (303)
T 1yxm_A 18 GQVAI-VTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIR 82 (303)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTT
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCC
Confidence 55666 4556788888888654 336899999998777 4444431000001134677777754
No 478
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=52.08 E-value=72 Score=28.31 Aligned_cols=56 Identities=4% Similarity=-0.009 Sum_probs=36.7
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG 227 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da 227 (355)
|.+|| +.-|.||.+.+++..+ ...+|++++.+..++ +.+.+. . .+..++.++..|.
T Consensus 12 ~k~vl-ITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~--~--~~~~~~~~~~~Dl 71 (311)
T 3o26_A 12 RRCAV-VTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLK--N--SNHENVVFHQLDV 71 (311)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--T--TTCCSEEEEECCT
T ss_pred CcEEE-EecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cCCCceEEEEccC
Confidence 44555 5666788888888654 346899999999887 444454 2 2223566766664
No 479
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=51.84 E-value=87 Score=26.92 Aligned_cols=56 Identities=11% Similarity=0.064 Sum_probs=35.5
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCC-chhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGAS-LLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s-~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +.-|.|+...+++..+ ...+|++++.+ +..+ +.+.+. . .+ .++.++..|..
T Consensus 7 ~k~vl-VTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~ 67 (258)
T 3afn_B 7 GKRVL-ITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMR--A--DG-GDAAFFAADLA 67 (258)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHH--H--TT-CEEEEEECCTT
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHH--h--cC-CceEEEECCCC
Confidence 55666 5566788888888654 23679999988 6666 444443 1 11 34666666653
No 480
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=51.60 E-value=92 Score=27.38 Aligned_cols=36 Identities=6% Similarity=-0.081 Sum_probs=25.4
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV 203 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl 203 (355)
|.+|| +.-|.||...+++..+ ...+|++++.+..++
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 44 (260)
T 1nff_A 7 GKVAL-VSGGARGMGASHVRAMVAEGAKVVFGDILDEEG 44 (260)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 44555 4556788888887643 336899999988776
No 481
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=51.28 E-value=79 Score=28.17 Aligned_cols=57 Identities=7% Similarity=-0.028 Sum_probs=34.9
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +.-|.|+.+.+++..+ ...+|++++.+..++ +.+.+. . ....++.++..|..
T Consensus 26 ~k~vl-ITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~--~--~~~~~~~~~~~Dl~ 86 (302)
T 1w6u_A 26 GKVAF-ITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS--S--QTGNKVHAIQCDVR 86 (302)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--HHSSCEEEEECCTT
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--H--hcCCceEEEEeCCC
Confidence 44555 4556788888887643 236799999998777 444443 1 00124666777754
No 482
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=51.16 E-value=89 Score=26.68 Aligned_cols=31 Identities=13% Similarity=0.031 Sum_probs=23.2
Q ss_pred ecccCcchHHHHHHhc--CCCcEEEEcCCchhh
Q psy7769 173 MCAAPGGKTLVALQTL--YPDYYCMDGASLLPV 203 (355)
Q Consensus 173 ~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl 203 (355)
+.-|.||...+++..+ ...+|++++.+..++
T Consensus 6 VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~ 38 (230)
T 3guy_A 6 ITGASSGLGAELAKLYDAEGKATYLTGRSESKL 38 (230)
T ss_dssp EESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred EecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4556788888887643 336899999998887
No 483
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=50.20 E-value=96 Score=26.54 Aligned_cols=37 Identities=16% Similarity=0.015 Sum_probs=26.3
Q ss_pred CCCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh
Q psy7769 166 PYDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV 203 (355)
Q Consensus 166 pG~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl 203 (355)
+|.+|| +.-|.|+...++++.+ ...+|++++.+..++
T Consensus 6 ~~k~vl-ITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~ 44 (244)
T 3d3w_A 6 AGRRVL-VTGAGKGIGRGTVQALHATGARVVAVSRTQADL 44 (244)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCcEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 355555 5566788888888654 236799999988776
No 484
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=49.95 E-value=1.3e+02 Score=26.68 Aligned_cols=108 Identities=15% Similarity=-0.030 Sum_probs=55.1
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh-HHhhccccccccCcceEEEEEeccee--------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV-LALNIRPYDTVLDIHALKLVKVGGSV-------------- 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl-l~~~l~r~~~~~g~~~v~~~~~Da~~-------------- 229 (355)
|.+|| +.-|.||...+++..+ ...+|+++|.+.... +.+.+. . .+ .++.++..|...
T Consensus 31 gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (273)
T 3uf0_A 31 GRTAV-VTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIA--D--GG-GSAEAVVADLADLEGAANVAEELAAT 104 (273)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHH--T--TT-CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHH--h--cC-CcEEEEEecCCCHHHHHHHHHHHHhc
Confidence 54555 4556677888887644 336799998554332 444443 1 12 346666666543
Q ss_pred --eecccCCCCCccCCcc-ccchHHHHhhhh--HH---HHHHHHHhhc--cCCcEEEEEeC
Q psy7769 230 --VYSTCSLSPIQNDGVV-HMSLKRIWEETG--CE---IEIKHALKLV--KVGGSVVYSTC 280 (355)
Q Consensus 230 --lDaPCSgsG~t~~~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~L--kpGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+....... +. .+++.++..+ +.+|+||+.+.
T Consensus 105 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS 165 (273)
T 3uf0_A 105 RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIAS 165 (273)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcc
Confidence 4554444453322221 223333322221 11 4556665554 24578887654
No 485
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=49.44 E-value=8.6 Score=36.03 Aligned_cols=38 Identities=18% Similarity=0.321 Sum_probs=27.9
Q ss_pred hHHHHHHHHHhhccCCcEEEEEeCCCCCCCCHHHHHHHHHh
Q psy7769 257 GCEIEIKHALKLVKVGGSVVYSTCSLSPIQNDGVVHMSLKR 297 (355)
Q Consensus 257 ~lQ~lL~~A~~~LkpGG~lVYsTCSl~~~ENE~vV~~~L~~ 297 (355)
.+.+.|..|..+|+|||+|+..| ++..|. -.|+.+++.
T Consensus 211 ~L~~~L~~a~~~L~~gGrl~vis--fHSLED-RiVK~~~~~ 248 (285)
T 1wg8_A 211 ALKEFLEQAAEVLAPGGRLVVIA--FHSLED-RVVKRFLRE 248 (285)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEE--CSHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEe--cCcHHH-HHHHHHHHh
Confidence 33389999999999999997643 444454 677777764
No 486
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=49.08 E-value=94 Score=27.62 Aligned_cols=56 Identities=11% Similarity=-0.042 Sum_probs=34.8
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +.-|.||...+++..+ ...+|++++.++.++ +.+.++ . .+ .++.++..|..
T Consensus 22 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~--~--~~-~~~~~~~~Dv~ 81 (277)
T 2rhc_B 22 SEVAL-VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR--E--AG-VEADGRTCDVR 81 (277)
T ss_dssp SCEEE-EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TT-CCEEEEECCTT
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CceEEEECCCC
Confidence 44555 4556788888887643 236899999998877 444443 1 12 23566666653
No 487
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=48.92 E-value=97 Score=27.41 Aligned_cols=55 Identities=9% Similarity=-0.077 Sum_probs=33.9
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecc
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGG 227 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da 227 (355)
|.+|| +.-|.||...+++..+ ...+|++++.++.++ +.+.+. . .+ .++.++..|.
T Consensus 21 ~k~vl-VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~-~~~~~~~~D~ 79 (273)
T 1ae1_A 21 GTTAL-VTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR--E--KG-LNVEGSVCDL 79 (273)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TT-CCEEEEECCT
T ss_pred CCEEE-EECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cC-CceEEEECCC
Confidence 44555 4556788888887653 236899999998877 444443 1 12 2355666664
No 488
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=48.68 E-value=86 Score=27.69 Aligned_cols=108 Identities=18% Similarity=0.133 Sum_probs=57.2
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCC-chhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGAS-LLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s-~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
|.+|| +.-|.||...+++..+ ...+|++++.+ .... +.+.++ . .+ .++.++..|...
T Consensus 29 ~k~vl-ITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~--~~-~~~~~~~~D~~~~~~v~~~~~~~~ 102 (271)
T 4iin_A 29 GKNVL-ITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELE--E--KG-YKAAVIKFDAASESDFIEAIQTIV 102 (271)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--H--TT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH--h--cC-CceEEEECCCCCHHHHHHHHHHHH
Confidence 54555 5566788888887643 33679999885 4433 444444 2 12 346677777543
Q ss_pred -----eecccCCCCCccCCc-cccchHHHHhhhh--HH---HHHHHHHhhcc--CCcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQNDGV-VHMSLKRIWEETG--CE---IEIKHALKLVK--VGGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~-l~~~~~~l~~l~~--lQ---~lL~~A~~~Lk--pGG~lVYsTC 280 (355)
+|.-....|+..... ...+.+....... +. .+++.+++.++ ..|+||+.+.
T Consensus 103 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS 166 (271)
T 4iin_A 103 QSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVAS 166 (271)
T ss_dssp HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 555544455333222 2233333332221 11 45566666554 3478888654
No 489
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=48.57 E-value=1e+02 Score=27.07 Aligned_cols=58 Identities=14% Similarity=0.001 Sum_probs=35.0
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|..|| +.-|.||...+++..+ ...+|++++.+..++ +.+.+. ....+ .++.++..|..
T Consensus 13 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~-~~~~~~~~D~~ 74 (267)
T 1iy8_A 13 DRVVL-ITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVL--ETAPD-AEVLTTVADVS 74 (267)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--HHCTT-CCEEEEECCTT
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--hhcCC-ceEEEEEccCC
Confidence 44555 4556788888887654 336899999998877 444443 10001 24566666653
No 490
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=48.54 E-value=1.1e+02 Score=26.99 Aligned_cols=108 Identities=14% Similarity=0.017 Sum_probs=54.2
Q ss_pred CCeEeeecccCcchHHHHHHhc-C-CCcEEEEcC-Cchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL-Y-PDYYCMDGA-SLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~-~-~g~V~AvD~-s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
+..|| +.-|.||...+++..+ . ..+|++++. +...+ +...+. . .+ .++.++..|...
T Consensus 25 ~k~vl-ITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dl~~~~~v~~~~~~~~ 98 (269)
T 3gk3_A 25 KRVAF-VTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHER--D--AG-RDFKAYAVDVADFESCERCAEKVL 98 (269)
T ss_dssp CCEEE-ETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHH--T--TT-CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHH--h--cC-CceEEEEecCCCHHHHHHHHHHHH
Confidence 44455 5666788888888654 2 357888884 44433 323332 1 11 345666666533
Q ss_pred -----eecccCCCCCccCCcc-ccchHHHHhhhh--HH---HHHHHHHhhc--cCCcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQNDGVV-HMSLKRIWEETG--CE---IEIKHALKLV--KVGGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~L--kpGG~lVYsTC 280 (355)
+|.-....|+.....+ ..+.+....... +. .+++.++..+ +.+|+||+.+.
T Consensus 99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS 162 (269)
T 3gk3_A 99 ADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGS 162 (269)
T ss_dssp HHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 5555444443322221 123333222211 11 5566666554 34588888654
No 491
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=48.17 E-value=24 Score=33.12 Aligned_cols=40 Identities=13% Similarity=-0.007 Sum_probs=29.9
Q ss_pred hCCCCCCeEeeecccCcchHH---HHHHhcCCCcEEEEcCCchhh
Q psy7769 162 LNIRPYDTVLDMCAAPGGKTL---VALQTLYPDYYCMDGASLLPV 203 (355)
Q Consensus 162 L~~~pG~~VLD~CAgPGgKT~---~la~~~~~g~V~AvD~s~~Rl 203 (355)
.++++|++||=.+|| +... ++|......+|+++|.++.++
T Consensus 182 ~~~~~g~~VlV~GaG--~vG~~avqlak~~~Ga~Vi~~~~~~~~~ 224 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVG--GLGHIAVQLLKVMTPATVIALDVKEEKL 224 (359)
T ss_dssp TTCCTTCEEEEECCS--HHHHHHHHHHHHHCCCEEEEEESSHHHH
T ss_pred cCCCCCCEEEEECCC--HHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence 578899999998874 4444 455544136899999999888
No 492
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=48.12 E-value=1.2e+02 Score=26.29 Aligned_cols=36 Identities=11% Similarity=0.034 Sum_probs=25.5
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV 203 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl 203 (355)
|.+|| +.-|.||...+++..+ ...+|++++.+..++
T Consensus 6 ~k~vl-VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~ 43 (253)
T 1hxh_A 6 GKVAL-VTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG 43 (253)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 44454 5556788888888654 236799999988776
No 493
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=47.73 E-value=1.3e+02 Score=26.26 Aligned_cols=57 Identities=9% Similarity=0.067 Sum_probs=34.8
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
|.+|| +.-|.||...+++..+ ...+|++++.+..++ +.+.+. .. .+ .++.++..|..
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~--~~-~~-~~~~~~~~D~~ 67 (263)
T 3ai3_A 7 GKVAV-ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLK--EK-FG-VRVLEVAVDVA 67 (263)
T ss_dssp TCEEE-EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--HH-HC-CCEEEEECCTT
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH--Hh-cC-CceEEEEcCCC
Confidence 44555 5566788888888654 336899999998777 444443 10 01 23566666653
No 494
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=47.25 E-value=1.2e+02 Score=26.22 Aligned_cols=36 Identities=8% Similarity=-0.113 Sum_probs=25.1
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV 203 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl 203 (355)
|.+|| +.-|.||...+++..+ ...+|++++.+..++
T Consensus 9 ~k~vl-ITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~ 46 (261)
T 3n74_A 9 GKVAL-ITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGA 46 (261)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 44555 4555677787777643 336899999998887
No 495
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=46.96 E-value=1.2e+02 Score=27.31 Aligned_cols=57 Identities=11% Similarity=0.059 Sum_probs=35.8
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCc--ceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDI--HALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~--~~v~~~~~Da~ 228 (355)
|..|| +.-|.||...+++..+ ...+|++++.+..++ +...+. . .+. .++.++..|..
T Consensus 26 ~k~vl-VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~--~--~~~~~~~~~~~~~Dv~ 88 (297)
T 1xhl_A 26 GKSVI-ITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL--K--AGVPAEKINAVVADVT 88 (297)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TTCCGGGEEEEECCTT
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--h--cCCCCceEEEEecCCC
Confidence 44555 5566788888888654 336899999998877 444443 1 111 14666666653
No 496
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=46.88 E-value=1.5e+02 Score=26.01 Aligned_cols=108 Identities=14% Similarity=0.068 Sum_probs=56.3
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEE-cCCchhh--HHhhccccccccCcceEEEEEeccee------------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMD-GASLLPV--LALNIRPYDTVLDIHALKLVKVGGSV------------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~Av-D~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~~------------ 229 (355)
+..|| +.-|.||...+++..+ ...+|+.+ +.+...+ +.+.+. . .+ .++.++..|...
T Consensus 26 ~k~vl-ITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dl~~~~~v~~~~~~~~ 99 (272)
T 4e3z_A 26 TPVVL-VTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAIT--E--SG-GEAVAIPGDVGNAADIAAMFSAVD 99 (272)
T ss_dssp SCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--H--TT-CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHH--h--cC-CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 44455 5666788888888654 23567565 6666666 444444 2 11 356777777543
Q ss_pred -----eecccCCCCCccC-Ccc-ccchHHHHhhhh--HH---HHHHHHHhhcc-----CCcEEEEEeC
Q psy7769 230 -----VYSTCSLSPIQND-GVV-HMSLKRIWEETG--CE---IEIKHALKLVK-----VGGSVVYSTC 280 (355)
Q Consensus 230 -----lDaPCSgsG~t~~-~~l-~~~~~~l~~l~~--lQ---~lL~~A~~~Lk-----pGG~lVYsTC 280 (355)
+|.-....|+... ..+ ..+.+....... +. .+++.+++.++ .+|+||+.+.
T Consensus 100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS 167 (272)
T 4e3z_A 100 RQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSS 167 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred HhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcc
Confidence 5555544453222 211 123333222211 11 45566666554 3688888654
No 497
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=46.49 E-value=1.3e+02 Score=26.60 Aligned_cols=57 Identities=12% Similarity=0.054 Sum_probs=35.7
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCc--ceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDI--HALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~--~~v~~~~~Da~ 228 (355)
|.+|| +.-|.||...+++..+ ...+|++++.+..++ +.+.+. . .+. .++.++..|..
T Consensus 6 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~~~~~~~~~~~~Dv~ 68 (280)
T 1xkq_A 6 NKTVI-ITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIIL--K--SGVSEKQVNSVVADVT 68 (280)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--T--TTCCGGGEEEEECCTT
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH--H--cCCCCcceEEEEecCC
Confidence 44444 5556788888887653 336899999998877 544444 1 121 14666776754
No 498
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=46.19 E-value=96 Score=27.51 Aligned_cols=108 Identities=9% Similarity=-0.056 Sum_probs=57.4
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh---------HHhhccccccccCcceEEEEEeccee------
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV---------LALNIRPYDTVLDIHALKLVKVGGSV------ 229 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl---------l~~~l~r~~~~~g~~~v~~~~~Da~~------ 229 (355)
|..|| +.-|.||...+++..+ ...+|+.++.+..++ +...+. . .+ .++.++..|...
T Consensus 6 ~k~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~~Dv~~~~~v~~ 79 (274)
T 3e03_A 6 GKTLF-ITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN--A--AG-GQGLALKCDIREEDQVRA 79 (274)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHH--H--HT-SEEEEEECCTTCHHHHHH
T ss_pred CcEEE-EECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHH--h--cC-CeEEEEeCCCCCHHHHHH
Confidence 44555 4556688888887643 336899999887642 222222 1 11 346677777543
Q ss_pred -----------eecccCCCCCccCCc-cccchHHHHhhh--hHH---HHHHHHHhhcc--CCcEEEEEeC
Q psy7769 230 -----------VYSTCSLSPIQNDGV-VHMSLKRIWEET--GCE---IEIKHALKLVK--VGGSVVYSTC 280 (355)
Q Consensus 230 -----------lDaPCSgsG~t~~~~-l~~~~~~l~~l~--~lQ---~lL~~A~~~Lk--pGG~lVYsTC 280 (355)
+|.-....|+..... ...+.+.+.... ++. .+.+.++..++ .+|+||+.+.
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS 149 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAP 149 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECC
Confidence 565554555433333 223333332221 222 56677777663 3578887543
No 499
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=45.97 E-value=1.4e+02 Score=26.45 Aligned_cols=53 Identities=11% Similarity=0.061 Sum_probs=34.3
Q ss_pred eEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCcceEEEEEecce
Q psy7769 169 TVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDIHALKLVKVGGS 228 (355)
Q Consensus 169 ~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~~~v~~~~~Da~ 228 (355)
.|| +.-|.||...+++..+ ...+|++++.+..++ +.+.+. . . .++.++..|..
T Consensus 23 ~vl-VTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~--~---~-~~~~~~~~Dv~ 79 (272)
T 2nwq_A 23 TLF-ITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELS--A---K-TRVLPLTLDVR 79 (272)
T ss_dssp EEE-ESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT--T---T-SCEEEEECCTT
T ss_pred EEE-EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--c---C-CcEEEEEcCCC
Confidence 444 5667788888887643 336899999998877 544444 1 1 24566666653
No 500
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=45.81 E-value=1.3e+02 Score=26.45 Aligned_cols=57 Identities=16% Similarity=0.040 Sum_probs=36.0
Q ss_pred CCeEeeecccCcchHHHHHHhc--CCCcEEEEcCCchhh--HHhhccccccccCc-ceEEEEEecce
Q psy7769 167 YDTVLDMCAAPGGKTLVALQTL--YPDYYCMDGASLLPV--LALNIRPYDTVLDI-HALKLVKVGGS 228 (355)
Q Consensus 167 G~~VLD~CAgPGgKT~~la~~~--~~g~V~AvD~s~~Rl--l~~~l~r~~~~~g~-~~v~~~~~Da~ 228 (355)
|..|| +.-|.|+.+.+++..+ ...+|++++.+..++ +...+. . .+. .++.++..|..
T Consensus 32 ~k~vl-VTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~--~~~~~~~~~~~~Dl~ 93 (279)
T 1xg5_A 32 DRLAL-VTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECK--S--AGYPGTLIPYRCDLS 93 (279)
T ss_dssp TCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH--H--TTCSSEEEEEECCTT
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHH--h--cCCCceEEEEEecCC
Confidence 44555 5556788888888643 336899999998877 544444 1 121 34666666653
Done!