BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy7771
         (193 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q32KH8|ARSH_CANFA Arylsulfatase H OS=Canis familiaris GN=ARSH PE=2 SV=1
          Length = 562

 Score = 35.0 bits (79), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 28  QPLYQNPRYSESTHPVRQNYISPSLRTTRRAAKPNQPTSYSHQTAEYYRPNYQPSGQNQY 87
            PL +  R S S H    +Y    L T    A+ +Q    +   A Y  P + P G    
Sbjct: 408 MPLLEG-RVSHSDHEFLFHYCGVYLHT----ARWHQKDCATVWKAHYVTPKFSPDGAGAC 462

Query: 88  YDPSYQPSNYQESYNPNPAAFKPSFDPSTFDPAN 121
           Y     P +   +Y+  P  F  S DPS   P N
Sbjct: 463 YGSGICPCSGDVTYHDPPLLFDVSRDPSETRPLN 496


>sp|Q9LRZ0|TPR2_ARATH Topless-related protein 2 OS=Arabidopsis thaliana GN=TPR2 PE=1 SV=2
          Length = 1131

 Score = 33.5 bits (75), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 3/94 (3%)

Query: 27  RQPLYQNPRYSESTHPV-RQNYISPSLRTTRRAAKPNQPTSYSHQTAEYYRPNYQPSGQN 85
           R  +Y   +     +P+ R+    PS + +R     NQ  ++ HQ  +  RPN  P  + 
Sbjct: 140 RSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLINQSLNWQHQLCKNPRPN--PDIKT 197

Query: 86  QYYDPSYQPSNYQESYNPNPAAFKPSFDPSTFDP 119
            + D S  PSN   +  P          PS F P
Sbjct: 198 LFLDHSCSPSNGARALTPVNLPVAAVARPSNFVP 231


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.129    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,580,933
Number of Sequences: 539616
Number of extensions: 3921930
Number of successful extensions: 10105
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 277
Number of HSP's that attempted gapping in prelim test: 9231
Number of HSP's gapped (non-prelim): 726
length of query: 193
length of database: 191,569,459
effective HSP length: 111
effective length of query: 82
effective length of database: 131,672,083
effective search space: 10797110806
effective search space used: 10797110806
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)